Query 020196
Match_columns 329
No_of_seqs 248 out of 1149
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 13:15:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dup_A MUTT/nudix family prote 100.0 2.1E-59 7.1E-64 448.1 26.5 228 93-329 3-230 (300)
2 2pny_A Isopentenyl-diphosphate 99.9 1.5E-21 5.1E-26 180.9 14.9 136 187-328 36-188 (246)
3 2dho_A Isopentenyl-diphosphate 99.9 2.5E-21 8.6E-26 178.0 14.9 137 186-328 24-177 (235)
4 1hzt_A Isopentenyl diphosphate 99.7 6.3E-18 2.2E-22 147.6 10.2 134 187-328 2-137 (190)
5 1q27_A Putative nudix hydrolas 99.7 2.6E-17 9E-22 140.4 13.6 131 186-328 4-135 (171)
6 2fkb_A Putative nudix hydrolas 99.7 1.4E-16 4.7E-21 137.0 13.4 129 187-328 8-136 (180)
7 1sjy_A MUTT/nudix family prote 99.4 1.3E-12 4.6E-17 108.9 11.5 105 214-328 10-117 (159)
8 1ktg_A Diadenosine tetraphosph 99.4 8.5E-12 2.9E-16 101.7 12.7 101 218-328 4-105 (138)
9 1nqz_A COA pyrophosphatase (MU 99.3 2.5E-12 8.5E-17 112.2 8.4 105 214-328 32-137 (194)
10 3shd_A Phosphatase NUDJ; nudix 99.3 5.9E-12 2E-16 104.8 8.9 87 232-328 16-102 (153)
11 2pbt_A AP4A hydrolase; nudix p 99.3 1.7E-11 5.8E-16 99.2 11.2 93 222-328 7-99 (134)
12 3grn_A MUTT related protein; s 99.3 3E-11 1E-15 100.9 12.6 81 229-317 17-97 (153)
13 3gwy_A Putative CTP pyrophosph 99.3 1.3E-11 4.5E-16 101.6 9.8 79 231-317 16-95 (140)
14 3i7u_A AP4A hydrolase; nudix p 99.3 2.6E-11 8.8E-16 101.0 10.6 90 225-328 10-99 (134)
15 3r03_A Nudix hydrolase; struct 99.3 3.8E-11 1.3E-15 98.5 11.4 82 229-317 17-98 (144)
16 1rya_A GDP-mannose mannosyl hy 99.3 3.9E-11 1.3E-15 100.1 11.6 94 230-328 28-125 (160)
17 2b0v_A Nudix hydrolase; struct 99.2 1.8E-11 6.2E-16 101.4 7.9 89 232-328 19-107 (153)
18 3hhj_A Mutator MUTT protein; n 99.2 9.1E-11 3.1E-15 98.5 11.7 82 229-317 38-119 (158)
19 3eds_A MUTT/nudix family prote 99.2 1.8E-11 6E-16 102.9 7.3 88 229-328 30-122 (153)
20 1mut_A MUTT, nucleoside tripho 99.2 1.2E-11 4E-16 99.3 5.5 78 231-317 15-92 (129)
21 3oga_A Nucleoside triphosphata 99.2 1.4E-10 4.9E-15 97.9 11.9 64 216-283 26-89 (165)
22 3u53_A BIS(5'-nucleosyl)-tetra 99.2 9E-11 3.1E-15 98.8 10.4 50 229-283 21-70 (155)
23 3exq_A Nudix family hydrolase; 99.2 6.8E-11 2.3E-15 100.3 9.4 81 229-317 20-100 (161)
24 2o1c_A DATP pyrophosphohydrola 99.2 3.1E-10 1E-14 93.0 12.9 88 225-318 15-111 (150)
25 3son_A Hypothetical nudix hydr 99.2 2.6E-10 8.8E-15 94.6 12.4 99 219-327 7-110 (149)
26 2rrk_A ORF135, CTP pyrophospho 99.2 7.2E-11 2.5E-15 96.1 8.8 76 232-316 20-95 (140)
27 4dyw_A MUTT/nudix family prote 99.2 1.4E-10 4.9E-15 97.9 10.1 78 232-317 40-117 (157)
28 3ees_A Probable pyrophosphohyd 99.1 1.7E-10 6E-15 95.0 10.2 77 232-317 33-109 (153)
29 2pqv_A MUTT/nudix family prote 99.1 2.3E-10 8E-15 95.4 11.0 75 232-317 30-104 (154)
30 3i9x_A MUTT/nudix family prote 99.1 1.6E-10 5.3E-15 100.5 9.3 72 218-293 28-108 (187)
31 1vcd_A NDX1; nudix protein, di 99.1 4.5E-10 1.5E-14 90.0 9.4 73 231-317 13-85 (126)
32 3q93_A 7,8-dihydro-8-oxoguanin 99.1 5.7E-10 1.9E-14 96.5 10.2 77 231-315 35-111 (176)
33 2b06_A MUTT/nudix family prote 99.1 2.8E-10 9.6E-15 94.8 7.9 75 232-316 23-97 (155)
34 3e57_A Uncharacterized protein 99.1 8.4E-11 2.9E-15 107.1 4.8 114 203-327 53-174 (211)
35 3f6a_A Hydrolase, nudix family 99.1 6.8E-10 2.3E-14 93.4 9.8 47 232-284 17-63 (159)
36 1v8y_A ADP-ribose pyrophosphat 99.0 3.3E-10 1.1E-14 96.6 7.4 87 232-328 45-131 (170)
37 3fcm_A Hydrolase, nudix family 99.0 1.1E-09 3.8E-14 96.0 11.0 95 226-328 52-154 (197)
38 3h95_A Nucleoside diphosphate- 99.0 7.3E-10 2.5E-14 97.5 9.4 54 225-282 32-85 (199)
39 2yyh_A MUTT domain, 8-OXO-DGTP 99.0 1.2E-09 4E-14 89.6 9.1 76 230-315 21-98 (139)
40 3fk9_A Mutator MUTT protein; s 99.0 1.8E-09 6E-14 94.7 10.4 82 224-316 9-91 (188)
41 2azw_A MUTT/nudix family prote 99.0 1.4E-09 4.9E-14 89.2 9.0 82 226-317 25-108 (148)
42 3gg6_A Nudix motif 18, nucleos 99.0 2.5E-09 8.7E-14 89.2 10.3 87 229-328 29-117 (156)
43 2kdv_A RNA pyrophosphohydrolas 99.0 3.5E-09 1.2E-13 90.5 11.0 79 230-317 18-107 (164)
44 3gz5_A MUTT/nudix family prote 99.0 1.5E-09 5.2E-14 99.3 8.8 91 219-317 24-116 (240)
45 2fb1_A Conserved hypothetical 99.0 1.3E-09 4.5E-14 98.8 8.2 91 219-317 15-105 (226)
46 2jvb_A Protein PSU1, mRNA-deca 99.0 4.1E-09 1.4E-13 86.8 10.5 51 226-282 11-61 (146)
47 3id9_A MUTT/nudix family prote 98.9 4.7E-09 1.6E-13 89.0 11.0 79 224-316 28-106 (171)
48 3o8s_A Nudix hydrolase, ADP-ri 98.9 9.1E-10 3.1E-14 97.8 6.7 104 210-327 61-165 (206)
49 2yvp_A NDX2, MUTT/nudix family 98.9 4.9E-10 1.7E-14 96.4 4.8 90 230-328 51-141 (182)
50 2fml_A MUTT/nudix family prote 98.9 3.3E-09 1.1E-13 98.8 10.7 95 218-318 40-136 (273)
51 3f13_A Putative nudix hydrolas 98.9 2.3E-09 7.8E-14 92.3 8.9 75 233-328 28-102 (163)
52 1vhz_A ADP compounds hydrolase 98.9 1.8E-09 6.1E-14 95.7 7.3 87 233-328 61-147 (198)
53 3q1p_A Phosphohydrolase (MUTT/ 98.9 2.5E-09 8.7E-14 94.9 8.0 97 219-328 68-165 (205)
54 1vk6_A NADH pyrophosphatase; 1 98.9 3.2E-09 1.1E-13 99.4 8.4 83 232-328 151-233 (269)
55 1x51_A A/G-specific adenine DN 98.9 5.8E-09 2E-13 87.3 8.9 78 231-317 33-112 (155)
56 1f3y_A Diadenosine 5',5'''-P1, 98.9 1.5E-09 5.2E-14 90.4 5.0 61 213-281 10-70 (165)
57 3cng_A Nudix hydrolase; struct 98.9 9E-09 3.1E-13 89.8 9.6 74 232-317 51-124 (189)
58 2qjo_A Bifunctional NMN adenyl 98.8 4.1E-09 1.4E-13 98.8 7.7 91 232-328 214-309 (341)
59 2fvv_A Diphosphoinositol polyp 98.8 6.6E-09 2.3E-13 91.9 8.7 57 229-293 51-107 (194)
60 2w4e_A MUTT/nudix family prote 98.8 2.5E-09 8.6E-14 89.1 5.5 74 246-328 30-104 (145)
61 1u20_A U8 snoRNA-binding prote 98.8 6.2E-09 2.1E-13 93.2 8.2 75 230-316 54-131 (212)
62 2qjt_B Nicotinamide-nucleotide 98.8 7.4E-09 2.5E-13 97.8 8.8 94 232-328 219-315 (352)
