BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020194
(329 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/330 (84%), Positives = 303/330 (91%), Gaps = 2/330 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN+ C DATVI+VDSVNKHGILLQV+QVL D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVID DG KIRDKEVI YIQ+RLE++ASFAPSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+G DRPGL SEVCAVLADL CNVVNAEIWTHN RAAAVVHVTD STG A+KDPKRLSTI
Sbjct: 121 LSGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK-AVGRVEDKSSR 239
KELL NVL+G +D + AK +LSPPGI +RERRLHQIMF DRDYERV++ +GR+EDKSSR
Sbjct: 181 KELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSR 240
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIR 298
P VTVLNIEKDY+VITMRSKDRPKLLFDIVCTLTDM+YVVFHGMVN GR EAYQEFYIR
Sbjct: 241 PHVTVLNIEKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAYQEFYIR 300
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
HVDGLPISS+AERERVIQCLEAAIERRASE
Sbjct: 301 HVDGLPISSDAERERVIQCLEAAIERRASE 330
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/329 (82%), Positives = 304/329 (92%), Gaps = 1/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EYAKLIRR+NPPRVVIDN+ C +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNV+D DGKKIRDKEV+DYIQ+RLE++ASFAPSLR SVGVMP+EEHT+IE
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLSTI
Sbjct: 121 LTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
+ELL NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKSSR
Sbjct: 181 RELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSR 240
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
P VTVLNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR EAYQEFYIRH
Sbjct: 241 PHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRH 300
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDGLP+SS+AERERV+QCLEAAIERRASE
Sbjct: 301 VDGLPVSSDAERERVVQCLEAAIERRASE 329
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
D TV+ + S ++ +L ++ L D+ V+ +S+ F + DG +
Sbjct: 251 DYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDA 310
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+ + Q LE A R+S G+ +E DR GL S++ + + +
Sbjct: 311 ERERVVQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDITRIFRENSLCIK 359
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
AEI T +A +VTD TG + DPK + +I
Sbjct: 360 RAEILTKGGKAKDTFYVTD-VTGNPV-DPKIIDSI 392
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/331 (82%), Positives = 304/331 (91%), Gaps = 3/331 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EYAKLIRR+NPPRVVIDN+ C +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ--RLETDASFAPSLRSSVGVMPTEEHTS 118
SSDG WFMDVFNV+D DGKKIRDKEV+DYIQ+ RLE++ASFAPSLR SVGVMP+EEHT+
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTA 120
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TGTDRPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLS
Sbjct: 121 IELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLS 180
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKS 237
TI+ELL NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKS
Sbjct: 181 TIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKS 240
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
SRP VTVLNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR EAYQEFYI
Sbjct: 241 SRPHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYI 300
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASE 328
RHVDGLP+SS+AERERV+QCLEAAIERRASE
Sbjct: 301 RHVDGLPVSSDAERERVVQCLEAAIERRASE 331
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
D TV+ + S ++ +L ++ L D+ V+ +S+ F + DG +
Sbjct: 253 DYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDA 312
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+ + Q LE A R+S G+ +E DR GL S++ + + +
Sbjct: 313 ERERVVQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDITRIFRENSLCIK 361
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
AEI T +A +VTD TG + DPK + +I
Sbjct: 362 RAEILTKGGKAKDTFYVTD-VTGNPV-DPKIIDSI 394
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/330 (79%), Positives = 294/330 (89%), Gaps = 4/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN+ +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV+D DG KIRDK VI+YI + LE DASF P +R +VGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVVDGDGNKIRDKGVINYITKTLERDASFVPPMRGTVGVMPSEDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNAEIWTHN RAAAVVHVTD STG AI+DP RLS I
Sbjct: 121 LSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
KELL NVL+G +D + AK +LSPPG +RERRLHQIMF DRDY+RVE+A +G+ DKSSR
Sbjct: 181 KELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGK--DKSSR 238
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VTVL+ IEKDYTVITMRSKDRPKLLFD VCTLTDMQYVVFHG+V+TGR EAYQE+YIR
Sbjct: 239 PHVTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYIR 298
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
HVDGLP+SS+AERERVI+CLEAAIERRASE
Sbjct: 299 HVDGLPMSSDAERERVIECLEAAIERRASE 328
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 36 NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ G+L + +V + +L IK+A IS++GG D F V D G + + ++ID I+Q++
Sbjct: 338 DRFGLLSDITRVFRENSLCIKRAEISTEGGKAKDTFYVTDVTGNPV-NPQIIDSIRQQI 395
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/332 (78%), Positives = 293/332 (88%), Gaps = 4/332 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSD WFMDVFNVID +G KIRDKEVIDYIQ+RLE + SFAPSLR SVGV+PTEEHT IE
Sbjct: 61 SSDAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSR 239
++LL NVLRG +D + A+T+LSPPG+ NR+RRLHQIMF DRDYER+E+A G + D+ R
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDRDKR 240
Query: 240 --PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P VTV++ +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T RTEA+QEFY
Sbjct: 241 PLPHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFY 300
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IRHVDG PISSEAERER++QCLEAAIERRASE
Sbjct: 301 IRHVDGFPISSEAERERLVQCLEAAIERRASE 332
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/333 (77%), Positives = 289/333 (86%), Gaps = 6/333 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNVID G KIRDKEVIDYIQ+RLE + SF PSLR SVGV+PTEEHT IE
Sbjct: 61 SSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE----DK 236
++LL NVLRG +D + A+T+LSP G+ NR+RRLHQIMF DRDYER+E+A G+ E DK
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERA-GQEELRDRDK 239
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P VTV + +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T R EA+QEF
Sbjct: 240 RPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEF 299
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
YIRHVDG PISSEAERER++QCLEAAIERRASE
Sbjct: 300 YIRHVDGFPISSEAERERLMQCLEAAIERRASE 332
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + D TV+ + + ++ +L ++ L D+ V+ + + F +
Sbjct: 243 PHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIR 302
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 303 HVDGFPISSEAERERLMQCLEA----AIERRASEGM-------GLELCTEDRVGLLSDIT 351
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ + AEI T +A +VTD TG + DPK + +I+
Sbjct: 352 RTFRENSLCIKRAEISTEEGKARDTFYVTD-VTGNPV-DPKIIDSIR 396
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/329 (77%), Positives = 284/329 (86%), Gaps = 1/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNV D +G KI+DKEVIDYIQ+RLE + SF S+R SVGV+PTEEHT IE
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVLADL CNVV AEIWTHN RAAAVVHVTD S+G AI+DP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++LL NVLRG DD + AKT+LS PG+ R+RRLHQIMF DRDYERVE+A R DK P
Sbjct: 181 RDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKGPFP 240
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + E+DYTV+ MR+KDRPKLLFDIVCTLTDMQYVVFHG+V T RT AYQEFYIRH
Sbjct: 241 HVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRH 300
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG PISSEAERER+IQCLEAAIERRASE
Sbjct: 301 VDGFPISSEAERERLIQCLEAAIERRASE 329
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + T D TV+ + + ++ +L ++ L D+ V+ + ++ F +
Sbjct: 240 PHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIR 299
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 300 HVDGFPISSEAERERLIQCLEA----AIERRASEGM-------ELELCTEDRVGLLSDIT 348
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + + AEI T N +A +VTD TG + DPK + +I+ + + +
Sbjct: 349 RIFRENSLCIKRAEISTENGKAKDTFYVTD-VTGNPV-DPKSIDSIRRQIGDTVLQV--- 403
Query: 195 RKAKTSLSP 203
K +SLSP
Sbjct: 404 -KHNSSLSP 411
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/329 (74%), Positives = 282/329 (85%), Gaps = 3/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRR+NPPRVVIDNN C DATVI+VDS+NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TI
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVLRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + EKDYT+IT R++DRPKLLFD++CTLTDM+YVVFHGMV TGR EA+ EFYIRH
Sbjct: 239 HVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIRH 298
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
DGLPISS+AER+RV+ CLEAAIERR SE
Sbjct: 299 KDGLPISSKAERDRVLHCLEAAIERRESE 327
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + T D T+I + ++ +L V+ L D+ V+ + + F +
Sbjct: 238 PHVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIR 297
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I K D + LE A R S G+ +E DR GL S++
Sbjct: 298 HKDGLPISSKAERDRVLHCLEA----AIERRESEGL-------KLELCAEDRVGLLSDIT 346
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ + + AEI T +A + +VTD TG I D K + +I++
Sbjct: 347 RIFRENSLCIRRAEIATKRGKAKDIFYVTD-MTGTTI-DAKVVESIRK 392
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/328 (76%), Positives = 279/328 (85%), Gaps = 6/328 (1%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIE 120
SDGGWFMDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+TSIE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIE 122
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ST AI DP RLSTI
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTI 182
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NV+R R AKT S +RERRLHQIMFDDRDYE V++A +SRP
Sbjct: 183 KELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----RTSASRP 237
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VT++NIEKDYTV+TMRSKDRPKL+FD+VCTLTDMQYVVFHGMV+T EAYQEFYIRHV
Sbjct: 238 SVTLMNIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHV 297
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DGLPI+SEAE+ERVIQCLEAAIERRASE
Sbjct: 298 DGLPINSEAEQERVIQCLEAAIERRASE 325
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D TV+ + S ++ ++ V+ L D+ V+ +S++ F + DG I
Sbjct: 243 NIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 302
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + Q LE A R+S G+ +E + DR GL S++ +
Sbjct: 303 NSEAEQERVIQCLEA----AIERRASEGL-------ELELSAEDRVGLLSDITRTFRENS 351
Query: 142 CNVVNAEIWTHNDRAAAVVHVTD 164
+V AEI T +A +VTD
Sbjct: 352 LTIVRAEISTREGKAKDTFYVTD 374
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/328 (76%), Positives = 279/328 (85%), Gaps = 6/328 (1%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIE 120
SDGGWFMDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+T+IE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIE 122
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ T AI DP RLSTI
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTI 182
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NV+R R AKT S +RERRLHQIMFDDRDYE V++A + +SRP
Sbjct: 183 KELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----KTSASRP 237
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VT++NIEKDYTV+TMRSKDRPKL+FD+VCTLTDMQYVVFHGMV+T EAYQEFYIRHV
Sbjct: 238 SVTLMNIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHV 297
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DGLPI+SEAE+ERVIQCLEAAIERRASE
Sbjct: 298 DGLPINSEAEQERVIQCLEAAIERRASE 325
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D TV+ + S ++ ++ V+ L D+ V+ +S++ F + DG I
Sbjct: 243 NIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 302
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + Q LE A R+S G+ +E + DR GL S++ +
Sbjct: 303 NSEAEQERVIQCLEA----AIERRASEGL-------ELELSAEDRVGLLSDITRTFRENS 351
Query: 142 CNVVNAEIWTHNDRAAAVVHVTD 164
+V AEI T +A +VTD
Sbjct: 352 LTIVRAEISTREGKAKDTFYVTD 374
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/362 (70%), Positives = 284/362 (78%), Gaps = 34/362 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ---------------------------- 92
SSDG WFMDVFNV D +G KI+DKEVIDYIQ+
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDF 120
Query: 93 -----RLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
RLE + SF S+R SVGV+PTEEHT IE TGTDRPGL SE+CAVLADL CNVV A
Sbjct: 121 TVLYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTA 180
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
EIWTHN RAAAVVHVTD S+G AI+DP RLSTI++LL NVLRG DD + AKT+LS PG+
Sbjct: 181 EIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVT 240
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLF 266
R+RRLHQIMF DRDYERVE+A R DK P VTV + E+DYTV+ MR+KDRPKLLF
Sbjct: 241 YRDRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLF 300
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
DIVCTLTDMQYVVFHG+V T RT AYQEFYIRHVDG PISSEAERER+IQCLEAAIERRA
Sbjct: 301 DIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRA 360
Query: 327 SE 328
SE
Sbjct: 361 SE 362
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + T D TV+ + + ++ +L ++ L D+ V+ + ++ F +
Sbjct: 273 PHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIR 332
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 333 HVDGFPISSEAERERLIQCLEA----AIERRASEGM-------ELELCTEDRVGLLSDIT 381
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + + AEI T N +A +VTD TG + DPK + +I+ + + +
Sbjct: 382 RIFRENSLCIKRAEISTENGKAKDTFYVTD-VTGNPV-DPKSIDSIRRQIGDTVLQV--- 436
Query: 195 RKAKTSLSP 203
K +SLSP
Sbjct: 437 -KHNSSLSP 444
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/334 (73%), Positives = 283/334 (84%), Gaps = 8/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRR+NPPRVVIDNN C DATVI+VDS+NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TI
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVLRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-----AYQE 294
VTV + EKDYT+IT R++DRPKLLFD++CTLTDM+YVVFHGMV TGR E ++QE
Sbjct: 239 HVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQE 298
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FYIRH DGLPISS+AER+RV+ CLEAAIERR SE
Sbjct: 299 FYIRHKDGLPISSKAERDRVLHCLEAAIERRESE 332
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS---DGGWFMDV- 70
P V + + T D T+I + ++ +L V+ L D+ V+ + + + W
Sbjct: 238 PHVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQ 297
Query: 71 -FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
F + DG I K D + LE A R S G+ +E DR GL
Sbjct: 298 EFYIRHKDGLPISSKAERDRVLHCLEA----AIERRESEGL-------KLELCAEDRVGL 346
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
S++ + + + AEI T +A + +VTD TG I D K + +I++
Sbjct: 347 LSDITRIFRENSLCIRRAEIATKRGKAKDIFYVTDM-TGTTI-DAKVVESIRK 397
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/357 (70%), Positives = 279/357 (78%), Gaps = 35/357 (9%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----------------------------Q 92
SDGGWFMDVF VID DG KIRD +V+DYIQ Q
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQ 122
Query: 93 RLETDAS-FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
R+E++A F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWT
Sbjct: 123 RIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWT 182
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
HN RAAAV+HVTD+ST AI DP RLSTIKELL NV+R R AKT S +RER
Sbjct: 183 HNTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSD-THRER 241
Query: 212 RLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCT 271
RLHQIMFDDRDYE V++A +SRP VT++NIEKDYTV+TMRSKDRPKL+FD+VCT
Sbjct: 242 RLHQIMFDDRDYEGVKRA----RTSASRPSVTLMNIEKDYTVVTMRSKDRPKLVFDVVCT 297
Query: 272 LTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
LTDMQYVVFHGMV+T EAYQEFYIRHVDGLPI+SEAE+ERVIQCLEAAIERRASE
Sbjct: 298 LTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQERVIQCLEAAIERRASE 354
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D TV+ + S ++ ++ V+ L D+ V+ +S++ F + DG I
Sbjct: 272 NIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 331
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + Q LE A R+S G+ +E + DR GL S++ +
Sbjct: 332 NSEAEQERVIQCLEA----AIERRASEGL-------ELELSAEDRVGLLSDITRTFRENS 380
Query: 142 CNVVNAEIWTHNDRAAAVVHVTD 164
+V AEI T +A +VTD
Sbjct: 381 LTIVRAEISTREGKAKDTFYVTD 403
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/331 (71%), Positives = 276/331 (83%), Gaps = 7/331 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN++C ATVI+VDS N+HGILLQV+QVL D+NL+I KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
K+ L NV +G FR K ++S PG MNR+RRLHQ+MF RD+ER+E V+DK+S
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEY----VQDKNS 236
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
RP VTVL+ ++DYTV+T+RS+DRPKLLFD VC LTDMQYVVFHG V TGR EAYQE YI
Sbjct: 237 RPHVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYI 296
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASE 328
RHVDGLP+ SEAER+RV +CLEAAIERRA E
Sbjct: 297 RHVDGLPLRSEAERQRVTECLEAAIERRAWE 327
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
+ V+++ + ++ G+L V +V + L IK+A I++ G D F V D G + D +
Sbjct: 327 EGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVITTKCGKAKDTFFVTDVSGNTV-DSK 385
Query: 86 VIDYIQQ-------RLETDASFAPSL 104
++ I+Q R++ + +F+P L
Sbjct: 386 TVEMIRQQIGQTILRVKGNLNFSPKL 411
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/331 (70%), Positives = 275/331 (83%), Gaps = 7/331 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN++C ATVI+VDS N+HGILLQV+QVL D+NL+I KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
K+ L NV +G FR K ++S PG MNR+RRLHQ+MF RD+ER+E A +D +S
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYA----QDTNS 236
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
RP VTVL+ ++DYTV+T+RS+DRPKLLFD VC LTDMQYVVFHG V TGR EAYQE YI
Sbjct: 237 RPHVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYI 296
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASE 328
RHVDGLP+ SEAER+RV +CLEAAIERRA E
Sbjct: 297 RHVDGLPLRSEAERQRVTECLEAAIERRAWE 327
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
+ V+++ + ++ G+L V +V + L IK+A I++ G D F V D G + D +
Sbjct: 327 EGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVITTKCGKAKDTFFVTDVSGNXV-DSK 385
Query: 86 VIDYIQQ-------RLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++ I+Q R++ + +F+P L P E S F
Sbjct: 386 TVEMIRQQIGQTILRVKGNLNFSPKL-------PXEGTRSFXF 421
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 263/329 (79%), Gaps = 6/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RR+NPPRVVIDN +C +ATVI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+ ++DYI++ L ++ F S+R SVGV+P+ +HTSIE
Sbjct: 67 SSDGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMR-SVGVIPSMDHTSIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SE+ AVL L CNVV+AE+WTHN RAAAV+ VTD TG AI DP+RLS I
Sbjct: 126 LTGSDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + FR AKT +S G+ + ERRLHQ+MF DRDYER + V D+ RP
Sbjct: 186 KELLCNVLKGSNKFRGAKTVVS-HGVTHTERRLHQMMFADRDYERADD---EVLDEKQRP 241
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V+N +KDY+V+T+RSKDRPKLLFD VCTLTDM+YVVFH ++ EAYQE+YIRH
Sbjct: 242 NVSVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIRH 301
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ S+AER RVIQCLEAAIERR SE
Sbjct: 302 IDGSPVKSDAERMRVIQCLEAAIERRVSE 330
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 241 PNVSVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIR 300
Query: 75 DCDGKKIR-DKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEV 133
DG ++ D E + IQ LE A R S G+ +E TDR GL S+V
Sbjct: 301 HIDGSPVKSDAERMRVIQC-LEA----AIERRVSEGL-------KLELCTTDRVGLLSDV 348
Query: 134 CAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T + +A +V D S GY + D K + +I++++
Sbjct: 349 TRIFRENSLTVTRAEVTTRDGKAINTFYVRDAS-GYLV-DGKTIESIRQVI 397
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 259/329 (78%), Gaps = 15/329 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN TC +A+VI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +
Sbjct: 121 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL N LR + S G+ + ERRLHQ+MF DRDYER+ D++ RP
Sbjct: 181 KQLLCN-LRLW----------SLHGVTHTERRLHQMMFADRDYERI---YNDGSDEAQRP 226
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T+RSKDRPKLLFD VCTLTDMQYVVFH V+ EAYQE+YIRH
Sbjct: 227 NVNVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRH 286
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ S+AER+RVIQCLEAAIERR SE
Sbjct: 287 IDGSPVKSDAERQRVIQCLEAAIERRVSE 315
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A + ++G + +
Sbjct: 226 PNVNVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIR 285
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S+V
Sbjct: 286 HIDGSPVKS----DAERQRVIQCLEAAIERRVSEGL-------KLELCTTDRVGLLSDVT 334
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + +V AE+ T +A HV D ++GY + D K + +I+E +
Sbjct: 335 RIFRENSLSVTRAEVTTRAGKAVNTFHVRD-ASGYPV-DAKTIDSIREAI 382
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/330 (64%), Positives = 266/330 (80%), Gaps = 4/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 VDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R +VGV+P+ + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMR-TVGVIPSTDSTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS I
Sbjct: 126 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE RV ++D+ R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVS-QGEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQR 244
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+R
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVR 304
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
H+DG P+ SEAE++RVIQCLEAAI+RR SE
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSE 334
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + +DG + V
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K L +I++ +
Sbjct: 354 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTLDSIRQTI 401
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/329 (63%), Positives = 259/329 (78%), Gaps = 6/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KL RR+NPPRVVIDN C +ATVI+VDS NKHG LL+V+QVL D+NL+I KAY+
Sbjct: 7 LDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYV 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI + L T++ F S+ S GV + +HT+IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSM-GSFGVKQSIDHTAIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVLA L CNV+NAE+WTHN RAAAV+ VTD TG AI DP++LS +
Sbjct: 126 LTGSDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRV 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + +R A+T +S G+ + ERRLHQ+MF DRDYER A V D+ RP
Sbjct: 186 KELLCNVLKGSNKYRGARTVVS-HGVTHTERRLHQMMFADRDYER---ANNDVLDEKQRP 241
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V+N EKDY+VIT+RSKDRPKLLFD VCTLTDM+YVVFH ++ EA+QE+YI+H
Sbjct: 242 NVSVVNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKH 301
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG P+ SEAER+R+IQCLEAAIERR SE
Sbjct: 302 VDGSPVKSEAERQRIIQCLEAAIERRVSE 330
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +VI + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 241 PNVSVVNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIK 300
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + I Q LE A R S G+ +E DR GL S+V
Sbjct: 301 HVDGSPVKSEAERQRIIQCLEA----AIERRVSEGL-------KLELCTKDRIGLLSDVT 349
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ + V AE+ T +A +V+D S GY + D K + +I++
Sbjct: 350 RIFRENSLTVTRAEVTTRAGKAVNTFYVSDAS-GYPV-DAKTIDSIRQ 395
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/329 (64%), Positives = 257/329 (78%), Gaps = 6/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RR+NPPRVVIDN C +ATVI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI + L ++ F S+R SVGV + +HT+IE
Sbjct: 67 SSDGGWFMDVFNVTDPDGNKVTDEAILDYITKSLGPESCFTSSMR-SVGVKQSMDHTAIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L CNVVNAE+WTHN RAAAV+ VTD TG AI DP++LS I
Sbjct: 126 LTGSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + R AKT +S G+ + ERRLHQ+MF DRDYER A D+ RP
Sbjct: 186 KELLCNVLKGSNKSRGAKTVVS-HGVTHTERRLHQMMFADRDYER---ANNDELDEKQRP 241
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V+N EKDY+V+T+ SKDRPKLLFD VCTLTDM+YVVFH ++ EA+QE+YI+H
Sbjct: 242 NVSVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKH 301
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ SEAER+R+IQCLEAAIERR SE
Sbjct: 302 IDGSPVKSEAERQRIIQCLEAAIERRVSE 330
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 241 PNVSVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIK 300
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + I Q LE A R S G+ +E TDR GL S+V
Sbjct: 301 HIDGSPVKSEAERQRIIQCLEA----AIERRVSEGL-------KLELCTTDRVGLLSDVT 349
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY + D K + +I++ +
Sbjct: 350 RIFRENSLTVTRAEVTTRAGKAVNTFYVSDAS-GYPV-DAKTIDSIRQAI 397
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/330 (64%), Positives = 264/330 (80%), Gaps = 4/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG I DP+RLS I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+R
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 308
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
H+DG P+ SEAE++RVIQCLEAAI+RR SE
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSE 338
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 308
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E +DR GL S V
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTSDRVGLLSNVT 357
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 358 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 405
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/333 (63%), Positives = 264/333 (79%), Gaps = 9/333 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ +R ++GV P+ + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMR-TIGVTPSTDSTVIE 119
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS I
Sbjct: 120 LTGCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 179
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV----GRVEDK 236
K LL NVL+G + R+AKT LS G ++ +RRLHQ+MF+DRDYE +AV ++D+
Sbjct: 180 KNLLRNVLKGSNTPREAKTVLS-HGEVHTDRRLHQMMFEDRDYE--HRAVVDDDSSIQDE 236
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
RP V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+
Sbjct: 237 RQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEY 296
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
Y+RH+DG P+ SEAE++RVIQCLEAAI RR SE
Sbjct: 297 YVRHIDGSPVKSEAEKQRVIQCLEAAINRRVSE 329
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 240 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 299
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A + R S G+ +E TDR GL S V
Sbjct: 300 HIDGSPVKSEAEKQRVIQCLEA----AINRRVSEGL-------KLELCTTDRVGLLSNVT 348
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN-VLRGYDD 193
+ + V AE+ T +A +V+D S GY+I D K + +I++ + +L+ ++
Sbjct: 349 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTIGQTILKVKNN 406
Query: 194 FRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ + PP + R L +F + +
Sbjct: 407 PEEQQQRQKPPSQDSPTRFLFGGLFKSKSF 436
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/327 (63%), Positives = 256/327 (78%), Gaps = 5/327 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKLIRRMN PRVVIDN+ C AT+++VD++N++G LLQV+QVL D+NL+I KAYISS
Sbjct: 6 DEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYISS 65
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF V DG K+ D+ +++YI++ LE D S+RSS+ ++P++EHTSIE +
Sbjct: 66 DGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIELS 125
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEV AVL DL C+VVNAEIWTHN R AA++H+T+ STG A+++PKRLS IKE
Sbjct: 126 GTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIKE 185
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
LL NVL+G FR K S+S P + RRLHQ+MF RD+ER+E A ++K P V
Sbjct: 186 LLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESA----KEKGVEPCV 241
Query: 243 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
V + +KDYTV+T+R DRPKLLFD V LTDMQYVVFHG V TG EAYQE+YIRHVD
Sbjct: 242 IVSDCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIRHVD 301
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
GLPISSEAER+RV +CLEAAIERRASE
Sbjct: 302 GLPISSEAERQRVTECLEAAIERRASE 328
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++ + D TV+ V +++ +L + L D+ V+ + + G + +
Sbjct: 239 PCVIVSDCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIR 298
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + LE S R + + + +E DR GL S++
Sbjct: 299 HVDGLPISSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDIT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ + ++ AEI T N +A VTD G ++ DP + I+E
Sbjct: 359 RIFRENGLSIQRAEISTKNGKAKDTFFVTD-VAGNSV-DPTTVRMIRE 404
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/330 (63%), Positives = 263/330 (79%), Gaps = 4/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 1 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 119
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 120 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 179
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 180 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 238
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+R
Sbjct: 239 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 298
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
H+DG P+ SEAE++RVIQCLEAAI+RR SE
Sbjct: 299 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSE 328
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 239 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 298
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 299 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 347
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 348 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 395
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/330 (63%), Positives = 263/330 (79%), Gaps = 4/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+R
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
H+DG P+ SEAE++RVIQCLEAAI+RR SE
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSE 338
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 357
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 358 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 405
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/330 (63%), Positives = 263/330 (79%), Gaps = 4/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 126 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 244
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+R
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 304
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
H+DG P+ SEAE++RVIQCLEAAI+RR SE
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSE 334
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 354 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 401
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/329 (62%), Positives = 251/329 (76%), Gaps = 5/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ ++DYI++ L ++ +R SVGV T +HT+IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMR-SVGVKQTMDHTAIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RLS I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSII 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV E + RP
Sbjct: 191 KELLCNVLGGGNKKRGAKTVVTDEAT-HTERRLHQMMFADRDYERVNDDDDFAEKQ--RP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H
Sbjct: 248 NVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ S+AER+RVIQCL AAIERR SE
Sbjct: 308 IDGSPVKSDAERQRVIQCLAAAIERRVSE 336
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD++A+ R P V + N + D +V+ + ++ +L + L D+ V+ A I
Sbjct: 238 DDDFAEKQR----PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANID 293
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG ++ D +QR+ + A R S G+ +E
Sbjct: 294 AEGPEAYQEYYIKHIDGSPVKS----DAERQRVIQCLAAAIERRVSEGL-------KLEL 342
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TDR GL S+V + + V AE+ T +A +V S G+ + D K + +I+
Sbjct: 343 CTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGAS-GFPV-DSKTIESIR 400
Query: 182 ELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ + N + +G + K+ SP R L +F R +
Sbjct: 401 QTIGNTILKVKGSPEEMKSVPQDSPT------RSLFSGLFKSRSF 439
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/329 (63%), Positives = 255/329 (77%), Gaps = 5/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KLIRRMNPPRVVIDN+ C DATVI+VDS NKHGILL+V+QVL D+NL++ KAYI
Sbjct: 7 IDDEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
S DG WFMDVFNV D DG K+ D+ V+DYI++ LE+D+ FA S+R SVGV P+ ++T IE
Sbjct: 67 SCDGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMR-SVGVKPSVDYTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G DR GL SEV AVL L CNVV+AE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 126 LIGNDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K LL NVLRG + K ++ G+ + ERRLHQ+MF DRDYE +++ V +ED+ +P
Sbjct: 186 KGLLSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDV--MEDQ-QKP 242
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N + DY+V+T+RSKDRPKLLFD VCTLTDMQYVVFH V TEAYQE+YIRH
Sbjct: 243 NVKVVNWCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRH 302
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ S+AER+RVI CLEAAI RR SE
Sbjct: 303 IDGSPVKSDAERQRVIHCLEAAIRRRVSE 331
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A + ++G + +
Sbjct: 242 PNVKVVNWCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIR 301
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S+V
Sbjct: 302 HIDGSPVKS----DAERQRVIHCLEAAIRRRVSEGL-------KLELCTTDRVGLLSDVT 350
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + V AE+ T +A +V D S GY + D K + +I+EL+ +
Sbjct: 351 RIFRENSLTVTRAEVTTKAGKAINTFYVRDPS-GYPV-DSKTIDSIRELIGQTI------ 402
Query: 195 RKAKTSLSP 203
K K S SP
Sbjct: 403 LKVKGSSSP 411
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/328 (62%), Positives = 256/328 (78%), Gaps = 8/328 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD YAKL+RR+N PRVV+DN+ C ATVI+VD+V + G LL+V+QVL D+NLV+ KAY+S
Sbjct: 2 DDAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMS 61
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFM+VF V D G KIRD+++++ I++ LETDA ++S+ ++P++EHT IE
Sbjct: 62 SDGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACM---VKSTGKMLPSKEHTLIEL 118
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TGTDRPGL SEVCAVL DL CNVVNAEIW HN RAAAV+H+ D STG AI+DP++LS IK
Sbjct: 119 TGTDRPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIK 178
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
ELL+NVL+G+ DFR S+S PG ++ RRLHQ+MF RD+ER G D S RP
Sbjct: 179 ELLYNVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFER----PGSENDNSVRPY 234
Query: 242 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VTV + ++DYTV+T S DRPKL+FD VCTLTDMQY+VFHG V T +AYQE+YIRHV
Sbjct: 235 VTVFDCPDRDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHV 294
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DG P SSEAER+RVI+C++AAIERRASE
Sbjct: 295 DGFPTSSEAERQRVIECIQAAIERRASE 322
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 254/325 (78%), Gaps = 8/325 (2%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMN PRVVI+N+ C ATVI+VD+V + G LL+V+Q L D+NLVI KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
GWFM+VF+V D G KIRD+ +++ I++ LETDA S+ ++ ++EHT +E TGT
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGK---MLLSKEHTLVELTGT 127
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVL DL CNVVNAEIW HN RAAAV+HVTD STG AI+DP++LS IKELL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELL 187
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
+NVL+G D+R S+S PG ++ RRLHQ+MF RD+ER +D S RP VTV
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSE----DDNSVRPSVTV 243
Query: 245 LNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ ++DYTV+T S DRPKLLFD VCTLTDMQY+VFHG VNT EAYQE+YIRHVDGL
Sbjct: 244 SDCPDRDYTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAYQEYYIRHVDGL 303
Query: 304 PISSEAERERVIQCLEAAIERRASE 328
P+SSEAER+RV++C++AAIERRA+E
Sbjct: 304 PVSSEAERQRVMECIQAAIERRATE 328
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 250/329 (75%), Gaps = 5/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ ++DYI++ L ++ +R SVGV T +H +IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMR-SVGVKQTTDHIAIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD +G AI DP+RLS I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSII 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV D+ RP
Sbjct: 191 KELLCNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERVNDDDDF--DEKQRP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H
Sbjct: 248 NVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ S+AER+RVIQCL AAI+RR SE
Sbjct: 308 IDGSPVKSDAERQRVIQCLAAAIQRRVSE 336
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ + ++ +L + L D+ V+ A I ++G + +
Sbjct: 247 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 306
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ + A R S G+ +E TDR GL S+V
Sbjct: 307 HIDGSPVKS----DAERQRVIQCLAAAIQRRVSEGL-------KLELCTTDRVGLLSDVT 355
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T +A +V S G+ + D K + +I++ + N + +G
Sbjct: 356 RIFRENSLTVTRAEVATKGGKAVNTFYVRGAS-GFPV-DSKTIESIRQTIGNTILKVKGS 413
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ K+ SP R L +F R +
Sbjct: 414 PEEMKSVPQDSPT------RSLFSGLFKSRSF 439
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/332 (61%), Positives = 256/332 (77%), Gaps = 9/332 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V +
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---N 251
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+Y
Sbjct: 252 PTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYY 311
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IRH+DG P++SEAER+RVIQCLEAAIERR SE
Sbjct: 312 IRHIDGSPVNSEAERQRVIQCLEAAIERRVSE 343
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 241 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 300
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 301 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 349
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 350 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 408
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 409 QEIGQTVLQVKGHPDHRKSPPQESP 433
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/332 (61%), Positives = 256/332 (77%), Gaps = 9/332 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQRL 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V +
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---N 251
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+Y
Sbjct: 252 PTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYY 311
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IRH+DG P++SEAER+RVIQCLEAAIERR SE
Sbjct: 312 IRHIDGSPVNSEAERQRVIQCLEAAIERRVSE 343
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 241 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 300
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 301 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 349
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 350 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 408
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 409 QEIGQTVLQVKGHPDHRKSPPQESP 433
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/332 (61%), Positives = 256/332 (77%), Gaps = 9/332 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 13 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 72
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 73 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 132
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 133 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 192
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V +
Sbjct: 193 ARIKERLSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---N 248
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+Y
Sbjct: 249 PTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYY 308
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IRH+DG P++SEAER+RVIQCLEAAIERR SE
Sbjct: 309 IRHIDGSPVNSEAERQRVIQCLEAAIERRVSE 340
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 238 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 297
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 298 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 346
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 347 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 405
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 406 QEIGQTVLQVKGHPDHRKSPPQESP 430
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/325 (62%), Positives = 254/325 (78%), Gaps = 8/325 (2%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMN PRVVI+N+ C ATVI++D+V + G LL+V+QVL D+NLVI KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
GWFM+VF+V D DG KIRD+ +++ I++ LETDA S+ ++ ++EHT IE TGT
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGK---MLLSKEHTLIELTGT 127
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVL DL CNVVNAE+W HN RAAAV+H+TD STG AI+DP++LS IKELL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELL 187
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
+NVL+G D+R S+S PG ++ RRLHQ+MF RD+ER V+D RP VTV
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVS----VDDIRVRPYVTV 243
Query: 245 LNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ +++YTV+T RS DRPKLLFD VCTLTDMQY+VFHG V T EAYQE+YIRH DGL
Sbjct: 244 SDCPDRNYTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAYQEYYIRHADGL 303
Query: 304 PISSEAERERVIQCLEAAIERRASE 328
P+SSEAER+RV++C++AAIERR SE
Sbjct: 304 PMSSEAERQRVMECIQAAIERRVSE 328
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 254/330 (76%), Gaps = 6/330 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVDDDDF---DEKQRP 251
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQE+YI+H
Sbjct: 252 NVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKH 311
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEV 329
+DG P+ S+AER+RVI CLEAAIERR SEV
Sbjct: 312 IDGSPVKSDAERQRVIHCLEAAIERRVSEV 341
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/329 (62%), Positives = 253/329 (76%), Gaps = 6/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDS-THTDRRLHQMMFDDRDYERVDDDDF---DEKQRP 251
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQE+YI+H
Sbjct: 252 NVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKH 311
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG P+ S+AER+RVI CLEAAIERR SE
Sbjct: 312 IDGSPVKSDAERQRVIHCLEAAIERRVSE 340
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ ++ ++ ++ + L D+ V+ A I ++G + +
Sbjct: 251 PNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIK 310
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S V
Sbjct: 311 HIDGSPVKS----DAERQRVIHCLEAAIERRVSEGL-------KLELCTTDRVGLLSNVT 359
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+ + V AE+ T +A +V S I D K + +I++ + N +
Sbjct: 360 RIFRENSLTVTRAEVTTKGGKAVNTFYVRGASG--CIVDSKTIESIRQTIGNTI 411
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 251/334 (75%), Gaps = 9/334 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSDHT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 196 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 238 SRPQ--VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ+
Sbjct: 254 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 313
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+YIRH+DG P++SEAER+R+IQCLEAAIERR SE
Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSE 347
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 251/334 (75%), Gaps = 9/334 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 17 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 76
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 77 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 136
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 137 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 196
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 197 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 254
Query: 238 SRPQ--VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ+
Sbjct: 255 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 314
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+YIRH+DG P++SEAER+R+IQCLEAAIERR SE
Sbjct: 315 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSE 348
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 251/334 (75%), Gaps = 9/334 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 196 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 238 SRPQ--VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ+
Sbjct: 254 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 313
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+YIRH+DG P++SEAER+R+IQCLEAAIERR SE
Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSE 347
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/332 (61%), Positives = 246/332 (74%), Gaps = 22/332 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP---TEEHT 117
SSDGGWFMDVFNV DG K+ D+ ++DYI++ VGV P T +HT
Sbjct: 67 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRK---------------VGVSPFGQTMDHT 111
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE GTDRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RL
Sbjct: 112 AIELMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRL 171
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
S IKELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV E +
Sbjct: 172 SIIKELLCNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERVNDDDDFAEKQ- 229
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP V V+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+Y
Sbjct: 230 -RPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYY 288
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
I+H+DG P+ S+AER+RVIQCL AAIERR SE
Sbjct: 289 IKHIDGSPVKSDAERQRVIQCLAAAIERRVSE 320
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD++A+ R P V + N + D +V+ + ++ +L + L D+ V+ A I
Sbjct: 222 DDDFAEKQR----PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANID 277
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG ++ D +QR+ + A R S G+ +E
Sbjct: 278 AEGPEAYQEYYIKHIDGSPVKS----DAERQRVIQCLAAAIERRVSEGL-------KLEL 326
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TDR GL S+V + + V AE+ T +A +V S G+ + D K + +I+
Sbjct: 327 CTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGAS-GFPV-DSKTIESIR 384
Query: 182 ELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ + N + +G + K+ SP R L +F R +
Sbjct: 385 QTIGNTILKVKGSPEEMKSVPQDSPT------RSLFSGLFKSRSF 423
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 244/324 (75%), Gaps = 9/324 (2%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYISSDGGWFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TGTDRP
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRP 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK L+NV
Sbjct: 121 GLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNV 180
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ--VTVL 245
RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P V+V+
Sbjct: 181 FRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSVV 238
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+DG P
Sbjct: 239 NWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCP 298
Query: 305 ISSEAERERVIQCLEAAIERRASE 328
++SEAER+R+IQCLEAAIERR SE
Sbjct: 299 VNSEAERKRIIQCLEAAIERRVSE 322
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/337 (60%), Positives = 249/337 (73%), Gaps = 10/337 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V+DYI++ L D S F+PS+RS++GV + ++T
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 131 IELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT +S + +R+LHQ+MF DRDY+ E V E
Sbjct: 191 KIRKLLGYVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDD-E 249
Query: 235 DKSSR--PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
DK R P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ EA
Sbjct: 250 DKCGRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEA 309
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
YQE+YIRH DG P+ SEAER+RVI+CL+AAI+RR SE
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSE 346
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +++ + ++ +L + L D+N V+ A I ++G + +
Sbjct: 257 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEAYQEYYIR 316
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +QR+ A R S G+ +E +DR GL S+V
Sbjct: 317 HTDGSPVKSEAE----RQRVIKCLKAAIQRRVSEGL-------KLELCTSDRVGLLSDVT 365
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V D S GY + D K + +I++++ + +G
Sbjct: 366 RIFRENSLTVTRAEVKTKGDKALNTFYVRDAS-GYQV-DAKTIESIRQVIGQTILQVKGG 423
Query: 192 DDFRKAKTSLSPPGIM 207
+ K SP G +
Sbjct: 424 NTDAKTSPQDSPTGFL 439
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/337 (59%), Positives = 250/337 (74%), Gaps = 10/337 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 131 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V E
Sbjct: 191 KIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-E 249
Query: 235 DKSSR--PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
DK R P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ +A
Sbjct: 250 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 309
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
YQE+YIRH DG P+ SEAER+RVI+CL+AAI+RR SE
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSE 346
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +++ + ++ +L + L D+N V+ A I ++G + +
Sbjct: 257 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQEYYIR 316
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +QR+ A R S G+ +E +DR GL S+V
Sbjct: 317 HTDGSPVKSEAE----RQRVIKCLKAAIQRRVSEGL-------KLELCTSDRVGLLSDVT 365
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V D S GY + D K + +I++++ + +G
Sbjct: 366 RIFRENSLTVTRAEVKTKGDKALNTFYVRDAS-GYQV-DTKTIESIRQVIGQTILQVKGG 423
Query: 192 DDFRKAKTSLSPPGIM 207
+ K SP G +
Sbjct: 424 NTDAKPSPQDSPTGFL 439
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/337 (59%), Positives = 250/337 (74%), Gaps = 10/337 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 1 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 120
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 121 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 180
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V E
Sbjct: 181 KIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-E 239
Query: 235 DKSSR--PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
DK R P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ +A
Sbjct: 240 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 299
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
YQE+YIRH DG P+ SEAER+RVI+CL+AAI+RR SE
Sbjct: 300 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSE 336
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +++ + ++ +L + L D+N V+ A I ++G + +
Sbjct: 247 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQEYYIR 306
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +QR+ A R S G+ +E +DR GL S+V
Sbjct: 307 HTDGSPVKSEAE----RQRVIKCLKAAIQRRVSEGL-------KLELCTSDRVGLLSDVT 355
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V D S GY + D K + +I++++ + +G
Sbjct: 356 RIFRENSLTVTRAEVKTKGDKALNTFYVRDAS-GYQV-DTKTIESIRQVIGQTILQVKGG 413
Query: 192 DDFRKAKTSLSPPGIM 207
+ K SP G +
Sbjct: 414 NTDAKPSPQDSPTGFL 429
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 248/333 (74%), Gaps = 9/333 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPP +V+DN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFN+ D +GKK++DK ++ DYI++ L D+ + P+ R SV V + H
Sbjct: 74 SDGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA+L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTERL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
IKE L +LRG + R A ++S + ERRLHQ+M DD D E++++ ++
Sbjct: 194 ERIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQR---HASNQ 250
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEF
Sbjct: 251 SQRPNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQEF 310
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
Y+RHV+G P+++EAER RV+QCLEAAIERR E
Sbjct: 311 YVRHVNGSPMNTEAERLRVVQCLEAAIERRVWE 343
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/320 (60%), Positives = 240/320 (75%), Gaps = 9/320 (2%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYISSDGGWFMDVF V +
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 76 CDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFS 131
G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TGTDRPGL S
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLLS 131
Query: 132 EVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
EV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK L+NV RG
Sbjct: 132 EVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNVFRGR 191
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ--VTVLN-IE 248
R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P V+V+N ++
Sbjct: 192 S--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSVVNWLQ 249
Query: 249 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+DG P++SE
Sbjct: 250 KYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCPVNSE 309
Query: 309 AERERVIQCLEAAIERRASE 328
AER+R+IQCLEAAIERR SE
Sbjct: 310 AERKRIIQCLEAAIERRVSE 329
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/309 (62%), Positives = 243/309 (78%), Gaps = 4/309 (1%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N+C ATVI+VDS N++GILL+V+Q+L D+NL I KAYISSDGGWFMDVFNV D DG K+
Sbjct: 2 NSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKV 61
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRPGL SE+ AVL L
Sbjct: 62 TDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLK 120
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NVL+G + R+AKT +
Sbjct: 121 CSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVV 180
Query: 202 SPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSK 259
S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N ++KDY+V+T+R K
Sbjct: 181 SH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCK 239
Query: 260 DRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319
DRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+RH+DG P+ SEAE++RVIQCLE
Sbjct: 240 DRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEKQRVIQCLE 299
Query: 320 AAIERRASE 328
AAI+RR SE
Sbjct: 300 AAIKRRVSE 308
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 219 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 278
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 279 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 327
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 328 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 375
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/333 (58%), Positives = 247/333 (74%), Gaps = 9/333 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYIT 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD T A+ D +RL
Sbjct: 135 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I+E L +LRG + R A ++S + ERRLHQ+M DD DYE++++ +
Sbjct: 195 ERIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQL---APGQ 251
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+QYVVFH ++ +AYQEF
Sbjct: 252 SQRPNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEF 311
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
Y+RHV+G P+++E ER RVIQCLEAAIERR SE
Sbjct: 312 YVRHVNGSPMNTETERLRVIQCLEAAIERRVSE 344
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 245/332 (73%), Gaps = 9/332 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYIT 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 135 IIELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+E L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S
Sbjct: 195 ERIREKLSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQS 250
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP VTV N +KDY+V+T+R KDR KLLFD VCTLTD+QYVVFH ++ +AYQEFY
Sbjct: 251 QRPNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFY 310
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+RHV+G P+++E ER RVIQCLEAAIERR SE
Sbjct: 311 VRHVNGSPMNTETERLRVIQCLEAAIERRVSE 342
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 25/215 (11%)
Query: 1 MDDEYAKLIRRMNP-----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVI 55
+DD + ++R P P V + N D +V+ + ++ +L + L D+ V+
Sbjct: 234 LDDGDYEQLQRQAPGQSQRPNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVV 293
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
A I + F V +G + + + Q LE A R S GV
Sbjct: 294 FHANIDAKDNQAYQEFYVRHVNGSPMNTETERLRVIQCLEA----AIERRVSEGV----- 344
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+E D+ GL SEV + + V AE+ T A +V S G A+ D K
Sbjct: 345 --KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVTTRGRMAVNTFYVRG-SAGEAV-DQK 400
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
+ +I+E + + L + K PP +E
Sbjct: 401 AIDSIREAIGHSL-------QVKGQAEPPEPQKKE 428
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 245/324 (75%), Gaps = 15/324 (4%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MNPPRV IDN +C +ATVI VDS NK+G+LL+V+QVL D+ L++KKAYISSDGGWFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
NV + G KI D+ V+ D I + + D+ PS R ++GV P+ ++T IE TGTDRP
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTGTDRP 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL +L CNVVNAE+WTHN+RAAAV+ VTD +G AI D +RL IKE L NV
Sbjct: 121 GLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERLCNV 180
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK--AVGRVEDKSSRPQVTVL 245
+G R AKT+++ GI + ERRLHQ+M +DRDY+R +K A G S V+V+
Sbjct: 181 FKGRS--RDAKTTVAM-GITHTERRLHQMMLEDRDYDRHDKDRASG-----SPTSMVSVV 232
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T +AYQ++YIRH+DG P
Sbjct: 233 NWLQKDYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSP 292
Query: 305 ISSEAERERVIQCLEAAIERRASE 328
++SEAER+R+I CLEAAIERR SE
Sbjct: 293 VNSEAERKRIIHCLEAAIERRVSE 316
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/329 (60%), Positives = 238/329 (72%), Gaps = 6/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + AT+IKVDS N+ G LL+V+QVLND++L+I++AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G N +RRLHQ+M+ DRDY + G D+ S+P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTNTQRRLHQMMYADRDY---DMDSGSTNDR-SKP 244
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N +K YTV+ +R DRPKLLFD VCTLTDMQYVVFH V EAYQE+YIRH
Sbjct: 245 LVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRH 304
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG PISSEAE++RVI CLEAAI RR SE
Sbjct: 305 VDGCPISSEAEQQRVILCLEAAIRRRTSE 333
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A + ++G + +
Sbjct: 244 PLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIR 303
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + QQR+ A R+S G+ +E DR GL S+V
Sbjct: 304 HVDGCPISSEAE----QQRVILCLEAAIRRRTSEGI-------RLELCSEDRVGLLSDVT 352
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A +VTD S+G +K + KE+ +LR DD
Sbjct: 353 RIFRENGLSVTRAEVTTRGSQAVNAFYVTD-SSGNPVKSETIEAVRKEIGLTILRVKDD- 410
Query: 195 RKAKTSLSPP 204
S SPP
Sbjct: 411 ---AYSKSPP 417
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/329 (60%), Positives = 238/329 (72%), Gaps = 6/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + AT+IKVDS N+ G LL+V+QVLND++L+I++AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G N +RRLHQ+M+ DRDY + G D+ S+P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTNTQRRLHQMMYADRDY---DMDSGSTNDR-SKP 244
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N +K YTV+ +R DRPKLLFD VCTLTDMQYVVFH V EAYQE+YIRH
Sbjct: 245 LVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRH 304
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG PISSEAE++RVI CLEAAI RR SE
Sbjct: 305 VDGCPISSEAEQQRVILCLEAAIRRRTSE 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A + ++G + +
Sbjct: 244 PLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIR 303
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + QQR+ A R+S G+ +E DR GL S+V
Sbjct: 304 HVDGCPISSEAE----QQRVILCLEAAIRRRTSEGI-------RLELCSEDRVGLLSDVT 352
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A +VTD S+G +K + KE+ +LR DD
Sbjct: 353 RIFRENGLSVTRAEVTTRGSQAVNAFYVTD-SSGNPVKSETIEAVRKEIGLTILRVKDD- 410
Query: 195 RKAKTSLSPP 204
S SPP
Sbjct: 411 ---AYSKSPP 417
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 244/324 (75%), Gaps = 8/324 (2%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MN PRVVIDN C +AT++KVDS NKHGILL+ +QVL D+ L I KA +SSDG WFMDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-MPTEEHTSIEFTGTDRPGLF 130
V D +GKK+ D+ VI YI++ LET+ PS SVGV + ++HT+IE TGTDRPGL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
SE+ AVL+DL CNVV AE+WTHN R A +V+VTD TG I D +++ I+ELL NV+RG
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV-----EDKSSRPQVTVL 245
+ R AKT ++ G+ + ERRLHQ+MF DRDYE+++ VGR ++ +++P VTV
Sbjct: 181 NSNIRGAKT-VASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPHVTVE 239
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
N +E+ Y+V+ ++ KDRPKLLFD+VCTLTDM+YVVFH +++ + +QE+YIRH DG P
Sbjct: 240 NCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIRHTDGCP 299
Query: 305 ISSEAERERVIQCLEAAIERRASE 328
++SEAER+RVIQCLEAAI RRASE
Sbjct: 300 VNSEAERQRVIQCLEAAIRRRASE 323
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N +V+ V ++ +L V+ L D+ V+ A I S G + +
Sbjct: 234 PHVTVENCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIR 293
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + Q LE A R+S GV +E DR GL S+V
Sbjct: 294 HTDGCPVNSEAERQRVIQCLEA----AIRRRASEGV-------RLELCTNDRVGLLSDVT 342
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI-KELLFNVLRGYDD 193
+ + +V AE+ T D+A V +VTD + G + DPK + + +E+ +L+ D+
Sbjct: 343 RIFRENGMSVTRAEVSTRGDKAVNVFYVTD-AAGNPV-DPKTVEAVRREIGLTILQVKDN 400
Query: 194 FRKAKTSLSPPGI 206
K+ P I
Sbjct: 401 CMDTKSPRREPAI 413
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 244/333 (73%), Gaps = 9/333 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+ IDN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGW MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I++ L +LRG + R A ++S + ERRLHQ+M DD D+E++ + ++
Sbjct: 194 ERIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQ 250
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEF
Sbjct: 251 SQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEF 310
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
Y+RHV+G P+ +EA+R RVIQCLEAAIERR SE
Sbjct: 311 YVRHVNGSPMHTEADRLRVIQCLEAAIERRVSE 343
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/330 (57%), Positives = 241/330 (73%), Gaps = 15/330 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+R MNPPRVVIDN+ DATVI+VDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVFNV D DG K+ D I YIQ+ LE + + P +R++VG++P+E++TSIE T
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD--HSTGYAIKDPKRLSTI 180
GTDRPGL SEVCAVLA + C V +AE+WTHN R AAVV VTD + G AI+D R++ I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
L N+LRG + R A + + ++ERRLHQ+MF+DRDY G R
Sbjct: 188 SRRLDNLLRGQNGVRAAAAA----SLTHKERRLHQMMFEDRDY-------GAAGPPDPRT 236
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIR 298
+V+V + E+ YTV+ +R +DRPKLLFD VCT+TDMQYVV HG V++ AYQE+YIR
Sbjct: 237 EVSVTHCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGGAYQEYYIR 296
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
HVDG P+S+EAER RV+QCLEAA+ERR ++
Sbjct: 297 HVDGHPVSTEAERRRVVQCLEAAVERRTAD 326
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 243/333 (72%), Gaps = 9/333 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+ IDN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGW MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I++ L +LRG + R ++S + ERRLHQ+M DD D+E++ + ++
Sbjct: 194 ERIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQ 250
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEF
Sbjct: 251 SQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEF 310
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
Y+RHV+G P+ +EA+R RVIQCLEAAIERR SE
Sbjct: 311 YVRHVNGSPMHTEADRLRVIQCLEAAIERRVSE 343
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 243/329 (73%), Gaps = 3/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN++ AT+IKVDS NK G LL+V+QVLND+NL+I++AYI
Sbjct: 10 LDDEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L SLR SVGV EEHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQAAEEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG+ I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLGKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G ++ERRLHQ+M+ DRDY++ + G ++ +P
Sbjct: 190 KQLLLFVLKGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYDQDDLDCGSTSER-RKP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + +K YTV+ +RS DRPKLLFD VCTLTDMQYVV+H V EA QE+YIRH
Sbjct: 248 LVTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYYIRH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG PISSEAER+RVI CLEAAI RR SE
Sbjct: 308 MDGSPISSEAERQRVIHCLEAAIRRRTSE 336
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 15 PRVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
P V ++ +CAD TV+ + S ++ +L + L D+ V+ A + ++G +
Sbjct: 247 PLVTVE--SCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYY 304
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + + LE A R+S G+ +E DR GL S+
Sbjct: 305 IRHMDGSPISSEAERQRVIHCLEA----AIRRRTSEGI-------RLELCSDDRAGLLSD 353
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V + + +V AE+ T +A V +VTD S G +K + KE+ VL D
Sbjct: 354 VTRIFRENGLSVTRAEVTTRGTQAVNVFYVTDAS-GNPVKSEMIEAVRKEIGLTVLCVKD 412
Query: 193 D 193
D
Sbjct: 413 D 413
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/329 (58%), Positives = 238/329 (72%), Gaps = 3/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE+ KL+ RMNPPRV +DN T AT+IKVDS NK G LL+V+QVL D++L+I++AYI
Sbjct: 10 MDDEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQTASENTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLTKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G ++ERRLHQ+M+ DRDY+ ++ G + +P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYD-IDDGEGGSTSERRKP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N +K YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE+YIRH
Sbjct: 248 LVTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYYIRH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG PISSEAER+RVI CLEAAI RR E
Sbjct: 308 MDGSPISSEAERQRVINCLEAAIRRRNPE 336
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 15 PRVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
P V ++N CAD TV+ + ++ +L + L D+ V+ A I ++G +
Sbjct: 247 PLVTVEN--CADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYY 304
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + +QR+ A R+ G+ +E DR GL SE
Sbjct: 305 IRHMDGSPISSEAE----RQRVINCLEAAIRRRNPEGI-------RLELCSEDRIGLLSE 353
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V + + +V AE+ T + +A +VTD S GY +K + KE+ +LR D
Sbjct: 354 VTRIFRENGLSVTRAEVTTRDSQAVNAFYVTDAS-GYPVKSETIEAVRKEIGLTILRVKD 412
Query: 193 DFRKAKTSLSPPGIMNRER 211
D S SPP R R
Sbjct: 413 D------SNSPPPQEERGR 425
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/327 (59%), Positives = 236/327 (72%), Gaps = 4/327 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV IDN + AT+IKVDS N+HG LL+V+QVL D+NL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +
Sbjct: 71 DGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
LL VL+G D A T++S ++ERRLHQ+M+ DRD++ + E SRP V
Sbjct: 191 LLLYVLKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFDLNYTSCS--ESYQSRPLV 247
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +EK YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE++IRHVD
Sbjct: 248 TVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSEAER+RVI CLEAAI RR +E
Sbjct: 308 GSPISSEAERQRVIHCLEAAIRRRTTE 334
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A I ++ + +
Sbjct: 245 PLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + LE A R++ G+ +E DR GL ++V
Sbjct: 305 HVDGSPISSEAERQRVIHCLEA----AIRRRTTEGI-------KLELCSEDRVGLLTDVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A V +VTD ++G +++ + + + +L DD
Sbjct: 354 RIFRENGLSVTRAEVTTRGTQAVNVFYVTD-ASGNSVRSETIKAVREAIGLTILHVKDDE 412
Query: 195 RKAKTSLSPP 204
+++K PP
Sbjct: 413 QQSKC---PP 419
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/327 (58%), Positives = 235/327 (71%), Gaps = 4/327 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV IDN + AT+IKVDS N+HG LL+V+QVL D+NL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDV +V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +
Sbjct: 71 DGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
LL VL+G D A T++S ++ERRLHQ+M+ DRD++ + E SRP V
Sbjct: 191 LLLYVLKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFDLNYTSCS--ESYQSRPLV 247
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +EK YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE++IRHVD
Sbjct: 248 TVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSEAER+RVI CLEAAI RR +E
Sbjct: 308 GSPISSEAERQRVIHCLEAAIRRRTTE 334
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A I ++ + +
Sbjct: 245 PLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + LE A R++ G+ +E DR GL ++V
Sbjct: 305 HVDGSPISSEAERQRVIHCLEA----AIRRRTTEGI-------KLELCSEDRVGLLTDVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A V +VTD ++G +++ + + + +L DD
Sbjct: 354 RIFRENGLSVTRAEVTTRGTQAVNVFYVTD-ASGNSVRSETIKAVREAIGLTILHVKDDE 412
Query: 195 RKAKTSLSPP 204
+++K PP
Sbjct: 413 QQSKC---PP 419
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/329 (58%), Positives = 240/329 (72%), Gaps = 2/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + T+IKVDS NK G LL+V+QVL D+NL++++AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLAKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K LL VLRG D + A T++S +++RRLHQ+M+ DRDY+ + + ++
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKL 248
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + I+K YTV+ +R DRPKLLFD VCT+TDMQYVV+HG VN EAYQE+YIRH
Sbjct: 249 NVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRH 308
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG PISSEAER+RVI CLEAA+ RR SE
Sbjct: 309 VDGYPISSEAERQRVIHCLEAAVRRRTSE 337
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 12/192 (6%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D +Y+ N V +D+ TV+ + ++ +L + + D+ V+ ++
Sbjct: 235 DGDYSCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVN 294
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG I + + LE A R+S GV +E
Sbjct: 295 AEGPEAYQEYYIRHVDGYPISSEAERQRVIHCLEA----AVRRRTSEGV-------KLEL 343
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+G DR GL S+V + + +V AE+ T +A V +VTD S G +K + K
Sbjct: 344 SGEDRVGLLSDVTRIFRENGLSVCRAEVTTRGSQAMNVFYVTDVS-GNPVKSETIEAVRK 402
Query: 182 ELLFNVLRGYDD 193
E+ +LR DD
Sbjct: 403 EIGLTILRVKDD 414
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/329 (58%), Positives = 240/329 (72%), Gaps = 2/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + T+IKVDS NK G LL+V+QVL D+NL++++AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLTKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K LL VLRG D + A T++S +++RRLHQ+M+ DRDY+ + + ++
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKL 248
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + I+K YTV+ +R DRPKLLFD VCT+TDMQYVV+HG VN EAYQE+YIRH
Sbjct: 249 NVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRH 308
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG PISSEAER+RVI CLEAA+ RR SE
Sbjct: 309 VDGYPISSEAERQRVIHCLEAAVRRRTSE 337
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D +Y+ N V +D+ TV+ + ++ +L + + D+ V+ ++
Sbjct: 235 DGDYSCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVN 294
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG I + +QR+ A R+S GV +E
Sbjct: 295 AEGPEAYQEYYIRHVDGYPISSEAE----RQRVIHCLEAAVRRRTSEGV-------KLEL 343
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+G DR GL S+V + + +V AE+ T +A V +VTD
Sbjct: 344 SGEDRVGLLSDVTRIFRENGLSVCRAEVTTRGSQAMNVFYVTD 386
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/302 (61%), Positives = 236/302 (78%), Gaps = 6/302 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D++L I KAYI
Sbjct: 12 MDDEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ V+DYIQ+ L +A F+ SLR SVGV+P+ + T IE
Sbjct: 72 SSDGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLR-SVGVIPSTDSTVIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD TG A+ DP+RLS I
Sbjct: 131 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLI 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
K LL NVL+G + ++AKT +S G ++ +RRLHQ+MF+DRDYE V+ V+D+
Sbjct: 191 KSLLRNVLKGSNTPKEAKTVVS-QGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDER 249
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+
Sbjct: 250 QRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYG 309
Query: 297 IR 298
++
Sbjct: 310 LK 311
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 245/336 (72%), Gaps = 10/336 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV-GVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE++ P S G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G V
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERGGVAAA 252
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GRTEAY 292
++ +V V++ E+ YTV+ +R +DRP+LLFD +C LTD+ YVVFHG V+ EAY
Sbjct: 253 KAKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAY 312
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
QE+Y+RHVDG P+ +AER R+++CLEAA+ERRAS+
Sbjct: 313 QEYYVRHVDGHPVRCDAERLRLVRCLEAAVERRASD 348
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 242/334 (72%), Gaps = 9/334 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+R MNPPRVV+DN C +ATVI+VDSV+ HG LL V+QV+ D+ LVI+KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-----GRVED 235
L N+LRG R A + +P G+ ++ERRLHQ+MFDDRDY+ A GR
Sbjct: 195 STRLGNLLRGQSGVRAAAAA-APGGLTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPT 253
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQE 294
++ VT E+ YT + +R +DRPKLLFD VCT+TDM YV+ HG V++ R AYQE
Sbjct: 254 PATEVSVTPC-AERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQE 312
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+YIRHVDG P+ SEAER+RV+QCLEAAIERR ++
Sbjct: 313 YYIRHVDGDPVRSEAERQRVVQCLEAAIERRTAD 346
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 246/336 (73%), Gaps = 10/336 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G V
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERGGVAAA 252
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GRTEAY 292
++ +V V++ E+ YTV+ +R +DRP+LLFD +C LTD+ YVVFHG V+ EAY
Sbjct: 253 KAKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAY 312
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
QE+Y+RHVDG P+ +AER R+++CLEAA+ERRAS+
Sbjct: 313 QEYYVRHVDGHPVRCDAERLRLVRCLEAAVERRASD 348
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 232/327 (70%), Gaps = 5/327 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+RRMNPPRVVIDN DATVIKVDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE T
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L N+LR + D R + S +++ERRLHQ+MFDDR E A D S R +V
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE--GHAAAAPPDGSLRTEV 247
Query: 243 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVD 301
+V + E+ YT + +R +DRPKLLFD VCT+TDM+YVV HG V+ AYQE+YIRHVD
Sbjct: 248 SVTHAERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQEYYIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G I E E++R+++CL AAIERR ++
Sbjct: 308 GHAIRCEDEQQRLVRCLAAAIERRTAD 334
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 232/327 (70%), Gaps = 5/327 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+RRMNPPRVVIDN DATVIKVDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE T
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L N+LR + D R + S +++ERRLHQ+MFDDR E A D S R +V
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE--GHAATAPPDGSLRTEV 247
Query: 243 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVD 301
+V + E+ YT + +R +DRPKLLFD VCT+TDM+YVV HG V+ AYQE+YIRHVD
Sbjct: 248 SVTHAERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAYQEYYIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G I E E++R+++CL AAIERR ++
Sbjct: 308 GHAIRCEDEQQRLVRCLAAAIERRTAD 334
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 241/329 (73%), Gaps = 3/329 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ DE+ KL+ RMNPPRV +DN + TVIKVDS NK G LL+V+QVL D+NL +++AYI
Sbjct: 10 LHDEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D +GKK +V D IQQ L AS SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D + A T++S G +++RRLHQ+M+ DRDY+ + G D+ ++
Sbjct: 190 KQLLLYVLKGDIDKKSANTAVS-VGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDR-NKL 247
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + I+K YTV+ +R DRPKLLFD VCTLTDMQYVV+HG V EAYQE+YIRH
Sbjct: 248 LVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
VDG PISSEAER+RVI CLEAA+ RR SE
Sbjct: 308 VDGSPISSEAERQRVIHCLEAAVRRRTSE 336
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 16/188 (8%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V +D+ TV+ + ++ +L + L D+ V+ + ++G + +
Sbjct: 249 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 308
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + + LE A R+S G+ +E G DR GL S+V +
Sbjct: 309 DGSPISSEAERQRVIHCLEA----AVRRRTSEGI-------KLELCGEDRVGLLSDVTRI 357
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
+ +V AE+ T +A V +VTD S G +K + KE+ +L DD
Sbjct: 358 FRENGLSVNRAEVTTRGSQAMNVFYVTDVS-GNPVKSETIETVRKEIGLTILHVKDDV-- 414
Query: 197 AKTSLSPP 204
S PP
Sbjct: 415 --CSKPPP 420
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 237/335 (70%), Gaps = 8/335 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R+N P VVIDN++C DAT++KVDS NKHGILL+V+QVL D++L I KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + H
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE +G DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVGRVE 234
L+ +KE L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+ ++ V
Sbjct: 189 LARMKEQLSQVLRGDDENRLATTDFS-SGLTHTERRLHQMMLADRDYDVPSSTSSINAVL 247
Query: 235 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D RP +++ N +EK Y+V++++ KDRPKLLFD VCTLTDM+YVVFH AYQ
Sbjct: 248 DARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQ 307
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E+YIRH+DG + +AE+ERV++CLEAAIERR SE
Sbjct: 308 EYYIRHMDGCTLDLDAEQERVVKCLEAAIERRVSE 342
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 16 RVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
R VI C + +V+ V ++ +L + L D+ V+ A +DG + + +
Sbjct: 252 RPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYI 311
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEV 133
DG + +D Q+R+ A R S G+ +E DR GL S+V
Sbjct: 312 RHMDGCTLD----LDAEQERVVKCLEAAIERRVSEGL-------RLELCTRDRVGLLSDV 360
Query: 134 CAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + +V A++ T DRA V +VTD S
Sbjct: 361 TRVFREKGLSVTRADVSTRGDRAVNVFYVTDTS 393
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 237/335 (70%), Gaps = 8/335 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R+N P VVIDN++C DAT++KVDS NKHGILL+V+QVL D++L I KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + H
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE +G DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVGRVE 234
L+ +KE L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+ ++ V
Sbjct: 189 LARMKERLSQVLRGDDENRLATTDFS-SGLTHTERRLHQMMLADRDYDVPSSTSSINAVL 247
Query: 235 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D RP +++ N +EK Y+V++++ KDRPKLLFD VCTLTDM+YVVFH AYQ
Sbjct: 248 DARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQ 307
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E+YIRH+DG + +AE+ERV++CLEAAIERR SE
Sbjct: 308 EYYIRHMDGCTLDLDAEQERVVKCLEAAIERRVSE 342
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 16 RVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
R VI C + +V+ V ++ +L + L D+ V+ A +DG + + +
Sbjct: 252 RPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYI 311
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEV 133
DG + +D Q+R+ A R S G+ +E DR GL S+V
Sbjct: 312 RHMDGCTLD----LDAEQERVVKCLEAAIERRVSEGL-------RLELCTRDRVGLLSDV 360
Query: 134 CAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + +V A++ T DRA V +VTD S
Sbjct: 361 TRVFREKGLSVTRADVSTRGDRAVNVFYVTDTS 393
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 237/332 (71%), Gaps = 17/332 (5%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFM VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGY--ALPEDQFTSIELTGA 133
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS----SRP 240
+V+RG + T +S ERRLH +M D E+A G ++ +RP
Sbjct: 194 RDVMRGDGTCNRGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEF 295
+V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+
Sbjct: 248 KVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEY 307
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
YIRHVDG P+ S+AER R+++CLEAA+ERRAS
Sbjct: 308 YIRHVDGHPVRSDAERARLVRCLEAAVERRAS 339
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 240/330 (72%), Gaps = 13/330 (3%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
++ +LI R R+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+SD
Sbjct: 12 QFWRLIGR----RIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITSD 67
Query: 64 GGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI 119
GGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H I
Sbjct: 68 GGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNII 127
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TGTDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 128 ELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLER 187
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
I+E L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S R
Sbjct: 188 IREKLSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQSQR 243
Query: 240 PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VTV N +KDY+V+T+R KDR KLLFD VCTLTD+QYVVFH ++ +AYQEFY+R
Sbjct: 244 PNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 303
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
HV+G P+++E ER RVIQCLEAAIERR SE
Sbjct: 304 HVNGSPMNTETERLRVIQCLEAAIERRVSE 333
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 25/215 (11%)
Query: 1 MDDEYAKLIRRMNP-----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVI 55
+DD + ++R P P V + N D +V+ + ++ +L + L D+ V+
Sbjct: 225 LDDGDYEQLQRQAPGQSQRPNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVV 284
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
A I + F V +G + + + Q LE A R S GV
Sbjct: 285 FHANIDAKDNQAYQEFYVRHVNGSPMNTETERLRVIQCLEA----AIERRVSEGV----- 335
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+E D+ GL SEV + + V AE+ T A +V S G A+ D K
Sbjct: 336 --KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVTTRGRMAVNTFYVRG-SAGEAV-DQK 391
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
+ +I+E + + L + K PP +E
Sbjct: 392 AIDSIREAIGHSL-------QVKGQAEPPEPQKKE 419
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/334 (54%), Positives = 237/334 (70%), Gaps = 10/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D ++ L +R++PP V IDN+TC D +++KV+S N+HGILL+V+QVL D++L+I KAYI
Sbjct: 9 FDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLDLIISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS-----LRSSVGVMPTEE 115
SSDG WFMDVF+V D G K+ D+ +IDYIQQ L + + L +VGV E
Sbjct: 69 SSDGRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRTVGVQSIGE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE TGTDRPGL SE+ AVL +L CNVV AE+WTHN R A VV+VTD ST I++P+
Sbjct: 129 HTAIELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPE 188
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L+ IKE L NVL+G DD R KT S G+ + ERRLHQ+MF DRDYE + R
Sbjct: 189 QLAAIKEQLSNVLKGNDDRRGVKTDFS-MGLTHTERRLHQMMFADRDYEGPDT---RSLG 244
Query: 236 KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
++ RP + + N EK Y+V+T+ KDRPKLLFD VCTLTDMQYVV H + + T A QE
Sbjct: 245 ENGRPIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQE 304
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+YIRH+DG + +E E++RVI+CLEAAIERR SE
Sbjct: 305 YYIRHMDGCTLDTEGEKQRVIKCLEAAIERRVSE 338
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P + I+N +V+ V ++ +L + L D+ V+ A I+S G + + + +
Sbjct: 249 PIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQEYYIR 308
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R VI ++ +E S E +E +DR
Sbjct: 309 HMDGCTLDTEGEKQR---VIKCLEAAIERRVS---------------EGVRLELCTSDRV 350
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
GL S++ + + +V A++ T D+A V +VTD S
Sbjct: 351 GLLSDITRIFRENGLSVTRADVTTRADKAVNVFYVTDTS 389
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 231/332 (69%), Gaps = 17/332 (5%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFM VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGY--ALPEDQFTSIELTGA 133
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD----RDYERVEKAVGRVEDKSSRP 240
+V+RG T +S ERRLH +M D E +RP
Sbjct: 194 RDVMRGDGTCNHGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGGDESGGCGVARP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEF 295
+V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+
Sbjct: 248 KVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEY 307
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
YIRHVDG P+ S+AER R+++CLEAA+ERRAS
Sbjct: 308 YIRHVDGHPVRSDAERARLVRCLEAAVERRAS 339
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/332 (55%), Positives = 235/332 (70%), Gaps = 11/332 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN+ C +ATVI+VD V KHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFMDVFNV D DG K++++EVID+IQ+ LE+D P V P ++ TSIE TG
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGF-VPPEDQFTSIELTGA 134
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ RAAAV+ +TD +TG AI D RLS +ELL
Sbjct: 135 DRPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELL 194
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR------DYERVEKAVGRVEDKSS 238
N+++ + T +S G ERRLH++M DDR E+ G + +
Sbjct: 195 SNLMQSDGRCNRGATGVS-VGTARTERRLHKMMLDDRVGGGEEAVGGGEERGGCGKARHK 253
Query: 239 RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEF 295
+V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ EAYQE+
Sbjct: 254 AAKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASKEAYQEY 313
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
YIRHVDG P+ ++AER R+++CLEAA+ERRAS
Sbjct: 314 YIRHVDGHPVRADAERTRLVRCLEAAVERRAS 345
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 235/327 (71%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVV+DN CA T++KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 11 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E T
Sbjct: 71 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELT 122
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+
Sbjct: 123 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 182
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER + S P V
Sbjct: 183 RLRNVLKGDNDIRSAKTSVS-LAVTHTERRLHQMMFADRDYEREPI----IRSASESPAV 237
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDMQYVVFH +NT +AY EFYIRH D
Sbjct: 238 TVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTD 297
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSEAER+RVIQCL+AAIERRASE
Sbjct: 298 GSPISSEAERQRVIQCLQAAIERRASE 324
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 2 DDEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D E +IR + P V + N +V+ V ++ +L V+ L D+ V+ A I
Sbjct: 221 DYEREPIIRSASESPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATI 280
Query: 61 SSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH 116
++ G F + DG I + VI +Q +E AS E
Sbjct: 281 NTAGDKAYLEFYIRHTDGSPISSEAERQRVIQCLQAAIERRAS---------------EG 325
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
+E DR GL ++V + NV AEI T ++ A V +VTD A DPK
Sbjct: 326 VRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTSEIALNVFYVTDAMGNPA--DPKI 383
Query: 177 LSTIKE 182
+ +++
Sbjct: 384 IEAVRQ 389
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 235/327 (71%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVV+DN CA T++KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 7 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 66
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E T
Sbjct: 67 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELT 118
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+
Sbjct: 119 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 178
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER + S P V
Sbjct: 179 RLRNVLKGDNDIRSAKTSVS-LAVTHTERRLHQMMFADRDYEREPI----IRSASESPAV 233
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDMQYVVFH +NT +AY EFYIRH D
Sbjct: 234 TVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTD 293
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSEAER+RVIQCL+AAIERRASE
Sbjct: 294 GSPISSEAERQRVIQCLQAAIERRASE 320
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 2 DDEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D E +IR + P V + N +V+ V ++ +L V+ L D+ V+ A I
Sbjct: 217 DYEREPIIRSASESPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATI 276
Query: 61 SSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH 116
++ G F + DG I + VI +Q +E AS E
Sbjct: 277 NTAGDKAYLEFYIRHTDGSPISSEAERQRVIQCLQAAIERRAS---------------EG 321
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
+E DR GL ++V + NV AEI T ++ A V +VTD A DPK
Sbjct: 322 VRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTSEIALNVFYVTDAMGNPA--DPKI 379
Query: 177 LSTIKE 182
+ +++
Sbjct: 380 IEAVRQ 385
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 231/335 (68%), Gaps = 7/335 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L RR+NPP V IDN+TC D T+IKVDS NKHGILL+V+Q+L D++L I KAYI
Sbjct: 9 FDPEYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPTEE 115
SSDGGWFMDVF+V D G K+ D+ +I+YIQQ R+ + L VGV E
Sbjct: 69 SSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVGVQSIGE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T+IE TGTDRPGL SE+ AVL CNVV AE WTHN R A VV+VTD S+ I+D
Sbjct: 129 YTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNRPIEDEV 188
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVE 234
RLSTIK L NVL+G DD K + G+ +RERRLHQ+MF DRDYE + + +
Sbjct: 189 RLSTIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSSDSSNPSLL 248
Query: 235 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D++ +P +TV N EK Y+V+ ++ +DRPKLLFD VCTLTDMQYVVFH + A Q
Sbjct: 249 DENMKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASITCNLPYALQ 308
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E+YIRH+DG + +E E+ RVI+CLEAAI RRASE
Sbjct: 309 EYYIRHMDGCTLDTEGEKHRVIKCLEAAIGRRASE 343
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D L+ P + ++N +V+ + ++ +L + L D+ V+ A I+
Sbjct: 241 DSSNPSLLDENMKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASIT 300
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
+ + + + + DG + + + + LE A R+S G+ S+E
Sbjct: 301 CNLPYALQEYYIRHMDGCTLDTEGEKHRVIKCLEA----AIGRRASEGL-------SLEL 349
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ +DR GL S+V + + +V A++ T D+A V +V D S+G
Sbjct: 350 SASDRIGLLSDVTRMFRENGLSVTRADVTTRGDKAINVFYVRDASSG 396
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 236/326 (72%), Gaps = 14/326 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY+KLI RMN PRVVIDN C AT++KVDS +HGILL+ +QVL D+NL I+KAYISS
Sbjct: 15 DEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLNLSIQKAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI Y++Q L T P+ + + T++E T
Sbjct: 75 DGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPA--------TSNDLTALELT 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+L C+VV A++WTHN R A++++V D ++G IK+ +R+ TI
Sbjct: 127 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTIVG 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G DD AKTS+S + + ERRLHQ+MF DRDYER K V + + S P V
Sbjct: 187 RLRNVLKGDDDILYAKTSVSMT-VTHTERRLHQMMFADRDYER--KPVQQHTEDS--PVV 241
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD++CT+TDM YVVFHG + T R AY EFYIRH D
Sbjct: 242 TVQNLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFYIRHTD 301
Query: 302 GLPISSEAERERVIQCLEAAIERRAS 327
G PISSEAER+RVIQCL+A+IERR S
Sbjct: 302 GTPISSEAERQRVIQCLQASIERRTS 327
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ + ++ +L VI + D++ V+ I++ F
Sbjct: 237 DSPVVTVQNLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFY 296
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E R+S GV +E TDRP
Sbjct: 297 IRHTDGTPISSEAERQRVIQCLQASIER--------RTSRGV-------RLELCTTDRPC 341
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L ++V + NV AE+ T + A + +VTD A D K + +++E
Sbjct: 342 LLADVTRTFRENGLNVTRAEVSTSQEVALNLFYVTDGHGSAA--DTKMIDSVRE 393
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 6/298 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVDDDDF---DEKQRP 251
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
V V+N +KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQ + I
Sbjct: 252 NVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQVYII 309
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 356 bits (913), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 184/328 (56%), Positives = 236/328 (71%), Gaps = 4/328 (1%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDE+ KL+ RMNPPRV +DN + AT+IKVDS NK G LL+V+QVL D+NL+I++AYIS
Sbjct: 10 DDEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYIS 69
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVF V D G K+ + +V + IQQ L SLR SVGV E+T+IE
Sbjct: 70 SDGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQAAAENTTIEL 129
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TG DRPGL SE+ A+L DL CNVV +E+WTHN R A+VV++TD +TG I DP RL+ IK
Sbjct: 130 TGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLTKIK 189
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
+LL VL+G D R A T++S ++ERRLHQ+M+ DRDY+ + G ++ +P
Sbjct: 190 QLLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMDDADFGSASER--KPF 246
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VT+ N ++K YT++ +R DRPKLLFD VCTLTDMQYVV+HG + EA QE++IRH+
Sbjct: 247 VTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIRHM 306
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DG P+SSEAER+RVI CLEAAI RR SE
Sbjct: 307 DGSPVSSEAERQRVINCLEAAIRRRTSE 334
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N T++ + ++ +L + L D+ V+ I ++G + +
Sbjct: 245 PFVTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + +QR+ A R+S GV +E DR GL S+V
Sbjct: 305 HMDGSPVSSEAE----RQRVINCLEAAIRRRTSEGV-------RLELCSEDRVGLLSDVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A V +VTD S+GY +K+ + KE+ +L DD
Sbjct: 354 RIFRENGLSVTRAEVTTRGSQAVNVFYVTD-SSGYPVKNETIEAVRKEIGLTILHVNDDA 412
Query: 195 RKAKTSLSPP 204
S SPP
Sbjct: 413 H----SKSPP 418
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 234/332 (70%), Gaps = 24/332 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN C ATV+KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH-----T 117
DG WFMDVF+V D +G K+ D+ VI+YI+Q L T + H T
Sbjct: 68 DGRWFMDVFHVTDINGNKLTDESVINYIEQSLGT-------------IHYGRTHDFNGLT 114
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
++E TGTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D + +
Sbjct: 115 ALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHI 174
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+ L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + R S
Sbjct: 175 DRIEARLRNVLKGDNDIRSAKTSVS-MAVTHTERRLHQMMFADRDYER--KPILRFSADS 231
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P VTV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDM+YVVFH +NT +AY EFY
Sbjct: 232 --PVVTVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
I+H DG PISSE ER+RVIQCL+AA+ERRASE
Sbjct: 290 IKHTDGTPISSEPERQRVIQCLQAAVERRASE 321
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L D+ V+ A I++ G F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFY 289
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E AS E +E DR G
Sbjct: 290 IKHTDGTPISSEPERQRVIQCLQAAVERRAS---------------EGVRLELCTPDRQG 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
L ++V + NV AEI T A V +VTD AI +P
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTSTKTATNVFYVTD-----AIGNP 375
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 237/332 (71%), Gaps = 5/332 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D+T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMPTEEHTS 118
SSDGGWFMDVF+V D GKKI D + IDYI++ L + S VGV +HT+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTA 128
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TG DRPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS
Sbjct: 129 IELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLS 188
Query: 179 TIKELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+++ L N+LRG DD K +TS S G + +RRLHQ++F DRDYE A + S
Sbjct: 189 AMEDQLKNILRGCDDDEKEGRTSFS-MGFTHVDRRLHQMLFADRDYEGGIVATEIHDPPS 247
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
+P++TV + EK Y+V+T+R KDR KL+FDIVCTLTDMQYVVFH +++ A QE+Y
Sbjct: 248 FKPKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYY 307
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IRH+DG + +E E++RVI+CLEAAI RR SE
Sbjct: 308 IRHMDGCVLDTEGEKDRVIKCLEAAIRRRVSE 339
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +++ +V+ V ++ ++ ++ L D+ V+ A ISSD + +
Sbjct: 250 PKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYYIR 309
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + D + + LE ++R V E S+E DR GL SEV
Sbjct: 310 HMDGCVLDTEGEKDRVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + +V A + T ++A V +V D S
Sbjct: 359 RILRENGLSVSRAGVMTIGEQAMNVFYVRDAS 390
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/327 (56%), Positives = 239/327 (73%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KLI RM+ PRVVIDN+ C+ AT++KVDS +HGILL +QVL D+NL IKKAYIS+
Sbjct: 8 DEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSIKKAYISA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G KI D+ V+ YI+Q L + + + RS+ G+ T++E T
Sbjct: 68 DGKWFMDVFHVTDQNGNKIMDESVLKYIEQSL-GNIHYGRTNRSN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G+DR GL SEV AVLADL C+V +A++WTHN R A++++V D S+G AI+D ++++ I+
Sbjct: 120 GSDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIEL 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AK S+S +M+ ERRLHQ+MF DRDYER ++ S P V
Sbjct: 180 RLRNVLKGDNDIRSAKMSVS-MAVMHTERRLHQLMFVDRDYERTPI----LKLTSDNPLV 234
Query: 243 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E + Y+V+ ++ KDR KLLFDIVC LTDM+YVVFH +NT AY EFYIRH D
Sbjct: 235 TVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER+RVIQCL+AA+ERRASE
Sbjct: 295 GTPISSEPERQRVIQCLKAAVERRASE 321
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N +V+ V ++ +L ++ L D+ V+ A I++ G F +
Sbjct: 232 PLVTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIR 291
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + +QR+ A R+S GV +E DR GL +EV
Sbjct: 292 HKDGTPISSEPE----RQRVIQCLKAAVERRASEGV-------RLELCTEDRQGLLAEVM 340
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ NV AEI T + A + +VTD
Sbjct: 341 RTFRENGLNVTRAEISTIGNMATNIFYVTD 370
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 231/327 (70%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN C ATV+KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ DK VI+YI+Q L T + S G+ T++E T
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKT--GSNGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV+A++WTHN R AA++ V D ++G I+D +++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKT +S + + ERRLHQ+MF DRDYER ++ P V
Sbjct: 180 RLRNVLKGDNDIRSAKTMVS-MAVTHTERRLHQMMFADRDYERNPI----LQPSGDSPVV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ +DR KLLFD+VCTLTDM+Y+VFH + T AY EFYIRH D
Sbjct: 235 TVQNWVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFYIRHTD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER+RVIQCL+AA+ERR SE
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRVSE 321
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L D+ ++ A I + G F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFY 289
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E S E +E DR
Sbjct: 290 IRHTDGTPISSEPERQRVIQCLQAAVERRVS---------------EGVRLELCTLDRQC 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L ++V + NV AEI T D A V +VTD + G A DPK + ++++
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTTRDMALNVFYVTD-AIGNA-ADPKLIESVRQ 386
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 231/331 (69%), Gaps = 4/331 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C D+T++KVDS+NK GILL+V+QVL D++L+I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVF+V D GKKI D + IDYI++ L ++ VGV HT+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTA 128
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS
Sbjct: 129 IELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRAVADPTRLS 188
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
+++ L N+LRG ++ +TS S G + +RRLHQ++F DRDYE A S
Sbjct: 189 IMEDQLKNILRGCENDEAGRTSFS-MGFTHVDRRLHQMLFADRDYEGGIVATEVDYPPSI 247
Query: 239 RPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+P++TV E K Y+V+T+R KDR KL+FDIVCTLTDMQYVVFH +++ A QE+YI
Sbjct: 248 KPKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYI 307
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASE 328
RH+DG + +E E+ERVI+CLEAAI RR SE
Sbjct: 308 RHMDGCVLDTEGEKERVIKCLEAAIRRRVSE 338
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ++ +V+ V ++ ++ ++ L D+ V+ A ISSDG + +
Sbjct: 249 PKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYIR 308
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG V+D ++ ++R V E S+E DR GL SEV
Sbjct: 309 HMDGC------VLDTEGEKERVIKCLEAAIRRRV-----SEGLSLELCAKDRVGLLSEVT 357
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + V A + T ++A V +V D S
Sbjct: 358 RILRENGLAVSRAGVMTIGEQATNVFYVRDAS 389
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 234/334 (70%), Gaps = 7/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 27 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 86
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 87 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 146
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 147 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 206
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE +
Sbjct: 207 LSVMEEQLKNVLRGCEDDDKVARTSFS-MGFTHVDRRLHQMLFADRDYEGGGTTIEADYP 265
Query: 236 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S +P++T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE
Sbjct: 266 PSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQE 325
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
++IRH+DG + +E E+ERVI+CLEAAI RR SE
Sbjct: 326 YFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSE 359
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ID + + V ++ ++ ++ L D+ V+ A ISSDG + + +
Sbjct: 270 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 329
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + ++ + + + LE ++R V E S+E DR GL SEV
Sbjct: 330 HMDGCTLDNEGEKERVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 378
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S P + TI+ L
Sbjct: 379 RVLREHGLSVTRAGVSTVGEQAMNVFYVRDAS-----GKPVDMKTIEAL 422
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 234/334 (70%), Gaps = 7/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 28 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 87
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 88 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 147
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 148 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 207
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE +
Sbjct: 208 LSVMEEQLKNVLRGCEDDDKVARTSFS-MGFTHVDRRLHQMLFADRDYEGGGTTIEADYP 266
Query: 236 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S +P++T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE
Sbjct: 267 PSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQE 326
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
++IRH+DG + +E E+ERVI+CLEAAI RR SE
Sbjct: 327 YFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSE 360
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ID + + V ++ ++ ++ L D+ V+ A ISSDG + + +
Sbjct: 271 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 330
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + ++ + + + LE ++R V E S+E DR GL SEV
Sbjct: 331 HMDGCTLDNEGEKERVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 379
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S P + TI+ L
Sbjct: 380 RVLREHGLSVTRAGVSTVGEQAMNVFYVRDAS-----GKPVDMKTIEAL 423
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 234/334 (70%), Gaps = 7/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 9 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 129 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 188
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE +
Sbjct: 189 LSVMEEQLKNVLRGCEDDDKVARTSFS-MGFTHVDRRLHQMLFADRDYEGGGTTIEADYP 247
Query: 236 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S +P++T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE
Sbjct: 248 PSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQE 307
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
++IRH+DG + +E E+ERVI+CLEAAI RR SE
Sbjct: 308 YFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSE 341
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ID + + V ++ ++ ++ L D+ V+ A ISSDG + + +
Sbjct: 252 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + ++ + + + LE ++R V E S+E DR GL SEV
Sbjct: 312 HMDGCTLDNEGEKERVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S P + TI+ L
Sbjct: 361 RVLREHGLSVTRAGVSTVGEQAMNVFYVRDAS-----GKPVDMKTIEAL 404
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 233/327 (71%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN + ATV+KVDS KH ILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L T P + + T++E T
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGT---IHPGKTTGSNGL-----TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV+A++WTHN R A++++V D ++G I+D + + I+
Sbjct: 120 GTDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKT +S + + ERRLHQ+MF DRDYER K + ++ P V
Sbjct: 180 RLRNVLKGDNDIRSAKTMVSM-AVTHTERRLHQVMFADRDYER--KPI--LQPSGDSPVV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDM+Y+VFH +NT AY EFYIRH D
Sbjct: 235 TVQNWVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFYIRHTD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER+RVIQCL+AA+ERRASE
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRASE 321
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L D+ ++ A I++ G F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFY 289
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E AS E +E DR G
Sbjct: 290 IRHTDGTPISSEPERQRVIQCLQAAVERRAS---------------EGVRLELCTPDRQG 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L ++V + NV AEI T D A V +VTD A DPK + ++++
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTAGDMALNVFYVTDAVGNPA--DPKLIESVRQ 386
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 237/327 (72%), Gaps = 12/327 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS + G LL+ +QVL D+NL IKKAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E T
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELT 120
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + ++ +S P V
Sbjct: 181 RLRSVLKGDNDIRSAKTSVS-MAVTHTERRLHQMMFADRDYER--KPILKLNADNS-PAV 236
Query: 243 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD++ TLTDMQYVVFH +NT + AY EFYIRH D
Sbjct: 237 TVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSD 296
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSEAER+RVIQCL+AAI+RRASE
Sbjct: 297 GTPISSEAERQRVIQCLQAAIQRRASE 323
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N P V + N +V+ V ++ +L VI L D+ V+ A I++ F
Sbjct: 232 NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFY 291
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + + Q L+ A R+S GV +E DRPGL ++
Sbjct: 292 IRHSDGTPISSEAERQRVIQCLQA----AIQRRASEGV-------RLELCTEDRPGLLAD 340
Query: 133 VCAVLADLHCNV-------VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
V + NV AEI T D A V +VTD A D K + ++++
Sbjct: 341 VMRTFRENGLNVTRAEISTTRAEISTTRDMALNVFYVTDVVGNVA--DQKTIESVRQ 395
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/317 (59%), Positives = 230/317 (72%), Gaps = 3/317 (0%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P V +DN + TVIKVDS NK G LL+V+QVL D+NL +++AYISSDG WFMDVF+
Sbjct: 128 DPVLVAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFH 187
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
V D +GKK +V D IQQ L AS SLR SVGV EHT+IE TG DRPGL SE
Sbjct: 188 VTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSE 247
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ IK+LL VL+G
Sbjct: 248 VFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDI 307
