Query 020194
Match_columns 329
No_of_seqs 268 out of 1987
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:13:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 2.5E-18 8.6E-23 149.4 13.8 160 115-324 4-165 (195)
2 2nyi_A Unknown protein; protei 99.8 7.6E-18 2.6E-22 146.3 16.0 154 26-188 4-163 (195)
3 1u8s_A Glycine cleavage system 99.8 3E-17 1E-21 142.1 16.8 160 115-324 5-168 (192)
4 1u8s_A Glycine cleavage system 99.7 3.9E-16 1.3E-20 135.1 15.7 155 27-188 6-166 (192)
5 3p96_A Phosphoserine phosphata 99.0 4.1E-08 1.4E-12 94.2 19.6 140 115-300 11-151 (415)
6 3p96_A Phosphoserine phosphata 98.9 3.8E-08 1.3E-12 94.4 18.7 133 26-164 11-150 (415)
7 2f06_A Conserved hypothetical 98.6 3E-06 1E-10 69.1 16.3 111 27-160 6-116 (144)
8 2f06_A Conserved hypothetical 98.4 1.6E-05 5.3E-10 64.8 16.0 113 116-297 6-118 (144)
9 1zpv_A ACT domain protein; str 98.3 6.3E-06 2.2E-10 61.5 9.8 65 115-186 4-68 (91)
10 1zpv_A ACT domain protein; str 98.2 9.5E-06 3.2E-10 60.5 10.5 65 26-92 4-68 (91)
11 2ko1_A CTR148A, GTP pyrophosph 98.1 1.3E-05 4.3E-10 59.2 9.1 64 250-319 4-67 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 5.7E-05 2E-09 55.6 9.4 49 116-164 5-53 (88)
13 3obi_A Formyltetrahydrofolate 97.8 0.0011 3.7E-08 60.3 17.5 117 27-151 6-124 (288)
14 2re1_A Aspartokinase, alpha an 97.8 0.00022 7.4E-09 59.6 11.5 110 25-147 23-137 (167)
15 3o1l_A Formyltetrahydrofolate 97.8 0.00075 2.6E-08 61.7 15.7 50 25-74 20-71 (302)
16 2re1_A Aspartokinase, alpha an 97.8 0.0006 2E-08 56.8 13.7 123 113-298 22-149 (167)
17 3n0v_A Formyltetrahydrofolate 97.8 0.0014 4.9E-08 59.4 17.1 49 26-74 7-57 (286)
18 3l76_A Aspartokinase; alloster 97.7 0.006 2.1E-07 61.0 21.9 203 25-299 353-574 (600)
19 2dt9_A Aspartokinase; protein- 97.7 0.00074 2.5E-08 56.2 12.7 109 24-146 13-128 (167)
20 3nrb_A Formyltetrahydrofolate 97.6 0.0022 7.5E-08 58.2 16.6 116 26-151 6-123 (287)
21 2dtj_A Aspartokinase; protein- 97.6 0.00088 3E-08 56.4 12.4 138 25-189 13-157 (178)
22 3lou_A Formyltetrahydrofolate 97.6 0.0025 8.5E-08 58.0 16.1 48 26-73 9-58 (292)
23 2dtj_A Aspartokinase; protein- 97.6 0.0026 9E-08 53.5 15.2 122 113-297 12-140 (178)
24 3o1l_A Formyltetrahydrofolate 97.4 0.00065 2.2E-08 62.1 10.1 66 115-186 21-88 (302)
25 3l76_A Aspartokinase; alloster 97.3 0.06 2.1E-06 53.7 24.0 202 28-286 271-480 (600)
26 3obi_A Formyltetrahydrofolate 97.3 0.00076 2.6E-08 61.3 9.2 66 115-186 5-72 (288)
27 3n0v_A Formyltetrahydrofolate 97.3 0.00075 2.6E-08 61.3 9.0 71 115-193 7-79 (286)
28 3nrb_A Formyltetrahydrofolate 97.3 0.00075 2.6E-08 61.3 8.4 68 114-190 5-74 (287)
29 3lou_A Formyltetrahydrofolate 97.2 0.00093 3.2E-08 60.8 8.7 68 115-186 9-78 (292)
30 2f1f_A Acetolactate synthase i 97.2 0.0016 5.6E-08 54.1 8.8 63 116-186 3-67 (164)
31 2dt9_A Aspartokinase; protein- 97.2 0.0018 6E-08 53.9 9.1 123 113-299 13-142 (167)
32 3s1t_A Aspartokinase; ACT doma 97.1 0.0037 1.3E-07 52.8 11.1 137 26-189 15-158 (181)
33 2f1f_A Acetolactate synthase i 97.1 0.0018 6E-08 53.9 8.7 64 251-321 3-68 (164)
34 2pc6_A Probable acetolactate s 97.0 0.003 1E-07 52.5 8.9 63 116-186 4-68 (165)
35 2pc6_A Probable acetolactate s 96.9 0.0025 8.5E-08 53.0 7.7 64 251-321 4-69 (165)
36 2jhe_A Transcription regulator 96.7 0.0047 1.6E-07 51.2 8.2 58 253-319 2-59 (190)
37 3ab4_A Aspartokinase; aspartat 96.5 0.061 2.1E-06 51.3 15.5 107 26-145 263-376 (421)
38 4go7_X Aspartokinase; transfer 96.3 0.0082 2.8E-07 51.5 7.1 112 24-148 32-150 (200)
39 2fgc_A Acetolactate synthase, 96.3 0.015 5E-07 49.4 8.4 63 116-186 29-93 (193)
40 2fgc_A Acetolactate synthase, 96.2 0.015 5E-07 49.4 8.0 63 251-320 29-93 (193)
41 3s1t_A Aspartokinase; ACT doma 96.2 0.094 3.2E-06 44.0 12.9 123 115-300 15-144 (181)
42 1y7p_A Hypothetical protein AF 96.2 0.011 3.7E-07 51.0 7.0 48 251-298 4-56 (223)
43 1y7p_A Hypothetical protein AF 96.1 0.012 4.1E-07 50.7 6.9 47 27-73 4-55 (223)
44 2jhe_A Transcription regulator 96.0 0.034 1.2E-06 45.9 9.0 59 118-186 2-60 (190)
45 3ab4_A Aspartokinase; aspartat 95.8 0.13 4.6E-06 48.9 13.8 109 115-282 263-378 (421)
46 3c1m_A Probable aspartokinase; 95.4 0.15 5.1E-06 49.4 12.6 106 26-145 317-436 (473)
47 4go7_X Aspartokinase; transfer 95.4 0.12 4.2E-06 44.1 10.6 124 113-299 32-162 (200)
48 3c1m_A Probable aspartokinase; 94.6 0.49 1.7E-05 45.7 13.5 131 114-299 316-453 (473)
49 3tvi_A Aspartokinase; structur 93.0 0.71 2.4E-05 44.3 11.2 121 26-164 297-423 (446)
50 1sc6_A PGDH, D-3-phosphoglycer 92.5 0.56 1.9E-05 44.4 9.7 50 250-299 330-379 (404)
51 1sc6_A PGDH, D-3-phosphoglycer 91.2 0.68 2.3E-05 43.8 8.6 48 26-73 330-377 (404)
52 3luy_A Probable chorismate mut 90.7 1.6 5.6E-05 39.9 10.4 52 252-304 207-261 (329)
53 2qmx_A Prephenate dehydratase; 90.7 0.61 2.1E-05 41.9 7.4 54 250-304 199-253 (283)
54 3k5p_A D-3-phosphoglycerate de 90.4 0.57 2E-05 44.5 7.3 56 12-69 330-385 (416)
55 1ygy_A PGDH, D-3-phosphoglycer 90.3 0.91 3.1E-05 44.4 8.9 50 113-162 451-502 (529)
56 2cdq_A Aspartokinase; aspartat 89.7 3.6 0.00012 40.0 12.6 138 26-189 340-483 (510)
57 3tvi_A Aspartokinase; structur 89.6 1.3 4.6E-05 42.3 9.3 122 115-300 297-424 (446)
58 3mwb_A Prephenate dehydratase; 89.5 0.77 2.6E-05 41.8 7.1 55 249-304 199-255 (313)
59 3k5p_A D-3-phosphoglycerate de 89.0 3.1 0.00011 39.4 11.2 49 114-162 341-389 (416)
60 3mtj_A Homoserine dehydrogenas 88.9 0.79 2.7E-05 43.9 7.0 51 250-300 358-410 (444)
61 1ygy_A PGDH, D-3-phosphoglycer 88.6 2.3 7.9E-05 41.5 10.4 62 26-92 453-516 (529)
62 3luy_A Probable chorismate mut 88.6 4.1 0.00014 37.3 11.3 51 117-169 207-260 (329)
63 2qmx_A Prephenate dehydratase; 88.4 1.3 4.5E-05 39.7 7.7 64 116-186 200-264 (283)
64 2qmw_A PDT, prephenate dehydra 88.0 1.1 3.9E-05 39.8 7.0 49 250-298 185-237 (267)
65 3mah_A Aspartokinase; aspartat 87.7 0.89 3E-05 36.8 5.7 113 26-164 17-135 (157)
66 2qmw_A PDT, prephenate dehydra 86.2 3.4 0.00011 36.7 9.0 50 115-164 185-238 (267)
67 3mwb_A Prephenate dehydratase; 85.3 2.2 7.4E-05 38.9 7.4 50 115-164 200-251 (313)
68 2cdq_A Aspartokinase; aspartat 79.1 27 0.00091 33.8 13.1 123 115-299 340-468 (510)
69 3mtj_A Homoserine dehydrogenas 73.2 6.3 0.00022 37.6 6.7 51 114-164 357-409 (444)
70 1phz_A Protein (phenylalanine 68.4 4.1 0.00014 38.6 4.0 53 248-301 31-84 (429)
71 1phz_A Protein (phenylalanine 62.0 7 0.00024 37.0 4.3 51 114-164 32-83 (429)
72 3g12_A Putative lactoylglutath 49.0 45 0.0015 24.8 6.5 49 250-305 66-115 (128)
73 3g12_A Putative lactoylglutath 47.1 68 0.0023 23.8 7.3 49 26-81 66-115 (128)
74 1tdj_A Biosynthetic threonine 40.4 94 0.0032 30.0 8.5 130 27-164 338-483 (514)
75 3mah_A Aspartokinase; aspartat 32.5 29 0.00099 27.5 3.0 34 114-147 16-52 (157)
76 3v69_A Protein filia; RNA-bind 32.2 38 0.0013 26.7 3.4 37 2-38 74-110 (140)
77 3r6a_A Uncharacterized protein 31.3 1.1E+02 0.0036 23.4 6.2 46 253-305 68-113 (144)
78 1zhv_A Hypothetical protein AT 29.0 50 0.0017 25.8 3.7 37 250-288 61-100 (134)
79 2j0w_A Lysine-sensitive aspart 28.2 30 0.001 32.8 2.8 104 26-145 307-416 (449)
80 3kol_A Oxidoreductase, glyoxal 25.2 79 0.0027 23.6 4.4 38 265-305 109-146 (156)
81 1zhv_A Hypothetical protein AT 24.5 51 0.0018 25.7 3.0 45 115-164 61-108 (134)
82 1zvp_A Hypothetical protein VC 23.7 97 0.0033 24.1 4.5 36 250-287 70-108 (133)
83 1zvp_A Hypothetical protein VC 23.0 99 0.0034 24.0 4.4 45 115-164 70-117 (133)
84 3rri_A Glyoxalase/bleomycin re 20.8 1.3E+02 0.0043 22.0 4.6 42 264-305 80-123 (135)
85 3hdp_A Glyoxalase-I; glutathio 20.2 2.5E+02 0.0084 20.1 6.3 49 253-305 80-128 (133)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=2.5e-18 Score=149.37 Aligned_cols=160 Identities=13% Similarity=0.126 Sum_probs=117.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCCCCc
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~ 194 (329)
..++|+|+|+|||||++.|+++|+++|+||++|++++..+++...|.|..+ +. ..+.+++.|++.|..++.+ ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~--~~--~~~~~~~~l~~~L~~~~~~-~~- 77 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN--AK--DGKLIQSALESALPGFQIS-TR- 77 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SS--SSHHHHHHHHHHSTTCEEE-EE-
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec--Cc--cchhHHHHHHHHHHHHHHh-cC-
Confidence 467999999999999999999999999999999999999998888888763 21 1233456565555432211 11
Q ss_pred ccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeCCCcchHHHHHHHHhc
Q 020194 195 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~DrpGLL~~I~~~l~~ 274 (329)
+ . +.+. . .+. ..+...++|+|.|+|||||++.|+++|++
T Consensus 78 ------~--------~----------~~~~----------~---~~~----~~~~~~~iltv~g~DrpGiva~Vt~~La~ 116 (195)
T 2nyi_A 78 ------R--------A----------SSVA----------E---RHV----SPDTREYELYVEGPDSEGIVEAVTAVLAK 116 (195)
T ss_dssp ------E--------C----------CCC-----------------C----CTTEEEEEEEEEEECCTTHHHHHHHHHHH
T ss_pred ------C--------e----------EEEE----------e---CCc----CCCCcEEEEEEEeCCCcCHHHHHHHHHHH
Confidence 0 0 0000 0 010 23446799999999999999999999999
Q ss_pred CCeEEEEEEEEecC--CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 020194 275 MQYVVFHGMVNTGR--TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324 (329)
Q Consensus 275 ~~i~I~~a~I~T~g--~~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 324 (329)
+|+||..++..|.+ ++..+.||++-.-+-+ +... +.|++.|.....+
T Consensus 117 ~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 117 KGANIVELETETLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVEEE 165 (195)
T ss_dssp TTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHHHH
T ss_pred cCCCEEEceeeecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHHHH
Confidence 99999999999998 7889999998665433 2234 7788887765543
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=7.6e-18 Score=146.33 Aligned_cols=154 Identities=18% Similarity=0.195 Sum_probs=109.8
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccC---CC
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS---FA 101 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~---~~ 101 (329)
...+|+|+|+||||||++++++|+.+|+||++|++++ .+++++ .|.|..+.. ......+.|++.|..... ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK---DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS---SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc---cchhHHHHHHHHHHHHHHhcCCe
Confidence 4579999999999999999999999999999999997 445555 777754421 112345667777754321 11
Q ss_pred CCcceeeeecCCCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeC--CeEEEEEEEEeCCCCCCCCCHHHHHH
Q 020194 102 PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLST 179 (329)
Q Consensus 102 ~~~~~~v~~~~~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~--~~~~d~f~V~~~~~g~~~~~~~~~~~ 179 (329)
...+..-. ......++|+|.|+|||||++.|+++|+++|+||.+++.+|.+ ++..+.|++.. ..+.+ +... +.