63 3fjy_A Probable MUTT1 protein; 98.8 6.4E-09 2.2E-13 99.9 6.6 80 229-317 35-123 (364)
64 1g0s_A Hypothetical 23.7 kDa p 98.8 1.6E-08 5.3E-13 90.3 8.5 77 231-315 69-149 (209)
65 1mk1_A ADPR pyrophosphatase; n 98.8 3.5E-09 1.2E-13 94.0 4.0 77 230-315 53-130 (207)
66 2dsc_A ADP-sugar pyrophosphata 98.8 9.4E-09 3.2E-13 91.5 6.8 85 219-314 63-150 (212)
67 1k2e_A Nudix homolog; nudix/MU 98.7 3.1E-08 1.1E-12 83.2 8.8 46 232-283 12-57 (156)
68 3fsp_A A/G-specific adenine gl 98.7 8.3E-08 2.9E-12 93.0 10.5 88 220-317 240-327 (369)
69 2a6t_A SPAC19A8.12; alpha/beta 98.6 6.3E-08 2.1E-12 90.4 8.9 48 231-283 113-160 (271)
70 3q91_A Uridine diphosphate glu 98.6 5.4E-08 1.8E-12 88.4 6.3 76 247-328 94-175 (218)
71 3o6z_A GDP-mannose pyrophospha 98.6 7.5E-08 2.6E-12 84.4 6.9 87 219-316 47-138 (191)
72 2xsq_A U8 snoRNA-decapping enz 98.4 1.4E-07 4.7E-12 85.5 3.8 73 233-316 66-139 (217)
73 3qsj_A Nudix hydrolase; struct 98.3 5.4E-07 1.9E-11 82.8 5.4 49 232-281 24-92 (232)
74 1q33_A Pyrophosphatase, ADP-ri 98.2 1.8E-06 6.2E-11 81.3 7.9 43 232-280 139-181 (292)
75 3kvh_A Protein syndesmos; NUDT 98.1 5.4E-06 1.9E-10 75.2 6.5 99 204-317 7-116 (214)
76 3bho_A Cleavage and polyadenyl 97.7 0.00018 6.2E-09 65.4 9.5 89 220-317 61-163 (208)
77 3rh7_A Hypothetical oxidoreduc 93.5 0.11 3.8E-06 49.6 6.4 74 222-317 186-260 (321)
78 2jzj_A Cyanovirin-N homolog; C 22.7 30 0.001 28.5 1.3 15 1-15 1-15 (124)
No 1
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=100.00 E-value=2.1e-59 Score=448.05 Aligned_cols=228 Identities=39% Similarity=0.699 Sum_probs=216.5
Q ss_pred HHHHHHHHHhcCCCCCCCCeEeEEECCEEEEeecHHHHHHHhcCCCeEEeeCCCCCcccceEEeccCCCCHHHHHHHHHH
Q 020196 93 RGYFEKIKICNRGSEMQSEFFPFIIEDQVAGYTHNRFASHLRKYDDVFIYSGNNGGRFGSHVKLNSKLKTADERTRVVGE 172 (329)
Q Consensus 93 ~~~l~~i~~cN~~~~~~~~~~pf~i~g~~vG~I~p~~~~~L~~~~~~F~~~~~~~~~~~~~V~L~p~~~t~e~Rt~al~~ 172 (329)
|+|+++|++||+| .++.|+||+++|++||||+|.+++.|.+++.+|.++. +.|+|.+.++++++||+++++
T Consensus 3 m~~l~~i~~~~~~--~~~~~~~f~~~g~~~G~i~~~~~~~l~~~~~~~~~~~-------~~v~l~~~~~~~~~rt~~~~~ 73 (300)
T 3dup_A 3 LSFLKHVQDCNTH--DLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTR-------DAVLLSASLRTPQSRTRAVAD 73 (300)
T ss_dssp CCHHHHHHHTTCC--CCTTEEEEEETTEEEEEEEHHHHHHHTTCTTTEEECS-------SEEEECTTCCSHHHHHHHHHH
T ss_pred ccHHHHHHHHcCC--ChhhcEEEEECCEEEEeECHHHHHHHhcCCCceEeeC-------CEEEEecCCCCHHHHHHHHHH
Confidence 5899999999999 5688999999999999999999999999999998865 589999999999999999999
Q ss_pred HHHHHHHcCCCCCccCCeEEeecCCCCceeEEEecccCccCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeec
Q 020196 173 VIKCLAEEELIPDIQNELYPVASTFGSPIFFSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDI 252 (329)
Q Consensus 173 v~~~Lr~~g~l~gWR~El~~V~~~~g~~~l~~iERaa~~lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~ 252 (329)
+++.|+++|+++|||||+|+||+.+|+++++.|||+++++||+.++|||+|+|+.++++.+|||||||++|++|||+|||
T Consensus 74 ~~~~~~~~g~~~gwr~E~~~V~~~~~~~~~~~~eR~~~~~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~ 153 (300)
T 3dup_A 74 VVDRLADEGVVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDN 153 (300)
T ss_dssp HHHHHHHTTSSCCCCSCEEEECSSTTSCCCEEEEGGGTGGGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEE
T ss_pred HHHHHHHcCCCCccccccEEeecCCCCeeeEEEEhhhccccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCcccc
Confidence 99999999999999999999999998899999999999999999999999999987666799999999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEEEeCCCccccCCCCCcCC
Q 020196 253 LAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQGNCIKA 329 (329)
Q Consensus 253 ~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdLeLp~df~P~p~DgEVea 329 (329)
+||||+.+||++++|++||++||+||+.+.++.+.+.|.++|.+..+.|+++|++|+|++++|.++.|+|+|+||++
T Consensus 154 svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~ 230 (300)
T 3dup_A 154 MVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMAD 230 (300)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEE
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhhe
Confidence 99999999999999999999999999998776788999999999888889999999999999999999999999974
No 2
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.87 E-value=1.5e-21 Score=180.91 Aligned_cols=136 Identities=12% Similarity=0.062 Sum_probs=114.0
Q ss_pred cCCeEEeecCCCCceeEEEecccCc-----cCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCC
Q 020196 187 QNELYPVASTFGSPIFFSLDRAAAP-----YFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHG 261 (329)
Q Consensus 187 R~El~~V~~~~g~~~l~~iERaa~~-----lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~G 261 (329)
++|+++|||++| ++++.++|..++ ..|+.+.+|++.++ +.+++||++||+..|.+|||+||+.+|||+.+|
T Consensus 36 ~~E~~~lvd~~~-~~iG~~~r~~~h~~~~~~~g~~h~av~v~v~---~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G 111 (246)
T 2pny_A 36 LEEMLIVVDEND-KVIGADTKRNCHLNENIEKGLLHRAFSVVLF---NTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYN 111 (246)
T ss_dssp TTCEEEEECTTC-CEEEEEEHHHHTBHHHHTTTCCEEEEEEEEE---CTTCCEEEEEECTTCSSSTTCBCCSEEECCBSS
T ss_pred ccceEEEEcCCC-CEEEEEEhHHhccccccCCCcEEEEEEEEEE---eCCCEEEEEEecCCCCCCCCceEeccCceeccC
Confidence 689999999986 688999999988 46888999988544 344589999999999999999999999999999
Q ss_pred ------CCH---HHHHHHHHHhhhCCCCccc--CCceeeeEEEEEEecCCc-eeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 262 ------IAC---GENIIKECEEEAGIPRSIS--NRARPVGAVSYTDINGFS-YKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 262 ------Es~---~ea~iRE~~EEaGL~~~~~--~~~~~~G~IsY~~~~~~g-i~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
|++ ++||+||++||+||+.+.+ .++.++|.+.|......+ ..+|+.|+|.+..+.+ +.|+++||+
T Consensus 112 ~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~--~~~~~~Ev~ 188 (246)