Query: 193 DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDY 251
D + A T++S G +++RRLHQ+M+ DRDY+ + G D+ ++ VTV + I+K Y
Sbjct: 308 DKKSANTAVS-VGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDR-NKLLVTVDDCIDKGY 365
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 311
TV+ +R DRPKLLFD VCTLTDMQYVV+HG V EAYQE+YIRHVDG PISSEAER
Sbjct: 366 TVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAER 425
Query: 312 ERVIQCLEAAIERRASE 328
+RVI CLEAAI RR SE
Sbjct: 426 QRVIHCLEAAIRRRTSE 442
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V +D+ TV+ + ++ +L + L D+ V+ + ++G + +
Sbjct: 355 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 414
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + + LE A R+S G+ +E G DR GL S+V +
Sbjct: 415 DGSPISSEAERQRVIHCLEA----AIRRRTSEGI-------KLELCGEDRVGLLSDVTRI 463
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+ +V AE+ T +A V +VTD S G + + KE+ +L DD
Sbjct: 464 FRENGLSVNRAEVTTRGTQAMNVFYVTDVS-GNPVNSETIEAVRKEIGLTILHVKDD 519
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 237/327 (72%), Gaps = 12/327 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS + G LL+ +QVL D+NL IKKAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E T
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELT 120
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + ++ +S P V
Sbjct: 181 RLRSVLKGDNDIRSAKTSVS-MAVTHTERRLHQMMFADRDYER--KPILKLNADNS-PAV 236
Query: 243 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD++ TLTDMQYVVFH +NT + AY EFYIRH D
Sbjct: 237 TVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSD 296
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSEAER+RVIQCL+AAI+RRASE
Sbjct: 297 GTPISSEAERQRVIQCLQAAIQRRASE 323
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 19/176 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N P V + N +V+ V ++ +L VI L D+ V+ A I++ F
Sbjct: 232 NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFY 291
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + + Q L+ A R+S GV +E DRPGL ++
Sbjct: 292 IRHSDGTPISSEAERQRVIQCLQA----AIQRRASEGV-------RLELCTEDRPGLLAD 340
Query: 133 VCAVLADLHC------NVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
V + NV AEI T A V +VTD A D K + ++++
Sbjct: 341 VMRTFDVMRTFRENGLNVTRAEISTTRHMALNVFYVTDVVGNVA--DQKTIESVRQ 394
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 235/329 (71%), Gaps = 4/329 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL+V+QVL D+NL+I++AYI
Sbjct: 9 MDDEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L SLR SV V EHT+IE
Sbjct: 69 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQGAAEHTTIE 128
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVLA L CNVV +EIWTHN R A+VV++TD +TG I DP RL+ I
Sbjct: 129 LTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLTKI 188
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL +L G D R A T++S G ++ERRLHQ+M+ DRDY+ + +++
Sbjct: 189 KQLLLCILIGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYDVDDADCSSASERNR-- 245
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N ++K YTV+ +R DRPKL+FD VCTLTDMQYVV+H ++ EA QE++IRH
Sbjct: 246 FVTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRH 305
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
+DG PI+SEAER+R+I CLEAAI RR SE
Sbjct: 306 MDGSPINSEAERQRLINCLEAAIRRRTSE 334
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V ++N TV+ + ++ ++ + L D+ V+ A I ++G + +
Sbjct: 247 VTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRHM 306
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + +QRL A R+S GV +E DR GL S+V +
Sbjct: 307 DGSPINSEAE----RQRLINCLEAAIRRRTSEGV-------RLELCSEDRVGLLSDVTRI 355
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
+ +V AE+ T +A V VTD S+G+ +K + KE+ +L DD
Sbjct: 356 FRENGLSVTRAEVTTRGSQAVNVFFVTD-SSGHPVKSETIEAVRKEIGLTILNVNDD--- 411
Query: 197 AKTSLSPP 204
S SPP
Sbjct: 412 -AYSKSPP 418
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 232/327 (70%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KLI RMN PRVVIDN+ + AT++KVDS +HGILL ++VL D+NL IKKAYIS+
Sbjct: 8 DEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSIKKAYISA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G KI D+ V+ YI+Q L +L + + T++E T
Sbjct: 68 DGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGL--------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV +++WTHN R A++++V D S+G AI+D ++++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIEL 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AK S S +M+ ERRLHQ+MF DRDYER ++ S V
Sbjct: 180 RLRNVLKGDNDIRSAKISFS-MAVMHTERRLHQLMFVDRDYERAPI----LKLTSDNASV 234
Query: 243 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E + Y+V+ ++ KDR KLLFDIVC LTDM+YVVFH +NT AY EFYIRH D
Sbjct: 235 TVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER+RVIQCL+AA+ERRASE
Sbjct: 295 GTPISSEPERQRVIQCLKAAVERRASE 321
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V + N +V+ V ++ +L ++ L D+ V+ A I++DG F +
Sbjct: 234 VTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHK 293
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + +QR+ A R+S GV +E DR GL +EV
Sbjct: 294 DGTPISSEPE----RQRVIQCLKAAVERRASEGV-------RLELCTEDRQGLLAEVVRT 342
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ NV AEI T + A + +VTD AI +P
Sbjct: 343 FRENGLNVTRAEISTIGNMAKNIFYVTD-----AIGNP 375
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/338 (53%), Positives = 237/338 (70%), Gaps = 15/338 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS+++E L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE AV +++
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLS-IGSTHVDRRLHQMFFADRDYE----AVTKLD 243
Query: 235 DKSS---RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D +S P++TV + EK Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ +
Sbjct: 244 DSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
A QE++IRH DG + +E E+ERV++CLEAAI RR SE
Sbjct: 304 ASQEYFIRHKDGCTLDTEGEKERVVKCLEAAIHRRVSE 341
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +++ +VI V ++ ++ ++ L D+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + + LE A R S G S+E DR GL SEV
Sbjct: 312 HKDGCTLDTEGEKERVVKCLEA----AIHRRVSEG-------WSLELCAKDRVGLLSEVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
+L + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 361 RILREHGLSVSRAGVTTVGEQAVNVFYVKDAS-----GNPVDVKTIEAL 404
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 226/321 (70%), Gaps = 17/321 (5%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG WFM VFNV D
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG DRPGL SEVCA
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGY--ALPEDQFTSIELTGADRPGLLSEVCA 128
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
VLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL +V+RG
Sbjct: 129 VLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDVMRGDGTCN 188
Query: 196 KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS----SRPQVTVLNI-EKD 250
+ T +S ERRLH +M D E+A G ++ +RP+V V++ E+
Sbjct: 189 RGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVVVMDCAERR 242
Query: 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEFYIRHVDGLPIS 306
YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+YIRHVDG P+
Sbjct: 243 YTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIRHVDGHPVR 302
Query: 307 SEAERERVIQCLEAAIERRAS 327
S+AER R+++CLEAA+ERRAS
Sbjct: 303 SDAERARLVRCLEAAVERRAS 323
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/338 (52%), Positives = 236/338 (69%), Gaps = 15/338 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS+++E L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE AV +++
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLS-IGSTHVDRRLHQMFFADRDYE----AVTKLD 243
Query: 235 DKSS---RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D +S P++TV + EK Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ +
Sbjct: 244 DSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
A QE++IRH DG + +E E+ER ++CLEAAI RR SE
Sbjct: 304 ASQEYFIRHKDGCTLDTEGEKERXVKCLEAAIHRRVSE 341
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P++ +++ +VI V ++ ++ ++ L D+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + ++ R E S+E DR
Sbjct: 312 HKDGCTLDTEGEKERXVKCLEAAIHRR------------------VSEGWSLELCAKDRV 353
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
GL SEV +L + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 354 GLLSEVTRILREHGLSVSRAGVTTVGEQAVNVFYVKDAS-----GNPVDVKTIEAL 404
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/327 (53%), Positives = 234/327 (71%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KVDS KHGIL+ +QVL+D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ DK V+ YI+Q L + + + + + T +E T
Sbjct: 68 DGRWFMDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNAKTNHSNGL--------TILELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++G I+D +R+STI+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R ++ S P V
Sbjct: 180 RLRNVLKGDNDIRNAKTSVT-NAVLHAERRLHQMMYTDRDYQRNPI----LKFASVTPIV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH + T +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHRD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER RVIQCL+AA+ERRA E
Sbjct: 295 GTPISSEPERHRVIQCLQAAVERRAYE 321
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N +V+ + ++ +L V+ L D+ V+ A I + F +
Sbjct: 232 PIVTVQNWAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIR 291
Query: 75 DCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLF 130
DG I + VI +Q +E A E +E DR GL
Sbjct: 292 HRDGTPISSEPERHRVIQCLQAAVERRAY---------------EGVRLELCTEDRQGLL 336
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+EV + NV AEI T + A+ V +VTD + GY + DPK + ++++
Sbjct: 337 AEVMRTFRENGMNVTRAEISTIGNMASNVFYVTD-AVGYPV-DPKIVESVRQ 386
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 233/335 (69%), Gaps = 11/335 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY RMNPPRV +DN +C D T+IKVDSVNK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L + +++ VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T A+ + R
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQAVDEANR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFS-MGSTHMDRRLHQMLFADRDYE--SYAVAREVDS 244
Query: 237 --SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP++T+ EK Y+V++++ KDR KL+FDIVCTLTDMQYVVFH V++ A Q
Sbjct: 245 PPSLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQ 304
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E++IRH+DG + ++ E+ERVIQC+EAAI RR SE
Sbjct: 305 EYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSE 339
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ I+ +V+ V ++ ++ ++ L D+ V+ A +SSDG + + + +
Sbjct: 250 PKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + Q +E A R S GV S+E DR GL SEV
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEA----AIRRRVSEGV-------SLELCAKDRVGLLSEVT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + V A + T ++A V +V D S
Sbjct: 359 RILRENGLTVCRAGVSTRGEQALNVFYVRDAS 390
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 236/330 (71%), Gaps = 18/330 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS ++GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E T
Sbjct: 68 DGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D S+G I D +R+S I+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEG 179
Query: 183 LLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L NVL G +D AKT +S +M+ ERRLHQ+MF+DRDYER R + + P
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYER------RSNKQETSPT 233
Query: 242 --VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
VTV N E+ Y+V+ + +DR KLLFD+VCTLTDM+Y VFH +NT +A+ EFYIR
Sbjct: 234 VVVTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIR 293
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
H DG PISSEAER+RVI CLEAA+ERRA E
Sbjct: 294 HKDGSPISSEAERQRVILCLEAAVERRALE 323
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/328 (53%), Positives = 235/328 (71%), Gaps = 14/328 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS ++GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E T
Sbjct: 68 DGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D +G I D R+S I+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEG 179
Query: 183 LLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L NVL G +D AKT ++ +M+ ERRLHQ+MF+DRDYER K ++S
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYERRSKK----HERSPMVV 235
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VTV N E+ Y+V+ + +DR KLLFD+VCTLTDM+Y VFH +NT +A+ EFYIRH
Sbjct: 236 VTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHK 295
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER+RVIQCLEAA+ERRA E
Sbjct: 296 DGSPISSEAERQRVIQCLEAAVERRALE 323
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 178/335 (53%), Positives = 232/335 (69%), Gaps = 11/335 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY RMNPPRV +DN +C D T+IK+DSVNK GILL+V+Q+L D++ VI KAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID I++ L + +++ VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDY 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T DPKR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQVADDPKR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFS-MGSTHMDRRLHQMLFADRDYE--SYAVAREVDS 244
Query: 237 --SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP++T+ EK Y+V++++ KDR KL+FDIVCTLTDMQYVVFH V++ A Q
Sbjct: 245 PPSLRPRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQ 304
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E++IRH+DG + ++ E+ERVIQC+EAAI RR SE
Sbjct: 305 EYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSE 339
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ I+ +V+ V ++ ++ ++ L D+ V+ A +SSDG + + + +
Sbjct: 250 PRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + Q +E ++R V E S+E DR GL SEV
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEA------AIRRRV-----SEGVSLELCAKDRVGLLSEVT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + +V A + T ++A V +V D S
Sbjct: 359 RILRENGLSVCRAGVSTRGEQALNVFYVRDAS 390
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/334 (52%), Positives = 228/334 (68%), Gaps = 7/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C + T+IKVDS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMD+F+V D GKKI D + IDYI++ L L++ VGV ++
Sbjct: 69 SSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDY 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A VV+V D++T + DP R
Sbjct: 129 TAIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVDDPTR 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG +D KA + G + +RRLHQ+ F DRDYE VE
Sbjct: 189 LSVMEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEG-GGVTNEVEYP 247
Query: 237 SS-RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
SS +P++TV EK Y+V+++ KDR KLLFDIVCTLTDMQYVVFH +++ A QE
Sbjct: 248 SSFKPKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQE 307
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+YIRH+DG + +E E+ERVI+CLEAAI RR E
Sbjct: 308 YYIRHMDGCTLDTEGEKERVIKCLEAAIRRRVCE 341
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ++ +V+ V ++ +L ++ L D+ V+ A ISSDG + + +
Sbjct: 252 PKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQEYYIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + + LE ++R V E S+E DR GL SEV
Sbjct: 312 HMDGCTLDTEGEKERVIKCLEA------AIRRRVC-----EGLSLELCAKDRVGLLSEVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 361 RVLRENGLSVTRAGVTTVGEQAMNVFYVRDSS-----GNPVDMKTIEAL 404
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 230/342 (67%), Gaps = 15/342 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRVVIDN AT+IK+DS N+HGILL V+QVL D++L I KA+I
Sbjct: 14 FDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAFI 73
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D DG K+ D++VI +I+ + A S ++GV EHT+IE
Sbjct: 74 SSDGGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLST 179
TG DRPGL SE+ AVLA L CNVV AE+WTHN R A +V+VTDH G +KDP +L
Sbjct: 134 LTGNDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCH 193
Query: 180 IKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDR-----------DYERVE 227
IK++L V++G D + A+T + G+ + ERRLHQ+M D+
Sbjct: 194 IKQMLGQVMKGDSLDGKTARTDFA-MGLTHTERRLHQMMSADKEEEMEVAEEEAALSPAP 252
Query: 228 KAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
++ D RP VTV N +EK Y+V+T++ DRPKLLFD VCTLTDM+YVVFH +++
Sbjct: 253 TSISDSVDYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDS 312
Query: 287 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
A+QE+YIRH+DG +++E ER+RV++CLEAAI RRAS+
Sbjct: 313 EGPNAFQEYYIRHLDGYTLNTETERQRVVRCLEAAILRRASQ 354
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N +V+ V ++ +L + L D+ V+ A I S+G + +
Sbjct: 265 PTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDSEGPNAFQEYYIR 324
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + LE A R+S GV +E + DR GL S+V
Sbjct: 325 HLDGYTLNTETERQRVVRCLEA----AILRRASQGV-------RLELSTQDRIGLLSDVT 373
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + +V AE+ T +D A V +VTD + G
Sbjct: 374 RIFRENGLSVARAEVTTRDDMAVNVFYVTDANGG 407
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/327 (53%), Positives = 230/327 (70%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KV S ++G LL IQVL D+NL+IKKAYISS
Sbjct: 8 DEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V +G KI D+ ++ YI+Q L + + + + + V+ E +
Sbjct: 68 DGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVL--------ELS 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D +G I+D +++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEV 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS+S +M+ ERRLHQ+MF DRDYER ++ S V
Sbjct: 180 RLRNVLKGDNDIRSAKTSVSMS-VMHSERRLHQMMFADRDYERTPI----LKLTSDNTLV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH +NT +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER+RVIQCL+A++ERRASE
Sbjct: 295 GTPISSEPERQRVIQCLKASVERRASE 321
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/327 (51%), Positives = 233/327 (71%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+++T++K DS KHGILL+ +Q+L+D+NL IKKAY+SS
Sbjct: 8 DEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ V+ YI+Q L + + + R+ + T++E
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGL--------TALELK 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+L C+VV A++WTHN R A++++V D TG +I+D ++++ ++
Sbjct: 120 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L VL+G D R A TS+S +++ ERRLHQ+MF DRDY+ + + S P V
Sbjct: 180 RLRYVLQGDSDIRSATTSIS-DAVIHPERRLHQMMFADRDYQM--NPIFKF--SSETPVV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH +NT +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER+RVIQCL+AA+ERR+ E
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRSCE 321
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/327 (53%), Positives = 233/327 (71%), Gaps = 14/327 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KVDS KHGIL+ +QVL+D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ V+ YI+Q L + + S + + T +E T
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGL--------TILELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++ I+D +R+STI+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R + + S P V
Sbjct: 180 RLRNVLKGDNDIRNAKTSVT-NAVLHAERRLHQMMYTDRDYQR--NPIFKF--SSDTPIV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LT+M+YVVFH + T +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PISSE ER RVIQCL+AA+ERRA E
Sbjct: 295 GTPISSEPERHRVIQCLQAAVERRAFE 321
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E +E DR GL +EV + NV AEI T D A+ V +VTD + GY DP
Sbjct: 321 EGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDMASNVFYVTD-AIGYP-ADP 378
Query: 175 KRLSTIKE 182
K + ++++
Sbjct: 379 KIVESVRQ 386
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/338 (52%), Positives = 236/338 (69%), Gaps = 16/338 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV A+LADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRG--YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS ++E L NVLRG +D + A+TSLS G + +RRLHQ+ F D+DYE AV +++
Sbjct: 189 LSAMEEQLNNVLRGCEQEDEKFARTSLS-IGSTHVDRRLHQMFFADKDYE----AVTKLD 243
Query: 235 DKSSR---PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D +SR P++TV + EK Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ +
Sbjct: 244 DFASRGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
A QE++IRH DG + + E+ERV++CLEAAI RR SE
Sbjct: 304 ASQEYFIRHKDGCTLDT-GEKERVVKCLEAAIHRRVSE 340
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +++ +VI V ++ ++ ++ L D+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + E ++R+ A R S G S+E DR GL SEV
Sbjct: 312 HKDGCTLDTGE-----KERVVKCLEAAIHRRVSEG-------WSLELCAKDRVGLLSEVT 359
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
+L + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 360 RILREHGLSVSRAGVTTVGEQAVNVFYVKDAS-----GNPVDVKTIEAL 403
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 231/335 (68%), Gaps = 9/335 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY R+NPPRV +DN++C D T+IK DS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR----SSVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKR 187
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE- 234
LS ++E L ++LRG DD + A+TS + G + +RRLHQ++F DRDYE V V+
Sbjct: 188 LSIMEEQLNHILRGCEDDEKVARTSFT-MGFTHMDRRLHQMLFADRDYESVGLTTTDVDC 246
Query: 235 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP++ + I EK Y+V+++R KDR KL+FDIVCTLTDM+YVVFH +++ A Q
Sbjct: 247 PPSFRPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQ 306
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E++IRH+DG + +E E+ERVI+C+EAAI+RR SE
Sbjct: 307 EYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSE 341
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P++ I+ +V+ V ++ ++ ++ L D+ V+ A ISS+G + + +
Sbjct: 252 PKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIR 311
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + I+ QR R S GV S+E DR
Sbjct: 312 HMDGCTLDTEGEKERVIKCIEAAIQR-----------RVSEGV-------SLELCAKDRV 353
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
GL SEV +L + V A + T ++ V +V D S
Sbjct: 354 GLLSEVTRILRENGLRVSRAGVSTVGEKGLNVFYVRDAS 392
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 229/335 (68%), Gaps = 9/335 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY R+NPPRV +DN++C D T+IK DS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L ++S VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KR
Sbjct: 129 TVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKR 187
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE- 234
LS I+E L ++LRG DD + A+TS S GI + +RRLHQ++F DRDYE V+
Sbjct: 188 LSIIEEQLNHILRGCEDDEKVARTSFS-MGITHMDRRLHQMLFADRDYESAGVTTTDVDC 246
Query: 235 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
RP + + I EK Y+V++++ KDR KL+FDIVCTLTDM+YVVFH +++ A Q
Sbjct: 247 PPCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQ 306
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
E++IRH+DG + +E E+ER I+C+EAAI+RR SE
Sbjct: 307 EYFIRHMDGCTLDTEGEKERAIKCIEAAIQRRVSE 341
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P + I+ +V+ V ++ ++ ++ L D+ V+ A ISS+G + + +
Sbjct: 252 PNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIR 311
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + I+ QR R S GV S+E DR
Sbjct: 312 HMDGCTLDTEGEKERAIKCIEAAIQR-----------RVSEGV-------SLELCAKDRV 353
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
GL SEV +L + V A + T ++ V +V D S
Sbjct: 354 GLLSEVTRILRENGLTVSRAGVSTVGEKGLNVFYVRDAS 392
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/337 (52%), Positives = 228/337 (67%), Gaps = 11/337 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV +DN++ AT++KVDSVNK+G LL+V+QVL D+ L I +AYISS
Sbjct: 18 DEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYISS 77
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+I
Sbjct: 78 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 137
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL CN+V +E+WTH+ R AA+V+VTD T AI+DP RL T
Sbjct: 138 ELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARLDT 197
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV---EKAVG-RVED 235
+K LL +VLRG +KA + PG+ + RRLHQ+M DR R + VG R E
Sbjct: 198 VKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVGERGEA 257
Query: 236 KSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
+ + V+ + E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EA
Sbjct: 258 SGAGGGMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEA 317
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
YQE+YIRH+D S +R+R+ +CLEAAI+RR +E
Sbjct: 318 YQEYYIRHLDDSTGGSGEDRDRLCRCLEAAIQRRYTE 354
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 229/338 (67%), Gaps = 14/338 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R++PPRV IDN+ C D T++KVDS NKHGILL+++QVL D+ LVI K+YI
Sbjct: 9 FDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLELVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---T 113
SDGGWFMDVF+V D G K+ D+ +I YIQQ L + + L++ +G + P +
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVS 128
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+D
Sbjct: 129 TEHTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRD 188
Query: 174 PKRLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAV 230
P+RL+ ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER
Sbjct: 189 PERLAHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CC 245
Query: 231 GRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G + S R QV++ N EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ +
Sbjct: 246 GGCDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGS 305
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
A QE++IR +DG + +++ER RV QCL AAIERR +
Sbjct: 306 IAVQEYFIRQMDGCTLGTQSERNRVAQCLIAAIERRVT 343
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/338 (52%), Positives = 227/338 (67%), Gaps = 15/338 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIK-----VDSVNKHGILLQVIQVLNDVNLVI 55
D EY L R++PP VVIDN +C DAT+IK VDS NKHGILL+V+QVL D++L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVG----V 110
KAYISSDGGWFMDVF+V D G K+ D+ +IDYIQQ L S +++ +G +
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSL 122
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E T+IE G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG
Sbjct: 123 RSNTEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGP 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
I+D K+L+ IK L L+G + + +KT + P +++ ERRLHQIM D + E
Sbjct: 183 IEDEKKLAVIKARLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSADFAAIQPESTN 241
Query: 231 GRVE--DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
V DK+ RP ++V N EK Y+V+ +R KDRPKLLFD VCTLTDM+YVVFH + +
Sbjct: 242 TFVAAADKT-RPAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSE 300
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR 325
+ AYQE+YIR +DG + SEAE+E V++CLEAAIERR
Sbjct: 301 GSFAYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERR 338
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + + N +V+ V ++ +L + L D+ V+ A I S+G + + +
Sbjct: 252 PAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +Y+ + LE A R+ G+ +E DR GL S+V
Sbjct: 312 LMDGCTLKSEAEQEYVVKCLEA----AIERRTGGGI-------RLELCTKDRVGLLSDVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+ + +V A++ T D+A V +VTD S
Sbjct: 361 RIFRENGLSVTRADVSTQGDKAVNVFYVTDAS 392
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/338 (51%), Positives = 222/338 (65%), Gaps = 15/338 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIK-----VDSVNKHGILLQVIQVLNDVNLVI 55
D EY L R++PP VVIDN +C DAT+IK VDS NKHGILL+V+QVL D++L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGV 110
KAYISSDGGWFMDVF+V D G K+ D+ +IDYIQQ L L V +
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSL 122
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E T+IE G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG
Sbjct: 123 RSNTEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGP 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
I+D K+L+ IK L L+G + + +KT + P +++ ERRLHQIM D + E
Sbjct: 183 IEDEKKLAVIKARLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSADFAAIQPESTN 241
Query: 231 GRVE--DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
V DK+ RP ++V N EK Y+V+ +R DRPKLLFD VCTLTDM+YVVFH + +
Sbjct: 242 TFVAAADKT-RPAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSE 300
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR 325
+ AYQE+YIR +DG + SEAE+E V++CLEAAIERR
Sbjct: 301 GSFAYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERR 338
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + + N +V+ V ++ +L + L D+ V+ A I S+G + + +
Sbjct: 252 PAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +Y+ + LE A R+ G+ +E DR GL S+V
Sbjct: 312 LMDGCTLKSEAEQEYVVKCLEA----AIERRTGGGI-------RLELCTKDRVGLLSDVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+ + +V A++ T D+A V +VTD S
Sbjct: 361 RIFRENGLSVTRADVSTQGDKAVNVFYVTDAS 392
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 208/287 (72%), Gaps = 7/287 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G V
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERGGVAAA 252
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
++ +V V++ E+ YTV+ +R +DRP+LLFD + LTD+ YVVFHG
Sbjct: 253 KAKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHG 299
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/340 (51%), Positives = 225/340 (66%), Gaps = 14/340 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ RMNPPRV +DN + AT++KVDS NK+G LL+V+QVL ++ L IK+AYISS
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTELKLTIKRAYISS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRS-SVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+ L + SF AP RS V T+I
Sbjct: 72 DGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAI 131
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI D RL T
Sbjct: 132 ELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDT 191
Query: 180 IKELLFNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRDYERVE-KA 229
+K LL ++LRG D A+ + P + RRLHQ+M DDR + +
Sbjct: 192 VKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPSS 251
Query: 230 VGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
RP V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V
Sbjct: 252 SSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEG 311
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+EAYQE+YIRH+D P++S ER+R+ +CLEAAI+RR +E
Sbjct: 312 SEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTE 351
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/338 (52%), Positives = 225/338 (66%), Gaps = 10/338 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
M DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L IK+AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHT 117
SSDG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 STIKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRD-----YERVEKAVG 231
T + LL +VLRG D + A+ ++S + + RRLHQ+M DR E
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARRDGEGEGEGDGE 251
Query: 232 RVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R + P V V + E+ YT++ +R +DR KLLFD VCTLTDMQYVVFHG V +E
Sbjct: 252 RERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSE 311
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
AYQE+YIRH+D SS ERER+ + LEAAI+RR +E
Sbjct: 312 AYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTE 349
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ T++ V ++ +L + L D+ V+ + ++G + +
Sbjct: 260 PVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 319
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
D + E + +++ LE A R + G+ +E DR GL S+V
Sbjct: 320 HLDDRAASSGEERERLRRGLEA----AIQRRYTEGL-------RLELCCEDRVGLLSDVT 368
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V + +V +AE+ T RAA V +V D S+G
Sbjct: 369 RVFREHGLSVTHAEVGTRGARAANVFYVVDASSG 402
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 222/338 (65%), Gaps = 10/338 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
M DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L IK+AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHT 117
SSDG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDRD-----YERVEKAVG 231
T + LL +VLRG +KA + ++ RRLHQ+M DR E
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARRDGEGEGEGDGE 251
Query: 232 RVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R + P V V + E+ YT++ +R +DR KLLFD VCTLTDMQYVVFHG V +E
Sbjct: 252 RERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSE 311
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
AYQE+YIRH+D SS ERER+ + LEAAI+RR +E
Sbjct: 312 AYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTE 349
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ T++ V ++ +L + L D+ V+ + ++G + +
Sbjct: 260 PVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 319
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
D + E + +++ LE A R + G+ +E DR GL S+V
Sbjct: 320 HLDDRAASSGEERERLRRGLEA----AIQRRYTEGL-------RLELCCEDRVGLLSDVT 368
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V + +V +AE+ T RAA V +V D S+G
Sbjct: 369 RVFREHGLSVTHAEVGTRGARAANVFYVVDASSG 402
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/266 (59%), Positives = 197/266 (74%), Gaps = 9/266 (3%)
Query: 68 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
M VFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 60
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 61 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 120
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 243
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V + P V+
Sbjct: 121 LSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---NPTPVVS 176
Query: 244 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 302
V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+YIRH+DG
Sbjct: 177 VVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDG 236
Query: 303 LPISSEAERERVIQCLEAAIERRASE 328
P++SEAER+RVIQCLEAAIERR SE
Sbjct: 237 SPVNSEAERQRVIQCLEAAIERRVSE 262
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 160 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 219
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 220 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 268
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 269 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 327
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 328 QEIGQTVLQVKGHPDHRKSPPQESP 352
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/332 (50%), Positives = 226/332 (68%), Gaps = 8/332 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ MNPPRV +DN + AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 13 DEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYISS 72
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEE--HTSI 119
DG WFMDVF+V+D +G K+ D +VID I+Q L + SF + R VGV E T I
Sbjct: 73 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDRC-VGVEAEAEAAQTVI 131
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL +L CN+ +E+WTH+ R AA+++VTD TG +I++P+RL T
Sbjct: 132 ELIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPERLDT 191
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIM--NRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+K LL +VLRG +KA + + +RRLHQ+M DR R + +D+S
Sbjct: 192 VKRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDAVADDRS 251
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQY+VFHG V +EAYQE+Y
Sbjct: 252 L-PVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAYQEYY 310
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IRH+D +S+ +RE++ +CLEAAI+RR +E
Sbjct: 311 IRHLDDGAAASDEDREQLRRCLEAAIQRRNTE 342
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 225/348 (64%), Gaps = 22/348 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK--------VDSVNKHGILLQVIQVLNDVNLV 54
DE+ KL+ RMNPPRV +DN + AT++K VDS NK+G LL+V+QVL ++ L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMP 112
IK+AYISSDG WFMDVF+V+D DG K+ D +VID I+ L + SF AP RS
Sbjct: 72 IKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAE 131
Query: 113 TEE-HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
T+IE G DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI
Sbjct: 132 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAI 191
Query: 172 KDPKRLSTIKELLFNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRD 222
D RL T+K LL ++LRG D A+ ++ P + RRLHQ+M DDR
Sbjct: 192 DDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRA 251
Query: 223 YERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
+ + + P V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVF
Sbjct: 252 AAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVF 311
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
HG V +EAYQE+YIRH+D P++S ER+R+ +CLEAAI+RR +E
Sbjct: 312 HGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTE 359
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 223/344 (64%), Gaps = 20/344 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ LI R+ PPRV IDN C D TV+KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---T 113
SDGGWFMDVF+V D G K+ D+ +I YIQQ L T+ A + L++ + V P +
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVS 128
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT++E TG DRPG+ SE+ AVLA+L C+V A WTHN RAA ++++ D +G I D
Sbjct: 129 TDHTAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITD 188
Query: 174 PKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+L+ ++E L NV+ G + R + + G + ERRLHQ+M DY E
Sbjct: 189 SNKLAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDY---EPCC 245
Query: 231 GRVE-DKSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
G + D + + T +++ EK Y+V+ MRS DRPKLLFD +C LTDMQYVVFH
Sbjct: 246 GCTDGDAAHQRNCTKIHVSIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAA 305
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
V++ T A QE++IRH DG + +E+ER ++ +CL AA ERRAS
Sbjct: 306 VSSKGTMARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRAS 349
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/348 (44%), Positives = 225/348 (64%), Gaps = 20/348 (5%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+N P RV IDN + D T++KVDS+NK G+LL+V+Q+L D+NL I K+
Sbjct: 9 FDPDFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTDLNLSISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------ 112
YIS D GWFMDVF+V D + K+ D++VI+ IQQ + T S ++ V
Sbjct: 69 YISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTKGPDNSAKTRRYVNKLLNSDN 128
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ EHT+IE TGTDRPGLFSE+ A LADLHCNVV A W+HN R A + +++D ST I+
Sbjct: 129 SGEHTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYISDQSTDSPIE 188
Query: 173 DPKRLSTIKELLFNVLRG--------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
DP RL+ I+E L VLR + + + +S N ERRLHQ++ +DY+
Sbjct: 189 DPHRLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQLLVSVKDYD 248
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIE----KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
+++ R + + T ++IE K Y+++++ KDRP+L+FD VCTLTDMQYV+F
Sbjct: 249 WTSESISRRPKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCTLTDMQYVIF 308
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
H +++ + A+QE++IRHV+G ++S+ ++ RV++CLEAAIERR E
Sbjct: 309 HASISSKKDNAFQEYFIRHVNGYALNSDYDKHRVVKCLEAAIERRVCE 356
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/341 (51%), Positives = 226/341 (66%), Gaps = 18/341 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 15 DEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+I
Sbjct: 75 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 134
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI DP RL T
Sbjct: 135 ELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDPARLDT 194
Query: 180 IKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE---- 234
+K LL +VLRG D + A+ ++S + + RRLHQ+M DR R G E
Sbjct: 195 VKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSARREGGGDGDGEEERE 254
Query: 235 ------DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
+ + P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V
Sbjct: 255 RGEASGNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAE 314
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+EAYQE+YIRH+D SS +R+R+ + LEAAI+RR +E
Sbjct: 315 GSEAYQEYYIRHLDD---SSGEDRDRLCRGLEAAIQRRCTE 352
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 221/329 (67%), Gaps = 24/329 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGNKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS-------- 231
Query: 238 SRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY
Sbjct: 232 --PIVSVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERR 325
+RH DG P+SSE ER+R+IQCL+AAIERR
Sbjct: 290 VRHSDGHPVSSEPERQRLIQCLQAAIERR 318
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 218 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAI 277
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 278 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 326
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV VL + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 327 LCTADRPGLLAEVTRVLRENGLNIARAEISTKDGVARNVFYVTD-ANGNLI-DPEIIQSI 384
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 385 REKI-----GIDDL 393
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 220/344 (63%), Gaps = 19/344 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ L+ R+ PPRV +DN T D T+IKVDS NK GILL+++QVL D++LVI K+YI
Sbjct: 10 IDAEFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MPT 113
SSDGGWFM+VF+V D G K+ D +I YIQQ L D S S + +
Sbjct: 70 SSDGGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYAS 129
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT++E TGTDRPGL SE+ AVL+ L C+V + +WTHN+RAA+++++ D G I D
Sbjct: 130 TDHTAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITD 189
Query: 174 PKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPG-IMNRERRLHQIMFDDRDYERVEKA 229
PKRL+ ++E L NV+ G + R + + PG + RRLHQ+M+ + DYE +
Sbjct: 190 PKRLAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGC 249
Query: 230 VGRVEDKSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
G + R T +++ EK Y+V+ +RS+DRPKLLFD +C LTDMQYVVFH
Sbjct: 250 NG--GGLAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAA 307
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
V+ T A QE++IR DG + +E+ER ++ QCL AAIERR S
Sbjct: 308 VSAKGTMADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVS 351
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 221/330 (66%), Gaps = 24/330 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS-------- 231
Query: 238 SRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY
Sbjct: 232 --PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRA 326
+RH DG P+SSE ER+R+IQCL+AAIERR
Sbjct: 290 VRHSDGHPVSSEPERQRLIQCLQAAIERRT 319
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 218 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAI 277
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 278 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 326
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV +L + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 327 LCTADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTD-ANGNLI-DPEIIKSI 384
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 385 REKI-----GIDDL 393
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 221/330 (66%), Gaps = 24/330 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS-------- 231
Query: 238 SRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY
Sbjct: 232 --PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRA 326
+RH DG P+SSE ER+R+IQCL+AAIERR
Sbjct: 290 VRHSDGHPVSSEPERQRLIQCLQAAIERRT 319
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 218 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAI 277
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 278 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 326
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV +L + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 327 LCTADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTD-ANGNLI-DPEIIKSI 384
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 385 REKI-----GIDDL 393
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/361 (45%), Positives = 226/361 (62%), Gaps = 35/361 (9%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ +L R+ P RV IDN + D +V+KVDSVNK G+LL+V+QVL D+NL I K+
Sbjct: 9 FDPDFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTDLNLTISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG-VMPT 113
YISSD GWFMDVF+V D GKK+ D+ VIDYI Q + ET + P +S V V
Sbjct: 69 YISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATP--KSYVNDVFEG 126
Query: 114 E---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E EHT+IE +GTDRPGLFSE+ A L DLHCN+V A W+HN R A V +++D ST
Sbjct: 127 EHSSEHTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISDQSTDTP 186
Query: 171 IKDPKRLSTIKELLFNVLRG------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
I DP RL+TI++ L V+R + + + N ERRLHQ+M RD++
Sbjct: 187 IDDPHRLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLMLSARDFD 246
Query: 225 ------------RVEKAVGRVEDKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDI 268
R + G D + TV++I EK Y+++++ KDRP+L+FD
Sbjct: 247 GPLGSSITGSGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRPRLMFDT 306
Query: 269 VCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDMQYV+FH + G A+QE++IR++DG +++E+E+ERVI+CLEAAIERR
Sbjct: 307 VCTLTDMQYVIFHASIGAGDDGYAFQEYFIRYIDGYALNTESEKERVIKCLEAAIERRVC 366
Query: 328 E 328
E
Sbjct: 367 E 367
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 229/356 (64%), Gaps = 30/356 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D ++ L R+ P V IDN + D TV+KVDSVNK G+LL+V+QVL D+NL I K YI
Sbjct: 9 FDPDFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVM----PTE 114
SSD GWFMDVF+V D GKK+RD+ VI+YIQQ + D S+ P+ R+ + +
Sbjct: 69 SSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNNIFEADHSS 128
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT+IE +GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I+DP
Sbjct: 129 EHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDP 188
Query: 175 KRLSTIKELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMFDDR 221
RL++I++ L VLR + R+ KT L G + N ERRLHQ+M R
Sbjct: 189 HRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVR 248
Query: 222 DYE----RVEKAVGRVEDK-SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDM 275
D++ G +K S+ V++ N +K+Y+++ + KDR +L+FD +CTL DM
Sbjct: 249 DFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDM 308
Query: 276 QYVVFHGMVNT---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
QYV+FH V++ GR A+QE++IRH DG ++E+E+ERVI+CLEAAIERR SE
Sbjct: 309 QYVIFHASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSE 362
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 29/349 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ LI R+ PPRV IDN D T++K DS NKHGILL+++QVL D++LVI K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT------- 113
SSDGGWFMDVF+V D G K+ D+ +I YIQQ L A R +PT
Sbjct: 69 SSDGGWFMDVFHVTDQLGNKLTDESLILYIQQAL-----CANRRRGVSKELPTCLNREVR 123
Query: 114 -----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
EHT++E GTDRPGL SE+ AVL +L C+V A WTHN RAA+++++ D G
Sbjct: 124 PRHVSTEHTTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRG 183
Query: 169 YAIKDPKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNR-ERRLHQIMFDDRDYE 224
I DPKRL+ ++E L NV+ G + R + + PG ERRLHQ+M+ + DYE
Sbjct: 184 GPITDPKRLAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANIDYE 243
Query: 225 RVEKAVGRVEDKSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
+ G + R T ++ EK Y+V+ +RS+DRPKLLFD +C LTDMQYV
Sbjct: 244 PCQGCNG--GGAAHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQYV 301
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VFH +V++ T A QE++IR DG + +++ER ++ QCL AAIERR S
Sbjct: 302 VFHAVVSSKGTMADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVS 350
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/350 (48%), Positives = 225/350 (64%), Gaps = 28/350 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF-----APSLRSSVGVMPTEE 115
+SDGGWFMDVF+V+D G+KI D + I YI++ L +++ + S SVG+ +
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGD 124
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE G DR GL SE+ AVLADL CNV+ AE+WTH R A VV+V D +TG AI DP
Sbjct: 125 HTAIELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPD 184
Query: 176 RLSTIKELLFNVLR----------------GYDDFRKAKTSLSPPGIMNRERRLHQIMFD 219
R++ +++ L +VLR + +F A S +P + +RRLHQ+M
Sbjct: 185 RVARVEDRLRHVLRGYGGGGGAGDDDDGSGAHANF--AAASSTPHHV---DRRLHQLMHA 239
Query: 220 DRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
D D + A + RP VTV + EK Y+V+ ++ KDR KLLFDIVCTLTDM+YV
Sbjct: 240 DVDAVHGDGAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYV 299
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
VFH V++ QE YIR DG + + E E+VI+CLEAAI RR SE
Sbjct: 300 VFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAEKVIRCLEAAISRRVSE 348
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/201 (70%), Positives = 167/201 (83%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN TC +A+VI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 126
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +
Sbjct: 127 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 186
Query: 181 KELLFNVLRGYDDFRKAKTSL 201
K+LL NVL+G + R+AKT L
Sbjct: 187 KQLLCNVLKGSNKSREAKTLL 207
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%)
Query: 257 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 316
+S++ LLFD VCTLTDMQYVVFH V+ EAYQE+YIRH+DG P+ S+AER+RVIQ
Sbjct: 199 KSREAKTLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQ 258
Query: 317 CLEAAIERRASE 328
CLEAAIERR SE
Sbjct: 259 CLEAAIERRVSE 270
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 40 ILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99
+L + L D+ V+ A + ++G + + DG ++ D +QR+
Sbjct: 206 LLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKS----DAERQRVIQCLE 261
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
A R S G+ +E TDR GL S+V + + +V AE+ T +A
Sbjct: 262 AAIERRVSEGL-------KLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNT 314
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELL 184
HV D S GY + D K + +I+E +
Sbjct: 315 FHVRDAS-GYPV-DAKTIDSIREAI 337
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/366 (44%), Positives = 224/366 (61%), Gaps = 41/366 (11%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ L R++ P RV +DN + TV+KVDSVNK G+LL+V+Q+L D+NL I K+
Sbjct: 9 FDPEFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTDMNLQICKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM------- 111
+ISSD GWFMDVF+V D +G K+ D++VI+ IQQ + + +PS + S
Sbjct: 69 FISSDAGWFMDVFHVRDENGNKLTDQKVINDIQQAIGRSRASSPSQQHSNNNNNNSVFTT 128
Query: 112 -----------------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
P ++HT+IE TG DRPGLFSE+ A LADLHCN+V A W+HN
Sbjct: 129 MTNYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSHNA 188
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR--------GYDDFRKAKTS--LSPP 204
R A V +++D ST AI DP RL++I++ L VLR G + KTS L
Sbjct: 189 RLACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLGGE 248
Query: 205 GIMNR-ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRP 262
G M ERRLHQ+M RD+E E K + V+V + E K Y+++++ KDRP
Sbjct: 249 GQMTTVERRLHQLMLSVRDFETPSSP---KEKKGRKRMVSVESCEQKGYSIVSIECKDRP 305
Query: 263 KLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+L+FD VCTLTDMQYV+FH + + A QE++IRHVDG + + +E+ERV++CLEAAI
Sbjct: 306 RLMFDTVCTLTDMQYVIFHASITSHAGYACQEYFIRHVDGCALDTASEKERVMKCLEAAI 365
Query: 323 ERRASE 328
ERR E
Sbjct: 366 ERRVCE 371
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 223/342 (65%), Gaps = 20/342 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D + LI R+ PPRV IDN+T D T++KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAP---SLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EH
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+ E TG DRPGL SE+ AVL +L CNV A WTH+ +AA+++++ + G IKD KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L+ ++E L NV+ G + K + G + ERRLHQ+M+ + DYE+ R
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RC 245
Query: 234 ED--KSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
D KS + T ++ EK Y++I +RS+DRPKLLFD VC LTD+QYVVFH V+
Sbjct: 246 HDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVS 305
Query: 286 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
+ T AYQE++IR G + SE+ER+R++Q L AAIERR S
Sbjct: 306 SNGTVAYQEYFIRQKGGCILDSESERKRLLQALVAAIERRVS 347
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 222/342 (64%), Gaps = 20/342 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D + LI R+ PPRV IDN+T D T++KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAP---SLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EH
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+ E TG DRPGL SE+ AVL +L CN+ A WTH+ +AA+++++ + G IKD KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L+ ++E L NV+ G + K + G + ERRLHQ+M+ + DYE+ R
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RC 245
Query: 234 ED--KSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
D KS + T ++ EK Y++I +RS+DRPKLLFD VC LTD+QYVVFH V+
Sbjct: 246 HDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVS 305
Query: 286 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
+ T AYQE++IR G + SE ER+R++Q L AAIERR S
Sbjct: 306 SNGTVAYQEYFIRQKGGCILDSECERKRLLQALVAAIERRVS 347
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 173/371 (46%), Positives = 225/371 (60%), Gaps = 45/371 (12%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK------------------------------- 31
DE+ KL+ RMNPPRV +DN + AT++K
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSISWEEFFSQTGE 71
Query: 32 VDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
VDS NK+G LL+V+QVL ++ L IK+AYISSDG WFMDVF+V+D DG K+ D +VID I+
Sbjct: 72 VDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIE 131
Query: 92 QRLETDA-SF-APSLRSSVGVMPTEE-HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
L + SF AP RS T+IE G DRPGL SEV AVL DL CN+V++E
Sbjct: 132 LSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 191
Query: 149 IWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG-----YDDFRKAKTSLSP 203
+WTH+ R AA+VHVTD T AI D RL T+K LL ++LRG D A+ ++
Sbjct: 192 VWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPA 251
Query: 204 P----GIMNRERRLHQIMFDDRDYERVE-KAVGRVEDKSSRPQVTVLNI-EKDYTVITMR 257
P + RRLHQ+M DDR + + RP V V++ E+ YT++ +R
Sbjct: 252 PRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVR 311
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
+DRPKLLFD VCTLTDMQYVVFHG V +EAYQE+YIRH+D P++S ER+R+ +C
Sbjct: 312 CRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRC 371
Query: 318 LEAAIERRASE 328
LEAAI+RR +E
Sbjct: 372 LEAAIQRRNTE 382
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 222/342 (64%), Gaps = 17/342 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L +NPPRVVI+N DATVIK+DSVN+HGILL+V+QVL D++L I KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSD GWFMDVF+V D DG KI D+EV+ +IQ+ + R S+G P +HT+IE
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEG--GEITRVSLGTGP-HQHTAIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLST 179
+G +RPGL SEV + L+ ++CNV +A +WTHN R A ++ V + S+G I+D +L
Sbjct: 130 LSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKD 189
Query: 180 IKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVED 235
IK+ L V+R D R +T+ G+ + ERRLHQ+M D D+ + + GR+ D
Sbjct: 190 IKDRLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGD 249
Query: 236 KS--------SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
++ RP VTV N +E+ Y+V+ + +DR KLLFD VCTLTDM Y++FH + +
Sbjct: 250 ETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILS 309
Query: 287 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
AYQEFYIRH DG + ++ ER+R+I+ L AAI+RR E
Sbjct: 310 EGYFAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPE 351
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/359 (46%), Positives = 227/359 (63%), Gaps = 33/359 (9%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ P RV IDN + D TV+KVDSVNK G+LL+V+QVL D+NL I K
Sbjct: 1747 FDPDFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKG 1806
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------ 112
YISSD GWFMDVF+V D GKK+RD+ VI+YIQQ + T PS ++
Sbjct: 1807 YISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAYTNNIFEAD 1866
Query: 113 -TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
+ EHT+IE +GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I
Sbjct: 1867 HSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPI 1926
Query: 172 KDPKRLSTIKELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMF 218
+DP RL++I++ L VLR + R+ KT L G + N ERRLHQ+M
Sbjct: 1927 EDPHRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLML 1986
Query: 219 DDRDYE----RVEKAVGRVEDK-SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTL 272
RD++ G +K S+ V++ N +K+Y+++ + KDR +L+FD +CTL
Sbjct: 1987 SVRDFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTL 2046
Query: 273 TDMQYVVFHGMVNT---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
DMQYV+FH V++ GR A+QE++IRH DG ++E+E+ERVI+CLEAAIERR SE
Sbjct: 2047 NDMQYVIFHASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSE 2103
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/339 (48%), Positives = 221/339 (65%), Gaps = 33/339 (9%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKV---------DSVNKHGILLQVIQVLNDVNL 53
+EY KL+ RMN PRVVIDN C ++TV+KV DS GILL+ +Q+L D+NL
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQLLTDMNL 67
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
IKKAYISSDG W MDVF+V D +G K+ D+ +I YI++ +ET S G+
Sbjct: 68 WIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL--- 122
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
T++E TGTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I
Sbjct: 123 ---TALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDG 179
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEK 228
D R+ ++ L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK
Sbjct: 180 DSDRVQRVEGQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEK 239
Query: 229 AVGRVEDKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
+ P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T
Sbjct: 240 S----------PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTV 289
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
A+ EFY+RH DG P+SSE ER+R+IQCL+AAIERR
Sbjct: 290 GETAFLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRT 328
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 227 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAI 286
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 287 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 335
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV +L + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 336 LCTADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTD-ANGNLI-DPEIIKSI 393
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 394 REKI-----GIDDL 402
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 226/361 (62%), Gaps = 34/361 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L +NPPRVVI+N ATVIK+DSVN+HGILL+V+QVL D++L I KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---------------- 104
SSD GWFMDVF+V D DG KI D+EV+ +IQ+ LE A+ P +
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSAEGG 132
Query: 105 ---RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
R S+G P +HT+IE +G +RPGL SEV + L+ ++CNV +A +WTHN R A ++
Sbjct: 133 EITRVSLGTGP-HQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIF 191
Query: 162 VTDH-STGYAIKDPKRLSTIKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIM 217
V + S+G I+D +L IK+ L V+R D R +T+ G+ + ERRLHQ+M
Sbjct: 192 VDNACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQMM 251
Query: 218 FDDRDYERVEKAV-GRVEDKS--------SRPQVTVLN-IEKDYTVITMRSKDRPKLLFD 267
D D+ + + GR+ D++ RP VT+ N +E+ Y+V+ + +DR KLLFD
Sbjct: 252 SADEDHCGESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFD 311
Query: 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDM Y++FH + + AYQEFYIRH DG + ++ ER+R+I+ L AAI+RR
Sbjct: 312 TVCTLTDMDYMIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRRFP 371
Query: 328 E 328
E
Sbjct: 372 E 372
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 217/336 (64%), Gaps = 14/336 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y NPPRV I+N +ATV++V S N+HGILL V+QVL D++LVI K+ +
Sbjct: 9 FDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSDM 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-------RLETDASFAPSLRSSVGVMPT 113
SDGGWF+DVF+V+D G K+RD+ V+DYIQ+ + + S A LR S G + T
Sbjct: 69 FSDGGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLRRSSG-LTT 127
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT +E TG DRPGL SE+ AVL + CNV AE+WTHN R A V++ T+ +TG I+
Sbjct: 128 ADHTVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIES 187
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
L IKE L VL+G D + A+ + I + ERRLHQ+M++DR + E+ R
Sbjct: 188 QSLLELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDRLHG--EQDCDR 245
Query: 233 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
+ RP++ + E+ Y++++++ KDRPKLLFDIVCTLTDMQYV+ H ++N+ E
Sbjct: 246 --NSQGRPKIQIKKSERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPGPETT 303
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
QEF+IRH +G + + AE+ + CLEAAI RR +E
Sbjct: 304 QEFFIRHENGCVLDTAAEQHLKV-CLEAAINRRTTE 338
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 218/355 (61%), Gaps = 28/355 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTE 114
+SDGGWFMDVF+V+D G+K+ D++ I +I++ L D++ + SVG+
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIG 124
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+HT+IE G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP
Sbjct: 125 DHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDP 184
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDY 223
RLS I+ L VLRG+ P + +RRLHQ+M D D
Sbjct: 185 CRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDA 244
Query: 224 ERVEKAVGRV---------EDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLT 273
+ + R RP VTV + EKDY+V+ ++ +DR KLLFDIVCTLT
Sbjct: 245 DDDDGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLT 304
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
DM YVV H V++ QE YIR DG + + E RVI+CLEAAI RR SE
Sbjct: 305 DMHYVVSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSE 358
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 217/335 (64%), Gaps = 15/335 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y +PPRV I+N+T + TV++V S ++HGILL V+QVL D++LVI K+ +
Sbjct: 9 FDPDYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLDLVIVKSDM 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEH 116
SD GWF DVF+V+D G K+RD+ V+D+IQ R + S A LR S G + +H
Sbjct: 69 FSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSG-LSVSDH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E TG DRPGL SE+ A+L L CNV AE+WTHN R A V+++TD +TG I+ R
Sbjct: 128 TVVELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPIQTQSR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L IKE L VLRG D A+ + I + ERRLHQ+M+DDR + G+
Sbjct: 188 LELIKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDR------RHAGQDYS 241
Query: 236 KSS--RPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+SS RP++ + E+ Y++++++ KDRPKLLFDIVCTLTDMQYV+ H ++N+ + Q
Sbjct: 242 RSSEDRPKIQIKRNERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADTTQ 301
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
EF+IRH +G + + AE + +I CLEAAI RR ++
Sbjct: 302 EFFIRHENGCTLETPAE-QHLIVCLEAAINRRTTK 335
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 218/351 (62%), Gaps = 23/351 (6%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ +L R+ P RV IDN + D T++KV+S+NK GILL+V++VL D+NL I K+
Sbjct: 12 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 71
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE 115
YISSD GWFM VF+V D G K+ D+ VI+YIQQ + T SL V+ P E
Sbjct: 72 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 131
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE +G DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP
Sbjct: 132 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 191
Query: 176 RLSTIKELLFNVLRG-------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE---- 224
RL+ I+ L VL + + + A + ERRLHQ+M D+E
Sbjct: 192 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSA 251
Query: 225 ----RVEKAVGRVE--DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
E +G E D+ S+ V++ + E+ Y+++++ KDR +L+FD+VCT+TDMQY
Sbjct: 252 PTTSSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQY 311
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
++FHG + A QE++IRH+DG ++SE E+E V++CLEAAIERR E
Sbjct: 312 LIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCE 362
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 218/351 (62%), Gaps = 23/351 (6%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ +L R+ P RV IDN + D T++KV+S+NK GILL+V++VL D+NL I K+
Sbjct: 9 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE 115
YISSD GWFM VF+V D G K+ D+ VI+YIQQ + T SL V+ P E
Sbjct: 69 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE +G DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP
Sbjct: 129 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 188
Query: 176 RLSTIKELLFNVLRG-------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE---- 224
RL+ I+ L VL + + + A + ERRLHQ+M D+E
Sbjct: 189 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSA 248
Query: 225 ----RVEKAVGRVE--DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
E +G E D+ S+ V++ + E+ Y+++++ KDR +L+FD+VCT+TDMQY
Sbjct: 249 PTTSSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQY 308
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
++FHG + A QE++IRH+DG ++SE E+E V++CLEAAIERR E
Sbjct: 309 LIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCE 359
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 209/333 (62%), Gaps = 11/333 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y N PRV ++ +AT++KV+S N+HGILL V+QVL D++L I K+ I
Sbjct: 9 FDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEH 116
D GWFMDVF+V+D +G K DK+ D+I R + A SLR S G + +H
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKALDKQTCDHIMNSLGYRTRREQFSADSLRRSTG-LTVADH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE TG DRPGL SE+ AVL L CNV AE+WTHN RAA++V+ TD STG I + +
Sbjct: 128 TVIELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSK 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L IKE L V++G D A+ + I + ERRLHQ+M+DDR E + R +
Sbjct: 188 LDYIKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANEVPD----RSGN 243
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
RP + + E+ Y+V+++ KDRPKLLFDIVCTLTDMQYV++H ++N +E QEF
Sbjct: 244 MQGRPAIHIKRNERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEF 303
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+IRHV+G + + AE + + CLEAAI RR SE
Sbjct: 304 FIRHVNGCTLDTAAE-QHLKACLEAAISRRTSE 335
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ + ++ +L ++ L D+ VI A I+ G F + +G + D
Sbjct: 260 SVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEFFIRHVNGCTL-DTAAE 318
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+++ LE A S R+S G+ +E DR GL S+V + + +V A
Sbjct: 319 QHLKACLEA----AISRRTSEGL-------RLELCMNDRVGLLSDVTRIFRENGLSVARA 367
Query: 148 EIWTHNDRAAAVVHVTDHS 166
+I T +D+A V +V D S
Sbjct: 368 DITTRHDKAINVFYVVDAS 386
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 218/347 (62%), Gaps = 33/347 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R++PPRV IDN++C D TV+KVDS N+ GILL+++QVL D++L+I K+YI
Sbjct: 9 IDREIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGVMPTE- 114
SSDGGW MDVF+V D GKK+ D+ ++ +IQQ L + + S L S G +
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQ 128
Query: 115 ----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E+T++E + TDR GL SE+ AVL +L +V +A WTHNDR A ++ + D S+
Sbjct: 129 NVAMENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGP 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK---AKTSLSPPGIMNRERRLHQIMFDDRDYE--- 224
I DPKRL ++E L NV+ + + + + + G + ERRLHQ+M+ DRDYE
Sbjct: 189 ISDPKRLGLVEEQLENVVAAHGETGQKNSVRVTTLGTGRTHTERRLHQLMYADRDYESCR 248
Query: 225 ---RVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R +VGR EDK Y V+ +RS+DRPKLLFD VC LTDMQYVVFH
Sbjct: 249 ACDRTHVSVGRCEDKG-------------YLVVNVRSRDRPKLLFDTVCVLTDMQYVVFH 295
Query: 282 GMVNTGRTEAYQEFYIRHVDG-LPISSEAERERVIQCLEAAIERRAS 327
+++ R+ A QE++IRH G L + SE+E E + CL AAIERR S
Sbjct: 296 AAISSKRSMADQEYFIRHCKGSLALPSESETEELTLCLIAAIERRVS 342
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/366 (44%), Positives = 230/366 (62%), Gaps = 39/366 (10%)
Query: 1 MDDEYAKLIRRM-NPP-RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ PP RV IDN++ D TV+KV+S NK G+LL+V+Q+L D+NL+I K+
Sbjct: 9 FDPDFDNLGERIYGPPCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTDMNLIITKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETD---ASFAPSLRSSVGV 110
YISSDGGWFMDVF+V D G K+ DK VI++I+ R E+D AS A + +
Sbjct: 69 YISSDGGWFMDVFHVKDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEANNNSLEPQL 128
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
EHT+IE TGTDRPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +T
Sbjct: 129 ADHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTP 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-------------PPGIMNR--ERRLHQ 215
I DP RL++I++ L V+R D T + G MN ERRLHQ
Sbjct: 189 IDDPSRLASIEDHLSTVIRATADPASNSTHVGHKENETDGFLAGQGKGCMNSNMERRLHQ 248
Query: 216 IMFDDRDYER-------VEKAVGRVE--DKSSRPQVTVLNI----EKDYTVITMRSKDRP 262
+M RD++ + ++E D R + T+++I E+ Y+++T++SKDR
Sbjct: 249 LMLSVRDFDEPFCEPSSLSLLSSKLEYCDHKER-KTTIVSIGNCEERGYSIVTVKSKDRR 307
Query: 263 KLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+L+FD +CTL DMQYV+FH + + +A+QE++IRH+DG +++E E+ERVI+CLEAAI
Sbjct: 308 RLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCLEAAI 367
Query: 323 ERRASE 328
ERR E
Sbjct: 368 ERRVCE 373
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 212/328 (64%), Gaps = 17/328 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ + + ERRLHQ+M DRD E + S P
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPA 229
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V+V + E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH
Sbjct: 230 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHA 289
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER RV QCL+ AIERR+ E
Sbjct: 290 DGSPISSEAERHRVSQCLQDAIERRSLE 317
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ I + G F + DG I +
Sbjct: 241 SVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPISSEAER 300
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ Q L+ DA SL E +E DRP L S+V + V A
Sbjct: 301 HRVSQCLQ-DAIERRSL----------EGVRLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIK 172
E+ T D A+ V +VTD + G+A++
Sbjct: 350 EVSTKGDMASNVFYVTD-AAGHAVE 373
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 212/328 (64%), Gaps = 17/328 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ + + ERRLHQ+M DRD E + S P
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPA 229
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V+V + E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH
Sbjct: 230 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHA 289
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER RV QCL+ AIERR+ E
Sbjct: 290 DGSPISSEAERHRVSQCLQDAIERRSLE 317
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ I + G F + DG I +
Sbjct: 241 SVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPISSEAER 300
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ Q L+ A RS GV +E DRP L S+V + V A
Sbjct: 301 HRVSQCLQD----AIERRSLEGV-------RLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIK 172
E+ T D A+ V +VTD + G+A++
Sbjct: 350 EVSTKGDMASNVFYVTD-AAGHAVE 373
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 212/328 (64%), Gaps = 17/328 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ + + ERRLHQ+M DRD E + S P
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPA 229
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V+V + E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH
Sbjct: 230 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHA 289
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER RV QCL+ AIERR+ E
Sbjct: 290 DGSPISSEAERHRVSQCLQYAIERRSLE 317
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + +V+ V ++ +L V+ L D++ V+ I + G F +
Sbjct: 228 PAVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIR 287
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + Q L+ +A RS GV +E DRP L S+V
Sbjct: 288 HADGSPISSEAERHRVSQCLQ----YAIERRSLEGV-------RLELCTPDRPALLSDVT 336
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ V AE+ T D A+ V +VTD + G+A++
Sbjct: 337 RTFRENGLLVAQAEVSTKGDMASNVFYVTD-AAGHAVE 373
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 225/345 (65%), Gaps = 20/345 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E LI R++PPRV I+N++C D TV+KVDS N+ GILL+++QVL D++L+I K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--------ETDASFAPSLRSSVGVMP 112
SSDGGW MDVF+V D GKK+ D+ ++ +IQQ + +T+ + ++ +P
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVP 128
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E+T++E + TDRPGL SE+ AVL +L C+V +A WTHNDR A ++ + D S+ I
Sbjct: 129 -KENTALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPIS 187
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
DP+RL ++E L NV+ + + + K T+L G + ERRLHQ+M+ DRDYE
Sbjct: 188 DPERLGLVEEQLENVVAAHGETGQKKSVRVTTLG-TGRTHTERRLHQLMYADRDYESCRA 246
Query: 229 AVGRVEDKSSR----PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
G + + V+V E K Y V+ +RS+DRPKLLFD VC LTDMQYVVFH
Sbjct: 247 CDGDSSGEHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAA 306
Query: 284 VNTGRTEAYQEFYIRHVDG-LPISSEAERERVIQCLEAAIERRAS 327
+++ R+ A+QE++IR+ G L + SE E+E + CL AAIERR S
Sbjct: 307 ISSKRSMAHQEYFIRNCKGSLALPSEREKEELTLCLIAAIERRVS 351
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 230/370 (62%), Gaps = 43/370 (11%)
Query: 1 MDDEYAKLIRRM-NPP-RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ PP RV IDN++ D TV+KV+S NK G+LL+V+Q+L D+NL+I K+
Sbjct: 9 FDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTDMNLIITKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPT 113
YISSDGGWFMDVF+V D G K+ DK VI++I+ R E+D A ++
Sbjct: 69 YISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAHNNPNNNSL 128
Query: 114 E-------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
E EHT+IE TGTDRPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +
Sbjct: 129 ESPLSDHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDN 188
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-------------PPGIMNR--ER 211
T I DP RL++I++ L V+R D T + G MN ER
Sbjct: 189 THTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKGCMNSNVER 248
Query: 212 RLHQIMFDDRDYER-------VEKAVGRVE--DKSSRPQVTVLNI----EKDYTVITMRS 258
RLHQ+M RD++ + ++E D+ R + T+++I E+ Y+++T++S
Sbjct: 249 RLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDQKER-KTTIVSIGNCEERGYSIVTVKS 307
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
KDR +L+FD +CTL DMQYV+FH + + +A+QE++IRH+DG +++E E+ERVI+CL
Sbjct: 308 KDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCL 367
Query: 319 EAAIERRASE 328
EAAIERR E
Sbjct: 368 EAAIERRVCE 377
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 215/334 (64%), Gaps = 8/334 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY + ++PP+V+IDN++ +AT++KV S NKHG LL+V+Q L D++L I KAYI
Sbjct: 10 FDPEYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISKAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----QRLETDASFAPSLRSSVGVMPTEE 115
+SDGGWFMDVF+V D G KIRD+++I IQ Q+ + A F SVG E
Sbjct: 70 TSDGGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISE 129
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE TGTDRPGL SEV AVLA++ C V AE+WTHN R A V++VTD T I++ +
Sbjct: 130 HTAIELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIENVR 189
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L I E L +++G DD + A+ S+ + ERRLHQ+M D D +
Sbjct: 190 KLERILEKLNPIMQGCDDEKVAR-SVVAESFTHVERRLHQLMLADHDSDPSVSQSQISSR 248
Query: 236 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
K P +TV + EK+Y+V+ ++ DRPKLLFD VCTLTD++YVV H + + A QE
Sbjct: 249 KQKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQE 308
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
++IR +DG + A + +V +CLEAAIERR+SE
Sbjct: 309 YHIRSMDGRTLDDPA-KAKVKRCLEAAIERRSSE 341
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 10 RRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMD 69
R+ P + ++ + + +V+KV +++ +L + L D+ V+ A I G + +
Sbjct: 248 RKQKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQ 307
Query: 70 VFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
+++ DG+ + D +++ LE A RSS G+ + TDRPGL
Sbjct: 308 EYHIRSMDGRTL-DDPAKAKVKRCLEA----AIERRSSEGL-------RLYLCTTDRPGL 355
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+EV + +V AE+ T D+A +VTD
Sbjct: 356 LTEVTRTFRENGLSVTRAEVSTQGDKAVNTFYVTD 390
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 219/339 (64%), Gaps = 14/339 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN+T ++ TV+KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTE 114
+SDGGWFMDVF+V++ G+K+ D + I YI++ L ++ + + SVG+
Sbjct: 65 TSDGGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNLPSAKKGGGSPGRSVGMHSIG 124
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-D 173
+HT+IE G DR GL SE+ AVLA+L CNV+ AE+WTH R A VV+V D +TG I D
Sbjct: 125 DHTAIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPIDVD 184
Query: 174 PKRLSTIKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
+R+++I+ L NVLRG+ +D A T + G + +RRLHQ+M D + +
Sbjct: 185 TRRMTSIEHRLRNVLRGHGGDDEDGTGAHTEFA-VGSTHVDRRLHQLMNADMELVDAQGE 243
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
V D V EKDY+V+ +R +DR KLLFDIVCTLTDMQYVV H V++
Sbjct: 244 GEEVADDGMSVTVGYCK-EKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGL 302
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
QE +IR DG + + E ++V++CL+AAI RR SE
Sbjct: 303 YGVQELFIRRKDGRTLLKD-EEDKVVKCLQAAISRRVSE 340
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI-RDK 84
D +V+ V ++ +L ++ L D+ V+ A +SSDG + + + DG+ + +D+
Sbjct: 263 DYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGLYGVQELFIRRKDGRTLLKDE 322
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
E D + + L+ A S R S G ++E G DR GL SEV VL + V
Sbjct: 323 E--DKVVKCLQA----AISRRVSEGF-------TLEVCGRDRVGLLSEVTRVLREHGLTV 369
Query: 145 VNAEIWTHNDRAAAVVHVTDHS 166
A++ T ++A V +V D S
Sbjct: 370 TRADVATVGEQAMNVFYVRDAS 391
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/330 (47%), Positives = 204/330 (61%), Gaps = 20/330 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 186
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG R A+T L+ P N +RRLHQ++ +D G + + + P
Sbjct: 187 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMT 234
Query: 243 TVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 235 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 294
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEV 329
DG PISSEAER+ VI+CL+AAIERRASEV
Sbjct: 295 SDGRPISSEAERQHVIRCLQAAIERRASEV 324
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/329 (47%), Positives = 203/329 (61%), Gaps = 20/329 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 186
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG R A+T L+ P N +RRLHQ++ +D G + + + P
Sbjct: 187 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMT 234
Query: 243 TVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 235 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 294
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER+ VI+CL+AAIERRASE
Sbjct: 295 SDGRPISSEAERQHVIRCLQAAIERRASE 323
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 247 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 306
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 307 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 351
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T +D A V HVTD + A DPK TI E++
Sbjct: 352 VTHAEITTRDDMAMNVFHVTDVAGRPA--DPK---TIDEVI 387
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 162/329 (49%), Positives = 211/329 (64%), Gaps = 16/329 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGT--WNEPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH--STGYAIKDPKRLSTI 180
G DR GL SEV AVLAD+ C+VV+A WTH R A VV + ++G + D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARI 177
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
L ++LRG + A ++ G+ + +R LHQ+M D D A + P
Sbjct: 178 LARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLDRAPSFPA------PALSP 231
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V + E+ Y+V+T+ +DRPKLLFD+VCTL DM YVVFHG V+T A QEFYIR
Sbjct: 232 AVSVQSWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRR 291
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
DG PI SEAERER+ QCL+AAIERR+ E
Sbjct: 292 ADGSPIRSEAERERLNQCLQAAIERRSLE 320
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L+D++ V+ + + G F + DG IR +
Sbjct: 244 SVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRRADGSPIRSEAER 303
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ + Q L+ A RS GV +E DRPGL SEV + VV A
Sbjct: 304 ERLNQCLQA----AIERRSLEGV-------RLELCTPDRPGLLSEVTRTFRENGLLVVQA 352
Query: 148 EIWTHNDRAAAVVHVTDHSTGYA 170
E+ T D A+ V +VTD + A
Sbjct: 353 EVSTKGDLASNVFYVTDAAGKAA 375
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 25/350 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L R++P RV IDNNTC D TV+KVDS NK+GILL+++QVL D++L+I K+YI
Sbjct: 9 VDREIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ--------------QRLETDASFAPSLRS 106
SSDGGWFMDVF+V D GKK+ D+ ++ I+ + L+ A ++ S S
Sbjct: 69 SSDGGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYS 128
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + E+T++E +G DRPGL SE+ AVL ++ CNV +A WTHN R A +++V + S
Sbjct: 129 KQIV--STENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEAS 186
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY---DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
I+DP+RL+ +KE L +V+ + + + G + ERRLHQ+M+ DRDY
Sbjct: 187 KPGPIRDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGRTHTERRLHQLMYADRDY 246
Query: 224 ERVEKAVG-RVEDKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
E G D T ++I ++ Y V+ + +DRPKL FD VC L DMQYV
Sbjct: 247 EGCRACHGDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYV 306
Query: 279 VFHGMVNTGRTEAYQEFYIRH-VDGLPISSEAERERVIQCLEAAIERRAS 327
VFH +++ ++ A QE+YIRH +GL + +++ERE++I C+ AAIERR S
Sbjct: 307 VFHAAISSKKSIADQEYYIRHKWNGLALRTQSEREKLILCIIAAIERRVS 356
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 215/335 (64%), Gaps = 14/335 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ RMNPPRV +DN + AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 15 DEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEEHTSIE 120
DG WFMDVF+V+D +G K+ D +VID I+Q L + SF A + + T+IE
Sbjct: 75 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETETAAAAMAQATAIE 134
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK---DPKRL 177
G DRPGL SEV AVL +L CN+ ++E+WTH+ R AA+V VTD TG I+ DP+RL
Sbjct: 135 LVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDDDPERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD-RDYERVEKAVGRVEDK 236
T+K LL +VLRG +A P G ++ RRLHQ+M D R A E+
Sbjct: 195 DTVKRLLRHVLRG-----RAAVQARPGGALHAHRRLHQMMSADLRSRAAAAGAGDEEEED 249
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
V V E+ YTV+ +R +DR KLLFD VCTLTDMQYVVFHG V +EAYQEF
Sbjct: 250 CEGVVVGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEF 309
Query: 296 YIRHVDGLPISSEAERERVI--QCLEAAIERRASE 328
YIRH+D +S + +R +CL+AAI+RR +E
Sbjct: 310 YIRHLDDGAAASASAADRARLRRCLQAAIQRRNTE 344
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 213/348 (61%), Gaps = 28/348 (8%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF 67
L++ + RV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI+SDGGWF
Sbjct: 141 LLKEESTERVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 121
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 230
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 231 GRV---------EDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R RP VTV + EKDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
H V++ QE YIR DG + + E RVI+CLEAAI RR SE
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSE 487
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 202/333 (60%), Gaps = 22/333 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL+ + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKE-VIDYIQQRLETDA---SFAPSLRSSVGVMPTEEHTSI 119
G WFMDVF+V D G+K+ D + ++ ++ L DA P+ G P T +
Sbjct: 70 GRWFMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMP-TLL 128
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+
Sbjct: 129 ELVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRR 188
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
++ L +VLRG A+ +N +RRLHQ++ +D G E ++ +
Sbjct: 189 VESRLRHVLRG--GALGARMVREDAAAVNMDRRLHQLLNED----------GEAECRADQ 236
Query: 240 PQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEF
Sbjct: 237 ADATAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEF 296
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
YIR +DG PISS AER RVIQCL+AAIERRASE
Sbjct: 297 YIRRLDGRPISSAAERRRVIQCLQAAIERRASE 329
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 253 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAER 312
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E TDR GL + V V + +
Sbjct: 313 RRVIQCLQAAIERRAS---------------EGVRLELRITDRRGLLAYVTRVFRENSLS 357
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T D+A V HVTD + A DPK TI E++
Sbjct: 358 VTHAEITTRGDKAMNVFHVTDVAGRPA--DPK---TIDEVI 393
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/342 (47%), Positives = 223/342 (65%), Gaps = 21/342 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+R MNPPRV IDN T I+VDSVN HG LL ++QV+ D+NLV++KAY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR-SSVGVMPTE------E 115
DG WFMDVF V D DG+K+ D+ ++YIQ LE+D + R +S ++P+E +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DP 174
++SIE TGTDRPGL SEVCAVL+D+ C VV+A++WT N R AAVV V D +TG AI DP
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 175 KRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGI--MNRERRLHQIMFDDRDYERVEKAV 230
R++ I L ++L R + A + P + M++ERRLHQ+M D + +E
Sbjct: 188 ARVAEISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGDG 247
Query: 231 GRVEDKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
++ TV+ + ++ YT + +R +D PKLLFD VCT+TD QYVV+HG V+T
Sbjct: 248 AYLQPAPGTTPATVVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNVST 307
Query: 287 ---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR 325
G T AYQE+Y+R+ GL ++E ER + + LEAA+ERR
Sbjct: 308 EPDGVT-AYQEYYVRNKAGLA-ATEPERLLLKRQLEAAVERR 347
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 213/348 (61%), Gaps = 28/348 (8%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF 67
L++ + RV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI+SDGGWF
Sbjct: 141 LLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 121
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 230
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 231 GRV---------EDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R RP VTV + EKDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
H V++ QE YIR DG + + E RVI+CLEAAI RR SE
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSE 487
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 204/333 (61%), Gaps = 11/333 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y NPP+V ++ +ATV+KV S N+HGILL V+QVL D++L I K+ I
Sbjct: 9 FDPDYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET----DASFAPSLRSSVGVMPTEEH 116
D GWFMDVF+V+D +G K DK D+I + T A+ LR S G + EH
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRSTG-LTCSEH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE TG DRPGL SE+ AVL L CNV AE+WTHN R A++++ D +TG I +
Sbjct: 128 TVIELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSK 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ L V++G D A+ + I + ERRLHQ+M+DDR E V G +
Sbjct: 188 LDHIRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRVNE-VPHVSG---N 243
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
RP + + E+ Y+V++++ KDR KLLFDIVCTLTDMQYV++H ++N+ E QEF
Sbjct: 244 PQQRPVIQIKRNERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEF 303
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+IRHV+G + + A+ E + CLEAAI RR SE
Sbjct: 304 FIRHVNGCTLDT-ADAEHLKVCLEAAINRRTSE 335
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ + ++ +L ++ L D+ VI A I+S G F + +G + D
Sbjct: 260 SVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEFFIRHVNGCTL-DTADA 318
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
++++ LE A + R+S G+ +E +DR GL S+V + + +V A
Sbjct: 319 EHLKVCLEA----AINRRTSEGL-------RLELCMSDRIGLLSDVTRLFRENGLSVARA 367
Query: 148 EIWTHNDRAAAVVHVTDHS 166
+I T +D+A V +V D S
Sbjct: 368 DITTRDDKAVNVFYVVDAS 386
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 208/335 (62%), Gaps = 21/335 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN C AT+++V S K+G+LL+ + L+D + ++K YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKE-VIDYIQQRLETDASFAPSLRSSVGV----MPTEEHTS 118
G WFMDVF+V D G+K+ D + ++ ++ L A+ A +L G E +
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E G DRPGL SEV AVL DL C++V+A+ WTH R AA+V V D TG I D R
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 179 TIKELLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+ L VLRG R A+T L + N +RRLHQ++ +DR+ A GR +
Sbjct: 190 RIESRLRYVLRG--GARGARTILVDAAAVGNLDRRLHQLLNEDRE------ADGR--PAA 239
Query: 238 SRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
RP T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A Q
Sbjct: 240 DRPTTTAVAVQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQ 299
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
EFYIR +DG PISS AER+RVIQ L+AAIERRASE
Sbjct: 300 EFYIRRLDGQPISSAAERQRVIQRLQAAIERRASE 334
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 258 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGQPISSAAER 317
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ QRL+ A R+S GV +E + DR GL + V V + +V +A
Sbjct: 318 QRVIQRLQA----AIERRASEGV-------RLELSIKDRRGLLAYVTRVFRENSLSVTHA 366
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
EI T D+A V HVTD + A DPK + +
Sbjct: 367 EITTRGDKALNVFHVTDVAGRPA--DPKAIDEV 397
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 194/330 (58%), Gaps = 14/330 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL + L+D + ++K YISSB
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFT 122
G WFMDVF+V+D G K+ D + RLE+ S ++ E
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELV 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG A+ + +N +RRLHQ++ +D + R E ++ P
Sbjct: 187 RLRHVLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAPTP 241
Query: 243 TVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 242 TAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIR 301
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
+D PISS ER RVIQCLEAAIERRASE
Sbjct: 302 RLDERPISSATERRRVIQCLEAAIERRASE 331
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
P V + + +V+ V ++ +L V+ L D++ V+ +D F
Sbjct: 240 TPTAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFY 299
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ D + I + Q LE A R+S GV +E TDR GL +
Sbjct: 300 IRRLDERPISSATERRRVIQCLEA----AIERRASEGV-------RLELRITDRRGLLAY 348
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V V + +V +AEI T D A V HVTD + A DPK TI E++
Sbjct: 349 VTRVFRENSLSVTHAEITTRGDMAMNVFHVTDVAGRPA--DPK---TIDEVI 395
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 200/332 (60%), Gaps = 26/332 (7%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL+ + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYI---QQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
G WFMDVF+V D G+K+ D + + + L DA + ++ PT +E
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTPT----LLE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+ +
Sbjct: 126 LVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRV 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
+ L +VLRG A+ + +N +RRLHQ++ +D + E S
Sbjct: 186 ESRLRHVLRG--GALGARMVRADAAAVNMDRRLHQLLNEDGEAE------------SRAD 231
Query: 241 QVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
Q T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFY
Sbjct: 232 QATAVAVQDWGERGYSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFY 291
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASE 328
IR +DG PISS AER RVIQCL+AAIERRASE
Sbjct: 292 IRRLDGRPISSAAERRRVIQCLQAAIERRASE 323
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 247 SVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAER 306
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E TDR GL + V V + +
Sbjct: 307 RRVIQCLQAAIERRAS---------------EGVRLELRITDRRGLLAYVTRVFRENSLS 351
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T D A V HVTD + A DPK TI E++
Sbjct: 352 VTHAEITTRGDMAMNVFHVTDVAGRPA--DPK---TIDEVI 387
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/327 (47%), Positives = 192/327 (58%), Gaps = 12/327 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T A + P E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G R GL SEV AVLAD+ C V +A W H R A V H+ R+S I
Sbjct: 118 GPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDP-ADGDGDGRVSRILA 176
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ G+ + +RRLHQ+M D R V +
Sbjct: 177 RLSHLLRGDGVVAPGAVAAVPASGVAHADRRLHQLM--SADLHRAAPVPVPVPALAPAVS 234
Query: 242 VTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
V E+ Y+V+T++ DRPKLLFD+ CTL DM YVVFHG V+T A QEFYIR D
Sbjct: 235 VQSWA-ERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRAD 293
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PI SEAERE + L+AAIERR+ E
Sbjct: 294 GSPIRSEAEREMLTHHLQAAIERRSLE 320
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V L+D++ V+ + + G F + DG IR +
Sbjct: 244 SVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRADGSPIRSEAER 303
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ + L+ A RS GV +E DR GL SEV + V A
Sbjct: 304 EMLTHHLQA----AIERRSLEGV-------RLELCAPDRAGLLSEVTRTFRENGLLVAQA 352
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
E+ T D+A V +VTD A K P R
Sbjct: 353 EVSTKGDQACNVFYVTD----AAGKAPDR 377
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 194/330 (58%), Gaps = 14/330 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFT 122
G WFMDVF+V+D G K+ D + RLE+ S ++ E
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELV 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG A+ + +N +RRLHQ++ +D + R E ++ P
Sbjct: 187 RLRHVLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAPTP 241
Query: 243 TVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 242 TAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIR 301
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
+D PISS ER RVIQCLEAAIERRASE
Sbjct: 302 RLDERPISSATERRRVIQCLEAAIERRASE 331
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/327 (46%), Positives = 200/327 (61%), Gaps = 22/327 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNE--PARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLADL C VV+A WTH R A V + D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARILA 171
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +++RG + A ++ + + +RRLHQ+M D + V +S
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHNNSATPYPAAAVSVQSW---- 227
Query: 243 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVD 301
E+ Y+V+T++ +DRPKLLFD+VC L + YVVFHG V+T + A QEFYI D
Sbjct: 228 ----AERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSAD 283
Query: 302 GLPISSEAERERVIQCLEAAIERRASE 328
G PI SEAERER+ QCL+AAI+RR+ E
Sbjct: 284 GSPIRSEAERERLAQCLQAAIDRRSLE 310
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEV 86
+V+ V ++ +L V+ L+ ++ V+ + + G F + DG IR +
Sbjct: 233 SVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSADGSPIRSEAE 292
Query: 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
+ + Q L+ A RS GV +E DRPGL SEV + V +
Sbjct: 293 RERLAQCLQA----AIDRRSLEGV-------RLELCTPDRPGLLSEVTRTFRENGLLVAH 341
Query: 147 AEIWTHNDRAAAVVHVTD 164
AE+ T A+ V +VTD
Sbjct: 342 AEVSTKGGLASNVFYVTD 359
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 211/343 (61%), Gaps = 17/343 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E LI R++PPRV IDN++ D TV+K+DS N+HGILL+++QVL D++ VI K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE----- 115
SSDGGW MDVF+V D DG K+ D+ ++ YIQQ L S + + S + + E
Sbjct: 69 SSDGGWLMDVFHVTDHDGNKLTDRGLVHYIQQTLCEARSNSKEISSDIELTSCNEPPRLV 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +IE T ++ GLFSE+ AVL L NV +A WTHNDR A ++H+ D I + +
Sbjct: 129 NLAIELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAE 187
Query: 176 RLSTIKELLFNVLR-----GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER----- 225
RL+ ++ L NV++ G ++ + + G + ERRLHQ+M+ D DYER
Sbjct: 188 RLAQVQPELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYERCRACH 247
Query: 226 VEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
V G + QVTV EK Y V+ +RS+DRPKLLFD VC LTDMQY VFH V
Sbjct: 248 VGDRNGEKKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAAV 307
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
++ + A QE+++R + +E+E++++ CL AAIERR S
Sbjct: 308 SSNGSMADQEYFVRPKGSSNLDNESEKQKLSLCLIAAIERRVS 350
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 218/358 (60%), Gaps = 30/358 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTE 114
SSDGGW MDVF+V D G+K+ D + ++IQ+ L +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGG 128
Query: 115 EHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
S +EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VTD + G A
Sbjct: 129 PDVSGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGGAA 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYER- 225
+ P R + I+ L+ V+ ++ + +S P G ++ ERRLHQ+M DDRDYE
Sbjct: 189 LL-PGRCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMHDDRDYESG 247
Query: 226 -----VEKAVGRVEDKSSRPQVTVLNI---------EKDYTVITMRSKDRPKLLFDIVCT 271
V++ + V +K++ + + E+ Y V+ M S+DRP+LLFD VC
Sbjct: 248 PAPTPVDEDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTVCA 307
Query: 272 LTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
LTDMQYVVFH V + A QE+YIRH DG + + AER++V +CL AA+ERRA+ V
Sbjct: 308 LTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDNSAERQKVSRCLVAAVERRATHV 365
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 209/349 (59%), Gaps = 23/349 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R+NPPRV +DN++ + T+IKVDS NK+GILL ++QVL D++LVI K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE---- 114
SSDG WFMDVF+V D G K+ D+ +I YIQQ + + ++S++ +
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 PKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
P R + +K+ L V+ + R + +P G + ERRLH++M+ + DYE
Sbjct: 190 PIRKAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDYEN 249
Query: 226 V-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+V
Sbjct: 250 CFDCDCFGDRCDALWRGRCERIHVTI-EACNGYSMVNVKCRDRPKLLFDTVCALKELQFV 308
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VFH + + A QE++IR +G + +E +RER+ CL AAI RRAS
Sbjct: 309 VFHAVAGAKGSTAEQEYFIRKKNGCTLETEVQRERLRHCLVAAISRRAS 357
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 209/350 (59%), Gaps = 23/350 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R+NPPRV +DN++ + T+IKVDS NK+GILL ++QVL D++LVI K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE---- 114
SSDG WFMDVF+V D G K+ D+ +I YIQQ + + ++S++ +
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 PKRLSTIKELLFNVLRGY--------DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
P R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 190 PIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYEN 249
Query: 226 V-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+V
Sbjct: 250 CFDCDCFGDRCDALWRGRCERIHVTI-EACNGYSMVNVKCRDRPKLLFDTVCALKELQFV 308
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
VFH + + A QE++IR +G + +E +RER+ CL AAI RRAS+
Sbjct: 309 VFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQ 358
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 188/326 (57%), Gaps = 28/326 (8%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+R MNPPRVV+DN C +ATVI+VDSV+ HG LL V+QV+ D+ LVI+KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KELLFNVLRGYDDF---------------RKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L N+LRG S P G +E + + D D R
Sbjct: 195 STRLGNLLRGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHV---DGDPVR 251
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEK---DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
E RV Q IE+ D + +R+ DR LL D+ + +
Sbjct: 252 SEAERQRV------VQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRA 305
Query: 283 MVNTGRTEAYQEFYIRHVDGLPISSE 308
+++ R EA FY+ G P+ ++
Sbjct: 306 EISSERGEAVDTFYLSDPQGHPVEAK 331
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
+ + LLFD VCT+TDM YV+ HG V++ R AYQE+YIRHVDG P+ SEAER+RV+QC
Sbjct: 203 RGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQC 262
Query: 318 LEAAIERRASE 328
LEAAIERR ++
Sbjct: 263 LEAAIERRTAD 273
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 202/334 (60%), Gaps = 34/334 (10%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L + R + E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSL---GXWNEPARPAA----LEGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLADL C VV+A WTH R A V + G D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFL----RGEGXAD--RVARILA 171
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP-- 240
L +++RG + A ++ + + +RRLH++M D + S+ P
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAAD-------------HNNSATPYP 218
Query: 241 ----QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQE 294
V+V + E+ Y+V+T++ +DRPKLLFD+VC L + YVVFHG V+T + QE
Sbjct: 219 AAAAAVSVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQE 278
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FYIR DG PI SEAERER+ QCL+AAI+RR+ E
Sbjct: 279 FYIRSADGSPIRSEAERERLAQCLQAAIDRRSLE 312
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEV 86
+V+ V ++ +L V+ L+ ++ V+ + + G F + DG IR +
Sbjct: 235 SVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRSADGSPIRSEAE 294
Query: 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
+ + Q L+ A RS GV +E DRPGL SEV + V +
Sbjct: 295 RERLAQCLQA----AIDRRSLEGV-------RLELCTPDRPGLLSEVTRTFRENGLLVAH 343
Query: 147 AEIWTHNDRAAAVVHVTD 164
AE+ T A+ V +VTD
Sbjct: 344 AEVSTKGGLASNVFYVTD 361
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 206/359 (57%), Gaps = 34/359 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ ++ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMP-- 112
SSDGGW MDVF+V D G K+ D + +IQQ L + + +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGCKLTDPSLPGFIQQALLPFQRSGSGPSPKFTTCLGNVVGPGG 128
Query: 113 --TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT A
Sbjct: 129 PDVSDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYVTATGADSA 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYE-- 224
P R + I+ L+ V+ ++ + +S P G ++ ERR+HQ+M DD DYE
Sbjct: 189 ALHPSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMHDDGDYESS 248
Query: 225 ---------------RVEKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDI 268
R A +R VT+ N E K Y ++ M S+DRPKLLFD
Sbjct: 249 PAPTPVDEEHFCMGDRAATAARSAHRTETR--VTIDNWEEKGYAIVKMTSRDRPKLLFDT 306
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VC LTDM YVVFH V A QE+YIRH DG + S AER++V +CL AA+ERRAS
Sbjct: 307 VCALTDMHYVVFHATVGAQGPLAIQEYYIRHKDGRTVDSYAERQKVSRCLVAAVERRAS 365
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 211/370 (57%), Gaps = 45/370 (12%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ ++ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP- 112
SSDGGW MDVF+V D G+K+ D + +IQQ L +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTCLGNVVGPG 128
Query: 113 ---TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT T
Sbjct: 129 GPDVSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYVT--MTAA 186
Query: 170 AIKDP---KRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRD 222
A P R + I+ L+ V+ + A+ S PG ++ ERRLHQ+M DDRD
Sbjct: 187 AEAQPPHQSRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQLMHDDRD 246
Query: 223 YERVEK---------AVGRVEDK---------------SSRPQVTVLNI-EKDYTVITMR 257
YE ++G V ++ +VT+ N E+ Y V+ M
Sbjct: 247 YESGPAPTPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERGYAVVKMT 306
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
S+DRPKLLFD VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +C
Sbjct: 307 SRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRC 366
Query: 318 LEAAIERRAS 327
L AA+ERRAS
Sbjct: 367 LVAAVERRAS 376
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RV IDN V+K+ S ++ +L + L D+ V+ A + S G + + +
Sbjct: 289 RVTIDNWEERGYAVVKMTSRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRH 348
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG+ + + +Q++ A R+S GV +E DR GL S+
Sbjct: 349 KDGRTVDS----NAERQKVSRCLVAAVERRASHGV-------RVEVRAADRSGLLSDFTR 397
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+L + +++ E+ D A ++ S G
Sbjct: 398 ILREHGLSLLRVELKRQKDEAVGTFYLVTDSGG 430
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 211/359 (58%), Gaps = 39/359 (10%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R+ P VV+DN T D T++KVDSVN+ G+LL ++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTE 114
SDGGW MDVF+V D G+K+ D + ++IQ+ L T +P + +G V P
Sbjct: 69 CSDGGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAG 128
Query: 115 EHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
S +EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VT
Sbjct: 129 PDVSGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVTP------ 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYER- 225
P R + ++ L+ V+ ++ + T +S P G ++ ERRLHQ+M DDRDYE
Sbjct: 183 -PLPSRWARVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYESG 241
Query: 226 -----VEKAVGRVEDKSSRPQVTVLNI------------EKDYTVITMRSKDRPKLLFDI 268
V++ + V DK++ T E+ Y V+ M S+DRP LLFD
Sbjct: 242 PAPTPVDEGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVKMTSRDRPSLLFDT 301
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRA+
Sbjct: 302 VCALTDMQYVVFHATVGSQGVLAIQEYYIRHKDGGTVDSSAERQKVSRCLVAAVERRAT 360
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 211/362 (58%), Gaps = 35/362 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV--------G 109
SSDGGW MDVF+V D G+K+ D + ++IQ+ L + PS R + G
Sbjct: 69 SSDGGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPG 128
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD----H 165
+ ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V++VT
Sbjct: 129 GPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGA 188
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDR 221
+ A P R I+ L+ V+ + + S+S P G ++ ERRLHQ+M DDR
Sbjct: 189 AAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHDDR 248
Query: 222 DYERVEKAVG------RVEDKS------SRPQVTVLNI----EKDYTVITMRSKDRPKLL 265
DYE A + DK+ +R T ++I E+ Y V+ M S+DRPKLL
Sbjct: 249 DYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPKLL 308
Query: 266 FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR 325
FD VC LTDM YVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERR
Sbjct: 309 FDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVERR 368
Query: 326 AS 327
AS
Sbjct: 369 AS 370
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 205/346 (59%), Gaps = 34/346 (9%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKV-------DSVNKHGILLQVIQVLNDVNLVI 55
+EY KL+ RM+ P+VVIDN C AT+++V DS G+LL+ +QVL D++L I
Sbjct: 5 NEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVLADLDLSI 64
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT-- 113
KAYISSDG WFMDVF+V D G+K+ D VI YIQQ L + VG+ P+
Sbjct: 65 NKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQSLA-------AWNGPVGIDPSAS 117
Query: 114 ----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E T +E TG DR GL SEV AVLAD+ C VV+A W+H R A +V++ D
Sbjct: 118 AAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADVAA 177
Query: 170 AIKDPKRLSTIKELLFNVLRG---YDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYE 224
A + I+ L +LRG + F + + P + + +RRLHQ+M E
Sbjct: 178 AGA-----ARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLMHAAAARE 232
Query: 225 RVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
++ E + P V+V + E+ Y+V+T++ DRPKLL+D+VCTLTDM YVVFHG
Sbjct: 233 HDDRRASPSEADT--PSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGT 290
Query: 284 VNTGRT-EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
V+T + A QEFYIR DG PISS+AE RV CL+ AIERR+ E
Sbjct: 291 VDTSASGGARQEFYIRSADGSPISSDAEMRRVSLCLQDAIERRSFE 336
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 10 RRMNP-----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSD 63
RR +P P V +++ +V+ V ++ +L V+ L D++ V+ + +S
Sbjct: 236 RRASPSEADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVDTSA 295
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G F + DG I D +R+ A RS GV +E
Sbjct: 296 SGGARQEFYIRSADGSPISS----DAEMRRVSLCLQDAIERRSFEGV-------RLELCT 344
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