T Consensus 80 ~~~~~~~~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~-~~~~~--~~~~-~~ 154 (195)
T 2nyi_A 80 SSVAERHV-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS-RVAFP--FPLY-QE 154 (195)
T ss_dssp CCC----C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE-EEEEE--GGGH-HH
T ss_pred EEEEeCCc-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE-EEEcC--CCcc-HH
Confidence 00000001 2334678999999999999999999999999999999999986 55567787766 22222 2234 77
Q ss_pred HHHHHHHHH
Q 020194 180 IKELLFNVL 188 (329)
Q Consensus 180 l~~~L~~~L 188 (329)
|++.|....
T Consensus 155 l~~~l~~~a 163 (195)
T 2nyi_A 155 VVTALSRVE 163 (195)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887643
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.75 E-value=3e-17 Score=142.10 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=117.5
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCCCCc
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~ 194 (329)
..++|+|+|+||||++++|+++|+++|+||.++++++..+.+...+.|..+ ...+++|++.|...+ ++.++
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~-~~~~~ 75 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLG-QQHDL 75 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHH-HHHTC
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHH-HhcCC
Confidence 357899999999999999999999999999999999998988888888752 146788888888755 32221
Q ss_pred ccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeCCCcchHHHHHHHHhc
Q 020194 195 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~DrpGLL~~I~~~l~~ 274 (329)
..+++.. . .++ ...+...++|+|.++||||++++|+++|++
T Consensus 76 ---------------~~~~~~~----~----------------~~~----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~ 116 (192)
T 1u8s_A 76 ---------------ITMMKRT----S----------------PHD----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQ 116 (192)
T ss_dssp ---------------EEEEEEE----C----------------CCC----CCCCSEEEEEEEEESCCTTHHHHHHHHHHH
T ss_pred ---------------EEEEEeC----C----------------CCC----CccCCceEEEEEEeCCCccHHHHHHHHHHH
Confidence 0111100 0 011 014457799999999999999999999999
Q ss_pred CCeEEEEEEEEecCC----eEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 020194 275 MQYVVFHGMVNTGRT----EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324 (329)
Q Consensus 275 ~~i~I~~a~I~T~g~----~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 324 (329)
+|+||..++..|.++ +..+.||++-.-+-+ +....+.|++.|.+...+
T Consensus 117 ~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~~~ 168 (192)
T 1u8s_A 117 RQIGMASLSAQTISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALCTA 168 (192)
T ss_dssp TTCCEEEEEEEEEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHHHH
T ss_pred cCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHHHH
Confidence 999999999999985 689999997654322 112356777777765543
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.70 E-value=3.9e-16 Score=135.09 Aligned_cols=155 Identities=12% Similarity=0.094 Sum_probs=104.7
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCCCcce
Q 020194 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS 106 (329)
Q Consensus 27 ~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~~~~~ 106 (329)
..+|+|+|+||||+|++++++|+.+|+||+++++++..|.+.-.|.|..+. . ...++.+.|+..+.. ........+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-~--~~~~l~~~L~~~~~~-~~~~~~~~~ 81 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-S--NITRVETTLPLLGQQ-HDLITMMKR 81 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-H--HHHHHHHHHHHHHHH-HTCEEEEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-C--CHHHHHHHHHHHHHh-cCCEEEEEe
Confidence 578999999999999999999999999999999998666655578775432 1 112344444443321 111100000
Q ss_pred e--eeecCCCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCC----eEEEEEEEEeCCCCCCCCCHHHHHHH
Q 020194 107 S--VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND----RAAAVVHVTDHSTGYAIKDPKRLSTI 180 (329)
Q Consensus 107 ~--v~~~~~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~----~~~d~f~V~~~~~g~~~~~~~~~~~l 180 (329)
. -........++|+|.|+||||++++|+++|+++|+||.+++..|.+. +..+.|++... .+.+ +....+.|
T Consensus 82 ~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~-~~~~--~~~~~~~l 158 (192)
T 1u8s_A 82 TSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS-ARVD--SGCNLMQL 158 (192)
T ss_dssp ECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE-EEEC--TTSCHHHH
T ss_pred CCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE-EeCC--CCCCHHHH
Confidence 0 00123346789999999999999999999999999999999999763 45677877662 2221 12245778
Q ss_pred HHHHHHHH
Q 020194 181 KELLFNVL 188 (329)
Q Consensus 181 ~~~L~~~L 188 (329)
++.|....
T Consensus 159 ~~~l~~~~ 166 (192)
T 1u8s_A 159 QEEFDALC 166 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887643
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.96 E-value=4.1e-08 Score=94.16 Aligned_cols=140 Identities=12% Similarity=0.047 Sum_probs=98.3
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCCCCc
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~ 194 (329)
..++|+|.|+||||+.+.|+++|+++|+||.++..++.++.+.....+.-+ +. ....+.|++.|.. +.++.++
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~--~~----~~~~~~l~~~l~~-~~~~~~~ 83 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP--AD----VADGPALRHDVEA-AIRKVGL 83 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC--HH----HHTSHHHHHHHHH-HHHHTTC
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec--CC----cCCHHHHHHHHHH-HHHHcCe
Confidence 467899999999999999999999999999999999988887766656542 11 0023677777765 4443332
Q ss_pred ccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeCC-CcchHHHHHHHHh
Q 020194 195 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD-RPKLLFDIVCTLT 273 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~D-rpGLL~~I~~~l~ 273 (329)
.-+++. . . .++++ ....+.++++.+.| +||++.+|+.+++
T Consensus 84 ---------------~~~~~~-----~--~-------------~~~~~----~~~~~~~~~llg~~~~~~~~~~i~~~l~ 124 (415)
T 3p96_A 84 ---------------DVSIER-----S--D-------------DVPII----REPSTHTIFVLGRPITAAAFGAVAREVA 124 (415)
T ss_dssp ---------------EEEEEE-----C--S-------------SSCSS----CCCCSEEEEEEESSCCHHHHHHHHHHHH
T ss_pred ---------------EEEEEE-----C--C-------------ccccc----CCCCcEEEEEEeCCCCHHHHHHHHHHHH
Confidence 011110 0 0 00100 23467889999999 9999999999999
Q ss_pred cCCeEEEEEEEEecCCeEEEEEEEEeC
Q 020194 274 DMQYVVFHGMVNTGRTEAYQEFYIRHV 300 (329)
Q Consensus 274 ~~~i~I~~a~I~T~g~~~~D~F~v~~~ 300 (329)
++|+||...+.-+......=.|++.-.
T Consensus 125 ~~~~Ni~~l~~~~~~~~~~~~~~v~~~ 151 (415)
T 3p96_A 125 ALGVNIDLIRGVSDYPVIGLELRVSVP 151 (415)
T ss_dssp HTTCEEEEEEEEESSSSEEEEEEEECC
T ss_pred HcCCCccceeeccCCCceEEEEEeeCC
Confidence 999999998877743434444777433
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.94 E-value=3.8e-08 Score=94.36 Aligned_cols=133 Identities=12% Similarity=0.050 Sum_probs=91.9
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCCCcc
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~~~~ 105 (329)
...+|++.|+||||+.+.++++|+++|+||++.+.+..+|.+.-...+.-+.+. .+..++.+.++.. .......
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~~~~~l~~~l~~~-~~~~~~~---- 84 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-ADGPALRHDVEAA-IRKVGLD---- 84 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-HTSHHHHHHHHHH-HHHTTCE----
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-CCHHHHHHHHHHH-HHHcCeE----
Confidence 457899999999999999999999999999999999877766544444322211 1113344444432 2211111
Q ss_pred eeeee------cCCCCeEEEEEEeCC-CccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEe
Q 020194 106 SSVGV------MPTEEHTSIEFTGTD-RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (329)
Q Consensus 106 ~~v~~------~~~~~~~~i~v~~~D-r~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~ 164 (329)
..+.. .....+..+++.+++ ++|++.+|+.+++.+|+||.+.+..+....+.-.|++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~ 150 (415)
T 3p96_A 85 VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSV 150 (415)
T ss_dssp EEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEEC
T ss_pred EEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeC
Confidence 01110 133467889999999 999999999999999999998888774444445577754
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.58 E-value=3e-06 Score=69.10 Aligned_cols=111 Identities=18% Similarity=0.187 Sum_probs=74.2
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCCCcce
Q 020194 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS 106 (329)
Q Consensus 27 ~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~~~~~ 106 (329)
..+++|..+|+||.++++++.|++.|+||..-.+....+..+-.|.+. . .+...+.|++. +..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~----d---~~~a~~~L~~~--G~~-------- 68 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS----D---PDKAYKALKDN--HFA-------- 68 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES----C---HHHHHHHHHHT--TCC--------
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC----C---HHHHHHHHHHc--CCe--------
Confidence 358899999999999999999999999999877653222122235421 1 12333333321 110
Q ss_pred eeeecCCCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEE
Q 020194 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160 (329)
Q Consensus 107 ~v~~~~~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f 160 (329)
+ ....++.+..+|+||.+++++++|+++|+||.....+..++...-+|
T Consensus 69 -v-----~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 69 -V-----NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp -E-----EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred -E-----eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEE
Confidence 0 01246777899999999999999999999998776653334444343
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.40 E-value=1.6e-05 Score=64.77 Aligned_cols=113 Identities=16% Similarity=0.069 Sum_probs=74.3
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcc
Q 020194 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195 (329)
Q Consensus 116 ~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~~ 195 (329)
...|+|..+|+||.++++++.|+++|+||..-.+....+.-.-.|.+. ++ ++.++.|.+. + ..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~---------d~---~~a~~~L~~~--G-~~-- 68 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS---------DP---DKAYKALKDN--H-FA-- 68 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES---------CH---HHHHHHHHHT--T-CC--
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC---------CH---HHHHHHHHHc--C-Ce--
Confidence 357888999999999999999999999999877764333111223221 22 3333334331 1 00
Q ss_pred cccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeCCCcchHHHHHHHHhcC
Q 020194 196 KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDM 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~DrpGLL~~I~~~l~~~ 275 (329)
. . .+.++-+.-+|+||.+++++++|++.