T 2pny_A 112 PAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVT--LNPDPSETK 188 (246)
T ss_dssp HHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCCC--CCCCTTTEE
T ss_pred CcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECCC--CCCChHHee
Confidence 897 9999999999999997632 246889999998876544 4678999999887544 567888885
No 3
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.86 E-value=2.5e-21 Score=178.00 Aligned_cols=137 Identities=13% Similarity=0.108 Sum_probs=114.1
Q ss_pred ccCCeEEeecCCCCceeEEEecccCc-----cCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCC
Q 020196 186 IQNELYPVASTFGSPIFFSLDRAAAP-----YFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPH 260 (329)
Q Consensus 186 WR~El~~V~~~~g~~~l~~iERaa~~-----lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~ 260 (329)
-++|+++|||.+| .+++.++|..++ ..|+.+.+|++.++ +.+++||++||+..|.+|||+||+.+|||+.+
T Consensus 24 ~~~E~~~lvd~~~-~~~G~~~r~~~h~~~~~~~g~~h~av~v~v~---~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~ 99 (235)
T 2dho_A 24 LLAEMCILIDEND-NKIGAETKKNCHLNENIEKGLLHRAFSVFLF---NTENKLLLQQRSDAKITFPGCFTNTCCSHPLS 99 (235)
T ss_dssp SSCCEEEEECTTC-CEEEEEEHHHHTBHHHHTTTCCEEEEEEEEE---CTTCCEEEEEECTTCSSSTTCEESSEEECCBS
T ss_pred hcCcEEEEEcCCC-CEEEEEEhHHhccccccCCCceEEEEEEEEE---cCCCEEEEEEecCcCCCCCCcEEeccCceecC
Confidence 4799999999986 688999999988 56899999988544 34458999999999999999999999999999
Q ss_pred C------CCH---HHHHHHHHHhhhCCCCccc--CCceeeeEEEEEEecCCc-eeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 261 G------IAC---GENIIKECEEEAGIPRSIS--NRARPVGAVSYTDINGFS-YKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 261 G------Es~---~ea~iRE~~EEaGL~~~~~--~~~~~~G~IsY~~~~~~g-i~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
| |++ .+||+||++||+||+.+.+ .++.++|.+.|......+ ..+|+.|+|.+..+.+ +.++++||+
T Consensus 100 Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~--~~~~~~Ev~ 177 (235)
T 2dho_A 100 NPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNVT--LNPDPNEIK 177 (235)
T ss_dssp SHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCCC--CCCCTTTEE
T ss_pred CCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECCC--CcCChHHEE
Confidence 9 884 9999999999999997632 246889999998875544 4678999999887544 567888885
No 4
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.74 E-value=6.3e-18 Score=147.59 Aligned_cols=134 Identities=15% Similarity=0.118 Sum_probs=81.9
Q ss_pred cCCeEEeecCCCCceeEEEecccCc-cCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHH
Q 020196 187 QNELYPVASTFGSPIFFSLDRAAAP-YFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACG 265 (329)
Q Consensus 187 R~El~~V~~~~g~~~l~~iERaa~~-lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ 265 (329)
.+|+++|||.+| .+++.++|..++ ..|..+.+|.+-. . +.+++++++||+..|..+||+|+..+||+++.|||++
T Consensus 2 ~~E~~~v~d~~~-~~~g~~~r~~~~~~~~~~~~~v~~~i--~-~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~ 77 (190)
T 1hzt_A 2 QTEHVILLNAQG-VPTGTLEKYAAHTADTRLHLAFSSWL--F-NAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNE 77 (190)
T ss_dssp ------------------------------CEECEEEEE--E-CTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHH
T ss_pred CceEEEEECCCC-CEeeeEEHhhhcccCCceEEEEEEEE--E-cCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHH
Confidence 469999999986 677889999998 8999888887733 3 3345899999999999999999866999999999999
Q ss_pred HHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCc-eeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 266 ENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFS-YKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 266 ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~g-i~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
+|++||++||+||....+ ...+|.+.|......+ ....+.++|.+.++.. +.++++|+.
T Consensus 78 ~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~E~~ 137 (190)
T 1hzt_A 78 DAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENEVCPVFAARTTSA--LQINDDEVM 137 (190)
T ss_dssp HHHHHHHHHHHCCCBSCC--EEEETTCEEEEECTTSCEEEEECCEEEEEBCSC--CCCCTTTEE
T ss_pred HHHHHHHHHHHCCCchhh--heeeeeEEEEeeCCCCCcceEEEEEEEEecCCC--CcCCcccee
Confidence 999999999999988753 1577777776554322 3467788898888654 445666754
No 5
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.73 E-value=2.6e-17 Score=140.38 Aligned_cols=131 Identities=22% Similarity=0.348 Sum_probs=97.6
Q ss_pred ccCCeEEeecCCCCceeEEEecccCccCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHH
Q 020196 186 IQNELYPVASTFGSPIFFSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACG 265 (329)
Q Consensus 186 WR~El~~V~~~~g~~~l~~iERaa~~lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ 265 (329)
-++|+++|||.+| .+++.++|..++++.-.+.+|.+ ++.+ .++++++.||+..+..+||+|++++||+++.|||+.
T Consensus 4 ~~~E~~~~~d~~~-~~~g~~~r~~~~l~~~~~~~v~v--~i~~-~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~ 79 (171)
T 1q27_A 4 VSDERLDLVNERD-EVVGQILRTDPALRWERVRVVNA--FLRN-SQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYE 79 (171)
T ss_dssp CCSSEEEEESSSS-CEEEEEESSCTTSCTTSCEEEEE--EEEE-TTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHH
T ss_pred ccceeeeeecCCC-CEeceEEhhhhccccccceEEEE--EEEC-CCCeEEEEEecCCCCCCCCccccccCccccCCCCHH
Confidence 3799999999986 67778999998555444445554 3333 334899999999988999999989999999999999
Q ss_pred HHHHHHHHhhhCCCCcccCCceeeeEEE-EEEecCCceeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 266 ENIIKECEEEAGIPRSISNRARPVGAVS-YTDINGFSYKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 266 ea~iRE~~EEaGL~~~~~~~~~~~G~Is-Y~~~~~~gi~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
+|++||++||+||..... .+.+++.+. |.... . .+.++|.+.+... +.++++|+.