DRPGL S+V + V AE+ T D A+ V +VT + G A+
Sbjct: 345 PDRPGLLSDVTRTFRENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAV 392
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 215/365 (58%), Gaps = 38/365 (10%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVIYKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMPT 113
SSDGGW MDVF+V D G+K+ D + ++IQ+ L + P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVGPG 128
Query: 114 EEHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
S +EFT DR GL S + +VL D C+V + + WTHN RAA V++VT +
Sbjct: 129 GPDVSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYVTTTAAAT 188
Query: 170 AIKD-------PKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMF 218
P R + I+ L+ V+ ++ + +S P G ++ ERRLHQ+M
Sbjct: 189 TADGAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTERRLHQLMH 248
Query: 219 DDRDYER------VEKAVGRVEDKSS------RPQVTVLNI----EKDYTVITMRSKDRP 262
DDRDYE V++ + + +K++ R VT ++I E+ Y V+ M S+DRP
Sbjct: 249 DDRDYESGPAPTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEERGYAVVKMTSRDRP 308
Query: 263 KLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+LLFD VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +CL AA+
Sbjct: 309 RLLFDTVCALTDMQYVVFHATVGSQGALAIQEYYIRHKDGRTVDSSAERQKVSRCLVAAV 368
Query: 323 ERRAS 327
ERRA+
Sbjct: 369 ERRAT 373
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 24/215 (11%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
A+ RR RV ID+ V+K+ S ++ +L + L D+ V+ A + S G
Sbjct: 276 ARTARRGAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTVCALTDMQYVVFHATVGSQGA 335
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL--RSSVGVMPTEEHTSIEFTG 123
+ + + DG+ +D +R + ++ R++ GV +E
Sbjct: 336 LAIQEYYIRHKDGR------TVDSSAERQKVSRCLVAAVERRATHGV-------RVEVRA 382
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK-- 181
DR GL S+ VL + +++ E+ H D A + ++ + G + R +
Sbjct: 383 ADRSGLLSDFTRVLREHGLSLLRVELKRHKDDAFGIFYLVTDTGGEVRAEALRAVQARVA 442
Query: 182 --ELLFNVLR---GYDDFRKAKTSLSPPGIMNRER 211
++ +V++ G+ R KTS+ P + ER
Sbjct: 443 EMDISLDVVKEAPGWPPVR--KTSVPAPPVAGPER 475
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 190/329 (57%), Gaps = 36/329 (10%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRP F WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPASFRRA----------------WTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 170
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG R A+T L+ P N +RRLHQ++ +D G + + + P
Sbjct: 171 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMT 218
Query: 243 TVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 219 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 278
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER+ VI+CL+AAIERRASE
Sbjct: 279 SDGRPISSEAERQHVIRCLQAAIERRASE 307
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 231 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 290
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 291 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 335
Query: 144 VVNAEIWTHNDRA 156
V +AEI T +D A
Sbjct: 336 VTHAEITTRDDMA 348
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 196/316 (62%), Gaps = 30/316 (9%)
Query: 35 VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+NK+GILL+V+QVL+D++L I KAYI+SDGGWFMDVF+V+D G+KI D + I YI++ L
Sbjct: 1 MNKNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKAL 60
Query: 95 ETDASFAPSLRS-----SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
+++ S SVG+ +HT+IE G DR GL SE+ AVLADL CNV+ AE+
Sbjct: 61 GPESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEV 120
Query: 150 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR----------------GYDD 193
WTH R A VV+V D +TG AI DP R+S I+ L +VLR + +
Sbjct: 121 WTHRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHAN 180
Query: 194 FRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYT 252
F A S +P + +RRLHQ+M D D + RP+VTV + EK Y+
Sbjct: 181 FTDA--SSTPHHL---DRRLHQLMHADVDVAPAAALA--AGGQGDRPEVTVEHCEEKSYS 233
Query: 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 312
V+ ++ +DR KLLFDIVCTLTDM+YVVFH V++ QE YIR DG + + E E
Sbjct: 234 VVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAE 292
Query: 313 RVIQCLEAAIERRASE 328
+VI+ LEAAI RR SE
Sbjct: 293 KVIRSLEAAISRRVSE 308
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ +V+ V ++ +L ++ L D+ V+ A +SS+ + + +
Sbjct: 220 PEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 279
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DGK + E I+ SL +++ +E T +E G DR GL S+V
Sbjct: 280 RKDGKTLLKDEAEKVIR-----------SLEAAISRRVSEGFT-LEVRGRDRVGLLSDVT 327
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
VL + V A++ T +A V +V D S
Sbjct: 328 RVLREHGLTVSRADVTTEGGQATNVFYVRDPS 359
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 212/373 (56%), Gaps = 44/373 (11%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMD---------VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV 108
SSDGGW MD +F+V D G+K+ D + ++IQ+ L + PS R +
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 109 --------GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
G + ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V+
Sbjct: 129 CLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVL 188
Query: 161 HVTDHSTGYAIKDP----KRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERR 212
+VT G A + R I+ L+ V+ + + S+S P G ++ ERR
Sbjct: 189 YVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERR 248
Query: 213 LHQIMFDDRDYERVEKAVG------RVEDKSS------RPQVTVLNIE----KDYTVITM 256
LHQ+M DDRDYE A + DK++ R T ++IE + Y V+ M
Sbjct: 249 LHQLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKM 308
Query: 257 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 316
S+DRPKLLFD VC LTDM YVVFH V + A QE+YIRH DG + S AER++V +
Sbjct: 309 TSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSR 368
Query: 317 CLEAAIERRASEV 329
CL AA+ERRAS V
Sbjct: 369 CLVAAVERRASHV 381
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 212/373 (56%), Gaps = 44/373 (11%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMD---------VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV 108
SSDGGW MD +F+V D G+K+ D + ++IQ+ L + PS R +
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 109 --------GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
G + ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V+
Sbjct: 129 CLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVL 188
Query: 161 HVTDHSTGYAIKDP----KRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERR 212
+VT G A + R I+ L+ V+ + + S+S P G ++ ERR
Sbjct: 189 YVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERR 248
Query: 213 LHQIMFDDRDYERVEKAVG------RVEDKSS------RPQVTVLNIE----KDYTVITM 256
LHQ+M DDRDYE A + DK++ R T ++IE + Y V+ M
Sbjct: 249 LHQLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKM 308
Query: 257 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 316
S+DRPKLLFD VC LTDM YVVFH V + A QE+YIRH DG + S AER++V +
Sbjct: 309 TSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSR 368
Query: 317 CLEAAIERRASEV 329
CL AA+ERRAS V
Sbjct: 369 CLVAAVERRASHV 381
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 187/308 (60%), Gaps = 15/308 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L R++PPRV IDN++C + TV+K+D NKHGILL+++Q L D++L+I K+YI
Sbjct: 28 IDREIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYI 87
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-----PTEE 115
SSDGGW MDVF+V D G K+ DK ++++I+Q L + + SS V P E
Sbjct: 88 SSDGGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEA 147
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +IE GTDRPGLFSE+ VL DL N+++A+ WTHND+ +++ D S I + +
Sbjct: 148 NVAIEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERE 207
Query: 176 RLSTIKELLFNVL-----RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
RL+ + + + NV+ +G D R S G + ERRLHQ+M+ DYE
Sbjct: 208 RLAQVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACH 267
Query: 231 GRVEDKSSR----PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
G + + R V+V + +DY V+ +RS+DRPKLLFDIVC LTDMQY VFH V
Sbjct: 268 GDNDSEHKRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLTDMQYEVFHAAVT 327
Query: 286 TGRTEAYQ 293
+ A Q
Sbjct: 328 SNSPMAEQ 335
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 179/294 (60%), Gaps = 20/294 (6%)
Query: 40 ILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA 98
+LL+ + L++ + ++K YISSD G WFMDVF+V D G+K+ D D + RLE+
Sbjct: 1 MLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADA---DALLARLESSL 57
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
S R++ G E T +E G DRPGL SEV AVL DL CN V A WTH R AA
Sbjct: 58 SAEALPRAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAA 117
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIM 217
+V V D TG I D R+ I+ L +VLRG R A+T L+ P N +RRLHQ++
Sbjct: 118 LVFVRDEETGAPIDDAARVRRIESRLRHVLRG--GARCARTVLADPSAAGNLDRRLHQLL 175
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
+D G + + + P V E+ Y+V+T+ +DRPKLLFD+VCTLTD
Sbjct: 176 NED----------GEADSRGAAPMTAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTD 225
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+ YVV+HG +T A QEFYIR DG PISSEAER+ VI+CL+AAIERRASE
Sbjct: 226 LDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAERQHVIRCLQAAIERRASE 279
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 203 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 262
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 263 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 307
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T +D A V HVTD + A DPK TI E++
Sbjct: 308 VTHAEITTRDDMAMNVFHVTDVAGRPA--DPK---TIDEVI 343
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/306 (43%), Positives = 184/306 (60%), Gaps = 15/306 (4%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
E LI R+ PPRV IDN++ + TV+K+DS N+HGILL++ QVL D++LVI K+YISSD
Sbjct: 12 EIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKSYISSD 71
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE-----HTS 118
GGW MDVF+V D DG K+ D ++ YIQQ L S + S + + E + +
Sbjct: 72 GGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPRVVNLA 131
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE T TD+ G+FSE+ AVL L NV +A WTHNDR A ++H+ D + I + +RL+
Sbjct: 132 IELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-NAERLA 190
Query: 179 TIKELLFNVLR------GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
++ L NV++ G DD + + G + ERRLHQ+M+ D DYER+ G
Sbjct: 191 QVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLRACHG- 249
Query: 233 VEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
E V+V E K Y V+ +RS+DRPKL FD VC LTDMQY VFH V++ + A
Sbjct: 250 -EKGCEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNGSMA 308
Query: 292 YQEFYI 297
Q +
Sbjct: 309 DQGLKV 314
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 206/348 (59%), Gaps = 21/348 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y L R+ RV +DN +C TV+KV+S NK +LL+V++VL D+ L I K Y+
Sbjct: 8 FDPDYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYV 67
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMP--TEEH 116
SSDGGW +DVF+V D +G K+ +K+ I YI+Q + T + ++R S P +
Sbjct: 68 SSDGGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHY 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G +RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I D R
Sbjct: 128 TEIEMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNR 187
Query: 177 LSTIKELLFNVLRGY----DDFRKAKTS-LSPPGIMNR-ERRLHQIMFDDRDYERVEKAV 230
L+TI++ L VLR DD R A+ L G+ + ERRLHQ+MF RD++ V
Sbjct: 188 LATIEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPGQV 247
Query: 231 ----------GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
G +DKS+ + N EK Y+V+ + DRPKL+FD VCTLTDMQ+ VF
Sbjct: 248 STAFPMLSLDGYKKDKSTVVSLDRCN-EKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVF 306
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
H V++ A QE+YIRH DG + + E+ V++ L+AA+ERR E
Sbjct: 307 HASVSSQGPFACQEYYIRHKDGHMLDTADEKCLVVKGLKAAVERRTCE 354
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 145/216 (67%), Gaps = 7/216 (3%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+
Sbjct: 1 HTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPE 60
Query: 176 RLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGR 232
RL ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER G
Sbjct: 61 RLVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGG 117
Query: 233 VEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
+ S R QV++ N EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A
Sbjct: 118 CDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIA 177
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
QE++IR +DG + +E+ER RV QCL AAIERR +
Sbjct: 178 VQEYFIRQMDGCTLGTESERNRVAQCLIAAIERRVT 213
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 177/307 (57%), Gaps = 23/307 (7%)
Query: 44 VIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFA 101
++QVL D++LVI K YISSDG WFMDVF+V D G K+ D+ +I YIQQ + +
Sbjct: 1 MVQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGIT 60
Query: 102 PSLRSSVGVMPTE-----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
++S++ + EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RA
Sbjct: 61 KEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERA 120
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMN 208
A V+++ D G I DP R + +K+ L V+ + R + P G +
Sbjct: 121 AMVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAH 180
Query: 209 RERRLHQIMFDDRDYERV-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDR 261
ERRLH++M+ + DYE ++ + R VT+ Y+++ ++ +DR
Sbjct: 181 TERRLHELMYGEGDYENCFDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDR 239
Query: 262 PKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321
PKLLFD VC L ++Q+VVFH + + A QE++IR +G + +E +RER+ CL AA
Sbjct: 240 PKLLFDTVCALKELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAA 299
Query: 322 IERRASE 328
I RRAS+
Sbjct: 300 ISRRASQ 306
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 151/265 (56%), Gaps = 16/265 (6%)
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
MDVF+V+D G K+ D + RLE+ S T +E G DRP
Sbjct: 1 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAGAGTPTLLELVGADRP 57
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++ L +V
Sbjct: 58 GLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHV 117
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 247
LRG A+ + +N +RRLHQ++ +D + G D++ P T + +
Sbjct: 118 LRG--GALGARMVRADAAAVNMDRRLHQLLNEDGE-------AGSRADQAEAPTPTAVAV 168
Query: 248 ----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR +D
Sbjct: 169 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDER 228
Query: 304 PISSEAERERVIQCLEAAIERRASE 328
PISS ER RVIQCL+AAIERRASE
Sbjct: 229 PISSATERRRVIQCLQAAIERRASE 253
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 133/202 (65%), Gaps = 7/202 (3%)
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+RL ++E L NV+
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 190 G-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
+ + K L+ P G + +RRLHQ+MF D+DYER G + S R QV++ N
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGGCDGSSDRIQVSIEN 117
Query: 247 I-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305
EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A QE++IR +DG +
Sbjct: 118 CKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTL 177
Query: 306 SSEAERERVIQCLEAAIERRAS 327
+E+ER RV QCL AAIERR +
Sbjct: 178 GTESERNRVAQCLIAAIERRVT 199
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 128/173 (73%), Gaps = 3/173 (1%)
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQI 216
A+VV++TD +TG +I DP RL+ IK+LL VL+G D + A T++S G +++RRLHQ+
Sbjct: 2 ASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSV-GSTHKDRRLHQL 60
Query: 217 MFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDM 275
M+ DRDY+ + G D++ + VTV + I+K YTV+ +R DRPKLLFD VCTLTDM
Sbjct: 61 MYADRDYDVDDGDSGSTSDRN-KLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDM 119
Query: 276 QYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
QYVV+HG V EAYQE+YIRHVDG PISSEAER+RVI CLEAA+ RR SE
Sbjct: 120 QYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSE 172
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N V +D+ TV+ + ++ +L + L D+ V+ + ++G +
Sbjct: 81 NKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYY 140
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + +QR+ A R+S G+ +E G DR GL S+
Sbjct: 141 IRHVDGSPISSEAE----RQRVIHCLEAAVRRRTSEGI-------KLELCGEDRVGLLSD 189
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + + +V AE+ T +A V +VTD S
Sbjct: 190 VTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVS 223
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 185/332 (55%), Gaps = 21/332 (6%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
+Y L R+NP ++ IDN++ T I++DS N G L++V+Q + +NL I++A ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------EHT 117
WF DVF V + +G+K+R+ +D++++ L + + S+ G M E E T
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEE---GIFSNAGAMGHEGASGPTEST 117
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+E G D+ G ++V +L + CNV +A +WT+ R A V+ V + G I D +L
Sbjct: 118 VVELAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLE--KGKPIADQVKL 175
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF--DDRDYERVEKAVGRVED 235
+++++ +++ G + + + G+++ +R LHQ+M D R +++
Sbjct: 176 QGLRQIMLDIM-GPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHS----THA 230
Query: 236 KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQ 293
+P ++++ Y +I++ KDR KLLFD VCTL DM+Y V+HG +N+ A Q
Sbjct: 231 ARLKPNISIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGTINSHPDGSATQ 290
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERR 325
E+Y + G P + A E++ LEA+I+RR
Sbjct: 291 EYYAKPRWGRPWDARAA-EKLAAMLEASIQRR 321
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 101/149 (67%), Gaps = 30/149 (20%)
Query: 70 VFNVIDCDGKKIRDKEVIDYIQ-----------------------------QRLETDAS- 99
VF VID DG KIRD +V+DYIQ QR+E++A
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+HVTD+ST AI DP RLSTIKELL NVL
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVL 149
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 186/369 (50%), Gaps = 63/369 (17%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VV+DN + +D T+I +DS N+ G L++V+Q+L ++ L + KA ISSD
Sbjct: 122 EYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKARISSD 181
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM--PTEEHTSIEF 121
GGWF+D F+V D GKK+ L D + VGV ++ T E
Sbjct: 182 GGWFVDEFHVTDA-GKKV------------LSVDTDPGSDAEADVGVFEEASQCSTVFEL 228
Query: 122 TGTDRPGLFSEVCAVLADLHC--------NVVNAEIWTHNDRAAAVVHVTD--------- 164
G DR GL +EV A+L + C V +A +WTHN R A V+ V +
Sbjct: 229 AGNDRIGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGA 288
Query: 165 ----------HSTGYAIKDPKRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGIMNRERR 212
IKD +L+ +++LL ++ G D T+ G+++ ERR
Sbjct: 289 VAAPAPGGGVGGGSCPIKDGIKLARLRQLLLGMMDPSGQDSVVNVATT---KGLIHYERR 345
Query: 213 LHQIMFDDRDYE-----RVEKAVGRVEDKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLF 266
LHQ++ + + + + A + +P+V++ + ++ +Y +I++R +DR KLLF
Sbjct: 346 LHQLLLKEEEAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLF 405
Query: 267 DIVCTLTDMQYVVFHGMVNT--------GR--TEAYQEFYIRHVDGLPISSEAERERVIQ 316
D VCTL D+ Y V+HG V+ G+ + A Q FY+R G + ++
Sbjct: 406 DTVCTLADLNYDVYHGAVDCEVERERAHGQPLSIAVQTFYLRPRFGDCVWDAKRAAKLKY 465
Query: 317 CLEAAIERR 325
LE AI+RR
Sbjct: 466 MLEVAIQRR 474
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 16/231 (6%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I
Sbjct: 98 STEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPII 157
Query: 173 DPKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
DP R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 158 DPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYE 217
Query: 225 RV-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+
Sbjct: 218 NCFDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDRPKLLFDTVCALKELQF 276
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
VVFH + + A QE++IR +G + +E +RER+ CL AAI RRAS+
Sbjct: 277 VVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQ 327
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 135/227 (59%), Gaps = 9/227 (3%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP V IDN T AD T+I +DS N+ G L++V+Q+L ++ L + KA ISSD
Sbjct: 45 EYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS----- 118
GGWF+D F+V D GKK+ ++ + I++ L DA P + GV E S
Sbjct: 105 GGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDAD--PGSDNESGVDSAFEEASQCSTL 161
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
E G DR GL ++V +L C V +A +WTHN R A V+ V D STG IKD +L+
Sbjct: 162 FELAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLA 221
Query: 179 TIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYE 224
+++LL N++ D ++ ++S G+++ ERRLHQ++ + + +
Sbjct: 222 RLRQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN---------TGR 288
+P+V V + ++DY ++ +R +DR KLLFD VCTL D+ Y V+HG V+
Sbjct: 504 KPEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKV 563
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+ A Q FY+R G + ++ LE AI+RR +
Sbjct: 564 SIAVQTFYMRPRYGDAYWDPRKAAKLKYMLECAIQRRQPQ 603
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 90/114 (78%), Gaps = 4/114 (3%)
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTD 274
+MF DRDYERV+ D+ RP VTV+N +KDY+V+T+ SKDRPKLLFD VCTLTD
Sbjct: 1 MMFADRDYERVDDDDF---DEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTD 57
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
MQYVVFH ++ +AYQE+YIRH+DG P+ S+AER+RVIQCLEAAIERR SE
Sbjct: 58 MQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSE 111
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 22 PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIR 81
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S V
Sbjct: 82 HIDGSPVKS----DAERQRVIQCLEAAIERRVSEGL-------KLELCTTDRVGLLSNVT 130
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V+ S GY + D K + +I++ + N + +G
Sbjct: 131 RIFRENSLTVTRAEVTTKGDKAVNTFYVSGAS-GYLV-DSKTIESIRQAIGNTILKVKGT 188
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
D K+ SP R L +F R +
Sbjct: 189 PDELKSTHQDSPT------RSLFSGLFKSRSF 214
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 139/243 (57%), Gaps = 19/243 (7%)
Query: 70 VFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMP--TEEHTSIEFTGTD 125
VF+V D +G K+ K+ I+YI+Q + T S F + + + P +T IE G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I DP RL++I++ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 186 NVLRGY----DDFRKAKTS-LSPPGIMNR-ERRLHQIMFDDRDYE----RVEKAVGRVE- 234
VL +D R+A+ L G+ + ERRLHQ+MF +D++ +V A +
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPGQVSAAFPMLSL 197
Query: 235 ---DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
K SR V+V EK Y+VI++ DRPKL+FD VCTLTDMQ+ VFH V++
Sbjct: 198 DGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASVSSCGPF 257
Query: 291 AYQ 293
A Q
Sbjct: 258 ACQ 260
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 83/98 (84%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA 98
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA 104
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Query: 210 ERRLHQIMFDDRDYERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFD 267
ERRLHQIM+ DRDY+ R P VTV N EK YT + +R DRPKLLFD
Sbjct: 3 ERRLHQIMYADRDYDVTNPNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFD 62
Query: 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDMQYVV+H V EAYQE++IRH+DG PISSEAER+R+I CLEAAI+RR S
Sbjct: 63 AVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS 122
Query: 328 E 328
E
Sbjct: 123 E 123
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Query: 210 ERRLHQIMFDDRDYERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFD 267
ERRLHQ+M+ DRDY+ R P VTV N EK YT + +R DRPKLLFD
Sbjct: 3 ERRLHQMMYADRDYDVTNLNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFD 62
Query: 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDMQYVV+H V EAYQE++IRH+DG PISSEAER+R+I CLEAAI+RR S
Sbjct: 63 AVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS 122
Query: 328 E 328
E
Sbjct: 123 E 123
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 11/126 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ K + RMNPPRV +DNN+ + T+IKVDS NK G LL+V+QVLND+NL I++AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-----SVGVMPTEE 115
SSDG WFMDVF+V D G K+ + +V + IQQ S P RS SVGV E
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQ------SLGPRTRSFRSKRSVGVQSAVE 123
Query: 116 HTSIEF 121
HT+IE
Sbjct: 124 HTTIEL 129
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMD-VFNVID 75
V IDN +C D T+IKVDS+NK GILL+V+Q+L D++L+I KAY+SSDGGWFMD VF+ D
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLR----SSVGVMPTEEHTSIEFTGTDRPGLFS 131
G KI D++ IDYI++ L + ++ VG+ ++T+IE TG DRPGL S
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 132 EVCAVLADL 140
E+ AVLA L
Sbjct: 121 EISAVLAGL 129
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ K + RMNPPRV +DNN+ + T+IKVDS NK G LL+V+QVLND+NL +++AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D +G K+ + +V + IQQ L S R SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSLGPRTCSFRSKR-SVGVQSAVEHTTIE 128
Query: 121 F 121
Sbjct: 129 L 129
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 205 GIMNRERRLHQIMFDDRDYERVEKAVGRVE---DKSSRPQVTVLNI-EKDYTVITMRSKD 260
G + +RRLHQ++F DRDYER + S RP++ + EK Y+ ++++ KD
Sbjct: 28 GSTHMDRRLHQMLFADRDYERASVTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCKD 87
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
R KL+FDIVCTLTDMQYVVFH +++ A QE++IRH+DG + +E E+ERV +C+EA
Sbjct: 88 RAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVTKCIEA 147
Query: 321 AIERRASE 328
AI+RR SE
Sbjct: 148 AIQRRVSE 155
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P++ I+ + + V ++ ++ ++ L D+ V+ A ISS+G + + +
Sbjct: 66 PKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIR 125
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + I+ QR R S GV S+E DR
Sbjct: 126 HMDGCTLDTEGEKERVTKCIEAAIQR-----------RVSEGV-------SLELCAKDRV 167
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
GL SEV +L + V A + T ++ V +V D
Sbjct: 168 GLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRD 204
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 98/157 (62%), Gaps = 18/157 (11%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK--------VDSVNKHGILLQVIQVLNDVNLV 54
DE+ KL+ RMNPPRV +DN + AT++K VDS NK+G LL+V+QVL ++ L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRS-SVGVM 111
IK+AYISSDG WFMD +N K+ D VID I+ L + SF AP RS +
Sbjct: 72 IKRAYISSDGEWFMDGWN-------KLYDGLVIDRIELSLGAGSLSFRAPPERSVELEAE 124
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
T+IE G DRPGL SEV AVL DL CN+V++E
Sbjct: 125 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 161
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 10/71 (14%)
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
KDRP LL ++ LTD++ + + +E+YIRH+D P++S ER+R+ +C
Sbjct: 136 GKDRPGLLSEVFAVLTDLKCNIV----------SSEEYYIRHLDDSPVTSGDERDRLGRC 185
Query: 318 LEAAIERRASE 328
LEAAI+RR +E
Sbjct: 186 LEAAIQRRNTE 196
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 12/191 (6%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VVIDN T D TVI +DS N+ G L++V+Q L ++ L I+ A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTSIEF 121
GGWF+D F V + KI D+ I+ I++ L ETDA + E T E
Sbjct: 105 GGWFVDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTARDK--------ELCTVFEL 156
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++
Sbjct: 157 AGRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPPKLDRLE 214
Query: 182 ELLFNVLRGYD 192
++L+++L G D
Sbjct: 215 QILYDMLGGGD 225
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 309
+Y ++T+R +DR KL FD VCTL DM Y ++H +++ A Q FY+R G + E
Sbjct: 560 NYWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECVWDER 619
Query: 310 ERERVIQCLEAAIERR 325
++ LE+A++RR
Sbjct: 620 RAAKLRYMLESAVQRR 635
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VVIDN+T D TVI +DS N+ G L++V+Q L ++ L I+ A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
GGWF+D F V + K+ D I+ I++ L ++ + S + + T E G
Sbjct: 105 GGWFVDEFFVTETPKGKLLDPRKINIIRKVLSVESDSSASYKDK------DICTVFELAG 158
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DR GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++++
Sbjct: 159 RDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPVKLDRLEQI 216
Query: 184 LFNVLRGYD 192
L+++L D
Sbjct: 217 LYDMLGSGD 225
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 309
+Y ++T++ +DR KL FD VCTL DM Y ++H +++ A Q FY+R G I E
Sbjct: 619 NYWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECIWDER 678
Query: 310 ERERVIQCLEAAIERR 325
++ LE+A++RR
Sbjct: 679 RAAKLRYMLESAVQRR 694
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R++PP + IDN T + +DS N+ G L+ ++Q +++L I A ISSDGGWF+DV
Sbjct: 463 RVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDV 522
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---RSSVGVMPTEEHTSIEFTGTDRP 127
F++ + +G+K+R+ + + I+Q L L M E T E G DRP
Sbjct: 523 FHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGPDRP 582
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL +EV +L CNV +A +WT+ R A V+ +T+ G + D +L +++L+ +
Sbjct: 583 GLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE--KGLPVVDGIKLQRLRQLVLGI 640
Query: 188 L 188
+
Sbjct: 641 M 641
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SE+ AVLAD CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLFNVLRGYDDFRKAKTSLS 202
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SE+ AVL D CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLFNVLRGYDDFRKAKTSLS 202
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 25/153 (16%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDY 89
+++ S NKHGILL ++QVL D +L+I KAYISSDG W MDVF+V D DG K+ D+ +ID+
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 90 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
IQQ T +E TD+ G S+ + + +V A+I
Sbjct: 61 IQQ-----------------------GTRLELCRTDQIGPLSDATRIFRENGLSVTRADI 97
Query: 150 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ +++ V +VTD + + D K + I++
Sbjct: 98 TSRDEKGVDVFYVTDVAGNFV--DSKTVEAIRQ 128
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAV 230
D +R++ I+ L ++L G + P + + ERRLHQ+M DRD E E+A
Sbjct: 97 DTERMARIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQE--ERAT 154
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
S RP V+V + +E+ Y+V+T++ + RPKLL D+VCTLTDM YVVFH ++T
Sbjct: 155 -----TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGD 209
Query: 290 EAYQEFY 296
+A+QE +
Sbjct: 210 QAHQESH 216
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
AVL+DL+C+VV+A++WTHN R A V+++ D S+G I D +R+S I+ L NVL +D
Sbjct: 3 AVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDNDV 62
Query: 195 RK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
AKT +S +M+ E RLHQ+MF+ RDYER
Sbjct: 63 NSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER 94
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 196 KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVI 254
A ++ + + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+
Sbjct: 22 SAVATVPAASVAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVV 74
Query: 255 TMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
T++ + RPKLL D+VCTLTDM YVVFH ++T +A+QE +
Sbjct: 75 TVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 8/93 (8%)
Query: 205 GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPK 263
+ + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+T++ + RPK
Sbjct: 31 SVAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVVTVQCRYRPK 83
Query: 264 LLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
LL D+VCTLTDM YVVFH ++T +A+QE +
Sbjct: 84 LLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 15/69 (21%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C A VI VL ++ L++ KAYIS
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAI---------------VIHVLTNLKLIVTKAYIS 68
Query: 62 SDGGWFMDV 70
SDGGWFMDV
Sbjct: 69 SDGGWFMDV 77
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 103 SLRSSVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
L +V V+P E + + D PGLFS++ +A N+++A+I T +D A +
Sbjct: 711 GLTVAVEVLPDPERAVSEVLVATDDHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDI 770
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
G+AI+ +R++ + + + +VL G KA PP + R R L
Sbjct: 771 FTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKALRR-QPPRLPERTRHL------- 822
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
+ P+V V N K +TVI + +DRP L+ + LTD+ +
Sbjct: 823 ----------------TVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQI 866
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
V+T FY++ V G+ I A+ ++ + LEAAI
Sbjct: 867 SSARVSTYGERVVDSFYVKDVFGMKIVHRAKLAQIREALEAAI 909
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TVI+++ ++ G L V + L DV + I A +S+ G +D F V
Sbjct: 825 PPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G KI + + I++ LE
Sbjct: 885 KDVFGMKIVHRAKLAQIREALE 906
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Query: 206 IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKL 264
+ + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+T++ + RPKL
Sbjct: 32 VAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVVTVQCRYRPKL 84
Query: 265 LFDIVCTLTDMQYV 278
L D+VCTLTDM YV
Sbjct: 85 LLDVVCTLTDMDYV 98
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 24/213 (11%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAEGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P +L + L+ L G D R+ S G+ R R +H
Sbjct: 805 FEEPHQLGRLNHLVEQALSGRLDIRQGIAEASHHGLSRRMRAIH---------------- 848
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N D +TVI + +DRP LL D+ L+ + + T
Sbjct: 849 -------VPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGM 901
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FY+R + G+ I R+ + L A++
Sbjct: 902 RAVDVFYVRDLLGMKIVDPVRLNRIREALLASL 934
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 8 LIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
L RRM PPRVVIDN TVI+V+ ++ G+L V L+ +L I A+I++
Sbjct: 840 LSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTY 899
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
G +DVF V D G KI D ++ I++ L AS P
Sbjct: 900 GMRAVDVFYVRDLLGMKIVDPVRLNRIREALL--ASLTP 936
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
MDVF+V D G+K+ D VI YIQQ L T A + P E T++E TG R
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELTGPGRA 53
Query: 128 GLFSEVCAVLADLHCNVVNAEIW 150
GL SEV AVLAD+ C V +A W
Sbjct: 54 GLLSEVFAVLADMQCGVADARAW 76
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 29/182 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P V+IDN + A ATV++V N G LL + L ++ L I K + G F V
Sbjct: 12 PIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMSGDSTKTSKFYV 71
Query: 74 IDCD-GKKIRDKEVIDYIQQRLETD------------ASFAPSLRSSVGVM--------- 111
ID + G+K+ E ++ I+Q + T+ + AP+ GV+
Sbjct: 72 IDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQAKAPTRAGGEGVLGKVKKKVQT 131
Query: 112 -----PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
P H+ +E TDRPGL +V L DL VV+AE+ T D+A+ +++VT H
Sbjct: 132 GIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKASDIIYVT-HK 190
Query: 167 TG 168
G
Sbjct: 191 GG 192
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PGLFS + LA + N+V+A +T D A V G ++ RL +
Sbjct: 745 FAMVDHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQDGDGNPYEE-SRLQRL 803
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++++ LRG R+A D+D + + RV+ K
Sbjct: 804 RQMIVRTLRGEVVAREA--------------------LKDKDKIKKRERAFRVDTK---- 839
Query: 241 QVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
+T N + YT+I + ++DRP LL+D+ TL + + ++ T + FY++
Sbjct: 840 -ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKD 898
Query: 300 VDGLPISSEAERERVIQCLEAAIERRA 326
+ GL SEA+R+ + + L AI + A
Sbjct: 899 MVGLKYYSEAKRQSLERKLREAIAQGA 925
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I F +D PG+FS + LA + NVV+A +T D A V G+ DP +
Sbjct: 740 TRICFALSDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGDGHPY-DPHK 798
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L ++ + +LRG ++ G+ R++ I +RD+ RV ++ +
Sbjct: 799 LPRLRGTIGKILRG--------EVIAREGLDTRDK----IKKRERDF-RVPTSIAFDNEG 845
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
S + YT++ + ++DRP LL+D+ TL + ++ T + FY
Sbjct: 846 S-----------EIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFY 894
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRAS 327
++ + GL I S+A++ + + L AI+ A+
Sbjct: 895 VKDMFGLKIYSDAKQAALERKLREAIDSGAA 925
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 24/200 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+DP +L + L+ L G D K G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGIAEARHRGASRRMRAIH---------------- 848
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N D +TVI + +DRP LL DI TL+ + + T
Sbjct: 849 -------VPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 290 EAYQEFYIRHVDGLPISSEA 309
A FY+R + G+ I+ A
Sbjct: 902 RAVDVFYVRDLLGMKITDPA 921
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVV+DN TVI+++ ++ G+L + + L+ +L I A+I++ G
Sbjct: 842 RRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG 109
+DVF V D G KI D + +I+ L + + P +S+
Sbjct: 902 RAVDVFYVRDLLGMKITDPARLAHIRDSLLSSLTPLPVKKSAAA 945
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 26/219 (11%)
Query: 107 SVGVMPTEEHTSIEFT--GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+V P E E T D PGLFS++ LA ++V+A I T +D A
Sbjct: 744 TVEAYPIPERGVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQ 803
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
G + ++P +L + L+ L G D RK S R R +H
Sbjct: 804 DGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIH---------- 853
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
P+V + N D +TVI + +DRP LL D+ L+ +
Sbjct: 854 -------------VPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAH 900
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ T A FY+R + G+ I+ R+ + L A++
Sbjct: 901 ITTYGMRAVDVFYVRDLLGMKITDPVRLARLRETLLASL 939
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 2 DDEYAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKK 57
D + RRM PPRVVIDN TVI+V+ ++ G+L V L+ +L I
Sbjct: 839 DASHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISS 898
Query: 58 AYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
A+I++ G +DVF V D G KI D + +++ L + AP
Sbjct: 899 AHITTYGMRAVDVFYVRDLLGMKITDPVRLARLRETLLASLTSAP 943
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+IDN + A ATV++V G L+ I L ++ L I + ++ G F V+
Sbjct: 275 PKVIIDNKSDAFATVLEVTFGTYLGELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVL 334
Query: 75 DCD-GKKIRDKEVIDYIQQRLETD--------ASF----APS-----------LRSSV-- 108
D D G+K+ E ++ I+Q + T+ A F AP+ +RS+V
Sbjct: 335 DRDTGEKVTKSERLEEIRQTVLTNMLAFHPESAEFIQAKAPTRAGANDSPLGKVRSTVET 394
Query: 109 GVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
G+ T E HT ++ TDRPGL +V L DL VV+AE+ T ++A ++++T
Sbjct: 395 GIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYIT 451
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE-LLFN 186
G + A L +L ++ E+ D + +V D TG + +RL I++ +L N
Sbjct: 299 GELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVLDRDTGEKVTKSERLEEIRQTVLTN 358
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
+L + + + + +P + L ++ VE +
Sbjct: 359 MLAFHPESAEFIQAKAPTRAGANDSPLGKVR------STVETGIK-------------CT 399
Query: 247 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 306
EK +T + + + DRP LL D+V TL D+ V V+T +A YI H G P+S
Sbjct: 400 AEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITHRGG-PLS 458
Query: 307 SEAER 311
E+
Sbjct: 459 PAMEQ 463
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 731 TEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTNGEAFNDKSK 790
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +++ L V+ G L P + R + + D++ AV +VE
Sbjct: 791 LDKLRKTLEQVISG---------RLRPSQEIERRQ-----IKDNKH----RTAVFKVE-- 830
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P V + N + +TVI + ++DR LL+D+ TL D+ + ++T A F
Sbjct: 831 ---PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVF 887
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y++ V GL I S + +V + L +E
Sbjct: 888 YVKDVFGLKIDSRTKFLQVKETLTQTLE 915
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 23 TCADATVIKVDSVNKHGILLQVI--QVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKK 80
T DAT I V + + G+ Q+ L N+V K +DG +D F + D +G+
Sbjct: 726 TDIDATEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADG-MALDTFFIQDTNGEA 784
Query: 81 IRDKEVIDYIQQRLET--DASFAPSL------------RSSV-GVMP--------TEEHT 117
DK +D +++ LE PS R++V V P + HT
Sbjct: 785 FNDKSKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHRTAVFKVEPNVIIDNKASRTHT 844
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE T DR GL +V L DL + +A I T +RA V +V D G I +
Sbjct: 845 VIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKD-VFGLKIDSRTKF 903
Query: 178 STIKELLFNVL 188
+KE L L
Sbjct: 904 LQVKETLTQTL 914
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++ + ++ G+L V + L D++L I A IS+ G +DVF V
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 75 DCDGKKIRDK----EVIDYIQQRLE 95
D G KI + +V + + Q LE
Sbjct: 891 DVFGLKIDSRTKFLQVKETLTQTLE 915
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLF+++ +A ++V+A I T ++ A +TG A
Sbjct: 776 LPARGVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDATGEA 835
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK--AKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
+P RL+ + + L G D AKT+ S +++R R +H
Sbjct: 836 FDEPHRLTKLFSITERALSGRLDIATEIAKTNASGQ-LLSRTRAIH-------------- 880
Query: 229 AVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+V + N +TVI + +DRP LL D+ L +M+ ++ + T
Sbjct: 881 ---------VPPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTY 931
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
A FY++ + G+ ++ E +++ L A +++
Sbjct: 932 GVRAVDVFYVKDLSGMKVTDENRLKKIRDRLMAGLKK 968
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V LN++ L I A+I++ G +DVF V
Sbjct: 882 PPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYV 941
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ D+ + I+ RL
Sbjct: 942 KDLSGMKVTDENRLKKIRDRL 962
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTNGEAFNDSTK 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +++ L V+ G + P + R + +D + AV +VE
Sbjct: 787 LDRLRDTLEKVISG---------QIRPSQEIERRQ--------TKD-NKHRTAVFKVE-- 826
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P V + N + +TVI + ++DR LL+DI L D+ + ++T A F
Sbjct: 827 ---PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVF 883
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y++ V GL I S + +V + L AI
Sbjct: 884 YVKDVFGLKIDSRTKFVQVKETLTQAI 910
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 22 NTCADATVIKVDSVNKHGILLQVI--QVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
+T DAT I V + + G+ Q+ L N+V K +DG +D F V D +G+
Sbjct: 721 DTEIDATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADG-MALDTFFVQDTNGE 779
Query: 80 KIRDKEVIDYIQQRLET--DASFAPSL------------RSSV-GVMP--------TEEH 116
D +D ++ LE PS R++V V P + H
Sbjct: 780 AFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEPNVIIDNKASRTH 839
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE T DR GL ++ L DL + +A I T +RA V +V D G I +
Sbjct: 840 TVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD-VFGLKIDSRTK 898
Query: 177 LSTIKELLFNVLR 189
+KE L +R
Sbjct: 899 FVQVKETLTQAIR 911
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++ + ++ G+L + + L D+++ I A IS+ G +DVF V
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 75 DCDGKKI 81
D G KI
Sbjct: 887 DVFGLKI 893
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 92 QRLETDASFA-PSLRSSVGVMPTEEH---------TSIEFTGTDRPGLFSEVCAVLADLH 141
Q L+T+ F +L ++G E H T +F D PG+FS + +A +
Sbjct: 707 QGLDTNTQFIFANLFKNLGSKKIESHFEVDQDRDATRAQFVMQDHPGIFSRLTGAIALAN 766
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG---YDDFRKAK 198
NV++A +T +D A V + G D +L +K+L+ L G D K +
Sbjct: 767 ANVIDARTYTTSDGYATPVFWIQDNDGKPF-DFSKLGKLKKLIDQTLAGDVIARDVLKVR 825
Query: 199 TSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVIT 255
P RER I FD++ + YT+I
Sbjct: 826 NKYKP-----RERNFKVPTDITFDNQGSD-------------------------IYTIIE 855
Query: 256 MRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVI 315
+ ++DR LLFD+ TL + + ++ T +A FY++ + GL I+SE +++ +
Sbjct: 856 VDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDMIGLKITSENKQQIIK 915
Query: 316 QCLEAAIE 323
L+ AIE
Sbjct: 916 GKLQEAIE 923
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++H +L + + L + N+ I A I++ G +DVF V
Sbjct: 838 PTDITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G KI + I+ +L+
Sbjct: 898 KDMIGLKITSENKQQIIKGKLQ 919
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
FMDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGR 78
Query: 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
GL SEV AVLAD+ C VV W H ++ + + T D +R++ I+
Sbjct: 79 TGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIE 128
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 24/200 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+DP +L + L+ L G D K + G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGISEARHRGASRRMRAIH---------------- 848
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N D +TVI + +DR LL DI TL+ + + T
Sbjct: 849 -------VPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 290 EAYQEFYIRHVDGLPISSEA 309
A FY+R + G+ I+ A
Sbjct: 902 RAVDVFYVRDLLGMKITDAA 921
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TVI+++ ++ G+L + + L+ +L I A+I++ G
Sbjct: 842 RRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G KI D + +I+ L
Sbjct: 902 RAVDVFYVRDLLGMKITDAARLAHIRASL 930
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKIRDK- 84
AT I V + K G+ + + L ++L I+ A I + G G+ +D F V+ DG+ I D
Sbjct: 699 ATQIFVHTKAKLGLFALLAEALEQLDLSIQDARIYNSGTGYTLDTFYVLGADGESIGDNP 758
Query: 85 ----EVIDYIQQRLETDASFAPSL---------------RSSVGVMPTEEHTSIEFTGTD 125
+I+++Q+ LE F ++ R+S+ + HT +E D
Sbjct: 759 SRIAHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTSMATDLNKGHTVLEVITPD 818
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
RPGL + + + + NA+I T +R V +TD + I DPK I++
Sbjct: 819 RPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQ-RPIDDPKLCEEIQQ 874
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 25/125 (20%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQ---------------RLETD--ASFAPSLRSSVG 109
FMDVF+V D G K+ + VI YI+Q R D ++ SL+S +G
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQS-LG 257
Query: 110 V-------MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
+ M E T++E TG DR GL SEV VLAD+ C VV WTH ++ +
Sbjct: 258 MWNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFL 317
Query: 163 TDHST 167
D T
Sbjct: 318 RDEET 322
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+TG D PGLFS++ +A N+V+A+I T + A S G P +L+ +
Sbjct: 733 YTG-DHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRL 791
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
+ VL G R A+ S G N R H R V++K SR
Sbjct: 792 ANTIEQVLSGR--LRLAQELASRKG--NLPSRAHVFKVPPRVL---------VDNKPSR- 837
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
+TVI + +DRP LL+DI +T + + ++T FY++ V
Sbjct: 838 ---------SHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDV 888
Query: 301 DGLPISSEAERERVIQCLEAAIERRAS 327
G + E + ER+ L AA++ + S
Sbjct: 889 FGHKVEHERKLERIRVTLLAALKEQNS 915
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TVI+++ ++ G+L + + + L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D G K+ + ++ I+
Sbjct: 886 KDVFGHKVEHERKLERIR 903
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVG 109
++ I+ G +D F V D +G + + + I+Q L A L S G
Sbjct: 755 IVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRLANTIEQVLSGRLRLAQELASRKG 814
Query: 110 VMPTE------------------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+P+ HT IE G DRPGL ++ + + L + +A I T
Sbjct: 815 NLPSRAHVFKVPPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHIST 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ +R V +V D G+ ++ ++L I+ L L+
Sbjct: 875 YGERVVDVFYVKD-VFGHKVEHERKLERIRVTLLAALK 911
>gi|329891103|ref|ZP_08269446.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846404|gb|EGF95968.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 812
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 585 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 644
Query: 170 AIKDPKRLST-IKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 227
++P+RL+ +K + VL+G A+TS L PP + R + +FD R R++
Sbjct: 645 GGREPRRLAILVKAMERAVLKG------ARTSTLEPPRVSAR-----RAVFDVRPVVRID 693
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
G VI + DRP LL D+ T++ Y V +
Sbjct: 694 ADTG-----------------TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASF 736
Query: 288 RTEAYQEFYIRHVDGLPISSEAERE 312
A FYI DG S+A E
Sbjct: 737 GERAVDGFYITDADGRKPKSKARLE 761
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID +T A VI+V ++ G+L + + ++ + A+++S G +D F +
Sbjct: 688 PVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYIT 747
Query: 75 DCDGKKIRDKEVIDYIQ 91
D DG+K + K ++ ++
Sbjct: 748 DADGRKPKSKARLEALK 764
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T F D PG+FS + LA + N+V+A +T D A V + G+ R
Sbjct: 730 TRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYAS-DR 788
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L ++ ++ L+G I+ RE DRD + ++ R
Sbjct: 789 LPRLRAMIQRTLKGE--------------IVARE------ALADRDKPKKRESAFRFPT- 827
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+T N D YTVI + ++DRP LL+D+ TL D + ++ T + F
Sbjct: 828 ----HITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTF 883
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y++ + GL + + RE + + L AI+
Sbjct: 884 YVKDMFGLKLHQQNRREALEKKLRQAIK 911
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN TVI+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 826 PTHITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + ++++L
Sbjct: 886 KDMFGLKLHQQNRREALEKKL 906
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A V + G+ + RL +
Sbjct: 736 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPF-EADRLPRL 794
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+ ++ L+G R+A S + RER I FD+ E
Sbjct: 795 RNMIQKTLKGEVVPREAIKSRDK--LKKRERAFRVPTHITFDNDGSE------------- 839
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 840 ------------IYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 298 RHVDGLPISSEAERERVIQCLEAAIE 323
+ + GL S+++R + + L AAIE
Sbjct: 888 KDMFGLKFHSDSKRAALERKLRAAIE 913
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A + G + + +RL +
Sbjct: 737 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAEG-SPYEAERLQRL 795
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L+G D + S + RER I FD+ E
Sbjct: 796 RDMIRKTLKG--DVVAGEAIRSRDKLKKRERAFKVPTHITFDNEGSE------------- 840
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 841 ------------IYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRA 326
+ + GL SEA+++ + + L AI A
Sbjct: 889 KDMFGLKFHSEAKQKALEKKLRTAISEGA 917
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 829 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS 99
D G K + ++++L T S
Sbjct: 889 KDMFGLKFHSEAKQKALEKKLRTAIS 914
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT+++V ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 77 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 136
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ P E+ H
Sbjct: 137 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 196
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL EV +LAD++ +V +AEI T A HV+ G
Sbjct: 197 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS--YGG 254
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 255 AALN-----SSLSQVVVNCLRYY--LRRPETDI 280
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E + DR G + L DL +V + T ++T +G ++DP
Sbjct: 90 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 149
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L +I+ + N L Y + ++ GI E++L D D V
Sbjct: 150 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL------DVDIAT------HVHV 197
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
K+ P+ ++L +E + DRP LL +++ L D+ V ++T A +F
Sbjct: 198 KADGPKRSLLYLE---------TADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKF 248
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
++ + G ++S + V+ CL + R +++
Sbjct: 249 HVSY-GGAALNSSLS-QVVVNCLRYYLRRPETDI 280
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 59/100 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +DN+ TVI+V+ +++ G+L + ++D++L I+ A+IS+ G +D F V
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
D G K+ + I I++RL++ A SSV MP++
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSVLESAEGEVSSVNAMPSQ 956
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 27/214 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I+ D P L S++ A N+ +++I+T D A V + + +R
Sbjct: 760 TRIKVLAPDHPRLVSQLAGACAGAKANIADSQIFTLTDGRALDVMTISRAFENEEDEMRR 819
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I E + +LRG IM+R ++ R R +
Sbjct: 820 ARRICENIEKLLRG-------------ETIMSR------LIGQSRGTRRADLF------- 853
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+P++TV N + TVI + DR LL DI ++D+ + ++T + F
Sbjct: 854 EVKPKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAF 913
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
Y+ + G ++SEA+ R+ + L++ +E EV
Sbjct: 914 YVTDLIGAKVTSEAKIARIERRLQSVLESAEGEV 947
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT+++V ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ P E+ H
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL EV +LAD++ +V +AEI T A HV+ G
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS--YGG 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 259 AALN-----SSLSQVVVNCLRYY--LRRPETDI 284
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E + DR G + L DL +V + T ++T +G ++DP
Sbjct: 94 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 153
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L +I+ + N L Y + ++ GI E++L D D V
Sbjct: 154 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL------DVDIAT------HVHV 201
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
K+ P+ ++L +E + DRP LL +++ L D+ V ++T A +F
Sbjct: 202 KADGPKRSLLYLE---------TADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKF 252
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
++ + G ++S + V+ CL + R +++
Sbjct: 253 HVSY-GGAALNSSLS-QVVVNCLRYYLRRPETDI 284
>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]
Length = 290
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDTDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ A A L ++ G++P +E H
Sbjct: 144 KADTGRKVDDSELLEAVRMTILNNMIQYHPESSAQLA--LGAAFGLVPPKEQVDVDIATH 201
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 202 LTISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVS--Y 259
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++E+L N LR Y
Sbjct: 260 KGKAIIKP-----LQEVLANSLRYY 279
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T TG + D
Sbjct: 95 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAITKADTGRKVDDS 154
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+ L ++ + N + Y A+ +L G++ + ++
Sbjct: 155 ELLEAVRMTILNNMIQYHPESSAQLALGAAFGLVPPKEQV-------------------- 194
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D +T+ + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 195 -DVDIATHLTISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKA 253
Query: 294 EFYIRH 299
+F++ +
Sbjct: 254 KFHVSY 259
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T F D PG+FS + LA + N+V+A +T D A V + G+ R
Sbjct: 738 TRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-ADR 796
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L ++ ++ L+G I+ RE RD + +A R
Sbjct: 797 LPRLRTMIQRTLKGE--------------IVARE------ALAGRDKPKKREAAFRFPT- 835
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
VT N D YTVI + ++DRP LL+D+ TL D + ++ T + F
Sbjct: 836 ----HVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTF 891
Query: 296 YIRHVDGL----PISSEAERERVIQCLEAAIER 324
Y++ + GL P EA +R+ Q ++ +ER
Sbjct: 892 YVKDMFGLKLHQPQRREALEKRLRQAIKEGVER 924
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V DN TVI+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 834 PTHVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + +++RL
Sbjct: 894 KDMFGLKLHQPQRREALEKRL 914
>gi|89068998|ref|ZP_01156379.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
gi|89045367|gb|EAR51432.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
Length = 941
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 100 FAPSLRSSVG-------VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
FA LR +G + P E+ T + D PG+FS +C LA + N+ +A +
Sbjct: 726 FARLLRGGIGHDEVRFEITPDEDRDATRVCIVMEDHPGIFSRMCGALALVQANIKDARTF 785
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
T D A G+ + RL +++++ L+G ++A
Sbjct: 786 TSKDGYACAAFWVQDQDGHPY-ETDRLPRLRDMIGKTLKGEVVAKEA------------- 831
Query: 211 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD----YTVITMRSKDRPKLLF 266
F DRD + +A +V T + + D YT+I + ++DRP LL+
Sbjct: 832 -------FRDRDKLKKREAAFKVP--------TSITFDNDGSEIYTIIEVDTRDRPGLLY 876
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
D+ TL + ++ T + FY++ + GL SE+ R + L AI + A
Sbjct: 877 DLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKFRSESRRRALEAKLRDAIRQGA 936
Query: 327 S 327
Sbjct: 937 Q 937
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 848 PTSITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYV 907
Query: 74 IDCDGKKIRDK 84
D G K R +
Sbjct: 908 KDMFGLKFRSE 918
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A + G+ + RL +
Sbjct: 738 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDADGHPF-EADRLPRL 796
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ LRG R+A S I RER I FD+ E
Sbjct: 797 RQMIDKTLRGEVIPREAIKSRDK--IKKRERAFRVPTHITFDNDGSE------------- 841
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 842 ------------IYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 298 RHVDGLPISSEAER----ERVIQCLEAAIERRAS 327
+ + GL SEA++ ++ + + A +ER S
Sbjct: 890 KDMFGLKFHSEAKQRSLDRKLREAISAGVERAES 923
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L +N+ I A I++ G +D F V
Sbjct: 830 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 74 IDCDGKKI 81
D G K
Sbjct: 890 KDMFGLKF 897
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 127 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDVATHVIV 185
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL EV ++AD++ +V +AEI T A HV+
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEGLVAKDKFHVS------ 239
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 240 -YRGAKLNSSLSQVLVNCLRYY--LRRPET 266
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A V + G+ + RL +
Sbjct: 736 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPF-ESDRLPRL 794
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+ ++ L+G R+A S + RER I FD+ E
Sbjct: 795 RNMIQKTLKGEVVPREAIKSRDK--LKKRERAFRVPTHITFDNDGSE------------- 839
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 840 ------------IYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL SE++R + + L AAI
Sbjct: 888 KDMFGLKFHSESKRAALERKLRAAI 912
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + ++++L
Sbjct: 888 KDMFGLKFHSESKRAALERKL 908
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V +++ NL I A+I++ G +DVF V
Sbjct: 882 PPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYV 941
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ +D I+ RL
Sbjct: 942 KDLFGLKITDKKRLDEIRDRL 962
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 762 EADAKDAP-LTVEVLPLPARGVTEVTVYTIDVPGLFSKIAGALALAGASIVDARIHTMMH 820
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + G A ++ RL+ + L+ L G D T ++ G + R+
Sbjct: 821 GMALDTFWIQDTAGSAYEETHRLARLSSLIEQALSGQLDI---GTEIARAGFGHMPLRMR 877
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLT 273
I P+V + N + YTVI + +DRP LL D+ ++
Sbjct: 878 AIHVP--------------------PRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMS 917
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCL 318
+ + + T A FY++ + GL I+ + R+R++ C+
Sbjct: 918 EENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDEIRDRLLSCM 966
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 153
E +A+ AP L S V+ T + TD PGLFS + LA ++V+A I T N
Sbjct: 720 EAEATGAP-LTVSTRVLEARSVTEVTVYVTDHPGLFSRIAGALAVAGASIVDARIHTMTN 778
Query: 154 DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL 213
RA V D + G A P +L+ + L+ L G +
Sbjct: 779 GRALDTFWVQD-AQGGAFDSPHKLARLSVLIEQALSGRLNL------------------- 818
Query: 214 HQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTL 272
D++ +V + R+ +V + N +TVI + +DRP LL D+ +
Sbjct: 819 ------DQEIRKVRREPSRLRAVQVPGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAI 872
Query: 273 TDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
++ + + T A FY++ V GL I +E + + + L AA+
Sbjct: 873 SEQGLQIASAHITTYGVRAVDVFYVKDVFGLKIENERKLASLREALLAAL 922
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVIDN+ TVI+++ ++ G+L + +++ L I A+I++ G +DVF V
Sbjct: 838 PGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPS 103
D G KI ++ + +++ L A+ P+
Sbjct: 898 KDVFGLKIENERKLASLREALL--AALGPA 925
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 30/230 (13%)
Query: 105 RSSVGVMPT----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
++S+ +M T E+ T I D P L S + A N+V+A+I+T +D A +
Sbjct: 719 KTSLSIMMTPRASEDVTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDI 778
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
+ + + + KR +KE++ L+G +PP R R++ +
Sbjct: 779 ILIKRAFDFDEDETKRARRVKEIIEQALKGTIRLPDEIARHAPP---KRTRKIFDVT--- 832
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
P V + N + + ++VI ++S DRP LL D+ TL+D+ +
Sbjct: 833 -------------------PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDI 873
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
+ T +A FY+R + G +++ + R+ L + ++ + +++
Sbjct: 874 ASAHITTFGEKAIDSFYVRDLIGHKLTNPQRQTRICHKLLSIVQTQTADI 923
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N+ +VI+V S+++ G+L + + L+D++L I A+I++ G +D F V
Sbjct: 833 PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVR 892
Query: 75 DCDGKKIRDKE 85
D G K+ + +
Sbjct: 893 DLIGHKLTNPQ 903
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P + T F +D PGLFS + LA + NVV+A +T D A + G
Sbjct: 721 PDRDATRASFAMSDHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQDADGRPF 780
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ RL +++++ + G ++ RE +RD +
Sbjct: 781 -EAARLPRLRQMIDRTMNGE--------------VVPRE------AMKERD------KIK 813
Query: 232 RVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
+ E + P + + E YT+I + ++DRP LL D+V TL + ++ T
Sbjct: 814 KRERAFTVPTLITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGE 873
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+A FY++ + GL +E R+++ L AI++ A
Sbjct: 874 QAVDTFYVKDMFGLKFHAEGRRQQLEAKLREAIKQGA 910
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 89/224 (39%), Gaps = 28/224 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 781 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 840
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P +L+ + L+ L G D K S R R +H
Sbjct: 841 FEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------- 884
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N YTVI + +DRP LL D+ ++D + + + T
Sbjct: 885 -------VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGV 937
Query: 290 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASEV 329
A FY++ + GL I+ E RE ++ L A E SE+
Sbjct: 938 RAVDVFYVKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSEI 981
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V Q ++D L I A+I++ G +DVF V
Sbjct: 886 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 945
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI D+ + I++ L
Sbjct: 946 KDLFGLKITDERRLGEIREAL 966
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D PGLFS++ ++ +V+A+I T A V + G A+ D +
Sbjct: 727 TDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGTAVTDEDK 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L + ++ N L G K + + P G+ +R R V +V
Sbjct: 787 LDRLARIIENALSGKIWLEK-ELAAKPSGLPSRTR------------------VFKVP-- 825
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V V N K YTVI + +DRP L+D+ LT + V T F
Sbjct: 826 ---PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVF 882
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y++ V G+ I E + ++V + L
Sbjct: 883 YVKDVFGMKIEHEGKLKQVRETL 905
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 5 YAKLIRRMNPPRVVIDNNTCAD----ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR ++ + C D T + + + + G+ ++ ++ + I A I
Sbjct: 700 HAELIRDAEAAGRLLTVDVCTDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKI 759
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKEVID--------------YIQQRLETDASFAPSLR 105
+ G +DVF+V D DG + D++ +D ++++ L S PS
Sbjct: 760 MTLTTGMALDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRT 819
Query: 106 SSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
V P ++ +T IE G DRPG +V A L + +A++ T +R
Sbjct: 820 RVFKVPPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVV 879
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +V D G I+ +L ++E L + L G
Sbjct: 880 DVFYVKD-VFGMKIEHEGKLKQVRETLMDTLNG 911
>gi|254465168|ref|ZP_05078579.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
gi|206686076|gb|EDZ46558.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
Length = 946
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D S G+ DP RL +
Sbjct: 761 FVMEDHPGIFARIVGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPF-DPMRLHRL 819
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
K+++ L+G R A S I RER I FD+ E
Sbjct: 820 KQMIEKTLKGEVIARDALKSRDK--IKKRERAFKVPTHITFDNEGSE------------- 864
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 865 ------------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYV 912
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL SE+++ + + L AI
Sbjct: 913 KDMFGLKYYSESKQRMLDRKLREAI 937
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 853 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYV 912
Query: 74 IDCDGKK 80
D G K
Sbjct: 913 KDMFGLK 919
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+S V V E+ I DRPGL +++C VLA + V A+I+T D V
Sbjct: 656 KSLVKVFEGEDDWKILLMSHDRPGLLAKLCGVLALHNLAVAMAQIFTWEDGVIVDVVTVR 715
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
G D + +D FR A L+ ++ +L+Q Y
Sbjct: 716 PQDGAGFSD---------------KDWDSFR-ADIDLALSHRLDLGHKLYQKW--QTTYG 757
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
R + VG ++ P+V V N D Y+V+ + + DRP LL+ + TL D ++
Sbjct: 758 RKAELVGAID-----PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAY 812
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ T + FY+ G + ++ RE ++Q L
Sbjct: 813 IATEVEQLIDVFYVLDSRGEKLLGDSLREDIVQAL 847
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRVV+DN + +V++V +V++ +L + Q L D + I KAYI+++ +DVF V+
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 75 DCDGKKI 81
D G+K+
Sbjct: 828 DSRGEKL 834
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 113 TEEH----TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHST 167
T++H T F D PG+FS + LA + NVV+A +T D A AV V DH
Sbjct: 730 TQDHDRDATRAAFVLADHPGIFSRLAGALALVGANVVDARTYTTKDGWATAVFWVQDHD- 788
Query: 168 GYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD-YERV 226
G+ +D K L +++++ L G R A S RD ++
Sbjct: 789 GHPFEDIK-LKRLEDMIHKTLSGKVIARDAMKS--------------------RDKMKKR 827
Query: 227 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
EKA + +T N D YT+I + ++DRP LL+D+ TL D + ++
Sbjct: 828 EKAF------TVPTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIA 881
Query: 286 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
T + FY++ + GL S+A+ + + + L AI + A
Sbjct: 882 TYGEQVVDTFYVKDMFGLKFFSDAKMKSLEKKLREAIVKGA 922
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNV 73
R+ + + DAT + GI ++ L V N+V + Y + DG W VF V
Sbjct: 726 RIGLTQDHDRDATRAAFVLADHPGIFSRLAGALALVGANVVDARTYTTKDG-WATAVFWV 784
Query: 74 IDCDGKKIRD---KEVIDYIQQRLETDASFAPSLRS--------SVGVMPT--------- 113
D DG D K + D I + L +++S +PT
Sbjct: 785 QDHDGHPFEDIKLKRLEDMIHKTLSGKVIARDAMKSRDKMKKREKAFTVPTNITFDNDGS 844
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ +T IE DRPGL ++ LAD H + +A I T+ ++ +V D D
Sbjct: 845 DIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFGLKFFSD 904
Query: 174 PKRLSTIKELLFNVLRG 190
K S K+L +++G
Sbjct: 905 AKMKSLEKKLREAIVKG 921
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 834 PTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + ++++L
Sbjct: 894 KDMFGLKFFSDAKMKSLEKKL 914
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 89/224 (39%), Gaps = 28/224 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 780 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 839
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P +L+ + L+ L G D K S R R +H
Sbjct: 840 FEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------- 883
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N YTVI + +DRP LL D+ ++D + + + T
Sbjct: 884 -------VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGV 936
Query: 290 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASEV 329
A FY++ + GL I+ E RE ++ L A E SE+
Sbjct: 937 RAVDVFYVKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSEI 980
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V Q ++D L I A+I++ G +DVF V
Sbjct: 885 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 944
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI D+ + I++ L
Sbjct: 945 KDLFGLKITDERRLGEIREAL 965
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
I +TG D PGLFS++ +A N+V+A+I T + A S G A P +L+
Sbjct: 731 IVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLA 789
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKS 237
+ + VL G +T L DR+ R K R
Sbjct: 790 KLSSCVEQVLSG-------RTRL------------------DRELAARKGKLPSRAHVFK 824
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P+V V N+ + +TV+ + +DRP LL+DI +T++ + ++T FY
Sbjct: 825 VPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFY 884
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIE 323
++ V G + + E++ L AA+E
Sbjct: 885 VKDVFGHKVEHGRKLEQIKAALLAALE 911
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ ++ I+ L
Sbjct: 886 KDVFGHKVEHGRKLEQIKAAL 906
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P+ HT +E G DRPGL ++ + + ++ + +A I T+ +R V +V D G+
Sbjct: 834 VPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKD-VFGHK 892
Query: 171 IKDPKRLSTIKELLFNVL 188
++ ++L IK L L
Sbjct: 893 VEHGRKLEQIKAALLAAL 910
>gi|260425574|ref|ZP_05779554.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
gi|260423514|gb|EEX16764.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
Length = 915
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 108 VGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+ + P E+ T + F +D PG+FS + L+ + NVV+A +T D A
Sbjct: 714 IDIHPDEDRDATRVCFALSDHPGIFSRLAGALSLVGANVVDARTFTSKDGYATAAFWIQD 773
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL---HQIMFDDRD 222
+ G + + RL +++++ L G + + + LS I RER I FD+
Sbjct: 774 ADG-SPYEQNRLGRLRDMIRKTLMG--EVKPREAILSKGKIKKRERAFTVPTSITFDNEG 830
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
E YT+I + ++DRP LL+D+ TL + +
Sbjct: 831 SE-------------------------IYTIIEVDTRDRPGLLYDLTRTLAETNVYIASA 865
Query: 283 MVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
++ T + FY++ + GL + ++++ + + L AA+E A +
Sbjct: 866 VIATYGEQVVDTFYVKDMFGLKFYTPSKQKTLEKRLRAAMEAGAKRI 912
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 821 PTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYV 880
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K +++RL
Sbjct: 881 KDMFGLKFYTPSKQKTLEKRL 901
>gi|399993822|ref|YP_006574062.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658377|gb|AFO92343.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 933
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D S G+ + +RL +
Sbjct: 748 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPY-EAERLPRL 806
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+E++ LRG + + S I RER + I FD+ E
Sbjct: 807 REMIHKTLRG--EVITGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 851
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 852 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRA 326
+ + GL SEA+++ + L +AI A
Sbjct: 900 KDMFGLKYYSEAKQKSLEAKLRSAIAEGA 928
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ K R N P + DN+ T+I+VD+ ++ G+L + + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 62 SDGGWFMDVFNVIDCDGKK 80
+ G +D F V D G K
Sbjct: 888 TYGEQVVDAFYVKDMFGLK 906
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D GLFS + LA +V+A I T D A + G +
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS 797
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++ P RL+ I ++ VL G RL R +EKA
Sbjct: 798 LEAPHRLAKISAVIEQVLSG---------------------RL-------RLATEIEKAA 829
Query: 231 -----GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
GR+ P+V V N + +TVI + +DRP LL D+ +T + +
Sbjct: 830 NSVVGGRMRAIHVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHI 889
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
T A FY++ V GL + +E + ++ L A+ R EV
Sbjct: 890 TTYGVRAVDVFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHEV 934
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TVI+V+ ++ G+L V + L I A+I++ G +DVF V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K++++ + ++ L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D GLFS + LA +V+A I T D A + G +
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS 797
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++ P RL+ I ++ VL G RL R +EKA
Sbjct: 798 LEAPHRLAKISAVIEQVLSG---------------------RL-------RLATEIEKAA 829
Query: 231 -----GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
GR+ P+V V N + +TVI + +DRP LL D+ +T + +
Sbjct: 830 NSVVGGRMRAIHVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHI 889
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
T A FY++ V GL + +E + ++ L A+ R EV
Sbjct: 890 TTYGVRAVDVFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHEV 934
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TVI+V+ ++ G+L V + L I A+I++ G +DVF V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K++++ + ++ L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
>gi|126734870|ref|ZP_01750616.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
gi|126715425|gb|EBA12290.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
Length = 931
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 37/212 (17%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PGLFS + LA + NVV+A +T ND A V + G + RL +
Sbjct: 745 FAMVDHPGLFSRMTGALALVGANVVDARTYTSNDGYATAVFWVQDNDGNPY-EAARLPRL 803
Query: 181 KELLFNVLRG---YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVE 234
++++ LRG D K K I RER I FD+ E
Sbjct: 804 RKMIERTLRGEVVAKDALKDKDK-----IKKRERAFKVPTNISFDNDGSE---------- 848
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
YT+I + ++DR LL+D+ TL + + ++ T +
Sbjct: 849 ---------------IYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDT 893
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
FY++ + GL SEA+R + + L AI + A
Sbjct: 894 FYVKDIVGLKYHSEAKRAGLERKLREAIAQGA 925
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGL ++ LA ++V+A I T + A ++G A
Sbjct: 749 LPARAVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQDTSGEA 808
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
P RL+ I L+ L G D + S P + R R +H
Sbjct: 809 FDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMRAIH---------------- 852
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V V N +TV+ + +DRP L+ DI + + + T
Sbjct: 853 -------VPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGV 905
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FY++ V GL + +E + ++ Q L A+
Sbjct: 906 RAVDVFYVKDVFGLKVENERKLAKLRQALLGAL 938
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 27/215 (12%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDS--VNKHGILLQVIQVLNDVNLVIKKAYISS 62
+A++IR + +D V +V + G++ ++ L I A I +
Sbjct: 730 HARMIRAAGTQLLTVDTQPLPARAVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHT 789
Query: 63 -DGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSS---------- 107
G MD F V D G+ R ++ I+Q L +R +
Sbjct: 790 MTNGMAMDTFWVQDTSGEAFDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMR 849
Query: 108 -VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ V P + HT +E G DRPGL ++ A +A + +A I T+ RA
Sbjct: 850 AIHVPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVD 909
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
V +V D G +++ ++L+ +++ L L DD
Sbjct: 910 VFYVKD-VFGLKVENERKLAKLRQALLGALTSPDD 943
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 31/227 (13%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 703 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 762
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L + L+ L G+ D + ++ G RR+ I
Sbjct: 763 FEEPQQLGRLSLLIEQALTGHIDINR---EIAQCGRRLSGRRMRAIHVP----------- 808
Query: 231 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + TV+ + +DRP LL DI L++ + + + T
Sbjct: 809 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 290 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASEV 329
A FY++ + GL I+ +R+ +Q EAA +RR+SE+
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSSEL 906
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L + L++ L I A+I++ G
Sbjct: 800 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI D+E +D I+ L +A A RSS
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSS 904
>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 291
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 85 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 144
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ + E++ + IQ E+ + A L ++ G++P +E H
Sbjct: 145 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSQLA--LGAAFGLLPPKEQVDVDIATH 202
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ ++ D++ V + E T A A HV+ +
Sbjct: 203 INISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVSYN- 261
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 262 -GKAISKP-----LQQVLANSLRYF 280
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T TG +++P
Sbjct: 96 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEP 155
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+ L I+ + N L Y ++ +L G++ + ++
Sbjct: 156 ELLEAIRLTIINNLIQYHPESSSQLALGAAFGLLPPKEQV-------------------- 195
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D + + + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 196 -DVDIATHINISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKA 254
Query: 294 EFYIRH 299
+F++ +
Sbjct: 255 KFHVSY 260
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
FT D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 734 FTMGDHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWVQDAEGHPF-EAARLPRL 792
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+++ L+G R+A S I RER + I FD+ E
Sbjct: 793 TQMIHKTLKGEVVAREALKSRDK--IKKRERAFNVPTHITFDNEGSE------------- 837
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL D + + ++ T + FY+
Sbjct: 838 ------------IYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYV 885
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASE 328
+ + GL SE++ ++ LEA + +E
Sbjct: 886 KDMFGLKYHSESK----LRGLEAKLRTAITE 912
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ K R N P + DN T+I+VD+ ++ G+L + + L D N+ I A I+
Sbjct: 814 DKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIA 873
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET 96
+ G +D F V D G K + + ++ +L T
Sbjct: 874 TYGEQVVDTFYVKDMFGLKYHSESKLRGLEAKLRT 908
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 39 GILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDG---KKIRDKEVIDYIQQR 93
GI ++ L V N+V ++Y + DG + D F V D +G + R + I +
Sbjct: 741 GIFARIAGALALVGANVVDARSYTTKDG-YVTDAFWVQDAEGHPFEAARLPRLTQMIHKT 799
Query: 94 LETDASFAPSLRSSVGV--------MPT---------EEHTSIEFTGTDRPGLFSEVCAV 136
L+ + +L+S + +PT E +T IE DRPGL ++
Sbjct: 800 LKGEVVAREALKSRDKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRT 859
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTD 164
LAD + + NA I T+ ++ +V D
Sbjct: 860 LADANVYIANAVIATYGEQVVDTFYVKD 887
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+E T + D PGLFS + +A C+++NA I T +D + D + I+D
Sbjct: 764 KESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGT-----ILDQ---FRIQD 815
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAK-TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
R + I + N R AK S G ++ RRL ER + R
Sbjct: 816 KDRQAVIDPQIQN--------RIAKIIEQSLAGDISLFRRLQ---------ERSAQITKR 858
Query: 233 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
+ S P+V V N + +TVI + DRP LL+ I L + + V+T +
Sbjct: 859 QKAMSVPPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKV 918
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCL 318
FY++ V GL I EA ++++ Q L
Sbjct: 919 VDVFYVKDVYGLKIEREASQKKIEQTL 945
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++ NN TVI+V+ ++ G+L Q+ L + L I A +S+ G +DVF V
Sbjct: 865 PPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYV 924
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI + I+Q L
Sbjct: 925 KDVYGLKIEREASQKKIEQTL 945
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 5 YAKLIRRMNP--PRVVIDNNTCAD--ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+L + N +++ID D +T++ V + + G+ +++ + I A I
Sbjct: 740 HARLAEQFNAGEKKLLIDFKIDDDKESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARI 799
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLR---------- 105
++ G +D F + D D + + D ++ + I+Q L D S L+
Sbjct: 800 NTRHDGTILDQFRIQDKDRQAVIDPQIQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQ 859
Query: 106 SSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
++ V P + HT IE G DRPGL ++ L L + +A + T+ ++
Sbjct: 860 KAMSVPPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVV 919
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +V D G I+ I++ L V
Sbjct: 920 DVFYVKD-VYGLKIEREASQKKIEQTLMGVF 949
>gi|254507884|ref|ZP_05120014.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
gi|219549257|gb|EED26252.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
Length = 711
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 517 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 576
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ + R K VI ++ L+ P ++++ V +PT+ +
Sbjct: 577 LDQHGEVVDESRHKAVIKHLTHVLQDGRPTKIKTRRVPRNLQHFTVKTQVDFLPTKSKKR 636
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADLH ++ A+I T +RA + +T + G
Sbjct: 637 TLMEFVALDTPGLLATVGATFADLHVHLHAAKITTIGERAEDLFIITSENGG 688
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 83 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 142
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ A A L ++ G++P +E +E
Sbjct: 143 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLA--LGAAFGLVPPKEQVDVEIATQ 200
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ + D++ V + E T A A HV
Sbjct: 201 ITISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKFHVN--- 257
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
KD + ++ +L N LR + R+ +T
Sbjct: 258 ----YKDKALIKPLQLVLVNSLRYF--LRRPET 284
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L +L NVV A ++ + +T +G ++DP+
Sbjct: 96 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 155
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ + N + Y A+ +L G++ + ++ VE A
Sbjct: 156 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPKEQVD-----------VEIAT----- 199
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
Q+T+ + +++ + + DRP LL D+V T+TD+ V G +T A +F
Sbjct: 200 -----QITISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKF 254
Query: 296 YIRHVD 301
++ + D
Sbjct: 255 HVNYKD 260
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIK 172
+++T+I D P L S++C VLA N+ +A+I+T D +VTD T I
Sbjct: 667 DDYTNITIITKDFPALLSKLCGVLAINDANIHDAKIFTRKDGIVIDTFNVTDFRTHKKI- 725
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
DP + I+ L L GY + K + L +R +RL Q +F
Sbjct: 726 DPSKYQKIENDLTKALTGYLEVNKEVSMLK-----SRWKRLEQKLF-------------- 766
Query: 233 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
+S + +V+ N E+ YT+I + S DR L+ I ++++ V+ ++T +
Sbjct: 767 --KRSGQVKVSFDNHER-YTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIV 823
Query: 293 QEFYIRHVDGLPISSEAE---RERVIQCLE 319
FY+ + G IS + +E +I +E
Sbjct: 824 DSFYVLNQSGKKISPSDQAFIKEELINTIE 853
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 7 KLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
KL +R +V DN+ T+I V S ++ G L + + ++++ LVI A IS+ G
Sbjct: 764 KLFKRSGQVKVSFDNH--ERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDD 821
Query: 67 FMDVFNVIDCDGKKIR-------DKEVIDYIQQRL 94
+D F V++ GKKI +E+I+ I+Q L
Sbjct: 822 IVDSFYVLNQSGKKISPSDQAFIKEELINTIEQIL 856
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 41/232 (17%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 746 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 805
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L+ + L+ L G+ + +NRE + +
Sbjct: 806 FEEPQQLARLSLLVEQALTGHLN-------------INRE---------------IAQCG 837
Query: 231 GRVEDKSSR-----PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
RV + R P+V + N + TV+ + +DRP LL D+ L++ + + +
Sbjct: 838 RRVSGRRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHI 897
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASEV 329
T A FY++ + GL I+ + +R+ +Q EAA +RR+SE+
Sbjct: 898 TTYGVRAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSSEL 949
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 843 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 902
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI DK +D I+ L +A A RSS
Sbjct: 903 RAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSS 947
>gi|400755337|ref|YP_006563705.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
gi|398654490|gb|AFO88460.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
Length = 933
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D S G+ + +RL +
Sbjct: 748 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPY-EAERLPRL 806
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+E++ L+G + + S I RER + I FD+ E
Sbjct: 807 REMIHKTLKG--EVITGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 851
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 852 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRA 326
+ + GL SEA+++ + L +AI A
Sbjct: 900 KDMFGLKYYSEAKQKSLEAKLRSAIAEGA 928
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ K R N P + DN+ T+I+VD+ ++ G+L + + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 62 SDGGWFMDVFNVIDCDGKK 80
+ G +D F V D G K
Sbjct: 888 TYGEQVVDAFYVKDMFGLK 906
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 39/234 (16%)
Query: 100 FAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
FA LR + + P E+ T + F D PG+FS +C L+ + NVV+A +T
Sbjct: 723 FAQMLRGLGNDEVRINLTPDEDRDATRVCFAMADHPGIFSRMCGALSLVGANVVDARTFT 782
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
D A S G +D RL ++E++ L+G R A + RE+
Sbjct: 783 SKDGFATAAFWVQDSEGTPYEDI-RLPRLREVIERTLKGEVVARDALAGKDK--VKKREK 839
Query: 212 RLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDI 268
I FD+ E YT+I + ++DRP LL D+
Sbjct: 840 AFRVKTSITFDNEGSE-------------------------IYTIIEVDTRDRPGLLHDL 874
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
TL + + ++ T + FY++ + GL ++ +R+ + L AI
Sbjct: 875 TRTLANNNVYIASAVIATYGEQVVDTFYVKDMFGLKYHAQGKRDALENKLHEAI 928
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + DATV+++ ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ + A + ++ G++P +E H
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLA--MGAAFGLLPPKEQVDVDIATH 204
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ + D+ V + E T A A HV+
Sbjct: 205 INISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS--Y 262
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 263 KGKAISKP-----LQQVLANSLRYF 282
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + DATV+++ ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ + A + ++ G++P +E H
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLA--MGAAFGLLPPKEQVDVDIATH 204
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ + D+ V + E T A A HV+
Sbjct: 205 INISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS--Y 262
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 263 KGKAISKP-----LQQVLANSLRYF 282
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V ID ++ +ATV++V ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E ++ I+ + E+ A A + + G++P +E ++ +
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLA--MGEAFGIVPPKEKPDVDISTR 217
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL E+ L+D+ V + E T A A HV+
Sbjct: 218 IHIYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYR- 276
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G A+ P +++++ N LR +
Sbjct: 277 -GSALIKP-----LQQVVANSLRYF 295
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ + N L Y A+ ++ GI+ + + D D R+
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEK------PDVDIST------RIHI 220
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P ++L+IE + DRP LL +IV TL+D+ V G +T A +F
Sbjct: 221 YDDGPNRSLLSIE---------TADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKF 271
Query: 296 YIRH 299
++ +
Sbjct: 272 HVSY 275
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + F D PG+F+ + LA + NVV+A +T D + G D R
Sbjct: 754 TRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDADGKPY-DESR 812
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 233
L +++++ L G + ++ +S + R+ + I FD+ E
Sbjct: 813 LPRLRKMIDKTLSG--EVVTSQALVSKDKVKKRDAQFRFPTSISFDNEGSE--------- 861
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
YT+I + ++DRP LLFD+ L D V + T +
Sbjct: 862 ----------------IYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVD 905
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
FY++ + GL + EA++ + + L A+E A
Sbjct: 906 TFYVKDMFGLKLHGEAKQRTIEKRLREAVEHGA 938
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L D N+ + A I++ G +D F V
Sbjct: 850 PTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYV 909
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + I++RL
Sbjct: 910 KDMFGLKLHGEAKQRTIEKRL 930
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVD-SVNKH-GILLQVIQVLNDV--NLVIKKAYIS 61
A L+R + +V +D AD V +V ++ H GI ++ L V N+V + Y +
Sbjct: 730 AHLLRGIEDDQVRLDLTLDADRDVTRVSFAMADHPGIFARLAGALALVGANVVDARTYTT 789
Query: 62 SDGGWFMDVFNVIDCDGK-----------KIRDK----EVI--------DYIQQRLETDA 98
DG + F V D DGK K+ DK EV+ D +++R DA
Sbjct: 790 KDG-YVTACFWVQDADGKPYDESRLPRLRKMIDKTLSGEVVTSQALVSKDKVKKR---DA 845
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
F S +E +T IE DRPGL ++ LAD + V +A+I T+ +
Sbjct: 846 QFRFPTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVD 905
Query: 159 VVHVTD 164
+V D
Sbjct: 906 TFYVKD 911
>gi|297844622|ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
gi|297336034|gb|EFH66451.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ ++S ++ ++ GV+P E H +
Sbjct: 144 KADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
IE G DRPGL E+ +++D+ V + E T A HV+
Sbjct: 204 IEDDGPNRSLLYIETADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS----- 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
++ + ++++L N LR +
Sbjct: 259 --YRNKALIKPLQQVLANSLRYF 279
>gi|84499734|ref|ZP_00998022.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
gi|84392878|gb|EAQ05089.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
Length = 919
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A + G+ + R+ +
Sbjct: 734 FAMEDHPGIFSRLAGALALVGANVVDARTFTSKDGYATAAFWIQDADGHPY-ESARIPRL 792
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++++ L+G R+A S I RER RV A+ + S
Sbjct: 793 RQMILKTLKGEVVPREAMKSRDK--IKKRERAF-----------RVSTAISFDNEGS--- 836
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
+ +T+I + ++DRP LLFD+ TL + ++ T + FY++ +
Sbjct: 837 --------EIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDM 888
Query: 301 DGLPISSEAERERVIQCLEAAIERRASE 328
GL + SE ++ + LEA + SE
Sbjct: 889 FGLKLYSETKQ----KALEAKLREAISE 912
>gi|189218779|ref|YP_001939420.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
gi|189185637|gb|ACD82822.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
Length = 908
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYA 170
P +H+ + DR G+FS +C A + ++++A+I T D V V YA
Sbjct: 719 PEFDHSEVIIVTWDRLGVFSRICGSFAVVGLSILSADIHTRTDGIVLDVFKVCTSRKEYA 778
Query: 171 IKDPKRLSTIKELLFNVL-RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
++ + S K L L YD F + + PGIM + +++E
Sbjct: 779 CREQYKDSFCKVLEEAFLDESYDIFSR----IPKPGIMEK-----------KEFEGEFPT 823
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
+ + +SS K+YT++ +++ D+P LL+ I L D+ + + T +
Sbjct: 824 SIQFDQQSS----------KNYTILDIQTPDKPALLYRIANALLDLGIEIVSARIATEKG 873
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FYI + G ++ E E + +++ L AI
Sbjct: 874 AALDTFYILNSSGNKVTKETEIKEILKNLRKAI 906
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 41/81 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + D + + T++ + + +K +L ++ L D+ + I A I+++ G +D F +
Sbjct: 822 PTSIQFDQQSSKNYTILDIQTPDKPALLYRIANALLDLGIEIVSARIATEKGAALDTFYI 881
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
++ G K+ + I I + L
Sbjct: 882 LNSSGNKVTKETEIKEILKNL 902
>gi|312883806|ref|ZP_07743525.1| PII uridylyl-transferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368555|gb|EFP96088.1| PII uridylyl-transferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 877
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T + V S ++ + +V+ LN NL + A + +S G+ +D F V
Sbjct: 677 PLVLVSKNATRGGTEVFVYSKDQQALFARVVAELNRRNLNVHDAQVMTSKDGFILDTFMV 736
Query: 74 IDCDGKKI---RDKEVIDYIQQRL------ETDASFAPS------LRSSVGVMPT--EEH 116
+D GK + R + ++ I + L + A AP +++ +PT ++H
Sbjct: 737 LDNKGKALEANRQQTIVKNITKALADSKPLKIKARRAPKNLQHFKVKTRAEFLPTKHQKH 796
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ +EF D PGL +++ A ++L ++ A+I T +RA + +T G
Sbjct: 797 SLLEFIALDTPGLLAKIGATFSELGIHLHAAKITTIGERAEDLFIITGEEKG 848
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV +DN TVI+V+ +++ G+L V ++D+NL I+ A+IS+ G +DVF V
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G KI + I+ I+ RL+
Sbjct: 896 DLIGTKITSETRIERIEVRLK 916
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
FA R SV + + T IE G DRPGL S+V ++DL+ ++ +A I T+ ++ V
Sbjct: 832 FAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDV 891
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
+VTD G I R+ I+ L V F + +S P +M+ +R
Sbjct: 892 FYVTD-LIGTKITSETRIERIEVRLKRV------FESPEGEMSSPVVMSSQR 936
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 35/205 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T I D P L S + A N+ +A+I+T +D A V
Sbjct: 737 EVTEIMVLAPDHPRLLSLIAGACAGTGANIADAQIFTMSDGRALDV-------------- 782
Query: 175 KRLSTIKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+L N R + D+ R+A+ + G + + R + + +R R
Sbjct: 783 --------MLLN--REFESDEDEIRRAERICANIGKLLQGREMPASLLANRRPPR----- 827
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
E + +P+V+V N + TVI + DRP LL D+ ++D+ + ++T
Sbjct: 828 -STELFAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGE 886
Query: 290 EAYQEFYIRHVDGLPISSEAERERV 314
+ FY+ + G I+SE ER+
Sbjct: 887 KVVDVFYVTDLIGTKITSETRIERI 911
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 854 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI DKE +D ++ L +A A RSS
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSS 958
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 31/227 (13%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 757 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 816
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L + L+ L G+ + + ++ G RR+ I
Sbjct: 817 FEEPQQLGRLSLLIEQALTGHLNINR---EIAQCGRRLSGRRMRAIHVP----------- 862
Query: 231 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + TV+ + +DRP LL D+ L++ + + + T
Sbjct: 863 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 290 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASEV 329
A FY++ + GL I+ + +RV +Q EAA +RR+SE+
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSSEL 960
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+PGL E+ A L +LHCNVV AE+WTHND+A VVHVT+
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTN 892
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I +D PGLFS++ +A N+V+A+I T + A S G A P +
Sbjct: 726 TEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESDGAAFDTPSK 785
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L+ + ++ VL G ++ D R K R
Sbjct: 786 LAKLSTVIEQVLSG------------------------RMRLDKELAARKGKLPARAHVF 821
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N +T+I + +DRP LL+D+ +T + + ++T F
Sbjct: 822 KVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVF 881
Query: 296 YIRHVDGLPISSEAERERV 314
Y++ + GL + E + E++
Sbjct: 882 YVKDIFGLKVQHERKLEQI 900
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN + T+I+V+ ++ G+L + + + L I A+IS+ G +DVF V
Sbjct: 824 PPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV 883
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D G K++ + ++ I+
Sbjct: 884 KDIFGLKVQHERKLEQIR 901
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 5 YAKLIR----RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVL--NDVNLVIKKA 58
+A+L+R R P V ++ T I V + + G+ Q+ + + N+V K
Sbjct: 699 HARLVRDAEQRHAPLTVESRIDSFRSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAK- 757
Query: 59 YISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVGVMP-- 112
++ G +D F + + DG + ++ I+Q L L + G +P
Sbjct: 758 IVTLANGMALDSFWIQESDGAAFDTPSKLAKLSTVIEQVLSGRMRLDKELAARKGKLPAR 817
Query: 113 ----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ HT IE G DRPGL ++ A + L + +A I T+ +R
Sbjct: 818 AHVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERV 877
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G ++ ++L I++ + LR
Sbjct: 878 VDVFYVKD-IFGLKVQHERKLEQIRDGVLKALR 909
>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max]
gi|255644481|gb|ACU22744.1| unknown [Glycine max]
Length = 294
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 88 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 147
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ + E++ + IQ E+ + A L ++ G++P +E ++
Sbjct: 148 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSRLA--LGAAFGLLPPKEQVDVDIATH 205
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV+ +
Sbjct: 206 INISDDCPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVSYN- 264
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 265 -GKAISKP-----LQQVLANSLRYF 283
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 101 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 708 AEAVRAPLTVEPRVDSHRAVTEIIVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 766
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A S G A P +L+ + + VL G +T L
Sbjct: 767 MALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSG-------RTRL-------------- 805
Query: 216 IMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLT 273
DR+ R K R P+V V N+ + +TV+ + +DRP LL+DI +T
Sbjct: 806 ----DRELAARKGKLPSRAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMT 861
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
++ + ++T FY++ V G I + +++ L AA+E A++
Sbjct: 862 NVGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLDQIKAALLAALEDPAAKA 917
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI +D I+ L
Sbjct: 886 KDVFGHKIEHGRKLDQIKAAL 906
>gi|255564051|ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
gi|223537746|gb|EEF39366.1| amino acid binding protein, putative [Ricinus communis]
Length = 282
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 76 PKVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSIT 135
Query: 75 DCD-GKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ I Q E+ + A + + GV P ++ H
Sbjct: 136 KADTGRKVEDPELLEAIRLTIINNLLQYHPESSSQLA--MGVAFGVEPPKQQVDVDIATH 193
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
S+ G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 194 ISVYDDGPDRSLLFVETADRPGLLVDLVKIITDINVAVDSGEFDTEGLLAKAKFHVS--Y 251
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 252 KGKAIIKP-----LQQVLANSLRYF 271
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 84 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSIT 143
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ A A L ++ G++ +E +E
Sbjct: 144 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLA--LGAAFGLVTPKEQVDVEIATH 201
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV
Sbjct: 202 ITISDDGPKRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVN--- 258
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
KD + ++++L N LR +
Sbjct: 259 ----YKDKALIKPLQQVLVNSLRYF 279
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L +L NVV A ++ + +T +G ++DP+
Sbjct: 97 TVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 156
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSL-------SPPGIMNRERRLHQIMFDDRDYERVEKA 229
L I+ + N + Y A+ +L +P ++ E H + DD
Sbjct: 157 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPKEQVDVEIATHITISDD--------- 207
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+ ++L +E + DRP LL D+V +TD+ V G +T
Sbjct: 208 ---------GPKRSLLYVE---------TADRPGLLVDLVKIITDINIAVESGEFDTEGL 249
Query: 290 EAYQEFYIRHVD 301
A +F++ + D
Sbjct: 250 LAKAKFHVNYKD 261
>gi|18394414|ref|NP_564010.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|9802776|gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana]
gi|14423502|gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana]
gi|30023784|gb|AAP13425.1| At1g16880 [Arabidopsis thaliana]
gi|332191392|gb|AEE29513.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|347949478|gb|AEP31952.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 290
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ ++S ++ ++ GV+P E H +
Sbjct: 144 RADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
IE G DRPGL E+ +++D+ V + E T A HV+
Sbjct: 204 IEDDGPDRSLLFIESADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS----- 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
++ + ++++L N LR +
Sbjct: 259 --YRNKALIKPLQQVLANSLRYF 279
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 101 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 709 AEAVRAPLTVEPRVDSHRAVTEIVVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 767
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A S G A P +L+ + + VL G R R
Sbjct: 768 MALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSG------------------RAR---- 805
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
D R K R P+V V N + +TV+ + +DRP LL+DI +T+
Sbjct: 806 --LDRELAARKGKLPSRAHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTN 863
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + ++T FY++ V G I + E++ L AA+E
Sbjct: 864 VGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLEQIKAALLAALE 912
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 827 PPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 886
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
D G KI ++ I+ L A P+ R++ G E
Sbjct: 887 KDVFGHKIEHGRKLEQIKAAL-LAALEDPAARTAAGTKAAE 926
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCADA---TVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T D+ T I + + ++H + V++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIRETTQRDSEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-------------------KEVIDYIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + +E I +R+ +F+P +
Sbjct: 749 YIVLDTDGGSIGNNPARIAQIRGGLIEALKHPEEYPSIINRRVTRQLKHFAFSPQVNIYT 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
M + + IE T DRPGL + V + D +V+NA+I T +R V +VTD + G
Sbjct: 809 DTMRSA--SLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTD-ADG 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S ++ L L
Sbjct: 866 RPLADPGLCSALQHALIKQL 885
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 33/198 (16%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI- 171
+E T I D+ F+ AV+ L+ N+ +A I T + ++ + G +I
Sbjct: 701 SEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIG 760
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKA 229
+P R++ I+ L L+ +++ P I+NR R+L F
Sbjct: 761 NNPARIAQIRGGLIEALKHPEEY---------PSIINRRVTRQLKHFAFS---------- 801
Query: 230 VGRVEDKSSRPQVTVL-NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
PQV + + + ++I + + DRP LL + D V + + T
Sbjct: 802 ----------PQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLG 851
Query: 289 TEAYQEFYIRHVDGLPIS 306
FY+ DG P++
Sbjct: 852 ERVEDVFYVTDADGRPLA 869
>gi|242084772|ref|XP_002442811.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
gi|241943504|gb|EES16649.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
Length = 273
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 128
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFTG---- 123
G+K+ D ++++ I+ + ++S ++ G+ P E+ ++
Sbjct: 129 RS-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKAVVDIATRIVI 187
Query: 124 --------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNVDVESAEIDTEGLVAKDKFHVS------ 241
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 242 -YRGAKLNSSLSQALINCLRYY--LRRPET 268
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCD 77
+ID ++ DAT++++ ++ G LL ++ L D+ L + K +S+D F+++
Sbjct: 1 LIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIMRL- 59
Query: 78 GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSIEFT 122
G+K+ D ++++ I+ + ++S ++ G+ E H +E
Sbjct: 60 GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDD 119
Query: 123 G----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
G DRPGL EV ++ D++C+V +AEI T A HV + +
Sbjct: 120 GPKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEGLVAKDKFHV-------SYR 172
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKT 199
K S++ ++L N LR Y R+ +T
Sbjct: 173 GAKLNSSLSQVLVNCLRYY--LRRPET 197
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 38/215 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T ++ + DR G + L DL +V + T + H+ G ++DP
Sbjct: 11 TIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIM--RLGRKVEDPDM 68
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSL-------SPPGIMNRERRLHQIMFDDRDYERVEKA 229
L TI+ + N L Y K ++ +P ++ E H I+ DD
Sbjct: 69 LETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDDG-------- 120
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+ ++L IE + DRP LL +++ +TD+ V ++T
Sbjct: 121 ----------PKRSMLYIE---------TADRPGLLLEVIKIITDVNCDVESAEIDTEGL 161
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
A +F++ + G ++S + ++ CL + R
Sbjct: 162 VAKDKFHVSY-RGAKLNSSLS-QVLVNCLRYYLRR 194
>gi|356575488|ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 282
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ N+ G LL ++ L D+ L + K +S++G F +
Sbjct: 76 PIVLIDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 135
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASF---APS------LRSSVG 109
D G+K+ D ++++ I+ + L F AP +++ +
Sbjct: 136 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 195
Query: 110 VMPTEEHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V S+ + T DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS--YGG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 254 AALN-----SSMSQVLVNCLRYY 271
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V ID ++ +ATV++V ++ G LL + L D+ L + KA + D + F++
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E ++ I+ + E+ A A + + G++P +E ++ +
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLA--MGEAFGIVPPKEKPDVDISTR 217
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL E+ L+D+ V + E T A A HV+
Sbjct: 218 IHIYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYR- 276
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G A+ P +++++ N LR +
Sbjct: 277 -GSALIKP-----LQQVVANSLRYF 295
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ + N L Y A+ ++ GI+ + + D D R+
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEK------PDVDIST------RIHI 220
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P ++L+IE + DRP LL +IV TL+D+ V G +T A +F
Sbjct: 221 YDDGPNRSLLSIE---------TADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKF 271
Query: 296 YIRH 299
++ +
Sbjct: 272 HVSY 275
>gi|343513795|ref|ZP_08750890.1| PII uridylyl-transferase [Vibrio sp. N418]
gi|342801414|gb|EGU36880.1| PII uridylyl-transferase [Vibrio sp. N418]
Length = 874
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETD------ASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P ++++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFTVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 STGYAIKDPKRL 177
G + K L
Sbjct: 848 EGGKLSEQEKSL 859
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F TD G+FS + LA + NVV+A +T D A V + G + RL +
Sbjct: 754 FALTDHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQDNDGNPFEQA-RLPRL 812
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++++ +LRG R+A D RD + + E K P
Sbjct: 813 RQMIDKILRGEMGARQA--------------------LDSRD------KIKKRESKFRVP 846
Query: 241 QVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