T Consensus 69 -----v--------------------------------------~---------~~svv~v~~~d~pGvla~i~~~L~~~ 96 (144)
T 2f06_A 69 -----V--------------------------------------N---------ITDVVGISCPNVPGALAKVLGFLSAE 96 (144)
T ss_dssp -----E--------------------------------------E---------EEEEEEEEEESSTTHHHHHHHHHHHT
T ss_pred -----E--------------------------------------e---------eeeEEEEEeCCCCcHHHHHHHHHHHC
Confidence 0 0 11456667789999999999999999
Q ss_pred CeEEEEEEEEecCCeEEEEEEE
Q 020194 276 QYVVFHGMVNTGRTEAYQEFYI 297 (329)
Q Consensus 276 ~i~I~~a~I~T~g~~~~D~F~v 297 (329)
||||.+......+.++.-.|-+
T Consensus 97 ~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 97 GVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp TCCEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEccCCcEEEEEEe
Confidence 9999776654234455444533
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.26 E-value=6.3e-06 Score=61.52 Aligned_cols=65 Identities=14% Similarity=0.230 Sum_probs=52.1
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
..+.|.|.++||||++++|+++|+++|+||.+....+..+.+.-.+.+.-+ + . ..++.|.+.|.+
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~-~----~~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--E-K----QDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--S-C----CCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--C-C----CCHHHHHHHHHH
Confidence 457899999999999999999999999999999999887776666666542 2 1 235777777776
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.25 E-value=9.5e-06 Score=60.54 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=49.1
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHH
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~ 92 (329)
....|+|.++||||++++++++|+++|+||.+.+..+.+|.+.-.+.+.-++.. .-.++.+.|++
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~--~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQ--DFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCC--CHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCC--CHHHHHHHHHH
Confidence 356899999999999999999999999999999998866877666766433322 11345555544
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.14 E-value=1.3e-05 Score=59.23 Aligned_cols=64 Identities=9% Similarity=0.031 Sum_probs=49.7
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHH
Q 020194 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319 (329)
Q Consensus 250 ~~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~ 319 (329)
..+.|.|.+.||||+|++|+++|++.|+||.++.+.+.++.+...|.+.-. +.+..+++.+.|.
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~------~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK------NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES------SHHHHHHHHHHHT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC------CHHHHHHHHHHHh
Confidence 457899999999999999999999999999999998876666666655433 2344566666554
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.94 E-value=5.7e-05 Score=55.60 Aligned_cols=49 Identities=12% Similarity=0.262 Sum_probs=41.1
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEe
Q 020194 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (329)
Q Consensus 116 ~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~ 164 (329)
.+.|.|.+.||||++++|+++|++.|+||.+..+.+.++.+...|.+..
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~ 53 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFV 53 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEE
Confidence 5678899999999999999999999999999999886664445555543
No 13
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.82 E-value=0.0011 Score=60.27 Aligned_cols=117 Identities=10% Similarity=0.047 Sum_probs=70.5
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCCCc
Q 020194 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL 104 (329)
Q Consensus 27 ~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~~~ 104 (329)
..++++.|+||||+.+++++.|+++|+||.+.+.++ ..|.++-...+.-+++ ..+..++.+.++.. ..+.. +
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~~~~~L~~~f~~l-a~~~~----m 79 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VIPLASLRTGFGVI-AAKFT----M 79 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CCCHHHHHHHHHHH-HHHTT----C
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CCCHHHHHHHHHHH-HHHcC----C
Confidence 468999999999999999999999999999999985 4576654444433332 12223444444432 22211 1
Q ss_pred ceeeeecCCCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEe
Q 020194 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (329)
Q Consensus 105 ~~~v~~~~~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t 151 (329)
.+..........|-|....+---|..|......-.+++.=+-+.+
T Consensus 80 --~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 80 --GWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp --EEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred --EEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 122211122334444444444467788777777667654444444
No 14
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.79 E-value=0.00022 Score=59.57 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=75.1
Q ss_pred CCeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEE-ecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCC
Q 020194 25 ADATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (329)
Q Consensus 25 ~~~~~v~v~-~~Dr~GL~a~i~~~L~~~glnI~~A~i~-t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~ 102 (329)
.+...|+|. .+|+||.++++..+|+++|+||.--... +.+|.....|.|...+. ++..+.|++ +..+...
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~l~~-- 94 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY-----KQTLEILSE-RQDSIGA-- 94 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH-----HHHHHHHHH-SSTTTTC--
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH-----HHHHHHHHH-HHHHcCC--
Confidence 367888888 5999999999999999999999865543 23465555687643211 223333333 2222210
Q ss_pred CcceeeeecCCCCeEEEEEEeCC---CccHHHHHHHHHHhCCCcEEEE
Q 020194 103 SLRSSVGVMPTEEHTSIEFTGTD---RPGLFSEVCAVLADLHCNVVNA 147 (329)
Q Consensus 103 ~~~~~v~~~~~~~~~~i~v~~~D---r~Gll~~i~~~l~~~g~~I~~A 147 (329)
..+ ....+...|.|.|.+ +||+++++..+|+++|+||...
T Consensus 95 ---~~i--~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 95 ---ASI--DGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp ---SEE--EEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred ---ceE--EecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 111 123467889999987 9999999999999999999873
No 15
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.77 E-value=0.00075 Score=61.69 Aligned_cols=50 Identities=24% Similarity=0.343 Sum_probs=41.8
Q ss_pred CCeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEec--CCEEEEEEEEE
Q 020194 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74 (329)
Q Consensus 25 ~~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~--~g~~~d~F~V~ 74 (329)
....++++.|+||||+.+++++.|+++|+||.+++.+++ .|+++-...+.
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~ 71 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIR 71 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEe
Confidence 455789999999999999999999999999999999873 67765444443
No 16
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.76 E-value=0.0006 Score=56.84 Aligned_cols=123 Identities=14% Similarity=0.074 Sum_probs=79.7
Q ss_pred CCCeEEEEEE-eCCCccHHHHHHHHHHhCCCcEEEEEEEee-CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 020194 113 TEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (329)
Q Consensus 113 ~~~~~~i~v~-~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~-~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 190 (329)
..+...|+|. .+|+||.+++|.++|+++|+||..-..... +|...-.|.|... + .++..+.|.+ +..
T Consensus 22 ~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~-------~---~~~a~~~l~~-~~~ 90 (167)
T 2re1_A 22 DKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG-------D---YKQTLEILSE-RQD 90 (167)
T ss_dssp ECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG-------G---HHHHHHHHHH-SST
T ss_pred cCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech-------H---HHHHHHHHHH-HHH
Confidence 3466788888 499999999999999999999986554322 2333455666431 1 1333344444 222
Q ss_pred CCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeCC---CcchHHH
Q 020194 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD---RPKLLFD 267 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~D---rpGLL~~ 267 (329)
+.. . ..|.+. ...+.+.|.+.+ +||++++
T Consensus 91 ~l~-------~--------------------------------------~~i~~~---~~~a~vsvvG~~m~~~~Gv~a~ 122 (167)
T 2re1_A 91 SIG-------A--------------------------------------ASIDGD---DTVCKVSAVGLGMRSHVGVAAK 122 (167)
T ss_dssp TTT-------C--------------------------------------SEEEEE---SSEEEEEEECSSCTTCCCHHHH
T ss_pred HcC-------C--------------------------------------ceEEec---CCEEEEEEECCCcCCCcCHHHH
Confidence 111 0 122332 367899999976 9999999
Q ss_pred HHHHHhcCCeEEEEEEEEecCCeEEEEEEEE
Q 020194 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298 (329)
Q Consensus 268 I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~ 298 (329)
+.++|++.||+|... +| ....-.|+|.
T Consensus 123 i~~aL~~~~InI~~i--st--se~~is~vv~ 149 (167)
T 2re1_A 123 IFRTLAEEGINIQMI--ST--SEIKVSVLID 149 (167)
T ss_dssp HHHHHHHTTCCCCEE--EE--CSSEEEEEEE
T ss_pred HHHHHHHCCCcEEEE--Ec--ccCEEEEEEe
Confidence 999999999999994 45 2233445553
No 17
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.75 E-value=0.0014 Score=59.39 Aligned_cols=49 Identities=14% Similarity=0.131 Sum_probs=40.8
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEE
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVI 74 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V~ 74 (329)
...++++.|+||||+.+++++.|+++|+||.+.+.++ ..|+++-...+.
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 57 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFR 57 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEe
Confidence 3478999999999999999999999999999999986 456665444443
No 18
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.67 E-value=0.006 Score=61.02 Aligned_cols=203 Identities=15% Similarity=0.118 Sum_probs=127.3
Q ss_pred CCeEEEEEEec---CCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCC
Q 020194 25 ADATVIKVDSV---NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101 (329)
Q Consensus 25 ~~~~~v~v~~~---Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~ 101 (329)
.+...|++.+. ++||..+++..+|++.|+||.-.. +. ... .+|.|...+. .+..+.|.+.+.......
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~-Is~vI~~~d~-----~~Av~aLh~~f~~~~t~~ 423 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVK-VSCVIDQRDA-----DRAIAALSNAFGVTLSPP 423 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSE-EEEEEEGGGH-----HHHHHHHHHHTTCCBCCC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCE-EEEEEcHHHH-----HHHHHHHHHhhcccCCCc
Confidence 46789999976 789999999999999999997554 32 222 2466644322 346667777765432100
Q ss_pred CC-----cceeee-ecCCCCeEEEEEE-eCCCccHHHHHHHHHHhCCCcEEEEEEEeeC----C--eEEEEEEEEeCCCC
Q 020194 102 PS-----LRSSVG-VMPTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTHN----D--RAAAVVHVTDHSTG 168 (329)
Q Consensus 102 ~~-----~~~~v~-~~~~~~~~~i~v~-~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~----~--~~~d~f~V~~~~~g 168 (329)
.. ....|. ...+.+...|+|. .+|+||+.++|.+.|+++|+||.--...... | .....|.|..
T Consensus 424 ~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---- 499 (600)
T 3l76_A 424 KNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---- 499 (600)
T ss_dssp CCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----
T ss_pred cccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----
Confidence 00 011111 2334456677765 5899999999999999999999644333321 3 2234565543
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCC
Q 020194 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE 248 (329)
Q Consensus 169 ~~~~~~~~~~~l~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~ 248 (329)
+..++..+.|.+ +..+.+ +.++.++
T Consensus 500 ------~d~~~a~~~l~~-~~~~~~---------------------------------------------~~~v~~~--- 524 (600)
T 3l76_A 500 ------GDSSQAEAILQP-LIKDWL---------------------------------------------DAAIVVN--- 524 (600)
T ss_dssp ------HHHHHHHHHHHH-HTTTST---------------------------------------------TCEEEEE---
T ss_pred ------HHHHHHHHHHHH-HHHhcC---------------------------------------------CceEEEe---
Confidence 234444444544 322211 1223343
Q ss_pred CCeEEEEEEe---CCCcchHHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEe
Q 020194 249 KDYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299 (329)
Q Consensus 249 ~~~t~l~v~a---~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~ 299 (329)
++...+.|.+ ..+||+.+++.++|++.||||.... | ....=.+.|..
T Consensus 525 ~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--t--SEi~Is~vV~~ 574 (600)
T 3l76_A 525 KAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--T--SEIKISCVVPQ 574 (600)
T ss_dssp CCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--E--CSSEEEEEEEG
T ss_pred CCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--c--CCceEEEEEeH
Confidence 3678888886 5999999999999999999998766 3 23334455543
No 19
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.65 E-value=0.00074 Score=56.22 Aligned_cols=109 Identities=13% Similarity=0.134 Sum_probs=74.4
Q ss_pred CCCeEEEEEEe-cCCccHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccC
Q 020194 24 CADATVIKVDS-VNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99 (329)
Q Consensus 24 ~~~~~~v~v~~-~Dr~GL~a~i~~~L~~~glnI~~A~i~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~ 99 (329)
..+...|++.+ +|+||.++++.++|++.|+||.--..... .|..-.+|.|...+. ++..+.|++ +..+..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~-~~~~~~ 86 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEP-VLAEIG 86 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHH-HHHHHC
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHH-HHHHhC
Confidence 34677888876 89999999999999999999985443322 345555688754322 223333333 222211
Q ss_pred CCCCcceeeeecCCCCeEEEEEEeCC---CccHHHHHHHHHHhCCCcEEE
Q 020194 100 FAPSLRSSVGVMPTEEHTSIEFTGTD---RPGLFSEVCAVLADLHCNVVN 146 (329)
Q Consensus 100 ~~~~~~~~v~~~~~~~~~~i~v~~~D---r~Gll~~i~~~l~~~g~~I~~ 146 (329)
. .+. ...+...+.|.|.+ +||+++++.++|++.|+||..