T Consensus 80 ~aa~REl~EEtGl~~~~~-~l~~~~~~~~~~~~~---~--~~~~~f~~~~~~~--~~~~~~E~~ 135 (171)
T 1q27_A 80 EAFRREAREELNVEIDAL-SWRPLASFSPFQTTL---S--SFMCVYELRSDAT--PIFNPNDIS 135 (171)
T ss_dssp HHHHHHHHHHHSCTTSSS-CEEEEEEECSSSSCC---S--SEEEEEEEECCCC--CCSCTTTCS
T ss_pred HHHHHHHHHHHCCccccc-ceEEEEEEeccCCCC---c--cEEEEEEEEECCc--cccCchhhh
Confidence 999999999999998763 355666544 32221 1 2678898888433 445566764
No 6
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.70 E-value=1.4e-16 Score=137.00 Aligned_cols=129 Identities=20% Similarity=0.160 Sum_probs=100.9
Q ss_pred cCCeEEeecCCCCceeEEEecccCccCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHH
Q 020196 187 QNELYPVASTFGSPIFFSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGE 266 (329)
Q Consensus 187 R~El~~V~~~~g~~~l~~iERaa~~lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~e 266 (329)
.+|+++|+|.++ .++..++|..++..|+.+.++.+..+ +.++++++++|+..+..+||+|+..+||+++.||++.+
T Consensus 8 ~~E~~~i~d~~~-~~~g~~~r~~~~~~~~~~~~~~v~i~---~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~ 83 (180)
T 2fkb_A 8 STEWVDIVNEEN-EVIAQASREQMRAQCLRHRATYIVVH---DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLE 83 (180)
T ss_dssp CCCEEEEECTTS-CEEEEEEHHHHHHHTCCEEEEEEEEE---CSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHH
T ss_pred CCeeEEEECCCC-CEeeEEEHHHhhccCceeeEEEEEEE---CCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHH
Confidence 689999999986 67889999999999999888877433 33457999999998888999998669999999999999
Q ss_pred HHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 267 NIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 267 a~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
|++||+.||+||.... ...+|.+.+.. + ....+.++|.+..... +.++++|+.
T Consensus 84 aa~REl~EEtGl~~~~---~~~l~~~~~~~--~--~~~~~~~~f~~~~~~~--~~~~~~E~~ 136 (180)
T 2fkb_A 84 SARREAEEELGIAGVP---FAEHGQFYFED--K--NCRVWGALFSCVSHGP--FALQEDEVS 136 (180)
T ss_dssp HHHHHHHHHHCCBSCC---CEEEEEEEEEE--T--TEEEEEEEEEEECCCC--CCCCTTTEE
T ss_pred HHHHHHHHHHCCCccc---eEEEEEEEecC--C--CceEEEEEEEEecCCC--cCCChhHhh
Confidence 9999999999997654 35667665543 2 1345678888875443 445566653
No 7
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.41 E-value=1.3e-12 Score=108.92 Aligned_cols=105 Identities=11% Similarity=0.093 Sum_probs=75.1
Q ss_pred CceeeeEeEEEEEEECCceEEEEEecCCC--CCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeE
Q 020196 214 GIKAYAVPLNGYVEKDGQKFLWIGKRSQV--KSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA 291 (329)
Q Consensus 214 Gi~~~gVHlngyv~~d~~~~lwI~rRS~~--K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~ 291 (329)
.+.+.++.+ ++. +.++++++.||+.. +..++|+|+ ++||+++.||++.+|++||+.||+||.... ...+|.
T Consensus 10 ~~~~~~~~~--vi~-~~~~~vLl~~r~~~~~~~~~~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~l~~ 82 (159)
T 1sjy_A 10 PVELRAAGV--VLL-NERGDILLVQEKGIPGHPEKAGLWH-IPSGAVEDGENPQDAAVREACEETGLRVRP---VKFLGA 82 (159)
T ss_dssp CCCEEEEEE--EEB-CTTCCEEEEEESCC----CCCCCEE-CSEEECCTTSCHHHHHHHHHHHHHSCCEEE---EEEEEE
T ss_pred CeEEEeEEE--EEE-eCCCCEEEEEecccCcCCCCCCeEE-CCccccCCCCCHHHHHHHHHHHHHCcccee---eEEEEE
Confidence 344555554 333 33457899999863 677999996 889999999999999999999999998764 356777
Q ss_pred EEEEEecCCceeeEEEEEEEEEeCCCccccC-CCCCcC
Q 020196 292 VSYTDINGFSYKRDVIFCYDLKLPEDFVPMN-QGNCIK 328 (329)
Q Consensus 292 IsY~~~~~~gi~~Ev~yvYdLeLp~df~P~p-~DgEVe 328 (329)
+.+.+..+ ...+.++|.+.++.+..+.+ .++|+.
T Consensus 83 ~~~~~~~~---~~~~~~~f~~~~~~~~~~~~~~~~E~~ 117 (159)
T 1sjy_A 83 YLGRFPDG---VLILRHVWLAEPEPGQTLAPAFTDEIA 117 (159)
T ss_dssp EEEECTTS---CEEEEEEEEEEECSSCCCCCCCCSSEE
T ss_pred EecccCCC---ceEEEEEEEEEccCCCccccCCCCcee
Confidence 66554332 45778889998876533555 666754
No 8
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.36 E-value=8.5e-12 Score=101.70 Aligned_cols=101 Identities=18% Similarity=0.089 Sum_probs=70.7
Q ss_pred eeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCc-eeeeEEEEEE
Q 020196 218 YAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRA-RPVGAVSYTD 296 (329)
Q Consensus 218 ~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~-~~~G~IsY~~ 296 (329)
.+|.+-.+...+++.++++.||+. .||+|+ ++||+++.||++.+|++||+.||+||..+.+... .+.+.+.|..
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 78 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASY----PPHHWT-PPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEA 78 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESS----TTCCEE-SSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEecCCCcEEEEEEccC----CCCcEe-CCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEe
Confidence 445554554445567899999872 368996 7999999999999999999999999976544322 3556666654
Q ss_pred ecCCceeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 297 INGFSYKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 297 ~~~~gi~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
. + .+...++|.++++.+ .+.+.++|+.
T Consensus 79 ~---~-~~~~~~~f~~~~~~~-~~~~~~~e~~ 105 (138)
T 1ktg_A 79 K---G-KPKSVKYWLAKLNNP-DDVQLSHEHQ 105 (138)
T ss_dssp T---T-EEEEEEEEEEEECSC-CCCCCCTTEE
T ss_pred C---C-CceEEEEEEEEecCC-cccCCCchhc
Confidence 3 1 245677898888764 2344555653
No 9
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.33 E-value=2.5e-12 Score=112.16 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=71.0
Q ss_pred CceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEE
Q 020196 214 GIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS 293 (329)
Q Consensus 214 Gi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~Is 293 (329)
|....++.+- +..+++.++++.||+..+..++|+|+ ++||+++.||++++|++||++||+||..+. ...+|.+.
T Consensus 32 ~~~~~~~~v~--i~~~~~~~vLL~~r~~~~~~~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~ 105 (194)
T 1nqz_A 32 HYRRAAVLVA--LTREADPRVLLTVRSSELPTHKGQIA-FPGGSLDAGETPTQAALREAQEEVALDPAA---VTLLGELD 105 (194)
T ss_dssp -CEEEEEEEE--EESSSSCBBCEEEEC------CCCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCGGG---CEEEEECC
T ss_pred CCceEEEEEE--EecCCCeEEEEEEecCCCCCCCCeEE-CCcccCCCCCCHHHHHHHHHHHHHCCCccc---eEEEEEcc
Confidence 4444444442 22344448999999988788999997 899999999999999999999999998765 35677766
Q ss_pred EEEecCCceeeEEEEEEEEEeCCCcc-ccCCCCCcC
Q 020196 294 YTDINGFSYKRDVIFCYDLKLPEDFV-PMNQGNCIK 328 (329)
Q Consensus 294 Y~~~~~~gi~~Ev~yvYdLeLp~df~-P~p~DgEVe 328 (329)
+..... ...+++|.+.++.+.. +.+.++|+.
T Consensus 106 ~~~~~~----~~~~~~f~~~~~~~~~~~~~~~~E~~ 137 (194)
T 1nqz_A 106 DVFTPV----GFHVTPVLGRIAPEALDTLRVTPEVA 137 (194)
T ss_dssp CEEETT----TEEEEEEEEEECGGGGGGCCCCTTEE
T ss_pred CccCCC----CeEEEEEEEEecCCccccCCCcccee
Confidence 554422 3456788888875544 456667764
No 10
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.30 E-value=5.9e-12 Score=104.79 Aligned_cols=87 Identities=13% Similarity=0.091 Sum_probs=67.7
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||+ ...+|+|. ++||+++.|||+.+|++||++||+||..+.. ..+|...|.+.. ....+.++|.