+ E +T+I + ++DRP LL+D+ L + + T + FY++
Sbjct: 847 TSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVK 906
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRA 326
+ G+ SE++R + + L AI++ A
Sbjct: 907 DMFGMKFHSESKRRTLEKKLREAIDQGA 934
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + +VL N+ I A I++ G +DVF V
Sbjct: 846 PTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYV 905
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + ++++L
Sbjct: 906 KDMFGMKFHSESKRRTLEKKL 926
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 96 TDASFAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
T A FA LR + + P +H T F +D PG+FS + LA + NVV+A
Sbjct: 701 THAIFAEMLRGLGDDEIRIDLDPDLDHDATRAAFALSDHPGIFSRLAGALALVGANVVDA 760
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+T D A V S G+ + K L ++ ++ L+G R A
Sbjct: 761 RTYTSKDGYATAVFWVQDSEGHPYEATK-LPRLRGMIEKTLKGEVVARDA---------- 809
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLF 266
DRD +++K R + +T N D YT++ + ++DRP LL+
Sbjct: 810 ----------LKDRD--KIKK---REREFRFPTHITFDNEGSDIYTIVEVDTRDRPGLLY 854
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
D+ L + ++ T + FY++ + GL + S +E + + L AI R A
Sbjct: 855 DLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFGLKLHSGQRQESLEKRLRDAIIRGA 914
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+++VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 826 PTHITFDNEGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + +++RL
Sbjct: 886 KDMFGLKLHSGQRQESLEKRL 906
>gi|346994787|ref|ZP_08862859.1| PII uridylyl-transferase [Ruegeria sp. TW15]
Length = 939
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 35/214 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D + G+ + RL +
Sbjct: 754 FAMGDHPGIFSRIAGALALVGANVVDARSYTTKDGYVTDAFWIQDAEGHPF-EASRLPRL 812
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+++ L+G R A S I RER + + FD+ E
Sbjct: 813 TQMIHKTLKGEVVARDALKSRDK--IKKRERAFNVPTHVTFDNEGSE------------- 857
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 858 ------------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYV 905
Query: 298 RHVDGLPISSEAERERVIQCLEAAI----ERRAS 327
+ + GL SEA++ + L AI ER AS
Sbjct: 906 KDMFGLKYHSEAKQRGLEAKLRKAIVEGAERAAS 939
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ K R N P V DN T+I+VD+ ++ G+L + + L N+ I A I+
Sbjct: 834 DKIKKRERAFNVPTHVTFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIA 893
Query: 62 SDGGWFMDVFNVIDCDGKK 80
+ G +D F V D G K
Sbjct: 894 TYGEQVVDTFYVKDMFGLK 912
>gi|242039737|ref|XP_002467263.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
gi|241921117|gb|EER94261.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
Length = 280
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 75 PKVIIDQDSDPDATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSIT 134
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASFAPS---------LRSSVG 109
G+KI D E+++ I+ +L A+F P + + +
Sbjct: 135 KASTGRKIDDPELLEAIRLTIINNMLVYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 194
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ E + + DRPGL ++ +++D++ NV + E T A A HV+
Sbjct: 195 IYDGPERSLLVVETADRPGLLVDLVKIISDININVQSGEFDTEGLLAKAKFHVS------ 248
Query: 170 AIKDPKRLSTIKELLFNVLRGY 191
+ + +K++L N LR +
Sbjct: 249 -YRGKPLMEALKQVLSNSLRYF 269
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A + + +T STG I DP
Sbjct: 86 DATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSITKASTGRKIDDP 145
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
+ L I+ + N + Y ++ ++ + E V+ +
Sbjct: 146 ELLEAIRLTIINNMLVYHPESSSQLAMG------------ATFGPEAPTEEVDVDIATHI 193
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
D P+ ++L +E + DRP LL D+V ++D+ V G +T A +
Sbjct: 194 DIYDGPERSLLVVE---------TADRPGLLVDLVKIISDININVQSGEFDTEGLLAKAK 244
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F++ + G P+ EA ++ + L + R +E
Sbjct: 245 FHVSY-RGKPL-MEALKQVLSNSLRYFLRRPTTE 276
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TV++++ ++ G+L + ++D L I A+I++ G +DVF V
Sbjct: 849 PPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK ++ I+Q L
Sbjct: 909 KDLFGLKITDKARLETIRQTL 929
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 25/231 (10%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E++A +P L +P T + D PGLFS + +A ++V+A I T +
Sbjct: 729 ESEARHSP-LTVESQPIPARGVTEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTN 787
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + G A ++P++L+ + L+ L G + K S G R R +H
Sbjct: 788 GMALDTLWVQDADGAAFEEPQQLARLSMLVEQALSGQLNISKEIASCGRRGSGRRMRAIH 847
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLT 273
P+V + N + TV+ + +DRP LL DI T++
Sbjct: 848 -----------------------VPPRVVIDNRASNACTVVEINGRDRPGLLHDITATIS 884
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
D + + + T A FY++ + GL I+ +A E + Q L A +++
Sbjct: 885 DQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKARLETIRQTLLAGLQK 935
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHS-TGYAIKDPKR 176
I F DRPG+FS + VLA NVV A I+T D + T H+ +A++ K+
Sbjct: 696 ITFMSKDRPGIFSRMAGVLAINRINVVAANIYTWGDGTVVDIFKATPHADRHHALEVWKK 755
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ E +V RG + +DR E+ + ++ E K
Sbjct: 756 VQKDAE---DVFRG------------------------NLSLEDRLKEKAKPSILDSEYK 788
Query: 237 SSR-PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P++ V N D+ T+I + + +R LL+DI TL ++ + + T +
Sbjct: 789 PSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADV 848
Query: 295 FYIRHVDGLPISSEAERERVIQCL 318
FY+R ++G + E E R+++ L
Sbjct: 849 FYVRDLEGQKVEDEKETARIVETL 872
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D EY + + P+++++N T+I+V + N+ G+L + + L ++ L I+ A I
Sbjct: 783 LDSEY----KPSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKI 838
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKE 85
++ DVF V D +G+K+ D++
Sbjct: 839 ATKADQVADVFYVRDLEGQKVEDEK 863
>gi|114764208|ref|ZP_01443446.1| PII uridylyl-transferase [Pelagibaca bermudensis HTCC2601]
gi|114543360|gb|EAU46376.1| PII uridylyl-transferase [Roseovarius sp. HTCC2601]
Length = 915
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 43/272 (15%)
Query: 73 VIDCDGKKIRDKEVIDY--IQQRLETDAS--FAPSLRS------SVGVMPTEEH--TSIE 120
+ D D K +R + Y Q L A FA LR + + P E+ T +
Sbjct: 669 LADWDAKDLRAETARHYDPYWQGLHVTAHKVFAELLRDIGDTEIRIDIHPDEDRDATRVC 728
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + L+ + NVV+A +T D A S G ++ R+ +
Sbjct: 729 FALADHPGIFARLAGALSLVGANVVDARTFTSKDGYATAAFWIQDSEGSPYEE-SRIPRL 787
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++ + L G + + + LS + RE+ + I FD+ E
Sbjct: 788 RDTIRKTLMG--EVKPREAILSRGKLKKREKAFNVPTSIAFDNEGSE------------- 832
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL++ + ++ T + FY+
Sbjct: 833 ------------IYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYV 880
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEV 329
+ + GL + ++++ + + L AA+E A+ +
Sbjct: 881 KDMFGLKFYTPSKQKTLERRLRAAMEDGAARI 912
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 821 PTSIAFDNEGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYV 880
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K +++RL
Sbjct: 881 KDMFGLKFYTPSKQKTLERRL 901
>gi|293334853|ref|NP_001169848.1| uncharacterized protein LOC100383740 [Zea mays]
gi|224031989|gb|ACN35070.1| unknown [Zea mays]
gi|414882134|tpg|DAA59265.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 270
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 238
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 239 -YRGGKLNSSLSQALTNCLRYY--LRRPET 265
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T ++ A + + G+ I D R + E
Sbjct: 723 DVPGLFSMITGVMAANGINILGAQIHTSSNGKALDILQVNSPQGFIITDVGRWKRVNE-- 780
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
D R+ T +P + +R+ ++ EKA R S+R ++
Sbjct: 781 --------DLRQVLTGKTPVASLVAKRQRPTLL--------AEKAKPRF---SARVEIDN 821
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
+ DYTVI + + D+ +L+ I TLT++ + ++T + FY++ + G
Sbjct: 822 -EVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKDIFGHK 880
Query: 305 ISS----EAERERVIQCLE 319
I++ E RER+++ +E
Sbjct: 881 ITNPERLEEIRERLLKAVE 899
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
RV IDN +D TVI + + +K GIL Q+ L ++ L I + IS+ DVF V
Sbjct: 815 ARVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVK 874
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ++ I++RL
Sbjct: 875 DIFGHKITNPERLEEIRERL 894
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L+++ L I A IS+ G +DVF V
Sbjct: 840 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYV 899
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 900 KDVFGLKVTHEGKLAKIKERL 920
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 37/213 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + TD GLFS + LA ++V+A I+T + A V + G A + +
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGAFESSDK 801
Query: 177 LSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKA 229
L+ + ++ VL G +D +TS + +R R H +++ D+
Sbjct: 802 LAKLSVMIEKVLSGQLKPLNDLATRRTSHA-----SRTRVFHVPPRVLIDN--------- 847
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
N +TVI + +DRP LL+D+ L+++ + ++T
Sbjct: 848 ----------------NASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGE 891
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+A FY++ V GL ++ E + ++ + L +A+
Sbjct: 892 KAIDVFYVKDVFGLKVTHEGKLAKIKERLLSAL 924
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L++L + +A+I T ++A V +V D G +
Sbjct: 853 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKD-VFGLKVTHEG 911
Query: 176 RLSTIKELLFNVL 188
+L+ IKE L + L
Sbjct: 912 KLAKIKERLLSAL 924
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L ++ L I A IS+ G +DVF V
Sbjct: 846 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 905
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 906 KDVFGLKVTHESKLAQIRERL 926
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 175
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 747 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 806
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L+ + ++ VL G L P LH + +R R
Sbjct: 807 KLAKLSVMIEKVLSG---------QLKP---------LHDLT------KRKAPHASRTRV 842
Query: 236 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P+V + N +TVI + +DRP LL+D+ LT++ + ++T +A
Sbjct: 843 FHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDV 902
Query: 295 FYIRHVDGLPISSEAE----RERVIQCL 318
FY++ V GL ++ E++ RER++ L
Sbjct: 903 FYVKDVFGLKVTHESKLAQIRERLLHAL 930
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 859 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHES 917
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L + L
Sbjct: 918 KLAQIRERLLHAL 930
>gi|343509231|ref|ZP_08746516.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
gi|342805298|gb|EGU40574.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
Length = 874
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETD------ASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 STGYAIKDPKRL 177
G + K L
Sbjct: 848 EGGKLSEQEKSL 859
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L ++ L I A IS+ G +DVF V
Sbjct: 844 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 904 KDVFGLKVTHENKLAQIRERL 924
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 175
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 745 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 804
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L+ + ++ VL G L P LH + +R R
Sbjct: 805 KLAKLSVMIEKVLSG---------QLKP---------LHDLT------KRKAPHASRTRV 840
Query: 236 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P+V + N +TVI + +DRP LL+D+ LT++ + ++T +A
Sbjct: 841 FHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDV 900
Query: 295 FYIRHVDGLPISSEAE----RERVIQCL 318
FY++ V GL ++ E + RER++ L
Sbjct: 901 FYVKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 857 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHEN 915
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L + L
Sbjct: 916 KLAQIRERLLHAL 928
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ IDN AT ++ S ++ G+L+ ++Q+ +D N+ ++ A IS+ G D+F +
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KK++D + + ++ +L
Sbjct: 827 DLKNKKVKDTKTLKTLEDQL 846
>gi|323497974|ref|ZP_08102983.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
gi|323317019|gb|EGA70021.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
Length = 873
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ I R K VI ++ LE P ++++ + +PT+ +
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFTVKTKIDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLGIHLHAAKITTIGERAEDLFIITSENGG 850
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN A TVI+++ ++ G+L + + LN ++L + A IS+ G +DVF V
Sbjct: 863 PPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYV 922
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV 108
D G K+ + I+++L T + S+ +S
Sbjct: 923 KDVFGLKVEHASKLAAIREKLLTALAEPGSVSASA 957
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 28/207 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D PGLFS + +A ++V+A I+T D A +T P +
Sbjct: 764 TEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATDGPFDQPTK 823
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L+ + + + G R+A + + +R R V +V
Sbjct: 824 LARLSAAIHKAMSGELKTRQALREKAAGALPSRTR------------------VFKVP-- 863
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N +TVI + +DRP LL DI L + V ++T A F
Sbjct: 864 ---PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVF 920
Query: 296 YIRHVDGLPISSEAE----RERVIQCL 318
Y++ V GL + ++ RE+++ L
Sbjct: 921 YVKDVFGLKVEHASKLAAIREKLLTAL 947
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL S++ L L V +A+I T+ + A V +V D G ++
Sbjct: 876 HTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKD-VFGLKVEHAS 934
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L L
Sbjct: 935 KLAAIREKLLTAL 947
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + GI +++ ++ V I A I ++ G+ +D F V D G++ +
Sbjct: 725 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGQRFGEDN 784
Query: 86 VIDYIQQR----LETDASFAPSL---------------RSSVGVMPTEEH--TSIEFTGT 124
++ I++ LE A P L R SV H T IE +
Sbjct: 785 QLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEVSAR 844
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + H + +A I + +RAA +VTD TG I DP RL TI+ L
Sbjct: 845 DRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPSRLETIRAAL 903
Query: 185 FNV 187
+
Sbjct: 904 VDA 906
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V DN+ TVI+V + ++ +L ++ + L + + +I+ A+I+ G D F V
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D ++ I+ L AS
Sbjct: 884 DLTGDKITDPSRLETIRAALVDAAS 908
>gi|414875535|tpg|DAA52666.1| TPA: hypothetical protein ZEAMMB73_008664 [Zea mays]
Length = 270
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 238
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 239 -YRGGKLNSSLSQALTNCLRYY--LRRPET 265
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 100 FAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
FA LR + + P E+ T + F D PG+FS +C L+ + NVV+A +T
Sbjct: 718 FAQMLRGLGNDEVRIKLTPDEDRDATRVCFAMADHPGIFSRMCGALSLVGANVVDARTFT 777
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
D A S G ++ RL +++++ L G I+ RE
Sbjct: 778 SKDGFATAAFWVQDSDGTPFEE-TRLPRLRKMIERTLHG--------------DIVPRE- 821
Query: 212 RLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVC 270
F DRD + + RV +T N + YT+I + ++DRP LL D+
Sbjct: 822 -----AFADRDKIKKRERAFRVST-----SITFDNEGSEIYTIIEVDTRDRPGLLHDLTR 871
Query: 271 TLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
TL + + ++ T + FY++++ GL + + + + + L AI
Sbjct: 872 TLANANVYIASAVIATYGEQVVDTFYVKNMFGLKYHEQEKCDALERKLHEAI 923
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
+ DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V +
Sbjct: 842 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNM 901
Query: 77 DGKKIRDKEVIDYIQQRL 94
G K ++E D ++++L
Sbjct: 902 FGLKYHEQEKCDALERKL 919
>gi|163801777|ref|ZP_02195674.1| PII uridylyl-transferase [Vibrio sp. AND4]
gi|159174285|gb|EDP59089.1| PII uridylyl-transferase [Vibrio sp. AND4]
Length = 874
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD------ASFAPS------LRSSVGVMPTE--EH 116
+D GK I R VI ++ LE+ A P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAY 59
+D Y + ++ + P + +N +D TVI++ +++ G+L + + L+D+NL I A+
Sbjct: 821 VDSRYNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAH 880
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105
I + G +DVF V D G KI K I + LE A FAP+ R
Sbjct: 881 IGTYGEKAVDVFYVTDLTGGKITSKVRQKRIHEALE--AVFAPARR 924
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 54 VIKKAYISSDGGWFMDVFNV----IDCDGKKIRDKEVIDYIQQRLETDASFAPSL----- 104
+I ++ G+ +D F + + +KIR + D ++ LE L
Sbjct: 765 IIGAQIFNTKDGYALDTFRLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADLGVDSR 824
Query: 105 ---RSSVGVMPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152
R +PTE + T IE +G DR GL + L+DL+ + +A I T+
Sbjct: 825 YNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTY 884
Query: 153 NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
++A V +VTD TG I R I E L
Sbjct: 885 GEKAVDVFYVTD-LTGGKITSKVRQKRIHEAL 915
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
S S + E T + F D P L S + +++ A+I+ D
Sbjct: 724 SFAGSTSIKAFEGITEVTFYTPDHPRLLSLIAGACTTADASIIGAQIFNTKD-------- 775
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGY-----DDFRKAKTSLSPPGIMNRERRLHQIM 217
GYA+ F + R + + R ++ + ++ + L +
Sbjct: 776 -----GYALDT-----------FRLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADL 819
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 276
D Y R R++ S ++ + N D +TVI + DR LL+ + L+D+
Sbjct: 820 GVDSRYNR------RLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLN 873
Query: 277 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
+ + T +A FY+ + G I+S+ ++R+ + LEA
Sbjct: 874 LTIGSAHIGTYGEKAVDVFYVTDLTGGKITSKVRQKRIHEALEA 917
>gi|323495364|ref|ZP_08100442.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
gi|323310435|gb|EGA63621.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
Length = 873
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPTE--EH 116
+D G+ I R K VI ++ LE R + V +PT+ +
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRQTKIKTRRIPRNLQHFKVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T + G
Sbjct: 799 TLLEFVALDTPGLLATVGATFADLGVHLHAAKITTIGERAEDLFIITSKNGG 850
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 858 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G KI DK +D I+ L
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTL 946
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 31/227 (13%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 761 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 820
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L+ + L+ L G + + ++ G RR+ I
Sbjct: 821 FEEPQQLARLSLLVEQALTGRININR---EIAQCGRRLSGRRMRAIHVP----------- 866
Query: 231 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + TV+ + +DRP LL D+ L++ + + + T
Sbjct: 867 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 290 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASEV 329
A FY++ + GL I+ + +R+ +Q EAA +R++SE+
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRQSSEL 964
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ IDN T ++ S ++ G+L+ ++Q+ +D N+ ++ A IS+ G D+F +
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KKI+D +++ ++ +L
Sbjct: 827 DLKNKKIKDTKILKTLEDQL 846
>gi|224110178|ref|XP_002315438.1| predicted protein [Populus trichocarpa]
gi|222864478|gb|EEF01609.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ +DAT++++ ++ G L+ + L + L + K + +DG F +
Sbjct: 11 PVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPVKQTKFFIT 70
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + ++S ++ + G+ E+ ++ T
Sbjct: 71 RLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 130
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 131 VKEDGPKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS--YRG 188
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ ++L N LR Y R+ +T +
Sbjct: 189 AALT-----SSLSQVLVNCLRYY--LRRPETDI 214
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 24/236 (10%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA P + + T ++ + DR G + L L +V + T
Sbjct: 2 EQDADLVPMPVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGP 61
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRL 213
+T TG ++DP L I+ + N L Y + ++ GI E++L
Sbjct: 62 VKQTKFFITRLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKL 121
Query: 214 HQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLT 273
D D V K P+ ++L IE + DRP LL +I+ +
Sbjct: 122 ------DVDI------TTHVHVKEDGPKRSLLCIE---------TADRPGLLVEIIKIIA 160
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
D+ V ++T A +F++ + SS + + ++ CL + R +++
Sbjct: 161 DVNIDVESAEIDTEGLVAKDKFHVSYRGAALTSSLS--QVLVNCLRYYLRRPETDI 214
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ + AT++++ ++ G L+ ++ L ++L ++K ++++G F +
Sbjct: 96 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 155
Query: 75 DCDGKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTSI 119
DG+K+ D ++++ I+ + ++S ++ + G+ E+ H +
Sbjct: 156 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 215
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ G DRPGL E+ ++ D++ +V +AEI T A HV+
Sbjct: 216 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVSYRGAAL 275
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ S++ +++ N LR Y R+ +T
Sbjct: 276 S-------SSLSQVMINSLRYY--LRRPET 296
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L+++ L I A +S+ G +DVF V
Sbjct: 841 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYV 900
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 901 KDVFGLKVTHEGKLAKIKERL 921
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 175
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGGAFESGD 801
Query: 176 RLSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEK 228
+L+ + ++ VL G +D +T+ + +R R H +++ D+
Sbjct: 802 KLAKLSVMIEKVLSGQLKPLNDLSTRRTTQA-----SRTRVFHVPPRVLIDN-------- 848
Query: 229 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
N +TVI + +DRP LL+D+ L+++ + V+T
Sbjct: 849 -----------------NASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFG 891
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+A FY++ V GL ++ E + ++ + L +A++
Sbjct: 892 EKAIDVFYVKDVFGLKVTHEGKLAKIKERLLSALD 926
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L++L + +A++ T ++A V +V D G +
Sbjct: 854 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKD-VFGLKVTHEG 912
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
+L+ IKE L + L DD PP + R R
Sbjct: 913 KLAKIKERLLSAL---DD---PSGDAPPPATVKRTR 942
>gi|343505423|ref|ZP_08742995.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
gi|342807721|gb|EGU42901.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
Length = 874
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++ + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPTKPLVLISEKATRGGTEVFVYHKDQRALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETD------ASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADLH N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLHINLHAAKITTIGERAEDLFIITGA 847
Query: 166 STG 168
G
Sbjct: 848 EGG 850
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 29/299 (9%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D +I V+ +K G+ + +++ D L I K +S+DG W V VI +
Sbjct: 19 NKPGDPFIITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIP---YSV 75
Query: 82 RDKEVIDY--IQQRLETDASFAPSLRSSVGVMPTEEHTS----IEFTGTDRPGLFSEVCA 135
Y +++RL+ P +S V+ +S ++F DR GL +V
Sbjct: 76 LLPMSCSYLILKERLQ---KICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTK 132
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
VL++L + ++ T D R + VTD+ ++ R E L VLR D
Sbjct: 133 VLSELELTIQKVKVTTTPDGRVLDLFFVTDNKELLHTRN--RQDETCERLNAVLR--DSC 188
Query: 195 RKAKTSLSPP------GIMNRERRLHQIMF--DDRDYERVEKAVGRVEDKSSRPQVTVLN 246
+ L+ P GI + L + +F + D E +A+ K + VT+ N
Sbjct: 189 ISCELQLAGPEYEYNQGISSLSPALAEELFRCELSDNEVRAQALSPDMTKLKKTNVTMDN 248
Query: 247 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF--YIRHVDG 302
+ +T++ +R D LL+DI+ TL D+ + +G + + Y++ +I+ DG
Sbjct: 249 SLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPN-SMGYRDLDIFIQQKDG 306
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF--MDVFNVI 74
V +DN+ T++++ + G+L +++ L D+N+ I S + + +D+F +
Sbjct: 244 VTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPNSMGYRDLDIF-IQ 302
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D E + RL+ + P P E +E +G RP +F
Sbjct: 303 QKDGKKILDPEKQSALCSRLKQEM-LHPLRVIIANRGPDTELLVANPVELSGMGRPRVFY 361
Query: 132 EVCAVLADLHCNVVNAEIWTHN 153
+V L + V +AE+ H+
Sbjct: 362 DVTFALKTVGICVFSAEVGRHS 383
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 712 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 771
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
G A P++L+ IK + + SLS NR R + ++ + R
Sbjct: 772 VQDPLGGAFHSPEQLARIKAAI-------------EDSLS-----NRHRMITKL--EARP 811
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R R+E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 812 LPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 866
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319
V T A FY+ + G I S+A +Q LE
Sbjct: 867 AHVATYGERAVDTFYVTDLLGGKIESKAR----LQTLE 900
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 824 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI K + +++RL
Sbjct: 884 DLLGGKIESKARLQTLERRL 903
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 714 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 773
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
G A P++L+ IK + + SLS NR R + ++ + R
Sbjct: 774 VQDPLGGAFHSPEQLARIKAAI-------------EDSLS-----NRHRMITKL--EARP 813
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R R+E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 814 LPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 868
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319
V T A FY+ + G I S+A +Q LE
Sbjct: 869 AHVATYGERAVDTFYVTDLLGGKIESKAR----LQTLE 902
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI K + +++RL
Sbjct: 886 DLLGGKIESKARLQTLERRL 905
>gi|417319179|ref|ZP_12105737.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6.1|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|433658394|ref|YP_007275773.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509082|gb|AGB10599.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 874
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN TVI+V+ ++ G L V Q L V + I A IS+ G +DVF V
Sbjct: 825 PPRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K+ K + I++ LE
Sbjct: 885 KDVFGMKVVHKTKLAQIREALEA 907
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS++ +A +++A I T D A G I +P+R+ + +
Sbjct: 735 DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQTLDGRPIAEPERIERLARTV 794
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
VL G +A +P RL + R + P+V +
Sbjct: 795 RGVLTGTIALARALQEQAP--------RLPE----------------RAHALTVPPRVLI 830
Query: 245 LN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
N K +TVI + +DRP L + LT + + ++T FY++ V G+
Sbjct: 831 DNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGM 890
Query: 304 PISSEAERERVIQCLEAAI 322
+ + + ++ + LEAAI
Sbjct: 891 KVVHKTKLAQIREALEAAI 909
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVID 75
V+ D++ +I D + G+ ++ + + I A I++ G +D F +
Sbjct: 718 VIPDSHRSVSDVIIYTD--DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQT 775
Query: 76 CDGKKIRDKEVID--------------YIQQRLETDASFAPSLRSSVGVMP--------T 113
DG+ I + E I+ + + L+ A P ++ V P +
Sbjct: 776 LDGRPIAEPERIERLARTVRGVLTGTIALARALQEQAPRLPERAHALTVPPRVLIDNQAS 835
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ HT IE G DRPG V L + + +A I T+ +R V +V D G +
Sbjct: 836 KTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKD-VFGMKVVH 894
Query: 174 PKRLSTIKELL 184
+L+ I+E L
Sbjct: 895 KTKLAQIREAL 905
>gi|372280408|ref|ZP_09516444.1| PII uridylyl-transferase [Oceanicola sp. S124]
Length = 921
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 46/242 (19%)
Query: 96 TDASFAPSLRSSVGVMPTEE------------HTSIEFTGTDRPGLFSEVCAVLADLHCN 143
T A+FA LR G +P +E T F D PG+F+ + LA + N
Sbjct: 702 TQAAFAGMLR---GGLPVDEIRIDLKADDDHDATRALFAMADHPGIFARLSGALALVGAN 758
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSP 203
VV+A +T D A + G A + RL + +++ +LRG R+A
Sbjct: 759 VVDARTYTTVDGYATAAFWVQDAEG-APYEASRLPRLTQMIHKILRGEVVTREAMQDRDR 817
Query: 204 PGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD 260
I RER + FD+ E YT+I + ++D
Sbjct: 818 --IKKRERAFKVSTSVAFDNEGSE-------------------------IYTIIEVDTRD 850
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
RP LL D+ TL + ++ T + FY++ + GL + S+++++ + L
Sbjct: 851 RPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDMFGLKLFSDSKQKALEAKLRE 910
Query: 321 AI 322
AI
Sbjct: 911 AI 912
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 27/203 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + N+V+A +T D A V S G + RL +
Sbjct: 729 FALHDHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQDSEGRPY-EVARLPRL 787
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL-HQIMFDDRDYERVEKAVGRVEDKSSR 239
+ ++ L+G R+A RE R I FD+ E
Sbjct: 788 RGMIDKTLKGEVLPREALADRDKVKKREREFRFPTHITFDNEGSE--------------- 832
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
YT+I + ++DRP LL+D+ TL + ++ T + FY++
Sbjct: 833 ----------IYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKD 882
Query: 300 VDGLPISSEAERERVIQCLEAAI 322
+ GL + ++A++E + L AI
Sbjct: 883 MFGLKLHTKAKQEALETKLRQAI 905
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 821 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYV 880
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++ +L
Sbjct: 881 KDMFGLKLHTKAKQEALETKL 901
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L V + L +NL I A +++ G +DVF V
Sbjct: 848 PPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVG 109
D G K+ + + I+Q L +TDA A R G
Sbjct: 908 KDVFGLKVTHEAKLTQIRQALLDALADPDTDARTAKPPRRKAG 950
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS----T 179
D PGLFS + LA +V+A I+T ++ A V + G + + P +L+
Sbjct: 756 ADHPGLFSRLAGALALAGATIVDARIFTMSNGMALDVFSVHAAHGGSFESPDKLARLAVL 815
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
+++ L LR D+ K +++ P RV K
Sbjct: 816 VEKALAGELRMADELAKRRSATLP------------------SRARVFKVP--------- 848
Query: 240 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+V V N +TV+ + DRP LL+ + LT + + V T A FY++
Sbjct: 849 PRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVK 908
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
V GL ++ EA+ ++ Q L A+
Sbjct: 909 DVFGLKVTHEAKLTQIRQALLDAL 932
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E G DRPGL V L L+ + +A++ T+ + A V +V D G +
Sbjct: 861 HTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKD-VFGLKVTHEA 919
Query: 176 RLSTIKELLFNVLRGYD-DFRKAKTSLSPP 204
+L+ I++ L + L D D R AK PP
Sbjct: 920 KLTQIRQALLDALADPDTDARTAK----PP 945
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT----- 122
G+K+ D ++++ I+ + ++S ++ G+ E+ +E
Sbjct: 168 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPEKKVDVEVATHVIV 226
Query: 123 -------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
DRPGL EV ++ D++ +V +AEI T A HV+
Sbjct: 227 QDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEGLVAKDKFHVS------ 280
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 281 -YRGAKLNSSLSQVLVNCLRYY--LRRPET 307
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 908 ADLVGQKISNENRRAYITARLKA 930
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKIS 916
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R + I L V+ G +D + + P GI+
Sbjct: 917 NENRRAYITARLKAVMAGEEDEMRERM---PSGII 948
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 908 ADLVGQKISNENRRAYITARLKA 930
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKIS 916
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R + I L V+ G +D + + P GI+
Sbjct: 917 NENRRAYITARLKAVMAGEEDEMRERM---PSGII 948
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKI-RDK 84
AT I + + K + L +NL I+ A I S G G+ +D F V+D +G+ I D
Sbjct: 709 ATQIFIHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDTFFVLDSNGEPIGNDP 768
Query: 85 EVIDYIQQRL-----ETDAS--------------FAPSLRSSVGVMPTEEHTSIEFTGTD 125
E ID IQ L TD+S F+ R+++ H+ +E D
Sbjct: 769 ERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFTDVAGGHSVLEVLTPD 828
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
RPGL + + + D ++NA+I T + V +TD++ I DP +I+
Sbjct: 829 RPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNH-QPINDPALCESIQ 883
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 825 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 885 ADLVGQKISNENRRAYITARLKA 907
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I
Sbjct: 835 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKIS 893
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R + I L V+ G +D + + P GI+
Sbjct: 894 NENRRAYITARLKAVMAGEEDEMRERM---PSGII 925
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
+ G IS+E R + L+A +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVM 909
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + ++ D G
Sbjct: 739 TELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG-- 796
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ +VL G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDVLEG---------KLRLPEVVARR-----------------TVR 826
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+ P+VT+ N D YTVI M DRP LL+++ ++ + + V T
Sbjct: 827 GKARPFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGE 886
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G IS+ + + L
Sbjct: 887 RARDVFYVTDLLGAQISAPTRQSAIKSAL 915
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI++ +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI+ L L G R K+
Sbjct: 908 TIRNRLMATLEGIVPERGGKS 928
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + I I+ RL
Sbjct: 893 TDLTGQKIDNPARIATIRNRL 913
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 29/238 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DAS L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAS-GNKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
R +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PRRGSKVFKIPPRAEIRNT--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 328
+ + + T + FY+ + G I + A R R++ LE + R +
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLMATLEGIVPERGGK 927
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 21 NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA--YISSDGGWFMDVFNVIDCDG 78
++ A+ T I V + +K +L+++ L ++L I A Y +DG ++ F V++ DG
Sbjct: 248 DSPVANTTQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGA-TLNTFYVLNSDG 306
Query: 79 KKIRDKEV-IDYIQQRLETDASFAPSLRSSVG---------VMPTEEH---------TSI 119
I E +DYI+ +ET + S RSS VMPTE H T +
Sbjct: 307 SPIASDEANLDYIRSSIETGLASNKS-RSSTRRTPRQLKSFVMPTETHIRQDLDRGWTIL 365
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E DRPGL + + A+ D + +A+I T +R V VTD G A+ + L
Sbjct: 366 EVATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQ-GRALTNNTTLEH 424
Query: 180 IKELLFNVLRG 190
++ + L G
Sbjct: 425 LQTAIRETLDG 435
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPTRMA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI + L L G R K
Sbjct: 908 TIHKRLIETLEGTAPERNGKA 928
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+++ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL-ETDASFAP 102
D G+KI + I +RL ET AP
Sbjct: 893 TDLTGQKIDSPTRMATIHKRLIETLEGTAP 922
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 31/236 (13%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA+ L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAA-GKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P
Sbjct: 774 GRALDTILISREFDLDEDERRRAERVGRLIEDVLSG--------KSWLPE---------- 815
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 273
M + R R V R+ P+ + N + ++VI + DRP LL +I L+
Sbjct: 816 --MIEKRTKPRRGAKVFRIP-----PRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALS 868
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERR 325
D+ + + T + FY+ + G I S +R+I+ LE R
Sbjct: 869 DLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPTRMATIHKRLIETLEGTAPER 924
>gi|429769827|ref|ZP_19301919.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
gi|429186183|gb|EKY27137.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
Length = 896
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 669 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 728
Query: 170 AIKDPKRLS-TIKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 227
++P+RL+ +K + VL+G A+TS + P + R + +F+ R R++
Sbjct: 729 GGREPRRLALLVKAMERAVLKG------ARTSAMQAPRVSAR-----RAVFEVRPVVRID 777
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
G VI + DRP LL D+ T++ Y V +
Sbjct: 778 ADTG-----------------TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASF 820
Query: 288 RTEAYQEFYIRHVDGLPISSEAERE 312
A FYI DG S+A+ E
Sbjct: 821 GERAVDGFYITDPDGRKPKSKAKLE 845
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID +T A VI+V ++ G+L + + ++ + A+++S G +D F +
Sbjct: 772 PVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYIT 831
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D DG+K + K ++ ++ L
Sbjct: 832 DPDGRKPKSKAKLEALKADL 851
>gi|254474863|ref|ZP_05088249.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
gi|214029106|gb|EEB69941.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
Length = 942
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 757 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDTEGHPY-EADRLPRL 815
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+++ L+G + + S I RER + I FD+ E
Sbjct: 816 SQMIHKTLKG--EVIAGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 860
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 861 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 908
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRA 326
+ + GL SEA+++ + L +AI A
Sbjct: 909 KDMFGLKYYSEAKQKSLEAKLRSAIAEGA 937
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ K R N P + DN+ T+I+VD+ ++ G+L + + L N+ I A I+
Sbjct: 837 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 896
Query: 62 SDGGWFMDVFNVIDCDGKK 80
+ G +D F V D G K
Sbjct: 897 TYGEQVVDAFYVKDMFGLK 915
>gi|356536361|ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 283
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ ++ G LL ++ L D+ L + K +S++G F +
Sbjct: 77 PIVLIDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 136
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASF---APS------LRSSVG 109
D G+K+ D ++++ I+ + L F AP +++ +
Sbjct: 137 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 196
Query: 110 VMPTEEHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V S+ + T DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 197 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS--YGG 254
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 255 AALN-----SSMAQVLVNCLRYY 272
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T ++ + DR G + L DL +V + T +T TG ++DP
Sbjct: 88 EATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFITQSDTGRKVEDP 147
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ + N L Y ++ GI +++L D D + R+
Sbjct: 148 DMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKL------DDDIKT------RI 195
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ K P+ ++L IE + DRP LL +I+ + D+ V ++T A
Sbjct: 196 QVKEDGPKRSLLYIE---------TADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKD 246
Query: 294 EFYIRHVDGLPISSEAERERVIQCL 318
F++ + SS A + ++ CL
Sbjct: 247 TFHVSYGGAALNSSMA--QVLVNCL 269
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 95 ETDASFAPSLRSSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
E A P R + V P + HT +E +G DRPGL E+ L+ L+ N+ +
Sbjct: 868 EVMAKKLPKARRTFSVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIAS 927
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
A + T +RA V +VTD G I R STI+ L V G D
Sbjct: 928 AHVATFGERAVDVFYVTD-LMGAKITGAARQSTIRRALIGVFEGSFD 973
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 75 DCDGKKI 81
D G KI
Sbjct: 945 DLMGAKI 951
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S P+VTV N + +TV+ + DRP LLF++ TL+ + + V T A F
Sbjct: 882 SVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVF 941
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y+ + G I+ A + + + L E
Sbjct: 942 YVTDLMGAKITGAARQSTIRRALIGVFE 969
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + + S ++ + G+ E+ H
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|153871765|ref|ZP_02000853.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
gi|152071768|gb|EDN69146.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
Length = 891
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 17 VVIDNNTCADAT-VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVI 74
VV++ T T +I +D+ + NL + AYI SD + + + VI
Sbjct: 694 VVLERQTTRGGTGIIVIDTRGCDYLFADTTYFFEQHNLTVVDAYIIPSDSKYTISGYTVI 753
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVG----------VMPTEEH- 116
+ DG +I KE ++ I Q L ET+A F P R G V T++H
Sbjct: 754 EDDGTEITPKEQVEKILQSLTQALSRDETNAPFYPINRRIPGHLKHFPELTRVTFTQDHI 813
Query: 117 ---TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
T+++ TDRPG+ S + V A+I T R V VTD+ +A+
Sbjct: 814 NNHTTVQVITTDRPGVLSRIAQAFLTCQIRVKKAKIATFGTRVEDVFFVTDYE-NHALYS 872
Query: 174 PKRLSTIKELLFNVL 188
K+L +++ L +L
Sbjct: 873 SKQLDCLRDKLSELL 887
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + + S ++ + G+ E+ H
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ATVI+V ++ G+L ++ + L+D L I+ A+++ G +D F V
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G+KI + V+D + LE AP
Sbjct: 829 DARGRKITSEAVLDEVHAALEAVLDRAP 856
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-V 159
A R G M E T I DRPGLF+++ AVLA +V A + T D V
Sbjct: 657 AAEARQGPGTM--EATTEIALAARDRPGLFADLTAVLAAAGADVAGARVATAADGTVLDV 714
Query: 160 VHVTDHS-TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
V D + Y +P+RL+++ L RG +T ++PP + R + +F
Sbjct: 715 FQVQDGADRPYGQDEPRRLTSLIAALEAAARG-------ETPVAPPAMPAPSPR--RAVF 765
Query: 219 DDRDYERVEKAVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
D RP V + + + TVI + DRP LL ++ TL+D
Sbjct: 766 D------------------VRPVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHAL 807
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+ V A FY+ G I+SEA + V LEA ++R
Sbjct: 808 SIRSAHVAGFGERAVDSFYVTDARGRKITSEAVLDEVHAALEAVLDR 854
>gi|262404596|ref|ZP_06081151.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
gi|262349628|gb|EEY98766.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
Length = 876
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPTE--EH 116
+D +G+ I R + +I ++ Q LE +R + V +PT+ +
Sbjct: 739 LDQNGQAIEENRHQALIHHLVQVLEEGRPTTQKVRRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + D +
Sbjct: 799 TLMEFVALDTPGLLASVGATFAELNFDLHAAKITTIGERAEDLFILTN-SQGARLNDEEE 857
Query: 177 LSTIKELLFNV 187
+ L+ NV
Sbjct: 858 QLLRERLIENV 868
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
+I D GLF+ V +A N+V+A I T D A S A D R
Sbjct: 727 AAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQDSDRSAYDDEVR 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++ +++L+ L G + R AK + RD + R +
Sbjct: 787 VARMRDLVGRTLSG--ELRPAKA-----------------LAARRDGPK------RTDVF 821
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N TVI + ++DRP LLF I L+D+ + V T A F
Sbjct: 822 QVTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTF 881
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y++ V GL I+ + + RV + L AA++
Sbjct: 882 YVKDVFGLKITHQGKLTRVREELLAALD 909
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+IDN TVI+V + ++ G+L + VL+D+ L I A++++ G +D F V
Sbjct: 825 PRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVK 884
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + + +++ L
Sbjct: 885 DVFGLKITHQGKLTRVREEL 904
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 3 DEYAKLIR---RMNPPRVVID--NNTCADATVIKVDSVNKHGILLQVI--QVLNDVNLVI 55
+ +A+L+ R P +VID + I V + + HG+ V L N+V
Sbjct: 697 ERHARLVAKADRQGPAPLVIDVAPDRFRSVAAITVYAPDHHGLFAGVAGAMALAGGNIVD 756
Query: 56 KKAYISSDGGWFMDVFNVIDCDGK----KIRDKEVIDYIQQRLETDASFAPSL------- 104
+ ++DG +D F V D D ++R + D + + L + A +L
Sbjct: 757 ARIVTTTDG-MALDTFWVQDSDRSAYDDEVRVARMRDLVGRTLSGELRPAKALAARRDGP 815
Query: 105 -RSSV-GVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
R+ V V P + T IE T DRPGL + +VL+DL + +A + T+ +
Sbjct: 816 KRTDVFQVTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGE 875
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
RA +V D G I +L+ ++E L L
Sbjct: 876 RAVDTFYVKD-VFGLKITHQGKLTRVREELLAAL 908
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI+ L L G R K
Sbjct: 908 TIRNRLMATLEGIAPERGGKA 928
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI I I+ RL
Sbjct: 893 TDLTGQKIDSPARIATIRNRL 913
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 29/239 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA+ L + V E T I D P L S + N+V+A+I+T D
Sbjct: 715 EADAA-GKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTAD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
+ +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PKRGAKVFKIPPRAEIRNT--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASEV 329
+ + + T + FY+ + G I S A R R++ LE R +
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLMATLEGIAPERGGKA 928
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 34/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ + AT++++ ++ G L+ ++ L ++L ++K ++++G F +
Sbjct: 75 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 134
Query: 75 DCDGKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTSI 119
DG+K+ D ++++ I+ + ++S ++ + G+ E+ H +
Sbjct: 135 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 194
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ G DRPGL E+ ++ D++ +V +AEI T A HV+ G
Sbjct: 195 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS--YRGA 252
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ +++ N LR Y R+ +T
Sbjct: 253 ALS-----SSLSQVMINSLRYY--LRRPET 275
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 179 TIKELLFNVLRG 190
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + I I+ RL
Sbjct: 893 TDLTGQKIDNPARIATIRNRL 913
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 30/235 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA+ L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAA-GNKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
R +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PRRGSKVFKIPPRAEIRNA--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEA-AIER 324
+ + + T + FY+ + G I + A R R+I LE A+ER
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLIATLEGVALER 924
>gi|146276521|ref|YP_001166680.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17025]
gi|145554762|gb|ABP69375.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17025]
Length = 930
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V + G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDAEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A RD ++V+K
Sbjct: 796 EIS---RLPRLTSMIDKTLKGEVVAREAL----------------------RDRDKVKKR 830
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
E + P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 831 ----ESQFRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKTRQETLEKKLRQAI 921
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKTRQETLEKKL 917
>gi|375266429|ref|YP_005023872.1| PII uridylyl-transferase [Vibrio sp. EJY3]
gi|369841749|gb|AEX22893.1| PII uridylyl-transferase [Vibrio sp. EJY3]
Length = 874
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 6 AKLIRR--MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R + P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDLTKPLVLISKKATRGGTEVFVYSKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSS 107
G +D F V+D G+ I R VI ++ LE P ++++
Sbjct: 728 KDGHVIDTFIVLDQHGEAIDESRHAAVIKHLTHVLEDGRPTKIKTRRTPHKLQHFNVKTK 787
Query: 108 VGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT ++HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTRGKKHTLMEFVALDTPGLLAKVGRTFADLNINIHGAKITTIGERAEDLFILTSG 847
Query: 166 STG 168
+ G
Sbjct: 848 TGG 850
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN A TVI+V+ ++ G+L + + L +NL I A IS+ G +DVF V
Sbjct: 841 PPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYV 900
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++ L
Sbjct: 901 KDIFGLKVAHEAKLTQIRKEL 921
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS--TGY 169
P T + D GLFS + +A ++V+A I T + A V + +G
Sbjct: 736 PGRSVTEVTIYTADHAGLFSRLAGAMALAGGDIVDARITTMTNGMALDVFSLQGAGPSGA 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
++ S +K + L G D + A P + R L
Sbjct: 796 RFDSGEKRSRLKSSVEKALAG--DIKLA------PELAKRASPLPS-----------RTR 836
Query: 230 VGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
V RV P+V V N YTVI + +DRP LL+D+ LT + + ++T
Sbjct: 837 VFRVP-----PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYG 891
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
A FY++ + GL ++ EA+ ++ + L A ++
Sbjct: 892 NAAVDVFYVKDIFGLKVAHEAKLTQIRKELLAVLD 926
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Query: 65 GWFMDVFNV---------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
G +DVF++ D K+ R K +++ L D AP L +P+
Sbjct: 779 GMALDVFSLQGAGPSGARFDSGEKRSRLKS---SVEKALAGDIKLAPELAKRASPLPSRT 835
Query: 116 ------------------HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+T IE G DRPGL ++ L L+ + +A+I T+ + A
Sbjct: 836 RVFRVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAV 895
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +V D G + +L+ I++ L VL
Sbjct: 896 DVFYVKD-IFGLKVAHEAKLTQIRKELLAVL 925
>gi|77462355|ref|YP_351859.1| PII uridylyl-transferase [Rhodobacter sphaeroides 2.4.1]
gi|91206754|sp|Q3J5H6.1|GLND_RHOS4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77386773|gb|ABA77958.1| uridylyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 930
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|332560239|ref|ZP_08414561.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
gi|332277951|gb|EGJ23266.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
Length = 938
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 744 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 803
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 804 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 840
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 841 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 894
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 895 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 929
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 845 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 904
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 905 KDMFGLKLHQKNRQETLEKKL 925
>gi|221638214|ref|YP_002524476.1| PII uridylyl-transferase [Rhodobacter sphaeroides KD131]
gi|221158995|gb|ACL99974.1| PII uridylyltransferase [Rhodobacter sphaeroides KD131]
Length = 930
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT++++ ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
+ G+K+ D ++++ I+ + ++S ++ G+ + ++F
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVS--YGG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 254 AALN-----SSMSQVLVNCLRYY 271
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T ++ + DR G + L DL +V + T +T +TG ++DP
Sbjct: 87 EATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVEDP 146
Query: 175 KRLSTIK-ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ ++ N+L+ + + + GI ++L D D+ R+
Sbjct: 147 DMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKL------DLDF------ATRI 194
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ K P+ ++L IE + DRP LL +I+ + D+ V ++T A
Sbjct: 195 QVKEDGPKRSLLYIE---------TADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKD 245
Query: 294 EFYIRHVDGLPISSEAERERVIQCL 318
+F++ + G ++S + ++ CL
Sbjct: 246 KFHVSY-GGAALNSSMS-QVLVNCL 268
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|338707473|ref|YP_004661674.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294277|gb|AEI37384.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 923
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 26/248 (10%)
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
R +++ I+Q TD + S+ MP + T I D PG F + +
Sbjct: 701 RSDVIVENIRQMAATDKA-QKSISVKGKEMPAYDATMISLYAIDHPGFFYRIAGAIHATG 759
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+++A I T D A + H+ G IK + L+ + + + + + +L
Sbjct: 760 GTILDARIHTTRDGMAMDNLLVQHTQGGIIKTGEHLNRMMQAIEDAATSHIRTSNKLAAL 819
Query: 202 SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKD 260
PP +F D VE P V + N D +TVI + ++D
Sbjct: 820 RPP------------LFWRGDAFHVE------------PSVFIDNQASDRFTVIEVNAQD 855
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
RP LL D+ C L + + + + T A FY+ + I+++ + + + L A
Sbjct: 856 RPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVSDLLAHKITNQNRLKAIEKRLLA 915
Query: 321 AIERRASE 328
A ER S+
Sbjct: 916 AAERANSK 923
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 893
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPS 103
D KI ++ + I++RL A A S
Sbjct: 894 DLLAHKITNQNRLKAIEKRLLAAAERANS 922
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 1 MDDEYAKLIRRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK 56
++ + K RR P+V IDN TVI+++++++ G+L ++ L D++L I
Sbjct: 842 LESQAGKPARRQQAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIA 901
Query: 57 KAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
A+I++ G F+D F V D G KI ++E +D + L
Sbjct: 902 SAHIATYGEKFVDTFYVTDLVGSKILNEERLDIARATL 939
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
ETDA+ P + + + E T I D P L S + V A N+ +AEI+T D
Sbjct: 741 ETDAASIP-VATHIATRNFEAITEITLVAPDHPRLLSTITGVCAASGANIEDAEIYTMKD 799
Query: 155 -RAAAVVHVTDHSTGYAIKDP----KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
RA + V G DP +R I + + VLRG
Sbjct: 800 GRALDSIFV-----GRLYDDPDDEKRRARNIADTIEKVLRG------------------- 835
Query: 210 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 268
E+RL ++ + K R + + P+VT+ N + +TVI + + DR +L I
Sbjct: 836 EKRLSEL------ESQAGKPARRQQAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRI 889
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
TL D+ + + T + FY+ + G I +E
Sbjct: 890 TDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGSKILNE 929
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 75 DCDGKKIRDKEVIDYIQQ---------RLETDASFAPSLRSSVGVMP--------TEEHT 117
D D +K R + + D I++ LE+ A + + + P + + T
Sbjct: 814 DPDDEKRRARNIADTIEKVLRGEKRLSELESQAGKPARRQQAFTITPKVTIDNAASNKFT 873
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE DR G+ S + LADL ++ +A I T+ ++ +VTD G I + +RL
Sbjct: 874 VIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTD-LVGSKILNEERL 932
Query: 178 STIKELLFNVL 188
+ L VL
Sbjct: 933 DIARATLLEVL 943
>gi|126461232|ref|YP_001042346.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17029]
gi|126102896|gb|ABN75574.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17029]
Length = 930
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|163744702|ref|ZP_02152062.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
gi|161381520|gb|EDQ05929.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
Length = 940
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 31/209 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T F D PG+F+ + LA + NVV+A +T D S G A + R
Sbjct: 751 TRASFVMADHPGIFARLAGALALVGANVVDARSYTTKDGFVTDAFWIQDSEGNAY-EASR 809
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 233
L +++ + LRG R A S + RER I FD+ E
Sbjct: 810 LPRLRDTIEKTLRGEIVARDALKSRDK--VKKRERAFKVPTHITFDNEGSE--------- 858
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
YT+I + ++DRP LL+D+ TL + + ++ T +
Sbjct: 859 ----------------IYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVD 902
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAI 322
FY++ + GL +EA++ + + L AI
Sbjct: 903 TFYVKDMFGLKYYTEAKQRTLEKRLREAI 931
>gi|429207795|ref|ZP_19199051.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
gi|428189188|gb|EKX57744.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
Length = 930
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
I+ +G DRPGL SE+ L+DL ++ +A I T ++ +V+D TG I +P RL
Sbjct: 849 IDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSD-LTGQKIDNPARLK 907
Query: 179 TIKELLFNVLRGYDDFRKAK 198
TI++ L L+G R K
Sbjct: 908 TIRDRLIATLQGEAGQRGVK 927
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +VI V +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + + I+ RL
Sbjct: 894 DLTGQKIDNPARLKTIRDRL 913
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D P L S + A N+V+A+I+T +D A + +
Sbjct: 733 EAVTEITVLAQDHPRLLSVIAGACAAAGGNIVDAQIFTTSDGRALDTILISREFDRDEDE 792
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+R + L+ +VL G K+ L P I+ R R + R+
Sbjct: 793 RRRAERVGMLIEDVLSG-------KSWL--PEIIAR-----------RAKPKRGSKTFRI 832
Query: 234 EDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
E P+V + N + ++VI + DRP LL +I L+D+ + + T +
Sbjct: 833 E-----PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVI 887
Query: 293 QEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRA 326
FY+ + G I + A R+R+I L+ +R
Sbjct: 888 DTFYVSDLTGQKIDNPARLKTIRDRLIATLQGEAGQRG 925
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 913 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 971
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 972 APTRQSAIKSALTHVMAG 989
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 75 DCDGKKI 81
D G +I
Sbjct: 964 DLLGAQI 970
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
SV + +T +E +G DRPGL E+ + L+ L+ N+ +A + T +RA V ++TD
Sbjct: 842 SVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITD-L 900
Query: 167 TGYAIKDPKRLSTIKELLF 185
G I P R++TIK L
Sbjct: 901 MGARITSPTRIATIKRALL 919
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 26/214 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
ET+A L + P T + D P L S + A N+V+A+I+T D
Sbjct: 719 ETEAKGGDPLATRYSFDPARGVTVLTVLAPDHPWLLSVIAGACASAGANIVDAQIYTTTD 778
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + +R + + L LRG E RL
Sbjct: 779 GLALDTISVSREFERDDDEGRRAGRVVDALERALRG-------------------EMRLP 819
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 273
++M R+ A GR P+V+V N YTV+ + DRP LL+++ TL+
Sbjct: 820 EMMAAKRN------AKGRTRPFRVEPEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLS 873
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 307
+ + V T A FYI + G I+S
Sbjct: 874 KLNLNITSAHVATFGERAVDVFYITDLMGARITS 907
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L ++ L+ +NL I A++++ G +DVF +
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G +I I I++ L FAP
Sbjct: 899 DLMGARITSPTRIATIKRALLL--PFAP 924
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 39/212 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +S++ F+++
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 75 DCDGKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE--------HT 117
G+K+ D + ++ I Q E+ + A + G+ E+ H
Sbjct: 135 RS-GRKVEDPDTLEKIRLTVINNLLQYHPESSENLA--MGEFFGIKAPEKKVDVDVVTHV 191
Query: 118 SIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+E G DRPGL E+ ++ D++ +V +AEI T A HV+
Sbjct: 192 IVEDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS---- 247
Query: 168 GYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 248 ---YRGAKLNSSLSQVLVNCLRYY--LRRPET 274
>gi|336123498|ref|YP_004565546.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
gi|335341221|gb|AEH32504.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
Length = 874
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L+ NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKIRDK---EVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G I ++ +I ++ LET LR + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEECHPSLIKHLLSGLETGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 790 FLPTKSNKRTLMELVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GYAIKDPKRLSTIKELL 184
G ++ + T++E+L
Sbjct: 850 GKLSEEEE--CTLREML 864
>gi|451970864|ref|ZP_21924088.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
gi|451933281|gb|EMD80951.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
Length = 874
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago
truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago
truncatula]
Length = 168
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 16 RVVIDNNTCADATVIKVDSVNKH-GILLQVIQVLNDVNLVIKKAYISSD 63
+V IDN + D TV+KVDSVNKH G+LL ++ VL D+N I K+YISSD
Sbjct: 29 QVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSD 77
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 248 EKDYTVITMRSKDR-PKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 306
++D TV+ + S ++ +L D++ LTDM + + +++ E++IRH++G ++
Sbjct: 37 KEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISS------DEYFIRHINGYALN 90
Query: 307 SEAERERVIQCLEAAIERRASE 328
+ +E+E++I+ +EAAIERR E
Sbjct: 91 TTSEKEQLIKFIEAAIERRVCE 112
>gi|262393517|ref|YP_003285371.1| [protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|262337111|gb|ACY50906.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 874
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
PT + T + D PGLF+ A L N+V+A+I+T D A + G AI
Sbjct: 723 PTRDVTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQDPEGLAI 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ +R+ ++E++ VL G +S P + E +
Sbjct: 783 SEQRRIIRLEEMIRKVLSG---------EISAPDAI----------------ESRTRRER 817
Query: 232 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R E S PQV + N DYTVI + DRP L+ + L + + + T
Sbjct: 818 RAEAFSVAPQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FY++ V G +++ +++ V + L A+
Sbjct: 878 AVDVFYVKDVIGHKVTNANKKKAVERHLLEAL 909
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V IDN+ D TVI+V+ +++ G++ + + L + L I A+I++ G +DVF V
Sbjct: 826 PQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVK 885
Query: 75 DCDGKKI 81
D G K+
Sbjct: 886 DVIGHKV 892
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ A ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 904
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 905 APTRQAAIKRALIHLL 920
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P+V+++N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 829 RLRPFVVEPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGER 888
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 889 ARDVFYVTDLLGARI 903
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|91223471|ref|ZP_01258736.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
gi|91191557|gb|EAS77821.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
Length = 874
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|269966249|ref|ZP_06180338.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
gi|269829164|gb|EEZ83409.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
Length = 877
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 673 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 732
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 733 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 792
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 793 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 852
Query: 168 G 168
G
Sbjct: 853 G 853
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + IK L +V+ G
Sbjct: 904 APTRQAAIKSALTHVMAG 921
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + ++ D G
Sbjct: 739 TELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG-- 796
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ +VL G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDVLEG---------KLRLPEVVARR-----------------TVR 826
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+ P+VT+ N D YTVI M DRP LL+++ ++ + + V T
Sbjct: 827 GKARPFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGE 886
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G IS+ + + L
Sbjct: 887 RARDVFYVTDLLGAQISAPTRQAAIKSAL 915
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI++ +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|424047451|ref|ZP_17785010.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
gi|408883944|gb|EKM22707.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
Length = 874
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|269960589|ref|ZP_06174961.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
gi|269834666|gb|EEZ88753.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
Length = 874
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
FMDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGR 139
Query: 127 PGLFSEVCAVLADLHC 142
GL SEV AVLAD+ C
Sbjct: 140 TGLISEVFAVLADMDC 155
>gi|326503882|dbj|BAK02727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L +++ + D N+ + + Y G +D+F V
Sbjct: 246 VTMDNSLSPVHTLIQIQCGDHKGLLYDIMRTVKDCNIQVSYGRFYAGQKGRCEVDLFAV- 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D++ + RL T+ P + V P E +E +G RP +F
Sbjct: 305 QSDGKKILDQQKQRTMCSRLRTEL-LRPLHVALVNRGPDAELLVANPVEVSGKGRPLVFY 363
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHVT--DHSTGYAIKDPKRLSTIKELLF 185
++ L +LH V AEI H NDR V VH+ DH +++ S I + +
Sbjct: 364 DITLALKNLHRRVFLAEIGRHMVNDREWEVYRVHLGEDDHELSCSVR-----SKIVDSVT 418
Query: 186 NVLRGYD 192
N+L G+D
Sbjct: 419 NMLMGWD 425
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|389774314|ref|ZP_10192433.1| PII uridylyl-transferase [Rhodanobacter spathiphylli B39]
gi|388437913|gb|EIL94668.1| PII uridylyl-transferase [Rhodanobacter spathiphylli B39]
Length = 870
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + + +A I SS G +D F +
Sbjct: 677 PLVAVHPLSVRGSTELFVCTPDRDGLFATVTAVLDRLRFSVMEARILSSSTGMALDTFLL 736
Query: 74 IDCDGKK----IRDKEVIDYIQQRLETDASFAPSLRS------------SVGVMPTEEHT 117
+D D ++ R +E+ +Q+ L A PS R + + T
Sbjct: 737 LDADSQQPVSAARAQELQQRLQRALAQSAGVQPSKRGMSRHQKHFQMTPRISFHAAGDRT 796
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ GTDRPGL + V V++ V +A I T +R +TD
Sbjct: 797 QLALVGTDRPGLLAAVAQVMSSTGVRVHDARIATFGERVEDFFQLTD 843
>gi|224097618|ref|XP_002311013.1| predicted protein [Populus trichocarpa]
gi|222850833|gb|EEE88380.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ +++T++++ ++ G L+ + L D+ L + K + ++G F +
Sbjct: 12 PVVLIDQDSDSESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFIT 71
Query: 75 DCD-GKKIRDKEVIDYIQQ-------RLETDASFAPSLRSSVGVMPTEEHTSIEFTG--- 123
D G+K+ D ++++ I+ + ++S ++ + G+ E+ ++ T
Sbjct: 72 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 131
Query: 124 ---------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 132 VKEDGPKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS--YGG 189
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ ++L N LR Y R+ +T
Sbjct: 190 AALN-----SSLSQVLVNCLRYY--LRRPET 213
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T ++ + DR G + L DL +V + T +T +G ++DP
Sbjct: 23 ESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFITRLDSGRKVEDP 82
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ + N L Y + ++ GI E++L D D V
Sbjct: 83 DMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKL------DVDI------TTHV 130
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
K P+ ++L +E + DRP LL +I+ + D+ V ++T A
Sbjct: 131 HVKEDGPKRSLLCVE---------TADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKD 181
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+F++ + G ++S + ++ CL + R
Sbjct: 182 KFHVSY-GGAALNSSLS-QVLVNCLRYYLRR 210
>gi|254488051|ref|ZP_05101256.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
gi|214044920|gb|EEB85558.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
Length = 928
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 33/206 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F TD PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 743 FVMTDHPGIFARLAGALALVGANVVDARSYTTKDGYVTGAFWIQDADGNPY-DIARLPRL 801
Query: 181 KELLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDK 236
++++ L+G KA+ L S + RE+ I FD+ E
Sbjct: 802 RQMIGKTLKGEI---KAREELKSRDKVKKREKAFRVPTHITFDNEGSE------------ 846
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
YT+I + ++DRP LL+D+ +L + + + ++ T + FY
Sbjct: 847 -------------IYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFY 893
Query: 297 IRHVDGLPISSEAERERVIQCLEAAI 322
++ + GL SE++++ + + L AI
Sbjct: 894 VKDMFGLKYYSESKQKTLEKRLRTAI 919
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 835 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYV 894
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K + +++RL T
Sbjct: 895 KDMFGLKYYSESKQKTLEKRLRT 917
>gi|444377211|ref|ZP_21176444.1| [Protein-PII] uridylyltransferase [Enterovibrio sp. AK16]
gi|443678676|gb|ELT85343.1| [Protein-PII] uridylyltransferase [Enterovibrio sp. AK16]
Length = 873
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T I V S ++ + +V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLVLVSKNATRGGTEIFVYSQDRPSLFARVVAALDKKNLSVHDAQIMTSKDGFALDTFMV 739
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDAS------------FAPSLRSSVGVMPTE--EH 116
+D + I R +++ + + L D A ++++ V +PT
Sbjct: 740 LDSHNEAIQPDRHEKIREGVTLALTQDGPITIPVKRASRKLMAFNVKTQVSFLPTRTGRR 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E D PGL + V AV A ++ A+I T +RA VTD A+ D +
Sbjct: 800 TLLELVALDTPGLLARVGAVFAREGVSLQAAKITTIGERAEDFFIVTD-GERQALSDEVQ 858
Query: 177 LSTIKELLFNVL 188
T+KE LF+ L
Sbjct: 859 -KTLKEALFDAL 869
>gi|194701562|gb|ACF84865.1| unknown [Zea mays]
gi|413916121|gb|AFW56053.1| ACT domain containing protein [Zea mays]
Length = 271
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 67 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 126
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPT--------EEHTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P H +
Sbjct: 127 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 185
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 239
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S+ ++L N LR Y R+ +T
Sbjct: 240 -YRGAKLNSSSSQVLINCLRYY--LRRPET 266
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 15 PRVVID---NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
P V+I N A AT I V S ++ + + V L +NL I+ A I SS+ G +D
Sbjct: 702 PLVLIKKTANKELAGATQIFVYSKDQKNVFVAVATALAQLNLSIQDAKIYSSNSGHTIDT 761
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDAS-------------------FAPSLRSSVGV 110
F V++ DG+ + + ++ IQQ L + FA R+S+
Sbjct: 762 FFVLNEDGEPLGNNPTLLKKIQQTLIDELGLVDNYRDVIGRRTPRRLKYFASPTRTSLNT 821
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ +E DRPGL + + + D ++NA+I T +R + + D S G
Sbjct: 822 DMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIVD-SQGKP 880
Query: 171 IKDP 174
+ DP
Sbjct: 881 LGDP 884
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 46/82 (56%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P R ++ + + +V++V S ++ G+L + ++ D ++ + A I++ G D+F
Sbjct: 813 SPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFF 872
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
++D GK + D + + +QQ +
Sbjct: 873 IVDSQGKPLGDPVLCEKLQQEI 894
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
AP L S+ + T +E +G DRPGL ++ L+ L+ N+ +A + T +RA V
Sbjct: 821 APDL--SIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVF 878
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 205
+VTD TG I P R +TI+ + V G D A+ PPG
Sbjct: 879 YVTD-LTGTKITQPDRQATIRRAVMGVFEG--DAAAAR----PPG 916
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + IDN + TV+++ +++ G+L + L+ +NL I A++++ G +DVF V
Sbjct: 822 PDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT 881
Query: 75 DCDGKKI 81
D G KI
Sbjct: 882 DLTGTKI 888
>gi|254229487|ref|ZP_04922901.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|151937952|gb|EDN56796.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 301
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 97 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 156
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 157 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 216
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 217 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 276
Query: 168 G 168
G
Sbjct: 277 G 277
>gi|222642143|gb|EEE70275.1| hypothetical protein OsJ_30424 [Oryza sativa Japonica Group]
Length = 473
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F +
Sbjct: 292 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLF-AV 350
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 351 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 409
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHV--TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V VH+ DHS+ S I + +
Sbjct: 410 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 461
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 462 NMLMGWDD 469
>gi|424033774|ref|ZP_17773185.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
gi|408873887|gb|EKM13070.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
Length = 874
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|255560331|ref|XP_002521182.1| amino acid binding protein, putative [Ricinus communis]
gi|223539629|gb|EEF41213.1| amino acid binding protein, putative [Ricinus communis]
Length = 214
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P ++ID ++ +DAT ++V ++ G L+ ++ L D+ L + K + ++G F +
Sbjct: 8 PVLLIDQDSDSDATSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFIT 67
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + ++S ++ + G+ E ++
Sbjct: 68 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKLDVDIATHIH 127
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 128 VKDDGPKRSLLYIETADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKDKFHVS--YRG 185
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ ++L N LR Y R+ +T
Sbjct: 186 AALN-----SSMSQVLVNCLRYY--LRRPET 209
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 24/214 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TS++ + DR G + L DL +V + T +T +G ++DP
Sbjct: 21 TSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFITRLDSGRKVEDPDM 80
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ + N L Y + ++ GI ER+L V+ A +
Sbjct: 81 LERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKLD-----------VDIAT-HIHV 128
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
K P+ ++L IE + DRP LL +++ + D+ V ++T A +F
Sbjct: 129 KDDGPKRSLLYIE---------TADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKDKF 179
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
++ + G ++S + ++ CL + R ++V
Sbjct: 180 HVSY-RGAALNSSMS-QVLVNCLRYYLRRPETDV 211
>gi|424039494|ref|ZP_17777859.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
gi|408892923|gb|EKM30271.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
Length = 874
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|343500492|ref|ZP_08738384.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|418477317|ref|ZP_13046450.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820208|gb|EGU55034.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|384575057|gb|EIF05511.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 873
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G + R K VI ++ LE P +++ V +PT+ +
Sbjct: 739 LDQNGDVVDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A AD ++ A+I T +RA + +T S G
Sbjct: 799 TLLEFVALDTPGLLATVGATFADSGVHLHAAKITTIGERAEDLFIITSESGG 850
>gi|365540549|ref|ZP_09365724.1| PII uridylyl-transferase [Vibrio ordalii ATCC 33509]
Length = 874
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L+ NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKIRDKE---VIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G I ++ +I ++ L T LR + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEESHPSLIKHLLNGLYTGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 790 FLPTKSNKRTLMEFVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GYAIKDPKRLSTIKELL 184
G ++ + T++E+L
Sbjct: 850 GKLSEEEE--CTLREIL 864
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+I+N+ TVI+V ++ G+L ++ VL+D++L I A++++ G +DVF V
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DCDGKKI----RDKEVIDYIQQ-RLETDASFAP 102
D GK+I R + + D +Q L+ DA AP
Sbjct: 894 DLVGKQILSEVRQRAIRDRLQSVMLDKDAPVAP 926
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE +G DRPGL E+ +VL+DL ++ +A + T ++A V +VTD G I R
Sbjct: 847 TVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTD-LVGKQILSEVR 905
Query: 177 LSTIKELLFNVL 188
I++ L +V+
Sbjct: 906 QRAIRDRLQSVM 917
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
VE + P+V + N + TVI + +DRP LL+++ L+D+ + V T +A
Sbjct: 827 VEAFAVEPEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKA 886
Query: 292 YQEFYIRHVDGLPISSEAERERVIQ 316
FY+ + G I SE R+R I+
Sbjct: 887 VDVFYVTDLVGKQILSEV-RQRAIR 910
>gi|384920430|ref|ZP_10020438.1| PII uridylyl-transferase [Citreicella sp. 357]
gi|384465698|gb|EIE50235.1| PII uridylyl-transferase [Citreicella sp. 357]
Length = 920
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 108 VGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+ + P E+ T + F +D PG+F+ + L+ + NVV+A +T D A V
Sbjct: 718 IDIHPDEDRDATRVCFALSDHPGIFARLAGALSLVGANVVDARTFTSKDGFATAVFWIQD 777
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
G ++ RL +++++ L G R+A I +R R +++
Sbjct: 778 MDGTPFEE-SRLPRLRDMIRKTLWGEVKPREA--------IHSRLR-----------FKK 817
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
E+A S P + E YT+I + ++DRP LL+D+ TL++ + +
Sbjct: 818 RERAF-------SVPTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAV 870
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ T + FY++ + GL + ++++ + L AIE
Sbjct: 871 IATYGEQVVDTFYVKDMFGLKFFTPSKQKTLEHRLRDAIE 910
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 825 PTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K ++ RL
Sbjct: 885 KDMFGLKFFTPSKQKTLEHRL 905
>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 292
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 30/177 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E++ + IQ E+ A A + ++ GV+P ++ H
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLA--MGAAFGVVPPKQQVDVDIATH 203
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
+++ G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 204 INVQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAKAKFHVS 260
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
++ T +E T DR G + L +L NVV A ++ + +T TG + D
Sbjct: 96 QDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSITKADTGRKVDD 155
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGR 232
P+ L I+ + N L Y A+ ++ G++ ++++
Sbjct: 156 PELLEAIRLTIINNLIQYHPESSAQLAMGAAFGVVPPKQQV------------------- 196
Query: 233 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
D + V + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 197 --DVDIATHINVQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAK 254
Query: 293 QEFYIRH 299
+F++ +
Sbjct: 255 AKFHVSY 261
>gi|226530840|ref|NP_001151043.1| ACT domain containing protein [Zea mays]
gi|195643854|gb|ACG41395.1| ACT domain containing protein [Zea mays]
Length = 273
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 128
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPT--------EEHTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P H +
Sbjct: 129 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 187
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 241
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S+ ++L N LR Y R+ +T
Sbjct: 242 -YRGAKLNSSSSQVLINCLRYY--LRRPET 268
>gi|260775287|ref|ZP_05884184.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608468|gb|EEX34633.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 873
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSRDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ + R K VI ++ L+ P +++ V +PT+ +
Sbjct: 739 LDQHGQAVHESRHKAVIKHLAHVLKDGRPTKIKTRRVPRNLQHFKVKTRVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T G
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLDLHLHAAKITTIGERAEDLFIITSEQGG 850
>gi|262276529|ref|ZP_06054338.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
gi|262220337|gb|EEY71653.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
Length = 873
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I N T I V S +K + +V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLVLISKNATRGGTEIFVYSEDKPSLFARVVAALDKRNLSVHDAQIMTSKDGFALDTFMV 739
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASF------AP------SLRSSVGVMPTE--EH 116
+D + + I R + + + + L + + AP +++ V +PT
Sbjct: 740 LDANNEAIQPDRHDRIRESVAEALMQEGAITIPVKRAPRKLMAFKVKTQVNFLPTRIGRR 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E D PGL ++V AV A ++ A+I T +RA VTD A+ D +
Sbjct: 800 TLLELIALDTPGLLAKVGAVFAREGVSLQAAKITTIGERAEDFFIVTD-GERQALTDEAQ 858
Query: 177 LSTIKELLFNVL 188
+++K LF+ L
Sbjct: 859 -TSLKNALFDAL 869
>gi|99080287|ref|YP_612441.1| PII uridylyl-transferase [Ruegeria sp. TM1040]
gi|99036567|gb|ABF63179.1| UTP-GlnB uridylyltransferase GlnD [Ruegeria sp. TM1040]
Length = 893
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 34/241 (14%)
Query: 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE--FTGTDRPGLFSEVCAVLADLHCNV 144
+D+ + E DA PS V + P E+ + F D PG+F+ + LA + NV
Sbjct: 673 VDFAEMLREIDALDDPSA-MLVRLHPDEDRDATRACFVMPDHPGIFARIAGALALVGANV 731
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPP 204
V+A +T D + G+ + RL ++ ++ LRG R A S
Sbjct: 732 VDARSYTTKDGFVTDAFWIQDADGHPF-EASRLPRLRSMIEKTLRGEVIARDALKSRDK- 789
Query: 205 GIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDR 261
I RER I FD+ D S YT+I + ++DR
Sbjct: 790 -IKKRERAFRVPTHITFDN--------------DGSD-----------IYTIIEVDTRDR 823
Query: 262 PKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321
P LL+D+ TL + + ++ T + FY++ + GL S ++++ + + L A
Sbjct: 824 PGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFGLKYHSASKQQSLEKKLREA 883
Query: 322 I 322
I
Sbjct: 884 I 884
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND---RAAAVVHVTDHSTGYAIKDPKRL 177
F D PG+F + LA + NVV+A +T D AA + +D T Y D RL
Sbjct: 736 FALVDHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAFWIQDSD-DTPY---DEDRL 791
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVE 234
+++++ L G R A T I RER I FD+ E
Sbjct: 792 PRLRKMIERTLAGDILPRDALTDRDK--IKKRERAFKVPTHITFDNDGSE---------- 839
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
YT+I + ++DRP LLFD+ +L + + ++ T +
Sbjct: 840 ---------------IYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDT 884
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIER 324
FY++ + GL SE++++ + + L AIE+
Sbjct: 885 FYVKDMFGLKFYSESKQKTLERKLRDAIEQ 914
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYV 887
Query: 74 IDCDG--------KKIRDKEVIDYIQQRLE 95
D G +K ++++ D I+Q +E
Sbjct: 888 KDMFGLKFYSESKQKTLERKLRDAIEQGVE 917
>gi|297810567|ref|XP_002873167.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319004|gb|EFH49426.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRSLKDLGLDVIKGTVSTEGDVKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + + S ++ + G+ E ++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPENKIDVDIATHIL 214
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|215687047|dbj|BAG90893.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 271
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F +
Sbjct: 90 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLF-AV 148
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 149 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 207
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHV--TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V VH+ DHS+ S I + +
Sbjct: 208 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 259
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 260 NMLMGWDD 267
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 450 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 508
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + IK L +V+ G
Sbjct: 509 APTRQAAIKSALTHVMAG 526
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 75 DCDGKKI 81
D G +I
Sbjct: 501 DLLGAQI 507
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 904 APTRQAAIKSTLLHLL 919
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 26/202 (12%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+VG P T + D P L S + A N+V+A+I+T D A
Sbjct: 728 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 787
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
+ +R + I E + VL G K L P + R R Q
Sbjct: 788 YERDEDEARRATRIGETIEQVLEG-------KLKL-PDAVARRTTRGKQ----------- 828
Query: 227 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
KA S P+VT+ N + YTVI + DRP LL+++ ++ + + V
Sbjct: 829 HKAF------SVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVA 882
Query: 286 TGRTEAYQEFYIRHVDGLPISS 307
T A FY+ + G IS+
Sbjct: 883 TFGERARDVFYVTDLLGAQISA 904
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 179 TIKELLFNVLRG 190
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI I I+ RL
Sbjct: 893 TDLTGQKIDSPARIATIRNRL 913
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L S + A N+V+A+I+T +D A + + +R
Sbjct: 736 TEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILISREFDRDEDERRR 795
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ L+ +VL G S P I R + R +V K R E +
Sbjct: 796 AERVGRLIEDVLSG--------KSWLPEMIEKRTK--------PRRGSKVFKIPPRAEIR 839
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
++ + ++VI + DRP LL +I TL+D+ + + T + FY
Sbjct: 840 NA--------LSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFY 891
Query: 297 IRHVDGLPISSEAE----RERVIQCLEAAIERRAS 327
+ + G I S A R R+I LE A R
Sbjct: 892 VTDLTGQKIDSPARIATIRNRLIATLEGAAPERGG 926
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
R +G + + +E G DRPGL SE+ L+DL ++ +A I T ++ +VTD
Sbjct: 833 RVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTD 892
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLR-GYDDFRKAKT 199
TG I P RL TI++ L L G + K KT
Sbjct: 893 -LTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKT 927
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L S + + N+V+A+I+T A + + + +R
Sbjct: 734 TEITVFAPDHPRLLSIIAGACSAAGANIVDAQIFTTTHGRALDTILISREFDFDADERRR 793
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I +L+ +VL G S P I R + R + + V RVE
Sbjct: 794 AERIGKLIEDVLSG--------KSYLPEMIEKRAK--------PRRGTKAFRVVPRVEIG 837
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
++ + ++V+ +R DRP LL ++ TL+D+ + + T + FY
Sbjct: 838 NT--------LSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFY 889
Query: 297 IRHVDGLPISS----EAERERVIQCLEAAIERRA 326
+ + G I S E R+ ++Q LE+ +ER A
Sbjct: 890 VTDLTGQKIVSPDRLETIRKTLLQTLESGVERPA 923
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +V++V +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 892 DLTGQKIVSPDRLETIRKTL 911
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P +VI+N TVI+V ++ G+L ++ L+D++L I A++++ G +DVF V
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DCDGKK----IRDKEVIDYIQQ-RLETDASFAP 102
D GK+ +R + + D +Q L+ DAS AP
Sbjct: 894 DLTGKQVVSEVRQRTIRDRLQTILLDNDASVAP 926
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E T IE +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD TG +
Sbjct: 843 SERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD-LTGKQVV 901
Query: 173 DPKRLSTIKELLFNVL 188
R TI++ L +L
Sbjct: 902 SEVRQRTIRDRLQTIL 917
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
VE + P++ + N + + TVI + +DRP LL+++ L+D+ + V T +A
Sbjct: 827 VEAFAVEPEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKA 886
Query: 292 YQEFYIRHVDGLPISSEAERERVIQ 316
FY+ + G + SE R+R I+
Sbjct: 887 VDVFYVTDLTGKQVVSEV-RQRTIR 910
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 904
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 905 APTRQAAIKSALLHLL 920
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+VT+ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|359483143|ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
gi|298204773|emb|CBI25271.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ +AT++++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ H S
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ + D++ +V + E T A A HV+ G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVSYR--G 262
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
AI P ++++L N LR +
Sbjct: 263 KAIIKP-----LQQVLGNSLRYF 280
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN TV++V+ ++ G+L ++ + L V + I A IS+ G F+DVF +
Sbjct: 852 PPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYL 911
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K ++ I++ L
Sbjct: 912 KDVFGLKVDSKSKLEDIRRAL 932
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 29/216 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + TD PGLFS + +A NVV+A I+T ++ A + A P R
Sbjct: 754 TEVTVYATDHPGLFSRISGAMAATGANVVDARIFTLSNGMALDTFLIQDEDRLAFDRPDR 813
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++ + + L G KA + P GR
Sbjct: 814 IAKLVSAIERALSGALRVDKALEARKP------------------------TLGGRTRAL 849
Query: 237 SSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N +TV+ + +D P +L+ + L + + ++T F
Sbjct: 850 KIPPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVF 909
Query: 296 YIRHVDGLPISSEAE----RERVIQCLEAAIERRAS 327
Y++ V GL + S+++ R +++ L AA ++A+
Sbjct: 910 YLKDVFGLKVDSKSKLEDIRRALMKALGAAEAKKAA 945
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD--- 173
T + F D PG+FS + LA NVV+A +T D A V + G +D
Sbjct: 707 TRVCFALQDHPGIFSRLTGALALSGANVVDARTFTTRDGYATAVFWIQDADGAPYEDVRI 766
Query: 174 PKRLSTIKELLFN------VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
P+ TI++ L ++ D ++K + + P I FD+ E
Sbjct: 767 PRLRETIRKTLTGEVVAREAVKSRDKYKKRERAFKVPT---------HITFDNEGSE--- 814
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
+T+I + ++DRP LL+D+ L + ++ T
Sbjct: 815 ----------------------IFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATY 852
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ FY++ + GL + S+ +R+ + + L A++ A
Sbjct: 853 GEQVVDTFYVKDMFGLKLHSKTKRDLIEKKLRLAMQEGA 891
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+Y K R P + DN T+I+VD+ ++ +L + +VL N+ I A I+
Sbjct: 791 DKYKKRERAFKVPTHITFDNEGSEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIA 850
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+ G +D F V D G K+ K D I+++L
Sbjct: 851 TYGEQVVDTFYVKDMFGLKLHSKTKRDLIEKKL 883
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 11 RMNPPRV---VIDNNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
RM RV VI NN+ +D TVI+V +++ G+L + + + +NL I A+IS+ G
Sbjct: 834 RMKAFRVASDVIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGER 893
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
+DVF V D G+KI + D I++RL P S VM T
Sbjct: 894 VVDVFYVTDLTGQKIANVGRQDVIRERLRDAVEGRPEAGSGALVMQT 940
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE TG DRPGL ++ +A L+ N+ +A I T +R V +VTD TG I
Sbjct: 851 SDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTD-LTGQKIA 909
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+E L + + G
Sbjct: 910 NVGRQDVIRERLRDAVEG 927
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDG------K 79
AT I + + ++ G+ + Q + + + A +++ G +DVF V D G +
Sbjct: 677 ATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQDGAGLPYGQAE 736
Query: 80 KIRDKEVIDYIQQ--RLETDASFAPS-----LRSSVGVMP--------TEEHTSIEFTGT 124
R K ++D +++ R E S AP+ +++ V P +E T +E +G
Sbjct: 737 PRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHASETATVVEVSGA 796
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL + + V +D N+ +A + ++ +RA +V D G I +R++ ++ L
Sbjct: 797 DRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVD-GKGRKITSEQRIAELRTAL 855
Query: 185 FNVL 188
VL
Sbjct: 856 EAVL 859
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 31/240 (12%)
Query: 90 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
+Q+ +T A+ + + V +P + T I DRPGLF+++ +A L +V +A +
Sbjct: 652 VQRARQTGAAAQAAPLTPVEGLPVQA-TEISIAAADRPGLFADLAQTMAALGADVTDARV 710
Query: 150 WTHNDRAAAVVHVTDHSTG--YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
T ++ V G Y +P+RL + + L RG + + S +P
Sbjct: 711 ATTSEGVVLDVFRVQDGAGLPYGQAEPRRLKALVDALEKAARG-----EGRISKAPAPAG 765
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLF 266
N + ++ RP V V + + TV+ + DRP LL
Sbjct: 766 NARKAAFEV----------------------RPVVMVDHHASETATVVEVSGADRPGLLA 803
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ +D + V + A FY+ G I+SE + LEA ++ RA
Sbjct: 804 ALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGRKITSEQRIAELRTALEAVLDSRA 863
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++D++ ATV++V ++ G+L + +V +D L I+ A+++S G +D F V+
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ I ++ LE
Sbjct: 836 DGKGRKITSEQRIAELRTALEA 857
>gi|350532167|ref|ZP_08911108.1| PII uridylyl-transferase [Vibrio rotiferianus DAT722]
Length = 874
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSETGG 850
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Query: 15 PRVVIDNNTC---ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
P ++I T A AT I V S N+ + + L+ +NL I+ A I SS G+ +D
Sbjct: 725 PLILIKKTTSKELAGATQIFVYSKNQKNVFVAAATALSLLNLSIQDAKIYSSKSGYTIDT 784
Query: 71 FNVIDCDGKKIRDKE-VIDYIQQRLETDASFAPSLRSSVG----------VMPTEEHTS- 118
F V++ +G+ + + + ++ IQQ L + S + R +G PT S
Sbjct: 785 FFVLNENGEPLGNNQTLLKKIQQGLMEELSLVDNYRDVIGRRTPRRLKYFASPTRTSLST 844
Query: 119 --------IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+E DRPGL + + + D ++NA+I T +R + + D+
Sbjct: 845 DTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADN 899
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P R + +T + +V++V S ++ G+L + ++ D ++ + A I++ G D+F
Sbjct: 836 SPTRTSLSTDTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFF 895
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
+ D DGK + D + + +QQ +
Sbjct: 896 IADNDGKPLGDVALCEKLQQEI 917
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 5 YAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
Y + +R ++ PPRVVIDN TVI+V+ ++ G+L V + + + L I A+I++
Sbjct: 851 YGRRMRAIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTY 910
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
G +DVF V D G K++D++ + +++
Sbjct: 911 GIRAVDVFYVKDVFGLKVQDRKRLSIVRE 939
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 30/234 (12%)
Query: 93 RLETDA--SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
RL TDA + AP L +P T + D PGLFS++ LA ++V+A I
Sbjct: 736 RLITDAHKTEAP-LTIRTYPLPDRGVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIH 794
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
T + + DP RL I EL+ L G D K R
Sbjct: 795 TLTNGMVLDTFWIQDAAQDVFDDPHRLERIIELINTALAGTVDIEK------------RL 842
Query: 211 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIV 269
+ ++ M Y R +A+ P+V + N +TVI + +DR LL+D+
Sbjct: 843 QECNRHML----YGRRMRAI------HVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVT 892
Query: 270 CTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLE 319
T+ + + + + T A FY++ V GL + RE +++ LE
Sbjct: 893 KTIKEQKLQISSAHITTYGIRAVDVFYVKDVFGLKVQDRKRLSIVREAILKVLE 946
>gi|126739156|ref|ZP_01754850.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
gi|126719773|gb|EBA16481.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
Length = 913
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 42/249 (16%)
Query: 87 IDYIQQRLETDASFAPSLRSSVGVM----PTEEHTSIE--FTGTDRPGLFSEVCAVLADL 140
ID+ + E DA P GV+ P E+ + FT D PG+F+ V LA +
Sbjct: 693 IDFAEMLRELDAKNDPG-----GVVIRLDPDEDRDATRACFTMWDHPGIFARVSGALALV 747
Query: 141 HCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 200
NVV+A +T D + G+ + RL + +++ L+G R A S
Sbjct: 748 GANVVDARSYTTKDGYVTDAFWIQDAEGHPF-EASRLKRLSQMIRKTLKGEVIARDALVS 806
Query: 201 LSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMR 257
I RE+ I FD+ E YT+I +
Sbjct: 807 RDK--IKKREKAFRVPTHITFDNEGSE-------------------------IYTIIEVD 839
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
++DRP LL+D+ +L + + ++ T + FY++ + GL S ++++ + +
Sbjct: 840 TRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFGLKYHSLSKQKTLEKR 899
Query: 318 LEAAIERRA 326
L AI A
Sbjct: 900 LREAISEGA 908
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 820 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K +++RL
Sbjct: 880 KDMFGLKYHSLSKQKTLEKRL 900
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E +G DRPGL E+ L+ L+ N+ +A + T +R V +VTD TG I
Sbjct: 929 SSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTD-LTGTKIT 987
Query: 173 DPKRLSTIKELLFNVLRG 190
P R +TI+ + V G
Sbjct: 988 QPDRQATIRRAVMGVFEG 1005
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + IDN + TV+++ +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 920 PDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVT 979
Query: 75 DCDGKKI 81
D G KI
Sbjct: 980 DLTGTKI 986
>gi|388602519|ref|ZP_10160915.1| PII uridylyl-transferase [Vibrio campbellii DS40M4]
Length = 874
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE-- 114
V+D GK I R V +I LE P+ +++ V +PT+
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 797 KRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|444424960|ref|ZP_21220409.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241745|gb|ELU53265.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 874
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE-- 114
V+D GK I R V +I LE P+ +++ V +PT+
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 797 KRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|326503086|dbj|BAJ99168.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505920|dbj|BAJ91199.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DCD-GKKIRDKEVID-----YIQQRLE--TDASFAPSLRSSVGVMPTEE------HTSIE 120
G+KI D E+++ I LE +AS ++ ++ G+ P E T IE
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 121 F------------TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++AD++ V + E T A A HV+
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS----- 246
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 247 --YRGKPLIKALQQVLANSLRYF 267
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 83 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 142
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTS------LSPPG-IMNRERRLHQIMFDDRDYERVE 227
+ L ++ + N + Y ++ + L PP +++ + H ++DD
Sbjct: 143 ELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDD------- 195
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+ ++L +E S DRP LL D+V + D+ V G +T
Sbjct: 196 -----------GPERSLLVVE---------SADRPGLLVDLVKIIADINITVQSGEFDTE 235
Query: 288 RTEAYQEFYIRH 299
A +F++ +
Sbjct: 236 GLLAKAKFHVSY 247
>gi|260767827|ref|ZP_05876762.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
gi|260617336|gb|EEX42520.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
Length = 874
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L+ NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G+ I R K + ++ LE R + V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +EF D PGL + V A A+LH ++ A+I T +RA
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERA 838
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD E I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNNWTLNTFIVLDNVGQPIRDLERIEEMRQHLVEELDDPDDYP 788
Query: 98 ---ASFAPSLRSSVGVM--------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
+ P V P E T +E T DRPGL + V + + +
Sbjct: 789 DIVSRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T+ G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITN-KAGEPLTDPERQQQLRERLIEVL 889
>gi|375130169|ref|YP_004992269.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
gi|315179343|gb|ADT86257.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
Length = 874
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L+ NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G+ I R K + ++ LE R + V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +EF D PGL + V A A+LH ++ A+I T +RA
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERA 838
>gi|357145299|ref|XP_003573594.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 281
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 75 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 134
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
G+KI D E+++ ++ + ET + A + ++ G+ P E ++
Sbjct: 135 KSSTGRKIDDPELLEAVRLTIINNMLEYHPETSSQLA--MGATFGIEPPTEVVDVDIATH 192
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++AD++ V + E T A A HV+
Sbjct: 193 IDIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS--- 249
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 250 ----YRGKPLIKALQQVLANSLRYF 270
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 86 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 145
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLS-------PPGIMNRERRLHQIMFDDRDYERVE 227
+ L ++ + N + Y ++ ++ P +++ + H ++DD
Sbjct: 146 ELLEAVRLTIINNMLEYHPETSSQLAMGATFGIEPPTEVVDVDIATHIDIYDD------- 198
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+ ++L +E S DRP LL D+V + D+ V G +T
Sbjct: 199 -----------GPERSLLVVE---------SADRPGLLVDLVKIIADINITVQSGEFDTE 238
Query: 288 RTEAYQEFYIRH 299
A +F++ +
Sbjct: 239 GLLAKAKFHVSY 250
>gi|389792807|ref|ZP_10195989.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
gi|388435671|gb|EIL92568.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
Length = 877
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V +L+ + + +A I SS G MD F +
Sbjct: 684 PLVAVHPMSVRGSTELFVCTPDRDGLFASVTAMLDRLRFSVMEARILSSPKGMAMDTFLL 743
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
++ D ++ + + +QQRL+ +L S GV P++
Sbjct: 744 LEADSQQPANTVRAEELQQRLQR------ALTLSTGVQPSKRSMSRHQRHFQTAPKISFD 797
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST---G 168
+ T + GTDRPGL + V V+ D V +A I T +R ++D G
Sbjct: 798 DAGDRTQLALVGTDRPGLLAAVAQVILDAGARVHDARIATFGERVEDFFLLSDRHNAPLG 857
Query: 169 YAIKD 173
A++D
Sbjct: 858 PALRD 862
>gi|115480793|ref|NP_001063990.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|52076090|dbj|BAD46603.1| unknown protein [Oryza sativa Japonica Group]
gi|113632223|dbj|BAF25904.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|215700991|dbj|BAG92415.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F V
Sbjct: 246 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAV- 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 305 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 363
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHV--TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V VH+ DHS+ S I + +
Sbjct: 364 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 415
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 416 NMLMGWDD 423
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IEF DR G + A L +L N+ A+I A ++TD T I RL
Sbjct: 93 TIEFG--DRLGQLLDTIAALKNLKLNIRRAKI--KAGAGANKFYITDALTSEKILKSARL 148
Query: 178 STIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
I+ +FN L Y A S SP + LH + RD +++ +V
Sbjct: 149 EEIRLTIFNNLLKYHPESGAAIGWGASASP---VTEADPLHPL--GTRDTPKIKTSVEVS 203
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
E++S ++ +++R++DRP LL DIV TL D+ V V+T A
Sbjct: 204 EEESG-----------THSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKD 252
Query: 294 EFYIRHVDGLPIS 306
EFY+ + G P++
Sbjct: 253 EFYVTY-HGEPLN 264
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN ATV+ ++ ++ G LL I L ++ L I++A I + G + F +
Sbjct: 77 PIVKIDNQHDPFATVVTIEFGDRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYIT 134
Query: 75 DC-DGKKIRDKEVIDYIQQRL---------ETDASFA----------------------P 102
D +KI ++ I+ + E+ A+ P
Sbjct: 135 DALTSEKILKSARLEEIRLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRDTP 194
Query: 103 SLRSSVGVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
+++SV V E H+ + DRPGL +++ L D+ NV++AE+ T A
Sbjct: 195 KIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEF 254
Query: 161 HVTDHS 166
+VT H
Sbjct: 255 YVTYHG 260
>gi|156975508|ref|YP_001446415.1| PII uridylyl-transferase [Vibrio harveyi ATCC BAA-1116]
gi|166232255|sp|A7N1X9.1|GLND_VIBHB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156527102|gb|ABU72188.1| hypothetical protein VIBHAR_03239 [Vibrio harveyi ATCC BAA-1116]
Length = 874
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID + DATV++V ++ G LL + L ++ L + KA + D + F++
Sbjct: 74 PKVIIDQDADPDATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSIT 133
Query: 75 DCD-GKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE--------- 115
G+K+ D E+++ I Q E+ + A + + GV P ++
Sbjct: 134 KASTGRKVDDPELLEAIRLTIINNLLQYHPESSSQLAMGI--AFGVEPPKQVDVDIATRV 191
Query: 116 -------HTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
S+ F DRPGL ++ + D++ V + E T A A HV+
Sbjct: 192 KVKEDSPDRSLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKAKFHVS--YK 249
Query: 168 GYAIKDPKRLSTIKELLFNVLRGY 191
G AI P +L +L N LR +
Sbjct: 250 GKAISKPLQL-----VLANSLRYF 268
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T STG + DP
Sbjct: 85 DATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSITKASTGRKVDDP 144
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG-RV 233
+ L I+ + N L Y ++ ++ I F ++V+ + RV
Sbjct: 145 ELLEAIRLTIINNLLQYHPESSSQLAMG-------------IAFGVEPPKQVDVDIATRV 191
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ K P ++L +E + DRP LL D+V +TD+ V G +T A
Sbjct: 192 KVKEDSPDRSLLFVE---------AADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKA 242
Query: 294 EFYIRH 299
+F++ +
Sbjct: 243 KFHVSY 248
>gi|320155590|ref|YP_004187969.1| (Protein-PII) uridylyltransferase [Vibrio vulnificus MO6-24/O]
gi|319930902|gb|ADV85766.1| [Protein-PII] uridylyltransferase [Vibrio vulnificus MO6-24/O]
Length = 873
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSV 108
G+ +D F V+D G+ I K VI ++ L TD +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVL-TDGRPTKVKTRRTPYKLQHFKVKTKV 788
Query: 109 GVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T +
Sbjct: 789 DFLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSEN 848
Query: 167 TGYAIKDPKRLSTIKELLFNV 187
G + + + L ++L+ N+
Sbjct: 849 GG-RLSEEQELQLREKLIHNI 868
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRS--SVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
G + V++ Q ++ T A P +VGV + + DRPGLFS
Sbjct: 557 GSAPLPEPVLEPTQPQVTTPAPSVPGQTGPVTVGVEDVLDGQQVTIGAADRPGLFSLCAG 616
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHST-GYAIKDPKRLSTIKELLFNVLRGYDDF 194
VLA +V RAA V H T +A++ + E+L D
Sbjct: 617 VLALNQLDV----------RAARVSVQDGHGTLVFAVRPRFGRPPVPEIL------ADGV 660
Query: 195 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYT-- 252
R A P G R+R +RDY + +++ GR P+++ + E T
Sbjct: 661 RAALEGTLPLGERLRQR--------ERDYSQ-DRSPGRP------PRISWFDAEATGTTG 705
Query: 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 312
++ +R+ DR LL + L D V V T +A FY+ G PI + +RE
Sbjct: 706 LVEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDPD-QRE 764
Query: 313 RVIQCLEAAI 322
R + L AA+
Sbjct: 765 RAERALVAAV 774
>gi|83944326|ref|ZP_00956781.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
gi|83844870|gb|EAP82752.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
Length = 927
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 742 FVMADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY-DVSRLPRL 800
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L+G R A S + RE+ I FD+ E
Sbjct: 801 RQMISKTLKGEILARDALKSRDK--VKKREKVFKVPTHITFDNEGSE------------- 845
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ +L++ + + ++ T + FY+
Sbjct: 846 ------------IYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL +E++++ + + L AAI
Sbjct: 894 KDMFGLKYYTESKQKTLEKRLRAAI 918
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 834 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + +++RL
Sbjct: 894 KDMFGLKYYTESKQKTLEKRL 914
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 29/237 (12%)
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+I +Q LE+ S L + P T + D PGLF V + N++
Sbjct: 700 LIHNVQHILESGDS---PLSIAAQYYPQRGATLVTVYAADHPGLFYRVAGAIHLAGGNII 756
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 205
+A I T D A + G A P++L I+ + + SLS
Sbjct: 757 DARIHTTRDGVAIDNFLVQDPLGGAFHSPEQLKRIRSAI-------------EDSLS--- 800
Query: 206 IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKL 264
NR R + ++ R R R+E P V + N + +TVI + ++DRP L
Sbjct: 801 --NRHRLITKLA--ARPLPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPAL 851
Query: 265 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321
LF + L + V V T A FYI + G I S+A + + + L AA
Sbjct: 852 LFSLANALFQSKVTVHSAHVATYGERAVDTFYITDLIGGKIESKARLQTLERRLLAA 908
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F +
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI K + +++RL A
Sbjct: 886 DLIGGKIESKARLQTLERRLLAAAG 910
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 903 APTRQAAIKRALVHLL 918
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
+R+ P P+V I+N T+I+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 77/204 (37%), Gaps = 29/204 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 738 TELTILAADHPWLLSIIAGACASAGANIVDAQIYTTTDGQALDTIAISREYERDEDEGRR 797
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG-RVED 235
+ I E++ VL G L P +M +A G R+
Sbjct: 798 AARIAEIIEQVLEG---------RLRLPDVMP------------------SRAAGKRLRP 830
Query: 236 KSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P+VT+ N D +T+I + DRP LLF + ++ + + V T A
Sbjct: 831 FVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDV 890
Query: 295 FYIRHVDGLPISSEAERERVIQCL 318
FY+ + G I++ + + + L
Sbjct: 891 FYVTDLLGARITAPTRQAAIKRAL 914
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