T Consensus 87 ~------~v~--~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 87 G------EAI--LRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEM 128 (167)
T ss_dssp C------EEE--EECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCE
T ss_pred C------cEE--EeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEE
Confidence 0 122 23467789999887 999999999999999999943
No 20
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.65 E-value=0.0022 Score=58.20 Aligned_cols=116 Identities=10% Similarity=-0.017 Sum_probs=67.5
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCCC
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS 103 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~~ 103 (329)
....+++.|+||||+.+++++.|+++|+||.+.+.++ ..|+++-...+.. ++... .++.+.++.. ..+..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~~~~--~~L~~~f~~l-a~~~~---- 77 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PVAGV--NDFNSAFGKV-VEKYN---- 77 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC-----CHHHHHHHHH-HGGGT----
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CCCCH--HHHHHHHHHH-HHHcC----
Confidence 4578999999999999999999999999999999985 4566653333322 22111 2344444332 22211
Q ss_pred cceeeeecCCCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEe
Q 020194 104 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (329)
Q Consensus 104 ~~~~v~~~~~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t 151 (329)
+...+..........|.+.+. ---|..+......-.+++.=+-+.+
T Consensus 78 m~~~l~~~~~~~ri~vl~Sg~--g~nl~~ll~~~~~g~l~~~i~~Vis 123 (287)
T 3nrb_A 78 AEWWFRPRTDRKKVVIMVSKF--DHCLGDLLYRHRLGELDMEVVGIIS 123 (287)
T ss_dssp CEEEEEETTCCCEEEEEECSC--CHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred CeeEeeccCCCcEEEEEEeCC--CcCHHHHHHHHHCCCCCeEEEEEEe
Confidence 111222222223344444444 3467777777766656544344444
No 21
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.59 E-value=0.00088 Score=56.43 Aligned_cols=138 Identities=17% Similarity=0.280 Sum_probs=84.7
Q ss_pred CCeEEEEE-EecCCccHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCC
Q 020194 25 ADATVIKV-DSVNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF 100 (329)
Q Consensus 25 ~~~~~v~v-~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~ 100 (329)
.+.+.|+| ..+|+||.++++...|+++|+||.--...+. +|..-..|.+...+. ++..+.|++ +..+..
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d~-----~~a~~~l~~-~~~~~~- 85 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDG-----RRAMEILKK-LQVQGN- 85 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHH-----HHHHHHHHT-TTTTTT-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccccH-----HHHHHHHHH-HHHhcC-
Confidence 46778888 4699999999999999999999985544432 334433477643111 122222222 222211
Q ss_pred CCCcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHH
Q 020194 101 APSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177 (329)
Q Consensus 101 ~~~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~ 177 (329)
...+. ...+...|.|.|. +.||+++++..+|++.|+||..- .+.. ....|.|.. +..
T Consensus 86 ----~~~v~--~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i--stSe--~~Is~vV~~----------~d~ 145 (178)
T 2dtj_A 86 ----WTNVL--YDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI--STSE--IRISVLIRE----------DDL 145 (178)
T ss_dssp ----CSEEE--EESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE--EEET--TEEEEEEEG----------GGH
T ss_pred ----CCeEE--EeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE--EcCC--CeEEEEEeH----------HHH
Confidence 01122 2346777888876 88999999999999999999873 3432 233455532 223
Q ss_pred HHHHHHHHHHHc
Q 020194 178 STIKELLFNVLR 189 (329)
Q Consensus 178 ~~l~~~L~~~L~ 189 (329)
++..+.|.+.+.
T Consensus 146 ~~Av~~Lh~~F~ 157 (178)
T 2dtj_A 146 DAAARALHEQFQ 157 (178)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 444455666664
No 22
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.59 E-value=0.0025 Score=58.00 Aligned_cols=48 Identities=10% Similarity=0.122 Sum_probs=40.2
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEE
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNV 73 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V 73 (329)
...++++.|+||||+.+++++.|+++|+||.+.+.++ ..|+++-...+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~ 58 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVF 58 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEE
Confidence 3578999999999999999999999999999999996 45666533333
No 23
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.58 E-value=0.0026 Score=53.47 Aligned_cols=122 Identities=14% Similarity=0.116 Sum_probs=78.9
Q ss_pred CCCeEEEEEE-eCCCccHHHHHHHHHHhCCCcEEEEEEEee---CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHH
Q 020194 113 TEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188 (329)
Q Consensus 113 ~~~~~~i~v~-~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~---~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L 188 (329)
..+.+.|+|. .+|+||.+++|.+.|+++|+||......+. ++.....|.+.. +..++..+.|.+ +
T Consensus 12 ~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~----------~d~~~a~~~l~~-~ 80 (178)
T 2dtj_A 12 DKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR----------SDGRRAMEILKK-L 80 (178)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH----------HHHHHHHHHHHT-T
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc----------ccHHHHHHHHHH-H
Confidence 3456777774 689999999999999999999886555443 223333466543 122333333332 2
Q ss_pred cCCCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeC---CCcchH
Q 020194 189 RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLL 265 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~---DrpGLL 265 (329)
..+.. ...+.+. .+...+.|.+. ++||++
T Consensus 81 ~~~~~---------------------------------------------~~~v~~~---~~~a~VsvVG~gm~~~~Gv~ 112 (178)
T 2dtj_A 81 QVQGN---------------------------------------------WTNVLYD---DQVGKVSLVGAGMKSHPGVT 112 (178)
T ss_dssp TTTTT---------------------------------------------CSEEEEE---SCEEEEEEEEECCTTCHHHH
T ss_pred HHhcC---------------------------------------------CCeEEEe---CCeEEEEEEcCCcccCccHH
Confidence 11111 0123333 36788888886 999999
Q ss_pred HHHHHHHhcCCeEEEEEEEEecCCeEEEEEEE
Q 020194 266 FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297 (329)
Q Consensus 266 ~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v 297 (329)
+++.++|++.||||... +|-. ..-.|.|
T Consensus 113 arif~aLa~~~InI~~i--stSe--~~Is~vV 140 (178)
T 2dtj_A 113 AEFMEALRDVNVNIELI--STSE--IRISVLI 140 (178)
T ss_dssp HHHHHHHHHTTCCCCEE--EEET--TEEEEEE
T ss_pred HHHHHHHHHCCCCEEEE--EcCC--CeEEEEE
Confidence 99999999999999984 3332 3345666
No 24
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.43 E-value=0.00065 Score=62.10 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=48.8
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee--CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
..++++|.|+||||+.+.|+++|+++|+||.++..++. .+.+.-...+..+ +... ..+.|++.|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~--~~~~----~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD--TLPF----DLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG--GSSS----CHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC--CCCC----CHHHHHHHHHH
Confidence 46789999999999999999999999999999999975 4665444444321 1111 24667777654
No 25
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.34 E-value=0.06 Score=53.75 Aligned_cols=202 Identities=14% Similarity=0.135 Sum_probs=118.1
Q ss_pred EEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCC-C-C
Q 020194 28 TVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA-P-S 103 (329)
Q Consensus 28 ~~v~v~-~~Dr~GL~a~i~~~L~~~glnI~~A~i~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~-~-~ 103 (329)
+.|++. .++.+|..+++...|+.+|++|.--.... .+|..-..|.|...+- ++..+.+++ +..+.... + .
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~-----~~a~~~l~~-~~~el~~~~~~~ 344 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLL-----NTAEAVTSA-IAPALRSYPEAD 344 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGH-----HHHHHHHHH-HGGGGSSSTTCS
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHH-----HHHHHHHHH-HHHHhhcccccc
Confidence 334443 47899999999999999999995332222 4566666787644221 122222232 22221000 0 0
Q ss_pred cceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHH
Q 020194 104 LRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180 (329)
Q Consensus 104 ~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l 180 (329)
....+ ....+...|.|.|. .+||+.+++..+|++.|+||.... +. .....|.|.. +..++.
T Consensus 345 ~~~~v--~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~----------~d~~~A 408 (600)
T 3l76_A 345 QEAEI--IVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQ----------RDADRA 408 (600)
T ss_dssp SSSEE--EEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEG----------GGHHHH
T ss_pred Cccee--EecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcH----------HHHHHH
Confidence 01112 22346788999876 689999999999999999997554 32 3344565653 123444
Q ss_pred HHHHHHHHcCCCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEE-eC
Q 020194 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMR-SK 259 (329)
Q Consensus 181 ~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~-a~ 259 (329)
.+.|.+.+..... + .. .+. ..-+ ...-+-|..+. +.+.|.|. -+
T Consensus 409 v~aLh~~f~~~~t----~-~~---------~~~-------~~~~-----------~~~v~Gia~~~---~~a~i~i~~~~ 453 (600)
T 3l76_A 409 IAALSNAFGVTLS----P-PK---------NQT-------DTSH-----------LPAVRGVALDQ---DQAQIAIRHVP 453 (600)
T ss_dssp HHHHHHHTTCCBC----C-CC---------CCC-------C--------------CCSCCEEEEEC---SEEEEEEEEEE
T ss_pred HHHHHHhhcccCC----C-cc---------ccc-------cccc-----------cCceEEEEeeC---CEEEEEEecCC
Confidence 5566766643211 0 00 000 0000 00113455543 56667665 48
Q ss_pred CCcchHHHHHHHHhcCCeEEEEEEEEe
Q 020194 260 DRPKLLFDIVCTLTDMQYVVFHGMVNT 286 (329)
Q Consensus 260 DrpGLL~~I~~~l~~~~i~I~~a~I~T 286 (329)
|+||+.++|-..|++.||+|....-+.
T Consensus 454 ~~~g~~~~if~~La~~~I~vDmI~q~~ 480 (600)
T 3l76_A 454 DRPGMAAQLFTALAEANISVDMIIQSQ 480 (600)
T ss_dssp SSTTHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred CCccHHHHHHHHHHHcCCcEEEEEecc
Confidence 999999999999999999997665543
No 26
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.33 E-value=0.00076 Score=61.30 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=48.9
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee--CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
..++++|.|+||||+.+.|+++|+++|+||.+++.++. .+.+.-...+.-+ +... ..+.|++.|..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~~~~----~~~~L~~~f~~ 72 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA--AKVI----PLASLRTGFGV 72 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES--SCCC----CHHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcC--CCCC----CHHHHHHHHHH
Confidence 45789999999999999999999999999999999853 4565544444432 1111 24677777765
No 27
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.32 E-value=0.00075 Score=61.27 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=51.1
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee--CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCCC
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~ 192 (329)
..++++|.|+||||+.+.|+++|+++|+||.+++.++. .+.+.-...+..+ + .. ..+.|++.|.. +.++.
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~-~~----~~~~L~~~f~~-la~~l 78 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP--D-DF----DEAGFRAGLAE-RSEAF 78 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC--S-SC----CHHHHHHHHHH-HHGGG
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC--C-CC----CHHHHHHHHHH-HHHHc
Confidence 45789999999999999999999999999999999863 4555443333321 1 11 24778888765 44433
Q ss_pred C
Q 020194 193 D 193 (329)
Q Consensus 193 ~ 193 (329)
+
T Consensus 79 ~ 79 (286)
T 3n0v_A 79 G 79 (286)
T ss_dssp T
T ss_pred C
Confidence 3
No 28
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.27 E-value=0.00075 Score=61.31 Aligned_cols=68 Identities=19% Similarity=0.239 Sum_probs=47.7
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee--CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 020194 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (329)
Q Consensus 114 ~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 190 (329)
...++++|.|+||||+.+.|+++|+++|+||.++..++. .+.+.-...+..+ + ...+.|++.|.. +.+
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~------~~~~~L~~~f~~-la~ 74 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP--V------AGVNDFNSAFGK-VVE 74 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC--C---------CHHHHHHHH-HHG
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC--C------CCHHHHHHHHHH-HHH
Confidence 346799999999999999999999999999999999853 4554433333221 1 123467777765 444
No 29
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.24 E-value=0.00093 Score=60.82 Aligned_cols=68 Identities=12% Similarity=0.205 Sum_probs=47.4
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee--CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 115 ~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
..+++++.|+||||+.+.|+++|+++|+||.+++.++. .|.+.-...+..+..+... ..+.|++.|..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~ 78 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEP 78 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHH
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHH
Confidence 46789999999999999999999999999999999963 4555433333321001011 24667777764
No 30
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.17 E-value=0.0016 Score=54.06 Aligned_cols=63 Identities=14% Similarity=0.217 Sum_probs=50.0
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeC--CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 116 ~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~--~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
...|.|.+.|+||+|++|+++|+++|+||.+..+.+.. +....+|.+.. +...+++|.+.|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999998654 34445555542 14677888888887
No 31
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.17 E-value=0.0018 Score=53.92 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=78.0
Q ss_pred CCCeEEEEEEe-CCCccHHHHHHHHHHhCCCcEEEEEEEee---CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHH
Q 020194 113 TEEHTSIEFTG-TDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188 (329)
Q Consensus 113 ~~~~~~i~v~~-~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~---~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L 188 (329)
..+...|+|.+ +|+||.++++.++|+++|+||..-..... .|...-.|.|... +. ++..+.|.+ +
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~-------d~---~~a~~~L~~-~ 81 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD-------FA---QEALEALEP-V 81 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG-------GH---HHHHHHHHH-H
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH-------HH---HHHHHHHHH-H
Confidence 44677777776 89999999999999999999975443321 1244456777541 11 222233332 1
Q ss_pred cCCCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeCC---CcchH
Q 020194 189 RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD---RPKLL 265 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~D---rpGLL 265 (329)
..+.. . .+.++ .....+.|.+.+ +||++
T Consensus 82 ~~~~~--------------------------------------------~--~v~~~---~~~a~vsvVG~gm~~~~Gv~ 112 (167)
T 2dt9_A 82 LAEIG--------------------------------------------G--EAILR---PDIAKVSIVGVGLASTPEVP 112 (167)
T ss_dssp HHHHC--------------------------------------------C--EEEEE---CSEEEEEEEESSGGGSTHHH
T ss_pred HHHhC--------------------------------------------C--cEEEe---CCEEEEEEECCCcccCcCHH
Confidence 11000 0 12222 367888999876 99999
Q ss_pred HHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEe
Q 020194 266 FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299 (329)
Q Consensus 266 ~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~ 299 (329)
+++.++|++.||||.... |- + ..=.|.|..