T Consensus 16 ~~vLl~~r~---~~~~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~---~~~~~~~~f~ 85 (153)
T 3shd_A 16 GKFLVVEET---INGKALWN-QPAGHLEADETLVEAAARELWEETGISAQPQ---HFIRMHQWIAPD---KTPFLRFLFA 85 (153)
T ss_dssp TEEEEEEEE---ETTEEEEE-CSEEECCTTCCHHHHHHHHHHHHHCCCCCCC---EEEEEEEECCTT---SCCEEEEEEE
T ss_pred CEEEEEEec---CCCCCCEE-CCeEEeCCCCCHHHHHHHHHHHHHCcccccC---cEEEEEEEecCC---CceEEEEEEE
Confidence 478888887 34688896 8899999999999999999999999997753 567776665543 2346678899
Q ss_pred EEeCCCccccCCCCCcC
Q 020196 312 LKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 312 LeLp~df~P~p~DgEVe 328 (329)
+.+..+..+.++++|+.
T Consensus 86 ~~~~~~~~~~~~~~E~~ 102 (153)
T 3shd_A 86 IELEQICPTQPHDSDID 102 (153)
T ss_dssp EECSSCCCCCCCSTTCC
T ss_pred EEccccCcCCCCcccce
Confidence 99887654566777764
No 11
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.30 E-value=1.7e-11 Score=99.19 Aligned_cols=93 Identities=20% Similarity=0.199 Sum_probs=69.5
Q ss_pred EEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCc
Q 020196 222 LNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFS 301 (329)
Q Consensus 222 lngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~g 301 (329)
+.+++.++ +++++.||+. |+|. ++||+++.|||+.+|++||++||+||..... .++|.+.|.+...+.
T Consensus 7 ~~~vi~~~--~~vLl~~r~~------~~w~-~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~---~~~~~~~~~~~~~~~ 74 (134)
T 2pbt_A 7 AGGVLFKD--GEVLLIKTPS------NVWS-FPKGNIEPGEKPEETAVREVWEETGVKGEIL---DYIGEIHYWYTLKGE 74 (134)
T ss_dssp EEEEEEET--TEEEEEECTT------SCEE-CCEEECCTTCCHHHHHHHHHHHHHSEEEEEE---EEEEEEEEEEEETTE
T ss_pred EEEEEEEC--CEEEEEEeCC------CcEE-CCccccCCCCCHHHHHHHHHHHHHCCccEEe---eeeeEEEEEeeCCCc
Confidence 34455544 3899999865 8885 8899999999999999999999999987653 678888877765544
Q ss_pred eeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 302 YKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 302 i~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
....+.++|.+.+..+ .+.+++ |+.
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~-e~~ 99 (134)
T 2pbt_A 75 RIFKTVKYYLMKYKEG-EPRPSW-EVK 99 (134)
T ss_dssp EEEEEEEEEEEEEEEE-CCCCCT-TSS
T ss_pred EEEEEEEEEEEEecCC-CcCCCc-cee
Confidence 4456778888887643 344554 553
No 12
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.29 E-value=3e-11 Score=100.91 Aligned_cols=81 Identities=22% Similarity=0.277 Sum_probs=64.4
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
+.++++++.||+..+..++|+|+ ++||+++.||++.+|++||+.||+||..... ..+|.+.+.+.. ...+.+
T Consensus 17 ~~~~~vLL~~r~~~~~~~~g~w~-~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~---~~~~~~~~~~~~----~~~~~~ 88 (153)
T 3grn_A 17 NEKGEFLLLRRSENSRTNAGKWD-LPGGKVNPDESLKEGVAREVWEETGITMVPG---DIAGQVNFELTE----KKVIAI 88 (153)
T ss_dssp CTTCCEEEEEECTTCSSSTTCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCCCCC---SEEEEEEEECSS----CEEEEE
T ss_pred cCCCcEEEEEEcCCCCCCCCeEE-CceeecCCCCCHHHHHHhhhhhhhCcEeecc---eEEEEEEEecCC----ceEEEE
Confidence 34568999999988788999997 8899999999999999999999999988754 466766654432 245677
Q ss_pred EEEEEeCCC
Q 020196 309 CYDLKLPED 317 (329)
Q Consensus 309 vYdLeLp~d 317 (329)
+|.+....+
T Consensus 89 ~~~~~~~~~ 97 (153)
T 3grn_A 89 VFDGGYVVA 97 (153)
T ss_dssp EEEEEECCC
T ss_pred EEEEEecCC
Confidence 888776544
No 13
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.28 E-value=1.3e-11 Score=101.64 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=57.0
Q ss_pred ceEEEEEecCCCCCC-CCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEE
Q 020196 231 QKFLWIGKRSQVKST-YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFC 309 (329)
Q Consensus 231 ~~~lwI~rRS~~K~t-~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yv 309 (329)
++++++.||+..+.+ ++|+|. ++||+++.||++.+|++||++||+||..... ..++.+.|.+.. ....+++
T Consensus 16 ~~~vLL~~r~~~~~~~~~g~w~-lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~---~~~~~~~~~~~~----~~~~~~~ 87 (140)
T 3gwy_A 16 GEKYLCVQRGQTKFSYTSFRYE-FPGGKVEEGESLQEALQREIMEEMDYVIEVG---EKLLTVHHTYPD----FEITMHA 87 (140)
T ss_dssp TTEEEEEEC---------CCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEEEECCCSS----CCEEEEE
T ss_pred CCEEEEEEecCCCCCCCCCeEE-CCCccCCCCCCHHHHHHHHHHHhhCcEEEec---eEEEEEEEEeCC----ceEEEEE
Confidence 357999999877544 899996 8899999999999999999999999987653 466666554432 2456788
Q ss_pred EEEEeCCC
Q 020196 310 YDLKLPED 317 (329)
Q Consensus 310 YdLeLp~d 317 (329)
|.+.++.+
T Consensus 88 f~~~~~~~ 95 (140)
T 3gwy_A 88 FLCHPVGQ 95 (140)
T ss_dssp EEEEECCS
T ss_pred EEEEecCC
Confidence 99988765
No 14
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.26 E-value=2.6e-11 Score=100.97 Aligned_cols=90 Identities=21% Similarity=0.214 Sum_probs=63.9
Q ss_pred EEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceee
Q 020196 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKR 304 (329)
Q Consensus 225 yv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~ 304 (329)
.+.+|+ ++++.||.. |.|. ++||+++.|||+.+||+||++||+||..... .++|.+.|.+...+....
T Consensus 10 vv~~~~--~vLL~~r~~------g~W~-~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~---~~l~~~~~~~~~~~~~~~ 77 (134)
T 3i7u_A 10 VLFKDG--EVLLIKTPS------NVWS-FPKGNIEPGEKPEETAVREVWEETGVKGEIL---DYIGEIHYWYTLKGERIF 77 (134)
T ss_dssp EEEETT--EEEEEECTT------SCEE-CCEEECCTTCCHHHHHHHHHHHHHSEEEEEE---EEEEEEEEEEEETTEEEE
T ss_pred EEEECC--EEEEEEeCC------CcEE-CCeeEecCCCCHHHHHHHHHHHhcCceEEEe---eeeeeeeEEecCCCceEE
Confidence 344443 677777753 6675 7799999999999999999999999987653 578888887655433323
Q ss_pred EEEEEEEEEeCCCccccCCCCCcC
Q 020196 305 DVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 305 Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
.+.+.|.+....+ .|+++ .|+.