gi|81170627|sp|Q5LWE5.1|GLND_SILPO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56677049|gb|AAV93715.1| protein-P-II uridylyltransferase [Ruegeria pomeroyi DSS-3]
Length = 908
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 45/212 (21%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK----- 175
F D PG+FS + LA + NVV+A +T D +VTD + I+D +
Sbjct: 722 FAMADHPGIFSRMAGALALVGANVVDARSYTTKDG-----YVTD---AFWIQDAEGHPYE 773
Query: 176 --RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAV 230
RL + +++ L+G R A S I RE+ + I FD+ +
Sbjct: 774 AARLPRLSQMILKTLKGEVVARDALKSRDK--IKKREKAFNVPTHITFDNEGSD------ 825
Query: 231 GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
YT+I + ++DRP LL+D+ L + + ++ T +
Sbjct: 826 -------------------IYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQ 866
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
FY++ + GL SEA++ + L AI
Sbjct: 867 VVDSFYVKDMFGLKYHSEAKQRTLETKLRKAI 898
>gi|83953368|ref|ZP_00962090.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
gi|83842336|gb|EAP81504.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
Length = 927
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 742 FVMADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY-DVSRLPRL 800
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L+G R A S + RE+ I FD+ E
Sbjct: 801 RQMISKTLKGEILARDALKSRDK--VKKREKVFKVPTHITFDNEGSE------------- 845
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ +L++ + + ++ T + FY+
Sbjct: 846 ------------IYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL +E++++ + + L AAI
Sbjct: 894 KDMFGLKYYTESKQKTLEKRLRAAI 918
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 834 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + +++RL
Sbjct: 894 KDMFGLKYYTESKQKTLEKRL 914
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 903 APTRQTAIKRALVHLL 918
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
+R+ P P+V I+N T+I+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T ++ + + G+ I + R S + E L
Sbjct: 723 DIPGLFSMITGVMAANGINILGAQIHTSSNGKVLDILQVNSPQGFMIIEESRWSRVDEDL 782
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
VL G R A + R+R + +R R V + SS
Sbjct: 783 RQVLTG--KIRVASL------VAKRQR---PTLLTERPKPRFPSRVDIDNEVSS------ 825
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
DYTVI + + D+ LL+ I TLTD+ + ++T + FY++ + G
Sbjct: 826 -----DYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHK 880
Query: 305 ISSEAERERVIQCLEAAIER 324
I+S E + + L A+E+
Sbjct: 881 ITSVERLEEIREKLRVAVEQ 900
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L ++ L D+ L I A IS+ DVF V
Sbjct: 814 PSRVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYV 873
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI E ++ I+++L
Sbjct: 874 KDIFGHKITSVERLEEIREKL 894
>gi|37680743|ref|NP_935352.1| PII uridylyl-transferase [Vibrio vulnificus YJ016]
gi|62288143|sp|Q7MIF8.1|GLND_VIBVY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|37199492|dbj|BAC95323.1| protein-P-II uridylyltransferase [Vibrio vulnificus YJ016]
Length = 873
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSV 108
G+ +D F V+D G+ I K VI ++ L TD +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVL-TDGRPTKVKTRRTPYKLQHFKVKTKV 788
Query: 109 GVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T +
Sbjct: 789 DFLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSEN 848
Query: 167 TGYAIKDPKRLSTIKELLFNV 187
G + + + L ++L+ N+
Sbjct: 849 GG-RLSEEQELQLREKLIHNI 868
>gi|343492904|ref|ZP_08731251.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
gi|342826699|gb|EGU61113.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
Length = 873
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + S + + V L+ N I A + +S G+ +D F V
Sbjct: 679 PLVLLSKKPTRGGTEVFIYSPDLPNLFANVAGELDRRNFSIHDAQVMTSKDGYALDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPTE--EHT 117
+D GK I R V+ +Q L+ +S ++++ V +PT+ + T
Sbjct: 739 LDQHGKPIEENRHATVVKQLQSVLDETSSATKVRRTPRQLMHFNVKTKVDFIPTKTKKRT 798
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+EF D PGL + V A ADL+ N+ A+I T +RA + +T + G
Sbjct: 799 LMEFVALDTPGLLANVGATFADLNINLHAAKITTIGERAEDLFILTSPNGG 849
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPNHIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 TIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|27365205|ref|NP_760733.1| PII uridylyl-transferase [Vibrio vulnificus CMCP6]
gi|30173035|sp|Q8DBG3.1|GLND_VIBVU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|27361352|gb|AAO10260.1| protein-P-II uridylyltransferase [Vibrio vulnificus CMCP6]
Length = 873
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G+ +D F V+D G+ I K VI ++ L + P +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLADGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GYAIKDPKRLSTIKELLFNV 187
G + + + L ++L+ N+
Sbjct: 850 G-RLSEEQELQLREKLIHNI 868
>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]
Length = 453
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 33/207 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ +AT++++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ H S
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ + D++ +V + E T A A HV+ G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVS--YRG 262
Query: 169 YAIKDP--KRLSTIKELLFNVLRGYDD 193
AI P + +T K L G DD
Sbjct: 263 KAIIKPLQQNFNTTK---LGRLAGGDD 286
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L N+ +A + T +RA V +VTD TG +
Sbjct: 837 SSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVT 895
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + I++ + +V G
Sbjct: 896 QPDRQAAIRKAMLDVFAG 913
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV++V +++ G+L ++ ++L I A++++ G +DVF V
Sbjct: 827 PPDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 887 TDLTGTRV 894
>gi|88812375|ref|ZP_01127625.1| Protein-P-II uridylyltransferase [Nitrococcus mobilis Nb-231]
gi|88790382|gb|EAR21499.1| Protein-P-II uridylyltransferase [Nitrococcus mobilis Nb-231]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P ++ID + T + V + ++ I + LN + L I+ A I++D G +D + V
Sbjct: 696 PLILIDPISTRGGTEVFVYTRDRDHIFALTVTALNQLGLDIQDARIITTDDGHTLDSYLV 755
Query: 74 IDCDGKKI----RDKEVIDYIQQRLETDASFA-PSLRS--------------SVGVMPTE 114
++ GK I R++E+I+++ L PS R+ P
Sbjct: 756 LEDTGKPIAAGYREREIIEHLSTMLCPGKPLPQPSTRTLPRRLRHFSTQTQIEFTAEPHN 815
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNV--VNAEIWTHNDRAAAVVHVTD 164
+ T++E DRPGL ++V A +HC V NA+I T +RA V +TD
Sbjct: 816 DRTAMELITGDRPGLLAQVG--YAFVHCGVRLQNAKISTMGERAEDVFFLTD 865
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++D++ ATV++V ++ G+L + +V +D L I+ A+++S G +D F V+
Sbjct: 22 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 81
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ + ++ LE
Sbjct: 82 DRKGRKITSEQRVAELRAALEA 103
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E T +E +G DRPGL + + V +D N+ +A + ++ +RA +V D G I
Sbjct: 31 SETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDR-KGRKIT 89
Query: 173 DPKRLSTIKELLFNVL 188
+R++ ++ L VL
Sbjct: 90 SEQRVAELRAALEAVL 105
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 905 APTRQAAIKRALIHLLANGD 924
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + +T D G
Sbjct: 739 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDDDEG-- 796
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ ++L G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDILEG---------KLRLPEVVARR----------------ASGK 827
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+++ + P+V + N + YTVI + DRP LL+ + +++ + + V T
Sbjct: 828 GKLKPFTVEPEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGE 887
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G I++ + + + L
Sbjct: 888 RARDVFYVTDLLGAQITAPTRQAAIKRAL 916
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|262166338|ref|ZP_06034075.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
gi|262026054|gb|EEY44722.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
Length = 622
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 425 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 484
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 485 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 544
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + + +
Sbjct: 545 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEEEE 603
Query: 177 LSTIKELLFNVLR 189
++L+ NV R
Sbjct: 604 QLLREKLIENVAR 616
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I +S W ++ F V+D G+ IRD I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPGHIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 DIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDK- 84
AT + V + ++ + V+ L+ +NL I A + SS G+ +D F V+D G+ + D+
Sbjct: 719 ATEVFVYTPDRPNVFAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 85 ----EVIDYIQQRLETDASFA----------------PSLRSSVGVMPTEEHTSIEFTGT 124
++ + +Q+ L+ ++ PS ++ + P + ++++E T
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPS-QAHISTEPGDTYSTLEITSA 837
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRPGL + + + + NA+I T +R + H+TD S + D + T+++
Sbjct: 838 DRPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITD-SEDQPLADNALIETLQQ 894
>gi|83945035|ref|ZP_00957401.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
gi|83851817|gb|EAP89672.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
Length = 938
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLN--DVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
AT + V + ++H + + L+ N+V + +SDG F DVF V + GK
Sbjct: 730 ATEVMVLTPDRHALFADIAGALSREGANVVGAQVTTTSDGRAF-DVFYVQEQGGKPFGWS 788
Query: 85 EVIDYIQQRLE-------------------------TDASFAPSLRSSVGVMPTEEHTSI 119
+ YIQ RL +A+F + ++ + +++ I
Sbjct: 789 D--SYIQDRLRDAVQSAAEHGLSSKDARPMLKPLRRREAAFTVTPSVNLDLEASDDALVI 846
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TG DRPGL + L+D+ ++ A I + +RA +VT++ G+ RL+
Sbjct: 847 EATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVTEN--GHKPSGDARLAG 904
Query: 180 IKELLFNVLRGYDD---FRKAKTSL-SPPGIMNR 209
IK L NVL G ++ +AK L S P R
Sbjct: 905 IKVHLMNVLAGAEEAVAVHRAKQGLVSTPASAGR 938
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 78 GKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
G+ + +E+ + L TDA S AP + V + +T IE +G DR GL E+
Sbjct: 812 GEVVVSEELRARAKTHLPTDAFSVAPEV--VVDNSLSNVYTVIEVSGLDREGLLFELTNA 869
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
++ L+ N+ +A I T +RA +VTD TG I P+R + IK L +V G R
Sbjct: 870 ISRLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIASPQRQAAIKRQLLDVF-GGPGARG 927
Query: 197 AKT 199
AKT
Sbjct: 928 AKT 930
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN+ TVI+V +++ G+L ++ ++ +NL I A+I + G +D F V
Sbjct: 837 PEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT 896
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107
D G KI + I+++L D P R +
Sbjct: 897 DLTGAKIASPQRQAAIKRQL-LDVFGGPGARGA 928
>gi|121998250|ref|YP_001003037.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
gi|121589655|gb|ABM62235.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
Length = 889
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V+ + I + + + + + + L+ + L I+ A I++DGG+ +D + V
Sbjct: 690 PLVLAASQETGGGARIFLYAPDSRDLFARCVWALDRLGLSIQDARVITTDGGFTLDSYRV 749
Query: 74 IDCDGKKIRDKEVIDYIQQRL-----ETDASFAP----------SLRSSVGVM----PTE 114
++ G +++ ++ ++Q L E AP R+ + P
Sbjct: 750 LEQHGAPPSEEQRLEEVRQALAAAAAEQGPPPAPVARHIPRQLQHFRTETQIHFTDDPDN 809
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
T +E DRPGL + V + V NA+I T +RA V +TD G ++ P
Sbjct: 810 HRTVVELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITD-DQGQPLRLP 868
Query: 175 KRLSTIKELLFNVL 188
+ ++E L+ +L
Sbjct: 869 VQYRCVREALYELL 882
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T+ + + + G+ I + R + + L
Sbjct: 717 DIPGLFSMITGVMAANGMNILGAQIHTNTNEKVLDILQVNSPQGFVITEESRWARFETDL 776
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 243
VL G + P I+ E+ + V RVE +
Sbjct: 777 RQVLEGKVRVGQLVAKRHRPSILT---------------EKAKPTVPARVEIDN------ 815
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQ 873
Query: 304 PISSEAERERVIQCLEAAIE 323
IS A+ E + + L AA++
Sbjct: 874 KISEPAKLEEIRKELLAAVD 893
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 868 KDIFGQKISEPAKLEEIRKEL 888
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ +T +E TG DR GL E+ A L+ L+ N+ +A + T +R V +VTD G I
Sbjct: 852 SHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTD-LLGAQIT 910
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L + G ++ KA
Sbjct: 911 SPTRQAAIKRALIALFAGPNNESKA 935
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N T+++V +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 75 DCDGKKI 81
D G +I
Sbjct: 903 DLLGAQI 909
>gi|326509743|dbj|BAJ87087.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DCD-GKKIRDKEVID-----YIQQRLE--TDASFAPSLRSSVGVMPTEE------HTSIE 120
G+KI D E+++ I LE +AS ++ ++ G+ P E T IE
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 121 F------------TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL + ++AD++ V + E T A A HV+
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVGLVKIIADINITVQSGEFDTEGLLAKAKFHVS----- 246
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 247 --YRGKPLIKALQQVLANSLRYF 267
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 83 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 142
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTS------LSPPG-IMNRERRLHQIMFDDRDYERVE 227
+ L ++ + N + Y ++ + L PP +++ + H ++DD
Sbjct: 143 ELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDD------- 195
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+ ++L +E S DRP LL +V + D+ V G +T
Sbjct: 196 -----------GPERSLLVVE---------SADRPGLLVGLVKIIADINITVQSGEFDTE 235
Query: 288 RTEAYQEFYIRH 299
A +F++ +
Sbjct: 236 GLLAKAKFHVSY 247
>gi|259416431|ref|ZP_05740351.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
gi|259347870|gb|EEW59647.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
Length = 907
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 722 FVMPDHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDADGHPF-EASRLPRL 780
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+ ++ L G R A S I RER I FD+ D S
Sbjct: 781 RSMIEKTLHGEVIARDALKSRDK--IKKRERAFRVPTHITFDN--------------DGS 824
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 825 D-----------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYV 873
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL S A+++ + + L AI
Sbjct: 874 KDMFGLKYHSAAKQQSLEKKLREAI 898
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D +K
Sbjct: 905 APTRQAAIKRALIHLLADADAAQK 928
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + +T D G
Sbjct: 738 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDEDEG-- 795
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I +++ VL G L P ++ R R
Sbjct: 796 ----RRATRIGDMIEEVLEG---------KLRLPDVVAR---------------RATNGK 827
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+++ + P+V + N D YTVI + DRP LL+ + ++ + + V T
Sbjct: 828 GKLKPFTVEPEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 887
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G I++ + + + L
Sbjct: 888 RARDVFYVTDLLGAQITAPTRQAAIKRAL 916
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N+ TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 134/320 (41%), Gaps = 45/320 (14%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
+ T+I V+ +K G+ + +++ +L I +A +S+DG W VF V+ ++K
Sbjct: 18 GETTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVG------KEK 71
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGV---------MPTEEHTSIEFTGTDRPGLFSEVCA 135
+++RL + P+ S+ G + ++F DR GL +V
Sbjct: 72 TRWSLLKKRL---IAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTE 128
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTD-----HSTGYAIKDPKRLSTIKELLFNV-- 187
VL +L + ++ T D + + +TD H+ ++L+T+ E F
Sbjct: 129 VLCELELTIKKVKVSTTPDGKVLDLFFITDTRELLHTEKRKDDTIEKLTTVLEDFFTTID 188
Query: 188 --LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 245
L G + ++ S S P + +FD + +V V D + P
Sbjct: 189 IELVGPETTAFSQPSSSLPNAITD-------VFDLQSGTSTSDSVSIVMDNTLSPA---- 237
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRHVDGLP 304
+T++ + +D LL+DI+ TL D + +G + R + + +I VDG
Sbjct: 238 -----HTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLFIMQVDGKK 292
Query: 305 ISSEAERERVIQCLEAAIER 324
I +++E + L+ + R
Sbjct: 293 IVDPSKKESLSSRLKTELLR 312
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
+V+DN T++++ + G+L +++ L D N+ I S G +D+F ++
Sbjct: 228 IVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLF-IM 286
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + + RL+T+ P + V P + +E +G RP +F
Sbjct: 287 QVDGKKIVDPSKKESLSSRLKTEL-LRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFY 345
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV 162
++ L L + +AE+ H DR V V
Sbjct: 346 DITLALKMLGLCIFSAEVGRHVIGDRECEVYRV 378
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 25/202 (12%)
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
++ D PGLF+ + LA N++ A+I+T D A V + + +P
Sbjct: 682 TLTIAALDSPGLFATIAGALALHGLNILAADIFTWKDGTAVDV--------FTVGEPPEN 733
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
E+ V R R K ++ E RL D R+ K G
Sbjct: 734 LFPHEVWARVKRSIGYARVGK--------LDIESRLE----DRRNSPLTMKRPG----PR 777
Query: 238 SRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP VT+ N D YTVI + + DR LFD+ TL ++ + + T + A F+
Sbjct: 778 LRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFH 837
Query: 297 IRHVDGLPISSEAERERVIQCL 318
IR +G ++ A + V + L
Sbjct: 838 IRDTEGGKLTDSARLQAVHEAL 859
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 9 IRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
++R P P V IDN+ TVI+V + ++ G L + + L +++L I A I++ G
Sbjct: 771 MKRPGPRLRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKG 830
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
D+F++ D +G K+ D + + + L
Sbjct: 831 RAADIFHIRDTEGGKLTDSARLQAVHEAL 859
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 85/218 (38%), Gaps = 30/218 (13%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 714 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 773
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
G A P++L IK + + SLS NR R + ++ + R
Sbjct: 774 VQDPFGGAFHSPEQLGRIKAAI-------------EDSLS-----NRHRLITKL--EARP 813
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R R E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 814 LPRT-----RAEAFQIVPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 868
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319
V T A FY+ + G I S A +Q LE
Sbjct: 869 AHVATYGERAVDTFYVTDLLGGKIESRAR----LQTLE 902
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + + +++RL
Sbjct: 886 DLLGGKIESRARLQTLERRL 905
>gi|386818050|ref|ZP_10105268.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
gi|386422626|gb|EIJ36461.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
Length = 879
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFN 72
P + + + V+ V S ++ + +V+ L +NL V++ +S+ G+ + +
Sbjct: 685 PTLIHLRRTVSGSSNVLFVYSKDQDDLFSRVVSTLEQLNLNVVQARIVSTTDGFDLYTLH 744
Query: 73 VIDCDGKKI---RDKE-VIDYIQQRLETDASFAPSLRS-------------SVGVMPTEE 115
++ D + I D++ +ID ++ LE D S +LR S P +
Sbjct: 745 ILGPDNQLIISDADRQYIIDTLEANLERDISRQAALRKPRILRNFDVPTRVSFNQQPDKN 804
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T IE D PGL S + + L V NA I T ++A + +VT G I D
Sbjct: 805 LTLIEINTGDMPGLLSRLGEAMDGLGIRVHNARINTLGEQAQDIFYVTARD-GSMITDET 863
Query: 176 RLSTIKELLFNVLRG 190
+ + I+E+L L+G
Sbjct: 864 QQAHIREVLVQALKG 878
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 99 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V++ N+ + TV++V +++ G+L + ++ +NL I A++ + G +DVF V D
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 DGKKIRDKEVIDYIQQRLE 95
G+K+ + + I+ RL+
Sbjct: 899 TGQKVHNVGRQESIRDRLK 917
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 99 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V++ N+ + TV++V +++ G+L + ++ +NL I A++ + G +DVF V D
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 DGKKIRDKEVIDYIQQRLE 95
G+K+ + + I+ RL+
Sbjct: 899 TGQKVHNVGRQESIRDRLK 917
>gi|397676406|ref|YP_006517944.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397095|gb|AFN56422.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 926
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ + MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVTGHEMPAYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH-----------VE------------PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 36/227 (15%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 571 RSLVVASETEDSWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 628
Query: 165 ----HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
G+A K + L+ +L H++
Sbjct: 629 VRATDGLGFAEKGWRSLNEQLDLAIE---------------------------HRMGLSH 661
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
R Y ++ GR ++ V+ ++Y+VI + + D P L+ I ++ D
Sbjct: 662 RLYRKLSSGYGRRSQRAGEVASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGL 721
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+ + T + FY+ G + E R+ V Q + +I+R
Sbjct: 722 NIHKAYIATELEQLIDVFYVLDSRGQKLVDEDFRQEVTQGILHSIDR 768
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
+VVIDN + + +VI+V + + G L + Q + D L I KAYI+++ +DVF V
Sbjct: 682 ASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYV 741
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
+D G+K+ D++ + Q
Sbjct: 742 LDSRGQKLVDEDFRQEVTQ 760
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 556 SSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVM 614
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 615 QPDRLAMIRAAVMEVF 630
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 546 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 605
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 606 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 639
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 862 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 920
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 921 APTRQAAIKRALIHLLANGDAAEK 944
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 26/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 755 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 814
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ I + + VL G L P +M R + R++
Sbjct: 815 ATRIGDTIEQVLEG---------KLRLPDMMARR----------------TASKTRLKPF 849
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S P+V++ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 850 SVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 909
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y+ + G I++ + + + L
Sbjct: 910 YVTDLLGAQITAPTRQAAIKRAL 932
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 845 RLKPFSVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 904
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 905 ARDVFYVTDLLGAQI 919
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVM 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 913
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
+ PPRV I + ATV++V + ++ G+L ++ Q + L + KA + + G +DVF
Sbjct: 693 VPPPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVF 752
Query: 72 NVIDCDGKKIRDKEVIDYIQQRL 94
V+D G+ +R+ + +++++
Sbjct: 753 YVVDAQGRPLREPAALSALREKV 775
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 26/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 736 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 795
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ I + + VL G L P +M R + R++
Sbjct: 796 ATRIGDTIEQVLEG---------KLRLPDVMARR----------------TASKTRLKPF 830
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+VT+ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 831 IVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 890
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y+ + G I++ + + + L
Sbjct: 891 YVTDLLGAQITAPTRQAAIKRAL 913
>gi|352086340|ref|ZP_08953881.1| UTP-GlnB uridylyltransferase, GlnD [Rhodanobacter sp. 2APBS1]
gi|351679639|gb|EHA62776.1| UTP-GlnB uridylyltransferase, GlnD [Rhodanobacter sp. 2APBS1]
Length = 877
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + V++ +SS G +D F +
Sbjct: 684 PLVAVHPLSVRGSTELFVYTPDRDGLFATVTAVLDRLRFSVMESRILSSPTGMALDTFLL 743
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
+D D ++ + +QQRL+ +L S GV P++
Sbjct: 744 LDADSQQPVSAARAEELQQRLQR------ALVQSAGVQPSKRGLSRHQKHFQMTPQISFH 797
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T + GTDRPGL + V V+ V +A I T +R +TD
Sbjct: 798 AAGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTD 850
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 26/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 736 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 795
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ I + + VL G L P +M R + R++
Sbjct: 796 ATRIGDTIEQVLEG---------KLRLPDVMARR----------------TASKTRLKPF 830
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+VT+ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 831 IVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 890
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y+ + G I++ + + + L
Sbjct: 891 YVTDLLGAQITAPTRQAAIKRAL 913
>gi|110678517|ref|YP_681524.1| PII uridylyl-transferase [Roseobacter denitrificans OCh 114]
gi|109454633|gb|ABG30838.1| protein-P-II uridylyltransferase [Roseobacter denitrificans OCh
114]
Length = 935
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F +D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 750 FVMSDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAFWIQDADGNPY-DATRLPRL 808
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L G + + S + RER I FD+ E
Sbjct: 809 RKMIERTLMG--EVVTTEAIKSRDKVKKRERAFKVPTHITFDNEGSE------------- 853
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL D+ TL + + + ++ T + FY+
Sbjct: 854 ------------IYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 901
Query: 298 RHVDGLPISSEAERERVIQCLEAAIER 324
+ + GL S +++ + + L AAIE+
Sbjct: 902 KDMFGLKYYSASKQRNLERRLRAAIEQ 928
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 842 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 901
Query: 74 IDCDGKK 80
D G K
Sbjct: 902 KDMFGLK 908
>gi|389798397|ref|ZP_10201414.1| PII uridylyl-transferase [Rhodanobacter sp. 116-2]
gi|388445005|gb|EIM01093.1| PII uridylyl-transferase [Rhodanobacter sp. 116-2]
Length = 863
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + V++ +SS G +D F +
Sbjct: 670 PLVAVHPLSVRGSTELFVYTPDRDGLFATVTAVLDRLRFSVMESRILSSPTGMALDTFLL 729
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
+D D ++ + +QQRL+ +L S GV P++
Sbjct: 730 LDADSQQPVSAARAEELQQRLQR------ALVQSAGVQPSKRGLSRHQKHFQMTPQISFH 783
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T + GTDRPGL + V V+ V +A I T +R +TD
Sbjct: 784 AAGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTD 836
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D +K
Sbjct: 907 APTRQAAIKRALVHLLANGDAEQK 930
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 75 DCDGKKI 81
D G +I
Sbjct: 899 DLLGAQI 905
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 37/209 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + + D G
Sbjct: 740 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISIRREYDRDEDEG-- 797
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ VL G L P + R R +
Sbjct: 798 ----RRATRIGEIIEEVLEG---------KLRLPEAVAR---------------RATSSK 829
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
++ P++++ N D YTVI + DRP LL+ + ++ + + V T
Sbjct: 830 TKLRAFVVEPEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G I++ + + + L
Sbjct: 890 RARDVFYVTDLLGAQITAPTRQAAIKRAL 918
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 864 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 922
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 923 APTRQAAIKRALVHLLANGDAAEK 946
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 846 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 905
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 906 RARDVFYVTDLLGAQI 921
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT +E +G DRPGL + L+ L+ N+ +A + T +RA V +VTD G I
Sbjct: 879 SNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTD-LMGAKIT 937
Query: 173 DPKRLSTIKELLFNVLRG 190
R STI+ L V G
Sbjct: 938 GAARQSTIRRALVAVFEG 955
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L + L+ +NL I A++++ G +DVF V
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 75 DCDGKKI 81
D G KI
Sbjct: 930 DLMGAKI 936
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 240 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+VTV N + +TV+ + DRP LLF + TL+ + + V T A FY+
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 299 HVDGLPISSEAERERVIQCLEAAIE 323
+ G I+ A + + + L A E
Sbjct: 930 DLMGAKITGAARQSTIRRALVAVFE 954
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 902
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 903 APTRQAAIKRALVHLLANGDAAEK 926
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGAQI 901
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ D +L
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99
++ A I++ G DVF V D D + + D E+ +QQ + T S
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTIVTQLS 886
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A +A L+ N+ +A I T + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
PKR+ I++ L + L D++ P I+ R R+L F
Sbjct: 762 NPKRIQQIRQSLIDTLMHPDEY---------PSIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I D V + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F++ D P+S
Sbjct: 853 RVEDVFFVTDADNQPLS 869
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD---------KEVID----------YIQQRLETDA---SFAPSLRSSV 108
+ V++ +G I D + +ID IQ+R+ +FAP + ++
Sbjct: 749 YIVLEAEGGSIGDNPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL +++ + D +V NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + +++ + L
Sbjct: 866 QPLSDPELCARLQQTIVTQL 885
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN AD TVI + + +K G+L ++ L+++ L I + +S+ DVF V
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI D++ ++ I+ RL
Sbjct: 870 KDIFGQKILDQDKLEEIRGRL 890
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
D PGLFS + V+A N++ A I T+ N + V+ V + G+ I D R +++
Sbjct: 719 DTPGLFSMITGVMAANGMNILGAHILTNLNGKVLDVLQV-NSPQGFVITDEARWQRVEDD 777
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP-QV 242
+ VL G KT ++ + ++R H+ F EKA K P +V
Sbjct: 778 MRQVLEG-------KTKIAA---LVKKR--HRAAF------LAEKA------KPKFPTRV 813
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
+ N + DYTVI + + D+ LL+ I L+++ + V+T + FY++ +
Sbjct: 814 EIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKDIF 873
Query: 302 GLPI----SSEAERERVIQCLEAA 321
G I E R R++Q ++ A
Sbjct: 874 GQKILDQDKLEEIRGRLLQSIDEA 897
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P PRV I N+ TVI++ + ++ G+L +V ++ D +L
Sbjct: 781 DDYPSIIQRRVPRQLKHFDFAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
I+ A I++ G DVF V D + +++ D E+ +Q+ + + S A S++G P+
Sbjct: 841 SIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTRLQETIVSQLSDA----STLGAEPS 896
Query: 114 E 114
+
Sbjct: 897 K 897
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T + + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD---------KEVID----------YIQQRLETDAS---FAPSLRSSV 108
+ V++ DG I D + +ID IQ+R+ FAP R ++
Sbjct: 749 YIVLEGDGSSIGDNPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFDFAP--RVTI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T IE T DRPGL + V + D ++ NA+I T +R V VTD +
Sbjct: 807 HNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + ++E + + L
Sbjct: 866 QQLSDPELCTRLQETIVSQL 885
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 33/156 (21%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T + D+ F+ A +A L+ N+ +A I T + ++ G +I D
Sbjct: 702 EGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEGDGSSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L + L DD+ P I+ R R+L F
Sbjct: 762 NPARIKQIRQGLIDALINPDDY---------PSIIQRRVPRQLKHFDF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLL 265
P+VT+ N ++ TVI + + DRP LL
Sbjct: 801 --------APRVTIHNDAKRPLTVIELTAPDRPGLL 828
>gi|171914691|ref|ZP_02930161.1| protein-P-II uridylyltransferase, putative [Verrucomicrobium
spinosum DSM 4136]
Length = 934
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV I+N+ D VI++ ++++ G+L + + + L I A I+++ G +D +
Sbjct: 834 PQRVYINNDLTTDYNVIEIQALDRIGLLYDIFMAIGQLGLNICHARINTEKGVALDAIYI 893
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM 111
D +K+ DK+V+ +Q +LE +A F+ ++S G++
Sbjct: 894 QDKAEQKVTDKDVLKELQAQLE-EAVFSFGRQNSSGML 930
>gi|302784983|ref|XP_002974263.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
gi|302807877|ref|XP_002985632.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300146541|gb|EFJ13210.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300157861|gb|EFJ24485.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
Length = 210
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVID + TV++V ++ G LL ++ L D+ L + K + G + F++
Sbjct: 8 PIVVIDQDADPHTTVVEVSFGDRLGALLDTMKSLRDLGLTVVKGNVKMVGNTRRNRFSIT 67
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEH-----TSIEF 121
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ +I+
Sbjct: 68 RADNGRKVEDPELLESIRLTIIDNLLKYHPESSARLAMGEAFGIKPPKKQEIQTFITIKE 127
Query: 122 TGT----------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
G+ D+PGL E+ ++ D+ +V +AE+ T A HV+ G A+
Sbjct: 128 DGSDKSLLTIETADKPGLMIEILKIINDISVSVESAEMDTEGLIAKDKFHVS--YGGKAL 185
Query: 172 KDPKRLSTIKELLFNVLRGY 191
++ ++L N LR Y
Sbjct: 186 S-----KSLSQVLTNCLRYY 200
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 106 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+ + + P T + D P L S + A N+V+A+++T D A V
Sbjct: 730 THIDIEPLRGVTELTVIAPDSPHLLSIIAGACAASSANIVDAQVFTTTDGMALDTIVVSR 789
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
+ + +R S I + N L G +I D R
Sbjct: 790 EFDFDEDELRRASRIAFAVENALAG------------------------EITLTDMVAAR 825
Query: 226 VEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
V A R + P+VT+ N + +TV+ + DRP LLFD+ ++++ + +
Sbjct: 826 VGSAGARQKTFKVHPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHI 885
Query: 285 NTGRTEAYQEFYIRHVDGL----PISSEAERERVIQCLE 319
T +A FY+ +G P+ EA R +++ +
Sbjct: 886 ATFGEKAADVFYVSDNEGTKITEPVRQEAVRRKILHIFD 924
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN+ TV++V +++ G+L + +++++L I A+I++ G DVF V
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 75 DCDGKKI 81
D +G KI
Sbjct: 900 DNEGTKI 906
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 847 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 905
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 906 APTRQAAIKRALVHLLANGD 925
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 829 AKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 888
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 889 RARDVFYVTDLLGAQI 904
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 37/222 (16%)
Query: 104 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 162
L +VG T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAVNVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISI 785
Query: 163 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 217
+ D G +R + I E++ VL G L P + R
Sbjct: 786 SREYDRDEDEG------RRATRIGEMIEEVLEG---------KLRLPEAVAR-------- 822
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 276
R ++ P+V++ N D YTVI + DRP LL+ + ++ +
Sbjct: 823 -------RATNGRAKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLN 875
Query: 277 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ V T A FY+ + G I++ + + + L
Sbjct: 876 LNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 917
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 858 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 916
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L ++L D R A
Sbjct: 917 APTRQAAIKRALVHLLSNADPTRGA 941
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 21 NNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
NN ++ TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V D G
Sbjct: 854 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 913
Query: 80 KI 81
+I
Sbjct: 914 QI 915
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 855 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 913
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L ++L D R A
Sbjct: 914 APTRQAAIKRALVHLLSNADPTRGA 938
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 21 NNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
NN ++ TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V D G
Sbjct: 851 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 910
Query: 80 KI 81
+I
Sbjct: 911 QI 912
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----------- 94
+ + L I A I+ S W ++ F V+D G+ IRD E I+ +++ L
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDHYGQPIRDPEHIEEMRRHLVEELDDPDDYP 788
Query: 95 ETDASFAPSLRSSVGVM--------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
E P V P E T +E T DRPGL + V + + +
Sbjct: 789 EIVTRHTPRQLKHFKVPTEVVIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|261253730|ref|ZP_05946303.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954531|ref|ZP_12597565.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260937121|gb|EEX93110.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815251|gb|EGU50175.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 873
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYCKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRSSVGVMPTE- 114
+D +G I R K V ++ L A P+ ++++V +PT+
Sbjct: 739 LDQNGDAIDESRHKAVTKHLAHVL---ADGRPTKIKRRRTPRNLQHFKVKTTVDFLPTKS 795
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL + V A AD ++ A+I T +RA + +T S G
Sbjct: 796 KKRTLLEFVALDTPGLLATVGATFADQGVHLHAAKITTIGERAEDLFIITSPSGG 850
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN+ TVI+V++ ++ +L ++ + L + ++++ A+I++ G D F V
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D+ +D I+Q L AS
Sbjct: 885 DLTGAKITDESRMDTIRQALLDAAS 909
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD-- 83
AT++ V + + G+ ++ ++ I A I ++ GW +D + V D G+ +
Sbjct: 726 ATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFAEER 785
Query: 84 ------KEVIDYIQQRLETDASFA--PSLRSSVGVM-----------PTEEHTSIEFTGT 124
+ + D I R E A P ++ G + T IE
Sbjct: 786 QLARIEQAIADAIANRGELVPKLAKRPLKQTRAGAFDVRPRVLFDNDASGRFTVIEVNAR 845
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DR L + + L + V +A I + +RAA +VTD TG I D R+ TI++ L
Sbjct: 846 DRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTD-LTGAKITDESRMDTIRQAL 904
Query: 185 FNV 187
+
Sbjct: 905 LDA 907
>gi|407791701|ref|ZP_11138781.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
gi|407199178|gb|EKE69199.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
Length = 856
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 36/169 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + +T T + V + ++ + + VL+ NL I A + +S GW +D V
Sbjct: 665 PLVKLSKHTTRGGTELFVYTRDRAQLFACIASVLDGKNLSINDAQVMTSKDGWALDSLVV 724
Query: 74 IDCDGKKIRDKEVIDYIQQRLE--------------------------TDASFAPSLRSS 107
++ DG + + ++ +E TD +F PS R
Sbjct: 725 VERDGSPVESPSRVQSTRRAIEKALLQAKFPKPVQRPLPRQLKPFQVSTDVTFLPSSR-- 782
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +EFT DRPGL ++V V A+ ++ A+I T +RA
Sbjct: 783 -------KQTLVEFTALDRPGLLAQVGQVFAEQDISLKAAKITTIGERA 824
>gi|258627348|ref|ZP_05722132.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
gi|258580386|gb|EEW05351.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
Length = 876
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + +
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEE 855
Query: 175 KRLSTIKELLFNV 187
+ ++L+ NV
Sbjct: 856 EEQLLREKLIENV 868
>gi|254459661|ref|ZP_05073077.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676250|gb|EDZ40737.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 922
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 35/226 (15%)
Query: 107 SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT 163
++ + P E+ T + F D PG+FS + LA + NVV+A +T ND A A +
Sbjct: 720 AIDIHPDEDRDATRVCFALADHPGIFSRLSGALALVGANVVDARTFTSNDGYATAAFWIQ 779
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDD 220
D G + R+ +++++ L G + + I RER I FD+
Sbjct: 780 DGDDG--PYEEARIPRLRKMIEKTLSG--EVVATEAIRDRDKIKKRERAFRVPTHITFDN 835
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
E YT+I + ++DRP LL D+ L M +
Sbjct: 836 EGSE-------------------------IYTIIEVDTRDRPGLLHDLTRCLASMNVYIS 870
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
++ T + FY++ + GL + +++ + + + AI + A
Sbjct: 871 SAVIATYGEQVVDTFYVKDMFGLKYHAASKQRTLEKKMREAISKGA 916
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L +N+ I A I++ G +D F V
Sbjct: 828 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYV 887
Query: 74 IDCDGKK 80
D G K
Sbjct: 888 KDMFGLK 894
>gi|258620994|ref|ZP_05716028.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|424807474|ref|ZP_18232882.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
gi|258586382|gb|EEW11097.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|342325416|gb|EGU21196.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
Length = 876
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + +
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEE 855
Query: 175 KRLSTIKELLFNV 187
+ ++L+ NV
Sbjct: 856 EEQLLREKLIENV 868
>gi|384411454|ref|YP_005620819.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931828|gb|AEH62368.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 926
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVRGHEMPAYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH------------------VE-----PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|262170770|ref|ZP_06038448.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
gi|261891846|gb|EEY37832.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
Length = 876
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + +
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEE 855
Query: 175 KRLSTIKELLFNV 187
+ ++L+ NV
Sbjct: 856 EEQLLREKLIENV 868
>gi|56551662|ref|YP_162501.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355226|sp|Q5NPH0.1|GLND_ZYMMO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56543236|gb|AAV89390.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 926
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVRGHEMPAYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH------------------VE-----PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|226528888|ref|NP_001143395.1| uncharacterized protein LOC100276033 [Zea mays]
gi|195619682|gb|ACG31671.1| hypothetical protein [Zea mays]
Length = 277
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D F +
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 DC-DGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEE--- 115
G+KI D E+++ ++ +L A+F P PTEE
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPE-------APTEEVDV 183
Query: 116 ----HTSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
H I G DRPGL ++ +++D+ NV + E T A A H
Sbjct: 184 DIATHIDIYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFH 243
Query: 162 VT 163
V+
Sbjct: 244 VS 245
>gi|406833391|ref|ZP_11092985.1| protein-P-II uridylyltransferase [Schlesneria paludicola DSM 18645]
Length = 915
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVV+DN + TVI V + ++ G+L + + L + NL + A I++ +DVF V
Sbjct: 820 PMRVVVDNESSDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFV 879
Query: 74 IDCDGKKIRDKE 85
+ DG+K+RD E
Sbjct: 880 TESDGRKVRDGE 891
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T I+ DRPGL + L + + +V A+I TH D+ V VT+ S G ++
Sbjct: 830 SDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVTE-SDGRKVR 888
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTS 200
D +RL ++++ L L+ DF K+ +
Sbjct: 889 DGERLKSLRDFLTLQLQ---DFEKSAAT 913
>gi|224100729|ref|XP_002311991.1| predicted protein [Populus trichocarpa]
gi|222851811|gb|EEE89358.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T++K+ + G++ + + L D N+ I + S G +D+
Sbjct: 232 NPVSVTVDNAFSPSHTLVKILCKDHKGLIYDITRTLKDYNIQISYGRFLASRKGNCEVDL 291
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D + + RL + P + V P E +E +G RP
Sbjct: 292 F-LMQADGKKIVDPNKQNALCSRLRMEL-LCPLRLAVVSRGPDTELLVANPVELSGRGRP 349
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
+F ++ L +L+ + + EI H +DR V + G + K I+E +
Sbjct: 350 LVFHDITLALKNLNTPIFSVEIGRHMIHDREWEVYRILLEGDGLPVSRNK----IEEGVR 405
Query: 186 NVLRGYD 192
VL G++
Sbjct: 406 KVLMGWE 412
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ S ++E
Sbjct: 866 QPLSDPQLCSRLQE 879
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 842 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 879
>gi|404493132|ref|YP_006717238.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
gi|77545196|gb|ABA88758.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
Length = 906
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P +T + D PGLF+ + V+A N+ A+I+T D A + +GYA
Sbjct: 713 PDGFYTQLTIVTHDMPGLFTMITGVMAAYGINIFGAQIFTQRDGTAFDILQVKGPSGYAD 772
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
++ T++E L V+ G L ++ + +R + + D + +V
Sbjct: 773 ATSEKWRTVEESLLAVIEG---------RLKVEDLIRKRQR--PVFWADAGHPKVP---- 817
Query: 232 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
+V + N + +DYTV+ + + D +L+ I TL D+ + ++T +
Sbjct: 818 --------SRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQ 869
Query: 291 AYQEFYIRHVDGLPISS----EAERERVIQCLE 319
FY++ + I+ E R +++ CL+
Sbjct: 870 VADTFYVKDIFSQKITDPDRMEEVRSQLLNCLD 902
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN D TV+ V + ++ G+L ++ + L D+ L + A IS+ D F V
Sbjct: 817 PSRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYV 876
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +KI D + ++ ++ +L
Sbjct: 877 KDIFSQKITDPDRMEEVRSQL 897
>gi|168008130|ref|XP_001756760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691998|gb|EDQ78357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ ++ G LL I+ L D+ L + + ++++G ++
Sbjct: 7 PIVLIDQESDSEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLV 66
Query: 75 --DCDGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEEHT 117
+ KK+ D E+++ I+ ++L +F+ + + + H
Sbjct: 67 TRSANNKKVEDPELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPKNQIDVDVATHV 126
Query: 118 SIEFTGT---------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G+ DRPGL E+ V+ D+ V +AEI T A +VT H
Sbjct: 127 TVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGLIAKDKFYVTYHGDV 186
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ +++E+L N LR Y R+ +T
Sbjct: 187 LS-------KSMEEVLTNALRYY--LRRPET 208
>gi|334345822|ref|YP_004554374.1| UTP-GlnB uridylyltransferase GlnD [Sphingobium chlorophenolicum
L-1]
gi|334102444|gb|AEG49868.1| UTP-GlnB uridylyltransferase, GlnD [Sphingobium chlorophenolicum
L-1]
Length = 919
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 30/209 (14%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
P +LS I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLSRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLE 319
A FY+ + I S+A +Q LE
Sbjct: 878 AVDTFYVTDLLAGKIESKAR----LQTLE 902
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI K + +++RL
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDA-----------------SFAPSLRSSV 108
+ V+D DG I D K++ D + + L A +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ S ++E
Sbjct: 866 QPLSDPQLCSRLQE 879
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 842 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 879
>gi|413934235|gb|AFW68786.1| hypothetical protein ZEAMMB73_680007 [Zea mays]
Length = 277
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D F +
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 DC-DGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEE--- 115
G+KI D E+++ ++ +L A+F P PTEE
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPE-------APTEEVDV 183
Query: 116 ----HTSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
H I G DRPGL ++ +++D+ NV + E T A A H
Sbjct: 184 DIATHIDIYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFH 243
Query: 162 VT 163
V+
Sbjct: 244 VS 245
>gi|339505073|ref|YP_004692493.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
gi|338759066|gb|AEI95530.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
Length = 925
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F +D PG+F+ + LA + NVV+A +T D + + G D RL +
Sbjct: 740 FVMSDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAYWIQDADGNPY-DVSRLPRL 798
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L G + + S + RER I FD+ E
Sbjct: 799 RKMIERTLMG--EVVTTEAMKSRDKVKKRERAFKVPTHITFDNEGSE------------- 843
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL D+ TL + + + ++ T + FY+
Sbjct: 844 ------------IYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 891
Query: 298 RHVDGLPISSEAERERVIQCLEAAIER 324
+ + GL S +++ + + L AIE+
Sbjct: 892 KDMFGLKYYSASKQRTLERRLRTAIEQ 918
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 832 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 891
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K +++RL T
Sbjct: 892 KDMFGLKYYSASKQRTLERRLRT 914
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN+ + TVI++ +++ G+L + L +NL I A+I + G +DVF V
Sbjct: 819 PPEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYV 878
Query: 74 IDCDGKKI 81
D G KI
Sbjct: 879 TDLTGTKI 886
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T IE +G DRPGL ++ L L+ N+ +A I T ++A V +VTD TG I
Sbjct: 829 SSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTD-LTGTKIT 887
Query: 173 DPKRLSTIKELLFNVLRG 190
R +TI L V +
Sbjct: 888 HAGRQATITRTLLEVFKA 905
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I A I++ G +D F V
Sbjct: 848 PPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G+KI ++ I RL+
Sbjct: 908 TDLVGQKISNENKRANITARLK 929
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ R KA
Sbjct: 810 RAGTIGRMIEDVLAG-------------------RKRLPEVIATRTKNRRKNKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P VT+ N + +TVI + DR LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDS 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAI 322
FY+ + G IS+E +R + L+ +
Sbjct: 905 FYVTDLVGQKISNENKRANITARLKPVM 932
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DR GL SE+ +VL+DL ++ +A I T ++ +VTD G I
Sbjct: 858 SNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTD-LVGQKIS 916
Query: 173 DPKRLSTIKELLFNVLRGYDD 193
+ + + I L V+ G +D
Sbjct: 917 NENKRANITARLKPVMAGEED 937
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT +E +G DRPGL + L+ L+ N+ +A I T +RA V +VTD G I
Sbjct: 849 SNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTD-LMGAKII 907
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
R S I+ L VL D+ A
Sbjct: 908 GAARHSAIRRALLQVLDADDEANAA 932
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N+ TV++V +++ G+L + Q L+ +NL I A+I++ G +DVF V
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 75 DCDGKKI 81
D G KI
Sbjct: 900 DLMGAKI 906
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGDSIGDNPARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + L
Sbjct: 866 HPLSDPLLCSRLQDAIVEQL 885
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARTKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNHPLS 869
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+I+N ATV+ V + G LL L + L I +A +S ++ F +
Sbjct: 53 PAVIINNTEDPLATVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYIT 112
Query: 75 DC-DGKKIRDKEVIDYIQ---------------------QRLET-----------DASFA 101
D +KI + ++ I+ Q +E A A
Sbjct: 113 DARTSEKITKSKTLELIRMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVA 172
Query: 102 PSLRSSVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
P++++SV V T + + T TDRPGL ++ A L DL NV++AEI T +A +
Sbjct: 173 PAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDI 232
Query: 160 VHVT 163
V+VT
Sbjct: 233 VYVT 236
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
G + A L L N+V AE+ + ++TD T I K L I+ + N
Sbjct: 77 GQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYITDARTSEKITKSKTLELIRMTIINN 136
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE------RVEKAVGR--VEDKSSR 239
+ Y P H M DRD + RV AV V D +S
Sbjct: 137 MLQYH----------PEAADYLVEGQHIEMPGDRDADANPLGARVAPAVKTSVVVDNTSG 186
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
+ + L +IT + DRP LL DIV TL D+ V ++T +AY Y+ +
Sbjct: 187 ARQSKL-------IIT--TTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYVTY 237
Query: 300 VDG 302
G
Sbjct: 238 QGG 240
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +V+I N+ D TV+ V ++++ G+L ++ ++ + +L+++ A I++ G DVF +
Sbjct: 802 PTQVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFI 861
Query: 74 IDCDGKKIRDKEVIDYIQQRLETD 97
DG + D ++ +QQRL+ +
Sbjct: 862 TQKDGGPVTDPDLCQRLQQRLKEE 885
>gi|260752753|ref|YP_003225646.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552116|gb|ACV75062.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 926
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVRGHEMPPYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH------------------VE-----PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I+ A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRRVPRQLKHFAFAPLV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V +VTD +
Sbjct: 807 STDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTD-AHN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLSDPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D + + D ++ +Q L
Sbjct: 841 SVRNAKIATLGERVEDVFYVTDAHNQPLSDPDLCKRLQAAL 881
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T ++ + G +I D
Sbjct: 702 EGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDTYIVLDADGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R++ I++ L + L+ DD+ P I+ R R+L F
Sbjct: 762 NPQRIAEIRQGLVDALKNPDDY---------PNIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P VT+ + + +V+ + + DRP LL I D V + + T
Sbjct: 801 --------APLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
FY+ P+S
Sbjct: 853 RVEDVFYVTDAHNQPLS 869
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
KIR E + Q D F + ++ +T IE TG DRPGL ++ ++
Sbjct: 826 KIRLPETVAKRTQTRTKDKVFVVEPEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 885
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 197
L N+ +A + T +R V +VTD G I P R + IK L ++L D R A
Sbjct: 886 LSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPTRQAAIKRALVHLLANPDVARGA 942
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 75 DCDGKKI 81
D G +I
Sbjct: 910 DLMGAQI 916
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 566 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 625
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFA-------PSLRSSVGVMP------ 112
+ V+D DG I D K++ D + + L A + P P
Sbjct: 626 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVTIHN 685
Query: 113 --TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 686 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQP 744
Query: 171 IKDPKRLSTIKE 182
+ DP+ S ++E
Sbjct: 745 LSDPQLCSRLQE 756
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 659 DYPTIIQRRVPRQLKHFAFAPLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 718
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 719 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 756
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 880 TDLTGTRV 887
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MP 112
I SDG WF+ + + T AS S R S+G+ M
Sbjct: 58 IWSDGRWFIRSWTSSMSPTASVASSP----------TTASSPTSSRLSLGMWNGPTRPMA 107
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152
E T++E TG R GL SEV AVLAD+ C VV W H
Sbjct: 108 LEGLTALELTGAGRTGLISEVFAVLADMDCGVVEGRAWMH 147
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ I+ L E D
Sbjct: 729 AMEQLGLSIHDARIATSSNDWTLNTFIVLDDLGRAIRDPARIEEIRAHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 QIVTRHTPRQLRHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +TD S G + DP+R ++ L VL
Sbjct: 849 AKIATLGERVEDVFFITDKS-GAPLTDPERQQRLRARLIEVL 889
>gi|78357352|ref|YP_388801.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
gi|78219757|gb|ABB39106.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
Length = 872
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D+PGLFS + VLA +V +A+ + G + D R+S
Sbjct: 693 FAAKDQPGLFSVLTGVLALHGLDVFSADAFVWG--------------GGVVLDVFRVSPP 738
Query: 181 KELLFNVLRGYDDFRKAKTS--LSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
+ L+ D + K + S + G ++ + RL ++ R V+KA G
Sbjct: 739 PDPLY----ARDFWAKVRGSVHFALTGKLSLDFRLEEMR--SRSLSPVQKAGG------G 786
Query: 239 RPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
R +VT+ N D Y+VI + + DRP LL+DI T+ M+ + + T + F +
Sbjct: 787 RTEVTIDNAISDFYSVIDITAPDRPVLLYDIARTMQAMRLDIQFARIATHGMQTSDSFSV 846
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
R V G + E + E V Q L A+
Sbjct: 847 RDVFGNKLLEEQQCEEVRQALLHAV 871
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV IDN + TV+ V ++++ G+L Q+ L + + I + IS+ G D F V
Sbjct: 806 PPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYV 865
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI E +D +++ L D S
Sbjct: 866 QDIFGHKIVQPEKLDELRETLIKDLS 891
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 36 NKHGILLQVIQVLNDVNLV---IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
K GI + ++QV D N+ K A I D WF+ +D +K R ++D +Q
Sbjct: 743 QKSGIAVDILQVGRDGNIYDDDRKWATIEKDLIWFLQGRGDVDEQVEK-RKSSILDLSRQ 801
Query: 93 RLETDASFAPSL--RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
P++ R + ++E+T ++ T DR GL ++ L + + ++I
Sbjct: 802 --------VPTIPPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKIS 853
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
T DRA +V D G+ I P++L ++E L L
Sbjct: 854 TKGDRAGDTFYVQD-IFGHKIVQPEKLDELRETLIKDL 890
>gi|403057411|ref|YP_006645628.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804737|gb|AFR02375.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 930
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 729 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 788
Query: 71 FNVIDCDGKKI-RDK-EVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + +D+ E+I + ++ T S+ +P LR + V +PT
Sbjct: 789 FIVLEPDGSPLAQDRHEMIRHALEQALTHRSYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 848
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 849 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 907
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 908 DLRLKLQERL 917
>gi|429888049|ref|ZP_19369548.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
gi|429224925|gb|EKY31233.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKIR- 82
+AT + + ++ G+ + + ++ N+V + + SS G +DVF V D G
Sbjct: 745 NATAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGH-ALDVFYVQDSQGLPFGH 803
Query: 83 -DKEVIDYIQQRLETDA-----------SFAPSLRSSVGVMPT--------EEHTSIEFT 122
D + + +Q+LE A S ++ + PT T IE +
Sbjct: 804 DDAQRMKQAEQQLEQAALGHLPPPVAYRSALAGRTAAFAIAPTVAFDDASKANATIIEVS 863
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL +++ V+A L ++ +A I + +RA +VTDH + ++ K+
Sbjct: 864 GRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVTDHFKKSQLTAGQKQVLKKQ 923
Query: 183 LL 184
LL
Sbjct: 924 LL 925
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 30/184 (16%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--YAIKDP 174
T+ + DRPGLF+++ A++ NVV A+++T + A V S G + D
Sbjct: 747 TAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGHALDVFYVQDSQGLPFGHDDA 806
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
+R+ ++ L G+ PP + R GR
Sbjct: 807 QRMKQAEQQLEQAALGH----------LPPPVAYR-----------------SALAGRTA 839
Query: 235 DKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ P V + K + T+I + +DRP LL D+V + ++ + ++ A
Sbjct: 840 AFAIAPTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVD 899
Query: 294 EFYI 297
FY+
Sbjct: 900 AFYV 903
>gi|153803000|ref|ZP_01957586.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
gi|124121443|gb|EAY40186.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|421351981|ref|ZP_15802346.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
gi|395952426|gb|EJH63040.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|421344317|ref|ZP_15794720.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
gi|395940397|gb|EJH51078.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
Length = 861
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 662 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 721
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 722 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 781
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 782 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 831
>gi|417821593|ref|ZP_12468207.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|419830711|ref|ZP_14354196.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|419834394|ref|ZP_14357849.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|422918100|ref|ZP_16952418.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|423823002|ref|ZP_17717012.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|423856967|ref|ZP_17720819.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|423883595|ref|ZP_17724406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|423957568|ref|ZP_17735311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|423985548|ref|ZP_17738862.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|423998525|ref|ZP_17741777.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|424017422|ref|ZP_17757251.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|424020347|ref|ZP_17760130.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|424625721|ref|ZP_18064182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|424630209|ref|ZP_18068493.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|424634253|ref|ZP_18072353.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|424637330|ref|ZP_18075338.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|424641238|ref|ZP_18079121.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|424649306|ref|ZP_18086969.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|443528223|ref|ZP_21094267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
gi|340039224|gb|EGR00199.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|341636982|gb|EGS61676.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|408011662|gb|EKG49469.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|408017616|gb|EKG55107.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|408022723|gb|EKG59918.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|408023118|gb|EKG60298.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|408032022|gb|EKG68621.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|408054177|gb|EKG89163.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|408620484|gb|EKK93496.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|408634978|gb|EKL07213.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|408640314|gb|EKL12110.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|408640661|gb|EKL12449.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|408649216|gb|EKL20533.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|408656672|gb|EKL27766.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|408663665|gb|EKL34527.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|408852424|gb|EKL92252.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|408859619|gb|EKL99276.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|408866924|gb|EKM06295.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|443453481|gb|ELT17304.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|254226776|ref|ZP_04920350.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
gi|125620714|gb|EAZ49074.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|153828190|ref|ZP_01980857.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
gi|148876279|gb|EDL74414.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|422308202|ref|ZP_16395355.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
gi|408618067|gb|EKK91156.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|424618043|ref|ZP_18056714.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
gi|395961418|gb|EJH71746.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|422923565|ref|ZP_16956712.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|424591969|ref|ZP_18031393.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
gi|341643854|gb|EGS68116.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|408029997|gb|EKG66678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N+ TVI+++ +++ G+L +V VL D++L I A I++ G +D F VI
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G+KI ++ I RL+ S P
Sbjct: 886 DLVGQKITNENRQGSISVRLKAVMSEQP 913
>gi|15642260|ref|NP_231893.1| PII uridylyl-transferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586159|ref|ZP_01675950.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121729748|ref|ZP_01682187.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|147673286|ref|YP_001217777.1| PII uridylyl-transferase [Vibrio cholerae O395]
gi|153217366|ref|ZP_01951117.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|153823644|ref|ZP_01976311.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|153827573|ref|ZP_01980240.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227082386|ref|YP_002810937.1| PII uridylyl-transferase [Vibrio cholerae M66-2]
gi|227118708|ref|YP_002820604.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254849392|ref|ZP_05238742.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|298500363|ref|ZP_07010168.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
gi|9656824|gb|AAF95406.1| protein-P-II uridylyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549571|gb|EAX59595.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121628499|gb|EAX60985.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|124113612|gb|EAY32432.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|126518839|gb|EAZ76062.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|146315169|gb|ABQ19708.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|149737953|gb|EDM52858.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227010274|gb|ACP06486.1| protein-P-II uridylyltransferase [Vibrio cholerae M66-2]
gi|227014158|gb|ACP10368.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254845097|gb|EET23511.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|297541056|gb|EFH77110.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|417825496|ref|ZP_12472084.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
gi|340046981|gb|EGR07911.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|229513904|ref|ZP_04403366.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
gi|229349085|gb|EEO14042.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|229507664|ref|ZP_04397169.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229512141|ref|ZP_04401620.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229519276|ref|ZP_04408719.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229524265|ref|ZP_04413670.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229607168|ref|YP_002877816.1| PII uridylyl-transferase [Vibrio cholerae MJ-1236]
gi|255747043|ref|ZP_05420988.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262161413|ref|ZP_06030523.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|262168262|ref|ZP_06035959.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|360036138|ref|YP_004937901.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742066|ref|YP_005334035.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|384425225|ref|YP_005634583.1| [protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|417814289|ref|ZP_12460942.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|417818026|ref|ZP_12464655.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|418335271|ref|ZP_12944182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|418338880|ref|ZP_12947774.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|418346804|ref|ZP_12951562.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|418350566|ref|ZP_12955297.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|418355711|ref|ZP_12958430.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|419827220|ref|ZP_14350719.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|421317962|ref|ZP_15768530.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|421322018|ref|ZP_15772571.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|421325820|ref|ZP_15776344.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|421329478|ref|ZP_15779988.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|421333434|ref|ZP_15783911.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|421336976|ref|ZP_15787437.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|421340404|ref|ZP_15790836.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|421348410|ref|ZP_15798787.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|422897359|ref|ZP_16934803.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|422903557|ref|ZP_16938527.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|422907442|ref|ZP_16942240.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|422914286|ref|ZP_16948791.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|422926490|ref|ZP_16959503.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|423145812|ref|ZP_17133406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|423150488|ref|ZP_17137802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|423154307|ref|ZP_17141488.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|423157390|ref|ZP_17144483.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|423160961|ref|ZP_17147901.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|423165788|ref|ZP_17152512.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|423731810|ref|ZP_17705113.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|423769093|ref|ZP_17713231.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|423895955|ref|ZP_17727434.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|423931487|ref|ZP_17731827.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|424003240|ref|ZP_17746315.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|424007031|ref|ZP_17750001.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|424025011|ref|ZP_17764661.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|424027897|ref|ZP_17767499.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|424587177|ref|ZP_18026755.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|424595829|ref|ZP_18035148.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|424599742|ref|ZP_18038920.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|424602503|ref|ZP_18041643.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|424607436|ref|ZP_18046377.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|424611254|ref|ZP_18050093.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|424614069|ref|ZP_18052854.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|424622827|ref|ZP_18061332.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|424645790|ref|ZP_18083525.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|424653561|ref|ZP_18090941.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|424657380|ref|ZP_18094665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|440710501|ref|ZP_20891149.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443504608|ref|ZP_21071564.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443508509|ref|ZP_21075270.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443512353|ref|ZP_21078988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443515907|ref|ZP_21082417.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443519701|ref|ZP_21086094.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443524592|ref|ZP_21090802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443532186|ref|ZP_21098200.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443535994|ref|ZP_21101865.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443539527|ref|ZP_21105381.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|449055281|ref|ZP_21733949.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
gi|50402122|sp|Q9KPV0.2|GLND_VIBCH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229337846|gb|EEO02863.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229343965|gb|EEO08940.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229352106|gb|EEO17047.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229355169|gb|EEO20090.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229369823|gb|ACQ60246.1| [Protein-PII] uridylyltransferase [Vibrio cholerae MJ-1236]
gi|255735445|gb|EET90845.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262023154|gb|EEY41858.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|262028724|gb|EEY47378.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|327484778|gb|AEA79185.1| [Protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|340036775|gb|EGQ97751.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|340037749|gb|EGQ98724.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|341620497|gb|EGS46268.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|341620633|gb|EGS46400.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|341621242|gb|EGS46989.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|341636528|gb|EGS61223.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|341645880|gb|EGS70004.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|356416647|gb|EHH70272.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|356417810|gb|EHH71423.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|356422650|gb|EHH76124.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|356427999|gb|EHH81230.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|356430522|gb|EHH83731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|356431788|gb|EHH84988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|356439280|gb|EHH92267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|356444238|gb|EHH97050.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|356445062|gb|EHH97871.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|356450289|gb|EHI03019.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|356452209|gb|EHI04888.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|356647292|gb|AET27347.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795576|gb|AFC59047.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|395916220|gb|EJH27050.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|395917658|gb|EJH28486.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|395919012|gb|EJH29836.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|395928012|gb|EJH38775.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|395928836|gb|EJH39589.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|395932075|gb|EJH42819.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|395939687|gb|EJH50369.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|395942989|gb|EJH53665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|395958328|gb|EJH68824.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|395958738|gb|EJH69209.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|395970366|gb|EJH80137.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|395972525|gb|EJH82115.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|395975181|gb|EJH84678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|408006605|gb|EKG44743.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|408011829|gb|EKG49630.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|408031198|gb|EKG67835.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|408041099|gb|EKG77239.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|408042427|gb|EKG78479.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|408052501|gb|EKG87540.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|408608010|gb|EKK81413.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|408622742|gb|EKK95712.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|408633370|gb|EKL05731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|408653714|gb|EKL24869.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|408654657|gb|EKL25792.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|408844885|gb|EKL85008.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|408845774|gb|EKL85889.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|408869891|gb|EKM09178.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|408878520|gb|EKM17521.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|439973830|gb|ELP50034.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443431079|gb|ELS73633.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443434917|gb|ELS81063.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443438741|gb|ELS88459.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443442844|gb|ELS96147.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443446700|gb|ELT03359.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443449450|gb|ELT09744.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443457576|gb|ELT24973.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443460884|gb|ELT31964.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443465627|gb|ELT40287.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|448265323|gb|EMB02558.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|254286066|ref|ZP_04961027.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
gi|150423976|gb|EDN15916.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|229522208|ref|ZP_04411625.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|419837969|ref|ZP_14361407.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|421354961|ref|ZP_15805293.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|423735926|ref|ZP_17709118.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|424010264|ref|ZP_17753198.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
gi|229341133|gb|EEO06138.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|395954086|gb|EJH64699.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|408629352|gb|EKL02051.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|408856517|gb|EKL96212.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|408863294|gb|EKM02784.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|422911100|ref|ZP_16945728.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|424660765|ref|ZP_18098012.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
gi|341632472|gb|EGS57338.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|408050138|gb|EKG85311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
Length = 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|297580906|ref|ZP_06942831.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
gi|297534732|gb|EFH73568.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|153820325|ref|ZP_01972992.1| [Protein-PII] uridylyltransferase, partial [Vibrio cholerae NCTC
8457]
gi|126509132|gb|EAZ71726.1| [Protein-PII] uridylyltransferase [Vibrio cholerae NCTC 8457]
Length = 334
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 135 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 194
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 195 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 254
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +EF D PGL + V A A+L+ ++ A+I T +RA
Sbjct: 255 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERA 296
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ +++ L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDNHGQPIRDPGHIEEMRRHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 DIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|431930140|ref|YP_007243186.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
gi|431828443|gb|AGA89556.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
Length = 874
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 31/213 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I DR GLF+ A+L L N+++A I T++D + G ++D R
Sbjct: 690 TEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTNDDGMTLNSYQVLDQGGTQVEDETR 749
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L+ I+ L +VL +D SL M R+ + Y +E V D+
Sbjct: 750 LAEIQGALVSVLAEHD------PSLEVARRMPRQYK----------YFPIETKVTFTTDE 793
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
++R TV+ + + DRP LL + + + + T E F+
Sbjct: 794 TNR-----------RTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFF 842
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
I +G PI+ EA+ + CL+ I R +V
Sbjct: 843 ITSPEGRPITCEAD----LNCLQEEIHRHLEQV 871
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 7 KLIRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+LI +P P V I T T I + + ++ G+ + +L+ + L I A I ++
Sbjct: 666 RLILAADPQDLPIVRIRPQTARGGTEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTN 725
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDAS-------------FAPSL 104
D G ++ + V+D G ++ D+ + IQ L E D S F
Sbjct: 726 DDGMTLNSYQVLDQGGTQVEDETRLAEIQGALVSVLAEHDPSLEVARRMPRQYKYFPIET 785
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+ + T T + T DRPGL + V +V + NA+I T
Sbjct: 786 KVTFTTDETNRRTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIAT 832
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N+ D TV+++ +++ G+L + + ++ +NL I A+I++ G +DVF V D
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 77 DGKKIRDKEVIDYIQQRLET 96
G+KI + + I++RLE
Sbjct: 906 TGQKIANIGRQEIIRERLEA 925
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E TG DRPGL ++ ++ L+ N+ +A I T ++ V +VTD TG I
Sbjct: 853 SDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTD-LTGQKIA 911
Query: 173 DPKRLSTIKELLFNVLRGYDDF 194
+ R I+E L + G D
Sbjct: 912 NIGRQEIIRERLEAAVGGNVDM 933
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305
+I DYTV+ + DRP LLFD+ ++ + + + T + FY+ + G I
Sbjct: 851 SISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQKI 910
Query: 306 SSEAERERVIQCLEAAI 322
++ +E + + LEAA+
Sbjct: 911 ANIGRQEIIRERLEAAV 927
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ + L N+ +A + T +RA V +VTD TG +
Sbjct: 837 SSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVT 895
Query: 173 DPKRLSTIKELLFNVL 188
P R + I+ + +V
Sbjct: 896 QPDRQAAIRAAVMDVF 911
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+IDN + TV+++ +++ G+L ++ + ++L I A++++ G +DVF V
Sbjct: 827 PPDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 887 TDLTGTRV 894
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 913 DLVGAKITNENRQANIAARLKA 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I
Sbjct: 862 SNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKIT 920
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R + I L VL G D + + P GI+
Sbjct: 921 NENRQANIAARLKAVLAGEVDEARERM---PSGII 952
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 26/207 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V+A+I T D A + + + +R
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTADGRALDTILVNREFSVDEDETRR 814
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R A R +
Sbjct: 815 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------ARKRSKAF 849
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 850 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 909
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y+ + G I++E + + L+A +
Sbjct: 910 YVTDLVGAKITNENRQANIAARLKAVL 936
>gi|384248969|gb|EIE22452.1| glycoside hydrolase [Coccomyxa subellipsoidea C-169]
Length = 938
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCD 77
DNNT DATV+ + ++H +LL++ LN + L + A I SSD G +DVF V + +
Sbjct: 99 FDNNTDPDATVVTITGPDQHNLLLRLTAALNSMGLNVVSASISSSDDGTVLDVFRVTNSE 158
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTGTDRPG 128
+K+ + + LE A A S RSS G P E G+ R G
Sbjct: 159 DQKVPEDSWDGVRESVLEMLA--ASSSRSSKPAIFGAAPAPEEQQRRPLGSAREG 211
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI I RL+
Sbjct: 909 TDLVGQKISGDSKRSNITARLKA 931
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 811 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTKNRKKSKAF----- 846
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 847 -VIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 905
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + L+A + E+
Sbjct: 906 FYVTDLVGQKISGDSKRSNITARLKAVMAEEQDEL 940
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 859 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 918
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTS--LSPP 204
D KR + L + D+ R+ S ++PP
Sbjct: 919 DSKRSNITARLKAVMAEEQDELRERMPSGIIAPP 952
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + L
Sbjct: 866 HPLSDPLLCSRLQDAIVEQL 885
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARIKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNHPLS 869
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 45/214 (21%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ V LA + NVV+A +T D + G+ + RL +
Sbjct: 752 FVMADHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQDADGHPF-EASRLPRL 810
Query: 181 KELLFNVLRG----------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+++ L G D F+K + + P I FD+ E
Sbjct: 811 NQMILKTLNGEVITGEALETRDKFKKREKAFKVPT---------HITFDNEGSE------ 855
Query: 231 GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
YT+I + ++DR LL+D+ TL + + ++ T +
Sbjct: 856 -------------------IYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQ 896
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
FY++ + GL S+++++ + + L AI +
Sbjct: 897 VVDTFYVKDMFGLKYHSKSKQDFLERKLREAISK 930
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 844 PTHITFDNEGSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYV 903
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K K D+++++L
Sbjct: 904 KDMFGLKYHSKSKQDFLERKL 924
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T IE +G DR GL ++ ++ L+ N+ +A I T +RA +VTD TG I P+
Sbjct: 850 YTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIIAPQ 908
Query: 176 RLSTIKELLFNVLRGYDDFRKAK 198
R +TIK L V + + R A+
Sbjct: 909 RQATIKRQLLEVFQPSAEKRPAR 931
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN+ TVI+V +++ G+L + ++ +NL I A+I + G +D F V
Sbjct: 838 PEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT 897
Query: 75 DCDGKKI 81
D G KI
Sbjct: 898 DLTGAKI 904
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L ++ VL+D++L I A+I++ G +D F V
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT 906
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 907 DLVGAKITNENRQGNIAARLKA 928
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DR GL SE+ AVL+DL ++ +A I T ++ +VTD G I
Sbjct: 856 SNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKIT 914
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R I L VL G D + + P GI+
Sbjct: 915 NENRQGNIAARLKAVLAGEVDEARERM---PSGII 946
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V+A+I T +D A + + + +R
Sbjct: 749 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFSVDEDEMRR 808
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R A R +
Sbjct: 809 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------AKKRSKAF 843
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL +I L+D+ + + T + F
Sbjct: 844 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTF 903
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y+ + G I++E + + L+A +
Sbjct: 904 YVTDLVGAKITNENRQGNIAARLKAVL 930
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+ L VL G
Sbjct: 902 NATRQGNIRRKLLGVLSG 919
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|294013488|ref|YP_003546948.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
gi|292676818|dbj|BAI98336.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
Length = 919
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 30/209 (14%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
P +L+ I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLTRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLE 319
A FY+ + I S+A +Q LE
Sbjct: 878 AVDTFYVTDLLAGKIESKAR----LQTLE 902
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI K + +++RL
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+ L VL G
Sbjct: 902 NATRQGNIRRKLLGVLSG 919
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V++ N TV++V+ +++ G+L ++ VL D++L I A I++ G +D F V
Sbjct: 825 PPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 885 TDLLGTKITNENRQGNISARLKA 907
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 102 PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
PS+ S G+ + + T +E DRPGL +E+ AVLADL ++ +A I T ++ +
Sbjct: 826 PSVILSNGL--SNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFY 883
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
VTD G I + R I L V+ +D + S P GI+
Sbjct: 884 VTD-LLGTKITNENRQGNISARLKAVMAEQEDELR---SGMPSGII 925
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L S + + N+ +A+I+T +D A + + + +R
Sbjct: 728 TEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILINREFPVDEDELRR 787
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER-RLHQIMFDDRDYERVEKAVGRVED 235
+TI ++ +VL G P I R + + MFD
Sbjct: 788 AATIGRMIEDVLSGKKRL--------PEVIATRAKAKRRNKMFD---------------- 823
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TV+ + DRP LL +I L D+ + + T +
Sbjct: 824 --IPPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDT 881
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G I++E + + L+A + + E+
Sbjct: 882 FYVTDLLGTKITNENRQGNISARLKAVMAEQEDEL 916
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVID 88
I SVN + + + L I A I+ S W ++ F V+D DG+ IRD + ++
Sbjct: 714 IHTRSVND--LFAATAAAMEQLGLSIHDARIATSSNDWTLNTFIVLDDDGEPIRDPQRLE 771
Query: 89 YIQQRL--ETD-----------------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
I+ L E D F R + T +E T DRPGL
Sbjct: 772 EIRHHLVEELDDPADYPRIVTRHTSRQLKHFKVPTRVVIEQDTANARTIVELTAPDRPGL 831
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+ V + + + A+I T +R V +TD G + DP+R + ++E L L
Sbjct: 832 LARVGRIFMEQDIALSAAKIATLGERVEDVFFITD-KAGEPLTDPERQARLRERLCETL 889
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVI+ +T T++++ + ++ G+L +V ++ + ++ + A I++ G DVF +
Sbjct: 805 PTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ + D E +++RL
Sbjct: 865 TDKAGEPLTDPERQARLRERL 885
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI I RL+
Sbjct: 909 TDLVGQKISGDSKRSNITARLKA 931
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 811 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTKNRKKSKAF----- 846
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 847 -VIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 905
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + L+A + E+
Sbjct: 906 FYVTDLVGQKISGDSKRSNITARLKAVMAEEQDEL 940
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 859 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 918
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
D KR + L + D+ R+ P GI+
Sbjct: 919 DSKRSNITARLKAVMAEEQDELRERM----PSGII 949
>gi|307129818|ref|YP_003881834.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
gi|306527347|gb|ADM97277.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
Length = 893
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 693 VNKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R + I+Q L P +R + VG +PT
Sbjct: 753 FIVLEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHT 812
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGER 854
>gi|197106924|ref|YP_002132301.1| PII uridylyl-transferase [Phenylobacterium zucineum HLK1]
gi|238690153|sp|B4RC79.1|GLND_PHEZH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|196480344|gb|ACG79872.1| protein-P-II uridylyltransferase [Phenylobacterium zucineum HLK1]
Length = 938
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++DN +TV++ ++ G+L + + ++D L I A+I G +D F V+
Sbjct: 831 PAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYVV 890
Query: 75 DCDGKKIRD 83
D DG+K+ D
Sbjct: 891 DADGRKLTD 899
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKI--RDKEVIDYIQQRLETDASFAPSLR------ 105
V+ +S G +DVF V D G+ D + + + L A P R
Sbjct: 760 VMGARVFTSRAGQALDVFYVQDASGQPFGSHDPRALARLAETLACAARGEPVAREPRKPQ 819
Query: 106 -----SSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152
++ + P +E T +E +G DRPGL + + ++D ++++A I +
Sbjct: 820 DLGRTAAFAITPAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGY 879
Query: 153 NDRAAAVVHVTDHSTGYAIKDPKR 176
+RA +V D + G + D ++
Sbjct: 880 GERAVDAFYVVD-ADGRKLTDARK 902
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN+ + TVI+V +++ G+L + ++L+ NL I A+I + G +DVF V
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 75 DCDGKKI 81
D G KI
Sbjct: 913 DLHGAKI 919
>gi|85712036|ref|ZP_01043090.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
gi|85694222|gb|EAQ32166.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
Length = 873
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I + T + V ++ + V VL+ L I A I ++ G+ MD F +
Sbjct: 681 PLILIGDENNYGTTELFVYHHDEGHLFAAVAGVLDSQQLTILDAQILATRDGFVMDTFVL 740
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDASFAP--------SLRSSVGVMPTEEH- 116
+ +GK + + + ++D + +R + + P S+++ V +P +
Sbjct: 741 LQRNGKPLTETRRIEEVKQHLLDVLHRRRKVPKNNRPLSRRLKNFSVKTQVNFLPVKHRG 800
Query: 117 -TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T+ E DRPGL + + A+L L +++ A+I T ++A + V+ H G A+ D +
Sbjct: 801 RTTFELVALDRPGLVARIAAILQRLDVSLLAAKITTIGEQAEDLFIVSSHR-GEALSDEQ 859
Query: 176 RLSTIKEL 183
+L+ +++
Sbjct: 860 KLALKQQI 867
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 239 RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
RPQVT+ N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 833 RPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYV 892
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEV 329
R + G+ I++E + ++ L+A + + E+
Sbjct: 893 RDLVGMKITNENRQTNIVARLKAVLAKEDDEL 924
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V I N TVI+++ +++ G+L ++ VL+D++L I A+I++ G +D F V
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 894 DLVGMKITNENRQTNIVARLKA 915
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ +VL+DL ++ +A I T ++ +V D G I
Sbjct: 843 SNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRD-LVGMKIT 901
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R + I L VL DD + + PPG++
Sbjct: 902 NENRQTNIVARLKAVLAKEDDELRDQM---PPGMI 933
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + V++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPKRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTD-AQN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S +++ + L
Sbjct: 866 QPLSDPQLCSRLQDAIVEQL 885
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ AV+ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
PKR+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPKRVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F++ P+S
Sbjct: 853 RVEDVFFVTDAQNQPLS 869
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF V D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSRLQ 878
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
E+I+ + + +F R +G + + +E G DRPGL SE+ L+DL ++
Sbjct: 813 EIIEKRARPRRSTRAFRVEPRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDI 872
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+A I T ++ +VTD TG I P RL I L L
Sbjct: 873 ASAHITTFGEKVIDTFYVTD-LTGQKIVSPDRLDAICRALLETL 915
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +V+++ +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + +D I + L
Sbjct: 892 DLTGQKIVSPDRLDAICRAL 911
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 30/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + + N+V+A+I+T A + + + +R
Sbjct: 734 TEVTVFAPDHPRLLSVIAGACSAAGANIVDAQIFTTTHGRALDTILIGREFDFDEDERRR 793
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I L+ +VL G KT L P I+ + R R RVE
Sbjct: 794 AERIGRLIEDVLSG-------KTYL--PEIIEKRAR-----------PRRSTRAFRVE-- 831
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N + ++V+ ++ DRP LL ++ TL+D+ + + T + F
Sbjct: 832 ---PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTF 888
Query: 296 YIRHVDGLPISS----EAERERVIQCLEAAIERRA 326
Y+ + G I S +A +++ LE ++R A
Sbjct: 889 YVTDLTGQKIVSPDRLDAICRALLETLEHGVQRPA 923
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T IE TG DRPGL ++ ++ L N+ +A + T +R V +VTD G I P
Sbjct: 880 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPT 938
Query: 176 RLSTIKELLFNVLRGYDDFR 195
R + IK L ++L D R
Sbjct: 939 RQAAIKRALVHLLANPDTTR 958
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 75 DCDGKKI 81
D G +I
Sbjct: 928 DLMGAQI 934
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 27/224 (12%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DAS L VG T + D P L S V A N+V+A+I+T D
Sbjct: 750 ADAS-GKKLAIEVGFEEGRAVTELTLLAPDHPWLLSIVAGACAANGANIVDAQIYTTTDG 808
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A + +R S I E++ VL G K L P +M R
Sbjct: 809 LALDTIAISREYDRNEDEARRASRIGEMIEQVLEG-------KVRL--PEVMAR------ 853
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTD 274
R R + V VE P+V + N D YTVI + DRP LL+ + ++
Sbjct: 854 -----RTQARAKTKVFVVE-----PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 903
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ + V T FY+ + G I++ + + + L
Sbjct: 904 LSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAAIKRAL 947
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPNDE-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL ++ +A R +
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPDVI--------ATRAKNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL ++ L+D+ + + T +
Sbjct: 843 KAFIIPPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEQDEL 939
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMD 69
P V+I +++ T I + + K I +L+ NL I+ A I S G MD
Sbjct: 695 PLVIISDSSVLGEHAVTQIFIRADLKQNIFAATTTILDHFNLNIQSAQIHSATSSGHTMD 754
Query: 70 VFNVIDCDGKKI-RDKEVI------------------DYIQQRLETDAS-FAPSLRSSVG 109
F V+D D I ++ E++ D I++R+ F+ R+S+
Sbjct: 755 TFYVLDQDDLPIGQNPEIVTQIIDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTSIH 814
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ E+T +E DRPG + + +L + + +V A+I T +R + +TD + G
Sbjct: 815 NDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD-ADGN 873
Query: 170 AIKDP 174
+ DP
Sbjct: 874 PLSDP 878
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y+ +I+R P R I N+ + TV++V S ++ G L ++ ++L + N+
Sbjct: 788 DKYSDIIKRRIPRQLKYFSAPTRTSIHNDISNEYTVLEVISPDRPGFLARLARILVEYNI 847
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET 96
+ A I++ G D+F + D DG + D + + +Q + T
Sbjct: 848 ELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQLQHAICT 890
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
+VVIDN + +VI+V + + G L + Q + D L I KAYI+++ +DVF V
Sbjct: 562 ASKVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYV 621
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+D G+K+ D++ + Q L
Sbjct: 622 LDSRGRKLVDEDFRHEVTQGL 642
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 451 RSLVLASETEDAWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 508
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
++ LS + +G+ + + L+ M RL++ + Y
Sbjct: 509 ------VRSMDGLSFAE-------KGWRSLNE-QLDLAIEHRMGLSHRLYRKL--SSGYG 552
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
R + VG V K V + N + Y+VI + + D P L+ I + D +
Sbjct: 553 RRSQMVGEVASK-----VVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAY 607
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ T + FY+ G + E R V Q L +I R +
Sbjct: 608 IATEVEQLIDVFYVLDSRGRKLVDEDFRHEVTQGLLHSIGRES 650
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
VVIDN+T + AT++ V + ++ G+L + + + D++L + A I++ +DVF V D
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 77 DGKKIRD----KEVIDYIQQRLE 95
DG KI D K + D +Q+ L+
Sbjct: 854 DGNKILDEYSRKAIRDRVQRVLD 876
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV + + ATVI+V + + G+L ++ + L D + ++ A++
Sbjct: 785 YRKYPRRRGVHAPPPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEDAGVTVRSAHV 844
Query: 61 SSDGGWFMDVFNVIDCDG---KKIRDKEVIDYIQQRL 94
S+ G +D F V D G + +R EV +++ L
Sbjct: 845 STLGANAVDAFYVTDASGAPLQPMRAAEVAKEVERTL 881
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R ++
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRRKN 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|390436901|ref|ZP_10225439.1| PII uridylyl-transferase [Pantoea agglomerans IG1]
Length = 884
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + +AP S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSEWAPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN-- 72
P V IDN + AT++ V+ ++ G LL I L + L I++A + SD V +
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDREHKFYVTDMR 105
Query: 73 -----VIDCDGKKIRDKEVIDYIQQRLETDASFA---PSLRSSV---------------G 109
V ++IR + + +Q E+ A P+ R +V G
Sbjct: 106 TSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAPLGAKRG 165
Query: 110 VM--------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+ PT H+ + DRPGL +++ VL D++ NVV+AE+ T A +
Sbjct: 166 ISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNAMDRFN 225
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+T H G + DP T+ L + + +G
Sbjct: 226 ITYH--GEPLSDPMCQLTVNALQYYLSQG 252
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 108 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 167
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 168 TDLVGQKI 175
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 11 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 69
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G R+R I R+ ++ + V
Sbjct: 70 RAGTIGRMIEDVLSG------------------RKRLPEVIATRTRNRKKSKAFV----- 106
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 107 --IPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 164
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 165 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 199
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 118 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 177
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
D KR + + + D+ R+ A T SPP
Sbjct: 178 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATRTSPPA 219
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|357454137|ref|XP_003597349.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
gi|355486397|gb|AES67600.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
Length = 421
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 27/278 (9%)
Query: 21 NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKK 80
N D +I V+ +K G+ + + + L I K +S+DG W V VI
Sbjct: 16 GNKPGDPFIITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWVIP--QSI 73
Query: 81 IRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS----IEFTGTDRPGLFSEVCAV 136
+ + Y++ RL+ + P +S ++ +S ++F DR GL +V V
Sbjct: 74 LLPRMSYSYLKDRLQ---AICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKV 130
Query: 137 LADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
L +L + ++ T D + + VTD+ + KR + E L VL D
Sbjct: 131 LCELELTIQRVKVTTTPDGKVLDLFFVTDNME--LLHTRKRQNETCERLNAVLG--DSCI 186
Query: 196 KAKTSLSPP------GIMNRE----RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 245
K + L+ P GI + L Q D D +A+ K + +
Sbjct: 187 KCELQLAGPEYEHNQGISSLSPVLANELFQCELSDNDVR--SQALSPDMKKLKKANAALD 244
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
N + + +T++ ++ D LL+DI+ TL DM + + +G
Sbjct: 245 NSLSQAHTLLQIQCADHKGLLYDIMRTLKDMNFKISYG 282
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWF 67
++++ +DN+ T++++ + G+L +++ L D+N I ++ + G+
Sbjct: 233 MKKLKKANAALDNSLSQAHTLLQIQCADHKGLLYDIMRTLKDMNFKISYGRFLPNVMGYR 292
Query: 68 -MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTG 123
+D+F + DGKKI D E + + RL+ + P + P E +E +G
Sbjct: 293 DLDIF-IQQKDGKKILDPEKQNALCSRLKLEM-LHPLRVTIADRGPDTELLVANPVELSG 350
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F +V L L + +AE+
Sbjct: 351 NGRPRVFYDVTFALKTLGICIFSAEV 376
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQ---VLNDVNLVIKK 57
+A+L+R +N P +D +T + A + V H LL +I + N+V
Sbjct: 669 HARLLRELNNAQAPLATTVDLDTKSGAVELTV-VAQDHRRLLSIIAGACAASGANIVDAH 727
Query: 58 AYISSDGGWFMDVFNV----IDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSS---- 107
+ ++DG +F +D D + R + V DYI++ L E S A + RS+
Sbjct: 728 IFTTADGLALDTIFFSRAFPLDEDETR-RARRVADYIEKALRGEIAISEAVAARSAKDRS 786
Query: 108 --VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+ P + T IE +G DR GL ++ +++L+ N+ +A I T +RA
Sbjct: 787 LAFDIAPDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAV 846
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD TG I R +TIK L V
Sbjct: 847 DSFYVTD-LTGGKILSASRQATIKRQLLEVF 876
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
D KR + + + D+ R+ A T+ +PP
Sbjct: 918 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|372276073|ref|ZP_09512109.1| PII uridylyl-transferase [Pantoea sp. SL1_M5]
Length = 884
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + +AP S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSEWAPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|149190035|ref|ZP_01868312.1| PII uridylyl-transferase [Vibrio shilonii AK1]
gi|148836065|gb|EDL53025.1| PII uridylyl-transferase [Vibrio shilonii AK1]
Length = 874
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T + V ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLMSKNATRGGTEVFVYCQDQPALFATVVAELDRRNFNVHDAQIMTSKDGFVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G I R VI ++ LE AP ++++ V +PT+ +
Sbjct: 739 LDQHGDAIDVERHSAVIKHLVHVLEDGRPTRVKTRRAPRNLKHFNVKTQVDFLPTKGKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E D PGL ++V A A L N+ A+I T +RA + +T + G
Sbjct: 799 TLMELVALDAPGLLAKVGATFAQLGVNLHAAKITTIGERAEDLFILTSATGG 850
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|403713835|ref|ZP_10939894.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211941|dbj|GAB94577.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
Length = 792
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D +++V + ++ G+ VL L +++A +S+D G +D ++V G + D+
Sbjct: 615 GDGQLVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARA-DR 673
Query: 85 EVIDYIQQRLETD--ASFAPSLRSSVGV----------MP--TEEHTSIEFTGTDRPGLF 130
E ++ RL + AP R V V +P + T +E TDRPGL
Sbjct: 674 EALERAMLRLRSGDRRGLAPLSRRPVPVPDAPVTRALLVPDAAADATVLELRATDRPGLL 733
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+V LA L +V +A + T+ +A V++T+
Sbjct: 734 HDVGRCLAQLTVSVRSAHVATYCGQAVDTVYLTE 767
>gi|284992396|ref|YP_003410950.1| UTP-GlnB uridylyltransferase, GlnD [Geodermatophilus obscurus DSM
43160]
gi|284065641|gb|ADB76579.1| UTP-GlnB uridylyltransferase, GlnD [Geodermatophilus obscurus DSM
43160]
Length = 791
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+VGV + + G DR GLFS++ VLA +V A++ DRA AV
Sbjct: 588 AVGVEDVADGQQVTIVGPDRHGLFSQLAGVLALNQLDVRAAKVNVVGDRATAV------- 640
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
+A++ + + +L + +R + G + RL Q R+ +
Sbjct: 641 --FAVRPRFGRAPVASILADAVRAALE-----------GTLPLAERLRQ-----READYR 682
Query: 227 EKAVGRVEDKSSRPQVTVLNIE--KDYT-VITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
+ AV +++ P+++ N E D T ++ +R+ DR LL+ + L V
Sbjct: 683 QDAV-----RATPPRISWHNGEVTGDATGIVEVRAGDRAGLLYRLTAALATEGLDVTSAR 737
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERV 314
+ T +A FY+ + G PI SE +R RV
Sbjct: 738 IETLGADAADHFYVCNPSGEPIGSE-QRSRV 767
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
D KR + + + D+ R+ A T+ +PP
Sbjct: 918 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ + + KA
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVIATRARHRKKNKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|359483492|ref|XP_002273615.2| PREDICTED: glycogen phosphorylase 1-like [Vitis vinifera]
Length = 981
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +D D+T + + NK G+L + +V + L I KA + +G +F F V
Sbjct: 65 PTVTVDAAVSTDSTSFVIRARNKIGLLQVITRVFKVLGLHIDKATVEFEGDFFTQKFFVT 124
Query: 75 DCDGKKIRDKEVIDYIQQRL----------ETDASFAPSLRSSV----GVMPTEEHTSIE 120
D G+KI D+E +D I + L T+ S PS R V G+ P + +
Sbjct: 125 DSHGRKIEDQENLDRITKALLEAIDGGGGWGTETSVGPSTRGIVVRRAGLGPKPQAERM- 183
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
F DR L ++ ++ D+ + + H+ R + D + KDPKRL
Sbjct: 184 FALMDR-FLSNDPVSLQKDILDHAL-----AHSVRDRLIERWHDTQQYFKRKDPKRL 234
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N + T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLET------------DASFAPSLRSSVGVMPTE--------- 114
+G+ +R + ++ LET SFA + + + T+
Sbjct: 735 LNGELVRSER-----RRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKK 789
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTEE 848
Query: 175 KRLSTIKELLFNVLRG 190
+R LL NVL G
Sbjct: 849 ER-----GLLENVLYG 859
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ + + KA
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVIATRARHRKKNKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + HG+L ++ + L + ++ A+IS+ G +D F V
Sbjct: 752 PPRVSAVTGSSRTATVIEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYV 811
Query: 74 IDCDGKKI 81
D DG+ +
Sbjct: 812 TDPDGEPL 819
>gi|89053388|ref|YP_508839.1| PII uridylyl-transferase [Jannaschia sp. CCS1]
gi|88862937|gb|ABD53814.1| UTP-GlnB (protein PII) uridylyltransferase GlnD [Jannaschia sp.