T Consensus 113 a~~f~aL~~~~InI~~is--~S-e-~~is~vv~~ 142 (167)
T 2dt9_A 113 AKMFQAVASTGANIEMIA--TS-E-VRISVIIPA 142 (167)
T ss_dssp HHHHHHHHHTTCCCCEEE--EC-S-SEEEEEEEG
T ss_pred HHHHHHHHHCCCCEEEEE--cc-C-CEEEEEEeH
Confidence 999999999999996553 33 2 244565643
No 32
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=97.15 E-value=0.0037 Score=52.76 Aligned_cols=137 Identities=16% Similarity=0.223 Sum_probs=84.3
Q ss_pred CeEEEEE-EecCCccHHHHHHHHHHhCCceEEEEEEE-ec--CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCC
Q 020194 26 DATVIKV-DSVNKHGILLQVIQVLNDVNLVIKKAYIS-SD--GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101 (329)
Q Consensus 26 ~~~~v~v-~~~Dr~GL~a~i~~~L~~~glnI~~A~i~-t~--~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~ 101 (329)
+.+.|+| ..+|+||.++++..+|+++|+||.--... +. .|..-..|.|...+. +...+.|++ +..+..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~-----~~a~~~L~~-~~~el~-- 86 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG-----PAAVEKLDS-LRNEIG-- 86 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTH-----HHHHHHHHH-THHHHC--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHH-----HHHHHHHHH-HHHhcC--
Confidence 4555655 37899999999999999999999744332 22 566666788754332 122222332 111111
Q ss_pred CCcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHH
Q 020194 102 PSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178 (329)
Q Consensus 102 ~~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~ 178 (329)
...+. -..+...|.|.|. +.||+.+++..+|++.|+||.... |. ...-.|.|.. +..+
T Consensus 87 ---~~~v~--~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tS--ei~Is~vV~~----------~d~~ 147 (181)
T 3s1t_A 87 ---FSQLL--YDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRD----------TELD 147 (181)
T ss_dssp ---CSEEE--EESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEG----------GGHH
T ss_pred ---cceEE--EeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cC--CCEEEEEEeH----------HHHH
Confidence 00111 2235777888766 899999999999999999998655 32 2234455543 1234
Q ss_pred HHHHHHHHHHc
Q 020194 179 TIKELLFNVLR 189 (329)
Q Consensus 179 ~l~~~L~~~L~ 189 (329)
+.-+.|.+.|.
T Consensus 148 ~Av~aLH~~f~ 158 (181)
T 3s1t_A 148 KAVVALHEAFG 158 (181)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 44456666663
No 33
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.14 E-value=0.0018 Score=53.88 Aligned_cols=64 Identities=11% Similarity=0.030 Sum_probs=49.7
Q ss_pred eEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecC--CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH
Q 020194 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR--TEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321 (329)
Q Consensus 251 ~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g--~~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~~~ 321 (329)
...|+|.+.||||+|++|+.+|++.|+||.+..+.+.. +...=+|-+. . . .+..+.|...|...
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~--d----~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G--D----EKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S--C----HHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c--c----HHHHHHHHHHHcCC
Confidence 36789999999999999999999999999999987443 4466666665 2 1 45678888887643
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.01 E-value=0.003 Score=52.46 Aligned_cols=63 Identities=11% Similarity=0.137 Sum_probs=50.1
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeC--CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 116 ~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~--~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
...|.|...|+||+|++|+++|+++|+||.+..+.+.. +....+|.|.. ++..+++|.+.|.+
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~K 68 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcC
Confidence 35789999999999999999999999999999997654 44445566653 13677888888877
No 35
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.92 E-value=0.0025 Score=52.97 Aligned_cols=64 Identities=11% Similarity=0.072 Sum_probs=49.8
Q ss_pred eEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecC--CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH
Q 020194 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR--TEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321 (329)
Q Consensus 251 ~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g--~~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~~~ 321 (329)
...|+|.+.|+||+|.+|+.+|++.|+||.+..+.+.. +...=+|-+... .+..+.|...|.+.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d-------~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP-------DEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC-------HHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc-------HHHHHHHHHHhcCC
Confidence 36789999999999999999999999999999986433 456666666532 45677888887643
No 36
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.74 E-value=0.0047 Score=51.20 Aligned_cols=58 Identities=9% Similarity=-0.012 Sum_probs=43.5
Q ss_pred EEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHH
Q 020194 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319 (329)
Q Consensus 253 ~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~ 319 (329)
-|+|.|.||+|||++|+++|++.+++|..+.+.+.|. +|+.-+ ..+.+....|...+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~----~~~~~~~~~L~~~l~ 59 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA----ELEFESFSSLMAEIR 59 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC----CCCHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE----eCCHHHHHHHHHHHH
Confidence 3789999999999999999999999999999977643 455433 122345566665544
No 37
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=96.54 E-value=0.061 Score=51.29 Aligned_cols=107 Identities=19% Similarity=0.324 Sum_probs=72.8
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCC
Q 020194 26 DATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101 (329)
Q Consensus 26 ~~~~v~v~-~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~ 101 (329)
+.+.|+|. .+|+||.++++...|+++|+||.--...+. .|.....|.|...+. ++..+.|++ +..+...
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~~~~- 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDG-----RRAMEILKK-LQVQGNW- 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTH-----HHHHHHHHH-HHTTTTC-
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechhH-----HHHHHHHHH-HHHHcCC-
Confidence 45567777 689999999999999999999986544332 455555787754221 233333443 3222210
Q ss_pred CCcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEE
Q 020194 102 PSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVV 145 (329)
Q Consensus 102 ~~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~ 145 (329)
..+.. ..+...|.|.|. +.||.++++..+|++.|+||.
T Consensus 336 ----~~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~ 376 (421)
T 3ab4_A 336 ----TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIE 376 (421)
T ss_dssp ----SEEEE--ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCC
T ss_pred ----ceEEE--eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEE
Confidence 01222 245677888875 789999999999999999998
No 38
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.32 E-value=0.0082 Score=51.46 Aligned_cols=112 Identities=13% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCCeEEEEEE-ecCCccHHHHHHHHHHhCCceEEEEEEEe---cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccC
Q 020194 24 CADATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS---DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99 (329)
Q Consensus 24 ~~~~~~v~v~-~~Dr~GL~a~i~~~L~~~glnI~~A~i~t---~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~ 99 (329)
..+...|++. .+|+||..+++.++|++.|+||---.... .++.....|.+...+.. ...+.+++ +..+..
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~~-----~~~~~l~~-~~~~~~ 105 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGP-----AAVEKLDS-LRNEIG 105 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGHH-----HHHHHHHT-THHHHC
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhHH-----HHHHHHHH-HHhhhc
Confidence 3456777776 69999999999999999999997443221 34566667876542221 12222221 211111
Q ss_pred CCCCcceeeeecCCCCeEEEEEE---eCCCccHHHHHHHHHHhCCCcEEEEE
Q 020194 100 FAPSLRSSVGVMPTEEHTSIEFT---GTDRPGLFSEVCAVLADLHCNVVNAE 148 (329)
Q Consensus 100 ~~~~~~~~v~~~~~~~~~~i~v~---~~Dr~Gll~~i~~~l~~~g~~I~~A~ 148 (329)
...+. .+.+...|.|. .+..||+.+++..+|++.|+||.--.
T Consensus 106 -----~~~v~--~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 106 -----FSQLL--YDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp -----CSEEE--EECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -----eeeEE--EecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 00111 12345556665 46799999999999999999998553
No 39
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.31 E-value=0.015 Score=49.39 Aligned_cols=63 Identities=14% Similarity=0.282 Sum_probs=47.7
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee-C-CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N-DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 116 ~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~-~-~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
...|+|...|+||.|++|+++|++.|+||.+..+... + +....++.|..+ +..+++|.+.|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcC
Confidence 5689999999999999999999999999999888743 3 334455666541 1356777777665
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.23 E-value=0.015 Score=49.37 Aligned_cols=63 Identities=6% Similarity=0.079 Sum_probs=47.5
Q ss_pred eEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEE-ecC-CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 020194 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN-TGR-TEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320 (329)
Q Consensus 251 ~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~-T~g-~~~~D~F~v~~~~g~~l~~~~~~~~l~~~L~~ 320 (329)
...|+|...|+||.|++|+.+|+..|+||.+..+. |.. +...=++-|... ....++|...|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcC
Confidence 47899999999999999999999999999998886 444 344445555433 1346777777654
No 41
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.19 E-value=0.094 Score=44.00 Aligned_cols=123 Identities=14% Similarity=0.075 Sum_probs=76.4
Q ss_pred CeEEEEEE-eCCCccHHHHHHHHHHhCCCcEEEEEEEee---CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 020194 115 EHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (329)
Q Consensus 115 ~~~~i~v~-~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~---~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 190 (329)
+.+.|+|. .+|+||.+++|...|+++|+||..-..... .|.....|.|... +. ++..+.|.+ +..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-------~~---~~a~~~L~~-~~~ 83 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------VG---PAAVEKLDS-LRN 83 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-------TH---HHHHHHHHH-THH
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-------HH---HHHHHHHHH-HHH
Confidence 45555553 679999999999999999999974433222 2344556777541 11 222233332 111
Q ss_pred CCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeC---CCcchHHH
Q 020194 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFD 267 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~---DrpGLL~~ 267 (329)
+.. ..+|.++ .....+.|.+. ++||++++
T Consensus 84 el~---------------------------------------------~~~v~~~---~~va~VsvVG~gm~~~~Gvaa~ 115 (181)
T 3s1t_A 84 EIG---------------------------------------------FSQLLYD---DHIGKVSLIGAGMRSHPGVTAT 115 (181)
T ss_dssp HHC---------------------------------------------CSEEEEE---SCEEEEEEEEECCTTCHHHHHH
T ss_pred hcC---------------------------------------------cceEEEe---CCEEEEEEEecccccCchHHHH
Confidence 000 0123333 25677888765 89999999
Q ss_pred HHHHHhcCCeEEEEEEEEecCCeEEEEEEEEeC
Q 020194 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300 (329)
Q Consensus 268 I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~ 300 (329)
+.++|++.||+|.... |- ...=.|.|...
T Consensus 116 ~f~aLa~~~InI~~Is--tS--ei~Is~vV~~~ 144 (181)
T 3s1t_A 116 FCEALAAVGVNIELIS--TS--EIRISVLCRDT 144 (181)
T ss_dssp HHHHHHHTTCCCCEEE--EE--TTEEEEEEEGG
T ss_pred HHHHHHHCCCcEEEEE--cC--CCEEEEEEeHH
Confidence 9999999999998877 32 33334656443
No 42
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.17 E-value=0.011 Score=51.01 Aligned_cols=48 Identities=10% Similarity=0.067 Sum_probs=35.5
Q ss_pred eEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecC-----CeEEEEEEEE
Q 020194 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-----TEAYQEFYIR 298 (329)
Q Consensus 251 ~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g-----~~~~D~F~v~ 298 (329)
...|.|.+.||||+|++|+++|+++++||......+.. ..+.-.+.+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 46789999999999999999999999999999998854 2444445554
No 43
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.10 E-value=0.012 Score=50.70 Aligned_cols=47 Identities=17% Similarity=0.137 Sum_probs=36.2
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEec-----CCEEEEEEEE
Q 020194 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-----GGWFMDVFNV 73 (329)
Q Consensus 27 ~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~-----~g~~~d~F~V 73 (329)
...+.|.+.||||+|++++.+|++++.||...+..+. +|.+.-.+.+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV 55 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEI 55 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEE
Confidence 4678999999999999999999999999999999873 5666655544
No 44
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.95 E-value=0.034 Score=45.87 Aligned_cols=59 Identities=19% Similarity=0.137 Sum_probs=45.0
Q ss_pred EEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 118 ~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
.|.|.|.||+|++++|+.+|+.+++||..+.+.+. |. +++.-+ . .+.+....|...+.+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~--~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFA--E---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEEC--C---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEE--e---CCHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999765 32 455542 1 124566777776665
No 45
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.84 E-value=0.13 Score=48.90 Aligned_cols=109 Identities=15% Similarity=0.139 Sum_probs=72.3
Q ss_pred CeEEEEEE-eCCCccHHHHHHHHHHhCCCcEEEEEEEee---CCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 020194 115 EHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (329)
Q Consensus 115 ~~~~i~v~-~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~---~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 190 (329)
+.+.|+|. .+|+||.+++|.+.|+++|+||..-...+. .+.....|.|... +. ++..+.|.+ +..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~---~~a~~~l~~-~~~ 331 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DG---RRAMEILKK-LQV 331 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------TH---HHHHHHHHH-HHT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hH---HHHHHHHHH-HHH
Confidence 44566776 589999999999999999999986554343 2334456666531 12 222333433 222
Q ss_pred CCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeC---CCcchHHH
Q 020194 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFD 267 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~---DrpGLL~~ 267 (329)
+.. . ..+.++ .+...+.|.+. ++||++++
T Consensus 332 ~~~-------~--------------------------------------~~v~~~---~~~a~vsvVG~gm~~~~Gv~a~ 363 (421)
T 3ab4_A 332 QGN-------W--------------------------------------TNVLYD---DQVGKVSLVGAGMKSHPGVTAE 363 (421)
T ss_dssp TTT-------C--------------------------------------SEEEEE---CCEEEEEEECGGGTSCTTHHHH
T ss_pred HcC-------C--------------------------------------ceEEEe---CCeEEEEEEccCcccCccHHHH
Confidence 111 0 123332 36788888885 89999999
Q ss_pred HHHHHhcCCeEEEEE
Q 020194 268 IVCTLTDMQYVVFHG 282 (329)
Q Consensus 268 I~~~l~~~~i~I~~a 282 (329)
+.++|++.||||...