T Consensus 78 ~~~~~f~~~~~~~-~~~~~-~E~~ 99 (134)
T 3i7u_A 78 KTVKYYLMKYKEG-EPRPS-WEVK 99 (134)
T ss_dssp EEEEEEEEEEEEE-CCCCC-TTSS
T ss_pred EEEEEEEEEEcCC-cCcCC-hhhe
Confidence 4456687777543 46665 4654
No 15
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.26 E-value=3.8e-11 Score=98.51 Aligned_cols=82 Identities=20% Similarity=0.249 Sum_probs=62.6
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
+.++++++.||+..+ .++|+|+ ++||+++.||++.+|++||+.||+||..... .+..++.+.+.+.. ....++
T Consensus 17 ~~~~~vLl~~r~~~~-~~~g~w~-lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~~~~~~~----~~~~~~ 89 (144)
T 3r03_A 17 DPDGRVLLAQRPPGK-SLAGLWE-FPGGKLEPGETPEAALVRELAEELGVDTRAS-CLAPLAFASHSYDT----FHLLMP 89 (144)
T ss_dssp CTTSCEEEEECCTTS-SSTTCEE-CSEEECCTTCCHHHHHHHHHHHHHCCBCCGG-GCEEEEEEEEECSS----SEEEEE
T ss_pred cCCCEEEEEEeCCCC-CCCCcEE-CCCcEecCCCCHHHHHHHHHHHHhCceeecc-ceEEEEeeeccCCC----eEEEEE
Confidence 444679999998765 4999997 7999999999999999999999999988764 23455555554422 245678
Q ss_pred EEEEEeCCC
Q 020196 309 CYDLKLPED 317 (329)
Q Consensus 309 vYdLeLp~d 317 (329)
+|.+.+..+
T Consensus 90 ~~~~~~~~~ 98 (144)
T 3r03_A 90 LYACRSWRG 98 (144)
T ss_dssp EEEECCCBS
T ss_pred EEEEEecCC
Confidence 888877654
No 16
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.26 E-value=3.9e-11 Score=100.07 Aligned_cols=94 Identities=13% Similarity=0.128 Sum_probs=68.9
Q ss_pred CceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecC-C---ceeeE
Q 020196 230 GQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDING-F---SYKRD 305 (329)
Q Consensus 230 ~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~-~---gi~~E 305 (329)
.++++++.||+.. .++|+|+ ++||+++.||++.+|++||++||+||..+. ....++|.+.+.+... . .....
T Consensus 28 ~~~~vLl~~r~~~--~~~g~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (160)
T 1rya_A 28 SRGEFLLGKRTNR--PAQGYWF-VPGGRVQKDETLEAAFERLTMAELGLRLPI-TAGQFYGVWQHFYDDNFSGTDFTTHY 103 (160)
T ss_dssp TTSCEEEEEECSS--SSTTSEE-CCEEECCTTCCHHHHHHHHHHHHHSSCCCG-GGSEEEEEEEEEESSBTTBSSSCEEE
T ss_pred CCCEEEEEeccCC--CCCCEEE-CCccccCCCCCHHHHHHHHHHHHHCCCCCc-ccceEEEEEeEEEcccccCCCcCcEE
Confidence 3457999999863 3799996 789999999999999999999999998643 2357888888766432 1 12246
Q ss_pred EEEEEEEEeCCCccccCCCCCcC
Q 020196 306 VIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 306 v~yvYdLeLp~df~P~p~DgEVe 328 (329)
+.++|.+.++.+ .+.++++|+.
T Consensus 104 ~~~~f~~~~~~~-~~~~~~~e~~ 125 (160)
T 1rya_A 104 VVLGFRFRVSEE-ELLLPDEQHD 125 (160)
T ss_dssp EEEEEEEECCGG-GCCCCSSSEE
T ss_pred EEEEEEEEcCcc-ccccCCCccc
Confidence 778898888654 3444555653
No 17
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.23 E-value=1.8e-11 Score=101.39 Aligned_cols=89 Identities=13% Similarity=0.020 Sum_probs=65.2
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||+..+. +|+|+ ++||+++.||++.+|++||+.||+||.... ...+|.+.|..... . ...+.++|.
T Consensus 19 ~~vLl~~r~~~~~--~~~w~-lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~-~-~~~~~~~f~ 90 (153)
T 2b0v_A 19 DKYLLVEEIPRGT--AIKLN-QPAGHLEPGESIIQACSREVLEETGHSFLP---EVLTGIYHWTCASN-G-TTYLRFTFS 90 (153)
T ss_dssp TEEEEEEECSSSS--CCEEE-CSEEECCTTSCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEETTT-T-EEEEEEEEE
T ss_pred CEEEEEEEcCCCC--CCeEE-CCCcCcCCCCCHHHHHHHHHHHhhCcEecc---ceEEEEEEEeCCCC-C-cEEEEEEEE
Confidence 4789889987643 89997 789999999999999999999999998764 35677776665432 2 234567788
Q ss_pred EEeCCCccccCCCCCcC
Q 020196 312 LKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 312 LeLp~df~P~p~DgEVe 328 (329)
+++..+..+.+.++|+.
T Consensus 91 ~~~~~~~~~~~~~~e~~ 107 (153)
T 2b0v_A 91 GQVVSFDPDRKLDTGIV 107 (153)
T ss_dssp EEEEEECTTSCCCTTEE
T ss_pred EEeCCCCCCCCCCCCee
Confidence 87765432344566653
No 18
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.21 E-value=9.1e-11 Score=98.47 Aligned_cols=82 Identities=20% Similarity=0.241 Sum_probs=62.5
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
+.++++++.||+..+ .++|+|. ++||+++.||++.+|++||+.||+||..... .+..++.+.+.+.. .....+
T Consensus 38 ~~~~~vLL~~r~~~~-~~~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~----~~~~~~ 110 (158)
T 3hhj_A 38 DQDNRVLLTQRPEGK-SLAGLWE-FPGGKVEQGETPEASLIRELEEELGVHVQAD-NLFPLTFASHGYET----FHLLMP 110 (158)
T ss_dssp CTTSEEEEEECCCTT-SCCCCCB-CCEEECCTTCCHHHHHHHHHHHHHCCBCCGG-GCEEEEEEEEECSS----CEEEEE
T ss_pred eCCCEEEEEEeCCCC-CCCCEEE-CCceeecCCCCHHHHHHHHHHHHhCcEeecc-eEEEEEEEeeccCC----cEEEEE
Confidence 445689999998664 5999997 7999999999999999999999999988764 34456655554432 245677
Q ss_pred EEEEEeCCC
Q 020196 309 CYDLKLPED 317 (329)
Q Consensus 309 vYdLeLp~d 317 (329)
+|.+.+..+
T Consensus 111 ~~~~~~~~~ 119 (158)
T 3hhj_A 111 LYFCSHYKG 119 (158)
T ss_dssp EEEESCCBS
T ss_pred EEEEEECCC
Confidence 788876544
No 19
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.21 E-value=1.8e-11 Score=102.92 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=57.4
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEE-----EEEEecCCcee
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV-----SYTDINGFSYK 303 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~I-----sY~~~~~~gi~ 303 (329)
+.+++++++||+ +|+|. ++||+++.||++.+|++||++||+||..... ..++.+ .|.+..+. ..
T Consensus 30 ~~~~~vLL~~r~------~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~~~~~~-~~ 98 (153)
T 3eds_A 30 NEQGEILFQYPG------GEYWS-LPAGAIELGETPEEAVVREVWEETGLKVQVK---KQKGVFGGKEYRYTYSNGD-EV 98 (153)
T ss_dssp CTTCCEEEECC---------CBB-CSEEECCTTSCHHHHHHHHHHHHHCEEEEEE---EEEEEECSGGGEEECTTSC-EE
T ss_pred cCCCeEEEEEcC------CCcEE-CCccccCCCCCHHHHHHHHHHHHHCccceee---eEEEEecccceeeecCCCC-eE
Confidence 445689999997 78885 8899999999999999999999999987653 355554 34443332 33
Q ss_pred eEEEEEEEEEeCCCccccCCCCCcC
Q 020196 304 RDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 304 ~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
..+.++|.+.+..+ .+.++++|+.