CCS1]
Length = 914
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD-HSTGYAIKDP 174
T + F D PG+ + + L+ + NVV+A +T D A AV V D + Y
Sbjct: 725 TRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYEKARL 784
Query: 175 KRLSTI--KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKA 229
RL+T+ K L+ V+ ++ K I RER + I FD+ E
Sbjct: 785 PRLTTMIRKTLMGEVVASEAMEKRDK-------IKKRERPFNVPTTITFDNEGSE----- 832
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
YT+I + ++DRP LL+D+ L + + T
Sbjct: 833 --------------------IYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGV 872
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ FY++ GL + SE R + + L AI R A
Sbjct: 873 QVVDTFYVKDTFGLKLHSEPRRAALERKLRDAIARVA 909
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 821 PTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYV 880
Query: 74 IDCDGKKI 81
D G K+
Sbjct: 881 KDTFGLKL 888
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + + A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMRAVMAEEEDEL 939
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
D KR + + + D+ R+ A T+ +PP
Sbjct: 918 DSKRANITARMRAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|295687464|ref|YP_003591157.1| UTP-Glnb uridylyltransferase GlnD [Caulobacter segnis ATCC 21756]
gi|295429367|gb|ADG08539.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter segnis ATCC 21756]
Length = 940
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN+ DATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 834 PSVTVDNDASDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
G+KI + I+ ++ LE + + AP+ R +
Sbjct: 894 TAQGEKITETRRINALKADLLDALEQNEAGAPAARPGL 931
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+++ T +E +G DRPGL + LAD ++ +A I + +RA +V + G I
Sbjct: 843 SDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQT-AQGEKIT 901
Query: 173 DPKRLSTIKELLFNVL 188
+ +R++ +K L + L
Sbjct: 902 ETRRINALKADLLDAL 917
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|421082948|ref|ZP_15543827.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401702174|gb|EJS92418.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 903
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
N P V+I + T I + S ++ + V L+ NL + A I +S G MD F
Sbjct: 703 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 762
Query: 72 NVIDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT- 113
V++ DG + +D+ + I+Q LE + +P LR + V +PT
Sbjct: 763 IVLEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTH 820
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 821 TDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALK 879
Query: 173 DPKRLSTIKEL 183
RL + L
Sbjct: 880 PDLRLKLQERL 890
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DPKR 176
D KR
Sbjct: 918 DSKR 921
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 939
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 884 TDLVGQKI 891
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 34/245 (13%)
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
D+I+Q + + A +R+ TE I D P L + + A N+V+A
Sbjct: 702 DFIRQADKAGQALATMVRTDSFHAITE----ITVLSPDHPRLLAVIAGACAAAGANIVDA 757
Query: 148 EIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI 206
+I+T +D RA +HV+ A + +R TI ++ NVL G P I
Sbjct: 758 QIFTTSDGRALDTIHVSREFADDA-DELRRAGTIGRMIENVLAGRKRL--------PEVI 808
Query: 207 MNRER-RLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKL 264
R R R FD P V + N + +TVI + DRP L
Sbjct: 809 ATRTRNRKKSKAFD------------------IPPSVNITNSLSNKFTVIEVECLDRPGL 850
Query: 265 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
L +I L+D+ + + T + FY+ + G IS +++R + ++A +
Sbjct: 851 LSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAE 910
Query: 325 RASEV 329
E+
Sbjct: 911 EQDEL 915
>gi|260431485|ref|ZP_05785456.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415313|gb|EEX08572.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 939
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 47/253 (18%)
Query: 94 LETDASFAPSLRS----------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLH 141
L+T FA LR+ + + P E+ T F D PG+F+ + LA
Sbjct: 715 LDTHVEFAKMLRALEHSGDPGEMEIHLHPDEDRDATRACFAMADHPGIFARIAGALALAG 774
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
NVV+A +T D + G+ + RL +K+++ L+G R A +
Sbjct: 775 ANVVDARSYTTKDGYVTDAFWIQDADGHPF-EAARLPRLKQMIHKTLKGEVVARDALKTR 833
Query: 202 SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRS 258
I RE+ + I FD+ E YT+I + +
Sbjct: 834 DK--IKKREKAFNVPTHITFDNDGSE-------------------------IYTIIEVDT 866
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+DRP LL+D+ TL + + ++ T + FY++ + GL SE+++ + L
Sbjct: 867 RDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYYSESKQRTLEAKL 926
Query: 319 EAAI----ERRAS 327
AI ER AS
Sbjct: 927 RKAIAEGAERAAS 939
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 846 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYV 905
Query: 74 IDCDGKK 80
D G K
Sbjct: 906 KDMFGLK 912
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 785
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 786 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 818
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 819 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 878
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + ++A + E+
Sbjct: 879 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDEL 915
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 884 TDLVGQKI 891
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 834 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 893
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
D KR + + + D+ R+ A T+ +PP
Sbjct: 894 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 935
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDA-----------------SFAPSLRSSV 108
+ V+D DG I D K++ D + + L A +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 779 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 838
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 839 TDLVGQKI 846
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 28/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ + + +
Sbjct: 682 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPDDS-DELR 740
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ + KA
Sbjct: 741 RAATIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 776
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 777 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 835
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEV 329
FY+ + G IS +++R + L+A + E+
Sbjct: 836 FYVTDLVGQKISGDSKRANITARLKAVMAEEEDEL 870
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 789 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 848
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
D KR + L + D+ R+ P GI+
Sbjct: 849 DSKRANITARLKAVMAEEEDELRERM----PSGII 879
>gi|402824693|ref|ZP_10874039.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
gi|402261772|gb|EJU11789.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
Length = 917
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TV+++++ ++ +L ++ L + L++ A+I++ G D F V
Sbjct: 824 PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG 109
D G+KI I I++RL +A+ PSL +V
Sbjct: 884 DLLGEKITAAPRIKAIERRL-LEATSEPSLEEAVA 917
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 35/275 (12%)
Query: 56 KKAYISSDGGWF---MDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPSLRSSVGVM 111
KKA + + GG + ++ I D I + E D I + L + DAS L S
Sbjct: 663 KKAQVEAMGGAYAALVEKVGAILGDAYWIAEPE--DVIARNLIQLDASDDEPLSISTEYY 720
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + +D PGLF + + N+++A I H R V + +
Sbjct: 721 PARGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARI--HTTRTGRAV------DNFLV 772
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+DP L Y R+ + ++ + NR + L Q++ A
Sbjct: 773 QDP---------LGRPFMEYGQLRRLELTIEN-ALANRIKILPQLVAKP-------DARP 815
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R + RP+V N + +TV+ + ++DRP LL + L + + +V + T
Sbjct: 816 RADAFDVRPRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGER 875
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQ--CLEAAIE 323
A FY+ + G I++ A R + I+ LEA E
Sbjct: 876 AADTFYVTDLLGEKITA-APRIKAIERRLLEATSE 909
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 11 RMNPP----RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R N P +V IDN T T+++V + ++ G+L + +VL ++N +++A I+++G
Sbjct: 782 RRNIPLPVNKVKIDNKTSDRYTIVEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNR 841
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+D F + D + +KI D +++ I++++
Sbjct: 842 VIDSFYITDMEYRKITDAKLLKEIEEKI 869
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 831 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI + I RL+
Sbjct: 891 DLVGSKITSENRQMNIAARLKA 912
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 903 QMNIAARLKAVLAGEVDEARERM---PSGII 930
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V A+I T +D A + + A + +R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G +RL +++ RV+K R
Sbjct: 793 AASIGKLIEDVLSG-------------------RKRLPEVI---ASRTRVKK---RSRAF 827
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 828 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 887
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y+ + G I+SE + + L+A +
Sbjct: 888 YVTDLVGSKITSENRQMNIAARLKAVL 914
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP +VIDN + TVI+V ++++ G+L + + +D+ L I A+I++ G +DVF V
Sbjct: 831 PPDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYV 890
Query: 74 IDCDGKKIRDK 84
+K+ D+
Sbjct: 891 TGPGKQKVTDE 901
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-RDKEVID------------------YIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I + E ID IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALIKELQQENEQQPSPSSI 898
>gi|253687335|ref|YP_003016525.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259492002|sp|C6DAI1.1|GLND_PECCP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|251753913|gb|ACT11989.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 904
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 703 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 822
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 881
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 882 ELRLKLQERL 891
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +VVI N+ D TV+ + ++++ G+L + ++ L+++ A I++ G DVF V
Sbjct: 805 PTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFV 864
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +G + D E+ ++Q L
Sbjct: 865 TDLNGDPVSDPELCQHLQDTL 885
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 29/209 (13%)
Query: 8 LIRRMNP--PRVVIDNNTCADATV-----IKVDSVNKHGILLQVIQVLNDVNLVIKKA-Y 59
L+ R NP P V+I N I + + + + + L+ + L I A
Sbjct: 682 LLGRPNPEDPLVLIRENQMGQGQTEGGSQIFIYTPDTQNLFAATVNALDSLGLTIMDARI 741
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEV-IDYIQQRLETDASFAPSLRSSVGV-------- 110
I+S G+ +D + V+D G I D I++I+Q L ++V
Sbjct: 742 ITSADGFSLDTYIVLDEHGTPIGDDWPRIEHIRQTLTETLKHPEKFGTTVSRRMPRRHKH 801
Query: 111 --MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
+PT+ + T ++ DRPGL + + + V NA I T +R V
Sbjct: 802 FDVPTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDV 861
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
VTD G + DP+ +++ L L
Sbjct: 862 FFVTD-LNGDPVSDPELCQHLQDTLMQEL 889
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +QQ
Sbjct: 861 TDADNQPLSDPQLCLRLQQ 879
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V++ DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ + L+ ++ + + +S+
Sbjct: 868 LSDPQLCLRLQQAIIKELQQENEQQPSPSSI 898
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L T + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIIQQLQA 887
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A +A L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRTPEDY---------PAIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E +IQ L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIIQQLQAGQASEAS 894
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + ++ ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|114321016|ref|YP_742699.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227410|gb|ABI57209.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
Length = 894
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V++ T + + + + + + + L+ + L I+ A I++D G+ +D + V
Sbjct: 693 PIVLVKQRGPRGGTELFIYARDNRYVFARTVSTLDRLGLNIQDARIITTDQGYTLDSYLV 752
Query: 74 IDCDGKKIRDKEVIDYIQQRLET---DASFAPSL-------RSSVGVMPTE--------- 114
++ +G+ + D+ + +RL T DA P L R PT+
Sbjct: 753 LEDNGEPVTDEGRCREMVERLRTSLADAHRPPDLAEHRLPRRLKHFSTPTQINFSTDGPN 812
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E DRPGL ++V + + NA+I T +RA V +TD + DP
Sbjct: 813 QRTVLELITGDRPGLLAQVGQAFSQCRVKLKNAKIATIGERAEDVFFITD-DQDEPLADP 871
Query: 175 KRLSTIKELLFNVL 188
+ ++++L + L
Sbjct: 872 VQFRCLRDVLSDCL 885
>gi|407070690|ref|ZP_11101528.1| PII uridylyl-transferase [Vibrio cyclitrophicus ZF14]
Length = 873
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRS 106
G +D F V+D GK I R K V ++ L A P+ +++
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLVHVL---ADGRPTKIKTRRTPRNLQHFKVKT 786
Query: 107 SVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
V +PT+ +HT +E D PGL +EV A A+L N+ A+I T +RA + +T
Sbjct: 787 LVEFLPTKSKKHTLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTS 846
Query: 165 HSTG 168
+ G
Sbjct: 847 DAGG 850
>gi|238751453|ref|ZP_04612945.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
gi|238710320|gb|EEQ02546.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
Length = 892
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V+I T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKEVI--DYIQQRLETDASF--------APSLR-----SSVGVMPT--EE 115
++ DG + +D+ I D +QQ + T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIRDALQQAM-TQPNYQHPRVRRLSPKLRHFSVPTETNYLPTHNER 815
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 816 RTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGER 855
>gi|398795140|ref|ZP_10555055.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
gi|398206971|gb|EJM93727.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
Length = 884
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + + P R + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL ++ A I T +R + + D
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V++ N TVI+V+ +++ G+L + VL D++L I A I++ G +D F V
Sbjct: 826 PPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAP-SLRSSVGVMPT 113
D G+K+ ++ I RL+ S LRS MPT
Sbjct: 886 TDLVGQKVVNENRQGNIAARLKAVMSEQEDELRSG---MPT 923
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFA--PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
GKK R EVI + + + +F PS+ S G+ + + T IE DR GL +++ A
Sbjct: 802 GKK-RLPEVIATRAKSRKRNKTFTIPPSVILSNGL--SNKFTVIEVECLDRTGLLADITA 858
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
VLADL ++ +A I T ++ +VTD G + + R I L V+ +D
Sbjct: 859 VLADLSLDIHSARITTFGEKVIDTFYVTD-LVGQKVVNENRQGNIAARLKAVMSEQEDEL 917
Query: 196 KAKTSLSPPGIM 207
+ S P GI+
Sbjct: 918 R---SGMPTGII 926
>gi|261211379|ref|ZP_05925667.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
gi|260839334|gb|EEX65960.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
Length = 876
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTLKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E D PGL + V A A+L+ ++ A+I T +RA + +T+ +D
Sbjct: 797 KRTLMELVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEDE 856
Query: 175 KRL 177
++L
Sbjct: 857 EQL 859
>gi|238792757|ref|ZP_04636388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
gi|238727865|gb|EEQ19388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
Length = 880
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 685 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 744
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 745 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 804
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 805 TYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGER 843
>gi|255556900|ref|XP_002519483.1| amino acid binding protein, putative [Ricinus communis]
gi|223541346|gb|EEF42897.1| amino acid binding protein, putative [Ricinus communis]
Length = 409
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T++++ + G+L +++ L D N+ I + I +D+F ++
Sbjct: 232 VTMDNSLSPGHTLVQIACQDHKGLLYDIMRTLKDYNIKISYGRFSIKQRRNCEIDLF-IV 290
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + RLE + P + V P E +E +G RP +F
Sbjct: 291 QADGKKIVDPSKQGALCSRLEMEL-LRPLRVAVVSRGPDIELLVANPVELSGNGRPLVFH 349
Query: 132 EVCAVLADLHCNVVNAEI--WTHNDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVL 188
++ L L + +AEI DR V V D G ++ P+ S I+E ++N+L
Sbjct: 350 DITLALKMLSTGIFSAEIRRCMIGDREYEVYRVLLDEGEGLSV--PR--SKIQERVWNML 405
Query: 189 RGYD 192
G+D
Sbjct: 406 MGWD 409
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD A +RR RV +DN++ T+++V + ++ G+L ++ L L I A I+
Sbjct: 772 DDNSASALRR---ERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIA 828
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQR-LET 96
+ +DVF V D DG+K+ E +D I+Q LET
Sbjct: 829 TKADQVVDVFYVRDFDGQKVDSPESVDAIKQTVLET 864
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 54/253 (21%)
Query: 84 KEVIDYIQ--QRLE-TDASF--APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLA 138
KE++D+I+ +RL+ DA APS +++ ++ DRPGLFS++ VL
Sbjct: 653 KEIVDHIRLYERLQGADAVIEAAPSRDANL--------RTVTVCAKDRPGLFSKIAGVLT 704
Query: 139 DLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK 198
+ N+ +A+I+T + A + F V D + +
Sbjct: 705 LNNLNIFDAQIFTWRNHTAMDI------------------------FQVSPPLDSLFEKR 740
Query: 199 TSLSPPGIMNRERRLHQIMFDDRDYERV--EKAVGRVEDKSS----RPQVTVLNIEKD-Y 251
T ER L +++ + D + +K V + +D S+ R +V+V N +
Sbjct: 741 T------WQRVERDLGKVLSGEMDLSKALEDKPVAKSDDNSASALRRERVSVDNDSSGFF 794
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL----PISS 307
T++ + + D+ LL+ I L ++ + T + FY+R DG P S
Sbjct: 795 TIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRDFDGQKVDSPESV 854
Query: 308 EAERERVIQCLEA 320
+A ++ V++ L
Sbjct: 855 DAIKQTVLETLHG 867
>gi|390169710|ref|ZP_10221643.1| PII uridylyl-transferase [Sphingobium indicum B90A]
gi|389587714|gb|EIM65776.1| PII uridylyl-transferase [Sphingobium indicum B90A]
Length = 919
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 30/209 (14%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
P +L+ I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLTRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLE 319
A FY+ + ++ + E + +Q LE
Sbjct: 878 AVDTFYVTDL----LAGKIESKGRLQTLE 902
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI K + +++RL
Sbjct: 886 DLLAGKIESKGRLQTLERRL 905
>gi|260772220|ref|ZP_05881136.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
gi|260611359|gb|EEX36562.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
Length = 881
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQ--------RLETD------ASFAPSLRSSVGVMPTE-- 114
+D +G+ I R +I ++ RL+T F ++R+ V +PT+
Sbjct: 739 LDHNGQAIEENRHHALIKHLTHVLTDGRPTRLKTRRIPRNLQHF--TVRTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +E D PGL + + A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMELVALDTPGLLATIGATFAELNLDLHGAKITTLGERAEDLFILTN 846
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 831 PEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI + I RL+
Sbjct: 891 DLVGSKITSENRQMNIAARLKA 912
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 78 GKKIRD-----KEVIDYIQQRLETDA---SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
GK I D K++ D I R + +F + ++ + + T IE G DR GL
Sbjct: 797 GKLIEDVLSGRKKLPDVIASRTRSKKRSRAFTVTPEVTISNALSNKFTVIEVEGLDRTGL 856
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
SEV AVL+DL ++ +A I T ++ +VTD G I R I L VL
Sbjct: 857 LSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENRQMNIAARLKAVLA 915
Query: 190 GYDDFRKAKTSLSPPGIM 207
G D + + P GI+
Sbjct: 916 GEVDEARERM---PSGII 930
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 26/207 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V A+I T +D A + + A + +R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R + R
Sbjct: 793 AASIGKLIEDVLSGRKKL--------PDVIASRTR-----------------SKKRSRAF 827
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 828 TVTPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 887
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y+ + G I+SE + + L+A +
Sbjct: 888 YVTDLVGSKITSENRQMNIAARLKAVL 914
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN +ATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 856 PTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 915
Query: 75 DCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
+G K+ D + ++ LE + + APS R +
Sbjct: 916 TSEGGKLADVRKVTTLKADLLAALEQNEAGAPSTRPGL 953
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKI- 81
A+A I V + ++ G+ + ++ + N+V + + S G +DVF+V D G +
Sbjct: 755 ANAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQG-QALDVFHVQDVTGAPLG 813
Query: 82 -RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT--------EEHTSIEF 121
+ + + LE P S ++ + PT E T +E
Sbjct: 814 CENPRALRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEA 873
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+G DRPGL + LAD ++ +A I + +RA +V S G + D ++++T+K
Sbjct: 874 SGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-SEGGKLADVRKVTTLK 932
Query: 182 ELLFNVL 188
L L
Sbjct: 933 ADLLAAL 939
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 32/182 (17%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYAI--KDPKRLSTIK 181
DR GLF+++ ++ L NVV A ++T +A V HV D TG + ++P+ L +
Sbjct: 766 DRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQD-VTGAPLGCENPRALRRMA 824
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
+ L RG P +M R Q R S P
Sbjct: 825 DALEAAGRG------------EPLVMEPRRGGEQ---------------SRTAAFSIAPT 857
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V V N + TV+ +DRP LL + TL D + ++ A FY++
Sbjct: 858 VVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTS 917
Query: 301 DG 302
+G
Sbjct: 918 EG 919
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP VV+ ADATV +V + ++ G+L + ++L+D L ++ A + + G +DVF V
Sbjct: 683 PPPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYV 742
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D GK + + + +++ LET
Sbjct: 743 TDTAGKPL-SEAAAEEVRRALET 764
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 75/199 (37%), Gaps = 33/199 (16%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKEL 183
D+PGL VLA LH V A T D A V V D Y + DP RL +E
Sbjct: 600 DQPGLLWRSAGVLA-LHRLGVRAARATSIDSTA--VTVFDVEPEYLAEIDPDRL---RED 653
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 243
L L G D A R + + + P V
Sbjct: 654 LRRALDGSLDLSAA-------------------------LARRSAGAAQRQPAAPPPVVL 688
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ D TV +R+ DRP LLF I L+D V V T +A FY+ G
Sbjct: 689 LPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTAGK 748
Query: 304 PISSEAERERVIQCLEAAI 322
P+ SEA E V + LE A+
Sbjct: 749 PL-SEAAAEEVRRALETAL 766
>gi|224109552|ref|XP_002315234.1| predicted protein [Populus trichocarpa]
gi|222864274|gb|EEF01405.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
V +DN T++++ V++ G+ ++++ D+N+ + SS G MD+F V
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRNMDLF-VQ 301
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D +++D + RL+ + P P E +E G RP +F
Sbjct: 302 QTDGKKILDPKLLDNLCSRLKEEM-LHPLRVIITNRGPDTELLVANPVELCGKGRPRVFY 360
Query: 132 EVCAVLADLHCNVVNAEIWTHN 153
+V L L + +AEI H+
Sbjct: 361 DVTLALKKLGICIFSAEIGRHS 382
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI-- 74
++ N+ D T++ V+ +K G+ + +++ + L I +A +DG W V V+
Sbjct: 10 LIQQGNSPHDPTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQL 69
Query: 75 --------DCDGKKIRDKEVID------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
D D K R V Y Q+L +S APS+ ++
Sbjct: 70 QHSNLLRLDWDSLKNRLLRVSPPCLTPLYYDQKL-NGSSAAPSV------------YLLK 116
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLST 179
F DR GL +V VL +L + ++ T D + + +TD K KR
Sbjct: 117 FCCVDRKGLLHDVTEVLTELEFTIQRLKVMTTPDGKVVDLFFITDGRELLHTK--KRRDD 174
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQI-------MFDDRDYERVEKAVGR 232
L++V R Y + L+ P + +R L + +F E+ E +
Sbjct: 175 TCRYLYDVFREY--CIGCELQLAGPEC-DTQRNLSSLPLVVAEELFSCELSEK-ESCMQA 230
Query: 233 VEDKSSRPQ---VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
+ ++ P+ VTV N + +T++ ++ D+ L +DI+ D+ V +G ++
Sbjct: 231 LRTATTSPKKAIVTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSS- 289
Query: 289 TEAYQ--EFYIRHVDG 302
+ Y+ + +++ DG
Sbjct: 290 IKGYRNMDLFVQQTDG 305
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 748 YIVLDNDGDSIGDNPVRVKQIRDGLTDALRNPDDYPTIIQRRVPRQLKHFTFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 864
Query: 169 YAIKDPKRLSTIKELLFNVLR 189
+ DP+ S +++ + LR
Sbjct: 865 LPLSDPQLCSRLQDAIVEQLR 885
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIQRRVPRQLKHFTFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + D ++ +Q
Sbjct: 840 SLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSRLQ 877
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV++ N TVI+V++ ++ G+L +++ L D + I A+I++ G +D F +
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+K+ + + ++ RL
Sbjct: 875 DLTGQKLDGSQRLKGLETRL 894
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 72 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP--TEEHTSIEFTGTDRPGL 129
++ D K+R +E + Q+ L + A +++ V V P + T IE DRPGL
Sbjct: 783 SIADVLAGKVRLRE--ELAQRPLPQRRADAFAVQPRVLVQPNASNRFTVIEVNAADRPGL 840
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L D + +A I T+ +RA ++TD TG + +RL ++ L N ++
Sbjct: 841 LYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTD-LTGQKLDGSQRLKGLETRLLNAVK 899
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 28/188 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIKDPK 175
T + D PGL + ++ N+++A I T D A + + H G D
Sbjct: 717 TQVRTYSEDHPGLLMRLAGAISLCGANIIDARIHTTRDGMALNNIGIQGHG-GQPFGDAH 775
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L +K + +VL G R+ P +R R +
Sbjct: 776 QLDRLKRSIADVLAGKVRLREELAQRPLP-----QR--------------------RADA 810
Query: 236 KSSRPQVTVL-NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
+ +P+V V N +TVI + + DRP LL+ ++ TL D + + + T A
Sbjct: 811 FAVQPRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDT 870
Query: 295 FYIRHVDG 302
FY+ + G
Sbjct: 871 FYMTDLTG 878
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEV 329
+ G ++++ + + Q L+A + + E+
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDEL 917
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ V++D++L I A++++ G +DVF V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G +I + I+++L
Sbjct: 894 DLVGHQITNTTRQSRIRKKL 913
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F + R + + + T IE G DRPG+ SE+ V++DL ++ +A + T ++
Sbjct: 829 AFKITPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +VTD G+ I + R S I++ L +
Sbjct: 889 VFYVTD-LVGHQITNTTRQSRIRKKLLALF 917
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E+DAS +L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 ESDAS-GKTLATMVKTHDFEGVTEITVLSPDHPRLLSVIAGACAAAGANIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + + L+ +VL G KT L P + R +
Sbjct: 774 GRALDTILISREFSTDDDERRRATRVGRLIEDVLSG-------KTYL-PEMLAARTKP-- 823
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 273
+R KA P+V + N + +TVI + DRP +L +I ++
Sbjct: 824 ---------KRAAKAF------KITPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVIS 868
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
D+ + V T + FY+ + G I++ + R+ + L A
Sbjct: 869 DLSLDIASAHVTTFGEKVIDVFYVTDLVGHQITNTTRQSRIRKKLLA 915
>gi|168031081|ref|XP_001768050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680688|gb|EDQ67122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 45/219 (20%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNV 73
P V+ID + A+AT++++ ++ G LL I+ L D+ L + + ++++G F V
Sbjct: 7 PIVLIDQESDAEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGPNLRRKKFLV 66
Query: 74 IDCD-GKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE-------- 115
D KK+ D E+++ I Q E+ A + + G P ++
Sbjct: 67 TRLDNNKKVEDPELLEAIRLTIINNLLQYHPESGEQLA--MGVAFGENPPKKEIDVDVAT 124
Query: 116 HTSIEFTGT---------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDR------AAAVV 160
H ++ G+ DRPGL E+ V+ D+ V +AEI T D A
Sbjct: 125 HVTVTREGSRSLLSVETADRPGLLLEILKVICDISIYVESAEIDTEADFLHFGLVAKDKF 184
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+VT H + +++E+L N LR Y R+ +T
Sbjct: 185 YVTYHGEVLS-------KSMEEVLTNALRYY--LRRPET 214
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEV 329
+ G ++++ + + Q L+A + + E+
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDEL 917
>gi|227326535|ref|ZP_03830559.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 904
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 703 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 822
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 881
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 882 DLRLKLQERL 891
>gi|227114685|ref|ZP_03828341.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 937
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 736 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 795
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 796 FIVLEPDGSPLAQDRHEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 855
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 856 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 914
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 915 DLRLKLQERL 924
>gi|224056635|ref|XP_002298947.1| predicted protein [Populus trichocarpa]
gi|222846205|gb|EEE83752.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV-FNVIDCD 77
+DN+ T++++ + G+L +++ L D N+ I S + G D+ ++ D
Sbjct: 237 MDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFSMNHGRACDIDLFLVQTD 296
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSEVC 134
GKKI D + RLE + P ++V P E +E +G RP +F ++
Sbjct: 297 GKKIVDPRKQKALSSRLEMEL-VRPLRVATVSRGPDTELLVANPVELSGKGRPLVFHDIT 355
Query: 135 AVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
L L+ + +AEI DR V V D G A+ P+ S I++ ++ +L G+
Sbjct: 356 LALKMLNTCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PR--SKIEKQVWKMLMGW 411
Query: 192 D 192
+
Sbjct: 412 E 412
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH--VTDHSTGYAIKDPKRLSTIKE 182
DR GL +++C VL + +V+NA+I+T D +A + + + Y KD + ++
Sbjct: 674 DRRGLLAKICGVLGLHNLSVLNAQIFTWKDGSAVDILDVLPEDGVEYEEKDWQAINDDLN 733
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L N H++ R Y+++ +GR + + ++
Sbjct: 734 LALN---------------------------HRLGLGHRLYKKLSSGIGRAKRSTGTNEI 766
Query: 243 TVLNIEK---DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
V+ K +YTV+ + S D P L+ I TL D ++ + T + FY+
Sbjct: 767 RVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFYV 824
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N RVV+DN + TV++V S + G L ++ Q L D + I +A+I+++ +DVF
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 73 VIDCDGKKIRDKEVI 87
V+D +KI + I
Sbjct: 824 VLDSQQEKIVEPAFI 838
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 29/202 (14%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFM 68
PP V+I T + T I + + ++H + ++ +NL I A I+S + +
Sbjct: 3 GPPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTL 62
Query: 69 DVFNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRS 106
D + V+D DG I D E + DY IQ+R+ +FAP +
Sbjct: 63 DTYIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV-- 120
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
++ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 121 TIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-A 179
Query: 167 TGYAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 180 NNQPLSDPLLCSRLQDAIVEQL 201
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 18 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 77
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR--ERRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 78 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 116
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 117 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 168
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 169 RVEDVFFITDANNQPLS 185
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 97 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 156
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 157 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 194
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
EVI+ + +F R+ V + + IE DRPGL SEV +VL+DL ++
Sbjct: 792 EVIEKRTKPRRGTKAFRIEPRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDI 851
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+A I T ++ +VTD TG + +P RL I+ L +
Sbjct: 852 ASAHITTFGEKVIDTFYVTD-LTGSKVDNPDRLEVIRRELIETI 894
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR + N +VI+++ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107
D G K+ + + ++ I++ L P R++
Sbjct: 871 DLTGSKVDNPDRLEVIRRELIETIENGPPRRNN 903
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEV 329
+ G ++++ + + Q L+A + + E+
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDEL 917
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEV 329
+ G ++++ + + Q L+A + + E+
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDEL 917
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ +MP
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTLALQSEKLPALSIMPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A
Sbjct: 773 LQHFIVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|145635426|ref|ZP_01791127.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
gi|145267300|gb|EDK07303.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
Length = 157
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 14 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSKKLPALSITPNRQ 66
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 67 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 126
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 127 EDFFILTNQF-GQALDSQQR-----EILRNVL 152
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TVI+V++ ++ +L ++ +VL + LV+ A+I+ G +D F V
Sbjct: 825 PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVT 884
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G K+ E D ++ RL
Sbjct: 885 DLTGGKLAGGERQDRLEARL 904
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD-- 83
AT++ V + + G+ ++ ++ I A I +S GW +D F V D G R+
Sbjct: 726 ATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTGWALDNFLVQDPHGAPFREEQ 785
Query: 84 ------KEVIDYIQQRLETDASFA----PSLRS-SVGVMP--------TEEHTSIEFTGT 124
K + D + R++ A P RS + V P + T IE
Sbjct: 786 QLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSPRVLFDNKASNRFTVIEVNAR 845
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRP L + + VL + V +A I + +RA +VTD + G
Sbjct: 846 DRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDLTGG 889
>gi|307245459|ref|ZP_07527547.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254413|ref|ZP_07536251.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258872|ref|ZP_07540604.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853800|gb|EFM86017.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862712|gb|EFM94668.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867223|gb|EFM99079.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 850
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N AT I + ++ + L++ Q+L+ + I A I +S G +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 IDCDGKKIRDKEVIDYIQQRLET------------------DASFAPSLRSSVGVMPTEE 115
+ +GK + + + I+Q LE SF + +
Sbjct: 719 TELNGKPLEEMRC-EQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ E DR GL + V +V L N+VNA+I T +R VT
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVT 825
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 913 DLVGAKITNENRQINIAARLKA 934
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I
Sbjct: 862 SNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKIT 920
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ R I L VL G D + + P GI+
Sbjct: 921 NENRQINIAARLKAVLAGEVDEARERM---PSGII 952
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V+A+I T +D A + + + +R
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFSVDEDEMRR 814
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R A R +
Sbjct: 815 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------AKKRSKAF 849
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 850 TVTPEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 909
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y+ + G I++E + + L+A +
Sbjct: 910 YVTDLVGAKITNENRQINIAARLKAVL 936
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVI N+ D T + + ++++ G+L + ++ L+++ A I++ G DVF +
Sbjct: 796 PTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFI 855
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +G+ + D + +QQ L
Sbjct: 856 TDLNGEPVSDPALCQQLQQTL 876
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 27/207 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L++R P P V+I + A + I + + + + + L+ + L I A I+
Sbjct: 675 LLQRDTPDDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNALDSLGLTIMDARIIT 734
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV-MP------- 112
S G+ +D + V+D G I D I+ I++ L ++V MP
Sbjct: 735 SADGFSLDTYIVLDEHGTPIGEDLARIEQIRKTLTETLKHPERFATTVSRRMPRRNKHFD 794
Query: 113 -----------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
T + T+++ DRPGL + + + V NA I T ++A V
Sbjct: 795 VPTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFF 854
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVL 188
+TD + G + DP +++ L L
Sbjct: 855 ITDLN-GEPVSDPALCQQLQQTLIQEL 880
>gi|238784877|ref|ZP_04628877.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
gi|238714194|gb|EEQ06206.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
Length = 892
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGER 855
>gi|56459955|ref|YP_155236.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina loihiensis
L2TR]
gi|81170618|sp|Q5QXT0.1|GLND_IDILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56178965|gb|AAV81687.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina loihiensis
L2TR]
Length = 879
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I + T + + + + V VL+ L I A I ++ G+ MD F V
Sbjct: 687 PLILIGDENNYGTTELFIYHHEEGHLFASVAGVLDSQQLNILDAQILATRDGFVMDTFVV 746
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDASFAP--------SLRSSVGVMPTEEH- 116
+ DGK + + ++++D + +R+ ++ P S+ + V +P++ H
Sbjct: 747 LQRDGKPLTEPHRIEEVKQQLLDVLHKRIPVPSTKRPLSRRMKNFSVATEVTFIPSKHHG 806
Query: 117 -TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV-TDHSTGYAIKDP 174
T+ E DRPGL +++ A+L + ++ A+I T ++A + V T+ T + K
Sbjct: 807 RTTFELVTLDRPGLIAKLAAILQQQNVILLAAKITTIGEQAEDLFIVTTEQQTALSDKQK 866
Query: 175 KRLST--IKELLF 185
K L IK+L F
Sbjct: 867 KTLKAKIIKDLEF 879
>gi|251790747|ref|YP_003005468.1| PII uridylyl-transferase [Dickeya zeae Ech1591]
gi|247539368|gb|ACT07989.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya zeae Ech1591]
Length = 893
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 696 PMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 755
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT--EEH 116
++ DG + R + I+Q L P +R + VG +PT +
Sbjct: 756 LEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHNDRR 815
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 816 SYMELVALDQPGLLARVGEVFADLNLSLHGARISTIGER 854
>gi|238796605|ref|ZP_04640112.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
gi|238719583|gb|EEQ11392.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
Length = 892
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGER 855
>gi|238759952|ref|ZP_04621106.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
gi|238701859|gb|EEP94422.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
Length = 764
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 569 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 628
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFAP-------------SLRSSVGVMPT--EEH 116
++ DG + +D+ +I Q+ T ++ P S+ + +PT E
Sbjct: 629 LEPDGSPLAQDRHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEANFLPTHNERR 688
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 689 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGER 727
>gi|90580969|ref|ZP_01236770.1| PII uridylyl-transferase [Photobacterium angustum S14]
gi|90437847|gb|EAS63037.1| PII uridylyl-transferase [Vibrio angustum S14]
Length = 873
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V S +K + V+ L+ NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL-----ETDASFAP------SLRSSVGV 110
G+ +D F V+D +GK I R + + + L E AP ++++ V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTTIRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVSF 791
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA-AVVHVTDHST 167
+PT+ + T +E D PGL ++V AV A+ + ++ A+I T +RA + V D
Sbjct: 792 LPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERAEDFFILVNDQGC 851
Query: 168 GYAIKDPKRL 177
+++ K L
Sbjct: 852 NLSVEQQKVL 861
>gi|344339494|ref|ZP_08770423.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
gi|343800798|gb|EGV18743.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P VVI T T I + + ++ + ++ +L+ V L I A I +++GG ++ + V
Sbjct: 688 PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQV 747
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS--------FAPSLRSSVGVMPTE----------- 114
+D DG I D ++ I+ L D + A S+ PTE
Sbjct: 748 LDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPN 807
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
T + DRPGL +EV AV + + NA+I T
Sbjct: 808 RRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIAT 844
>gi|398801948|ref|ZP_10561179.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
gi|398090630|gb|EJL81097.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
Length = 884
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T+I+V + ++ G+L ++ Q+ + +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ D + + D ++ +QQ L
Sbjct: 861 TNADNQPLSDLQLCTQLQQAL 881
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA--------------------SFAPSLRSSVG 109
+ V+D DG I D E I I+Q L T+A FA + ++
Sbjct: 749 YIVLDADGAPIGNDPERIQEIRQGL-TEALRNPEDYLTIIKRHVPRQLKHFAFPPQVTIH 807
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
T IE DRPGL + + + + +V NA+I T +R V VT+ +
Sbjct: 808 NDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTN-ADNQ 866
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ D + + +++ L L ++ + + +S+
Sbjct: 867 PLSDLQLCTQLQQALVKQLSQENEHQPSPSSI 898
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AK + P R+ +DN++ A+ T+I+V + ++ GIL ++ +N+ ++ A IS+ G
Sbjct: 749 AKSVPSRVPTRISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGE 808
Query: 66 WFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDA 98
DVF+V +G +I D +E+I ++ L ++
Sbjct: 809 SVFDVFHVEGPEGGRIEDHIHLRELISALEYSLTGNS 845
>gi|170768427|ref|ZP_02902880.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
gi|170122531|gb|EDS91462.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
Length = 890
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + +VI Y +++ T +++ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHDVIRYGLEQVLTQSTWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
E + +E D+PGL ++V + ADL ++ A I T +R
Sbjct: 812 ERKSFLELIALDQPGLLAQVGKIFADLGISLHGARITTIGER 853
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 31/219 (14%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 153
E +AS AP L + V+ T + +D PGLFS + LA +V+A I T N
Sbjct: 721 EAEASGAP-LSVATRVLEARAVTEVTVYCSDHPGLFSRIAGALAVAGATIVDARIHTMTN 779
Query: 154 DRAAAVVHVTD---HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
A V D G A +L+ + L+ L G
Sbjct: 780 GMALDTFWVQDAQPGGAGGAFDASHKLARLSVLIEQALSG-------------------- 819
Query: 211 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIV 269
RL+ + ++ +V + R+ +V + N + +TVI + +DRP LL D+
Sbjct: 820 -RLNLV----QEIRKVRREPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVT 874
Query: 270 CTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
+++ + + T A FY++ V GL + ++
Sbjct: 875 AAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVEND 913
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
E A+L P RVVIDN TVI+++ ++ G+L V +++ L I A+I++
Sbjct: 833 EPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTY 892
Query: 64 GGWFMDVFNVIDCDGKKIRD 83
G +DVF V D G K+ +
Sbjct: 893 GVRAVDVFYVKDVFGLKVEN 912
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSQWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSNGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDNFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLET------------DASFAP-------SLRSSVGVMP--TE 114
+G+ +R + ++ LET SFA ++++ V + +
Sbjct: 735 LNGELVRSER-----RRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKK 789
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTEE 848
Query: 175 KRLSTIKELLFNVLRG 190
+R LL NVL G
Sbjct: 849 ER-----GLLENVLYG 859
>gi|385872915|gb|AFI91435.1| [Protein-PII] uridylyltransferase [Pectobacterium sp. SCC3193]
Length = 903
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 705 PLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 764
Query: 74 IDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT--E 114
++ DG + +D+ + I+Q LE + +P LR + V +PT +
Sbjct: 765 LEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTD 822
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 RRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKPD 881
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 882 LRLKLQERL 890
>gi|261822601|ref|YP_003260707.1| PII uridylyl-transferase [Pectobacterium wasabiae WPP163]
gi|261606614|gb|ACX89100.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium wasabiae WPP163]
Length = 903
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 705 PLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 764
Query: 74 IDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT--E 114
++ DG + +D+ + I+Q LE + +P LR + V +PT +
Sbjct: 765 LEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTD 822
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 RRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKPD 881
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 882 LRLKLQERL 890
>gi|336176218|ref|YP_004581593.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
gi|334857198|gb|AEH07672.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
Length = 765
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 83/223 (37%), Gaps = 43/223 (19%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA---AAVVHVT 163
+V +P + I DRPGL + VLA +V A N RA AAV +
Sbjct: 578 AVNPLPDDSMFEIVVVAPDRPGLLAATTGVLAVNRLDVHRASARGENGRALLQAAVA--S 635
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH----QIMFD 219
H G + ++ L VL G D A+ + RRL +I+FD
Sbjct: 636 THDGGPSA------GKLRGDLLRVLAGRVDL-DARIAGREQAYAAARRRLPPAPPKIIFD 688
Query: 220 DRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
D + TV+ +R+ DR +LF +V LTD V
Sbjct: 689 DSGSD---------------------------TVVEIRTPDRAGVLFRMVRALTDAGLGV 721
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+V T + FY+R DG + RE V + AA+
Sbjct: 722 RTAIVATIGLDVVNAFYVREADGSTVGRPGRREEVANRVLAAL 764
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 5 YAKLIRRM--NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
YA RR+ PP+++ D++ TV+++ + ++ G+L ++++ L D L ++ A +++
Sbjct: 671 YAAARRRLPPAPPKIIFDDSGSD--TVVEIRTPDRAGVLFRMVRALTDAGLGVRTAIVAT 728
Query: 63 DGGWFMDVFNVIDCDGKKI 81
G ++ F V + DG +
Sbjct: 729 IGLDVVNAFYVREADGSTV 747
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
++V DN+ + T++ + + ++ G+L +++ N L +++A IS+D +D F ++D
Sbjct: 776 KIVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 76 CDGKKIRDKEVIDYIQQRL----ETD 97
GKKI D+ V+D I+ L ETD
Sbjct: 836 KHGKKITDQRVLDNIRGELSKEIETD 861
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 114 EEHTSIEF--TGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYA 170
EE +IE DRP L S++C L+ N+ A+I+T ND + + + +G
Sbjct: 671 EELDTIELIVCAKDRPALLSDICGALSSFSYNIKWAKIYTMENDVTIDNIMIANPFSGRK 730
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK---AKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
+ + K+ S K ++ + G D R+ +++S+ P + ++ +I+FD+
Sbjct: 731 MPEDKQESLKKRIINTIKDGRDIKRQITQSESSIKGPAQVFIKK--DKIVFDN------- 781
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
++ +YT++ + +KDR LL+DI+ + + V ++T
Sbjct: 782 ------------------DVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTD 823
Query: 288 RTEAYQEFYIRHVDGLPISSE 308
FY+ G I+ +
Sbjct: 824 VDRVVDSFYLVDKHGKKITDQ 844
>gi|190149913|ref|YP_001968438.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263237|ref|ZP_07544857.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915044|gb|ACE61296.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306871454|gb|EFN03178.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 850
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N AT I + ++ + L++ Q+L+ + I A I +S G +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 IDCDGKKIRDKEVIDYIQQRLET------------------DASFAPSLRSSVGVMPTEE 115
+ +GK + + + I+Q LE SF + +
Sbjct: 719 TELNGKPLEEMRC-EQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ E DR GL + V +V L N+VNA+I T +R VT
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVT 825
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R I+ L VL
Sbjct: 902 NATRQGNIRRKLLGVL 917
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|50119969|ref|YP_049136.1| PII uridylyl-transferase [Pectobacterium atrosepticum SCRI1043]
gi|81170615|sp|Q6D8E5.1|GLND_ERWCT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|49610495|emb|CAG73940.1| [protein-PII] uridylyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 904
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
N P V+I + T I + S ++ + V L+ NL + A I +S G MD F
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 763
Query: 72 NVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT--E 114
V++ DG + E+I + ++ T + +P LR + V +PT +
Sbjct: 764 IVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHTD 823
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + +DL+ ++ A I T +R + + D S A+K
Sbjct: 824 RRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILAD-SDRRALKPE 882
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 883 LRLKLQERL 891
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P ++ IDN + T+++V + ++ GIL + + + +N+ I+ A IS+ G DVF++
Sbjct: 753 PTQISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHI 812
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G KI+DKE + + LE
Sbjct: 813 ESPEGGKIKDKEHANELVSALE 834
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N A T + + ++ + L+V+ + + L I A I +S G+ D F V +
Sbjct: 688 VKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTE 747
Query: 76 CDG-------KKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--HTSI 119
DG +++ +K +I+ + Q E ++++ V + TE+ HT +
Sbjct: 748 LDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTEM 807
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E D+ GL ++V V ++L+ ++ NA+I T ++A +T+ + G A+ + +R S
Sbjct: 808 ELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTN-AKGEALSERERQSL 866
Query: 180 IKEL 183
++L
Sbjct: 867 SEKL 870
>gi|253700950|ref|YP_003022139.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
gi|251775800|gb|ACT18381.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
Length = 894
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T+ + + G+ I + R + + L
Sbjct: 717 DVPGLFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDL 776
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 243
VL G P I++ E+ + V RVE +
Sbjct: 777 RQVLEGKVKVSALVAKRHRPSILS---------------EKAKPTVPARVEIDN------ 815
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGA 873
Query: 304 PISSEAERERVIQCLEAAIE 323
+ + + E + + L AA++
Sbjct: 874 KVMNPVKLEEIRKELLAAVD 893
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + ++ I++ L
Sbjct: 868 KDIFGAKVMNPVKLEEIRKEL 888
>gi|322831586|ref|YP_004211613.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|384256700|ref|YP_005400634.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
gi|321166787|gb|ADW72486.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|380752676|gb|AFE57067.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
Length = 896
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V L+ NL I A I ++ G MD F V
Sbjct: 702 PLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 761
Query: 74 IDCDGKKI-RDK-EVIDYIQQRLETDASFAP------------SLRSSVGVMPT--EEHT 117
++ DG + +D+ E I Y ++ T A P S+++ V +PT + T
Sbjct: 762 LEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLPTHTDRRT 821
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + V V +DL ++ A I T +R
Sbjct: 822 YMELVSLDQPGLLARVGEVFSDLGLSLHGARISTIGER 859
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 7 KLIRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
K RR P +V +DN T T+++V + ++ G+L + +VL + +++A I+++
Sbjct: 776 KTFRRSVPLPETKVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTE 835
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
G +D F + D D KK+ D + + I++R+
Sbjct: 836 GNRVIDSFYITDMDYKKVTDPQKLLRIKERI 866
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + GI +++ ++ V I A I ++ G+ +D F V D G+ + +
Sbjct: 729 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGRPFGEDD 788
Query: 86 VIDYIQQR----LETDASFAPSL------RSSVG---VMP--------TEEHTSIEFTGT 124
+ I++ L P L R G V P + T IE
Sbjct: 789 QLARIERSIADGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDASHRFTVIEVGAR 848
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + H + +A I + +RAA +VTD TG I DP RL ++ L
Sbjct: 849 DRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPGRLEALRAAL 907
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V DN+ TVI+V + ++ +L ++ + L + + +I+ A+I+ G D F V
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D ++ ++ L AS
Sbjct: 888 DLTGDKITDPGRLEALRAALSDAAS 912
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D +L ++ A++S+ G +D F V
Sbjct: 731 PPRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
DG + E ++ ET
Sbjct: 791 TGTDGAPLPGDEAASVARKLEET 813
>gi|114562446|ref|YP_749959.1| PII uridylyl-transferase [Shewanella frigidimarina NCIMB 400]
gi|114333739|gb|ABI71121.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
Length = 857
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ +T T + V S +K + V+ VL++ N+ + A I +S + +D F +
Sbjct: 663 PLVLMSKHTTRGGTELFVYSKDKPKLFATVMTVLDNKNINVHDANIMTSKDNYALDTFVI 722
Query: 74 IDCDGKKIRDKEVIDYIQQRLETD-ASFAPSL---------------RSSVGVMPTEEHT 117
++ DG+ I I I++ LE AS P L + V +P+ H
Sbjct: 723 LEQDGEPIIQLSRIQSIRKALEKALASENPKLPKFRKLARIMKPFNVATHVSFLPSARHG 782
Query: 118 S--IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +E D PGL ++V L + ++ A+I T +RA + + +G A+ +P+
Sbjct: 783 TSMMELITLDTPGLLAKVGDTLYRCNVTLLAAKITTIGERAEDFF-ILQNQSGTALDEPQ 841
Query: 176 R 176
+
Sbjct: 842 Q 842
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D +L ++ A++S+ G +D F V
Sbjct: 731 PPRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
DG + E ++ ET
Sbjct: 791 TGTDGAPLPGDEAASVARKLEET 813
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 878 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 936
Query: 173 DPKRLSTIKELLFNVL 188
+ R I+ L VL
Sbjct: 937 NATRQGNIRRKLLGVL 952
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 929 DLVGHKISNATRQGNIRRKL 948
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|153004974|ref|YP_001379299.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028547|gb|ABS26315.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 927
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
++ + T DRPGL + V VLA ++ +AE+++ D + D
Sbjct: 731 YSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFSTPDGS----------------DLG 774
Query: 176 RLSTIKELLFNVLRGYDD-------FRKAKTSLSPPGIMNRERRLHQIMFDD-RDYERVE 227
RL+ +F LRG D+ +R A+T L+ ++ E L ++ R E
Sbjct: 775 RLAGRALDVFE-LRGPDERAVEPARWRAARTDLA--RVLAGEEGLDALLARRLRASSLPE 831
Query: 228 KAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
K + RV K V + N + ++V+ + + DR LL + T ++ V + T
Sbjct: 832 KPLPRVPTK-----VVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELGLSVDLARIAT 886
Query: 287 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
A FY+R DG P+ E RV+ L AA+ R
Sbjct: 887 EGHRASDAFYVRTPDGAPLEGE-RAARVVAALTAAVSR 923
>gi|383188836|ref|YP_005198964.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371587094|gb|AEX50824.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 896
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V L+ NL I A I ++ G MD F V
Sbjct: 702 PLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 761
Query: 74 IDCDGKKI-RDK-EVIDYIQQRLETDASFAP------------SLRSSVGVMPT--EEHT 117
++ DG + +D+ E I Y ++ T A P S+++ V +PT + T
Sbjct: 762 LEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLPTHTDRRT 821
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + + V +DL ++ A I T +R
Sbjct: 822 YMELVALDQPGLLARIGEVFSDLGLSLHGARISTIGER 859
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSDWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASF-------APSLRSSVGVMPT----- 113
+ V+D DG I D K++ D + + L + P P
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 114 ---EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFNFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRASE 328
F+I D P+S +E ++Q L+A +ASE
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG---QASE 892
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPQ 872
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQLCLRLQ 878
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I P+S
Sbjct: 853 RVEDVFFITDAHNQPLS 869
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R + V IDN T TVI V + +K G+L ++ + L D+ L + A I + +DV
Sbjct: 814 RRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDV 873
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE 95
F V + +G+K+ + + IQ RL+
Sbjct: 874 FYVTERNGRKVEEARTCESIQARLQ 898
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E++ I F G+F ++ VLA V++A+I T D + S P
Sbjct: 717 EYSLIAFEAVA-SGMFMKMTGVLAARGLRVLDAQIVTRPDGIVVDTFLVKDSDFSCEPTP 775
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
RL + + +VLRG LS M + +R + F R R + +++
Sbjct: 776 ARLGKVGNAIVSVLRG---------ELSIEAFMEQNQR---VSFRSRMPIRRHRTEVKID 823
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
+++S +TVI + + D+ LL +I TL D+ V + T +
Sbjct: 824 NETS----------DHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDV 873
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIER 324
FY+ +G + E + L+ ++R
Sbjct: 874 FYVTERNGRKVEEARTCESIQARLQEQVDR 903
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSDWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + AT I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV-----------IDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG I R +E+ DY IQ+R+ +FAP + +
Sbjct: 749 YIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ P T +E DRPGL + + + D ++ NA+I T +R V VTD +
Sbjct: 809 DALRPV---TILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTD-AH 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ D +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----QRLETDASFAPS 103
++ A I++ G DVF V D + + D E+ +Q Q + D+ PS
Sbjct: 842 LQNAKIATLGERVEDVFFVTDAHNQPLSDPELCARLQLAIAEQLADGDSYIQPS 895
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T + A V + G+ I D R ++
Sbjct: 719 DVPGLFSMITGVMAANGMNILGAQILTSRNGKALDVLQVNSPQGFVITDESRWQRLE--- 775
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
DD R+ G + ++R I+ + K RVE +
Sbjct: 776 -------DDMRQVLQGKVRVGTLVKKRYRPTILTEKPK----PKFPTRVEIDN------- 817
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 302
+ DYTVI + + D+ LL+ I TLT++ + V+T + FY++ + G
Sbjct: 818 -EVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFG 874
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN AD TVI + + +K G+L ++ L ++ L I + +S+ DVF V
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + ++ I+ L
Sbjct: 870 KDIFGHKLLGGDKLEEIRIHL 890
>gi|302781406|ref|XP_002972477.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
gi|302805113|ref|XP_002984308.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300148157|gb|EFJ14818.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300159944|gb|EFJ26563.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
Length = 236
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E + DR G + L DL NVV + + + +T +TG ++DP+
Sbjct: 46 TIVELSYGDRLGALLDTMKALKDLGLNVVKGSVAVSGKTKSNRLSITRAATGRKVEDPEL 105
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +I+ + + L Y K ++ +A G+ K
Sbjct: 106 LESIRLTIISNLLQYHPESSEKLAMG-------------------------EAFGKKPPK 140
Query: 237 S--SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
+ +TV + +++T+ + D+P LL DIV +T V ++T A
Sbjct: 141 KIDVKTHITVTDQGPARSLLTIETADKPGLLLDIVEMITATSVTVESAEIDTEGLVARDR 200
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F++ + G +++ E ++ CL + R SE
Sbjct: 201 FHVSY--GGAALTKSLAEVLVNCLRFHLRRSESE 232
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIRD + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIRD + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S AP+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S AP+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|157376295|ref|YP_001474895.1| PII uridylyl-transferase [Shewanella sediminis HAW-EB3]
gi|157318669|gb|ABV37767.1| (Protein-PII) uridylyltransferase [Shewanella sediminis HAW-EB3]
Length = 859
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + + P V+I +T T + + +K + V+ VL++ N+ + +A I +S
Sbjct: 654 AILKHKQDEPLVLISKHTTRGGTELFIYGKDKPKLFTTVMAVLDNKNINVHEAGIMASKD 713
Query: 65 GWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSL------------RSSV 108
+ +D F +++ DG + R + + + + L +D S P R+ V
Sbjct: 714 QYVLDSFVILEQDGSPVSRVSRIQALRKTLIKALNSDTSKLPKFKKLSRKMKPFRVRTQV 773
Query: 109 GVMPTEEHTS--IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+P+ H + +E D PGL ++V +L ++ A+I T +RA
Sbjct: 774 NFLPSRRHGTSMMELIALDSPGLLAKVGDILYRCQLKLLAAKITTIGERA 823
>gi|302542214|ref|ZP_07294556.1| protein-P-II uridylyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459832|gb|EFL22925.1| protein-P-II uridylyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 448
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV I + ATVI+V + + G+L ++ + L L ++ A++
Sbjct: 351 YRKYPRRRGVHAPPPRVTIAPGSSQLATVIEVRAQDIPGLLHRIGRALEAAGLTVRSAHV 410
Query: 61 SSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL 94
S+ G +D F V D G + R EV ++Q L
Sbjct: 411 STLGANAVDAFYVTDPTGAPLAPMRAAEVAREVEQAL 447
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|238754810|ref|ZP_04616161.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706970|gb|EEP99336.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
Length = 892
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ VI + ++ T ++ +P LR + V +PT E
Sbjct: 757 LEPDGSPLAQDRHSVIRHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTEVNFLPTHTERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 SYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGER 855
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFNFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E ++Q L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 894
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-------------------EVIDYIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E IQ+R+ +FAP + ++
Sbjct: 749 YVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ + ++E
Sbjct: 866 QPLSDPELCARLQE 879
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF V D + + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQE 879
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L L+ D++ P I+ R R+L F
Sbjct: 762 NPARIKQIREGLIEALKNPDEY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F++ + P+S + L+ I RR SE
Sbjct: 853 RVEDVFFVTDANNQPLSD----PELCARLQETIVRRLSE 887
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQ 878
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 818 DLVGHKISNATRQGNIKRKL 837
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 767 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 825
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 826 NATRQGNIKRKLLALL 841
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 635 DLVGHKISNATRQGNIKRKL 654
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 584 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 642
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 643 NATRQGNIKRKLLALL 658
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N D TV++V +++ G+L + + + +NL I A+IS+ G +DVF V D
Sbjct: 843 VLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 902
Query: 77 DGKKIRDKEVIDYIQQRL 94
G+KI + + I++RL
Sbjct: 903 TGQKIANIGRQEIIRERL 920
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 850 SDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 908
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+E L + G
Sbjct: 909 NIGRQEIIRERLSAAVEG 926
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + N+V+A+I T D G+A
Sbjct: 743 TELTILAQDHPRLLSVIAGACYSTGANIVDAQIDTTTD-------------GFA------ 783
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV---GRV 233
L TI + L G DD R+ ++ ++ R R D++ E V K GR+
Sbjct: 784 LDTI--FIGRELPGDDDERRRGERIT--ALIERTLR-----GDEQIPEPVAKKGSVRGRM 834
Query: 234 EDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
+ +V + N + DYTV+ + DRP LL+D+ ++ + + ++T +
Sbjct: 835 KAFKVASEVLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVV 894
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
FY+ + G I++ +E + + L AA+E
Sbjct: 895 DVFYVTDLTGQKIANIGRQEIIRERLSAAVE 925
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 844 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 902
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 903 NATRQGNIKRKLLALL 918
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 895 DLVGHKISNATRQGNIKRKL 914
>gi|302554421|ref|ZP_07306763.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302472039|gb|EFL35132.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 833
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V S + G+L ++ + L D N+ ++ A++S+ G +D F V
Sbjct: 748 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYV 807
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G + E + + ++LE
Sbjct: 808 TGPEGAPLPGDEA-ESVARKLE 828
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 311
TVI +RS+D P LLF I L D V V+T A FY+ +G P+ + E
Sbjct: 762 TVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYVTGPEGAPLPGD-EA 820
Query: 312 ERVIQCLE 319
E V + LE
Sbjct: 821 ESVARKLE 828
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I RL+
Sbjct: 886 TDLFGQKVTNDNRQASIATRLKA 908
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|224117840|ref|XP_002317681.1| predicted protein [Populus trichocarpa]
gi|222860746|gb|EEE98293.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVID 75
++DN T++++ + G+L +++ L D N+ I + YI +D+F ++
Sbjct: 235 IMDNLLSPAHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLF-IMQ 293
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSE 132
DGKKI D + RLE + P + V P E +E +G RP +F +
Sbjct: 294 ADGKKIVDPNKQKALSSRLEMEL-VRPLRVAVVSRGPDTELMVANPVELSGKGRPLVFHD 352
Query: 133 VCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L L+ + +AEI DR V V D G A+ P+R I+E ++ +L
Sbjct: 353 ITLALTMLNSCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PRR--KIEEQVWKMLM 408
Query: 190 GYD 192
G++
Sbjct: 409 GWE 411
>gi|432552204|ref|ZP_19788938.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
gi|431087903|gb|ELD93824.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
Length = 890
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ PRV++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPRVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|242240399|ref|YP_002988580.1| PII uridylyl-transferase [Dickeya dadantii Ech703]
gi|242132456|gb|ACS86758.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech703]
Length = 890
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 693 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R + I+Q L P +R + V +PT
Sbjct: 753 FIVLEPDGNPLAPDRHDMIRHAIEQALTQRDYQHPRIRRPSPKLRHFSVPTEVSFLPTHT 812
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGER 854
>gi|212722976|ref|NP_001132108.1| uncharacterized protein LOC100193524 [Zea mays]
gi|413941849|gb|AFW74498.1| hypothetical protein ZEAMMB73_599986 [Zea mays]
Length = 215
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F +
Sbjct: 36 VTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLF-AV 94
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 95 QSDGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 153
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFN 186
++ L +L + AEI H DR V + +H A++ S I + + N
Sbjct: 154 DITLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTN 208
Query: 187 VLRGYD 192
+L G+D
Sbjct: 209 MLMGWD 214
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKIS 901
Query: 173 DPKRLSTIKELLFNVL 188
+ R IK L +L
Sbjct: 902 NATRQGNIKRKLLALL 917
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNDGESIGDNPTRIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I RL+
Sbjct: 886 TDLFGQKVTNDNRQASIATRLKA 908
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 145 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 204
Query: 71 FNVIDCDG----------KKIRDK---------EVIDYIQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ E IQ+R+ +FAP + S+
Sbjct: 205 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISN 264
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 265 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 320
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 321 NQPLSDPELCLRLQEAIVQQL 341
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 237 DEYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 296
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 297 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQE 335
>gi|89075422|ref|ZP_01161839.1| PII uridylyl-transferase [Photobacterium sp. SKA34]
gi|89048838|gb|EAR54408.1| PII uridylyl-transferase [Photobacterium sp. SKA34]
Length = 873
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V S +K + V+ L+ NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKIKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL-----ETDASFAP------SLRSSVGV 110
G+ +D F V+D +GK I R + + + L E AP ++++ V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTTIRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVSF 791
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +E D PGL ++V AV A+ + ++ A+I T +RA
Sbjct: 792 LPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERA 839
>gi|218698586|ref|YP_002406215.1| PII uridylyl-transferase [Escherichia coli IAI39]
gi|226723941|sp|B7NIC8.1|GLND_ECO7I RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218368572|emb|CAR16309.1| uridylyltransferase [Escherichia coli IAI39]
Length = 890
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIQFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 849 SDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 907
Query: 173 DPKRLSTIKELLFNVLRGY 191
+ R I+E L + + G+
Sbjct: 908 NIGRQEIIRERLADAVEGH 926
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N D TV+++ +++ G+L + + + +NL I A+IS+ G +DVF V D
Sbjct: 842 VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 901
Query: 77 DGKKIRDKEVIDYIQQRL 94
G+KI + + I++RL
Sbjct: 902 TGQKIANIGRQEIIRERL 919
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D KE+ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGGSIGDNPVRVKEIRDGLAEALRNPDDYPNIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S +++ + + L
Sbjct: 866 QPLSDPQLCSRLQDAIVDHL 885
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQ 878
>gi|366159388|ref|ZP_09459250.1| PII uridylyl-transferase [Escherichia sp. TW09308]
Length = 890
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHEVIRFGLEQILTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 3 DEYAKLI-RRMN--------PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D YA + RRM P +VVI N+ D T + + ++++ G+L + ++ +
Sbjct: 778 DRYASTVSRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEI 837
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97
+++ A I++ G DVF + D DG+ + D + +QQ L+ +
Sbjct: 838 LVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLKQE 881
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L+ R +P P V+I + A + I + + + + + ++ + L I A I+
Sbjct: 677 LLDREDPEDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNAIDSLGLTIMDARIIT 736
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV---------- 110
S G+ +D + V+D G I D I+ I++ L + S+V
Sbjct: 737 SVDGFSLDTYIVLDEQGTPIGEDWARIEQIRKTLTETLKYPDRYASTVSRRMPRRNKHFD 796
Query: 111 MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+PT+ + T+++ DRPGL + + + V NA I T +RA V
Sbjct: 797 VPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFF 856
Query: 162 VTDHSTGYAIKDPKRLSTIKELL 184
+TD G + DP +++ L
Sbjct: 857 ITDLD-GEPVSDPTLCQELQQTL 878
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 49/216 (22%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+IDN + AT+++++ +K G L + + ++ L I +A I+ + F V
Sbjct: 35 PKVIIDNLSDPLATILEIEFGDKLGELADTCEAIRNLGLDISRAEITESN---QNRFYVT 91
Query: 75 D--CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG-------------------VMPT 113
D K + D Q L T + P + V V PT
Sbjct: 92 DHQSSEKITASARLEDLRQTVLTTMCYYHPEAQEFVQQTARNSKPYEVADDAETEYVTPT 151
Query: 114 EEH-----TSIEFTG-------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
++ T I T TDRPGL SE+ VL DL+ NVV AEI T
Sbjct: 152 KKKRQIVPTRITVTSVSNGTKSKLLIETTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAA 211
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
A + T H G A+ D +++L+ N L+ Y
Sbjct: 212 AVDTMLCTYH--GKALND-----NMEQLVVNTLQYY 240
>gi|308270950|emb|CBX27560.1| hypothetical protein N47_H23820 [uncultured Desulfobacterium sp.]
Length = 407
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
D L RM+ ++ IDNN+ + T+I+V S + G+L ++ L L IK A I++
Sbjct: 310 DHKPPLTSRMH--KINIDNNSSSFFTIIEVFSYDFPGLLYKITNALFSCRLDIKLAKIAT 367
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+DVF V+D DG+K+ KE + I+
Sbjct: 368 KVDQVVDVFYVMDFDGQKVDSKERVSLIE 396
>gi|345430299|ref|YP_004823420.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
gi|301156363|emb|CBW15834.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
Length = 861
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 32/184 (17%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N + T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLETDA--------------SFAP-------SLRSSVGVMP-- 112
+G+ +R ++R E +A SFA ++++ V +
Sbjct: 735 LNGELVRS-------ERRRELEAVLTSVLLGEKLPSVSFANNRQLQHFTVKTDVRFLKET 787
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+
Sbjct: 788 KKEHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEK-GTALT 846
Query: 173 DPKR 176
+ +R
Sbjct: 847 EEER 850
>gi|224105273|ref|XP_002333837.1| predicted protein [Populus trichocarpa]
gi|222838705|gb|EEE77070.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVID 75
++DN T++++ + G+L +++ L D N+ I + YI +D+F ++
Sbjct: 234 IMDNLLSPAHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLF-IMQ 292
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSE 132
DGKKI D + RLE + P + V P E +E +G RP +F +
Sbjct: 293 ADGKKIVDPNKQKALSSRLEMEL-VRPLRVAVVSRGPDTELMVANPVELSGKGRPLVFHD 351
Query: 133 VCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L L+ + +AEI DR V V D G A+ P+R I+E ++ +L
Sbjct: 352 ITLALTMLNSCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PRR--KIEEQVWKMLM 407
Query: 190 GYD 192
G++
Sbjct: 408 GWE 410
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 117/296 (39%), Gaps = 54/296 (18%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D VI V+ +K G+ + +++ L I + +S+DG W VF+V+ GK
Sbjct: 18 GDPAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVV---GKSTTRW 74
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS---------IEFTGTDRPGLFSEVCA 135
+ +++RL PS S+ G+ ++ DR GL +V
Sbjct: 75 GL---LKKRL---VGACPSCSSASGISYYTAELQPPRPPDVFLLKLACHDRKGLLHDVTG 128
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLST---IKELLFNVLRGY 191
VL +L + ++ T D R + VTD S+ I + ++ T ++ ++ N +
Sbjct: 129 VLCELELTIKKVKVSTTPDGRVMDLFFVTDTSS--CIXNKRKEDTYDHLRAVMGNSMISC 186
Query: 192 D--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 243
D A++S P I E L M D+ +V + D P
Sbjct: 187 DIEMVGPEITACSAESSFLPTAIT--ENILPLQMPDELPSSLTSTSVSVIMDNLLSPA-- 242
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
+T++ + +D LL+DI+ TL D + +Y FYI+H
Sbjct: 243 -------HTLVQIVCQDHKGLLYDIMRTLKDYNIQI-----------SYGRFYIKH 280
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 48/188 (25%)
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--YAIKDPKRLST 179
TG DRPGLF+++ +L NVV A+++T A V + G + DP R+
Sbjct: 763 TGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKPFGHDDPGRIRQ 822
Query: 180 IKELLFNVLRG----------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
+++ L + G + R A +++P ++FDD
Sbjct: 823 MEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAP-----------TVVFDD--------- 862
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
S PQ+T++ + +DRP LL D+ L + ++
Sbjct: 863 -------ESNPQMTIIEVS---------GRDRPGLLADVASVLARARLDTASAHIDCYGE 906
Query: 290 EAYQEFYI 297
A FY+
Sbjct: 907 RAVDAFYV 914
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNVIDCDGKK 80
+T +A + ++ G+ + + ++ V+ +S +DVF V D GK
Sbjct: 752 DTTRNAACFCITGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKP 811
Query: 81 IR--DKEVIDYIQQRLET---DASFAPSLRSSV--------GVMPT--------EEHTSI 119
D I +++ LE + AP + ++ + PT + T I
Sbjct: 812 FGHDDPGRIRQMEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAPTVVFDDESNPQMTII 871
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E +G DRPGL ++V +VLA + +A I + +RA +V DH T + +R
Sbjct: 872 EVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVVDHFTRKQLTKAQR--- 928
Query: 180 IKELLFNVLRGYDDFRKAKTS-LSPPGIMNR 209
D +A T L PP NR
Sbjct: 929 ------------DKVHRALTEVLDPPSAPNR 947
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+T T++++ + ++ G+L +V Q+ D +L
Sbjct: 781 DDYLNIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D + + D + +QQ L
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDAHNQPLSDPQFCLRLQQAL 881
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ ++ IQ+R+ FA + ++
Sbjct: 749 YIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-AHNQP 867
Query: 171 IKDPKRLSTIKELLFNVLR 189
+ DP+ +++ L L+
Sbjct: 868 LSDPQFCLRLQQALVKELQ 886
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 3 DEYAKLI-RRMN--------PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D YA + RRM P +VVI N+ D T + + ++++ G+L + ++ +
Sbjct: 778 DRYATTVSRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEI 837
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97
+++ A I++ G DVF + D DG+ + D + +QQ L+ +
Sbjct: 838 LVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLKQE 881
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L+ R +P P V+I + A + I + + + + + L+ + L I A I+
Sbjct: 677 LLDREDPDDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNALDSLGLTIMDARIIT 736
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV---------- 110
S G+ +D + V+D G I D I+ I++ L + ++V
Sbjct: 737 SVDGFSLDTYIVLDEHGTPIGEDWARIEQIRKTLTETLKYPDRYATTVSRRMPRRNKHFD 796
Query: 111 MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+PT+ + T+++ DRPGL + + + V NA I T +RA V
Sbjct: 797 VPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFF 856
Query: 162 VTDHSTGYAIKDPKRLSTIKELL 184
+TD G + DP +++ L
Sbjct: 857 ITDLD-GEPVSDPTLCQELQQTL 878
>gi|22127015|ref|NP_670438.1| PII uridylyl-transferase [Yersinia pestis KIM10+]
gi|45442577|ref|NP_994116.1| PII uridylyl-transferase [Yersinia pestis biovar Microtus str.
91001]
gi|149366957|ref|ZP_01888990.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|167468856|ref|ZP_02333560.1| PII uridylyl-transferase [Yersinia pestis FV-1]
gi|170023313|ref|YP_001719818.1| PII uridylyl-transferase [Yersinia pseudotuberculosis YPIII]
gi|218928210|ref|YP_002346085.1| PII uridylyl-transferase [Yersinia pestis CO92]
gi|21960062|gb|AAM86689.1|AE013914_9 protein PII [Yersinia pestis KIM10+]
gi|45437442|gb|AAS62993.1| [protein-PII] uridylyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|115346821|emb|CAL19707.1| [protein-PII] uridylyltransferase [Yersinia pestis CO92]
gi|149290571|gb|EDM40647.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|169749847|gb|ACA67365.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
YPIII]
Length = 912
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 875
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L + LR DD+ P I++R R+L F
Sbjct: 762 NPQRVKQIRDGLSDALRNPDDY---------PSIIHRRVPRQLKHFAFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL I D + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLETDASFAPSL--------------RSSVGVM 111
+ V+D DG I R K++ D + L + PS+ V ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLSDALRNPDDY-PSIIHRRVPRQLKHFAFPPQVTIL 807
Query: 112 PTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ T +E DRPGL + + + D ++ NA+I T +R V +TD +
Sbjct: 808 NDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITD-ADNQ 866
Query: 170 AIKDPKRLSTIKELLFNVLR-----GYDDFR 195
+ DP+ S +++ + LR G + FR
Sbjct: 867 PLSDPQLCSRLQDAIVEQLRVDQASGTESFR 897
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ D +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVI----DYIQQRLETD-ASFAPSLRSSV 108
D D + + D ++ D I ++L D AS S R ++
Sbjct: 861 TDADNQPLSDPQLCSRLQDAIVEQLRVDQASGTESFRLTI 900
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E ++Q L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 894
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V S + G+L ++ + L D +++++ A++S+ G +D F V
Sbjct: 730 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYV 789
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G + E + + ++LE
Sbjct: 790 TGPEGAPLPGDEA-ESVARKLE 810
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 311
TVI +RS+D P LLF I L D +V V+T A FY+ +G P+ + E
Sbjct: 744 TVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVTGPEGAPLPGD-EA 802
Query: 312 ERVIQCLE 319
E V + LE
Sbjct: 803 ESVARKLE 810
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ Q L L ++ A++S+ G +D F V
Sbjct: 764 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 823
Query: 74 IDCDGKKIRDKEV 86
D G+ + ++E
Sbjct: 824 TDAGGRPLGEEEA 836
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 864
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 865 LSDPQLCSRLQEAIVQQLQA 884
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 699 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 758
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 759 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 798
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 799 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 849
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E ++Q L+A AS
Sbjct: 850 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 891
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 858 TDADNQPLSDPQLCSRLQE 876
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + + L
Sbjct: 866 HQLSDPLLCSRLQDAIVDQL 885
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+K A I++ G DVF + D + ++ D + +Q
Sbjct: 841 SLKNAKIATLGERVEDVFFITDANNHQLSDPLLCSRLQ 878
>gi|449484539|ref|XP_004156910.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase 1-like
[Cucumis sativus]
Length = 954
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + +DN+ D+T + + N+ G+L + +V + L I KA + +G +F F V
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ID I++ L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|317046980|ref|YP_004114628.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
gi|316948597|gb|ADU68072.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
Length = 884
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + R +I ++Q + T + P S+ + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPMIIQALEQAI-TQTQWVPPRARRQSSRLKHFSVETEVNFLPTH 804
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 805 TDRRSYLELIALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|152978704|ref|YP_001344333.1| PII uridylyl-transferase [Actinobacillus succinogenes 130Z]
gi|150840427|gb|ABR74398.1| metal dependent phosphohydrolase [Actinobacillus succinogenes 130Z]
Length = 858
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVID 75
V I N T + + ++ + +V+ + L I A IS+ G+ +D F V +
Sbjct: 667 VKISNRFSQGGTEVFLYCRDQAQLFHKVVTTIGAKKLSIHSAQISTSLDGYVLDTFVVTE 726
Query: 76 CDG---KKIRDKEVIDYIQQRLETDASFAPS-----------LRSSVGVMPTEE--HTSI 119
+G K R +E+ I + L + + +++ V + TE+ HT +
Sbjct: 727 LNGALLKSDRRRELERAITEALTYAENLKRATLHNHKLQPFHVKTEVRFLNTEKETHTEM 786
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
E D+ GL +EV + DL+ N++NA+I T ++A +T+
Sbjct: 787 ELVALDKAGLLAEVSQIFGDLNLNLLNAKITTTGEKAEDFFRLTN 831
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-M 68
N P V+I T + T I + + ++H + ++ +NL I A I + F +
Sbjct: 687 NGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTL 746
Query: 69 DVFNVIDCDGKKIRD-KEVIDYIQQRLETDA--------------------SFAPSLRSS 107
D + V+D DG I D +E I+ I+Q L DA FA + +
Sbjct: 747 DTYIVLDADGTPIGDNRERIEEIRQGL-IDAVRNPDEYLTIIQRHVPRQLKHFAFPPQVT 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T IE DRPGL + V + +V NA+I T +R V VT+ +
Sbjct: 806 IHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTN-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPQ 872
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R PP+V I N+T T+I++ + ++ G+L +V Q+ +L
Sbjct: 781 DEYLTIIQRHVPRQLKHFAFPPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEV 86
++ A I++ G DVF V + D + + D ++
Sbjct: 841 SVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 873
>gi|449457765|ref|XP_004146618.1| PREDICTED: glycogen phosphorylase 1-like [Cucumis sativus]
Length = 954
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + +DN+ D+T + + N+ G+L + +V + L I KA + +G +F F V
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ID I++ L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN+ DATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DCDGKKIRD 83
+G K+ D
Sbjct: 894 TTEGGKVTD 902
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V++ T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG ++IR+ K DY IQ+R+ +FAP + ++
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD G
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKG 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ + ++E
Sbjct: 866 QPLSDPELCARLQE 879
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ---RLETDASFAPS 103
++ A I++ G DVF + D G+ + D E+ +Q+ R ++ S P+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPELCARLQETIVRRLSEPSIQPA 893
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P R+ I+E L L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIQQIREGLIEALKNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F+I G P+S + L+ I RR SE
Sbjct: 853 RVEDVFFITDDKGQPLSD----PELCARLQETIVRRLSE 887
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSHEPPTALTR 897
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSRLQ 878
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLL 265
PQVT+ N ++ TV+ + + DRP LL
Sbjct: 802 ---------PQVTIHNDAQRPVTVLELSAPDRPGLL 828
>gi|186896425|ref|YP_001873537.1| PII uridylyl-transferase [Yersinia pseudotuberculosis PB1/+]
gi|186699451|gb|ACC90080.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
PB1/+]
Length = 912
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 875
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 120 EFT--GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
EFT D PGLFS + V+A N++ A+I T + + + G I D
Sbjct: 719 EFTICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCW 778
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+++ VL G D ++++ +R Q+M R R R++ +
Sbjct: 779 KKVRDDTERVLLGEADV---------AAMVDKRQRPSQLMV--RPAPRFPT---RIDFDN 824
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ + YTVI + + D+ LL+ I TLT + + ++T + FY+
Sbjct: 825 --------QVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYV 876
Query: 298 RHVDGLPISSEAERERVIQCLEAAIE 323
R + G I EA+ E V + L++AI+
Sbjct: 877 RDIFGHKIMDEAKLESVRERLKSAID 902
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R+ DN TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 817 PTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYV 876
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G KI D+ ++ +++RL++
Sbjct: 877 RDIFGHKIMDEAKLESVRERLKS 899
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ Q L L ++ A++S+ G +D F V
Sbjct: 765 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 824
Query: 74 IDCDGKKIRDKEV 86
D G+ + ++E
Sbjct: 825 TDAGGRPLGEEEA 837
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDG------- 78
T I + + ++H + ++ +NL I A I+S + +D + V+D DG
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 79 ---KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSVGVMPTEEHTSIEFTG 123
++IR+ K DY IQ+R+ +FAP + ++ T +E T
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV--TIHNDAQRPVTILELTA 821
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRPGL + + + + ++ NA+I T +R V +TD G + DP+ + ++E
Sbjct: 822 PDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPEFCARLQE 879
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D G+ + D E +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPEFCARLQE 879
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P R+ I+E L L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIQQIREGLIEALKNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I G P+S
Sbjct: 853 RVEDVFFITDDKGQPLS 869
>gi|432375091|ref|ZP_19618114.1| [protein-PII] uridylyltransferase [Escherichia coli KTE11]
gi|430892349|gb|ELC14841.1| [protein-PII] uridylyltransferase [Escherichia coli KTE11]
Length = 890
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|168057125|ref|XP_001780567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668045|gb|EDQ54661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 141/339 (41%), Gaps = 50/339 (14%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW-FMDVFNVID 75
VV D + + ++ +K G+ + +V+ + L + K IS+DG W F+ ++ +
Sbjct: 10 VVRKGKNLGDPSEVTINCPDKVGLGCDLARVVFEFGLSVTKGDISTDGRWCFVALWVIPR 69
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE--------FTGTDRP 127
+ +R ++QRLE PS S ++PT +E +DR
Sbjct: 70 SNPSVVR----WSLLKQRLE---DVCPSALGS--MLPTVAPPRLESKKILLLQVRSSDRT 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDP--KRLSTIKELL 184
GL +V L ++ + ++ T D RA + VTD+ KDP KR + + L
Sbjct: 121 GLLHDVAQKLWEMELTIHKIKVSTSPDGRAIDLFFVTDNRN----KDPWKKRAEEVTKEL 176
Query: 185 FNVLRGYDDFRKAKTSLSPP---GIMNRE---RRLHQIMFDD-----RDYERVEKAVGRV 233
L + + SL+ P G+ I +DD +DY EK
Sbjct: 177 KEFLG--EPCSHCEISLAGPECGGLTCSPLPASLTKDIFYDDPANFEKDYITSEKDHTNS 234
Query: 234 EDKSSRPQV---TVLNIEKD----YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG---M 283
E R + V +E + ++++ + K R LL+D + T+ D V HG M
Sbjct: 235 EKDHIRSECHDNNVFIVENNTSPIHSLLQLNCKSRKGLLYDCLRTVKDFNLQVAHGRIAM 294
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ G +E Y+ +G I+ E++ ++Q LE +
Sbjct: 295 MENGNSEI--NVYVLGPNGQRITDLQEQKVLVQSLEEEV 331
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS--SDGGWFMDVFNVID 75
+++NNT ++++++ ++ G+L ++ + D NL + I+ +G ++V+ V+
Sbjct: 250 IVENNTSPIHSLLQLNCKSRKGLLYDCLRTVKDFNLQVAHGRIAMMENGNSEINVY-VLG 308
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-PTEE---HTSIEFTGTDRPGLFS 131
+G++I D + + Q LE + +R VG P E TSIE G RP +
Sbjct: 309 PNGQRITDLQEQKVLVQSLEEEVGHP--VRIKVGTRGPDTELLVATSIEKCGRGRPRVLY 366
Query: 132 EVCAVLADLHCNVVNAEIWTH 152
+V L L + A+I H
Sbjct: 367 DVTLALKMLDICIFKADIGRH 387
>gi|420378472|ref|ZP_14877976.1| protein-P-II uridylyltransferase [Shigella dysenteriae 225-75]
gi|391307413|gb|EIQ65146.1| protein-P-II uridylyltransferase [Shigella dysenteriae 225-75]
Length = 831
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 633 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 692
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 693 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 752
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 753 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 794
>gi|255585359|ref|XP_002533376.1| amino acid binding protein, putative [Ricinus communis]
gi|223526783|gb|EEF29007.1| amino acid binding protein, putative [Ricinus communis]
Length = 413
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T+++ + G++ +++ L D N+ I + Y + G +D+
Sbjct: 232 NPVSVSMDNTLSRSHTLLQFLCKDHKGLMYDIMRTLKDYNIQISYGRFYATPKGHCEVDL 291
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D D + RL + P + V P E +E + RP
Sbjct: 292 F-IMQADGKKIIDSYKQDALCSRLRMEL-LRPLRVAVVSRGPDTELLVANPVELSERGRP 349
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELL 184
+F ++ L L+ + + EI H +DR V + D G+ + K I+E +
Sbjct: 350 LVFYDITLALKILNTRIFSVEIGRHMIHDREWEVYRILLDEGDGFTVPRNK----IEESV 405
Query: 185 FNVLRGYD 192
L G+D
Sbjct: 406 RKRLMGWD 413
>gi|420852309|ref|ZP_15316947.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
gi|391732820|gb|EIT61338.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
Length = 891
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|291280989|ref|YP_003497807.1| [protein-PII] uridylyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|290760862|gb|ADD54823.1| [Protein-PII] uridylyltransferase [Escherichia coli O55:H7 str.