T Consensus 364 ~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 364 FMEALRDVNVNIELI 378 (421)
T ss_dssp HHHHHHHTTCCCCEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 999999999999954
No 46
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=95.43 E-value=0.15 Score=49.39 Aligned_cols=106 Identities=12% Similarity=0.194 Sum_probs=71.4
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHh--------
Q 020194 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-------- 94 (329)
Q Consensus 26 ~~~~v~v~~---~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L-------- 94 (329)
+...|+|.+ .++||..+++..+|+++|+||.--...+.. .-.+|.|...+ .++..+.|++.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~d-----~~~a~~~L~~~l~~~~~~~~ 389 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEED-----VDKALKALKREFGDFGKKSF 389 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGGG-----HHHHHHHHHHHHCC----CT
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEechH-----HHHHHHHHHHHHhhhccccc
Confidence 566778885 678899999999999999999865543322 22347765432 135566666656
Q ss_pred ccccCCCCCcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEE
Q 020194 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVV 145 (329)
Q Consensus 95 ~~~~~~~~~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~ 145 (329)
..+.. -..+.. ..+...|.|.|. ++||..+++..+|++.|+||.
T Consensus 390 ~~~~~-----~~~v~~--~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 390 LNNNL-----IRDVSV--DKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp TSCCC-----EEEEEE--EEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCC
T ss_pred ccccc-----cceEEE--eCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEE
Confidence 22100 001111 235667888876 589999999999999999993
No 47
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.41 E-value=0.12 Score=44.05 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=74.9
Q ss_pred CCCeEEEEEE-eCCCccHHHHHHHHHHhCCCcEEEEEEEee--CC-eEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHH
Q 020194 113 TEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH--ND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188 (329)
Q Consensus 113 ~~~~~~i~v~-~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~-~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L 188 (329)
+.+...|+|. .+|+||+.++|.+.|++.|+||.---.... .+ .....|.+... ..++..+.|.+ +
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~----------d~~~~~~~l~~-~ 100 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD----------VGPAAVEKLDS-L 100 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG----------GHHHHHHHHHT-T
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh----------hHHHHHHHHHH-H
Confidence 4456677776 589999999999999999999875432221 22 33345666531 11222222221 1
Q ss_pred cCCCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEe---CCCcchH
Q 020194 189 RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRS---KDRPKLL 265 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a---~DrpGLL 265 (329)
..+.. ..++.+++ +...+.|.+ ..+||+.
T Consensus 101 ~~~~~---------------------------------------------~~~v~~~~---~iakVSvVG~GM~~~~GVa 132 (200)
T 4go7_X 101 RNEIG---------------------------------------------FSQLLYDD---HIGKVSLIGAGMRSHPGVT 132 (200)
T ss_dssp HHHHC---------------------------------------------CSEEEEEC---CEEEEEEEEESCTTCHHHH
T ss_pred Hhhhc---------------------------------------------eeeEEEec---CeeeeeeeccccccCCCcH
Confidence 00000 01233332 455666665 6899999
Q ss_pred HHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEe
Q 020194 266 FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299 (329)
Q Consensus 266 ~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~ 299 (329)
+++.++|++.||||.... | ....=.|.|..
T Consensus 133 ak~F~aLa~~~INI~mIs--t--SEi~IS~vV~~ 162 (200)
T 4go7_X 133 ATFCEALAAVGVNIELIS--T--SEIRISVLCRD 162 (200)
T ss_dssp HHHHHHHHHTTCCCCEEE--E--CSSEEEEEEEG
T ss_pred HHHHHHHHHCCCCEEEEE--c--cCCEEEEEEeH
Confidence 999999999999999875 3 23334455643
No 48
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.56 E-value=0.49 Score=45.68 Aligned_cols=131 Identities=14% Similarity=0.128 Sum_probs=78.6
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 020194 114 EEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (329)
Q Consensus 114 ~~~~~i~v~~---~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 190 (329)
.+...|.|.+ .++||+++++..+|+++|+||..-...+. .....|.|... ..++..+.|.+.+-+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts--e~~Is~~V~~~----------d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS--ETNISLVVSEE----------DVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT--TCCEEEEEEGG----------GHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC--CCEEEEEEech----------HHHHHHHHHHHHHhh
Confidence 3566788886 67889999999999999999876554332 23455666541 123333444444411
Q ss_pred CCCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeC---CCcchHHH
Q 020194 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFD 267 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~---DrpGLL~~ 267 (329)
... .... .. ..| ..+.++ .+..++.|.+. ++||++++
T Consensus 384 ~~~-----~~~~--------~~--------~~~----------------~~v~~~---~~~a~vsvVG~gm~~~~Gvaak 423 (473)
T 3c1m_A 384 FGK-----KSFL--------NN--------NLI----------------RDVSVD---KDVCVISVVGAGMRGAKGIAGK 423 (473)
T ss_dssp ---------CTT--------SC--------CCE----------------EEEEEE---EEEEEEEEECTTTTTCTTHHHH
T ss_pred hcc-----cccc--------cc--------ccc----------------ceEEEe---CCcEEEEEEecCCCCChhHHHH
Confidence 000 0000 00 001 123333 26788899885 69999999
Q ss_pred HHHHHhcCCeEEEEEEEEecCCe-EEEEEEEEe
Q 020194 268 IVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRH 299 (329)
Q Consensus 268 I~~~l~~~~i~I~~a~I~T~g~~-~~D~F~v~~ 299 (329)
+.++|++.||||... ++|.. ..=.|.|..
T Consensus 424 ~f~aL~~~~InI~mi---sqgtSe~~Is~vV~~ 453 (473)
T 3c1m_A 424 IFTAVSESGANIKMI---AQGSSEVNISFVIDE 453 (473)
T ss_dssp HHHHHHHHTCCCCEE---EESSCSSEEEEEEEG
T ss_pred HHHHHHHCCCCEEEE---ecCCCCceEEEEEcH
Confidence 999999999999443 33333 333455543
No 49
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=93.00 E-value=0.71 Score=44.25 Aligned_cols=121 Identities=16% Similarity=0.245 Sum_probs=73.0
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCC
Q 020194 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (329)
Q Consensus 26 ~~~~v~v~~---~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~ 102 (329)
+.+.|+|.+ ++.+|..+++..+|+.+|++|.-.. +... -.+|.|...+-.. ...++.+.++..+...
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~~~~--~is~~V~~~d~~~-~~~~~~~el~~~~~~~----- 366 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--SGVD--SVSLVIEDCKLDG-KCDKIIEEIKKQCNPD----- 366 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--EETT--EEEEEEEHHHHTT-THHHHHHHHHHHSCCS-----
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--cCCC--EEEEEEecchHHH-HHHHHHHHHHHhcCCC-----
Confidence 345567765 6899999999999999999997432 2111 2246664432110 0112333333322110
Q ss_pred CcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEe
Q 020194 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (329)
Q Consensus 103 ~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~ 164 (329)
.+. -..+...|.|+|. ..||+.+++..+|++.|+||....-.|. ...-.|.|..
T Consensus 367 ----~v~--v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtS--ei~Is~vV~~ 423 (446)
T 3tvi_A 367 ----SIE--IHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS--EINVIVGVET 423 (446)
T ss_dssp ----EEE--EEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSC--TTEEEEEEEG
T ss_pred ----cEE--EeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCC--CceEEEEEcH
Confidence 111 1235678888876 5899999999999999999875433232 2334455543
No 50
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.48 E-value=0.56 Score=44.35 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=43.2
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEe
Q 020194 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299 (329)
Q Consensus 250 ~~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~ 299 (329)
+...|-+.-.|+||.+..|+.+|.++||||......+.|+.+.-++-+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 34556688899999999999999999999999999998888877776643
No 51
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.20 E-value=0.68 Score=43.79 Aligned_cols=48 Identities=13% Similarity=0.222 Sum_probs=42.1
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEE
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V 73 (329)
+...+.+.-+|+||.+++++.+|.++|+||...+..+.++.++-++.+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 456788999999999999999999999999999999988888755554
No 52
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=90.70 E-value=1.6 Score=39.95 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=38.5
Q ss_pred EEEEEEeC--CCcchHHHHHHHHhcCCeEEEEEEEEecCC-eEEEEEEEEeCCCCC
Q 020194 252 TVITMRSK--DRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLP 304 (329)
Q Consensus 252 t~l~v~a~--DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~-~~~D~F~v~~~~g~~ 304 (329)
+.+-+... |+||-||++-..|+.+|||+.+..-.-.+. .-+=.||| |.+|+.
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~ 261 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAP 261 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCT
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCc
Confidence 33334443 799999999999999999999887664444 45567776 666765
No 53
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.68 E-value=0.61 Score=41.90 Aligned_cols=54 Identities=17% Similarity=0.077 Sum_probs=42.4
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecC-CeEEEEEEEEeCCCCC
Q 020194 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLP 304 (329)
Q Consensus 250 ~~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g-~~~~D~F~v~~~~g~~ 304 (329)
..|.|-+..+|+||-||++...|+.+|||+.+..-.-.+ ..-+=.||| |.+|+.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCC
Confidence 356666777899999999999999999999988866444 446778888 555765
No 54
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.39 E-value=0.57 Score=44.47 Aligned_cols=56 Identities=21% Similarity=0.280 Sum_probs=44.6
Q ss_pred cCCCEEEEEeCCCCCeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEE
Q 020194 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMD 69 (329)
Q Consensus 12 ~~~~~V~v~~~~~~~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d 69 (329)
+|.|.|... ...+...|.+.-+|.||.+.+|..+|+++|+||..-...|.+++++-
T Consensus 330 Vn~p~~~~~--~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~ 385 (416)
T 3k5p_A 330 VNFPQVQLP--PRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYL 385 (416)
T ss_dssp SSSCCCCCC--CCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEE
T ss_pred eeCCCcCCC--CCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEE
Confidence 444555442 22357899999999999999999999999999998777788877753
No 55
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.27 E-value=0.91 Score=44.44 Aligned_cols=50 Identities=16% Similarity=0.298 Sum_probs=41.0
Q ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEee--CCeEEEEEEE
Q 020194 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV 162 (329)
Q Consensus 113 ~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~--~~~~~d~f~V 162 (329)
......+.+.-+|+||.+..++..|.++|+||.+.++... ++.+.-++.+
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v 502 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL 502 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE
Confidence 3456788899999999999999999999999999999875 3445555544
No 56
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=89.74 E-value=3.6 Score=39.99 Aligned_cols=138 Identities=14% Similarity=0.163 Sum_probs=81.6
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCC-cHHHHHHHHHHhccccCCC
Q 020194 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIR-DKEVIDYIQQRLETDASFA 101 (329)
Q Consensus 26 ~~~~v~v~~---~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~-~~~~~~~ie~~L~~~~~~~ 101 (329)
+.+.|+|.+ .+++|..+++..+|+++|+||.--. .+... .+|.|...+..... ..+..+.+...|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~-sse~s---is~~v~~~~~~~~~~~~~~l~~~~~el~~~~--- 412 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA-TSEVS---ISLTLDPSKLWSRELIQQELDHVVEELEKIA--- 412 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE-EETTE---EEEEECCGGGSSSCCCHHHHHHHHHHHTTTS---
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE-eCCCe---EEEEEechHhhhhhHHHHHHHHHHHHhCCCC---
Confidence 455667774 6789999999999999999998552 22222 23665332211100 1223333333333211
Q ss_pred CCcceeeeecCCCCeEEEEEEeC--CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHH
Q 020194 102 PSLRSSVGVMPTEEHTSIEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179 (329)
Q Consensus 102 ~~~~~~v~~~~~~~~~~i~v~~~--Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~ 179 (329)
.+.. ..+...|.|+|. ..||+.+++..+|++.|+||....--+ ...--.|.|.. +..++
T Consensus 413 -----~v~~--~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGs--Sei~Is~vV~~----------~d~~~ 473 (510)
T 2cdq_A 413 -----VVNL--LKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGA--SKVNISFIVNE----------AEAEG 473 (510)
T ss_dssp -----EEEE--EEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECT--TCSEEEEEEEH----------HHHHH
T ss_pred -----eEEE--eCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecC--CcceEEEEEeH----------HHHHH
Confidence 1111 235667888887 778999999999999999987432211 23344566653 33455
Q ss_pred HHHHHHHHHc
Q 020194 180 IKELLFNVLR 189 (329)
Q Consensus 180 l~~~L~~~L~ 189 (329)
.-+.|++.+-
T Consensus 474 Av~aLH~~f~ 483 (510)
T 2cdq_A 474 CVQALHKSFF 483 (510)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5556666664
No 57
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=89.64 E-value=1.3 Score=42.31 Aligned_cols=122 Identities=9% Similarity=0.075 Sum_probs=74.7
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCC
Q 020194 115 EHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191 (329)
Q Consensus 115 ~~~~i~v~~---~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~ 191 (329)
+.+.|.|.+ .+.||++++|..+|+++|++|... .+ + .....|.|... . +. ....++.+.|...+.