T Consensus 99 ~~~~~~f~~~~~~~-~~~~~~~E~~ 122 (153)
T 3eds_A 99 EYIVVVFECEVTSG-ELRSIDGESL 122 (153)
T ss_dssp EEEEEEEEEEEEEE-CCC-------
T ss_pred EEEEEEEEEEecCC-ccccCCCcEE
Confidence 45678888887644 3455566654
No 20
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.20 E-value=1.2e-11 Score=99.32 Aligned_cols=78 Identities=17% Similarity=0.282 Sum_probs=59.0
Q ss_pred ceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEE
Q 020196 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCY 310 (329)
Q Consensus 231 ~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvY 310 (329)
++++++.||+..+ .++|+|+ ++||+++.||++.+|++||+.||+|+..... ..+|.+.+.+.. ....+++|
T Consensus 15 ~~~vLl~~r~~~~-~~~g~w~-~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~---~~~~~~~~~~~~----~~~~~~~~ 85 (129)
T 1mut_A 15 NNEIFITRRAADA-HMANKLE-FPGGKIEMGETPEQAVVRELQEEVGITPQHF---SLFEKLEYEFPD----RHITLWFW 85 (129)
T ss_dssp TTEEEEEECSSCC-SSSCCEE-CCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE---CCCCCCBCCCSS----CEEECCCE
T ss_pred CCEEEEEEeCCCC-CCCCeEE-CCccCcCCCCCHHHHHHHHHHHHhCCccccc---eEEEEEEEecCC----ceEEEEEE
Confidence 4589999998775 7999998 7999999999999999999999999987653 345554443221 12345678
Q ss_pred EEEeCCC
Q 020196 311 DLKLPED 317 (329)
Q Consensus 311 dLeLp~d 317 (329)
.+.+..+
T Consensus 86 ~~~~~~~ 92 (129)
T 1mut_A 86 LVERWEG 92 (129)
T ss_dssp EEEECSS
T ss_pred EEEccCC
Confidence 7877644
No 21
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.19 E-value=1.4e-10 Score=97.91 Aligned_cols=64 Identities=22% Similarity=0.323 Sum_probs=46.8
Q ss_pred eeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCccc
Q 020196 216 KAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSIS 283 (329)
Q Consensus 216 ~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~ 283 (329)
.+..+.+.... . ++++++.||+..|..+||+|+ ++||+++.||++++|++||++||+||.....
T Consensus 26 ~~~~~~~~ii~-~--~~~vLL~~r~~~~~~~~g~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 89 (165)
T 3oga_A 26 RQRTIVCPLIQ-N--DGCYLLCKMADNRGVFPGQWA-LSGGGVEPGERIEEALRREIREELGEQLILS 89 (165)
T ss_dssp EEEEEEEEEEE-E--TTEEEEEEECC------CCEE-CCCEECCTTCCHHHHHHHHHHHHHCSSCCEE
T ss_pred ceEEEEEEEEe-C--CCEEEEEEecCCCCCCCCeEE-CCccccCCCCCHHHHHHHHHHHHhCCCcccc
Confidence 44555443332 2 358999999988889999997 8899999999999999999999999988753
No 22
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.19 E-value=9e-11 Score=98.76 Aligned_cols=50 Identities=20% Similarity=0.123 Sum_probs=43.1
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCccc
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSIS 283 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~ 283 (329)
+++.++++.||+.. ||.|+ ++||+++.|||+.+||+||++||+||.....
T Consensus 21 n~~~e~LL~~r~~~----~~~W~-lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~ 70 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWT-PPKGHVEPGEDDLETALRETQEEAGIEAGQL 70 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEE-CSEEECCSSCCHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCcEEEEEEecCC----CCCEE-CCeeeccCCCCHHHHHHHHHHHHHCCccccc
Confidence 56778888888753 58896 8999999999999999999999999987653
No 23
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.18 E-value=6.8e-11 Score=100.31 Aligned_cols=81 Identities=17% Similarity=0.223 Sum_probs=62.3
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
++++++++.||+ +..|+|.| .++||+++.||++.+|++||++||+||.... ...++.+.+...... ...+.+
T Consensus 20 ~~~~~vLL~~r~--~~~~~g~w-~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~--~~~~~~ 91 (161)
T 3exq_A 20 PETQRVLVEDKV--NVPWKAGH-SFPGGHVEVGEPCATAAIREVFEETGLRLSG---VTFCGTCEWFDDDRQ--HRKLGL 91 (161)
T ss_dssp TTTCCEEEECCC--CCTTTCSB-BCCCCBCCTTSCHHHHHHHHHHHHHCCEESC---CEEEEEEEEECSSCS--SEEEEE
T ss_pred CCCCEEEEEEcc--CCCCCCCE-EccceecCCCCCHHHHHHHHHHHhhCcEecC---CcEEEEEecccCCCC--eEEEEE
Confidence 333689999998 45689999 6999999999999999999999999998764 357777776653222 245678
Q ss_pred EEEEEeCCC
Q 020196 309 CYDLKLPED 317 (329)
Q Consensus 309 vYdLeLp~d 317 (329)
+|.+....+
T Consensus 92 ~~~~~~~~~ 100 (161)
T 3exq_A 92 LYRASNFTG 100 (161)
T ss_dssp EEEECCEES
T ss_pred EEEEeccCC
Confidence 888776543
No 24
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.18 E-value=3.1e-10 Score=93.01 Aligned_cols=88 Identities=16% Similarity=0.220 Sum_probs=60.7
Q ss_pred EEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeE---EEEEEe----
Q 020196 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA---VSYTDI---- 297 (329)
Q Consensus 225 yv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~---IsY~~~---- 297 (329)
++.+..++++++.||+.. ||+|+ ++||+++.||++.+|++||++||+||..... .+..+|. ..|...
T Consensus 15 ~i~~~~~~~vLl~~r~~~----~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~~ 88 (150)
T 2o1c_A 15 VIYAQDTKRVLMLQRRDD----PDFWQ-SVTGSVEEGETAPQAAMREVKEEVTIDVVAE-QLTLIDCQRTVEFEIFSHLR 88 (150)
T ss_dssp EEEETTTCEEEEEECSSS----TTCEE-SEEEECCTTCCHHHHHHHHHHHHHCCCHHHH-TCCEEEEEEEEEEECCGGGG
T ss_pred EEEeCCCCEEEEEEecCC----CCceE-CCccccCCCCCHHHHHHHHHHHHhCCCcccc-ceeEEeeeceeeeeeecccc
Confidence 444433358888888764 89997 8999999999999999999999999988653 1233333 333111
Q ss_pred --cCCceeeEEEEEEEEEeCCCc
Q 020196 298 --NGFSYKRDVIFCYDLKLPEDF 318 (329)
Q Consensus 298 --~~~gi~~Ev~yvYdLeLp~df 318 (329)
.+.+......++|.+.++.+.
T Consensus 89 ~~~~~~~~~~~~~~f~~~~~~~~ 111 (150)
T 2o1c_A 89 HRYAPGVTRNTESWFCLALPHER 111 (150)
T ss_dssp GGBCTTCCEEEEEEEEEEESSCC
T ss_pred cccCCCCcceEEEEEEEEcCCCC
Confidence 111223466788988887653
No 25
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.17 E-value=2.6e-10 Score=94.61 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=66.9
Q ss_pred eEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEec
Q 020196 219 AVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDIN 298 (329)
Q Consensus 219 gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~ 298 (329)
+|.+..|...++++++++.||+.. |+|. ++||+++.||++.+|++||++||+||..+.. ...+..+ |....
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~~-----g~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~--~~~~~~~-~~~~~ 77 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTDA-----DVWQ-FVAGGGEDEEAISETAKRESIEELNLDVDVK--MYSLDSH-ASIPN 77 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESSS-----SCEE-CEEEECCTTCCHHHHHHHHHHHHHTCCSCCC--EEEEEEE-EEEEG
T ss_pred EEEEEEEEecCCCeEEEEEEEcCC-----CCEe-CCccccCCCCCHHHHHHHHHHHHhCCCcccc--eEEEEee-ecccc
Confidence 566666666567789999999763 9996 8999999999999999999999999988752 1112111 11111
Q ss_pred ---C-CceeeEEEEEEEEEeCCC-ccccCCCCCc
Q 020196 299 ---G-FSYKRDVIFCYDLKLPED-FVPMNQGNCI 327 (329)
Q Consensus 299 ---~-~gi~~Ev~yvYdLeLp~d-f~P~p~DgEV 327 (329)
. .+......++|.+.++.+ ..|.+ ++|+
T Consensus 78 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~E~ 110 (149)
T 3son_A 78 FHFSFNKPYVVPEYCFAIDLTSCSYQVTL-SLEH 110 (149)
T ss_dssp GGTCSSSCSEEEEEEEEEECTTTGGGCCC-CTTE
T ss_pred eeeccCCceEeEEEEEEEEcCCCCCcccC-CCce
Confidence 0 111234567899998843 24444 3554
No 26
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.17 E-value=7.2e-11 Score=96.15 Aligned_cols=76 Identities=14% Similarity=0.206 Sum_probs=59.2
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||+..+ .++|+|+ ++||+++.||++.+|++||+.||+|+..... ..+|.+.+.+.. . ...+++|.