CB9615]
Length = 831
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 633 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 692
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 693 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 752
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 753 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 794
>gi|108806513|ref|YP_650429.1| PII uridylyl-transferase [Yersinia pestis Antiqua]
gi|108813119|ref|YP_648886.1| PII uridylyl-transferase [Yersinia pestis Nepal516]
gi|145598953|ref|YP_001163029.1| PII uridylyl-transferase [Yersinia pestis Pestoides F]
gi|153946912|ref|YP_001399995.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 31758]
gi|162421348|ref|YP_001607773.1| PII uridylyl-transferase [Yersinia pestis Angola]
gi|165927056|ref|ZP_02222888.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939842|ref|ZP_02228382.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011922|ref|ZP_02232820.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211324|ref|ZP_02237359.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399773|ref|ZP_02305291.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419478|ref|ZP_02311231.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425260|ref|ZP_02317013.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229837749|ref|ZP_04457909.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|229840971|ref|ZP_04461130.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229843072|ref|ZP_04463222.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903561|ref|ZP_04518674.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|270487342|ref|ZP_06204416.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294503059|ref|YP_003567121.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|384121499|ref|YP_005504119.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|384125673|ref|YP_005508287.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|384141091|ref|YP_005523793.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|384413672|ref|YP_005623034.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420545665|ref|ZP_15043744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|420550968|ref|ZP_15048489.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|420556475|ref|ZP_15053365.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|420562065|ref|ZP_15058261.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|420567089|ref|ZP_15062800.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|420572758|ref|ZP_15067950.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|420578086|ref|ZP_15072772.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|420583421|ref|ZP_15077624.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|420588573|ref|ZP_15082266.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|420593889|ref|ZP_15087058.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|420599592|ref|ZP_15092159.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|420605051|ref|ZP_15097038.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|420610412|ref|ZP_15101885.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|420615712|ref|ZP_15106577.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|420621124|ref|ZP_15111351.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|420626166|ref|ZP_15115918.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|420636457|ref|ZP_15125179.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|420642053|ref|ZP_15130233.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|420647183|ref|ZP_15134929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|420652835|ref|ZP_15140002.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|420658345|ref|ZP_15144958.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|420663678|ref|ZP_15149726.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|420668650|ref|ZP_15154232.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|420673944|ref|ZP_15159049.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|420679489|ref|ZP_15164079.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|420684734|ref|ZP_15168782.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|420689909|ref|ZP_15173366.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|420695728|ref|ZP_15178458.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|420701095|ref|ZP_15183052.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|420707106|ref|ZP_15187933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|420712418|ref|ZP_15192723.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|420717821|ref|ZP_15197459.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|420723425|ref|ZP_15202276.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|420729057|ref|ZP_15207305.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|420734102|ref|ZP_15211856.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|420739572|ref|ZP_15216786.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|420744908|ref|ZP_15221485.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|420750699|ref|ZP_15226436.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|420755963|ref|ZP_15231009.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|420761839|ref|ZP_15235802.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|420767061|ref|ZP_15240513.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|420772050|ref|ZP_15244994.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|420777488|ref|ZP_15249858.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|420782988|ref|ZP_15254671.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|420788341|ref|ZP_15259387.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|420793815|ref|ZP_15264328.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|420798934|ref|ZP_15268933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|420804282|ref|ZP_15273744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|420809549|ref|ZP_15278518.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|420815238|ref|ZP_15283613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|420820411|ref|ZP_15288296.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|420825508|ref|ZP_15292851.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|420831275|ref|ZP_15298064.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|420836129|ref|ZP_15302443.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|420841271|ref|ZP_15307101.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|420846889|ref|ZP_15312173.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|420857822|ref|ZP_15321636.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|421762492|ref|ZP_16199289.1| PII uridylyl-transferase [Yersinia pestis INS]
gi|21362571|sp|Q8ZH68.2|GLND_YERPE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122980003|sp|Q1CFE4.1|GLND_YERPN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|123072950|sp|Q1CAN8.1|GLND_YERPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166232257|sp|A4TL94.1|GLND_YERPP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990448|sp|A7FFG7.1|GLND_YERP3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238687289|sp|A9R397.1|GLND_YERPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|108776767|gb|ABG19286.1| (protein-PII) uridylyltransferase [Yersinia pestis Nepal516]
gi|108778426|gb|ABG12484.1| (protein-PII) uridylyltransferase [Yersinia pestis Antiqua]
gi|145210649|gb|ABP40056.1| (protein-PII) uridylyltransferase [Yersinia pestis Pestoides F]
gi|152958407|gb|ABS45868.1| protein-P-II uridylyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162354163|gb|ABX88111.1| protein-P-II uridylyltransferase [Yersinia pestis Angola]
gi|165912245|gb|EDR30882.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920952|gb|EDR38176.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989188|gb|EDR41489.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207095|gb|EDR51575.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962219|gb|EDR58240.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050481|gb|EDR61889.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055660|gb|EDR65444.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679331|gb|EEO75434.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|229689948|gb|EEO82007.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697337|gb|EEO87384.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704126|gb|EEO91138.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|262361095|gb|ACY57816.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|262365337|gb|ACY61894.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|270335846|gb|EFA46623.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294353518|gb|ADE63859.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|320014176|gb|ADV97747.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342856220|gb|AEL74773.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|391429975|gb|EIQ91756.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|391431125|gb|EIQ92735.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|391433526|gb|EIQ94853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|391446182|gb|EIR06245.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|391446790|gb|EIR06785.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|391450718|gb|EIR10319.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|391462288|gb|EIR20815.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|391463605|gb|EIR21997.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|391465595|gb|EIR23774.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|391479011|gb|EIR35853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|391480139|gb|EIR36844.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|391480383|gb|EIR37060.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|391494241|gb|EIR49495.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|391495407|gb|EIR50510.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|391498131|gb|EIR52924.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|391510216|gb|EIR63773.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|391515089|gb|EIR68138.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|391525731|gb|EIR77846.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|391528582|gb|EIR80384.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|391529444|gb|EIR81128.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|391542257|gb|EIR92732.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|391544003|gb|EIR94268.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|391544974|gb|EIR95120.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|391559083|gb|EIS07898.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|391559648|gb|EIS08382.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|391561235|gb|EIS09787.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|391574272|gb|EIS21199.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|391574858|gb|EIS21685.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|391586651|gb|EIS31929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|391587211|gb|EIS32406.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|391590188|gb|EIS34972.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|391603614|gb|EIS46779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|391603932|gb|EIS47047.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|391605164|gb|EIS48082.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|391617994|gb|EIS59482.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|391618549|gb|EIS59951.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|391625563|gb|EIS66037.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|391629625|gb|EIS69527.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|391641029|gb|EIS79505.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|391643627|gb|EIS81779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|391643718|gb|EIS81855.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|391653265|gb|EIS90247.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|391659125|gb|EIS95461.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|391664031|gb|EIS99803.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|391666070|gb|EIT01582.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|391672015|gb|EIT06896.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|391684241|gb|EIT17939.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|391685591|gb|EIT19109.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|391686547|gb|EIT19957.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|391698275|gb|EIT30597.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|391701914|gb|EIT33863.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|391702855|gb|EIT34691.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|391712365|gb|EIT43251.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|391718715|gb|EIT48932.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|391719043|gb|EIT49220.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|391729901|gb|EIT58834.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|391736472|gb|EIT64490.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|411176698|gb|EKS46713.1| PII uridylyl-transferase [Yersinia pestis INS]
Length = 893
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|54310086|ref|YP_131106.1| PII uridylyl-transferase [Photobacterium profundum SS9]
gi|81170624|sp|Q6LN22.1|GLND_PHOPR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|46914525|emb|CAG21304.1| putative protein-P-II uridylyltransferase [Photobacterium profundum
SS9]
Length = 874
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V + +K + V+ L+ NL + A I +S
Sbjct: 673 ALLTHDHDKPLILLSKKATRGGTEVFVYNKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 732
Query: 65 GWFMDVFNVIDCDGKKI--------RDKEVIDYIQQRLETDASFAP------SLRSSVGV 110
G+ +D F V+D GK I R V + + E AP ++++ V
Sbjct: 733 GYTLDTFMVLDPSGKTIPENRHNTIRRALVNALTKMKSERKNKRAPRKLMHFNVKTQVDF 792
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T++E D PGL + + AV A ++ A+I T +RA
Sbjct: 793 LPTKTGKKTTMELIALDTPGLLARIGAVFAKQKVSLQAAKITTIGERA 840
>gi|420369740|ref|ZP_14870415.1| HD domain protein, partial [Shigella flexneri 1235-66]
gi|391320953|gb|EIQ77726.1| HD domain protein, partial [Shigella flexneri 1235-66]
Length = 549
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 351 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 410
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 411 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 470
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 471 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 512
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDKEVI----------------DY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G+ I D V DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPVRVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPVRVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|422333327|ref|ZP_16414338.1| [protein-PII] uridylyltransferase [Escherichia coli 4_1_47FAA]
gi|373245842|gb|EHP65307.1| [protein-PII] uridylyltransferase [Escherichia coli 4_1_47FAA]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 864
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 865 LSDPQLCSRLQEAIVQQLQA 884
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 699 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 758
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 759 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 798
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 799 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 849
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 850 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 885
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 858 TDADNQPLSDPQLCSRLQE 876
>gi|418039549|ref|ZP_12677811.1| protein-P-II uridylyltransferase [Escherichia coli W26]
gi|383477532|gb|EID69449.1| protein-P-II uridylyltransferase [Escherichia coli W26]
Length = 802
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 604 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 663
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 664 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 723
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 724 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 765
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D +++ D + + L ++ ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVRQIRDGLSEALRNPENYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|260866316|ref|YP_003232718.1| uridylyltransferase [Escherichia coli O111:H- str. 11128]
gi|415823979|ref|ZP_11512354.1| protein-P-II uridylyltransferase [Escherichia coli OK1180]
gi|417190934|ref|ZP_12013530.1| protein-P-II uridylyltransferase [Escherichia coli 4.0522]
gi|417216630|ref|ZP_12023302.1| protein-P-II uridylyltransferase [Escherichia coli JB1-95]
gi|417589786|ref|ZP_12240507.1| protein-P-II uridylyltransferase [Escherichia coli 2534-86]
gi|419195124|ref|ZP_13738539.1| protein-P-II uridylyltransferase [Escherichia coli DEC8A]
gi|419201288|ref|ZP_13744520.1| protein-P-II uridylyltransferase [Escherichia coli DEC8B]
gi|419219379|ref|ZP_13762340.1| protein-P-II uridylyltransferase [Escherichia coli DEC8E]
gi|419891816|ref|ZP_14411857.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9570]
gi|419893446|ref|ZP_14413430.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9574]
gi|420087276|ref|ZP_14599247.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9602]
gi|420092445|ref|ZP_14604147.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9634]
gi|424774770|ref|ZP_18201780.1| PII uridylyl-transferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257762672|dbj|BAI34167.1| uridylyltransferase [Escherichia coli O111:H- str. 11128]
gi|323176480|gb|EFZ62072.1| protein-P-II uridylyltransferase [Escherichia coli OK1180]
gi|345346144|gb|EGW78480.1| protein-P-II uridylyltransferase [Escherichia coli 2534-86]
gi|378054638|gb|EHW16916.1| protein-P-II uridylyltransferase [Escherichia coli DEC8A]
gi|378058195|gb|EHW20415.1| protein-P-II uridylyltransferase [Escherichia coli DEC8B]
gi|378073885|gb|EHW35930.1| protein-P-II uridylyltransferase [Escherichia coli DEC8E]
gi|386191906|gb|EIH80647.1| protein-P-II uridylyltransferase [Escherichia coli 4.0522]
gi|386193492|gb|EIH87776.1| protein-P-II uridylyltransferase [Escherichia coli JB1-95]
gi|388348835|gb|EIL14403.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9570]
gi|388367380|gb|EIL31064.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9574]
gi|394393526|gb|EJE70211.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9602]
gi|394400463|gb|EJE76377.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9634]
gi|421933626|gb|EKT91413.1| PII uridylyl-transferase [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432452920|ref|ZP_19695167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|433031572|ref|ZP_20219397.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
gi|430975514|gb|ELC92409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|431561507|gb|ELI34876.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432390060|ref|ZP_19632926.1| [protein-PII] uridylyltransferase [Escherichia coli KTE21]
gi|432717179|ref|ZP_19952183.1| [protein-PII] uridylyltransferase [Escherichia coli KTE9]
gi|432791392|ref|ZP_20025489.1| [protein-PII] uridylyltransferase [Escherichia coli KTE78]
gi|432797362|ref|ZP_20031391.1| [protein-PII] uridylyltransferase [Escherichia coli KTE79]
gi|432818386|ref|ZP_20052113.1| [protein-PII] uridylyltransferase [Escherichia coli KTE115]
gi|430923673|gb|ELC44408.1| [protein-PII] uridylyltransferase [Escherichia coli KTE21]
gi|431267300|gb|ELF58818.1| [protein-PII] uridylyltransferase [Escherichia coli KTE9]
gi|431343060|gb|ELG30030.1| [protein-PII] uridylyltransferase [Escherichia coli KTE78]
gi|431346576|gb|ELG33481.1| [protein-PII] uridylyltransferase [Escherichia coli KTE79]
gi|431359375|gb|ELG46020.1| [protein-PII] uridylyltransferase [Escherichia coli KTE115]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|51597320|ref|YP_071511.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 32953]
gi|81638764|sp|Q667I7.1|GLND_YERPS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|51590602|emb|CAH22243.1| [protein-PII] uridylyltransferase [Yersinia pseudotuberculosis IP
32953]
Length = 893
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|417229422|ref|ZP_12031008.1| protein-P-II uridylyltransferase [Escherichia coli 5.0959]
gi|386205912|gb|EII10418.1| protein-P-II uridylyltransferase [Escherichia coli 5.0959]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417126665|ref|ZP_11974219.1| protein-P-II uridylyltransferase [Escherichia coli 97.0246]
gi|386144915|gb|EIG91379.1| protein-P-II uridylyltransferase [Escherichia coli 97.0246]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|331645309|ref|ZP_08346420.1| protein-P-II uridylyltransferase [Escherichia coli M605]
gi|417660799|ref|ZP_12310380.1| [Protein-P2] uridylyltransferase [Escherichia coli AA86]
gi|330910017|gb|EGH38527.1| [Protein-P2] uridylyltransferase [Escherichia coli AA86]
gi|331046066|gb|EGI18185.1| protein-P-II uridylyltransferase [Escherichia coli M605]
Length = 890
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|450185103|ref|ZP_21888950.1| PII uridylyl-transferase [Escherichia coli SEPT362]
gi|449325373|gb|EMD15280.1| PII uridylyl-transferase [Escherichia coli SEPT362]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432677762|ref|ZP_19913192.1| [protein-PII] uridylyltransferase [Escherichia coli KTE142]
gi|431207944|gb|ELF06174.1| [protein-PII] uridylyltransferase [Escherichia coli KTE142]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422834457|ref|ZP_16882519.1| uridylyltransferase [Escherichia coli E101]
gi|371601977|gb|EHN90696.1| uridylyltransferase [Escherichia coli E101]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422971431|ref|ZP_16974706.1| [protein-PII] uridylyltransferase [Escherichia coli TA124]
gi|371598780|gb|EHN87575.1| [protein-PII] uridylyltransferase [Escherichia coli TA124]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|157157798|ref|YP_001461336.1| PII uridylyl-transferase [Escherichia coli E24377A]
gi|166990442|sp|A7ZHQ7.1|GLND_ECO24 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|157079828|gb|ABV19536.1| protein-P-II uridylyltransferase [Escherichia coli E24377A]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFM 68
N P V+I + AT I + + ++H + ++ +NL I A I+S + +
Sbjct: 687 NDPLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 69 DVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDAS-FAPSLRSSV 108
D + V+D DG +I D K DY IQ+R+ FA + ++
Sbjct: 747 DTYIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 SNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPK 175
+ DP+
Sbjct: 866 QPLSDPE 872
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPAIIQRRVPRQLKHFAFPPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF V D + + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCRRLQ 878
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + ++ + G I D
Sbjct: 702 EGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYIVLDADGGRIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L + L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIREIREGLIDALKNPDDY---------PAIIQRRVPRQLKHFAFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F++ + P+S
Sbjct: 853 RVEDVFFVTDANNQPLS 869
>gi|432763449|ref|ZP_19997906.1| [protein-PII] uridylyltransferase [Escherichia coli KTE48]
gi|431314524|gb|ELG02476.1| [protein-PII] uridylyltransferase [Escherichia coli KTE48]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|148982220|ref|ZP_01816649.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
gi|145960611|gb|EDK25963.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
Length = 873
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + +S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRS 106
G +D F V+D GK I R K V ++ L A P+ +++
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLTHVL---ADGRPTKIKTRRTPRNLQHFKVKT 786
Query: 107 SVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
V +PT+ + T +E D PGL ++V A A+L N+ A+I T +RA + +T
Sbjct: 787 LVEFLPTKSKKRTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTS 846
Query: 165 HSTG 168
+ G
Sbjct: 847 DTGG 850
>gi|432944731|ref|ZP_20141141.1| [protein-PII] uridylyltransferase [Escherichia coli KTE196]
gi|433041661|ref|ZP_20229200.1| [protein-PII] uridylyltransferase [Escherichia coli KTE117]
gi|431464662|gb|ELH44781.1| [protein-PII] uridylyltransferase [Escherichia coli KTE196]
gi|431561306|gb|ELI34690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE117]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432600676|ref|ZP_19836932.1| [protein-PII] uridylyltransferase [Escherichia coli KTE66]
gi|431144715|gb|ELE46409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE66]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|74310787|ref|YP_309206.1| PII uridylyl-transferase [Shigella sonnei Ss046]
gi|383176774|ref|YP_005454779.1| PII uridylyl-transferase [Shigella sonnei 53G]
gi|414574356|ref|ZP_11431571.1| protein-P-II uridylyltransferase [Shigella sonnei 3233-85]
gi|415849980|ref|ZP_11527012.1| protein-P-II uridylyltransferase [Shigella sonnei 53G]
gi|418261635|ref|ZP_12883590.1| protein-P-II uridylyltransferase [Shigella sonnei str. Moseley]
gi|420356739|ref|ZP_14857764.1| protein-P-II uridylyltransferase [Shigella sonnei 3226-85]
gi|420361706|ref|ZP_14862638.1| protein-P-II uridylyltransferase [Shigella sonnei 4822-66]
gi|91206757|sp|Q3Z5J1.1|GLND_SHISS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|73854264|gb|AAZ86971.1| protein PII [Shigella sonnei Ss046]
gi|323165867|gb|EFZ51649.1| protein-P-II uridylyltransferase [Shigella sonnei 53G]
gi|391290049|gb|EIQ48525.1| protein-P-II uridylyltransferase [Shigella sonnei 3226-85]
gi|391290241|gb|EIQ48716.1| protein-P-II uridylyltransferase [Shigella sonnei 3233-85]
gi|391297289|gb|EIQ55343.1| protein-P-II uridylyltransferase [Shigella sonnei 4822-66]
gi|397903467|gb|EJL19764.1| protein-P-II uridylyltransferase [Shigella sonnei str. Moseley]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|420631353|ref|ZP_15120613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
gi|391510963|gb|EIR64418.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
Length = 893
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFAP--------------SLRSSVGVMPT--EE 115
++ DG + +D+ +I + Q+ + + P S+ + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|422768421|ref|ZP_16822146.1| protein-P-II uridylyltransferase [Escherichia coli E1520]
gi|323935006|gb|EGB31379.1| protein-P-II uridylyltransferase [Escherichia coli E1520]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|300919730|ref|ZP_07136216.1| protein-P-II uridylyltransferase [Escherichia coli MS 115-1]
gi|432529467|ref|ZP_19766525.1| [protein-PII] uridylyltransferase [Escherichia coli KTE233]
gi|432532380|ref|ZP_19769388.1| [protein-PII] uridylyltransferase [Escherichia coli KTE234]
gi|300413230|gb|EFJ96540.1| protein-P-II uridylyltransferase [Escherichia coli MS 115-1]
gi|431057805|gb|ELD67223.1| [protein-PII] uridylyltransferase [Escherichia coli KTE233]
gi|431064861|gb|ELD73719.1| [protein-PII] uridylyltransferase [Escherichia coli KTE234]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419937859|ref|ZP_14454705.1| PII uridylyl-transferase [Escherichia coli 75]
gi|388411398|gb|EIL71579.1| PII uridylyl-transferase [Escherichia coli 75]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|415777475|ref|ZP_11488704.1| protein-P-II uridylyltransferase [Escherichia coli 3431]
gi|315616350|gb|EFU96968.1| protein-P-II uridylyltransferase [Escherichia coli 3431]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|222154992|ref|YP_002555131.1| [Protein-PII] uridylyltransferase [Escherichia coli LF82]
gi|306815233|ref|ZP_07449382.1| PII uridylyl-transferase [Escherichia coli NC101]
gi|387615514|ref|YP_006118536.1| PII uridylyl-transferase [Escherichia coli O83:H1 str. NRG 857C]
gi|419699096|ref|ZP_14226719.1| PII uridylyl-transferase [Escherichia coli SCI-07]
gi|422380522|ref|ZP_16460700.1| protein-P-II uridylyltransferase [Escherichia coli MS 57-2]
gi|432384723|ref|ZP_19627636.1| [protein-PII] uridylyltransferase [Escherichia coli KTE15]
gi|432385552|ref|ZP_19628454.1| [protein-PII] uridylyltransferase [Escherichia coli KTE16]
gi|432430327|ref|ZP_19672777.1| [protein-PII] uridylyltransferase [Escherichia coli KTE187]
gi|432512364|ref|ZP_19749611.1| [protein-PII] uridylyltransferase [Escherichia coli KTE224]
gi|432609872|ref|ZP_19846048.1| [protein-PII] uridylyltransferase [Escherichia coli KTE72]
gi|432644575|ref|ZP_19880382.1| [protein-PII] uridylyltransferase [Escherichia coli KTE86]
gi|432654209|ref|ZP_19889931.1| [protein-PII] uridylyltransferase [Escherichia coli KTE93]
gi|432697473|ref|ZP_19932649.1| [protein-PII] uridylyltransferase [Escherichia coli KTE169]
gi|432744092|ref|ZP_19978801.1| [protein-PII] uridylyltransferase [Escherichia coli KTE43]
gi|432842428|ref|ZP_20075856.1| [protein-PII] uridylyltransferase [Escherichia coli KTE141]
gi|432902467|ref|ZP_20112215.1| [protein-PII] uridylyltransferase [Escherichia coli KTE194]
gi|432941861|ref|ZP_20139359.1| [protein-PII] uridylyltransferase [Escherichia coli KTE183]
gi|432970303|ref|ZP_20159185.1| [protein-PII] uridylyltransferase [Escherichia coli KTE207]
gi|432983889|ref|ZP_20172631.1| [protein-PII] uridylyltransferase [Escherichia coli KTE215]
gi|433037092|ref|ZP_20224720.1| [protein-PII] uridylyltransferase [Escherichia coli KTE113]
gi|433081071|ref|ZP_20267551.1| [protein-PII] uridylyltransferase [Escherichia coli KTE133]
gi|433099705|ref|ZP_20285826.1| [protein-PII] uridylyltransferase [Escherichia coli KTE145]
gi|433142665|ref|ZP_20327851.1| [protein-PII] uridylyltransferase [Escherichia coli KTE168]
gi|433191488|ref|ZP_20375555.1| [protein-PII] uridylyltransferase [Escherichia coli KTE88]
gi|433196736|ref|ZP_20380674.1| [protein-PII] uridylyltransferase [Escherichia coli KTE94]
gi|433206337|ref|ZP_20390046.1| [protein-PII] uridylyltransferase [Escherichia coli KTE97]
gi|222031997|emb|CAP74736.1| [Protein-PII] uridylyltransferase [Escherichia coli LF82]
gi|305850895|gb|EFM51350.1| PII uridylyl-transferase [Escherichia coli NC101]
gi|312944775|gb|ADR25602.1| PII uridylyl-transferase [Escherichia coli O83:H1 str. NRG 857C]
gi|324008262|gb|EGB77481.1| protein-P-II uridylyltransferase [Escherichia coli MS 57-2]
gi|380349738|gb|EIA38003.1| PII uridylyl-transferase [Escherichia coli SCI-07]
gi|430901946|gb|ELC23842.1| [protein-PII] uridylyltransferase [Escherichia coli KTE15]
gi|430911080|gb|ELC32378.1| [protein-PII] uridylyltransferase [Escherichia coli KTE16]
gi|430957633|gb|ELC76285.1| [protein-PII] uridylyltransferase [Escherichia coli KTE187]
gi|431045494|gb|ELD55727.1| [protein-PII] uridylyltransferase [Escherichia coli KTE224]
gi|431152503|gb|ELE53454.1| [protein-PII] uridylyltransferase [Escherichia coli KTE72]
gi|431185579|gb|ELE85308.1| [protein-PII] uridylyltransferase [Escherichia coli KTE86]
gi|431196257|gb|ELE95202.1| [protein-PII] uridylyltransferase [Escherichia coli KTE93]
gi|431247662|gb|ELF41883.1| [protein-PII] uridylyltransferase [Escherichia coli KTE169]
gi|431296465|gb|ELF86177.1| [protein-PII] uridylyltransferase [Escherichia coli KTE43]
gi|431398196|gb|ELG81619.1| [protein-PII] uridylyltransferase [Escherichia coli KTE141]
gi|431438596|gb|ELH19970.1| [protein-PII] uridylyltransferase [Escherichia coli KTE194]
gi|431456462|gb|ELH36806.1| [protein-PII] uridylyltransferase [Escherichia coli KTE183]
gi|431487745|gb|ELH67389.1| [protein-PII] uridylyltransferase [Escherichia coli KTE207]
gi|431507955|gb|ELH86237.1| [protein-PII] uridylyltransferase [Escherichia coli KTE215]
gi|431557200|gb|ELI30974.1| [protein-PII] uridylyltransferase [Escherichia coli KTE113]
gi|431607323|gb|ELI76693.1| [protein-PII] uridylyltransferase [Escherichia coli KTE133]
gi|431624028|gb|ELI92652.1| [protein-PII] uridylyltransferase [Escherichia coli KTE145]
gi|431668045|gb|ELJ34621.1| [protein-PII] uridylyltransferase [Escherichia coli KTE168]
gi|431699557|gb|ELJ64562.1| [protein-PII] uridylyltransferase [Escherichia coli KTE88]
gi|431726634|gb|ELJ90442.1| [protein-PII] uridylyltransferase [Escherichia coli KTE94]
gi|431733936|gb|ELJ97339.1| [protein-PII] uridylyltransferase [Escherichia coli KTE97]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|218703421|ref|YP_002410940.1| PII uridylyl-transferase [Escherichia coli UMN026]
gi|293403236|ref|ZP_06647333.1| PII uridylyl-transferase [Escherichia coli FVEC1412]
gi|293408259|ref|ZP_06652099.1| hypothetical protein ECEG_03193 [Escherichia coli B354]
gi|298378771|ref|ZP_06988655.1| uridylyltransferase [Escherichia coli FVEC1302]
gi|300900796|ref|ZP_07118939.1| protein-P-II uridylyltransferase [Escherichia coli MS 198-1]
gi|331661541|ref|ZP_08362465.1| protein-P-II uridylyltransferase [Escherichia coli TA143]
gi|331681552|ref|ZP_08382189.1| protein-P-II uridylyltransferase [Escherichia coli H299]
gi|387605642|ref|YP_006094498.1| [protein-PII] uridylyltransferase [Escherichia coli 042]
gi|419935229|ref|ZP_14452314.1| PII uridylyl-transferase [Escherichia coli 576-1]
gi|432351799|ref|ZP_19595112.1| [protein-PII] uridylyltransferase [Escherichia coli KTE2]
gi|432400245|ref|ZP_19643006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE26]
gi|432429276|ref|ZP_19671742.1| [protein-PII] uridylyltransferase [Escherichia coli KTE181]
gi|432464018|ref|ZP_19706138.1| [protein-PII] uridylyltransferase [Escherichia coli KTE204]
gi|432474162|ref|ZP_19716179.1| [protein-PII] uridylyltransferase [Escherichia coli KTE208]
gi|432492469|ref|ZP_19734314.1| [protein-PII] uridylyltransferase [Escherichia coli KTE213]
gi|432520814|ref|ZP_19757985.1| [protein-PII] uridylyltransferase [Escherichia coli KTE228]
gi|432540988|ref|ZP_19777868.1| [protein-PII] uridylyltransferase [Escherichia coli KTE235]
gi|432614969|ref|ZP_19851106.1| [protein-PII] uridylyltransferase [Escherichia coli KTE75]
gi|432634611|ref|ZP_19870518.1| [protein-PII] uridylyltransferase [Escherichia coli KTE80]
gi|432644202|ref|ZP_19880016.1| [protein-PII] uridylyltransferase [Escherichia coli KTE83]
gi|432664322|ref|ZP_19899924.1| [protein-PII] uridylyltransferase [Escherichia coli KTE116]
gi|432768974|ref|ZP_20003353.1| [protein-PII] uridylyltransferase [Escherichia coli KTE50]
gi|432773317|ref|ZP_20007619.1| [protein-PII] uridylyltransferase [Escherichia coli KTE54]
gi|432837725|ref|ZP_20071221.1| [protein-PII] uridylyltransferase [Escherichia coli KTE140]
gi|432883856|ref|ZP_20099059.1| [protein-PII] uridylyltransferase [Escherichia coli KTE158]
gi|432909723|ref|ZP_20116996.1| [protein-PII] uridylyltransferase [Escherichia coli KTE190]
gi|432958894|ref|ZP_20149752.1| [protein-PII] uridylyltransferase [Escherichia coli KTE202]
gi|433017139|ref|ZP_20205415.1| [protein-PII] uridylyltransferase [Escherichia coli KTE105]
gi|433051380|ref|ZP_20238629.1| [protein-PII] uridylyltransferase [Escherichia coli KTE122]
gi|433061373|ref|ZP_20248347.1| [protein-PII] uridylyltransferase [Escherichia coli KTE125]
gi|433066286|ref|ZP_20253141.1| [protein-PII] uridylyltransferase [Escherichia coli KTE128]
gi|433157103|ref|ZP_20341986.1| [protein-PII] uridylyltransferase [Escherichia coli KTE177]
gi|433176526|ref|ZP_20361006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE82]
gi|433201606|ref|ZP_20385423.1| [protein-PII] uridylyltransferase [Escherichia coli KTE95]
gi|226723943|sp|B7N834.1|GLND_ECOLU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218430518|emb|CAR11384.1| uridylyltransferase [Escherichia coli UMN026]
gi|284919942|emb|CBG32997.1| [protein-PII] uridylyltransferase [Escherichia coli 042]
gi|291430151|gb|EFF03165.1| PII uridylyl-transferase [Escherichia coli FVEC1412]
gi|291472510|gb|EFF14992.1| hypothetical protein ECEG_03193 [Escherichia coli B354]
gi|298281105|gb|EFI22606.1| uridylyltransferase [Escherichia coli FVEC1302]
gi|300355714|gb|EFJ71584.1| protein-P-II uridylyltransferase [Escherichia coli MS 198-1]
gi|331061456|gb|EGI33419.1| protein-P-II uridylyltransferase [Escherichia coli TA143]
gi|331081773|gb|EGI52934.1| protein-P-II uridylyltransferase [Escherichia coli H299]
gi|388404967|gb|EIL65406.1| PII uridylyl-transferase [Escherichia coli 576-1]
gi|430881378|gb|ELC04632.1| [protein-PII] uridylyltransferase [Escherichia coli KTE2]
gi|430930360|gb|ELC50861.1| [protein-PII] uridylyltransferase [Escherichia coli KTE26]
gi|430948458|gb|ELC68046.1| [protein-PII] uridylyltransferase [Escherichia coli KTE181]
gi|430983321|gb|ELC99984.1| [protein-PII] uridylyltransferase [Escherichia coli KTE204]
gi|431011853|gb|ELD25927.1| [protein-PII] uridylyltransferase [Escherichia coli KTE208]
gi|431014221|gb|ELD27930.1| [protein-PII] uridylyltransferase [Escherichia coli KTE213]
gi|431046197|gb|ELD56316.1| [protein-PII] uridylyltransferase [Escherichia coli KTE228]
gi|431065143|gb|ELD73920.1| [protein-PII] uridylyltransferase [Escherichia coli KTE235]
gi|431158678|gb|ELE59276.1| [protein-PII] uridylyltransferase [Escherichia coli KTE75]
gi|431165463|gb|ELE65816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE80]
gi|431176083|gb|ELE76069.1| [protein-PII] uridylyltransferase [Escherichia coli KTE83]
gi|431205361|gb|ELF03854.1| [protein-PII] uridylyltransferase [Escherichia coli KTE116]
gi|431320132|gb|ELG07780.1| [protein-PII] uridylyltransferase [Escherichia coli KTE50]
gi|431321827|gb|ELG09427.1| [protein-PII] uridylyltransferase [Escherichia coli KTE54]
gi|431392556|gb|ELG76129.1| [protein-PII] uridylyltransferase [Escherichia coli KTE140]
gi|431420782|gb|ELH03058.1| [protein-PII] uridylyltransferase [Escherichia coli KTE158]
gi|431448773|gb|ELH29486.1| [protein-PII] uridylyltransferase [Escherichia coli KTE190]
gi|431483389|gb|ELH63081.1| [protein-PII] uridylyltransferase [Escherichia coli KTE202]
gi|431538071|gb|ELI14176.1| [protein-PII] uridylyltransferase [Escherichia coli KTE105]
gi|431576473|gb|ELI49160.1| [protein-PII] uridylyltransferase [Escherichia coli KTE122]
gi|431589652|gb|ELI60866.1| [protein-PII] uridylyltransferase [Escherichia coli KTE125]
gi|431593148|gb|ELI63712.1| [protein-PII] uridylyltransferase [Escherichia coli KTE128]
gi|431683272|gb|ELJ48910.1| [protein-PII] uridylyltransferase [Escherichia coli KTE177]
gi|431711703|gb|ELJ76016.1| [protein-PII] uridylyltransferase [Escherichia coli KTE82]
gi|431727332|gb|ELJ91092.1| [protein-PII] uridylyltransferase [Escherichia coli KTE95]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|110804219|ref|YP_687739.1| PII uridylyl-transferase [Shigella flexneri 5 str. 8401]
gi|424836686|ref|ZP_18261323.1| PII uridylyl-transferase [Shigella flexneri 5a str. M90T]
gi|123343151|sp|Q0T842.1|GLND_SHIF8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|110613767|gb|ABF02434.1| protein PII [Shigella flexneri 5 str. 8401]
gi|383465738|gb|EID60759.1| PII uridylyl-transferase [Shigella flexneri 5a str. M90T]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417584985|ref|ZP_12235768.1| protein-P-II uridylyltransferase [Escherichia coli STEC_C165-02]
gi|345342348|gb|EGW74744.1| protein-P-II uridylyltransferase [Escherichia coli STEC_C165-02]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|301025953|ref|ZP_07189437.1| protein-P-II uridylyltransferase [Escherichia coli MS 69-1]
gi|419918944|ref|ZP_14437116.1| PII uridylyl-transferase [Escherichia coli KD2]
gi|432546483|ref|ZP_19783295.1| [protein-PII] uridylyltransferase [Escherichia coli KTE236]
gi|432546888|ref|ZP_19783688.1| [protein-PII] uridylyltransferase [Escherichia coli KTE237]
gi|432625132|ref|ZP_19861131.1| [protein-PII] uridylyltransferase [Escherichia coli KTE76]
gi|300395752|gb|EFJ79290.1| protein-P-II uridylyltransferase [Escherichia coli MS 69-1]
gi|388389015|gb|EIL50558.1| PII uridylyl-transferase [Escherichia coli KD2]
gi|431068265|gb|ELD76770.1| [protein-PII] uridylyltransferase [Escherichia coli KTE236]
gi|431086700|gb|ELD92722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE237]
gi|431153198|gb|ELE54117.1| [protein-PII] uridylyltransferase [Escherichia coli KTE76]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|16128160|ref|NP_414709.1| uridylyltransferase [Escherichia coli str. K-12 substr. MG1655]
gi|170079803|ref|YP_001729123.1| PII uridylyl-transferase [Escherichia coli str. K-12 substr. DH10B]
gi|238899565|ref|YP_002925361.1| PII uridylyl-transferase [Escherichia coli BW2952]
gi|300949802|ref|ZP_07163775.1| protein-P-II uridylyltransferase [Escherichia coli MS 116-1]
gi|300956049|ref|ZP_07168375.1| protein-P-II uridylyltransferase [Escherichia coli MS 175-1]
gi|301646488|ref|ZP_07246365.1| protein-P-II uridylyltransferase [Escherichia coli MS 146-1]
gi|331640621|ref|ZP_08341769.1| protein-P-II uridylyltransferase [Escherichia coli H736]
gi|386279211|ref|ZP_10056899.1| [protein-PII] uridylyltransferase [Escherichia sp. 4_1_40B]
gi|386596940|ref|YP_006093340.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli DH1]
gi|386612330|ref|YP_006131996.1| PII uridylyltransferase GlnD [Escherichia coli UMNK88]
gi|387610639|ref|YP_006113755.1| [protein-PII] uridylyltransferase [Escherichia coli ETEC H10407]
gi|387619934|ref|YP_006127561.1| PII uridylyl-transferase [Escherichia coli DH1]
gi|388476285|ref|YP_488469.1| uridylyltransferase [Escherichia coli str. K-12 substr. W3110]
gi|417260536|ref|ZP_12048034.1| protein-P-II uridylyltransferase [Escherichia coli 2.3916]
gi|417279585|ref|ZP_12066891.1| protein-P-II uridylyltransferase [Escherichia coli 3.2303]
gi|417293130|ref|ZP_12080410.1| protein-P-II uridylyltransferase [Escherichia coli B41]
gi|417611177|ref|ZP_12261653.1| protein-P-II uridylyltransferase [Escherichia coli STEC_EH250]
gi|417616506|ref|ZP_12266945.1| protein-P-II uridylyltransferase [Escherichia coli G58-1]
gi|417632645|ref|ZP_12282868.1| protein-P-II uridylyltransferase [Escherichia coli STEC_S1191]
gi|417944187|ref|ZP_12587431.1| PII uridylyl-transferase [Escherichia coli XH140A]
gi|417975923|ref|ZP_12616719.1| PII uridylyl-transferase [Escherichia coli XH001]
gi|418301053|ref|ZP_12912847.1| protein-P-II uridylyltransferase [Escherichia coli UMNF18]
gi|418959616|ref|ZP_13511514.1| protein-P-II uridylyltransferase [Escherichia coli J53]
gi|419140536|ref|ZP_13685295.1| protein-P-II uridylyltransferase [Escherichia coli DEC6A]
gi|419146108|ref|ZP_13690806.1| protein-P-II uridylyltransferase [Escherichia coli DEC6B]
gi|419152007|ref|ZP_13696599.1| protein-P-II uridylyltransferase [Escherichia coli DEC6C]
gi|419157423|ref|ZP_13701954.1| protein-P-II uridylyltransferase [Escherichia coli DEC6D]
gi|419162429|ref|ZP_13706910.1| protein-P-II uridylyltransferase [Escherichia coli DEC6E]
gi|419173552|ref|ZP_13717414.1| protein-P-II uridylyltransferase [Escherichia coli DEC7B]
gi|419812929|ref|ZP_14337789.1| PII uridylyl-transferase [Escherichia coli O32:H37 str. P4]
gi|422772911|ref|ZP_16826597.1| protein-P-II uridylyltransferase [Escherichia coli E482]
gi|422792818|ref|ZP_16845517.1| protein-P-II uridylyltransferase [Escherichia coli TA007]
gi|422816182|ref|ZP_16864397.1| [protein-PII] uridylyltransferase [Escherichia coli M919]
gi|425113487|ref|ZP_18515342.1| protein-P-II uridylyltransferase [Escherichia coli 8.0566]
gi|425118238|ref|ZP_18519992.1| protein-P-II uridylyltransferase [Escherichia coli 8.0569]
gi|425270875|ref|ZP_18662400.1| protein-P-II uridylyltransferase [Escherichia coli TW15901]
gi|425281498|ref|ZP_18672629.1| protein-P-II uridylyltransferase [Escherichia coli TW00353]
gi|432415118|ref|ZP_19657753.1| [protein-PII] uridylyltransferase [Escherichia coli KTE44]
gi|432578879|ref|ZP_19815315.1| [protein-PII] uridylyltransferase [Escherichia coli KTE56]
gi|432625725|ref|ZP_19861714.1| [protein-PII] uridylyltransferase [Escherichia coli KTE77]
gi|432635485|ref|ZP_19871375.1| [protein-PII] uridylyltransferase [Escherichia coli KTE81]
gi|432689950|ref|ZP_19925204.1| [protein-PII] uridylyltransferase [Escherichia coli KTE161]
gi|432702709|ref|ZP_19937841.1| [protein-PII] uridylyltransferase [Escherichia coli KTE171]
gi|432735630|ref|ZP_19970422.1| [protein-PII] uridylyltransferase [Escherichia coli KTE42]
gi|432952823|ref|ZP_20145566.1| [protein-PII] uridylyltransferase [Escherichia coli KTE197]
gi|450238435|ref|ZP_21898863.1| PII uridylyl-transferase [Escherichia coli S17]
gi|544396|sp|P27249.2|GLND_ECOLI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229487473|sp|B1XD36.1|GLND_ECODH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492001|sp|C4ZRQ9.1|GLND_ECOBW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1552744|gb|AAB08596.1| PII uridylyl-transferase [Escherichia coli]
gi|1786363|gb|AAC73278.1| uridylyltransferase [Escherichia coli str. K-12 substr. MG1655]
gi|85674365|dbj|BAE76045.1| uridylyltransferase [Escherichia coli str. K12 substr. W3110]
gi|169887638|gb|ACB01345.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli str.
K-12 substr. DH10B]
gi|238863774|gb|ACR65772.1| uridylyltransferase [Escherichia coli BW2952]
gi|260450629|gb|ACX41051.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli DH1]
gi|300317113|gb|EFJ66897.1| protein-P-II uridylyltransferase [Escherichia coli MS 175-1]
gi|300450800|gb|EFK14420.1| protein-P-II uridylyltransferase [Escherichia coli MS 116-1]
gi|301075314|gb|EFK90120.1| protein-P-II uridylyltransferase [Escherichia coli MS 146-1]
gi|309700375|emb|CBI99663.1| [protein-PII] uridylyltransferase [Escherichia coli ETEC H10407]
gi|315134857|dbj|BAJ42016.1| PII uridylyl-transferase [Escherichia coli DH1]
gi|323939958|gb|EGB36156.1| protein-P-II uridylyltransferase [Escherichia coli E482]
gi|323970646|gb|EGB65902.1| protein-P-II uridylyltransferase [Escherichia coli TA007]
gi|331040367|gb|EGI12574.1| protein-P-II uridylyltransferase [Escherichia coli H736]
gi|332341499|gb|AEE54833.1| PII uridylyltransferase GlnD [Escherichia coli UMNK88]
gi|339413151|gb|AEJ54823.1| protein-P-II uridylyltransferase [Escherichia coli UMNF18]
gi|342364015|gb|EGU28118.1| PII uridylyl-transferase [Escherichia coli XH140A]
gi|344194321|gb|EGV48395.1| PII uridylyl-transferase [Escherichia coli XH001]
gi|345367151|gb|EGW99238.1| protein-P-II uridylyltransferase [Escherichia coli STEC_EH250]
gi|345383640|gb|EGX13513.1| protein-P-II uridylyltransferase [Escherichia coli G58-1]
gi|345391442|gb|EGX21232.1| protein-P-II uridylyltransferase [Escherichia coli STEC_S1191]
gi|359331025|dbj|BAL37472.1| uridylyltransferase [Escherichia coli str. K-12 substr. MDS42]
gi|378000719|gb|EHV63785.1| protein-P-II uridylyltransferase [Escherichia coli DEC6A]
gi|378002544|gb|EHV65595.1| protein-P-II uridylyltransferase [Escherichia coli DEC6B]
gi|378004131|gb|EHV67160.1| protein-P-II uridylyltransferase [Escherichia coli DEC6C]
gi|378015589|gb|EHV78483.1| protein-P-II uridylyltransferase [Escherichia coli DEC6D]
gi|378017577|gb|EHV80449.1| protein-P-II uridylyltransferase [Escherichia coli DEC6E]
gi|378039043|gb|EHW01548.1| protein-P-II uridylyltransferase [Escherichia coli DEC7B]
gi|384377837|gb|EIE35730.1| protein-P-II uridylyltransferase [Escherichia coli J53]
gi|385154228|gb|EIF16244.1| PII uridylyl-transferase [Escherichia coli O32:H37 str. P4]
gi|385540581|gb|EIF87402.1| [protein-PII] uridylyltransferase [Escherichia coli M919]
gi|386123800|gb|EIG72389.1| [protein-PII] uridylyltransferase [Escherichia sp. 4_1_40B]
gi|386225694|gb|EII48019.1| protein-P-II uridylyltransferase [Escherichia coli 2.3916]
gi|386237684|gb|EII74628.1| protein-P-II uridylyltransferase [Escherichia coli 3.2303]
gi|386252702|gb|EIJ02393.1| protein-P-II uridylyltransferase [Escherichia coli B41]
gi|408200406|gb|EKI25587.1| protein-P-II uridylyltransferase [Escherichia coli TW15901]
gi|408206721|gb|EKI31493.1| protein-P-II uridylyltransferase [Escherichia coli TW00353]
gi|408573865|gb|EKK49671.1| protein-P-II uridylyltransferase [Escherichia coli 8.0566]
gi|408574454|gb|EKK50224.1| protein-P-II uridylyltransferase [Escherichia coli 8.0569]
gi|430944543|gb|ELC64636.1| [protein-PII] uridylyltransferase [Escherichia coli KTE44]
gi|431109835|gb|ELE13785.1| [protein-PII] uridylyltransferase [Escherichia coli KTE56]
gi|431166077|gb|ELE66404.1| [protein-PII] uridylyltransferase [Escherichia coli KTE77]
gi|431174751|gb|ELE74787.1| [protein-PII] uridylyltransferase [Escherichia coli KTE81]
gi|431232623|gb|ELF28289.1| [protein-PII] uridylyltransferase [Escherichia coli KTE161]
gi|431248110|gb|ELF42319.1| [protein-PII] uridylyltransferase [Escherichia coli KTE171]
gi|431287901|gb|ELF78687.1| [protein-PII] uridylyltransferase [Escherichia coli KTE42]
gi|431472548|gb|ELH52436.1| [protein-PII] uridylyltransferase [Escherichia coli KTE197]
gi|449325750|gb|EMD15652.1| PII uridylyl-transferase [Escherichia coli S17]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|194433447|ref|ZP_03065726.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1012]
gi|416284601|ref|ZP_11647351.1| PII uridylyl-transferase [Shigella boydii ATCC 9905]
gi|417670845|ref|ZP_12320347.1| protein-P-II uridylyltransferase [Shigella dysenteriae 155-74]
gi|417687946|ref|ZP_12337198.1| protein-P-II uridylyltransferase [Shigella boydii 5216-82]
gi|420345258|ref|ZP_14846693.1| protein-P-II uridylyltransferase [Shigella boydii 965-58]
gi|194418375|gb|EDX34465.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1012]
gi|320179908|gb|EFW54852.1| PII uridylyl-transferase [Shigella boydii ATCC 9905]
gi|332095208|gb|EGJ00237.1| protein-P-II uridylyltransferase [Shigella boydii 5216-82]
gi|332098225|gb|EGJ03198.1| protein-P-II uridylyltransferase [Shigella dysenteriae 155-74]
gi|391277041|gb|EIQ35802.1| protein-P-II uridylyltransferase [Shigella boydii 965-58]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|193067726|ref|ZP_03048693.1| protein-P-II uridylyltransferase [Escherichia coli E110019]
gi|260853377|ref|YP_003227268.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. 11368]
gi|300824110|ref|ZP_07104230.1| protein-P-II uridylyltransferase [Escherichia coli MS 119-7]
gi|307311386|ref|ZP_07591028.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli W]
gi|331666408|ref|ZP_08367289.1| protein-P-II uridylyltransferase [Escherichia coli TA271]
gi|331680746|ref|ZP_08381405.1| protein-P-II uridylyltransferase [Escherichia coli H591]
gi|378714495|ref|YP_005279388.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli KO11FL]
gi|386607468|ref|YP_006122954.1| uridylyltransferase [Escherichia coli W]
gi|386698665|ref|YP_006162502.1| PII uridylyl-transferase [Escherichia coli KO11FL]
gi|386707895|ref|YP_006171616.1| PII uridylyl-transferase [Escherichia coli W]
gi|415780886|ref|ZP_11490673.1| protein-P-II uridylyltransferase [Escherichia coli EPECa14]
gi|417225071|ref|ZP_12028362.1| protein-P-II uridylyltransferase [Escherichia coli 96.154]
gi|417268668|ref|ZP_12056028.1| protein-P-II uridylyltransferase [Escherichia coli 3.3884]
gi|417295368|ref|ZP_12082621.1| protein-P-II uridylyltransferase [Escherichia coli 900105 (10e)]
gi|417600429|ref|ZP_12251016.1| protein-P-II uridylyltransferase [Escherichia coli STEC_94C]
gi|419207117|ref|ZP_13750248.1| protein-P-II uridylyltransferase [Escherichia coli DEC8C]
gi|419213540|ref|ZP_13756575.1| protein-P-II uridylyltransferase [Escherichia coli DEC8D]
gi|419224812|ref|ZP_13767707.1| protein-P-II uridylyltransferase [Escherichia coli DEC9A]
gi|419230692|ref|ZP_13773488.1| protein-P-II uridylyltransferase [Escherichia coli DEC9B]
gi|419235978|ref|ZP_13778731.1| protein-P-II uridylyltransferase [Escherichia coli DEC9C]
gi|419241565|ref|ZP_13784217.1| protein-P-II uridylyltransferase [Escherichia coli DEC9D]
gi|419246969|ref|ZP_13789588.1| protein-P-II uridylyltransferase [Escherichia coli DEC9E]
gi|419252804|ref|ZP_13795356.1| protein-P-II uridylyltransferase [Escherichia coli DEC10A]
gi|419258747|ref|ZP_13801211.1| protein-P-II uridylyltransferase [Escherichia coli DEC10B]
gi|419264574|ref|ZP_13806964.1| protein-P-II uridylyltransferase [Escherichia coli DEC10C]
gi|419270350|ref|ZP_13812685.1| protein-P-II uridylyltransferase [Escherichia coli DEC10D]
gi|419281797|ref|ZP_13824022.1| protein-P-II uridylyltransferase [Escherichia coli DEC10F]
gi|419875702|ref|ZP_14397527.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9534]
gi|419880111|ref|ZP_14401520.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9545]
gi|419904656|ref|ZP_14423647.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9942]
gi|419906045|ref|ZP_14424979.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli O26:H11 str.
CVM10026]
gi|419929371|ref|ZP_14447046.1| PII uridylyl-transferase [Escherichia coli 541-1]
gi|420100304|ref|ZP_14611484.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9455]
gi|420105948|ref|ZP_14616380.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9553]
gi|420113080|ref|ZP_14622845.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10021]
gi|420119492|ref|ZP_14628768.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10030]
gi|420125531|ref|ZP_14634333.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10224]
gi|420132862|ref|ZP_14641165.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9952]
gi|422776804|ref|ZP_16830458.1| protein-P-II uridylyltransferase [Escherichia coli H120]
gi|423709887|ref|ZP_17684241.1| [protein-PII] uridylyltransferase [Escherichia coli B799]
gi|424746707|ref|ZP_18174929.1| PII uridylyl-transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756654|ref|ZP_18184460.1| PII uridylyl-transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425376906|ref|ZP_18761338.1| protein-P-II uridylyltransferase [Escherichia coli EC1865]
gi|432379782|ref|ZP_19622757.1| [protein-PII] uridylyltransferase [Escherichia coli KTE12]
gi|432752992|ref|ZP_19987563.1| [protein-PII] uridylyltransferase [Escherichia coli KTE29]
gi|432833267|ref|ZP_20066816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE136]
gi|192959138|gb|EDV89574.1| protein-P-II uridylyltransferase [Escherichia coli E110019]
gi|257752026|dbj|BAI23528.1| uridylyltransferase [Escherichia coli O26:H11 str. 11368]
gi|300523387|gb|EFK44456.1| protein-P-II uridylyltransferase [Escherichia coli MS 119-7]
gi|306908365|gb|EFN38863.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli W]
gi|315059385|gb|ADT73712.1| uridylyltransferase [Escherichia coli W]
gi|323157997|gb|EFZ44099.1| protein-P-II uridylyltransferase [Escherichia coli EPECa14]
gi|323380056|gb|ADX52324.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli KO11FL]
gi|323945641|gb|EGB41690.1| protein-P-II uridylyltransferase [Escherichia coli H120]
gi|331066619|gb|EGI38496.1| protein-P-II uridylyltransferase [Escherichia coli TA271]
gi|331072209|gb|EGI43545.1| protein-P-II uridylyltransferase [Escherichia coli H591]
gi|345354587|gb|EGW86808.1| protein-P-II uridylyltransferase [Escherichia coli STEC_94C]
gi|378064659|gb|EHW26819.1| protein-P-II uridylyltransferase [Escherichia coli DEC8C]
gi|378070155|gb|EHW32238.1| protein-P-II uridylyltransferase [Escherichia coli DEC8D]
gi|378083212|gb|EHW45147.1| protein-P-II uridylyltransferase [Escherichia coli DEC9A]
gi|378083559|gb|EHW45491.1| protein-P-II uridylyltransferase [Escherichia coli DEC9B]
gi|378091386|gb|EHW53217.1| protein-P-II uridylyltransferase [Escherichia coli DEC9C]
gi|378095870|gb|EHW57652.1| protein-P-II uridylyltransferase [Escherichia coli DEC9D]
gi|378103985|gb|EHW65647.1| protein-P-II uridylyltransferase [Escherichia coli DEC9E]
gi|378108908|gb|EHW70520.1| protein-P-II uridylyltransferase [Escherichia coli DEC10A]
gi|378118769|gb|EHW80271.1| protein-P-II uridylyltransferase [Escherichia coli DEC10B]
gi|378120188|gb|EHW81669.1| protein-P-II uridylyltransferase [Escherichia coli DEC10C]
gi|378122094|gb|EHW83538.1| protein-P-II uridylyltransferase [Escherichia coli DEC10D]
gi|378141397|gb|EHX02614.1| protein-P-II uridylyltransferase [Escherichia coli DEC10F]
gi|383390192|gb|AFH15150.1| PII uridylyl-transferase [Escherichia coli KO11FL]
gi|383403587|gb|AFH09830.1| PII uridylyl-transferase [Escherichia coli W]
gi|385705105|gb|EIG42172.1| [protein-PII] uridylyltransferase [Escherichia coli B799]
gi|386200119|gb|EIH99110.1| protein-P-II uridylyltransferase [Escherichia coli 96.154]
gi|386227473|gb|EII54829.1| protein-P-II uridylyltransferase [Escherichia coli 3.3884]
gi|386260987|gb|EIJ16455.1| protein-P-II uridylyltransferase [Escherichia coli 900105 (10e)]
gi|388347920|gb|EIL13567.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9534]
gi|388367120|gb|EIL30815.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9942]
gi|388369919|gb|EIL33485.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9545]
gi|388379975|gb|EIL42601.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli O26:H11 str.
CVM10026]
gi|388403398|gb|EIL63925.1| PII uridylyl-transferase [Escherichia coli 541-1]
gi|394394956|gb|EJE71472.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10224]
gi|394412966|gb|EJE87052.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10021]
gi|394417696|gb|EJE91413.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9553]
gi|394421011|gb|EJE94506.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9455]
gi|394427722|gb|EJF00375.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9952]
gi|394431367|gb|EJF03575.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10030]
gi|408311107|gb|EKJ28119.1| protein-P-II uridylyltransferase [Escherichia coli EC1865]
gi|421947724|gb|EKU04787.1| PII uridylyl-transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949576|gb|EKU06510.1| PII uridylyl-transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|430894391|gb|ELC16680.1| [protein-PII] uridylyltransferase [Escherichia coli KTE12]
gi|431291650|gb|ELF82153.1| [protein-PII] uridylyltransferase [Escherichia coli KTE29]
gi|431389366|gb|ELG73079.1| [protein-PII] uridylyltransferase [Escherichia coli KTE136]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|82542766|ref|YP_406713.1| PII uridylyl-transferase [Shigella boydii Sb227]
gi|157159632|ref|YP_001456950.1| PII uridylyl-transferase [Escherichia coli HS]
gi|191166326|ref|ZP_03028158.1| protein-P-II uridylyltransferase [Escherichia coli B7A]
gi|193063184|ref|ZP_03044275.1| protein-P-II uridylyltransferase [Escherichia coli E22]
gi|194428269|ref|ZP_03060811.1| protein-P-II uridylyltransferase [Escherichia coli B171]
gi|209917357|ref|YP_002291441.1| PII uridylyl-transferase [Escherichia coli SE11]
gi|218552746|ref|YP_002385659.1| PII uridylyl-transferase [Escherichia coli IAI1]
gi|218693631|ref|YP_002401298.1| PII uridylyl-transferase [Escherichia coli 55989]
gi|260842399|ref|YP_003220177.1| uridylyltransferase [Escherichia coli O103:H2 str. 12009]
gi|293418053|ref|ZP_06660675.1| P-II uridylyltransferase [Escherichia coli B185]
gi|293476824|ref|ZP_06665232.1| protein-P-II uridylyltransferase [Escherichia coli B088]
gi|300816207|ref|ZP_07096430.1| protein-P-II uridylyltransferase [Escherichia coli MS 107-1]
gi|300901986|ref|ZP_07120013.1| protein-P-II uridylyltransferase [Escherichia coli MS 84-1]
gi|300923041|ref|ZP_07139108.1| protein-P-II uridylyltransferase [Escherichia coli MS 182-1]
gi|301305303|ref|ZP_07211399.1| protein-P-II uridylyltransferase [Escherichia coli MS 124-1]
gi|301330035|ref|ZP_07222719.1| protein-P-II uridylyltransferase [Escherichia coli MS 78-1]
gi|309796344|ref|ZP_07690753.1| protein-P-II uridylyltransferase [Escherichia coli MS 145-7]
gi|331651072|ref|ZP_08352100.1| protein-P-II uridylyltransferase [Escherichia coli M718]
gi|332282841|ref|ZP_08395254.1| uridylyltransferase [Shigella sp. D9]
gi|407467621|ref|YP_006785937.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483662|ref|YP_006780811.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484202|ref|YP_006771748.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415801931|ref|ZP_11499822.1| protein-P-II uridylyltransferase [Escherichia coli E128010]
gi|415832528|ref|ZP_11517955.1| protein-P-II uridylyltransferase [Escherichia coli OK1357]
gi|415864366|ref|ZP_11537460.1| protein-P-II uridylyltransferase [Escherichia coli MS 85-1]
gi|415877377|ref|ZP_11543554.1| protein-P-II uridylyltransferase [Escherichia coli MS 79-10]
gi|416274879|ref|ZP_11643840.1| PII uridylyl-transferase [Shigella dysenteriae CDC 74-1112]
gi|416294321|ref|ZP_11650806.1| PII uridylyl-transferase [Shigella flexneri CDC 796-83]
gi|416342928|ref|ZP_11676932.1| PII uridylyl-transferase [Escherichia coli EC4100B]
gi|417134649|ref|ZP_11979434.1| protein-P-II uridylyltransferase [Escherichia coli 5.0588]
gi|417151596|ref|ZP_11991123.1| protein-P-II uridylyltransferase [Escherichia coli 1.2264]
gi|417152570|ref|ZP_11991361.1| protein-P-II uridylyltransferase [Escherichia coli 96.0497]
gi|417168471|ref|ZP_12000922.1| protein-P-II uridylyltransferase [Escherichia coli 99.0741]
gi|417174527|ref|ZP_12004323.1| protein-P-II uridylyltransferase [Escherichia coli 3.2608]
gi|417181828|ref|ZP_12008664.1| protein-P-II uridylyltransferase [Escherichia coli 93.0624]
gi|417244406|ref|ZP_12038416.1| protein-P-II uridylyltransferase [Escherichia coli 9.0111]
gi|417252574|ref|ZP_12044333.1| protein-P-II uridylyltransferase [Escherichia coli 4.0967]
gi|417273890|ref|ZP_12061235.1| protein-P-II uridylyltransferase [Escherichia coli 2.4168]
gi|417579384|ref|ZP_12230210.1| protein-P-II uridylyltransferase [Escherichia coli STEC_B2F1]
gi|417595014|ref|ZP_12245690.1| protein-P-II uridylyltransferase [Escherichia coli 3030-1]
gi|417606095|ref|ZP_12256628.1| protein-P-II uridylyltransferase [Escherichia coli STEC_DG131-3]
gi|417621396|ref|ZP_12271727.1| protein-P-II uridylyltransferase [Escherichia coli STEC_H.1.8]
gi|417637433|ref|ZP_12287614.1| protein-P-II uridylyltransferase [Escherichia coli TX1999]
gi|417665235|ref|ZP_12314804.1| protein-P-II uridylyltransferase [Escherichia coli STEC_O31]
gi|417680443|ref|ZP_12329830.1| protein-P-II uridylyltransferase [Shigella boydii 3594-74]
gi|417803508|ref|ZP_12450548.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. LB226692]
gi|417831269|ref|ZP_12477797.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 01-09591]
gi|417864311|ref|ZP_12509357.1| glnD [Escherichia coli O104:H4 str. C227-11]
gi|419168136|ref|ZP_13712537.1| protein-P-II uridylyltransferase [Escherichia coli DEC7A]
gi|419179187|ref|ZP_13722814.1| protein-P-II uridylyltransferase [Escherichia coli DEC7C]
gi|419184646|ref|ZP_13728172.1| protein-P-II uridylyltransferase [Escherichia coli DEC7D]
gi|419189914|ref|ZP_13733387.1| protein-P-II uridylyltransferase [Escherichia coli DEC7E]
gi|419276270|ref|ZP_13818542.1| protein-P-II uridylyltransferase [Escherichia coli DEC10E]
gi|419287677|ref|ZP_13829796.1| protein-P-II uridylyltransferase [Escherichia coli DEC11A]
gi|419292975|ref|ZP_13835037.1| protein-P-II uridylyltransferase [Escherichia coli DEC11B]
gi|419304672|ref|ZP_13846589.1| protein-P-II uridylyltransferase [Escherichia coli DEC11D]
gi|419309707|ref|ZP_13851586.1| protein-P-II uridylyltransferase [Escherichia coli DEC11E]
gi|419315010|ref|ZP_13856843.1| protein-P-II uridylyltransferase [Escherichia coli DEC12A]
gi|419320807|ref|ZP_13862552.1| protein-P-II uridylyltransferase [Escherichia coli DEC12B]
gi|419327009|ref|ZP_13868646.1| protein-P-II uridylyltransferase [Escherichia coli DEC12C]
gi|419332426|ref|ZP_13873993.1| protein-P-II uridylyltransferase [Escherichia coli DEC12D]
gi|419338178|ref|ZP_13879669.1| protein-P-II uridylyltransferase [Escherichia coli DEC12E]
gi|419343833|ref|ZP_13885219.1| protein-P-II uridylyltransferase [Escherichia coli DEC13A]
gi|419348254|ref|ZP_13889609.1| protein-P-II uridylyltransferase [Escherichia coli DEC13B]
gi|419353157|ref|ZP_13894445.1| protein-P-II uridylyltransferase [Escherichia coli DEC13C]
gi|419358502|ref|ZP_13899734.1| protein-P-II uridylyltransferase [Escherichia coli DEC13D]
gi|419363522|ref|ZP_13904706.1| protein-P-II uridylyltransferase [Escherichia coli DEC13E]
gi|419368445|ref|ZP_13909579.1| protein-P-II uridylyltransferase [Escherichia coli DEC14A]
gi|419373603|ref|ZP_13914665.1| protein-P-II uridylyltransferase [Escherichia coli DEC14B]
gi|419379028|ref|ZP_13920011.1| protein-P-II uridylyltransferase [Escherichia coli DEC14C]
gi|419384286|ref|ZP_13925194.1| protein-P-II uridylyltransferase [Escherichia coli DEC14D]
gi|419389581|ref|ZP_13930424.1| protein-P-II uridylyltransferase [Escherichia coli DEC15A]
gi|419394753|ref|ZP_13935541.1| protein-P-II uridylyltransferase [Escherichia coli DEC15B]
gi|419400145|ref|ZP_13940880.1| protein-P-II uridylyltransferase [Escherichia coli DEC15C]
gi|419410476|ref|ZP_13951155.1| protein-P-II uridylyltransferase [Escherichia coli DEC15D]
gi|419410794|ref|ZP_13951471.1| protein-P-II uridylyltransferase [Escherichia coli DEC15E]
gi|419804906|ref|ZP_14330055.1| protein-P-II uridylyltransferase [Escherichia coli AI27]
gi|419865209|ref|ZP_14387598.1| PII uridylyl-transferase [Escherichia coli O103:H25 str. CVM9340]
gi|419870122|ref|ZP_14392259.1| PII uridylyl-transferase [Escherichia coli O103:H2 str. CVM9450]
gi|419951487|ref|ZP_14467678.1| PII uridylyl-transferase [Escherichia coli CUMT8]
gi|420323822|ref|ZP_14825612.1| protein-P-II uridylyltransferase [Shigella flexneri CCH060]
gi|420334427|ref|ZP_14836050.1| protein-P-II uridylyltransferase [Shigella flexneri K-315]
gi|420351040|ref|ZP_14852243.1| protein-P-II uridylyltransferase [Shigella boydii 4444-74]
gi|420383805|ref|ZP_14883197.1| protein-P-II uridylyltransferase [Escherichia coli EPECa12]
gi|420389496|ref|ZP_14888770.1| protein-P-II uridylyltransferase [Escherichia coli EPEC C342-62]
gi|421680885|ref|ZP_16120727.1| protein-P-II uridylyltransferase [Shigella flexneri 1485-80]
gi|422354200|ref|ZP_16434942.1| protein-P-II uridylyltransferase [Escherichia coli MS 117-3]
gi|422761843|ref|ZP_16815601.1| protein-P-II uridylyltransferase [Escherichia coli E1167]
gi|422957493|ref|ZP_16969707.1| [protein-PII] uridylyltransferase [Escherichia coli H494]
gi|422990869|ref|ZP_16981640.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|422992809|ref|ZP_16983573.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|422998018|ref|ZP_16988774.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|423006502|ref|ZP_16997246.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|423008124|ref|ZP_16998862.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|423022310|ref|ZP_17013013.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|423027465|ref|ZP_17018158.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|423033302|ref|ZP_17023986.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|423036168|ref|ZP_17026842.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041288|ref|ZP_17031955.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047974|ref|ZP_17038631.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423056512|ref|ZP_17045317.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058523|ref|ZP_17047319.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|425420765|ref|ZP_18802009.1| protein-P-II uridylyltransferase [Escherichia coli 0.1288]
gi|427803239|ref|ZP_18970306.1| protein PII [Escherichia coli chi7122]
gi|427807844|ref|ZP_18974909.1| protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli]
gi|429722367|ref|ZP_19257266.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774445|ref|ZP_19306449.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429779705|ref|ZP_19311661.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783760|ref|ZP_19315674.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429789098|ref|ZP_19320974.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429795328|ref|ZP_19327155.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429801254|ref|ZP_19333033.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429804886|ref|ZP_19336634.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429809697|ref|ZP_19341400.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429815457|ref|ZP_19347117.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429820668|ref|ZP_19352283.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429906719|ref|ZP_19372689.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910914|ref|ZP_19376871.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916754|ref|ZP_19382695.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921792|ref|ZP_19387714.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927609|ref|ZP_19393516.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931542|ref|ZP_19397438.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429938085|ref|ZP_19403966.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429938800|ref|ZP_19404674.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946441|ref|ZP_19412297.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949089|ref|ZP_19414937.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957356|ref|ZP_19423185.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432479490|ref|ZP_19721456.1| [protein-PII] uridylyltransferase [Escherichia coli KTE210]
gi|432808799|ref|ZP_20042709.1| [protein-PII] uridylyltransferase [Escherichia coli KTE91]
gi|432812316|ref|ZP_20046166.1| [protein-PII] uridylyltransferase [Escherichia coli KTE101]
gi|432830141|ref|ZP_20063751.1| [protein-PII] uridylyltransferase [Escherichia coli KTE135]
gi|432856975|ref|ZP_20084226.1| [protein-PII] uridylyltransferase [Escherichia coli KTE144]
gi|432932426|ref|ZP_20132328.1| [protein-PII] uridylyltransferase [Escherichia coli KTE184]
gi|432966307|ref|ZP_20155227.1| [protein-PII] uridylyltransferase [Escherichia coli KTE203]
gi|433128453|ref|ZP_20313941.1| [protein-PII] uridylyltransferase [Escherichia coli KTE163]
gi|433133354|ref|ZP_20318740.1| [protein-PII] uridylyltransferase [Escherichia coli KTE166]
gi|433191955|ref|ZP_20375988.1| [protein-PII] uridylyltransferase [Escherichia coli KTE90]
gi|443616178|ref|YP_007380034.1| PII uridylyl-transferase [Escherichia coli APEC O78]
gi|450209540|ref|ZP_21893955.1| PII uridylyl-transferase [Escherichia coli O08]
gi|91206755|sp|Q325X3.1|GLND_SHIBS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990443|sp|A7ZWB3.1|GLND_ECOHS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|226723942|sp|B7M1A6.1|GLND_ECO8A RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238057816|sp|B6HZE1.1|GLND_ECOSE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798832|sp|B7LGM7.1|GLND_ECO55 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81244177|gb|ABB64885.1| protein PII [Shigella boydii Sb227]
gi|157065312|gb|ABV04567.1| protein-P-II uridylyltransferase [Escherichia coli HS]
gi|190903577|gb|EDV63294.1| protein-P-II uridylyltransferase [Escherichia coli B7A]
gi|192931092|gb|EDV83695.1| protein-P-II uridylyltransferase [Escherichia coli E22]
gi|194413644|gb|EDX29924.1| protein-P-II uridylyltransferase [Escherichia coli B171]
gi|209910616|dbj|BAG75690.1| uridylyltransferase [Escherichia coli SE11]
gi|218350363|emb|CAU96046.1| uridylyltransferase [Escherichia coli 55989]
gi|218359514|emb|CAQ97052.1| uridylyltransferase [Escherichia coli IAI1]
gi|257757546|dbj|BAI29043.1| uridylyltransferase [Escherichia coli O103:H2 str. 12009]
gi|291321277|gb|EFE60719.1| protein-P-II uridylyltransferase [Escherichia coli B088]
gi|291430771|gb|EFF03769.1| P-II uridylyltransferase [Escherichia coli B185]
gi|300405872|gb|EFJ89410.1| protein-P-II uridylyltransferase [Escherichia coli MS 84-1]
gi|300420668|gb|EFK03979.1| protein-P-II uridylyltransferase [Escherichia coli MS 182-1]
gi|300531414|gb|EFK52476.1| protein-P-II uridylyltransferase [Escherichia coli MS 107-1]
gi|300839408|gb|EFK67168.1| protein-P-II uridylyltransferase [Escherichia coli MS 124-1]
gi|300843946|gb|EFK71706.1| protein-P-II uridylyltransferase [Escherichia coli MS 78-1]
gi|308120048|gb|EFO57310.1| protein-P-II uridylyltransferase [Escherichia coli MS 145-7]
gi|315254969|gb|EFU34937.1| protein-P-II uridylyltransferase [Escherichia coli MS 85-1]
gi|320173353|gb|EFW48556.1| PII uridylyl-transferase [Shigella dysenteriae CDC 74-1112]
gi|320186587|gb|EFW61312.1| PII uridylyl-transferase [Shigella flexneri CDC 796-83]
gi|320200309|gb|EFW74895.1| PII uridylyl-transferase [Escherichia coli EC4100B]
gi|323160215|gb|EFZ46174.1| protein-P-II uridylyltransferase [Escherichia coli E128010]
gi|323181673|gb|EFZ67087.1| protein-P-II uridylyltransferase [Escherichia coli OK1357]
gi|324017826|gb|EGB87045.1| protein-P-II uridylyltransferase [Escherichia coli MS 117-3]
gi|324118286|gb|EGC12181.1| protein-P-II uridylyltransferase [Escherichia coli E1167]
gi|331051526|gb|EGI23575.1| protein-P-II uridylyltransferase [Escherichia coli M718]
gi|332098788|gb|EGJ03748.1| protein-P-II uridylyltransferase [Shigella boydii 3594-74]
gi|332105193|gb|EGJ08539.1| uridylyltransferase [Shigella sp. D9]
gi|340736138|gb|EGR65188.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 01-09591]
gi|340742054|gb|EGR76195.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. LB226692]
gi|341917600|gb|EGT67215.1| glnD [Escherichia coli O104:H4 str. C227-11]
gi|342928012|gb|EGU96734.1| protein-P-II uridylyltransferase [Escherichia coli MS 79-10]
gi|345344682|gb|EGW77047.1| protein-P-II uridylyltransferase [Escherichia coli STEC_B2F1]
gi|345363226|gb|EGW95369.1| protein-P-II uridylyltransferase [Escherichia coli 3030-1]
gi|345366263|gb|EGW98355.1| protein-P-II uridylyltransferase [Escherichia coli STEC_DG131-3]
gi|345387158|gb|EGX16986.1| protein-P-II uridylyltransferase [Escherichia coli STEC_H.1.8]
gi|345395753|gb|EGX25491.1| protein-P-II uridylyltransferase [Escherichia coli TX1999]
gi|354859368|gb|EHF19816.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|354859855|gb|EHF20302.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|354866552|gb|EHF26975.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|354876886|gb|EHF37246.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|354881895|gb|EHF42223.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|354884993|gb|EHF45304.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|354886440|gb|EHF46727.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|354889956|gb|EHF50203.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|354902156|gb|EHF62278.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905482|gb|EHF65565.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354907989|gb|EHF68045.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354910260|gb|EHF70288.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354918461|gb|EHF78417.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|371598110|gb|EHN86924.1| [protein-PII] uridylyltransferase [Escherichia coli H494]
gi|378019418|gb|EHV82249.1| protein-P-II uridylyltransferase [Escherichia coli DEC7A]
gi|378028734|gb|EHV91351.1| protein-P-II uridylyltransferase [Escherichia coli DEC7C]
gi|378034273|gb|EHV96839.1| protein-P-II uridylyltransferase [Escherichia coli DEC7D]
gi|378043362|gb|EHW05798.1| protein-P-II uridylyltransferase [Escherichia coli DEC7E]
gi|378134831|gb|EHW96146.1| protein-P-II uridylyltransferase [Escherichia coli DEC10E]
gi|378136644|gb|EHW97935.1| protein-P-II uridylyltransferase [Escherichia coli DEC11A]
gi|378147747|gb|EHX08893.1| protein-P-II uridylyltransferase [Escherichia coli DEC11B]
gi|378154326|gb|EHX15402.1| protein-P-II uridylyltransferase [Escherichia coli DEC11D]
gi|378161916|gb|EHX22885.1| protein-P-II uridylyltransferase [Escherichia coli DEC11E]
gi|378176010|gb|EHX36818.1| protein-P-II uridylyltransferase [Escherichia coli DEC12B]
gi|378176507|gb|EHX37313.1| protein-P-II uridylyltransferase [Escherichia coli DEC12A]
gi|378177547|gb|EHX38338.1| protein-P-II uridylyltransferase [Escherichia coli DEC12C]
gi|378190837|gb|EHX51415.1| protein-P-II uridylyltransferase [Escherichia coli DEC13A]
gi|378192309|gb|EHX52872.1| protein-P-II uridylyltransferase [Escherichia coli DEC12D]
gi|378193927|gb|EHX54450.1| protein-P-II uridylyltransferase [Escherichia coli DEC12E]
gi|378205645|gb|EHX66055.1| protein-P-II uridylyltransferase [Escherichia coli DEC13B]
gi|378208604|gb|EHX68985.1| protein-P-II uridylyltransferase [Escherichia coli DEC13D]
gi|378209586|gb|EHX69955.1| protein-P-II uridylyltransferase [Escherichia coli DEC13C]
gi|378220379|gb|EHX80640.1| protein-P-II uridylyltransferase [Escherichia coli DEC13E]
gi|378223387|gb|EHX83611.1| protein-P-II uridylyltransferase [Escherichia coli DEC14A]
gi|378227565|gb|EHX87735.1| protein-P-II uridylyltransferase [Escherichia coli DEC14B]
gi|378235053|gb|EHX95126.1| protein-P-II uridylyltransferase [Escherichia coli DEC14C]
gi|378237817|gb|EHX97835.1| protein-P-II uridylyltransferase [Escherichia coli DEC14D]
gi|378246188|gb|EHY06120.1| protein-P-II uridylyltransferase [Escherichia coli DEC15A]
gi|378249941|gb|EHY09850.1| protein-P-II uridylyltransferase [Escherichia coli DEC15D]
gi|378252378|gb|EHY12269.1| protein-P-II uridylyltransferase [Escherichia coli DEC15C]
gi|378252436|gb|EHY12326.1| protein-P-II uridylyltransferase [Escherichia coli DEC15B]
gi|378261804|gb|EHY21595.1| protein-P-II uridylyltransferase [Escherichia coli DEC15E]
gi|384472082|gb|EIE56144.1| protein-P-II uridylyltransferase [Escherichia coli AI27]
gi|386152503|gb|EIH03792.1| protein-P-II uridylyltransferase [Escherichia coli 5.0588]
gi|386159787|gb|EIH21601.1| protein-P-II uridylyltransferase [Escherichia coli 1.2264]
gi|386169294|gb|EIH35802.1| protein-P-II uridylyltransferase [Escherichia coli 96.0497]
gi|386170519|gb|EIH42572.1| protein-P-II uridylyltransferase [Escherichia coli 99.0741]
gi|386177219|gb|EIH54698.1| protein-P-II uridylyltransferase [Escherichia coli 3.2608]
gi|386184817|gb|EIH67553.1| protein-P-II uridylyltransferase [Escherichia coli 93.0624]
gi|386211071|gb|EII21541.1| protein-P-II uridylyltransferase [Escherichia coli 9.0111]
gi|386216505|gb|EII32994.1| protein-P-II uridylyltransferase [Escherichia coli 4.0967]
gi|386234072|gb|EII66052.1| protein-P-II uridylyltransferase [Escherichia coli 2.4168]
gi|388338103|gb|EIL04580.1| PII uridylyl-transferase [Escherichia coli O103:H25 str. CVM9340]
gi|388340278|gb|EIL06525.1| PII uridylyl-transferase [Escherichia coli O103:H2 str. CVM9450]
gi|388414448|gb|EIL74405.1| PII uridylyl-transferase [Escherichia coli CUMT8]
gi|391257697|gb|EIQ16807.1| protein-P-II uridylyltransferase [Shigella flexneri CCH060]
gi|391268604|gb|EIQ27529.1| protein-P-II uridylyltransferase [Shigella flexneri K-315]
gi|391289874|gb|EIQ48358.1| protein-P-II uridylyltransferase [Shigella boydii 4444-74]
gi|391310154|gb|EIQ67810.1| protein-P-II uridylyltransferase [Escherichia coli EPECa12]
gi|391315729|gb|EIQ73253.1| protein-P-II uridylyltransferase [Escherichia coli EPEC C342-62]
gi|397787170|gb|EJK97999.1| protein-P-II uridylyltransferase [Escherichia coli STEC_O31]
gi|404342120|gb|EJZ68510.1| protein-P-II uridylyltransferase [Shigella flexneri 1485-80]
gi|406779364|gb|AFS58788.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055959|gb|AFS76010.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063656|gb|AFS84703.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408348565|gb|EKJ62661.1| protein-P-II uridylyltransferase [Escherichia coli 0.1288]
gi|412961421|emb|CCK45326.1| protein PII [Escherichia coli chi7122]
gi|412968023|emb|CCJ42636.1| protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli]
gi|429352495|gb|EKY89210.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429353551|gb|EKY90259.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354049|gb|EKY90754.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429367539|gb|EKZ04133.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429368691|gb|EKZ05277.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429370917|gb|EKZ07480.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429383291|gb|EKZ19752.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429386140|gb|EKZ22590.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429387053|gb|EKZ23498.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429398313|gb|EKZ34656.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429400029|gb|EKZ36347.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429400363|gb|EKZ36680.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429411454|gb|EKZ47664.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429413026|gb|EKZ49216.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429420078|gb|EKZ56212.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429423940|gb|EKZ60047.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429430097|gb|EKZ66164.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429436039|gb|EKZ72056.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443223|gb|EKZ79176.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429445645|gb|EKZ81586.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429452114|gb|EKZ88001.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456965|gb|EKZ92808.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|431011628|gb|ELD25703.1| [protein-PII] uridylyltransferase [Escherichia coli KTE210]
gi|431352022|gb|ELG38808.1| [protein-PII] uridylyltransferase [Escherichia coli KTE91]
gi|431358419|gb|ELG45077.1| [protein-PII] uridylyltransferase [Escherichia coli KTE101]
gi|431380806|gb|ELG65445.1| [protein-PII] uridylyltransferase [Escherichia coli KTE135]
gi|431395483|gb|ELG78995.1| [protein-PII] uridylyltransferase [Escherichia coli KTE144]
gi|431457436|gb|ELH37775.1| [protein-PII] uridylyltransferase [Escherichia coli KTE184]
gi|431475668|gb|ELH55472.1| [protein-PII] uridylyltransferase [Escherichia coli KTE203]
gi|431652347|gb|ELJ19501.1| [protein-PII] uridylyltransferase [Escherichia coli KTE163]
gi|431663924|gb|ELJ30676.1| [protein-PII] uridylyltransferase [Escherichia coli KTE166]
gi|431723777|gb|ELJ87722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE90]
gi|443420686|gb|AGC85590.1| PII uridylyl-transferase [Escherichia coli APEC O78]
gi|449323625|gb|EMD13578.1| PII uridylyl-transferase [Escherichia coli O08]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422830331|ref|ZP_16878490.1| uridylyltransferase [Escherichia coli B093]
gi|371605323|gb|EHN93940.1| uridylyltransferase [Escherichia coli B093]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|415814269|ref|ZP_11505889.1| protein-P-II uridylyltransferase [Escherichia coli LT-68]
gi|323170957|gb|EFZ56606.1| protein-P-II uridylyltransferase [Escherichia coli LT-68]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|91209236|ref|YP_539222.1| PII uridylyl-transferase [Escherichia coli UTI89]
gi|117622452|ref|YP_851365.1| PII uridylyl-transferase [Escherichia coli APEC O1]
gi|218557108|ref|YP_002390021.1| PII uridylyl-transferase [Escherichia coli S88]
gi|237704326|ref|ZP_04534807.1| uridylyltransferase [Escherichia sp. 3_2_53FAA]
gi|386597917|ref|YP_006099423.1| protein-P-II uridylyltransferase [Escherichia coli IHE3034]
gi|386607259|ref|YP_006113559.1| PII uridylyl-transferase [Escherichia coli UM146]
gi|417082474|ref|ZP_11950808.1| PII uridylyl-transferase [Escherichia coli cloneA_i1]
gi|419942398|ref|ZP_14459001.1| PII uridylyl-transferase [Escherichia coli HM605]
gi|422360935|ref|ZP_16441563.1| protein-P-II uridylyltransferase [Escherichia coli MS 110-3]
gi|422750443|ref|ZP_16804353.1| protein-P-II uridylyltransferase [Escherichia coli H252]
gi|422756508|ref|ZP_16810331.1| protein-P-II uridylyltransferase [Escherichia coli H263]
gi|422839832|ref|ZP_16887803.1| uridylyltransferase [Escherichia coli H397]
gi|432356526|ref|ZP_19599774.1| [protein-PII] uridylyltransferase [Escherichia coli KTE4]
gi|432366024|ref|ZP_19609159.1| [protein-PII] uridylyltransferase [Escherichia coli KTE5]
gi|432572060|ref|ZP_19808554.1| [protein-PII] uridylyltransferase [Escherichia coli KTE55]
gi|432586496|ref|ZP_19822869.1| [protein-PII] uridylyltransferase [Escherichia coli KTE58]
gi|432596065|ref|ZP_19832355.1| [protein-PII] uridylyltransferase [Escherichia coli KTE62]
gi|432757681|ref|ZP_19992215.1| [protein-PII] uridylyltransferase [Escherichia coli KTE22]
gi|432790750|ref|ZP_20024871.1| [protein-PII] uridylyltransferase [Escherichia coli KTE65]
gi|432819517|ref|ZP_20053232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE118]
gi|433003708|ref|ZP_20192147.1| [protein-PII] uridylyltransferase [Escherichia coli KTE227]
gi|433010915|ref|ZP_20199320.1| [protein-PII] uridylyltransferase [Escherichia coli KTE229]
gi|433152302|ref|ZP_20337276.1| [protein-PII] uridylyltransferase [Escherichia coli KTE176]
gi|433161948|ref|ZP_20346718.1| [protein-PII] uridylyltransferase [Escherichia coli KTE179]
gi|433166883|ref|ZP_20351569.1| [protein-PII] uridylyltransferase [Escherichia coli KTE180]
gi|122424959|sp|Q1RG23.1|GLND_ECOUT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166226149|sp|A1A7L1.1|GLND_ECOK1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|226723940|sp|B7MBE8.1|GLND_ECO45 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91070810|gb|ABE05691.1| [protein-PII] uridylyltransferase [Escherichia coli UTI89]
gi|115511576|gb|ABI99650.1| PII uridylyl-transferase [Escherichia coli APEC O1]
gi|218363877|emb|CAR01541.1| uridylyltransferase [Escherichia coli S88]
gi|226902238|gb|EEH88497.1| uridylyltransferase [Escherichia sp. 3_2_53FAA]
gi|294490561|gb|ADE89317.1| protein-P-II uridylyltransferase [Escherichia coli IHE3034]
gi|307629743|gb|ADN74047.1| PII uridylyl-transferase [Escherichia coli UM146]
gi|315285236|gb|EFU44681.1| protein-P-II uridylyltransferase [Escherichia coli MS 110-3]
gi|323950834|gb|EGB46711.1| protein-P-II uridylyltransferase [Escherichia coli H252]
gi|323955128|gb|EGB50903.1| protein-P-II uridylyltransferase [Escherichia coli H263]
gi|355353444|gb|EHG02611.1| PII uridylyl-transferase [Escherichia coli cloneA_i1]
gi|371608316|gb|EHN96872.1| uridylyltransferase [Escherichia coli H397]
gi|388422960|gb|EIL82509.1| PII uridylyl-transferase [Escherichia coli HM605]
gi|430880117|gb|ELC03438.1| [protein-PII] uridylyltransferase [Escherichia coli KTE4]
gi|430881131|gb|ELC04393.1| [protein-PII] uridylyltransferase [Escherichia coli KTE5]
gi|431111787|gb|ELE15678.1| [protein-PII] uridylyltransferase [Escherichia coli KTE55]
gi|431124397|gb|ELE27043.1| [protein-PII] uridylyltransferase [Escherichia coli KTE58]
gi|431134661|gb|ELE36610.1| [protein-PII] uridylyltransferase [Escherichia coli KTE62]
gi|431297582|gb|ELF87232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE22]
gi|431333762|gb|ELG20947.1| [protein-PII] uridylyltransferase [Escherichia coli KTE65]
gi|431371276|gb|ELG57061.1| [protein-PII] uridylyltransferase [Escherichia coli KTE118]
gi|431518659|gb|ELH96113.1| [protein-PII] uridylyltransferase [Escherichia coli KTE227]
gi|431519127|gb|ELH96579.1| [protein-PII] uridylyltransferase [Escherichia coli KTE229]
gi|431679116|gb|ELJ45032.1| [protein-PII] uridylyltransferase [Escherichia coli KTE176]
gi|431693339|gb|ELJ58755.1| [protein-PII] uridylyltransferase [Escherichia coli KTE179]
gi|431695148|gb|ELJ60484.1| [protein-PII] uridylyltransferase [Escherichia coli KTE180]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|188492984|ref|ZP_03000254.1| protein-P-II uridylyltransferase [Escherichia coli 53638]
gi|404373478|ref|ZP_10978741.1| [protein-PII] uridylyltransferase [Escherichia sp. 1_1_43]
gi|432368158|ref|ZP_19611266.1| [protein-PII] uridylyltransferase [Escherichia coli KTE10]
gi|432483808|ref|ZP_19725737.1| [protein-PII] uridylyltransferase [Escherichia coli KTE212]
gi|432668988|ref|ZP_19904543.1| [protein-PII] uridylyltransferase [Escherichia coli KTE119]
gi|432879422|ref|ZP_20096449.1| [protein-PII] uridylyltransferase [Escherichia coli KTE154]
gi|433171932|ref|ZP_20356502.1| [protein-PII] uridylyltransferase [Escherichia coli KTE232]
gi|188488183|gb|EDU63286.1| protein-P-II uridylyltransferase [Escherichia coli 53638]
gi|226840692|gb|EEH72694.1| [protein-PII] uridylyltransferase [Escherichia sp. 1_1_43]
gi|430889819|gb|ELC12479.1| [protein-PII] uridylyltransferase [Escherichia coli KTE10]
gi|431020033|gb|ELD33424.1| [protein-PII] uridylyltransferase [Escherichia coli KTE212]
gi|431214693|gb|ELF12447.1| [protein-PII] uridylyltransferase [Escherichia coli KTE119]
gi|431415220|gb|ELG97770.1| [protein-PII] uridylyltransferase [Escherichia coli KTE154]
gi|431697236|gb|ELJ62381.1| [protein-PII] uridylyltransferase [Escherichia coli KTE232]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|110640386|ref|YP_668114.1| PII uridylyl-transferase [Escherichia coli 536]
gi|191172779|ref|ZP_03034316.1| protein-P-II uridylyltransferase [Escherichia coli F11]
gi|300984846|ref|ZP_07177135.1| protein-P-II uridylyltransferase [Escherichia coli MS 200-1]
gi|386617672|ref|YP_006137252.1| Uridylyltransferase [Escherichia coli NA114]
gi|387828235|ref|YP_003348172.1| uridylyltransferase [Escherichia coli SE15]
gi|417287717|ref|ZP_12075003.1| protein-P-II uridylyltransferase [Escherichia coli TW07793]
gi|419912658|ref|ZP_14431106.1| PII uridylyl-transferase [Escherichia coli KD1]
gi|422376522|ref|ZP_16456773.1| protein-P-II uridylyltransferase [Escherichia coli MS 60-1]
gi|432396021|ref|ZP_19638814.1| [protein-PII] uridylyltransferase [Escherichia coli KTE25]
gi|432405054|ref|ZP_19647778.1| [protein-PII] uridylyltransferase [Escherichia coli KTE28]
gi|432420290|ref|ZP_19662849.1| [protein-PII] uridylyltransferase [Escherichia coli KTE178]
gi|432469088|ref|ZP_19711151.1| [protein-PII] uridylyltransferase [Escherichia coli KTE205]
gi|432469499|ref|ZP_19711555.1| [protein-PII] uridylyltransferase [Escherichia coli KTE206]
gi|432498466|ref|ZP_19740247.1| [protein-PII] uridylyltransferase [Escherichia coli KTE216]
gi|432557197|ref|ZP_19793891.1| [protein-PII] uridylyltransferase [Escherichia coli KTE49]
gi|432581359|ref|ZP_19817777.1| [protein-PII] uridylyltransferase [Escherichia coli KTE57]
gi|432692854|ref|ZP_19928074.1| [protein-PII] uridylyltransferase [Escherichia coli KTE162]
gi|432709012|ref|ZP_19944081.1| [protein-PII] uridylyltransferase [Escherichia coli KTE6]
gi|432721767|ref|ZP_19956696.1| [protein-PII] uridylyltransferase [Escherichia coli KTE17]
gi|432726177|ref|ZP_19961066.1| [protein-PII] uridylyltransferase [Escherichia coli KTE18]
gi|432730888|ref|ZP_19965749.1| [protein-PII] uridylyltransferase [Escherichia coli KTE45]
gi|432739945|ref|ZP_19974668.1| [protein-PII] uridylyltransferase [Escherichia coli KTE23]
gi|432762439|ref|ZP_19996903.1| [protein-PII] uridylyltransferase [Escherichia coli KTE46]
gi|432800494|ref|ZP_20034485.1| [protein-PII] uridylyltransferase [Escherichia coli KTE84]
gi|432892742|ref|ZP_20104909.1| [protein-PII] uridylyltransferase [Escherichia coli KTE165]
gi|432917154|ref|ZP_20121825.1| [protein-PII] uridylyltransferase [Escherichia coli KTE173]
gi|432924449|ref|ZP_20126736.1| [protein-PII] uridylyltransferase [Escherichia coli KTE175]
gi|432979554|ref|ZP_20168342.1| [protein-PII] uridylyltransferase [Escherichia coli KTE211]
gi|432989111|ref|ZP_20177784.1| [protein-PII] uridylyltransferase [Escherichia coli KTE217]
gi|433071078|ref|ZP_20257795.1| [protein-PII] uridylyltransferase [Escherichia coli KTE129]
gi|433076325|ref|ZP_20262905.1| [protein-PII] uridylyltransferase [Escherichia coli KTE131]
gi|433095047|ref|ZP_20281273.1| [protein-PII] uridylyltransferase [Escherichia coli KTE139]
gi|433104350|ref|ZP_20290375.1| [protein-PII] uridylyltransferase [Escherichia coli KTE148]
gi|433109346|ref|ZP_20295230.1| [protein-PII] uridylyltransferase [Escherichia coli KTE150]
gi|433118644|ref|ZP_20304367.1| [protein-PII] uridylyltransferase [Escherichia coli KTE157]
gi|433181608|ref|ZP_20365920.1| [protein-PII] uridylyltransferase [Escherichia coli KTE85]
gi|123148412|sp|Q0TLG6.1|GLND_ECOL5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|110341978|gb|ABG68215.1| [protein-PII] uridylyltransferase [Escherichia coli 536]
gi|190906929|gb|EDV66531.1| protein-P-II uridylyltransferase [Escherichia coli F11]
gi|281177392|dbj|BAI53722.1| uridylyltransferase [Escherichia coli SE15]
gi|300306607|gb|EFJ61127.1| protein-P-II uridylyltransferase [Escherichia coli MS 200-1]
gi|324012180|gb|EGB81399.1| protein-P-II uridylyltransferase [Escherichia coli MS 60-1]
gi|333968173|gb|AEG34978.1| Uridylyltransferase [Escherichia coli NA114]
gi|386248502|gb|EII94674.1| protein-P-II uridylyltransferase [Escherichia coli TW07793]
gi|388391192|gb|EIL52665.1| PII uridylyl-transferase [Escherichia coli KD1]
gi|430919043|gb|ELC39994.1| [protein-PII] uridylyltransferase [Escherichia coli KTE25]
gi|430933279|gb|ELC53690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE28]
gi|430947878|gb|ELC67566.1| [protein-PII] uridylyltransferase [Escherichia coli KTE178]
gi|430988222|gb|ELD04722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE205]
gi|431001477|gb|ELD17060.1| [protein-PII] uridylyltransferase [Escherichia coli KTE206]
gi|431032911|gb|ELD45617.1| [protein-PII] uridylyltransferase [Escherichia coli KTE216]
gi|431094815|gb|ELE00444.1| [protein-PII] uridylyltransferase [Escherichia coli KTE49]
gi|431123119|gb|ELE25862.1| [protein-PII] uridylyltransferase [Escherichia coli KTE57]
gi|431237874|gb|ELF32856.1| [protein-PII] uridylyltransferase [Escherichia coli KTE162]
gi|431252733|gb|ELF46247.1| [protein-PII] uridylyltransferase [Escherichia coli KTE6]
gi|431268980|gb|ELF60341.1| [protein-PII] uridylyltransferase [Escherichia coli KTE17]
gi|431277425|gb|ELF68439.1| [protein-PII] uridylyltransferase [Escherichia coli KTE18]
gi|431278902|gb|ELF69875.1| [protein-PII] uridylyltransferase [Escherichia coli KTE45]
gi|431287317|gb|ELF78135.1| [protein-PII] uridylyltransferase [Escherichia coli KTE23]
gi|431302391|gb|ELF91577.1| [protein-PII] uridylyltransferase [Escherichia coli KTE46]
gi|431351390|gb|ELG38177.1| [protein-PII] uridylyltransferase [Escherichia coli KTE84]
gi|431426163|gb|ELH08208.1| [protein-PII] uridylyltransferase [Escherichia coli KTE165]
gi|431448439|gb|ELH29156.1| [protein-PII] uridylyltransferase [Escherichia coli KTE173]
gi|431450090|gb|ELH30582.1| [protein-PII] uridylyltransferase [Escherichia coli KTE175]
gi|431498504|gb|ELH77690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE211]
gi|431500011|gb|ELH79028.1| [protein-PII] uridylyltransferase [Escherichia coli KTE217]
gi|431595627|gb|ELI65620.1| [protein-PII] uridylyltransferase [Escherichia coli KTE129]
gi|431603319|gb|ELI72745.1| [protein-PII] uridylyltransferase [Escherichia coli KTE131]
gi|431620785|gb|ELI89612.1| [protein-PII] uridylyltransferase [Escherichia coli KTE139]
gi|431633508|gb|ELJ01788.1| [protein-PII] uridylyltransferase [Escherichia coli KTE150]
gi|431634794|gb|ELJ03015.1| [protein-PII] uridylyltransferase [Escherichia coli KTE148]
gi|431650467|gb|ELJ17788.1| [protein-PII] uridylyltransferase [Escherichia coli KTE157]
gi|431712755|gb|ELJ77033.1| [protein-PII] uridylyltransferase [Escherichia coli KTE85]
Length = 890
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432777050|ref|ZP_20011306.1| [protein-PII] uridylyltransferase [Escherichia coli KTE59]
gi|432825646|ref|ZP_20059303.1| [protein-PII] uridylyltransferase [Escherichia coli KTE123]
gi|431331684|gb|ELG18930.1| [protein-PII] uridylyltransferase [Escherichia coli KTE59]
gi|431375030|gb|ELG60374.1| [protein-PII] uridylyltransferase [Escherichia coli KTE123]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|425286680|ref|ZP_18677634.1| protein-P-II uridylyltransferase [Escherichia coli 3006]
gi|408219791|gb|EKI43909.1| protein-P-II uridylyltransferase [Escherichia coli 3006]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419140131|ref|ZP_13684915.1| protein-P-II uridylyltransferase [Escherichia coli DEC5E]
gi|377978929|gb|EHV42208.1| protein-P-II uridylyltransferase [Escherichia coli DEC5E]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|386622578|ref|YP_006142306.1| uridylyltransferase [Escherichia coli O7:K1 str. CE10]
gi|349736316|gb|AEQ11022.1| uridylyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417632087|ref|ZP_12282313.1| protein-P-II uridylyltransferase [Escherichia coli STEC_MHI813]
gi|345368238|gb|EGX00245.1| protein-P-II uridylyltransferase [Escherichia coli STEC_MHI813]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|331671675|ref|ZP_08372473.1| protein-P-II uridylyltransferase [Escherichia coli TA280]
gi|331071520|gb|EGI42877.1| protein-P-II uridylyltransferase [Escherichia coli TA280]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|300938573|ref|ZP_07153307.1| protein-P-II uridylyltransferase [Escherichia coli MS 21-1]
gi|432678579|ref|ZP_19913984.1| [protein-PII] uridylyltransferase [Escherichia coli KTE143]
gi|300456486|gb|EFK19979.1| protein-P-II uridylyltransferase [Escherichia coli MS 21-1]
gi|431225535|gb|ELF22735.1| [protein-PII] uridylyltransferase [Escherichia coli KTE143]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|194693448|gb|ACF80808.1| unknown [Zea mays]
Length = 178
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVIDC 76
+DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F +
Sbjct: 1 MDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLF-AVQS 59
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSEV 133
DGKKI D+ + RL + P + V P E +E +G RP +F ++
Sbjct: 60 DGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFYDI 118
Query: 134 CAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFNVL 188
L +L + AEI H DR V + +H A++ S I + + N+L
Sbjct: 119 TLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTNML 173
Query: 189 RGYD 192
G+D
Sbjct: 174 MGWD 177
>gi|432858470|ref|ZP_20084966.1| [protein-PII] uridylyltransferase [Escherichia coli KTE146]
gi|431408713|gb|ELG91896.1| [protein-PII] uridylyltransferase [Escherichia coli KTE146]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I P+S
Sbjct: 853 RVEDVFFITDAHNQPLS 869
>gi|392944986|ref|ZP_10310628.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
gi|392288280|gb|EIV94304.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
Length = 807
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
PQV + TV+ +R+ DR +LF IV L+ ++ V +V T + FY++
Sbjct: 683 PQVIFDDGLGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQE 742
Query: 300 VDGLPISSEAERERVIQCLEAAI 322
DG P++ +A R + + + AA+
Sbjct: 743 ADGRPVADDARRREIARAVLAAL 765
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
PP+V+ D+ TV++V + ++ G+L ++++ L+ + L + A +++ G +D F
Sbjct: 681 GPPQVIFDDG-LGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFY 739
Query: 73 VIDCDGKKIRD 83
V + DG+ + D
Sbjct: 740 VQEADGRPVAD 750
>gi|422783064|ref|ZP_16835848.1| protein-P-II uridylyltransferase [Escherichia coli TW10509]
gi|323975666|gb|EGB70762.1| protein-P-II uridylyltransferase [Escherichia coli TW10509]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|187731963|ref|YP_001878968.1| PII uridylyl-transferase [Shigella boydii CDC 3083-94]
gi|238689498|sp|B2U309.1|GLND_SHIB3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|187428955|gb|ACD08229.1| protein-P-II uridylyltransferase [Shigella boydii CDC 3083-94]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|24111602|ref|NP_706112.1| PII uridylyl-transferase [Shigella flexneri 2a str. 301]
gi|30061724|ref|NP_835895.1| PII uridylyl-transferase [Shigella flexneri 2a str. 2457T]
gi|384541737|ref|YP_005725798.1| uridylyltransferase [Shigella flexneri 2002017]
gi|415859696|ref|ZP_11533895.1| protein-P-II uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|417699829|ref|ZP_12348977.1| protein-P-II uridylyltransferase [Shigella flexneri K-218]
gi|417705659|ref|ZP_12354734.1| protein-P-II uridylyltransferase [Shigella flexneri VA-6]
gi|417721147|ref|ZP_12370001.1| protein-P-II uridylyltransferase [Shigella flexneri K-304]
gi|417726512|ref|ZP_12375262.1| protein-P-II uridylyltransferase [Shigella flexneri K-671]
gi|417731647|ref|ZP_12380321.1| protein-P-II uridylyltransferase [Shigella flexneri 2747-71]
gi|417737000|ref|ZP_12385613.1| protein-P-II uridylyltransferase [Shigella flexneri 4343-70]
gi|417741650|ref|ZP_12390206.1| protein-P-II uridylyltransferase [Shigella flexneri 2930-71]
gi|417826180|ref|ZP_12472762.1| protein-P-II uridylyltransferase [Shigella flexneri J1713]
gi|420318640|ref|ZP_14820500.1| protein-P-II uridylyltransferase [Shigella flexneri 2850-71]
gi|420329325|ref|ZP_14831042.1| protein-P-II uridylyltransferase [Shigella flexneri K-1770]
gi|420339634|ref|ZP_14841171.1| protein-P-II uridylyltransferase [Shigella flexneri K-404]
gi|52000967|sp|Q83MD4.1|GLND_SHIFL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24050368|gb|AAN41819.1| PII-uridylyltransferase [Shigella flexneri 2a str. 301]
gi|30039966|gb|AAP15700.1| PII-uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|281599521|gb|ADA72505.1| uridylyltransferase [Shigella flexneri 2002017]
gi|313646774|gb|EFS11233.1| protein-P-II uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|332762039|gb|EGJ92310.1| protein-P-II uridylyltransferase [Shigella flexneri 2747-71]
gi|332762169|gb|EGJ92438.1| protein-P-II uridylyltransferase [Shigella flexneri 4343-70]
gi|332765013|gb|EGJ95241.1| protein-P-II uridylyltransferase [Shigella flexneri K-671]
gi|332768668|gb|EGJ98848.1| protein-P-II uridylyltransferase [Shigella flexneri 2930-71]
gi|333009087|gb|EGK28543.1| protein-P-II uridylyltransferase [Shigella flexneri K-218]
gi|333010660|gb|EGK30093.1| protein-P-II uridylyltransferase [Shigella flexneri VA-6]
gi|333022204|gb|EGK41443.1| protein-P-II uridylyltransferase [Shigella flexneri K-304]
gi|335578367|gb|EGM63585.1| protein-P-II uridylyltransferase [Shigella flexneri J1713]
gi|391255483|gb|EIQ14631.1| protein-P-II uridylyltransferase [Shigella flexneri 2850-71]
gi|391260951|gb|EIQ20001.1| protein-P-II uridylyltransferase [Shigella flexneri K-1770]
gi|391275177|gb|EIQ33970.1| protein-P-II uridylyltransferase [Shigella flexneri K-404]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|170021480|ref|YP_001726434.1| PII uridylyl-transferase [Escherichia coli ATCC 8739]
gi|194439141|ref|ZP_03071223.1| protein-P-II uridylyltransferase [Escherichia coli 101-1]
gi|251783726|ref|YP_002998030.1| uridylyl-removing enzyme / uridylyltransferase [Escherichia coli