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~-~-~~~is~~V~~~---d-~~--~~~~~~~~el~~~~~-- 364 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PS-G-VDSVSLVIEDC---K-LD--GKCDKIIEEIKKQCN-- 364 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CE-E-TTEEEEEEEHH---H-HT--TTHHHHHHHHHHHSC--
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ec-C-CCEEEEEEecc---h-HH--HHHHHHHHHHHHhcC--
Confidence 355677775 589999999999999999998743 22 1 22345666541 0 00 012223333332111
Q ss_pred CCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeC---CCcchHHHH
Q 020194 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFDI 268 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~---DrpGLL~~I 268 (329)
...|.+++ +...+.|.+. .+||+.+++
T Consensus 365 -----------------------------------------------~~~v~v~~---~vA~VSvVG~gM~~~~Gvaari 394 (446)
T 3tvi_A 365 -----------------------------------------------PDSIEIHP---NMALVATVGTGMAKTKGIANKI 394 (446)
T ss_dssp -----------------------------------------------CSEEEEEE---EEEEEEEECGGGSSCTTHHHHH
T ss_pred -----------------------------------------------CCcEEEeC---CeEEEEEECCCccCChhHHHHH
Confidence 01233332 5678888875 699999999
Q ss_pred HHHHhcCCeEEEEEEEEecCCeEEEEEEEEeC
Q 020194 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300 (329)
Q Consensus 269 ~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~ 300 (329)
.++|++.||+|....-.| ....=.|.|...
T Consensus 395 f~aLa~~~InI~mIsqgt--Sei~Is~vV~~~ 424 (446)
T 3tvi_A 395 FTALSKENVNIRMIDQGS--SEINVIVGVETV 424 (446)
T ss_dssp HHHHHHTTCCEEEEEECS--CTTEEEEEEEGG
T ss_pred HHHHHHCCCCEEEEEecC--CCceEEEEEcHH
Confidence 999999999998764222 233344656443
No 58
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=89.46 E-value=0.77 Score=41.83 Aligned_cols=55 Identities=18% Similarity=0.136 Sum_probs=42.0
Q ss_pred CCeEEEEEEeC-CCcchHHHHHHHHhcCCeEEEEEEEEecC-CeEEEEEEEEeCCCCC
Q 020194 249 KDYTVITMRSK-DRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLP 304 (329)
Q Consensus 249 ~~~t~l~v~a~-DrpGLL~~I~~~l~~~~i~I~~a~I~T~g-~~~~D~F~v~~~~g~~ 304 (329)
...|.|-+..+ |+||-||++...|+.+|||+.+..-.-.+ ..-+=.||| |.+|+.
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~ 255 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSI-DADGHA 255 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEE-EEESCT
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEE-EEeCCC
Confidence 35677777775 99999999999999999999887765333 334567888 455765
No 59
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.03 E-value=3.1 Score=39.35 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=41.7
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEE
Q 020194 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162 (329)
Q Consensus 114 ~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V 162 (329)
.+...|.+.-+|.||.+.+|+.+|+++|+||..-...|.++.+..+.-|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 3578999999999999999999999999999998888877765444444
No 60
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=88.91 E-value=0.79 Score=43.89 Aligned_cols=51 Identities=24% Similarity=0.265 Sum_probs=36.4
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEec--CCeEEEEEEEEeC
Q 020194 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHV 300 (329)
Q Consensus 250 ~~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~--g~~~~D~F~v~~~ 300 (329)
..+-+.+...|+||.|.+|+.+|.++||+|.+..=.-. ++.......+|+.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~ 410 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHV 410 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECS
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEecc
Confidence 56778888999999999999999999999988653211 1112455557765
No 61
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=88.65 E-value=2.3 Score=41.53 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=46.8
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCcHHHHHHHHH
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~ 92 (329)
.+..+.+.-+|+||...+++..|.++|+||...++.. .+|.++-.+.+.+ . + +++..+.|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~---~-~-~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ---D-V-PDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS---C-C-CHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC---C-C-CHHHHHHHhc
Confidence 4677888999999999999999999999999999985 5666764454422 1 1 2456666654
No 62
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=88.61 E-value=4.1 Score=37.30 Aligned_cols=51 Identities=18% Similarity=0.109 Sum_probs=38.1
Q ss_pred EEEEEEeC--CCccHHHHHHHHHHhCCCcEEEEEEEeeCCe-EEEEEEEEeCCCCC
Q 020194 117 TSIEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGY 169 (329)
Q Consensus 117 ~~i~v~~~--Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~-~~d~f~V~~~~~g~ 169 (329)
+.+.+..+ |+||-|+++.+.|+.+|+|...-......++ +.-.|||.- +|.
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 260 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAA 260 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSC
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCC
Confidence 44444444 7999999999999999999887777766554 456788765 354
No 63
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=88.36 E-value=1.3 Score=39.69 Aligned_cols=64 Identities=19% Similarity=0.138 Sum_probs=47.3
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeCC-eEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 020194 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (329)
Q Consensus 116 ~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~-~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (329)
.|.|.+..+|+||-|+++.+.|+.+|+|+..-......+ .+.-.|||.- +|.. .+ +.++++|.+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~~-~d----~~v~~aL~~ 264 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGHR-ED----QNVHNALEN 264 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESCT-TS----HHHHHHHHH
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecCC-Cc----HHHHHHHHH
Confidence 466777778999999999999999999988777776554 4677888875 3543 33 445555554
No 64
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=88.02 E-value=1.1 Score=39.79 Aligned_cols=49 Identities=14% Similarity=0.192 Sum_probs=38.8
Q ss_pred CeEEEEEEe---CCCcchHHHHHHHHhcCCeEEEEEEEEecC-CeEEEEEEEE
Q 020194 250 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298 (329)
Q Consensus 250 ~~t~l~v~a---~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g-~~~~D~F~v~ 298 (329)
..|.|-+.. +|+||-||++...|+.+|||+.+..-.-.+ ..-+=.|||.
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD 237 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQ 237 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEE
Confidence 455666666 899999999999999999999988765444 4466788884
No 65
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=87.72 E-value=0.89 Score=36.82 Aligned_cols=113 Identities=15% Similarity=0.116 Sum_probs=66.3
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCC
Q 020194 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (329)
Q Consensus 26 ~~~~v~v~~---~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~ 102 (329)
+...|++.+ ++.||..+++..+|+++|+||.--. +... -.+|.|.+.+ ...++.+ .|...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~----~~~~il~----~l~~~----- 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK----NLPDIVR----ALSDI----- 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT----THHHHHH----HHTTT-----
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH----HHHHHHH----HHhcc-----
Confidence 567788874 5788999999999999999996332 2221 2347664322 0112222 22211
Q ss_pred CcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEe
Q 020194 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (329)
Q Consensus 103 ~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~ 164 (329)
..+.. ..+...|.|.|. +.||+.+++..+|+ |+||....-.+ ....-.|.|..
T Consensus 80 ---~~v~~--~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~--Se~~is~vv~~ 135 (157)
T 3mah_A 80 ---GDVTV--DKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGG--SNYNVSVLVKA 135 (157)
T ss_dssp ---EEEEE--EEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECS--SSSCEEEEEEG
T ss_pred ---CeEEE--eCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCC--CCCEEEEEEcH
Confidence 11111 235677888875 68999999999999 89987543222 22334555553
No 66
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=86.22 E-value=3.4 Score=36.69 Aligned_cols=50 Identities=24% Similarity=0.238 Sum_probs=40.0
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCCcEEEEEEEeeCC-eEEEEEEEEe
Q 020194 115 EHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD 164 (329)
Q Consensus 115 ~~~~i~v~~---~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~-~~~d~f~V~~ 164 (329)
..|.|.+.. +|+||-|+++.+.|+.+|+|+..-......+ .+.-.|||.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 456666666 8999999999999999999988777776554 4567888875
No 67
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=85.28 E-value=2.2 Score=38.87 Aligned_cols=50 Identities=16% Similarity=0.212 Sum_probs=39.5
Q ss_pred CeEEEEEEeC-CCccHHHHHHHHHHhCCCcEEEEEEEeeCC-eEEEEEEEEe
Q 020194 115 EHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD 164 (329)
Q Consensus 115 ~~~~i~v~~~-Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~-~~~d~f~V~~ 164 (329)
..|.|.+..+ |+||-|+++.+.|+.+|+|+..-......+ .+.-.|||.-
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 251 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA 251 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE
Confidence 4577777775 999999999999999999988777666543 3456788865
No 68
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=79.15 E-value=27 Score=33.84 Aligned_cols=123 Identities=11% Similarity=0.146 Sum_probs=73.9
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHcCC
Q 020194 115 EHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191 (329)
Q Consensus 115 ~~~~i~v~~---~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~ 191 (329)
+.+.|.|.+ .+.+|++++|..+|+++|++|..-. +. ...-.|.|... +.... + ...+.++. +.+.|..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--ss--e~sis~~v~~~-~~~~~-~-~~~~~l~~-~~~el~~- 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TS--EVSISLTLDPS-KLWSR-E-LIQQELDH-VVEELEK- 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EE--TTEEEEEECCG-GGSSS-C-CCHHHHHH-HHHHHTT-
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eC--CCeEEEEEech-Hhhhh-h-HHHHHHHH-HHHHhCC-
Confidence 556778875 6899999999999999999998652 21 23345666431 10110 0 00111221 1111211
Q ss_pred CCcccccccCCCCCCccccccccccccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEEEeC--CCcchHHHHH
Q 020194 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK--DRPKLLFDIV 269 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~f~~~~~~~~~~~~~~~~~~v~i~~~~~~~t~l~v~a~--DrpGLL~~I~ 269 (329)
. ..|.++. +..++.|.+. ..||+..++.
T Consensus 411 ~-----------------------------------------------~~v~~~~---~~a~VsiVG~m~~~~Gvaa~~f 440 (510)
T 2cdq_A 411 I-----------------------------------------------AVVNLLK---GRAIISLIGNVQHSSLILERAF 440 (510)
T ss_dssp T-----------------------------------------------SEEEEEE---EEEEEEEEECGGGHHHHHHHHH
T ss_pred C-----------------------------------------------CeEEEeC---CcEEEEEEEECCCChhHHHHHH
Confidence 0 1223322 4577777776 8899999999
Q ss_pred HHHhcCCeEEEEEEEEecC-CeEEEEEEEEe
Q 020194 270 CTLTDMQYVVFHGMVNTGR-TEAYQEFYIRH 299 (329)
Q Consensus 270 ~~l~~~~i~I~~a~I~T~g-~~~~D~F~v~~ 299 (329)
.+|++.||||... +.| ....=.|.|..
T Consensus 441 ~aL~~~~InI~mI---sqGsSei~Is~vV~~ 468 (510)
T 2cdq_A 441 HVLYTKGVNVQMI---SQGASKVNISFIVNE 468 (510)
T ss_dssp HHHHHHTCCCSEE---EECTTCSEEEEEEEH
T ss_pred HHHHHCCCCEEEE---EecCCcceEEEEEeH
Confidence 9999999999875 334 33444566643
No 69
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=73.24 E-value=6.3 Score=37.59 Aligned_cols=51 Identities=16% Similarity=0.302 Sum_probs=35.9
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeC--CeEEEEEEEEe
Q 020194 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTD 164 (329)
Q Consensus 114 ~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~--~~~~d~f~V~~ 164 (329)
...+-+.+...|+||.++.|+++|.++|++|.+....... +....+.+++.
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 3567788889999999999999999999999876554321 12244555664
No 70
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=68.42 E-value=4.1 Score=38.56 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=40.7
Q ss_pred CCCeEEEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEec-CCeEEEEEEEEeCC
Q 020194 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRHVD 301 (329)
Q Consensus 248 ~~~~t~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~-g~~~~D~F~v~~~~ 301 (329)
....|.|-+..+|+||-|+++...|+.+|||+.+..-.-. +..-+=.||| |.+
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e 84 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD 84 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe
Confidence 3456777777789999999999999999999987775533 3446677888 444
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=62.04 E-value=7 Score=36.95 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=40.1
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeC-CeEEEEEEEEe
Q 020194 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN-DRAAAVVHVTD 164 (329)
Q Consensus 114 ~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~-~~~~d~f~V~~ 164 (329)
...+.|.+..+|+||-|+++.+.|+.+|+|+..-...... +...-.|||.-
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 3567777777999999999999999999998766666554 34567788854
No 72
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=49.03 E-value=45 Score=24.84 Aligned_cols=49 Identities=14% Similarity=0.102 Sum_probs=35.1
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHhcCCeE-EEEEEEEecCCeEEEEEEEEeCCCCCC
Q 020194 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYV-VFHGMVNTGRTEAYQEFYIRHVDGLPI 305 (329)
Q Consensus 250 ~~t~l~v~a~DrpGLL~~I~~~l~~~~i~-I~~a~I~T~g~~~~D~F~v~~~~g~~l 305 (329)
..+.+.+...| +....+.+.+.|+. +...-.....+. - ||+.|++|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~--~-~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGK--K-AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CE--E-EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCcc--E-EEEECCCCCEE
Confidence 45677888888 88888999999999 665433322122 2 99999999865
No 73
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=47.09 E-value=68 Score=23.80 Aligned_cols=49 Identities=18% Similarity=0.106 Sum_probs=36.1
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHhCCce-EEEEEEEecCCEEEEEEEEEcCCCCCC
Q 020194 26 DATVIKVDSVNKHGILLQVIQVLNDVNLV-IKKAYISSDGGWFMDVFNVIDCDGKKI 81 (329)
Q Consensus 26 ~~~~v~v~~~Dr~GL~a~i~~~L~~~gln-I~~A~i~t~~g~~~d~F~V~~~~g~~~ 81 (329)
+++.+.+.+.| +..+...|.+.|+. ++..-.....|.. |++.|++|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 78888899999999 7754333444544 67789999954
No 74
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=40.45 E-value=94 Score=30.00 Aligned_cols=130 Identities=17% Similarity=0.170 Sum_probs=75.8
Q ss_pred eEEEEEEecCCccHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccC----CC
Q 020194 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS----FA 101 (329)
Q Consensus 27 ~~~v~v~~~Dr~GL~a~i~~~L~~~glnI~~A~i~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~----~~ 101 (329)
...+.+.-+||||-|.+++.+|. +-||.+-.=.. ..+.+- +++..+..+. ++..+.|.+.|....- +.
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~-~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~ 410 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNAC-IFVGVRLSRG----LEERKEILQMLNDGGYSVVDLS 410 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCE-EEEEEECSST----HHHHHHHHHHHTSSSCEEETTS
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEE-EEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECC
Confidence 35678889999999999999988 68887654332 222222 2333333331 3456677777765421 11
Q ss_pred CCc--ceeeee----cC--CCCeEEEEEEeCCCccHHHHHHHHHHhCCCcEEEEEEEeeC---CeEEEEEEEEe
Q 020194 102 PSL--RSSVGV----MP--TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN---DRAAAVVHVTD 164 (329)
Q Consensus 102 ~~~--~~~v~~----~~--~~~~~~i~v~~~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~---~~~~d~f~V~~ 164 (329)
... ..++.. .+ -.+-....+.-|.|||-|.+....|.. ++||.--+-..+| |++.--|.|.+
T Consensus 411 ~~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~~~ 483 (514)
T 1tdj_A 411 DDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFELGD 483 (514)
T ss_dssp SCHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC---
T ss_pred CCHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEcCC
Confidence 110 001111 11 123456778899999999999998875 6887655555555 45555565543
No 75
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=32.45 E-value=29 Score=27.54 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=27.8
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHhCCCcEEEE
Q 020194 114 EEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNA 147 (329)
Q Consensus 114 ~~~~~i~v~~---~Dr~Gll~~i~~~l~~~g~~I~~A 147 (329)
.+...|+|.+ ++.||..+++..+|+++|+||..-
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I 52 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMV 52 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCE
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEE
Confidence 3567788874 478999999999999999998643
No 76
>3v69_A Protein filia; RNA-binding, embryogenesis, KH domain, RNA binding, P binding; 2.20A {Mus musculus}
Probab=32.22 E-value=38 Score=26.66 Aligned_cols=37 Identities=11% Similarity=-0.049 Sum_probs=30.3
Q ss_pred ChHHHHHHHhcCCCEEEEEeCCCCCeEEEEEEecCCc
Q 020194 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKH 38 (329)
Q Consensus 2 ~~~~~~~~~~~~~~~V~v~~~~~~~~~~v~v~~~Dr~ 38 (329)
|..|++.+...-...+.++.....+.++|+|+++.+-
T Consensus 74 ~Gs~Ip~IE~~SqTLIqV~~~~s~g~tEVtIfG~~~~ 110 (140)
T 3v69_A 74 DGEHIPHLESMLHTLIHVNVWGPERRAEIWIFGPPPF 110 (140)
T ss_dssp GGTTHHHHHHHHTSEEEEECCCTTSCEEEEEESCHHH
T ss_pred CcCccchHHhhcceeEEEeccCCCCcEEEEEECCHHH
Confidence 5667888887777899999877779999999998543
No 77
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=31.33 E-value=1.1e+02 Score=23.37 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=32.9
Q ss_pred EEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEeCCCCCC
Q 020194 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305 (329)
Q Consensus 253 ~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~~g~~l 305 (329)
.+.+...| +..+.+.|.+.|+.+...-.....+ -.||+.|++|..+
T Consensus 68 hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPdG~~i 113 (144)
T 3r6a_A 68 QATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSDGSVI 113 (144)
T ss_dssp CEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTTSCEE
T ss_pred EEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCCCCEE
Confidence 34445556 6677888999999988765554433 3589999999854
No 78
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=29.04 E-value=50 Score=25.79 Aligned_cols=37 Identities=11% Similarity=0.257 Sum_probs=29.5
Q ss_pred CeEEEEEEeC---CCcchHHHHHHHHhcCCeEEEEEEEEecC
Q 020194 250 DYTVITMRSK---DRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288 (329)
Q Consensus 250 ~~t~l~v~a~---DrpGLL~~I~~~l~~~~i~I~~a~I~T~g 288 (329)
.+-.|+|.++ |-.|+++.|+..|++.||.|... +|+-
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~i--Sty~ 100 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVV--STFD 100 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEE--ECSS
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEE--Eecc
Confidence 5566777655 88999999999999999998764 4553
No 79
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=28.23 E-value=30 Score=32.80 Aligned_cols=104 Identities=17% Similarity=0.230 Sum_probs=61.1
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHhccccCCCC
Q 020194 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (329)
Q Consensus 26 ~~~~v~v~~---~Dr~GL~a~i~~~L~~~glnI~~A~i~t~~g~~~d~F~V~~~~g~~~~~~~~~~~ie~~L~~~~~~~~ 102 (329)
+.+.|+|.+ .+.+|..+++..+|+++|++|.--. +. . .-.+|.|...+...-......+.+...|.....
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss-~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~--- 379 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TS-E-VSVALTLDTTGSTSTGDTLLTQSLLMELSALCR--- 379 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EE-T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHHHSC---
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eC-C-CeEEEEEeccccchhhHHHHHHHHHHHhccCCe---
Confidence 445566665 4678999999999999999987544 21 2 223466644332100001122223333321110
Q ss_pred CcceeeeecCCCCeEEEEEEeC---CCccHHHHHHHHHHhCCCcEE
Q 020194 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVV 145 (329)
Q Consensus 103 ~~~~~v~~~~~~~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~ 145 (329)
+. -..+...|.|.|. ..||+.+++..+|++ +||.
T Consensus 380 -----v~--~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~ 416 (449)
T 2j0w_A 380 -----VE--VEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIR 416 (449)
T ss_dssp -----EE--EEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCC
T ss_pred -----EE--EeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeE
Confidence 11 1235778889987 588999999999966 7765
No 80
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=25.20 E-value=79 Score=23.64 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEeCCCCCC
Q 020194 265 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305 (329)
Q Consensus 265 L~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~~g~~l 305 (329)
+..+.+.|.+.|+.+...-....+.+ .||+.|++|..+
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~~~~g~---~~~~~DPdG~~i 146 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVTRPTGR---GVYFYDPDGFMI 146 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC-CCE---EEEEECTTSCEE
T ss_pred HHHHHHHHHHCCCccccCceecCCcc---EEEEECCCCCEE
Confidence 66677778889999876655443332 889999999864
No 81
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=24.54 E-value=51 Score=25.73 Aligned_cols=45 Identities=18% Similarity=0.238 Sum_probs=32.0
Q ss_pred CeEEEEEEeC---CCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEe
Q 020194 115 EHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (329)
Q Consensus 115 ~~~~i~v~~~---Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~ 164 (329)
.+-.|+|.++ |-.|+++.++..|++.|+.|.- |+| ...|-.+|..
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iSt---y~tD~IlVp~ 108 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VST---FDGDHLLVRS 108 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EEC---SSCEEEEEEG
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EEe---ccccEEEEeH
Confidence 4445666555 7789999999999999999763 344 3346566654
No 82
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=23.66 E-value=97 Score=24.07 Aligned_cols=36 Identities=11% Similarity=-0.009 Sum_probs=28.7
Q ss_pred CeEEEEEEe---CCCcchHHHHHHHHhcCCeEEEEEEEEec
Q 020194 250 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287 (329)
Q Consensus 250 ~~t~l~v~a---~DrpGLL~~I~~~l~~~~i~I~~a~I~T~ 287 (329)
.+-.|+|.+ -|-.|+++.|+..|++.||.|... +||
T Consensus 70 ~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~i--Sty 108 (133)
T 1zvp_A 70 LFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVI--AGY 108 (133)
T ss_dssp CEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEE--ECS
T ss_pred CeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEE--Eec
Confidence 566677665 699999999999999999999764 454
No 83
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=23.04 E-value=99 Score=24.02 Aligned_cols=45 Identities=18% Similarity=0.076 Sum_probs=31.6
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCCcEEEEEEEeeCCeEEEEEEEEe
Q 020194 115 EHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (329)
Q Consensus 115 ~~~~i~v~~---~Dr~Gll~~i~~~l~~~g~~I~~A~i~t~~~~~~d~f~V~~ 164 (329)
.+-.|++.+ -|-.|+++.++..|++.|+.|.- |+| ...|-.+|..
T Consensus 70 ~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iSt---y~tDhIlVp~ 117 (133)
T 1zvp_A 70 LFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IAG---YYHDHIFVQK 117 (133)
T ss_dssp CEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EEC---SSCEEEEEEG
T ss_pred CeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EEe---ccccEEEEeh
Confidence 455555554 58899999999999999999763 333 3346566654
No 84
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=20.77 E-value=1.3e+02 Score=22.00 Aligned_cols=42 Identities=7% Similarity=0.102 Sum_probs=30.5
Q ss_pred hHHHHHHHHhcCCeEEEEEEEEe-cCC-eEEEEEEEEeCCCCCC
Q 020194 264 LLFDIVCTLTDMQYVVFHGMVNT-GRT-EAYQEFYIRHVDGLPI 305 (329)
Q Consensus 264 LL~~I~~~l~~~~i~I~~a~I~T-~g~-~~~D~F~v~~~~g~~l 305 (329)
=+..+.+.|.+.|+.+...-... .|. ...-.||+.|++|..+
T Consensus 80 d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~i 123 (135)
T 3rri_A 80 HFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLL 123 (135)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEE
T ss_pred hHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEE
Confidence 46778888899999987766554 332 2334799999999865
No 85
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=20.18 E-value=2.5e+02 Score=20.14 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=32.4
Q ss_pred EEEEEeCCCcchHHHHHHHHhcCCeEEEEEEEEecCCeEEEEEEEEeCCCCCC
Q 020194 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305 (329)
Q Consensus 253 ~l~v~a~DrpGLL~~I~~~l~~~~i~I~~a~I~T~g~~~~D~F~v~~~~g~~l 305 (329)
-+-+...| +....+.|.+.|+.+...-....+....-.+|+.|++|..+
T Consensus 80 hiaf~v~d----i~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~i 128 (133)
T 3hdp_A 80 HICYEVED----IQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLI 128 (133)
T ss_dssp EEEEEESC----HHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEE
T ss_pred EEEEEcCC----HHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEE
Confidence 44555566 67788889999999876532222222235789999998653
Done!