BL21(DE3)]
gi|253774806|ref|YP_003037637.1| PII uridylyl-transferase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160286|ref|YP_003043394.1| PII uridylyl-transferase [Escherichia coli B str. REL606]
gi|254287089|ref|YP_003052837.1| PII uridylyl-transferase [Escherichia coli BL21(DE3)]
gi|300932120|ref|ZP_07147406.1| protein-P-II uridylyltransferase [Escherichia coli MS 187-1]
gi|312970266|ref|ZP_07784448.1| protein-P-II uridylyltransferase [Escherichia coli 1827-70]
gi|422788402|ref|ZP_16841139.1| protein-P-II uridylyltransferase [Escherichia coli H489]
gi|442597817|ref|ZP_21015595.1| [Protein-PII] uridylyltransferase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|189041206|sp|B1IQH4.1|GLND_ECOLC RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169756408|gb|ACA79107.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli ATCC 8739]
gi|194421960|gb|EDX37965.1| protein-P-II uridylyltransferase [Escherichia coli 101-1]
gi|242375999|emb|CAQ30681.1| uridylyl-removing enzyme / uridylyltransferase [Escherichia coli
BL21(DE3)]
gi|253325850|gb|ACT30452.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972187|gb|ACT37858.1| PII uridylyl-transferase [Escherichia coli B str. REL606]
gi|253976396|gb|ACT42066.1| PII uridylyl-transferase [Escherichia coli BL21(DE3)]
gi|300460131|gb|EFK23624.1| protein-P-II uridylyltransferase [Escherichia coli MS 187-1]
gi|310337764|gb|EFQ02875.1| protein-P-II uridylyltransferase [Escherichia coli 1827-70]
gi|323959927|gb|EGB55574.1| protein-P-II uridylyltransferase [Escherichia coli H489]
gi|441653482|emb|CCQ03811.1| [Protein-PII] uridylyltransferase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|444978323|ref|ZP_21295331.1| protein-P-II uridylyltransferase [Escherichia coli ATCC 700728]
gi|444601109|gb|ELV75918.1| protein-P-II uridylyltransferase [Escherichia coli ATCC 700728]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|15799849|ref|NP_285861.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EDL933]
gi|15829423|ref|NP_308196.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. Sakai]
gi|168751385|ref|ZP_02776407.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|168755779|ref|ZP_02780786.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168764327|ref|ZP_02789334.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|168770361|ref|ZP_02795368.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168777003|ref|ZP_02802010.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168782058|ref|ZP_02807065.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168789275|ref|ZP_02814282.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168802321|ref|ZP_02827328.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|195938152|ref|ZP_03083534.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4024]
gi|208807602|ref|ZP_03249939.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208814167|ref|ZP_03255496.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208819098|ref|ZP_03259418.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209399551|ref|YP_002268774.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4115]
gi|217325875|ref|ZP_03441959.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254791300|ref|YP_003076137.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. TW14359]
gi|261226921|ref|ZP_05941202.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255325|ref|ZP_05947858.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. FRIK966]
gi|387505094|ref|YP_006157350.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. RM12579]
gi|387880725|ref|YP_006311027.1| PII uridylyl-transferase [Escherichia coli Xuzhou21]
gi|416314050|ref|ZP_11658508.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1044]
gi|416318952|ref|ZP_11661504.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC1212]
gi|416325842|ref|ZP_11666166.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1125]
gi|416777817|ref|ZP_11875457.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. G5101]
gi|416790006|ref|ZP_11880902.1| PII uridylyl-transferase [Escherichia coli O157:H- str. 493-89]
gi|416795821|ref|ZP_11883363.1| PII uridylyl-transferase [Escherichia coli O157:H- str. H 2687]
gi|416807850|ref|ZP_11888189.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. 3256-97]
gi|416818999|ref|ZP_11893069.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. USDA 5905]
gi|416828336|ref|ZP_11897935.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. LSU-61]
gi|419048381|ref|ZP_13595306.1| protein-P-II uridylyltransferase [Escherichia coli DEC3A]
gi|419048741|ref|ZP_13595662.1| protein-P-II uridylyltransferase [Escherichia coli DEC3B]
gi|419054817|ref|ZP_13601678.1| protein-P-II uridylyltransferase [Escherichia coli DEC3C]
gi|419060372|ref|ZP_13607160.1| protein-P-II uridylyltransferase [Escherichia coli DEC3D]
gi|419066204|ref|ZP_13612894.1| protein-P-II uridylyltransferase [Escherichia coli DEC3E]
gi|419073004|ref|ZP_13618580.1| protein-P-II uridylyltransferase [Escherichia coli DEC3F]
gi|419078439|ref|ZP_13623927.1| protein-P-II uridylyltransferase [Escherichia coli DEC4A]
gi|419084088|ref|ZP_13629507.1| protein-P-II uridylyltransferase [Escherichia coli DEC4B]
gi|419090146|ref|ZP_13635468.1| protein-P-II uridylyltransferase [Escherichia coli DEC4C]
gi|419101488|ref|ZP_13646669.1| protein-P-II uridylyltransferase [Escherichia coli DEC4D]
gi|419101726|ref|ZP_13646895.1| protein-P-II uridylyltransferase [Escherichia coli DEC4E]
gi|419112831|ref|ZP_13657869.1| protein-P-II uridylyltransferase [Escherichia coli DEC4F]
gi|419112988|ref|ZP_13658024.1| protein-P-II uridylyltransferase [Escherichia coli DEC5A]
gi|419118495|ref|ZP_13663483.1| protein-P-II uridylyltransferase [Escherichia coli DEC5B]
gi|419124056|ref|ZP_13668966.1| protein-P-II uridylyltransferase [Escherichia coli DEC5C]
gi|419129732|ref|ZP_13674589.1| protein-P-II uridylyltransferase [Escherichia coli DEC5D]
gi|420267202|ref|ZP_14769613.1| protein-P-II uridylyltransferase [Escherichia coli PA22]
gi|420273138|ref|ZP_14775473.1| protein-P-II uridylyltransferase [Escherichia coli PA40]
gi|420283589|ref|ZP_14785814.1| protein-P-II uridylyltransferase [Escherichia coli TW06591]
gi|420284494|ref|ZP_14786714.1| protein-P-II uridylyltransferase [Escherichia coli TW10246]
gi|420290188|ref|ZP_14792357.1| protein-P-II uridylyltransferase [Escherichia coli TW11039]
gi|420295910|ref|ZP_14798008.1| protein-P-II uridylyltransferase [Escherichia coli TW09109]
gi|420301646|ref|ZP_14803681.1| protein-P-II uridylyltransferase [Escherichia coli TW10119]
gi|420307199|ref|ZP_14809175.1| protein-P-II uridylyltransferase [Escherichia coli EC1738]
gi|420312798|ref|ZP_14814713.1| protein-P-II uridylyltransferase [Escherichia coli EC1734]
gi|421810312|ref|ZP_16246132.1| protein-P-II uridylyltransferase [Escherichia coli 8.0416]
gi|421816385|ref|ZP_16251958.1| protein-P-II uridylyltransferase [Escherichia coli 10.0821]
gi|421821778|ref|ZP_16257223.1| protein-P-II uridylyltransferase [Escherichia coli FRIK920]
gi|421828531|ref|ZP_16263863.1| protein-P-II uridylyltransferase [Escherichia coli PA7]
gi|423652531|ref|ZP_17627935.1| protein-P-II uridylyltransferase [Escherichia coli PA31]
gi|424074927|ref|ZP_17812319.1| protein-P-II uridylyltransferase [Escherichia coli FDA505]
gi|424081177|ref|ZP_17818084.1| protein-P-II uridylyltransferase [Escherichia coli FDA517]
gi|424087853|ref|ZP_17824155.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1996]
gi|424094063|ref|ZP_17829876.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1985]
gi|424100476|ref|ZP_17835685.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1990]
gi|424107301|ref|ZP_17841922.1| protein-P-II uridylyltransferase [Escherichia coli 93-001]
gi|424113274|ref|ZP_17847473.1| protein-P-II uridylyltransferase [Escherichia coli PA3]
gi|424119403|ref|ZP_17853162.1| protein-P-II uridylyltransferase [Escherichia coli PA5]
gi|424125620|ref|ZP_17858862.1| protein-P-II uridylyltransferase [Escherichia coli PA9]
gi|424131627|ref|ZP_17864483.1| protein-P-II uridylyltransferase [Escherichia coli PA10]
gi|424138240|ref|ZP_17870582.1| protein-P-II uridylyltransferase [Escherichia coli PA14]
gi|424144694|ref|ZP_17876502.1| protein-P-II uridylyltransferase [Escherichia coli PA15]
gi|424150840|ref|ZP_17882146.1| protein-P-II uridylyltransferase [Escherichia coli PA24]
gi|424260192|ref|ZP_17893128.1| protein-P-II uridylyltransferase [Escherichia coli PA25]
gi|424260877|ref|ZP_17893463.1| protein-P-II uridylyltransferase [Escherichia coli PA28]
gi|424417115|ref|ZP_17899235.1| protein-P-II uridylyltransferase [Escherichia coli PA32]
gi|424453238|ref|ZP_17904825.1| protein-P-II uridylyltransferase [Escherichia coli PA33]
gi|424459517|ref|ZP_17910525.1| protein-P-II uridylyltransferase [Escherichia coli PA39]
gi|424465979|ref|ZP_17916216.1| protein-P-II uridylyltransferase [Escherichia coli PA41]
gi|424472579|ref|ZP_17922291.1| protein-P-II uridylyltransferase [Escherichia coli PA42]
gi|424478549|ref|ZP_17927838.1| protein-P-II uridylyltransferase [Escherichia coli TW07945]
gi|424484575|ref|ZP_17933494.1| protein-P-II uridylyltransferase [Escherichia coli TW09098]
gi|424490668|ref|ZP_17939142.1| protein-P-II uridylyltransferase [Escherichia coli TW09195]
gi|424497789|ref|ZP_17945112.1| protein-P-II uridylyltransferase [Escherichia coli EC4203]
gi|424504035|ref|ZP_17950860.1| protein-P-II uridylyltransferase [Escherichia coli EC4196]
gi|424510277|ref|ZP_17956580.1| protein-P-II uridylyltransferase [Escherichia coli TW14313]
gi|424517858|ref|ZP_17962332.1| protein-P-II uridylyltransferase [Escherichia coli TW14301]
gi|424523686|ref|ZP_17967753.1| protein-P-II uridylyltransferase [Escherichia coli EC4421]
gi|424529892|ref|ZP_17973561.1| protein-P-II uridylyltransferase [Escherichia coli EC4422]
gi|424535863|ref|ZP_17979171.1| protein-P-II uridylyltransferase [Escherichia coli EC4013]
gi|424541751|ref|ZP_17984636.1| protein-P-II uridylyltransferase [Escherichia coli EC4402]
gi|424548076|ref|ZP_17990338.1| protein-P-II uridylyltransferase [Escherichia coli EC4439]
gi|424554365|ref|ZP_17996133.1| protein-P-II uridylyltransferase [Escherichia coli EC4436]
gi|424560711|ref|ZP_18002037.1| protein-P-II uridylyltransferase [Escherichia coli EC4437]
gi|424566721|ref|ZP_18007687.1| protein-P-II uridylyltransferase [Escherichia coli EC4448]
gi|424572919|ref|ZP_18013390.1| protein-P-II uridylyltransferase [Escherichia coli EC1845]
gi|424584747|ref|ZP_18024367.1| protein-P-II uridylyltransferase [Escherichia coli EC1863]
gi|425095561|ref|ZP_18498621.1| protein-P-II uridylyltransferase [Escherichia coli 3.4870]
gi|425101644|ref|ZP_18504332.1| protein-P-II uridylyltransferase [Escherichia coli 5.2239]
gi|425107502|ref|ZP_18509787.1| protein-P-II uridylyltransferase [Escherichia coli 6.0172]
gi|425123314|ref|ZP_18524929.1| protein-P-II uridylyltransferase [Escherichia coli 8.0586]
gi|425129340|ref|ZP_18530483.1| protein-P-II uridylyltransferase [Escherichia coli 8.2524]
gi|425135682|ref|ZP_18536451.1| protein-P-II uridylyltransferase [Escherichia coli 10.0833]
gi|425141628|ref|ZP_18541960.1| protein-P-II uridylyltransferase [Escherichia coli 10.0869]
gi|425147906|ref|ZP_18547843.1| protein-P-II uridylyltransferase [Escherichia coli 88.0221]
gi|425153520|ref|ZP_18553107.1| protein-P-II uridylyltransferase [Escherichia coli PA34]
gi|425159981|ref|ZP_18559191.1| protein-P-II uridylyltransferase [Escherichia coli FDA506]
gi|425165496|ref|ZP_18564339.1| protein-P-II uridylyltransferase [Escherichia coli FDA507]
gi|425171783|ref|ZP_18570220.1| protein-P-II uridylyltransferase [Escherichia coli FDA504]
gi|425177585|ref|ZP_18575672.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1999]
gi|425183809|ref|ZP_18581469.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1997]
gi|425190542|ref|ZP_18587701.1| protein-P-II uridylyltransferase [Escherichia coli NE1487]
gi|425196839|ref|ZP_18593531.1| protein-P-II uridylyltransferase [Escherichia coli NE037]
gi|425203537|ref|ZP_18599699.1| protein-P-II uridylyltransferase [Escherichia coli FRIK2001]
gi|425209312|ref|ZP_18605084.1| protein-P-II uridylyltransferase [Escherichia coli PA4]
gi|425215349|ref|ZP_18610703.1| protein-P-II uridylyltransferase [Escherichia coli PA23]
gi|425221916|ref|ZP_18616811.1| protein-P-II uridylyltransferase [Escherichia coli PA49]
gi|425228167|ref|ZP_18622599.1| protein-P-II uridylyltransferase [Escherichia coli PA45]
gi|425234467|ref|ZP_18628461.1| protein-P-II uridylyltransferase [Escherichia coli TT12B]
gi|425240444|ref|ZP_18634113.1| protein-P-II uridylyltransferase [Escherichia coli MA6]
gi|425246522|ref|ZP_18639761.1| protein-P-II uridylyltransferase [Escherichia coli 5905]
gi|425252312|ref|ZP_18645231.1| protein-P-II uridylyltransferase [Escherichia coli CB7326]
gi|425258646|ref|ZP_18651051.1| protein-P-II uridylyltransferase [Escherichia coli EC96038]
gi|425264761|ref|ZP_18656717.1| protein-P-II uridylyltransferase [Escherichia coli 5412]
gi|425292144|ref|ZP_18682782.1| protein-P-II uridylyltransferase [Escherichia coli PA38]
gi|425308922|ref|ZP_18698434.1| protein-P-II uridylyltransferase [Escherichia coli EC1735]
gi|425314850|ref|ZP_18703968.1| protein-P-II uridylyltransferase [Escherichia coli EC1736]
gi|425320927|ref|ZP_18709647.1| protein-P-II uridylyltransferase [Escherichia coli EC1737]
gi|425327087|ref|ZP_18715359.1| protein-P-II uridylyltransferase [Escherichia coli EC1846]
gi|425333276|ref|ZP_18721045.1| protein-P-II uridylyltransferase [Escherichia coli EC1847]
gi|425339695|ref|ZP_18726976.1| protein-P-II uridylyltransferase [Escherichia coli EC1848]
gi|425345573|ref|ZP_18732421.1| protein-P-II uridylyltransferase [Escherichia coli EC1849]
gi|425351789|ref|ZP_18738210.1| protein-P-II uridylyltransferase [Escherichia coli EC1850]
gi|425357774|ref|ZP_18743788.1| protein-P-II uridylyltransferase [Escherichia coli EC1856]
gi|425363888|ref|ZP_18749490.1| protein-P-II uridylyltransferase [Escherichia coli EC1862]
gi|425370323|ref|ZP_18755329.1| protein-P-II uridylyltransferase [Escherichia coli EC1864]
gi|425389175|ref|ZP_18772709.1| protein-P-II uridylyltransferase [Escherichia coli EC1866]
gi|425389820|ref|ZP_18773315.1| protein-P-II uridylyltransferase [Escherichia coli EC1868]
gi|425395943|ref|ZP_18779023.1| protein-P-II uridylyltransferase [Escherichia coli EC1869]
gi|425408099|ref|ZP_18790291.1| protein-P-II uridylyltransferase [Escherichia coli EC1870]
gi|425408474|ref|ZP_18790663.1| protein-P-II uridylyltransferase [Escherichia coli NE098]
gi|425414743|ref|ZP_18796414.1| protein-P-II uridylyltransferase [Escherichia coli FRIK523]
gi|425425892|ref|ZP_18806977.1| protein-P-II uridylyltransferase [Escherichia coli 0.1304]
gi|428944524|ref|ZP_19017216.1| protein-P-II uridylyltransferase [Escherichia coli 88.1467]
gi|428950698|ref|ZP_19022879.1| protein-P-II uridylyltransferase [Escherichia coli 88.1042]
gi|428956545|ref|ZP_19028293.1| protein-P-II uridylyltransferase [Escherichia coli 89.0511]
gi|428962912|ref|ZP_19034133.1| protein-P-II uridylyltransferase [Escherichia coli 90.0091]
gi|428968975|ref|ZP_19039642.1| protein-P-II uridylyltransferase [Escherichia coli 90.0039]
gi|428975386|ref|ZP_19045597.1| protein-P-II uridylyltransferase [Escherichia coli 90.2281]
gi|428981202|ref|ZP_19050973.1| protein-P-II uridylyltransferase [Escherichia coli 93.0055]
gi|428987500|ref|ZP_19056827.1| protein-P-II uridylyltransferase [Escherichia coli 93.0056]
gi|428993311|ref|ZP_19062255.1| protein-P-II uridylyltransferase [Escherichia coli 94.0618]
gi|428999401|ref|ZP_19067951.1| protein-P-II uridylyltransferase [Escherichia coli 95.0183]
gi|429005639|ref|ZP_19073608.1| protein-P-II uridylyltransferase [Escherichia coli 95.1288]
gi|429012001|ref|ZP_19079290.1| protein-P-II uridylyltransferase [Escherichia coli 95.0943]
gi|429018224|ref|ZP_19085040.1| protein-P-II uridylyltransferase [Escherichia coli 96.0428]
gi|429023882|ref|ZP_19090333.1| protein-P-II uridylyltransferase [Escherichia coli 96.0427]
gi|429030186|ref|ZP_19096095.1| protein-P-II uridylyltransferase [Escherichia coli 96.0939]
gi|429036339|ref|ZP_19101818.1| protein-P-II uridylyltransferase [Escherichia coli 96.0932]
gi|429042371|ref|ZP_19107409.1| protein-P-II uridylyltransferase [Escherichia coli 96.0107]
gi|429048143|ref|ZP_19112811.1| protein-P-II uridylyltransferase [Escherichia coli 97.0003]
gi|429053506|ref|ZP_19118022.1| protein-P-II uridylyltransferase [Escherichia coli 97.1742]
gi|429059207|ref|ZP_19123377.1| protein-P-II uridylyltransferase [Escherichia coli 97.0007]
gi|429071207|ref|ZP_19134575.1| protein-P-II uridylyltransferase [Escherichia coli 99.0678]
gi|429076437|ref|ZP_19139667.1| protein-P-II uridylyltransferase [Escherichia coli 99.0713]
gi|429823649|ref|ZP_19355206.1| protein-P-II uridylyltransferase [Escherichia coli 96.0109]
gi|429830020|ref|ZP_19360937.1| protein-P-II uridylyltransferase [Escherichia coli 97.0010]
gi|444922365|ref|ZP_21242129.1| protein-P-II uridylyltransferase [Escherichia coli 09BKT078844]
gi|444928682|ref|ZP_21247854.1| protein-P-II uridylyltransferase [Escherichia coli 99.0814]
gi|444934081|ref|ZP_21253045.1| protein-P-II uridylyltransferase [Escherichia coli 99.0815]
gi|444939649|ref|ZP_21258319.1| protein-P-II uridylyltransferase [Escherichia coli 99.0816]
gi|444945199|ref|ZP_21263637.1| protein-P-II uridylyltransferase [Escherichia coli 99.0839]
gi|444950772|ref|ZP_21269016.1| protein-P-II uridylyltransferase [Escherichia coli 99.0848]
gi|444956246|ref|ZP_21274270.1| protein-P-II uridylyltransferase [Escherichia coli 99.1753]
gi|444961561|ref|ZP_21279334.1| protein-P-II uridylyltransferase [Escherichia coli 99.1775]
gi|444967308|ref|ZP_21284794.1| protein-P-II uridylyltransferase [Escherichia coli 99.1793]
gi|444972814|ref|ZP_21290118.1| protein-P-II uridylyltransferase [Escherichia coli 99.1805]
gi|444988886|ref|ZP_21305637.1| protein-P-II uridylyltransferase [Escherichia coli PA19]
gi|444994199|ref|ZP_21310810.1| protein-P-II uridylyltransferase [Escherichia coli PA13]
gi|444999715|ref|ZP_21316190.1| protein-P-II uridylyltransferase [Escherichia coli PA2]
gi|445005176|ref|ZP_21321530.1| protein-P-II uridylyltransferase [Escherichia coli PA47]
gi|445010355|ref|ZP_21326561.1| protein-P-II uridylyltransferase [Escherichia coli PA48]
gi|445016118|ref|ZP_21332179.1| protein-P-II uridylyltransferase [Escherichia coli PA8]
gi|445021590|ref|ZP_21337524.1| protein-P-II uridylyltransferase [Escherichia coli 7.1982]
gi|445026833|ref|ZP_21342622.1| protein-P-II uridylyltransferase [Escherichia coli 99.1781]
gi|445032307|ref|ZP_21347945.1| protein-P-II uridylyltransferase [Escherichia coli 99.1762]
gi|445038003|ref|ZP_21353486.1| protein-P-II uridylyltransferase [Escherichia coli PA35]
gi|445043174|ref|ZP_21358523.1| protein-P-II uridylyltransferase [Escherichia coli 3.4880]
gi|445048826|ref|ZP_21364009.1| protein-P-II uridylyltransferase [Escherichia coli 95.0083]
gi|445054446|ref|ZP_21369408.1| protein-P-II uridylyltransferase [Escherichia coli 99.0670]
gi|452969988|ref|ZP_21968215.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4009]
gi|21362567|sp|Q8X8Y6.1|GLND_ECO57 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238057815|sp|B5Z0E5.1|GLND_ECO5E RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|12512889|gb|AAG54469.1|AE005192_11 protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli O157:H7 str. EDL933]
gi|13359625|dbj|BAB33592.1| protein PII-uridylyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|187767697|gb|EDU31541.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188014575|gb|EDU52697.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|189000436|gb|EDU69422.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189357031|gb|EDU75450.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189360712|gb|EDU79131.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189365647|gb|EDU84063.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|189371115|gb|EDU89531.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189375685|gb|EDU94101.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208727403|gb|EDZ77004.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208735444|gb|EDZ84131.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208739221|gb|EDZ86903.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209160951|gb|ACI38384.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209745874|gb|ACI71244.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745876|gb|ACI71245.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745878|gb|ACI71246.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745880|gb|ACI71247.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745882|gb|ACI71248.1| protein PII-uridylyltransferase [Escherichia coli]
gi|217322096|gb|EEC30520.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254590700|gb|ACT70061.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. TW14359]
gi|320190308|gb|EFW64958.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC1212]
gi|320639973|gb|EFX09558.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. G5101]
gi|320644743|gb|EFX13787.1| PII uridylyl-transferase [Escherichia coli O157:H- str. 493-89]
gi|320652899|gb|EFX21137.1| PII uridylyl-transferase [Escherichia coli O157:H- str. H 2687]
gi|320658287|gb|EFX26016.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320663597|gb|EFX30881.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. USDA 5905]
gi|320668910|gb|EFX35705.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. LSU-61]
gi|326339779|gb|EGD63587.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1044]
gi|326345114|gb|EGD68857.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1125]
gi|374357088|gb|AEZ38795.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. RM12579]
gi|377887402|gb|EHU51879.1| protein-P-II uridylyltransferase [Escherichia coli DEC3A]
gi|377902935|gb|EHU67234.1| protein-P-II uridylyltransferase [Escherichia coli DEC3B]
gi|377915444|gb|EHU79553.1| protein-P-II uridylyltransferase [Escherichia coli DEC3C]
gi|377919721|gb|EHU83759.1| protein-P-II uridylyltransferase [Escherichia coli DEC3D]
gi|377921265|gb|EHU85265.1| protein-P-II uridylyltransferase [Escherichia coli DEC3E]
gi|377933579|gb|EHU97423.1| protein-P-II uridylyltransferase [Escherichia coli DEC3F]
gi|377934957|gb|EHU98782.1| protein-P-II uridylyltransferase [Escherichia coli DEC4A]
gi|377936044|gb|EHU99838.1| protein-P-II uridylyltransferase [Escherichia coli DEC4D]
gi|377941318|gb|EHV05060.1| protein-P-II uridylyltransferase [Escherichia coli DEC4B]
gi|377950853|gb|EHV14474.1| protein-P-II uridylyltransferase [Escherichia coli DEC4C]
gi|377951904|gb|EHV15512.1| protein-P-II uridylyltransferase [Escherichia coli DEC4F]
gi|377955947|gb|EHV19499.1| protein-P-II uridylyltransferase [Escherichia coli DEC4E]
gi|377966841|gb|EHV30251.1| protein-P-II uridylyltransferase [Escherichia coli DEC5A]
gi|377974726|gb|EHV38053.1| protein-P-II uridylyltransferase [Escherichia coli DEC5B]
gi|377982977|gb|EHV46227.1| protein-P-II uridylyltransferase [Escherichia coli DEC5D]
gi|377983775|gb|EHV47017.1| protein-P-II uridylyltransferase [Escherichia coli DEC5C]
gi|386794183|gb|AFJ27217.1| PII uridylyl-transferase [Escherichia coli Xuzhou21]
gi|390651635|gb|EIN29906.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1996]
gi|390654242|gb|EIN32295.1| protein-P-II uridylyltransferase [Escherichia coli FDA517]
gi|390654536|gb|EIN32582.1| protein-P-II uridylyltransferase [Escherichia coli FDA505]
gi|390670999|gb|EIN47487.1| protein-P-II uridylyltransferase [Escherichia coli 93-001]
gi|390674921|gb|EIN51086.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1990]
gi|390676333|gb|EIN52439.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1985]
gi|390690037|gb|EIN64939.1| protein-P-II uridylyltransferase [Escherichia coli PA3]
gi|390693832|gb|EIN68449.1| protein-P-II uridylyltransferase [Escherichia coli PA9]
gi|390694794|gb|EIN69352.1| protein-P-II uridylyltransferase [Escherichia coli PA5]
gi|390709617|gb|EIN82699.1| protein-P-II uridylyltransferase [Escherichia coli PA10]
gi|390712068|gb|EIN85026.1| protein-P-II uridylyltransferase [Escherichia coli PA15]
gi|390715192|gb|EIN88059.1| protein-P-II uridylyltransferase [Escherichia coli PA14]
gi|390716663|gb|EIN89458.1| protein-P-II uridylyltransferase [Escherichia coli PA25]
gi|390721591|gb|EIN94285.1| protein-P-II uridylyltransferase [Escherichia coli PA22]
gi|390734882|gb|EIO06311.1| protein-P-II uridylyltransferase [Escherichia coli PA24]
gi|390738332|gb|EIO09550.1| protein-P-II uridylyltransferase [Escherichia coli PA28]
gi|390753226|gb|EIO22949.1| protein-P-II uridylyltransferase [Escherichia coli PA31]
gi|390753625|gb|EIO23302.1| protein-P-II uridylyltransferase [Escherichia coli PA32]
gi|390758169|gb|EIO27637.1| protein-P-II uridylyltransferase [Escherichia coli PA33]
gi|390763427|gb|EIO32676.1| protein-P-II uridylyltransferase [Escherichia coli PA40]
gi|390777307|gb|EIO45151.1| protein-P-II uridylyltransferase [Escherichia coli PA41]
gi|390778256|gb|EIO46014.1| protein-P-II uridylyltransferase [Escherichia coli TW06591]
gi|390781190|gb|EIO48874.1| protein-P-II uridylyltransferase [Escherichia coli PA42]
gi|390788086|gb|EIO55556.1| protein-P-II uridylyltransferase [Escherichia coli PA39]
gi|390796282|gb|EIO63558.1| protein-P-II uridylyltransferase [Escherichia coli TW10246]
gi|390802914|gb|EIO69943.1| protein-P-II uridylyltransferase [Escherichia coli TW11039]
gi|390812279|gb|EIO78962.1| protein-P-II uridylyltransferase [Escherichia coli TW07945]
gi|390812708|gb|EIO79384.1| protein-P-II uridylyltransferase [Escherichia coli TW09109]
gi|390820239|gb|EIO86545.1| protein-P-II uridylyltransferase [Escherichia coli TW10119]
gi|390824961|gb|EIO90910.1| protein-P-II uridylyltransferase [Escherichia coli TW09098]
gi|390838045|gb|EIP02363.1| protein-P-II uridylyltransferase [Escherichia coli EC4203]
gi|390841069|gb|EIP05040.1| protein-P-II uridylyltransferase [Escherichia coli EC4196]
gi|390845173|gb|EIP08851.1| protein-P-II uridylyltransferase [Escherichia coli TW09195]
gi|390856528|gb|EIP19108.1| protein-P-II uridylyltransferase [Escherichia coli TW14301]
gi|390861560|gb|EIP23808.1| protein-P-II uridylyltransferase [Escherichia coli EC4421]
gi|390862622|gb|EIP24797.1| protein-P-II uridylyltransferase [Escherichia coli TW14313]
gi|390872591|gb|EIP33880.1| protein-P-II uridylyltransferase [Escherichia coli EC4422]
gi|390877801|gb|EIP38696.1| protein-P-II uridylyltransferase [Escherichia coli EC4013]
gi|390887310|gb|EIP47294.1| protein-P-II uridylyltransferase [Escherichia coli EC4402]
gi|390888990|gb|EIP48772.1| protein-P-II uridylyltransferase [Escherichia coli EC4439]
gi|390896384|gb|EIP55774.1| protein-P-II uridylyltransferase [Escherichia coli EC4436]
gi|390904305|gb|EIP63301.1| protein-P-II uridylyltransferase [Escherichia coli EC1738]
gi|390912550|gb|EIP71202.1| protein-P-II uridylyltransferase [Escherichia coli EC4437]
gi|390912650|gb|EIP71296.1| protein-P-II uridylyltransferase [Escherichia coli EC1734]
gi|390914290|gb|EIP72834.1| protein-P-II uridylyltransferase [Escherichia coli EC1863]
gi|390917730|gb|EIP76147.1| protein-P-II uridylyltransferase [Escherichia coli EC4448]
gi|390926737|gb|EIP84296.1| protein-P-II uridylyltransferase [Escherichia coli EC1845]
gi|408073657|gb|EKH07966.1| protein-P-II uridylyltransferase [Escherichia coli PA7]
gi|408077392|gb|EKH11600.1| protein-P-II uridylyltransferase [Escherichia coli FRIK920]
gi|408087405|gb|EKH20854.1| protein-P-II uridylyltransferase [Escherichia coli PA34]
gi|408092009|gb|EKH25208.1| protein-P-II uridylyltransferase [Escherichia coli FDA506]
gi|408097749|gb|EKH30632.1| protein-P-II uridylyltransferase [Escherichia coli FDA507]
gi|408103931|gb|EKH36260.1| protein-P-II uridylyltransferase [Escherichia coli FDA504]
gi|408111360|gb|EKH43111.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1999]
gi|408117467|gb|EKH48652.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1997]
gi|408123163|gb|EKH53965.1| protein-P-II uridylyltransferase [Escherichia coli NE1487]
gi|408131280|gb|EKH61322.1| protein-P-II uridylyltransferase [Escherichia coli NE037]
gi|408133082|gb|EKH62999.1| protein-P-II uridylyltransferase [Escherichia coli FRIK2001]
gi|408142179|gb|EKH71560.1| protein-P-II uridylyltransferase [Escherichia coli PA4]
gi|408151000|gb|EKH79518.1| protein-P-II uridylyltransferase [Escherichia coli PA23]
gi|408154563|gb|EKH82894.1| protein-P-II uridylyltransferase [Escherichia coli PA49]
gi|408159791|gb|EKH87843.1| protein-P-II uridylyltransferase [Escherichia coli PA45]
gi|408168055|gb|EKH95508.1| protein-P-II uridylyltransferase [Escherichia coli TT12B]
gi|408173843|gb|EKI00846.1| protein-P-II uridylyltransferase [Escherichia coli MA6]
gi|408175504|gb|EKI02406.1| protein-P-II uridylyltransferase [Escherichia coli 5905]
gi|408188031|gb|EKI13920.1| protein-P-II uridylyltransferase [Escherichia coli CB7326]
gi|408193763|gb|EKI19281.1| protein-P-II uridylyltransferase [Escherichia coli 5412]
gi|408194083|gb|EKI19583.1| protein-P-II uridylyltransferase [Escherichia coli EC96038]
gi|408234524|gb|EKI57537.1| protein-P-II uridylyltransferase [Escherichia coli PA38]
gi|408240846|gb|EKI63497.1| protein-P-II uridylyltransferase [Escherichia coli EC1735]
gi|408250307|gb|EKI72167.1| protein-P-II uridylyltransferase [Escherichia coli EC1736]
gi|408254650|gb|EKI76153.1| protein-P-II uridylyltransferase [Escherichia coli EC1737]
gi|408260953|gb|EKI82002.1| protein-P-II uridylyltransferase [Escherichia coli EC1846]
gi|408269563|gb|EKI89808.1| protein-P-II uridylyltransferase [Escherichia coli EC1847]
gi|408271476|gb|EKI91603.1| protein-P-II uridylyltransferase [Escherichia coli EC1848]
gi|408280437|gb|EKI99989.1| protein-P-II uridylyltransferase [Escherichia coli EC1849]
gi|408286292|gb|EKJ05220.1| protein-P-II uridylyltransferase [Escherichia coli EC1850]
gi|408289580|gb|EKJ08338.1| protein-P-II uridylyltransferase [Escherichia coli EC1856]
gi|408301855|gb|EKJ19416.1| protein-P-II uridylyltransferase [Escherichia coli EC1862]
gi|408302059|gb|EKJ19608.1| protein-P-II uridylyltransferase [Escherichia coli EC1864]
gi|408303283|gb|EKJ20749.1| protein-P-II uridylyltransferase [Escherichia coli EC1866]
gi|408319622|gb|EKJ35744.1| protein-P-II uridylyltransferase [Escherichia coli EC1868]
gi|408320284|gb|EKJ36387.1| protein-P-II uridylyltransferase [Escherichia coli EC1870]
gi|408332525|gb|EKJ47560.1| protein-P-II uridylyltransferase [Escherichia coli EC1869]
gi|408338451|gb|EKJ53099.1| protein-P-II uridylyltransferase [Escherichia coli NE098]
gi|408351201|gb|EKJ64992.1| protein-P-II uridylyltransferase [Escherichia coli FRIK523]
gi|408353692|gb|EKJ67187.1| protein-P-II uridylyltransferase [Escherichia coli 0.1304]
gi|408560616|gb|EKK36879.1| protein-P-II uridylyltransferase [Escherichia coli 5.2239]
gi|408560969|gb|EKK37217.1| protein-P-II uridylyltransferase [Escherichia coli 3.4870]
gi|408561585|gb|EKK37788.1| protein-P-II uridylyltransferase [Escherichia coli 6.0172]
gi|408586234|gb|EKK61017.1| protein-P-II uridylyltransferase [Escherichia coli 8.0586]
gi|408592166|gb|EKK66559.1| protein-P-II uridylyltransferase [Escherichia coli 8.2524]
gi|408593917|gb|EKK68225.1| protein-P-II uridylyltransferase [Escherichia coli 10.0833]
gi|408605669|gb|EKK79163.1| protein-P-II uridylyltransferase [Escherichia coli 10.0869]
gi|408606378|gb|EKK79825.1| protein-P-II uridylyltransferase [Escherichia coli 8.0416]
gi|408613536|gb|EKK86824.1| protein-P-II uridylyltransferase [Escherichia coli 88.0221]
gi|408618379|gb|EKK91466.1| protein-P-II uridylyltransferase [Escherichia coli 10.0821]
gi|427215872|gb|EKV85038.1| protein-P-II uridylyltransferase [Escherichia coli 88.1042]
gi|427219314|gb|EKV88283.1| protein-P-II uridylyltransferase [Escherichia coli 89.0511]
gi|427219563|gb|EKV88525.1| protein-P-II uridylyltransferase [Escherichia coli 88.1467]
gi|427235292|gb|EKW02914.1| protein-P-II uridylyltransferase [Escherichia coli 90.0039]
gi|427235357|gb|EKW02978.1| protein-P-II uridylyltransferase [Escherichia coli 90.2281]
gi|427238019|gb|EKW05541.1| protein-P-II uridylyltransferase [Escherichia coli 90.0091]
gi|427252399|gb|EKW18888.1| protein-P-II uridylyltransferase [Escherichia coli 93.0056]
gi|427254222|gb|EKW20590.1| protein-P-II uridylyltransferase [Escherichia coli 93.0055]
gi|427255280|gb|EKW21551.1| protein-P-II uridylyltransferase [Escherichia coli 94.0618]
gi|427271746|gb|EKW36537.1| protein-P-II uridylyltransferase [Escherichia coli 95.0943]
gi|427272295|gb|EKW37048.1| protein-P-II uridylyltransferase [Escherichia coli 95.0183]
gi|427278543|gb|EKW43000.1| protein-P-II uridylyltransferase [Escherichia coli 95.1288]
gi|427287297|gb|EKW51065.1| protein-P-II uridylyltransferase [Escherichia coli 96.0428]
gi|427293426|gb|EKW56680.1| protein-P-II uridylyltransferase [Escherichia coli 96.0427]
gi|427295005|gb|EKW58159.1| protein-P-II uridylyltransferase [Escherichia coli 96.0939]
gi|427305704|gb|EKW68298.1| protein-P-II uridylyltransferase [Escherichia coli 97.0003]
gi|427307887|gb|EKW70311.1| protein-P-II uridylyltransferase [Escherichia coli 96.0932]
gi|427312425|gb|EKW74581.1| protein-P-II uridylyltransferase [Escherichia coli 96.0107]
gi|427322870|gb|EKW84491.1| protein-P-II uridylyltransferase [Escherichia coli 97.1742]
gi|427323590|gb|EKW85151.1| protein-P-II uridylyltransferase [Escherichia coli 97.0007]
gi|427335512|gb|EKW96542.1| protein-P-II uridylyltransferase [Escherichia coli 99.0713]
gi|427335913|gb|EKW96942.1| protein-P-II uridylyltransferase [Escherichia coli 99.0678]
gi|429260852|gb|EKY44383.1| protein-P-II uridylyltransferase [Escherichia coli 96.0109]
gi|429262277|gb|EKY45620.1| protein-P-II uridylyltransferase [Escherichia coli 97.0010]
gi|444543492|gb|ELV22754.1| protein-P-II uridylyltransferase [Escherichia coli 99.0814]
gi|444552195|gb|ELV30038.1| protein-P-II uridylyltransferase [Escherichia coli 09BKT078844]
gi|444552585|gb|ELV30372.1| protein-P-II uridylyltransferase [Escherichia coli 99.0815]
gi|444566164|gb|ELV43000.1| protein-P-II uridylyltransferase [Escherichia coli 99.0839]
gi|444568464|gb|ELV45139.1| protein-P-II uridylyltransferase [Escherichia coli 99.0816]
gi|444573014|gb|ELV49415.1| protein-P-II uridylyltransferase [Escherichia coli 99.0848]
gi|444583654|gb|ELV59350.1| protein-P-II uridylyltransferase [Escherichia coli 99.1753]
gi|444586558|gb|ELV62056.1| protein-P-II uridylyltransferase [Escherichia coli 99.1775]
gi|444587278|gb|ELV62748.1| protein-P-II uridylyltransferase [Escherichia coli 99.1793]
gi|444610051|gb|ELV84487.1| protein-P-II uridylyltransferase [Escherichia coli 99.1805]
gi|444616172|gb|ELV90342.1| protein-P-II uridylyltransferase [Escherichia coli PA13]
gi|444616580|gb|ELV90742.1| protein-P-II uridylyltransferase [Escherichia coli PA19]
gi|444625216|gb|ELV99087.1| protein-P-II uridylyltransferase [Escherichia coli PA2]
gi|444633759|gb|ELW07262.1| protein-P-II uridylyltransferase [Escherichia coli PA48]
gi|444634084|gb|ELW07575.1| protein-P-II uridylyltransferase [Escherichia coli PA47]
gi|444639386|gb|ELW12705.1| protein-P-II uridylyltransferase [Escherichia coli PA8]
gi|444649181|gb|ELW22087.1| protein-P-II uridylyltransferase [Escherichia coli 7.1982]
gi|444651343|gb|ELW24152.1| protein-P-II uridylyltransferase [Escherichia coli 99.1781]
gi|444655369|gb|ELW27988.1| protein-P-II uridylyltransferase [Escherichia coli 99.1762]
gi|444664547|gb|ELW36735.1| protein-P-II uridylyltransferase [Escherichia coli PA35]
gi|444668830|gb|ELW40830.1| protein-P-II uridylyltransferase [Escherichia coli 3.4880]
gi|444673729|gb|ELW45355.1| protein-P-II uridylyltransferase [Escherichia coli 95.0083]
gi|444675171|gb|ELW46652.1| protein-P-II uridylyltransferase [Escherichia coli 99.0670]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|146155|gb|AAA23878.1| uridylyl transferase [Escherichia coli]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|116747933|ref|YP_844620.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116696997|gb|ABK16185.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R P +V++DN + A T+++V +V++ G+L + + L ++ + I A I++ DV
Sbjct: 769 RTAPSQVLVDNQSSAMYTILEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADV 828
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRL 94
F V G+K+ D E ID +++ L
Sbjct: 829 FYVRTHQGEKVSDPEQIDELKRAL 852
>gi|429064588|ref|ZP_19128488.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
gi|427337371|gb|EKW98289.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419921797|ref|ZP_14439833.1| PII uridylyl-transferase [Escherichia coli 541-15]
gi|388397206|gb|EIL58235.1| PII uridylyl-transferase [Escherichia coli 541-15]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|218688042|ref|YP_002396254.1| PII uridylyl-transferase [Escherichia coli ED1a]
gi|254798833|sp|B7MP27.1|GLND_ECO81 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218425606|emb|CAR06392.1| uridylyltransferase [Escherichia coli ED1a]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|170683624|ref|YP_001742294.1| PII uridylyl-transferase [Escherichia coli SMS-3-5]
gi|226723944|sp|B1LGW8.1|GLND_ECOSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|170521342|gb|ACB19520.1| protein-P-II uridylyltransferase [Escherichia coli SMS-3-5]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|418252904|ref|ZP_12878326.1| protein-P-II uridylyltransferase [Shigella flexneri 6603-63]
gi|397901971|gb|EJL18307.1| protein-P-II uridylyltransferase [Shigella flexneri 6603-63]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|414884706|tpg|DAA60720.1| TPA: hypothetical protein ZEAMMB73_962452 [Zea mays]
Length = 418
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F V
Sbjct: 239 VTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLFAV- 297
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 298 QSDGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 356
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFN 186
++ L +L + AEI H DR V + +H A++ S I + + N
Sbjct: 357 DITLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTN 411
Query: 187 VLRGYD 192
+L G+D
Sbjct: 412 MLMGWD 417
>gi|300993612|ref|ZP_07180468.1| protein-P-II uridylyltransferase [Escherichia coli MS 45-1]
gi|422362645|ref|ZP_16443206.1| protein-P-II uridylyltransferase [Escherichia coli MS 153-1]
gi|432454944|ref|ZP_19697156.1| [protein-PII] uridylyltransferase [Escherichia coli KTE201]
gi|433056492|ref|ZP_20243593.1| [protein-PII] uridylyltransferase [Escherichia coli KTE124]
gi|300406535|gb|EFJ90073.1| protein-P-II uridylyltransferase [Escherichia coli MS 45-1]
gi|315294610|gb|EFU53957.1| protein-P-II uridylyltransferase [Escherichia coli MS 153-1]
gi|430986877|gb|ELD03443.1| [protein-PII] uridylyltransferase [Escherichia coli KTE201]
gi|431575432|gb|ELI48167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE124]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|301028658|ref|ZP_07191881.1| protein-P-II uridylyltransferase [Escherichia coli MS 196-1]
gi|423700948|ref|ZP_17675407.1| [protein-PII] uridylyltransferase [Escherichia coli H730]
gi|433046216|ref|ZP_20233660.1| [protein-PII] uridylyltransferase [Escherichia coli KTE120]
gi|299878327|gb|EFI86538.1| protein-P-II uridylyltransferase [Escherichia coli MS 196-1]
gi|385713648|gb|EIG50579.1| [protein-PII] uridylyltransferase [Escherichia coli H730]
gi|431574060|gb|ELI46845.1| [protein-PII] uridylyltransferase [Escherichia coli KTE120]
Length = 890
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|26246113|ref|NP_752152.1| PII uridylyl-transferase [Escherichia coli CFT073]
gi|227884920|ref|ZP_04002725.1| PII uridylyl-transferase [Escherichia coli 83972]
gi|301049922|ref|ZP_07196845.1| protein-P-II uridylyltransferase [Escherichia coli MS 185-1]
gi|386627688|ref|YP_006147408.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i2']
gi|386632608|ref|YP_006152327.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i14']
gi|386637525|ref|YP_006104323.1| [protein-PII] uridylyltransferase [Escherichia coli ABU 83972]
gi|432410168|ref|ZP_19652855.1| [protein-PII] uridylyltransferase [Escherichia coli KTE39]
gi|432434715|ref|ZP_19677126.1| [protein-PII] uridylyltransferase [Escherichia coli KTE188]
gi|432493994|ref|ZP_19735816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE214]
gi|432510399|ref|ZP_19749259.1| [protein-PII] uridylyltransferase [Escherichia coli KTE220]
gi|432522308|ref|ZP_19759453.1| [protein-PII] uridylyltransferase [Escherichia coli KTE230]
gi|432567039|ref|ZP_19803571.1| [protein-PII] uridylyltransferase [Escherichia coli KTE53]
gi|432591169|ref|ZP_19827502.1| [protein-PII] uridylyltransferase [Escherichia coli KTE60]
gi|432606032|ref|ZP_19842232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE67]
gi|432649536|ref|ZP_19885306.1| [protein-PII] uridylyltransferase [Escherichia coli KTE87]
gi|432782054|ref|ZP_20016241.1| [protein-PII] uridylyltransferase [Escherichia coli KTE63]
gi|432976871|ref|ZP_20165698.1| [protein-PII] uridylyltransferase [Escherichia coli KTE209]
gi|432993923|ref|ZP_20182544.1| [protein-PII] uridylyltransferase [Escherichia coli KTE218]
gi|432998341|ref|ZP_20186891.1| [protein-PII] uridylyltransferase [Escherichia coli KTE223]
gi|433085818|ref|ZP_20272228.1| [protein-PII] uridylyltransferase [Escherichia coli KTE137]
gi|433114103|ref|ZP_20299928.1| [protein-PII] uridylyltransferase [Escherichia coli KTE153]
gi|433123764|ref|ZP_20309363.1| [protein-PII] uridylyltransferase [Escherichia coli KTE160]
gi|433137833|ref|ZP_20323127.1| [protein-PII] uridylyltransferase [Escherichia coli KTE167]
gi|433147585|ref|ZP_20332672.1| [protein-PII] uridylyltransferase [Escherichia coli KTE174]
gi|433211085|ref|ZP_20394709.1| [protein-PII] uridylyltransferase [Escherichia coli KTE99]
gi|442607303|ref|ZP_21022080.1| [Protein-PII] uridylyltransferase [Escherichia coli Nissle 1917]
gi|30173020|sp|Q8CY19.1|GLND_ECOL6 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|26106510|gb|AAN78696.1|AE016755_196 [Protein-PII] uridylyltransferase [Escherichia coli CFT073]
gi|227838058|gb|EEJ48524.1| PII uridylyl-transferase [Escherichia coli 83972]
gi|300298324|gb|EFJ54709.1| protein-P-II uridylyltransferase [Escherichia coli MS 185-1]
gi|307552017|gb|ADN44792.1| [protein-PII] uridylyltransferase [Escherichia coli ABU 83972]
gi|355418587|gb|AER82784.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i2']
gi|355423507|gb|AER87703.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i14']
gi|430938887|gb|ELC59112.1| [protein-PII] uridylyltransferase [Escherichia coli KTE39]
gi|430968200|gb|ELC85433.1| [protein-PII] uridylyltransferase [Escherichia coli KTE188]
gi|431029768|gb|ELD42799.1| [protein-PII] uridylyltransferase [Escherichia coli KTE214]
gi|431032542|gb|ELD45252.1| [protein-PII] uridylyltransferase [Escherichia coli KTE220]
gi|431055648|gb|ELD65187.1| [protein-PII] uridylyltransferase [Escherichia coli KTE230]
gi|431103618|gb|ELE08261.1| [protein-PII] uridylyltransferase [Escherichia coli KTE53]
gi|431133730|gb|ELE35697.1| [protein-PII] uridylyltransferase [Escherichia coli KTE60]
gi|431142300|gb|ELE44050.1| [protein-PII] uridylyltransferase [Escherichia coli KTE67]
gi|431194822|gb|ELE94037.1| [protein-PII] uridylyltransferase [Escherichia coli KTE87]
gi|431332947|gb|ELG20168.1| [protein-PII] uridylyltransferase [Escherichia coli KTE63]
gi|431483829|gb|ELH63518.1| [protein-PII] uridylyltransferase [Escherichia coli KTE209]
gi|431511661|gb|ELH89792.1| [protein-PII] uridylyltransferase [Escherichia coli KTE218]
gi|431516152|gb|ELH93766.1| [protein-PII] uridylyltransferase [Escherichia coli KTE223]
gi|431610721|gb|ELI80006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE137]
gi|431637630|gb|ELJ05685.1| [protein-PII] uridylyltransferase [Escherichia coli KTE153]
gi|431650976|gb|ELJ18283.1| [protein-PII] uridylyltransferase [Escherichia coli KTE160]
gi|431665866|gb|ELJ32575.1| [protein-PII] uridylyltransferase [Escherichia coli KTE167]
gi|431679248|gb|ELJ45161.1| [protein-PII] uridylyltransferase [Escherichia coli KTE174]
gi|431736508|gb|ELJ99833.1| [protein-PII] uridylyltransferase [Escherichia coli KTE99]
gi|441711443|emb|CCQ08057.1| [Protein-PII] uridylyltransferase [Escherichia coli Nissle 1917]
Length = 890
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|442590844|ref|ZP_21009599.1| [Protein-PII] uridylyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441608848|emb|CCP95512.1| [Protein-PII] uridylyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
Length = 890
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|433090513|ref|ZP_20276826.1| [protein-PII] uridylyltransferase [Escherichia coli KTE138]
gi|431616286|gb|ELI85353.1| [protein-PII] uridylyltransferase [Escherichia coli KTE138]
Length = 890
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQAMRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432684046|ref|ZP_19919369.1| [protein-PII] uridylyltransferase [Escherichia coli KTE156]
gi|431225964|gb|ELF23150.1| [protein-PII] uridylyltransferase [Escherichia coli KTE156]
Length = 890
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSQEPPTALTR 897
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSRLQ 878
>gi|320352506|ref|YP_004193845.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
gi|320121008|gb|ADW16554.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
Length = 872
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
+VVIDN T T+++V + L + Q L D L I +A I+++ +DVF V
Sbjct: 768 KVVIDNQTSHQYTIVEVYGADSRSTLYHLTQTLADFGLAIHRARIATEVEQLIDVFYVRT 827
Query: 76 CDGKKIRDKEVIDYIQ 91
G K+ D E +D ++
Sbjct: 828 QAGDKLTDVEAMDKVR 843
>gi|425303678|ref|ZP_18693493.1| protein-P-II uridylyltransferase [Escherichia coli N1]
gi|408232729|gb|EKI55897.1| protein-P-II uridylyltransferase [Escherichia coli N1]
Length = 890
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|326523227|dbj|BAJ88654.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 445
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++++ + DN+ T++++ V++ G+L +++ L D N+ + SD F
Sbjct: 254 MKKVQKATINFDNSLSPAHTLLQILCVDQKGLLYDMLRTLKDCNIKVTYGRFWSDKKGFR 313
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKK+ D E D ++ R+ ++ P V P E +E +G
Sbjct: 314 EVDLFIKQADGKKVIDPEKQDALRSRMRSEM-LHPLRVMIVNRGPDTELLVANPVELSGK 372
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 373 GRPRVFYDATLALKALGICIFSAEI 397
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCLRLQEAIVQQL 885
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQE 879
>gi|332160590|ref|YP_004297167.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664820|gb|ADZ41464.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859596|emb|CBX69936.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica W22703]
Length = 892
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDA-------SFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|444983645|ref|ZP_21300521.1| protein-P-II uridylyltransferase [Escherichia coli PA11]
gi|444601441|gb|ELV76248.1| protein-P-II uridylyltransferase [Escherichia coli PA11]
Length = 890
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|224109832|ref|XP_002315327.1| predicted protein [Populus trichocarpa]
gi|222864367|gb|EEF01498.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T+I++ + G+ +++ L D ++ I + + + G +D+
Sbjct: 230 NPVSVTVDNTFSPSHTLIQILCKDHKGLSYDIMRTLKDYHIQISYGRFFANRKGNCEVDL 289
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D + + RL + P + V P E +E +G RP
Sbjct: 290 F-LMQADGKKIVDPNKQNALCSRLRMEL-LRPVRLAVVSRGPDTELLVANPVELSGRGRP 347
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELL 184
+F ++ L L+ + + EI H +DR V + D G + K I+E +
Sbjct: 348 LVFHDITLALKTLNTRIFSVEIGRHMIHDREWEVYRILLDEGDGLPVSRNK----IEEGV 403
Query: 185 FNVLRGYD 192
VL G++
Sbjct: 404 RKVLMGWE 411
>gi|432562087|ref|ZP_19798720.1| [protein-PII] uridylyltransferase [Escherichia coli KTE51]
gi|431101050|gb|ELE06019.1| [protein-PII] uridylyltransferase [Escherichia coli KTE51]
Length = 890
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|123443487|ref|YP_001007460.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420259722|ref|ZP_14762421.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166232256|sp|A1JP85.1|GLND_YERE8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122090448|emb|CAL13316.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512815|gb|EKA26651.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 892
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDA-------SFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGER 855
>gi|167643982|ref|YP_001681645.1| PII uridylyl-transferase [Caulobacter sp. K31]
gi|167346412|gb|ABZ69147.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter sp. K31]
Length = 941
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVIDN +ATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 835 PTVVIDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 894
Query: 75 DCDGKKIRDKEVI 87
+G K+ D + +
Sbjct: 895 TSEGGKVADAKKV 907
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKI- 81
A+A I + + ++ G+ + ++ + N+V + + S G +DVF+V D G +
Sbjct: 734 ANAAEIVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQG-QALDVFHVQDVTGAALG 792
Query: 82 -RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT--------EEHTSIEF 121
+ V+ + LE P S ++ + PT E T +E
Sbjct: 793 CENPRVLRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVVEA 852
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+G DRPGL + LAD ++ +A I + +RA +V S G + D K+++
Sbjct: 853 SGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-SEGGKVADAKKVT 908
>gi|340782435|ref|YP_004749042.1| protein-PII uridylyltransferase [Acidithiobacillus caldus SM-1]
gi|340556587|gb|AEK58341.1| protein-PII uridylyltransferase [Acidithiobacillus caldus SM-1]
Length = 825
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 82/212 (38%), Gaps = 35/212 (16%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYAIKD 173
E + I G D+ GLF E+ A L N++NA I T H+ RA V D S YA
Sbjct: 634 EGSEILIYGPDKAGLFEEITATLDRHSLNILNARIDTSHDGRALDTFVVLDESHSYA--- 690
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSP--PGIMNRERRLHQIMFDDRDYERVEKAVG 231
R + +E+L D R P P R R L F D E
Sbjct: 691 --RPAAAQEILRR------DLRAVLHGEVPRKPHFGMRHRDLRHRYFADLPLEIFVDNHT 742
Query: 232 RVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
ED T++ +R+ DR LL+ + TL + + +F V+T
Sbjct: 743 LAED----------------TLLEIRAPDRLGLLYRVGGTLRTLGFTIFGAKVSTFGESV 786
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
F+IR+ + R+ I L AA++
Sbjct: 787 EDTFFIRNAQNRKL-----RDNEIAALTAALQ 813
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + +DN+T A+ T++++ + ++ G+L +V L + I A +S+ G D F +
Sbjct: 733 PLEIFVDNHTLAEDTLLEIRAPDRLGLLYRVGGTLRTLGFTIFGAKVSTFGESVEDTFFI 792
Query: 74 IDCDGKKIRDKEV 86
+ +K+RD E+
Sbjct: 793 RNAQNRKLRDNEI 805
>gi|254482871|ref|ZP_05096108.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036952|gb|EEB77622.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 880
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVI 74
R +D+N A+ T I + + + + ++ L ++L I A I +++ G +D F V+
Sbjct: 683 RSSLDSN-VANTTQIFIHARSHAQLFSRICAQLEQLDLSIHDARIYNANDGMTLDTFFVL 741
Query: 75 DCDGKKI-RDKEVIDYIQQRL-----ETD--------------ASFAPSLRSSVGVMPTE 114
DGK I D I++I++ L +TD SF+ +++ V +
Sbjct: 742 GSDGKSIAEDSTRINHIREHLSLTLSDTDNARDIVQRRTPRAKKSFSVPTETAMAVDEVK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
++ +E DRPGL + + + + + A+I T +R V +TD + I DP
Sbjct: 802 NYSVLEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITD-AKQQPITDP 860
Query: 175 KRLSTIKE 182
+ I++
Sbjct: 861 ELCEAIQQ 868
>gi|433547816|ref|ZP_20503867.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
gi|431791242|emb|CCO66907.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
Length = 892
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDA-------SFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGER 855
>gi|413917417|gb|AFW57349.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917418|gb|AFW57350.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 210
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVI 30
DDEY K I+ MNPPRV IDN +C A VI
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVI 52
>gi|326526393|dbj|BAJ97213.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 446
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++++ + DN+ T++++ V++ G+L +++ L D N+ + SD F
Sbjct: 255 MKKVQKATINFDNSLSPAHTLLQILCVDQKGLLYDMLRTLKDCNIKVTYGRFWSDKKGFR 314
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKK+ D E D ++ R+ ++ P V P E +E +G
Sbjct: 315 EVDLFIKQADGKKVIDPEKQDALRSRMRSEM-LHPLRVMIVNRGPDTELLVANPVELSGK 373
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 374 GRPRVFYDATLALKALGICIFSAEI 398
>gi|283781890|ref|YP_003372645.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
gi|283440343|gb|ADB18785.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
Length = 885
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV DNNT T++ V + ++ G+L + + L ++ L + A I + +DVF V
Sbjct: 795 PTRVSFDNNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVDVFYV 854
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
G KI D++ ++ I+ +L
Sbjct: 855 TTLGGAKIVDEKRLEEIRAKL 875
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKV-----DSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
+R+++P V + A+ V++ D + GI ++ L+ I A I++
Sbjct: 672 LRKLSPSDAVAWSKYQAERNVVEYAVGTYDQITP-GIFHKLTGALSSQRQQILSAEINTL 730
Query: 64 G-GWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLR-----------SS 107
G +D F V D D R +EV ++Q L T + P+ R S
Sbjct: 731 ADGLVLDRFYVQDRDYSGAPPENRRQEVCRALEQALTTASQGEPTFRRTWQDRSQATDSR 790
Query: 108 VGVMPT---------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+PT E T + DR GL + L +L +V A+I TH D+
Sbjct: 791 AQHLPTRVSFDNNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVD 850
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +VT G I D KRL I+ L +
Sbjct: 851 VFYVTTLG-GAKIVDEKRLEEIRAKLLAAI 879
>gi|197118260|ref|YP_002138687.1| GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
bemidjiensis Bem]
gi|197087620|gb|ACH38891.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter bemidjiensis Bem]
Length = 894
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T+ + + G+ I + R + + L
Sbjct: 717 DIPGLFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDL 776
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 243
VL G P I++ E+ + V RVE +
Sbjct: 777 RQVLEGKVKVSALVAKRHRPSILS---------------EKAKPTVPARVEIDN------ 815
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQ 873
Query: 304 PISSEAERERVIQCLEAAIE 323
I + + E + + L A++
Sbjct: 874 KIMNPGKLEEIRKELLDAVD 893
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 868 KDIFGQKIMNPGKLEEIRKEL 888
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + ++
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFIVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|386311543|ref|YP_006007599.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|318606932|emb|CBY28430.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 892
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFICCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDA-------SFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGER 855
>gi|397690541|ref|YP_006527795.1| UTP-GlnB uridylyltransferase, GlnD [Melioribacter roseus P3M]
gi|395812033|gb|AFN74782.1| UTP-GlnB uridylyltransferase, GlnD [Melioribacter roseus P3M]
Length = 852
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVT 163
++SV +TSI D L S +C L+ N+ +A+I+T D +VT
Sbjct: 654 KASVFFKEEAGYTSITVITRDSEALLSRLCGALSINDLNIHDAKIFTRKDGIVIDNFNVT 713
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
D T + D R IK L +L ++ + K ++
Sbjct: 714 DFRTNEVV-DKSRYDKIKSDL--ILAALNELQITK-----------------------EF 747
Query: 224 ERVEKAVGRVEDK--SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R++ R+E+K + +V ++ + D YT+I + S DR LL+ I + ++ ++
Sbjct: 748 NRIKSKWWRIENKLFKRKGKVKIVFEKHDRYTIIDVFSPDRLGLLYQITRKMNELGLSIY 807
Query: 281 HGMVNTGRTEAYQEFYI--RHVDGLPISSEAERERVIQCLEAAIE 323
+NT + FYI RH + S E E +IQ L IE
Sbjct: 808 FAKINTKADDIVDSFYILDRHKRKV---SANEYELIIQQLTETIE 849
>gi|238787238|ref|ZP_04631037.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238724500|gb|EEQ16141.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 892
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V+I T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFA-PSLR------------SSVGVMPT--EEH 116
++ DG + +D+ +I + Q+ T ++ P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIRHALQQAMTRTNYQHPRVRRLSSKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 20 DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDG 78
D AT + + + + + + L +NL I A I++ + +D + +++ G
Sbjct: 711 DERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIITAANQYTLDTYVIMEEGG 770
Query: 79 KKIRDKEVIDYIQQRLET---------DASFAPSLRSSVGVMPTEE----------HTSI 119
+ D+ I+ I ++L T D P R+ E T +
Sbjct: 771 AAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRVATEITLANDLDSRATVL 830
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
+ T DRPGL +E+ + + A+I T +RA V ++TD + G + DP+ +T
Sbjct: 831 DITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITD-TNGEMLHDPEFCAT 889
Query: 180 IKELL 184
+KE L
Sbjct: 890 LKERL 894
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 46/78 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
+ + N+ + ATV+ + ++++ G+L ++ ++ ++I+ A I++ G DVF + D
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 77 DGKKIRDKEVIDYIQQRL 94
+G+ + D E +++RL
Sbjct: 877 NGEMLHDPEFCATLKERL 894
>gi|421775131|ref|ZP_16211741.1| protein-P-II uridylyltransferase [Escherichia coli AD30]
gi|408459563|gb|EKJ83344.1| protein-P-II uridylyltransferase [Escherichia coli AD30]
Length = 890
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGRIFADLGISLHGARITTIGER 853
>gi|432711854|ref|ZP_19946908.1| [protein-PII] uridylyltransferase [Escherichia coli KTE8]
gi|431260398|gb|ELF52496.1| [protein-PII] uridylyltransferase [Escherichia coli KTE8]
Length = 890
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + E+I + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEIIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|386826231|ref|ZP_10113338.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
gi|386427115|gb|EIJ40943.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
Length = 899
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNVID 75
+V++ + +T V + + + ++ L + I AYI F M F+V++
Sbjct: 691 LVMERHNTQGSTEFTVFAHERDSLFAEITYFLEQQGITIVDAYIIPTQSEFTMAGFSVLE 750
Query: 76 CDGKKIRDKEVIDYIQQRL------ETDASFAPSLRS-----SVGVMPT---------EE 115
G +I D+E ++ I Q L +T F P R +PT +
Sbjct: 751 ESGAEIHDQERVEEILQALKDALSRDTSVPFYPINRRIPRQVKYFTVPTRITFTQDRGND 810
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E TDRPGL S + + + A I T R V +TD + + +
Sbjct: 811 HTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFITDRNN-HLLYSSD 869
Query: 176 RLSTIKELLFNVL 188
+L ++E L VL
Sbjct: 870 QLDALREELSMVL 882
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R+ + D T+++V + ++ G+L ++ Q + ++ +KKA I++ G DVF +
Sbjct: 798 PTRITFTQDRGNDHTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D + + + +D +++ L
Sbjct: 858 TDRNNHLLYSSDQLDALREEL 878
>gi|417142937|ref|ZP_11985318.1| protein-P-II uridylyltransferase [Escherichia coli 97.0259]
gi|417306695|ref|ZP_12093583.1| [Protein-PII] uridylyltransferase [Escherichia coli PCN033]
gi|432872709|ref|ZP_20092525.1| [protein-PII] uridylyltransferase [Escherichia coli KTE147]
gi|338771740|gb|EGP26472.1| [Protein-PII] uridylyltransferase [Escherichia coli PCN033]
gi|386154962|gb|EIH11320.1| protein-P-II uridylyltransferase [Escherichia coli 97.0259]
gi|431406054|gb|ELG89286.1| [protein-PII] uridylyltransferase [Escherichia coli KTE147]
Length = 890
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVSAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|238763982|ref|ZP_04624938.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697799|gb|EEP90560.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
Length = 892
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT--EEH 116
++ DG + R +I +QQ + P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRISPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGER 855
>gi|449533134|ref|XP_004173532.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like, partial [Cucumis sativus]
Length = 224
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 20/138 (14%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E++ + IQ E+ A A + ++ GV+P ++ H
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLA--MGAAFGVVPPKQQVDVDIATH 203
Query: 117 TSIEFTGTDRPGLFSEVC 134
+++ G DR L+ E
Sbjct: 204 INVQDDGPDRSLLYVETA 221
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TV++V ++ G+L ++ L+D++L I A++++ G +DVF V
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D GK++ ++ ++ RL +
Sbjct: 895 DLLGKQVINETRQATLRSRLRS 916
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD G + + R
Sbjct: 848 TVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTD-LLGKQVINETR 906
Query: 177 LSTIKELLFNVL 188
+T++ L ++L
Sbjct: 907 QATLRSRLRSIL 918
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 233 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
VE + P+V + N D TV+ + +DRP LL+++ L+D+ + V T +A
Sbjct: 828 VEAFTVEPEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKA 887
Query: 292 YQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 328
FY+ + G + +E R R+ L+ A + A+E
Sbjct: 888 VDVFYVTDLLGKQVINETRQATLRSRLRSILDPARPKSATE 928
>gi|329296138|ref|ZP_08253474.1| PII uridylyl-transferase [Plautia stali symbiont]
Length = 880
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 682 LSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 741
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 742 FIVLEPDGSPLAPDRHPLIIQALEQAITQTQWVPPRTRRPSSRLKHFSVDTEVNFLPTHT 801
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 802 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 843
>gi|345009603|ref|YP_004811957.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
gi|344035952|gb|AEM81677.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
Length = 871
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV + + ATVI+V + + G+L ++ + L + ++ A+
Sbjct: 769 YRKYPRRRGVHAPPPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEHTGVAVRSAHA 828
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
S+ G +D F V D G ++ + Q+
Sbjct: 829 STLGANAVDAFYVTDSSGAPLKPMHAAEVAQK 860
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSHEPPTALTR 897
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSRLQ 878
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLL 265
PQVT+ N ++ TV+ + + DRP LL
Sbjct: 802 ---------PQVTIHNDAQRPVTVLELSAPDRPGLL 828
>gi|238893163|ref|YP_002917897.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|330001644|ref|ZP_08304070.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|386033242|ref|YP_005953155.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|419975543|ref|ZP_14490952.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981409|ref|ZP_14496685.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986654|ref|ZP_14501784.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992331|ref|ZP_14507288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998633|ref|ZP_14513418.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004521|ref|ZP_14519157.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010288|ref|ZP_14524763.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016399|ref|ZP_14530691.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021806|ref|ZP_14535982.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027326|ref|ZP_14541320.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033248|ref|ZP_14547055.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038706|ref|ZP_14552350.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044836|ref|ZP_14558312.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050742|ref|ZP_14564038.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056029|ref|ZP_14569190.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420060976|ref|ZP_14573970.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067686|ref|ZP_14580476.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072904|ref|ZP_14585537.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078757|ref|ZP_14591211.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|424829043|ref|ZP_18253771.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078298|ref|ZP_18481401.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079945|ref|ZP_18483042.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088930|ref|ZP_18492023.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090064|ref|ZP_18493149.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428931636|ref|ZP_19005229.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|428940394|ref|ZP_19013479.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|449058387|ref|ZP_21736596.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
gi|238545479|dbj|BAH61830.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328537586|gb|EGF63806.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|339760370|gb|AEJ96590.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|397342764|gb|EJJ35920.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397343243|gb|EJJ36392.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397347338|gb|EJJ40446.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397359874|gb|EJJ52561.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397361256|gb|EJJ53921.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397365516|gb|EJJ58139.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374980|gb|EJJ67288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397379053|gb|EJJ71253.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386391|gb|EJJ78474.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393624|gb|EJJ85377.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397395588|gb|EJJ87293.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403997|gb|EJJ95529.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397410579|gb|EJK01856.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397411053|gb|EJK02318.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421045|gb|EJK12081.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427733|gb|EJK18495.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397432077|gb|EJK22742.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438573|gb|EJK29065.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444465|gb|EJK34740.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|405590159|gb|EKB63693.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405600068|gb|EKB73235.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405606870|gb|EKB79840.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405614628|gb|EKB87327.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|414706460|emb|CCN28164.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302350|gb|EKV64555.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|426307908|gb|EKV69981.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|448875381|gb|EMB10400.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
Length = 887
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|365142822|ref|ZP_09347861.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
gi|363651116|gb|EHL90197.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
Length = 887
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|262044764|ref|ZP_06017810.1| uridylyltransferase, partial [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037876|gb|EEW39101.1| uridylyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 230
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 32 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 91
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 92 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 150
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 151 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 193
>gi|413917416|gb|AFW57348.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 165
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVI 30
DDEY K I+ MNPPRV IDN +C A VI
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVI 52
>gi|378977073|ref|YP_005225214.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402782334|ref|YP_006637880.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|421913573|ref|ZP_16343250.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421919192|ref|ZP_16348698.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|428148700|ref|ZP_18996553.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|364516484|gb|AEW59612.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402543196|gb|AFQ67345.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|410112518|emb|CCM85875.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410118484|emb|CCM91323.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|427541341|emb|CCM92691.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 867
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 669 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 728
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 729 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 787
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 788 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 830
>gi|152968761|ref|YP_001333870.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|424935000|ref|ZP_18353372.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|150953610|gb|ABR75640.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|407809187|gb|EKF80438.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 887
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|49393|emb|CAA79887.1| PII Uridylyl-transferase [Escherichia coli]
Length = 890
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQRTRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419761889|ref|ZP_14288140.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397745430|gb|EJK92637.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 887
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|238009308|gb|ACR35689.1| unknown [Zea mays]
Length = 155
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVI 30
DDEY K I+ MNPPRV IDN +C A VI
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVI 52
>gi|187608845|sp|P83643.2|UP12_ORYSI RecName: Full=Unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic; Flags: Precursor
gi|187663980|sp|Q0J709.2|UP12_ORYSJ RecName: Full=Unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic; Flags: Precursor
Length = 283
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D G + +
Sbjct: 77 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 136
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
G+KI + E+++ ++ + +AS +L ++ G P E ++
Sbjct: 137 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 196
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 197 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVS----- 251
Query: 169 YAIKDPKRLSTIKELLFNVLR 189
+ + ++++L N LR
Sbjct: 252 --YRGKPLIKALQQVLANSLR 270
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 34/190 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L +L NVV A + + + +T STG I +P+
Sbjct: 90 TIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPEL 149
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS------PPG-IMNRERRLHQIMFDDRDYERVEKA 229
L ++ + N + Y ++ +L PP +++ + H ++DD
Sbjct: 150 LEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHIDIYDDG-------- 201
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
D +++ + + DRP LL D+V + D+ V G +T
Sbjct: 202 -------------------PDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGL 242
Query: 290 EAYQEFYIRH 299
A +F++ +
Sbjct: 243 LAKAKFHVSY 252
>gi|218195969|gb|EEC78396.1| hypothetical protein OsI_18182 [Oryza sativa Indica Group]
Length = 457
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++R+ + DN T+++++ ++ G+L +++ + D ++ + SD F
Sbjct: 252 MKRVQKATINFDNTLSPAHTLLQINCADQKGLLYDILRTMKDCSIQVTYGRFWSDKKGFR 311
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKKI D E D + RL ++ P V P E +E +G
Sbjct: 312 EVDLFIKQADGKKIIDPEKQDVLSSRLRSEM-LHPLRVMIVNRGPDVELLVANPVELSGK 370
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 371 GRPRVFYDATFALKALGICIFSAEI 395
>gi|441145462|ref|ZP_20963771.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440621082|gb|ELQ84103.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 749
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 2 DDEYAKLIR--RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAY 59
+ YA+ R + PPRV + + ATVI+V + + G+L ++ + L + ++ A+
Sbjct: 650 EQAYARRSRGVQAPPPRVTVAPGSSQSATVIEVRAQDAQGLLHRIGRALEAAGVTVRSAH 709
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+S+ G +D F V G+ + D + Q
Sbjct: 710 VSTLGANAVDAFYVTTEKGEPLPDAAATEVAQ 741
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + ++
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFIVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|378578214|ref|ZP_09826894.1| uridylyltransferase/uridylyl-removing enzyme [Pantoea stewartii
subsp. stewartii DC283]
gi|377819323|gb|EHU02403.1| uridylyltransferase/uridylyl-removing enzyme [Pantoea stewartii
subsp. stewartii DC283]
Length = 882
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LRKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + R +I ++Q + T + + P S+ + V +PT
Sbjct: 744 FIVLEPDGSPLAPDRHALIIQALEQAI-TQSDWVPPRTRRQAARLRHFSVDTEVNFLPTH 802
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|222640166|gb|EEE68298.1| hypothetical protein OsJ_26556 [Oryza sativa Japonica Group]
Length = 280
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D G + +
Sbjct: 74 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 133
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
G+KI + E+++ ++ + +AS +L ++ G P E H
Sbjct: 134 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 193
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
I G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 194 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVS----- 248
Query: 169 YAIKDPKRLSTIKELLFNVLR 189
+ + ++++L N LR
Sbjct: 249 --YRGKPLIKALQQVLANSLR 267
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 34/190 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L +L NVV A + + + +T STG I +P+
Sbjct: 87 TIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPEL 146
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS------PPG-IMNRERRLHQIMFDDRDYERVEKA 229
L ++ + N + Y ++ +L PP +++ + H ++DD
Sbjct: 147 LEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHIDIYDD--------- 197
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
D +++ + + DRP LL D+V + D+ V G +T
Sbjct: 198 ------------------GPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGL 239
Query: 290 EAYQEFYIRH 299
A +F++ +
Sbjct: 240 LAKAKFHVSY 249
>gi|269101937|ref|ZP_06154634.1| [Protein-PII] uridylyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161835|gb|EEZ40331.1| [Protein-PII] uridylyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 873
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S +K + V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLILISKKPTRGGTEVFVYSKDKAKLFAIVVAELDKKNLSVHDAQIMNSKDGYTLDTFMV 739
Query: 74 IDCDGKKIRDKE--VIDYIQQRLETDASFAP------------SLRSSVGVMPTE--EHT 117
+D +GK I + VI ++ T+ F ++++ V + T+ + T
Sbjct: 740 LDPNGKAISENRHAVISKALKKALTEMKFERKKRRTRRQLLHFNVKTRVDFLATKNGKKT 799
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+E D PGL + V +V A+ + ++ A+I T +RA
Sbjct: 800 MVELVALDTPGLLATVGSVFANQNLSLQAAKITTIGERA 838
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|255074903|ref|XP_002501126.1| predicted protein [Micromonas sp. RCC299]
gi|226516389|gb|ACO62384.1| predicted protein [Micromonas sp. RCC299]
Length = 246
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 42/218 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN + ATV+ V + G LL ++ L + L + +A ++ D + F V
Sbjct: 34 PVVLIDNRSDPLATVVSVQFSDVLGQLLDTVESLKALGLNVSRAEVTGDENP--NKFYVT 91
Query: 75 DC-DGKKIRDKEVIDYI---------------QQRLETDASFAPSLR----SSVGVMP-- 112
D +K+ E I+ I +Q E P R + +G P
Sbjct: 92 DAATSEKVVKSEQIENIRMAIINNMLYYHPESKQYFEGGTVDMPGNRDVDANPLGARPRG 151
Query: 113 -TEEHTSIEFTGT----------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+IE G DRPGL ++ L DL NVV+AEI T +A+ V+
Sbjct: 152 KVATKVTIEAMGAARSRLIVETADRPGLLVDIVRTLKDLSLNVVSAEIDTIGPKASDTVY 211
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+T G A+ ++ EL+ N L Y ++ +T
Sbjct: 212 LTYR--GAALN-----PSMNELVVNALTYYLSKKEVET 242
>gi|124360724|gb|ABN08701.1| Amino acid-binding ACT [Medicago truncatula]
Length = 328
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDG 78
++N+T ++T + + NK G+L + +V + L I KA + +G +F F V D G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 79 KKIRDKEVIDYIQQRL 94
KI D E ++ I++ L
Sbjct: 113 NKIEDDENLERIKRAL 128
>gi|288937051|ref|YP_003441110.1| UTP-GlnB uridylyltransferase, GlnD [Klebsiella variicola At-22]
gi|290512472|ref|ZP_06551838.1| protein-P-II uridylyltransferase [Klebsiella sp. 1_1_55]
gi|288891760|gb|ADC60078.1| UTP-GlnB uridylyltransferase, GlnD [Klebsiella variicola At-22]
gi|289774813|gb|EFD82815.1| protein-P-II uridylyltransferase [Klebsiella sp. 1_1_55]
Length = 887
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + D I+ LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|218200735|gb|EEC83162.1| hypothetical protein OsI_28383 [Oryza sativa Indica Group]
Length = 280
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D G + +
Sbjct: 74 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 133
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
G+KI + E+++ ++ + +AS +L ++ G P E H
Sbjct: 134 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 193
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
I G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 194 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVS----- 248
Query: 169 YAIKDPKRLSTIKELLFNVLR 189
+ + ++++L N LR
Sbjct: 249 --YRGKPLIKALQQVLANSLR 267
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 34/190 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L +L NVV A + + + +T STG I +P+
Sbjct: 87 TIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPEL 146
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS------PPG-IMNRERRLHQIMFDDRDYERVEKA 229
L ++ + N + Y ++ +L PP +++ + H ++DD
Sbjct: 147 LEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHIDIYDD--------- 197
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
D +++ + + DRP LL D+V + D+ V G +T
Sbjct: 198 ------------------GPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGL 239
Query: 290 EAYQEFYIRH 299
A +F++ +
Sbjct: 240 LAKAKFHVSY 249
>gi|206579824|ref|YP_002240345.1| PII uridylyl-transferase [Klebsiella pneumoniae 342]
gi|206568882|gb|ACI10658.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae 342]
Length = 887
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + D I+ LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|271963324|ref|YP_003337520.1| (protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
gi|270506499|gb|ACZ84777.1| (Protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
Length = 761
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
+ PPRV + ++ ATV++V + ++ G+L ++ + D L ++ A + + G +DVF
Sbjct: 674 VAPPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVF 733
Query: 72 NVIDCDGKKIRDK 84
V+D G+ + D+
Sbjct: 734 YVVDRAGRPLTDE 746
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+VT+++ TV+ +R+ DRP LL+ I D V V T EA FY+
Sbjct: 677 PRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVFYVV 736
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
G P++ EA+R +V + AA+
Sbjct: 737 DRAGRPLTDEAQRAQVRDQVLAAL 760
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + +
Sbjct: 720 ITAQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|226494031|ref|NP_001150201.1| LOC100283831 [Zea mays]
gi|195637534|gb|ACG38235.1| amino acid binding protein [Zea mays]
gi|414589018|tpg|DAA39589.1| TPA: amino acid binding protein [Zea mays]
Length = 433
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L V++++ D N+ I + Y S +G +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAV- 313
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 314 QSDGKKILDQHRQRALCCRLRMELR-RPLHVALVNRGPDTELLVANPVEVSGKGRPLVFY 372
Query: 132 EVCAVLADLHCNVVNAEIWTH 152
++ L +L + AEI H
Sbjct: 373 DITLALKNLQRRIFLAEIGRH 393
>gi|330445143|ref|ZP_08308795.1| protein-P-II uridylyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489334|dbj|GAA03292.1| protein-P-II uridylyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 873
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P +++ T + V S +K + V+ L+ NL + A I +S G+ +D F V
Sbjct: 681 PLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKDGYTLDTFMV 740
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLR---------------SSVGVMPTE--EH 116
+D +GK I + I++ L + S R + V +PT+ +
Sbjct: 741 LDPNGKAINENRHTT-IRRALTKALTVMKSERKIRRAPRKLLHFNVPTEVSFLPTKTGKK 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
T +E D PGL ++V +V A+ + ++ A+I T +RA
Sbjct: 800 TMMELVALDMPGLLAKVGSVFAEHNVSLQAAKITTIGERA 839
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 71 FNVIDCDGKKIRDKEVI----------------DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D +G I D V DY I++R+ +FAP + ++
Sbjct: 749 YIVLDNEGGSIGDNPVRVQEIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP+ S ++E + L
Sbjct: 866 HPLSDPQLCSRLQEAIIKQL 885
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPVRVQEIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNHPLS 869
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + D ++ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSRLQE 879
>gi|114797974|ref|YP_759248.1| PII uridylyl-transferase [Hyphomonas neptunium ATCC 15444]
gi|114738148|gb|ABI76273.1| protein-P-II uridylyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 947
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD 83
A + V ++ G+ + L + I A + +S GG +DVF + D G +
Sbjct: 740 GGAVALLVSGKDRTGLFADLAGTLARLGANIVAAQVFTSKGGRIVDVFMLQDARGLPYGE 799
Query: 84 KE---VIDYIQQRLETDASFAPS--LRSSVG-------VMPTE--------EHTSIEFTG 123
+ + Q L PS ++S G V P+ EH I+
Sbjct: 800 GDGPRLAKLEQAILGALGGTVPSGSVKSRAGRREAAFLVQPSVQIHEEVSIEHMVIDVAA 859
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL EV VLAD+ ++ +A + ++ +R +V S I ++ ++E
Sbjct: 860 RDRPGLLHEVAEVLADMKLSIHSAHVGSYGERVFDAFYVKPGSPSGKISKARK-EALRER 918
Query: 184 LFNVL 188
LF VL
Sbjct: 919 LFAVL 923
>gi|242086641|ref|XP_002439153.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
gi|241944438|gb|EES17583.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
Length = 447
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 130/303 (42%), Gaps = 43/303 (14%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID-CDGKKIRD 83
+ TVI V+ ++ G+ + + + + L I + +S+DG W VF V+ KIR
Sbjct: 42 GEETVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSSIKIRW 101
Query: 84 KEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + + S F P + S G P++ + ++ DR GL +V +L+DL
Sbjct: 102 ASLKNRLMSMCPSSYSIPFYPDI-SQPG--PSQYYL-LKLLSPDRKGLLHDVTHILSDLE 157
Query: 142 CNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKR------LSTIKELLFNVLRGYDDF 194
+ ++ T D R + +TD K+ + ++T+ + + + F
Sbjct: 158 LIIHRVKVCTTPDGRVVDLFFITDGMELLHKKERQEETCSTLIATLGPSISCEVLSAEGF 217
Query: 195 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS-----SRPQVTVLNIEK 249
++ +SL P ++ + +F RVE A + S + Q +N +
Sbjct: 218 QQGFSSLPP--------KIAEELF------RVELADSEICSSSLSVELKKVQTATINFDN 263
Query: 250 D----YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ------EFYIRH 299
+T++ + D+ L++DI+ T+ D +F+G + + + + +++
Sbjct: 264 SLSPAHTLVQIICADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSVSKGCREVDLFVKQ 323
Query: 300 VDG 302
VDG
Sbjct: 324 VDG 326
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD----- 63
++++ + DN+ T++++ ++ G++ +++ + D N+ I SD
Sbjct: 251 LKKVQTATINFDNSLSPAHTLVQIICADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSV 310
Query: 64 --GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTS 118
G +D+F V DGKK+ D E D ++ RL ++ P V P E
Sbjct: 311 SKGCREVDLF-VKQVDGKKVMDPEKQDALRSRLRSEM-LHPLRVMIVSRGPDTELLVANP 368
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
+E +G RP +F + L L + +AEI
Sbjct: 369 VELSGKGRPRVFYDATLALKALGICIFSAEI 399
>gi|271499493|ref|YP_003332518.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech586]
gi|270343048|gb|ACZ75813.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech586]
Length = 894
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 697 PMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT--EEH 116
++ DG + R + I+Q L P +R + V +PT +
Sbjct: 757 LEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVSFLPTHTDRR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 817 SYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGER 855
>gi|222629957|gb|EEE62089.1| hypothetical protein OsJ_16873 [Oryza sativa Japonica Group]
Length = 443
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++R+ + DN T+++++ ++ G+L +++ + D ++ + SD F
Sbjct: 252 MKRVQKATINFDNTLSPAHTLLQINCADQKGLLYDILRTMKDCSIQVTYGRFWSDKKGFR 311
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKKI D E D + RL ++ P V P E +E +G
Sbjct: 312 EVDLFIKQADGKKIIDPEKQDVLSSRLRSEM-LHPLRVMIVNRGPDVELLVANPVELSGK 370
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 371 GRPRVFYDATFALKALGICIFSAEI 395
>gi|425298339|ref|ZP_18688397.1| protein-P-II uridylyltransferase [Escherichia coli 07798]
gi|408222086|gb|EKI45993.1| protein-P-II uridylyltransferase [Escherichia coli 07798]
Length = 890
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ + I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGSRITTIGER 853
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPTRVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|90413527|ref|ZP_01221518.1| PII uridylyl-transferase [Photobacterium profundum 3TCK]
gi|90325459|gb|EAS41942.1| PII uridylyl-transferase [Photobacterium profundum 3TCK]
Length = 874
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V + +K + V+ L+ NL + A I +S
Sbjct: 673 ALLTHDHDKPLILLSKKATRGGTEVFVYNKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 732
Query: 65 GWFMDVFNVIDCDGKKI--------RDKEVIDYIQQRLETDASFAP------SLRSSVGV 110
G+ +D F V+D G+ I R V + + E AP ++++ V
Sbjct: 733 GYTLDTFMVLDPSGQAIPENRHNTIRRALVNALTKMKSERKNKRAPRKLMHFNVKTQVDF 792
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T++E D PGL + + AV A ++ A+I T +RA
Sbjct: 793 LPTKTGKKTTMELIALDTPGLLARIGAVFAKQKVSLQAAKITTIGERA 840
>gi|345849786|ref|ZP_08802793.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
gi|345638767|gb|EGX60267.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
Length = 815
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D + ++ A+ + G +D F V
Sbjct: 730 PPRVSVHPAASRQATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYV 789
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
+G + +E + ++ ET
Sbjct: 790 TGPEGAPLPGEEAVSVARKLEET 812
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
PQV + TV+ +R+ DR +LF IV L++++ V +V T + FY++
Sbjct: 683 PQVIFDDGLGSTTVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQE 742
Query: 300 VDGLPISSEAERERVIQCLEAAI 322
DG P++ + R + + + AA+
Sbjct: 743 ADGRPVADDTRRREIARAVLAAL 765
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
PP+V+ D+ TV++V + ++ G+L ++++ L+++ L + A +++ G +D F
Sbjct: 681 GPPQVIFDDG-LGSTTVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFY 739
Query: 73 VIDCDGKKIRD 83
V + DG+ + D
Sbjct: 740 VQEADGRPVAD 750
>gi|302558147|ref|ZP_07310489.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475765|gb|EFL38858.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
Length = 823
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D + ++ A++S+ G +D F V
Sbjct: 738 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 797
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
G + +E + ++ ET
Sbjct: 798 TQEQGVPLPGEEAVAVARKLEET 820
>gi|354598884|ref|ZP_09016901.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
gi|353676819|gb|EHD22852.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
Length = 894
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + ++ + V L+ NL + A I +S G MD F V
Sbjct: 696 PLVLISHQASRGGTEIFIRCQDRPYLFATVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 755
Query: 74 IDCDGKKI-RDK-EVIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ E Y ++ T + +P LR + V +PT +
Sbjct: 756 LEPDGSPLAQDRHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSFLPTHTDRR 815
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ +E + D+PGL + + + ADL+ ++ A I T +R
Sbjct: 816 SYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGER 854
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 40/206 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN ATV+ V+ K+ LL + L ++ L I++A IS DG VF +
Sbjct: 67 PTVKIDNVVDPFATVLTVEFGEKNVELLDAVSALKNLGLNIRRATIS-DGST---VFYIT 122
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSS------VGVMPTEEHTS 118
D D +KI ++ I+ + E +FA ++ +G T+
Sbjct: 123 DADTSEKIVKSARLEDIRMTILNSLVDKFPEVGEAFASGSKTDSEPNKVLGTRRRVVQTT 182
Query: 119 IEFT-------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
I+ T +DRPGL ++ VL D++ NVV+AEI T A +T H
Sbjct: 183 IDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAKDEFFITYH 242
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGY 191
G + P + L+ N L+ Y
Sbjct: 243 --GEPLNSP-----MVTLVTNALQYY 261
>gi|145641019|ref|ZP_01796600.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|145274180|gb|EDK14045.1| PII uridylyl-transferase [Haemophilus influenzae 22.4-21]
Length = 131
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 30/120 (25%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 14 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSITPNRQ 66
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 67 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 126
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 35/201 (17%)
Query: 115 EHTSIEFTGT--------DRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDH 165
E TS EF G D P +F+ V LA + N+ +A +++ N A +V D
Sbjct: 700 ETTSHEFEGATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDD 759
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
+ DP R I+E + LR +R + +P R+L Q R Y
Sbjct: 760 NFQPIGDDPARSEKIRESVLEELRLVSGYRDVVSRRTP-------RQLKQFAVPTRTYIS 812
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
+ G +TV+ + S DRP LL I DM + + ++
Sbjct: 813 NDIVSG-------------------HTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKIS 853
Query: 286 TGRTEAYQEFYIRHVDGLPIS 306
T F+I ++G P+S
Sbjct: 854 TLGERVEDIFFISDIEGNPLS 874
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R I N+ + TV++V S ++ G+L + +V D+++ ++ A IS+ G D+F +
Sbjct: 806 PTRTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFI 865
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDAS 99
D +G + D KE+ + R+E D +
Sbjct: 866 SDIEGNPLSDPNLCAELQKEICKQLDLRVEKDLA 899
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKI---- 81
AT I V + + V L NL I+ A + S+ G+ D F V+D + + I
Sbjct: 709 ATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDDNFQPIGDDP 768
Query: 82 -RDKEVIDYIQQRLETDAS---------------FAPSLRSSVGVMPTEEHTSIEFTGTD 125
R +++ + + + L + FA R+ + HT +E D
Sbjct: 769 ARSEKIRESVLEELRLVSGYRDVVSRRTPRQLKQFAVPTRTYISNDIVSGHTVLEVISPD 828
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
RPGL + + V D+ + NA+I T +R + ++D G + DP + +++
Sbjct: 829 RPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISD-IEGNPLSDPNLCAELQK 884
>gi|209695853|ref|YP_002263783.1| PII uridylyl-transferase [Aliivibrio salmonicida LFI1238]
gi|208009806|emb|CAQ80113.1| [protein-PII] uridylyltransferase [Aliivibrio salmonicida LFI1238]
Length = 883
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
++I N T I V S ++ + V L+ ++ I A I SS G+ +D F V+D
Sbjct: 691 ILISKNATRGGTEIFVYSKDQAHLFATVAAELDRRSITIYDAQIMSSKDGYALDTFIVLD 750
Query: 76 CDGKKI---RDKEVIDYIQQ-RLETDASF-----AP------SLRSSVGVMPTE--EHTS 118
+ I R + +ID + LET + P ++++ + +PT+ + T
Sbjct: 751 QNDDPIDEERQQLLIDQLYAVELETQDTHIRTRRPPRQLQHFTVKTRMEFLPTKTGKRTL 810
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+EF D PGL + V A A L N+ A+I T +RA + +T TG + D K+
Sbjct: 811 MEFVALDTPGLLATVGATFARLGVNLHAAKITTIGERAEDLFILTS-ETGGRLDDEKQAE 869
Query: 179 TIKELLFNV 187
L+ NV
Sbjct: 870 LKIALIKNV 878
>gi|170727622|ref|YP_001761648.1| PII uridylyl-transferase [Shewanella woodyi ATCC 51908]
gi|169812969|gb|ACA87553.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella woodyi ATCC 51908]
Length = 859
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P V+I +T T + + +K + V+ VL++ N+ + A + +S
Sbjct: 654 AILKHKQTEPLVLISKHTTRGGTELFIYGQDKPKLFATVMAVLDNKNIDVHDATVMASKD 713
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--------------------------ETDA 98
G+ +D F +++ DG + I +++ L T
Sbjct: 714 GYVLDSFVILEQDGTPVSQISRIQSLRKALIKALNSDTAKLPKFKKLSRQMKPFNVPTRV 773
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
SF PS RSS +M E D PGL ++V +L ++ A+I T +RA
Sbjct: 774 SFLPSRRSSTSMM--------ELIALDSPGLLAKVGDILYRCQIRLLAAKITTIGERA 823
>gi|262196341|ref|YP_003267550.1| UTP-GlnB uridylyltransferase, GlnD [Haliangium ochraceum DSM 14365]
gi|262079688|gb|ACY15657.1| UTP-GlnB uridylyltransferase, GlnD [Haliangium ochraceum DSM 14365]
Length = 916
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDG 78
IDN+ ADATVI V + ++ G+L + + L+D L I + +S+ G D+F V+
Sbjct: 833 IDNSASADATVIDVLTQDRVGVLHAISRTLSDFGLDIHLSKVSTQGEQVADIFYVVSTST 892
Query: 79 -KKIRDKEVIDYIQQRLE 95
+K+ D I ++ RL+
Sbjct: 893 QRKLEDDSAIADLELRLQ 910
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSKKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|326443718|ref|ZP_08218452.1| PII uridylyl-transferase [Streptomyces clavuligerus ATCC 27064]
Length = 939
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V +D DATVI+V + + G+L ++ Q L + ++ A++S+ G +D F V
Sbjct: 858 VTVDPAASRDATVIEVRAQDAPGLLHRIGQALETAGVRVRSAHVSTLGAHAVDAFYVTGA 917
Query: 77 DGKKIRD---KEVIDYIQQRL 94
DG ++ + +E+ D +++ L
Sbjct: 918 DGLRLPEDTARELADRLERTL 938
>gi|383936728|ref|ZP_09990149.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
gi|383702156|dbj|GAB60240.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
Length = 874
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D+P LF+ + A L N+ +A+I T+ D A V G A+
Sbjct: 686 PIRGGTQVFIYTKDQPKLFARLVAALDSKKVNIFDAQIMTNKDGYAMDTFVILEQNGEAV 745
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLS 202
P R +IK L + G D + KT LS
Sbjct: 746 NSPSRQQSIKRALELYIAGKPDLSRQKTKLS 776
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG- 64
++R NP P V+I T + + + ++ + +++ L+ + I A I ++
Sbjct: 669 ILRHKNPDEPLVLISKAPIRGGTQVFIYTKDQPKLFARLVAALDSKKVNIFDAQIMTNKD 728
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----------------V 108
G+ MD F +++ +G+ + I++ LE + P L V
Sbjct: 729 GYAMDTFVILEQNGEAVNSPSRQQSIKRALELYIAGKPDLSRQKTKLSRQMRQFNVPPKV 788
Query: 109 GVMP--TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+P T + T IE D PGL + + V N+ A+I T +RA
Sbjct: 789 VFLPGNTSKRTMIELAALDTPGLLANIGEVFQRCDVNIHAAKITTIGERA 838
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 102 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 161
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 162 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 200
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 201 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 252
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 253 RVEDVFFITDANNHPLS 269
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 89 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 148
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 149 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 205
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 206 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 264
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 265 NHPLSDPQLCRQLQDAIVKQLSVNSEQGGD 294
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 181 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 240
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 241 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGGDLRISI 299
>gi|223939705|ref|ZP_03631578.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
gi|223891662|gb|EEF58150.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
Length = 925
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P ++ DN T T I+V++ ++ G+L + + L ++ L I A I ++ G +D F V
Sbjct: 838 PTQLHFDNETSESRTAIEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ DG KI D ++++++
Sbjct: 898 NELDGSKILDPGRQSFVERKI 918
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 32/200 (16%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYA 170
P +T + DR GLFS + + N++ A+++T +D +VTD TG A
Sbjct: 732 PDRGYTVAKICTWDRAGLFSNIAGSFSAAGLNILTAQVFTRSDAIVLDTFYVTDARTG-A 790
Query: 171 IKDPKRLSTIKELLFNVLRGYD-DFRK--AKTSLSPPGIMNRE--RRLHQIMFDDRDYER 225
+ + + ++ELL VL G + +FR AK ++ P + E + Q+ FD+
Sbjct: 791 LANREEKEKLEELLNKVLTGDEVNFRALIAKQRVNRPLYQSYEGDQMPTQLHFDN----- 845
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
E SR T I + ++DR LL+ I L +++ + +
Sbjct: 846 --------ETSESR------------TAIEVETEDRIGLLYAISEALAELELNISAAKIV 885
Query: 286 TGRTEAYQEFYIRHVDGLPI 305
T + A FY+ +DG I
Sbjct: 886 TEKGAAIDTFYVNELDGSKI 905
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D ++ ++ A++S+ G +D F V
Sbjct: 730 PPRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYV 789
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
+G + +E ++ ET
Sbjct: 790 TGPEGAPLPSEEAASVARKLEET 812
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + SL+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITEFNG------ELVEFDRRR-ELEQALTVSLQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PG+ ++V + ++L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|416895514|ref|ZP_11925415.1| protein-P-II uridylyltransferase [Escherichia coli STEC_7v]
gi|417112331|ref|ZP_11964454.1| protein-P-II uridylyltransferase [Escherichia coli 1.2741]
gi|422802518|ref|ZP_16851011.1| protein-P-II uridylyltransferase [Escherichia coli M863]
gi|323964941|gb|EGB60407.1| protein-P-II uridylyltransferase [Escherichia coli M863]
gi|327255145|gb|EGE66748.1| protein-P-II uridylyltransferase [Escherichia coli STEC_7v]
gi|386143115|gb|EIG84251.1| protein-P-II uridylyltransferase [Escherichia coli 1.2741]
Length = 890
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + +VI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHDVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|82775557|ref|YP_401904.1| PII uridylyl-transferase [Shigella dysenteriae Sd197]
gi|309787161|ref|ZP_07681773.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1617]
gi|91206756|sp|Q32JU2.1|GLND_SHIDS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81239705|gb|ABB60415.1| protein PII [Shigella dysenteriae Sd197]
gi|308924739|gb|EFP70234.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1617]
Length = 890
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + ++ D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLDLIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|343518734|ref|ZP_08755723.1| ACT domain protein [Haemophilus pittmaniae HK 85]
gi|343393398|gb|EGV05954.1| ACT domain protein [Haemophilus pittmaniae HK 85]
Length = 124
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + ADL N+ NA+I T ++A +T+ + G A+
Sbjct: 52 EHTELELVALDKPGLLAQISQIFADLALNLRNAKITTVGEKAEDFFILTN-AQGQALSAE 110
Query: 175 KRLSTIKELLFNVL 188
+R + ++L+ L
Sbjct: 111 ER-QQLADVLYRAL 123
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDP 174
+ DP
Sbjct: 866 QPLSDP 871
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD 83
++ A I++ G DVF + D + + + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSD 870
>gi|404254714|ref|ZP_10958682.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26621]
Length = 914
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L Q+ L + I A++++ G +D F +
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 881
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G+KI + I++RL + A+
Sbjct: 882 DLTGEKIGAGSRLRTIERRLLSAAA 906
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLN--DVNLVIKKAYISSDGGWFMDVFNV-------IDCD 77
AT++ V + + G+ ++ ++ N++ + + + DG +D F V D D
Sbjct: 723 ATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDG-MALDNFLVQDPVGRPFDED 781
Query: 78 GKKIRDKEVI-DYIQQRLE-TDASFA-PSLRSSVGVMP-----------TEEHTSIEFTG 123
G+ +R K+ I D + R++ D A P R+ P + T IE
Sbjct: 782 GQLLRLKKAIEDALANRVKLVDRLLAKPLPRTRAEAFPIAPNVLIDNKASNRFTVIEVNA 841
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRP L ++ L + +A + T+ +RA ++TD TG I RL TI+
Sbjct: 842 RDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLTD-LTGEKIGAGSRLRTIERR 900
Query: 184 LFNVLRG 190
L + G
Sbjct: 901 LLSAAAG 907
>gi|308048667|ref|YP_003912233.1| UTP-GlnB uridylyltransferase, GlnD [Ferrimonas balearica DSM 9799]
gi|307630857|gb|ADN75159.1| UTP-GlnB uridylyltransferase, GlnD [Ferrimonas balearica DSM 9799]
Length = 858
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 46/258 (17%)
Query: 85 EVIDYIQQRLETD--ASFAPS----------------LRSSVGVMPTEEHTSIEFTGTDR 126
E ID + QRL D F+P+ + + T T + G DR
Sbjct: 626 EQIDALWQRLSADYFLRFSPAQIQWHSEMLLGRDLEAYQVHLSTHVTRGGTELLVYGPDR 685
Query: 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186
PGLF+ V A L +V +A+I+T D A V G+ I+DP R++ ++ L
Sbjct: 686 PGLFAMVMAQLDAKRVSVHDAQIFTTRDGYALDSFVILEHDGHPIQDPSRINRLRHSLNT 745
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
L K +L+ + R+L R + RV+ SS+
Sbjct: 746 AL--------TKGTLTARPLRPLSRKL-----------RSFRVPTRVQFLSSQ------- 779
Query: 247 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 306
K+ T++ + + DRP LL I + + + T +A F + + +G +S
Sbjct: 780 -RKNCTMMELVTLDRPGLLAQIAQVFDRCELSIQAAKITTVGEKAEDFFMLCNPEGQALS 838
Query: 307 SEAERERVIQCLEAAIER 324
AE++ + + L A+E+
Sbjct: 839 P-AEQDTLSRALVGALEQ 855
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,971,825,698
Number of Sequences: 23463169
Number of extensions: 201021015
Number of successful extensions: 477819
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 825
Number of HSP's that attempted gapping in prelim test: 472761
Number of HSP's gapped (non-prelim): 4213
length of query: 329
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 187
effective length of database: 9,027,425,369
effective search space: 1688128544003
effective search space used: 1688128544003
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)