T Consensus 20 ~~vLl~~r~~~~-~~~g~w~-lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~---~~~~~~~~~~~~---~-~~~~~~~~ 90 (140)
T 2rrk_A 20 GKILLAQRPAQS-DQAGLWE-FAGGKVEPDESQRQALVRELREELGIEATVG---EYVASHQREVSG---R-IIHLHAWH 90 (140)
T ss_dssp TEEEEEECCSSC-SCCCCEE-CCEEECCTTSCHHHHHHHHHHHHSCEEEECC---EEEEEEEEEETT---E-EEEEEEEE
T ss_pred CEEEEEEcCCCC-CCCCEEE-CCceecCCCCCHHHHHHHHHHHHHCCeeecc---cEEEEEEEecCC---c-EEEEEEEE
Confidence 479999997664 5899997 8999999999999999999999999987643 567777665432 2 34567787
Q ss_pred EEeCC
Q 020196 312 LKLPE 316 (329)
Q Consensus 312 LeLp~ 316 (329)
+.+..
T Consensus 91 ~~~~~ 95 (140)
T 2rrk_A 91 VPDFH 95 (140)
T ss_dssp ESEEE
T ss_pred EEeeC
Confidence 76543
No 27
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.15 E-value=1.4e-10 Score=97.89 Aligned_cols=78 Identities=21% Similarity=0.141 Sum_probs=60.6
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||+... ++|+|+ ++||+++.||++.+|++||++||+||..... ..++.+.+.+.... ...+.++|.
T Consensus 40 ~~vLL~~r~~~~--~~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~--~~~~~~~f~ 111 (157)
T 4dyw_A 40 GRILLIKRKRAP--EAGCWG-LPGGKVDWLEPVERAVCREIEEELGIALERA---TLLCVVDHIDAANG--EHWVAPVYL 111 (157)
T ss_dssp TEEEEEEECSSS--STTCEE-CCEEECCTTCCHHHHHHHHHHHHHSCEEESC---EEEEEEEEEETTTT--EEEEEEEEE
T ss_pred CEEEEEEecCCC--CCCEEE-CCcccCCCCCCHHHHHHHHHHHHHCcccccC---cEEEEEEeeccCCC--cEEEEEEEE
Confidence 479999998643 899997 8899999999999999999999999987653 56777666554322 345677788
Q ss_pred EEeCCC
Q 020196 312 LKLPED 317 (329)
Q Consensus 312 LeLp~d 317 (329)
+.+..+
T Consensus 112 ~~~~~~ 117 (157)
T 4dyw_A 112 AHAFSG 117 (157)
T ss_dssp ESEEES
T ss_pred EEEcCC
Confidence 776544
No 28
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.15 E-value=1.7e-10 Score=95.01 Aligned_cols=77 Identities=19% Similarity=0.307 Sum_probs=59.8
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||+.. ..++|+|+ ++||+++.||++.+|++||+.||+||..... ..++.+.+.+.. ....+++|.
T Consensus 33 ~~vLl~~r~~~-~~~~g~w~-~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~---~~~~~~~~~~~~----~~~~~~~~~ 103 (153)
T 3ees_A 33 GKILVGQRPEN-NSLAGQWE-FPGGKIENGETPEEALARELNEELGIEAEVG---ELKLACTHSYGD----VGILILFYE 103 (153)
T ss_dssp TEEEEEECCTT-STTTTCEE-CSEEECCTTCCHHHHHHHHHHHHHSCEEECC---CEEEEEEEEETT----EEEEEEEEE
T ss_pred CEEEEEEeCCC-CCCCCeEE-CCceeeCCCCCHHHHHHHHHHHHHCCccccC---ceEEEEEEecCC----CeEEEEEEE
Confidence 58999999876 46999997 7999999999999999999999999987654 366666655432 123467788
Q ss_pred EEeCCC
Q 020196 312 LKLPED 317 (329)
Q Consensus 312 LeLp~d 317 (329)
+.+..+
T Consensus 104 ~~~~~~ 109 (153)
T 3ees_A 104 ILYWKG 109 (153)
T ss_dssp ECEEES
T ss_pred EEECCC
Confidence 877544
No 29
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.15 E-value=2.3e-10 Score=95.36 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=58.5
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.|| +|+|. ++||+++.||++.+|++||++||+||..... ..++.+.+.+...+.....+.++|.
T Consensus 30 ~~vLl~~r-------~~~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~~~~~~~~~~f~ 98 (154)
T 2pqv_A 30 HKLLVTKD-------KGKYY-TIGGAIQVNESTEDAVVREVKEELGVKAQAG---QLAFVVENRFEVDGVSYHNIEFHYL 98 (154)
T ss_dssp TEEEEEEE-------TTEEE-CEEEECBTTCCHHHHHHHHHHHHHCCCEEEE---EEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEec-------CCeEE-CcccCcCCCCCHHHHHHHHHHHHhCCeeeec---eEEEEEeeeecCCCCcceEEEEEEE
Confidence 47899898 68997 7999999999999999999999999987653 4566666555443333346677898
Q ss_pred EEeCCC
Q 020196 312 LKLPED 317 (329)
Q Consensus 312 LeLp~d 317 (329)
+.++.+
T Consensus 99 ~~~~~~ 104 (154)
T 2pqv_A 99 VDLLED 104 (154)
T ss_dssp EEESSC
T ss_pred EEecCC
Confidence 888755
No 30
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.13 E-value=1.6e-10 Score=100.52 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=56.1
Q ss_pred eeEeEEEEEEECC----ceEEEEEecCC-----CCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCcee
Q 020196 218 YAVPLNGYVEKDG----QKFLWIGKRSQ-----VKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARP 288 (329)
Q Consensus 218 ~gVHlngyv~~d~----~~~lwI~rRS~-----~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~ 288 (329)
.+|.+.++..+++ ++++++.||+. .+..++|.|. ++||+++.||++.+||+||++||+||.... ...
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~-lPGG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~ 103 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWA-VPGGFVDENESAEQAAERELEEETSLTDIP---LIP 103 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEE-CSEEECCTTSCHHHHHHHHHHHHHCCCSCC---CEE
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEE-CCceeCCCCCCHHHHHHHHHHHHHCCCCcc---eEE
Confidence 3445544544444 67999999986 5678999996 789999999999999999999999997754 346
Q ss_pred eeEEE
Q 020196 289 VGAVS 293 (329)
Q Consensus 289 ~G~Is 293 (329)
+|.+.
T Consensus 104 l~~~~ 108 (187)
T 3i9x_A 104 FGVFD 108 (187)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 66543
No 31
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.08 E-value=4.5e-10 Score=90.02 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=54.8
Q ss_pred ceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEE
Q 020196 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCY 310 (329)
Q Consensus 231 ~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvY 310 (329)
++++++.||+. |+|+ ++||+++.||++.+|++||+.||+||..... ..+|.+.|... +.. ...++|
T Consensus 13 ~~~vLl~~r~~------g~w~-~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~---~~~~~~~~~~~---~~~-~~~~~~ 78 (126)
T 1vcd_A 13 KREVLLLRDRM------GFWV-FPKGHPEPGESLEEAAVREVWEETGVRAEVL---LPLYPTRYVNP---KGV-EREVHW 78 (126)
T ss_dssp TSCEEEEECTT------SCEE-CCEECCCTTCCHHHHHHHHHHHHHCCEEEEE---EEEEEEEEECT---TSC-EEEEEE
T ss_pred CCEEEEEEECC------CCcc-CCcCcCCCCCCHHHHHHHHHHHhhCcEeeec---cEEeEEEEecC---Cce-EEEEEE
Confidence 34799999874 7886 7899999999999999999999999987653 56777776552 222 335567
Q ss_pred EEEeCCC
Q 020196 311 DLKLPED 317 (329)
Q Consensus 311 dLeLp~d 317 (329)
.+....+
T Consensus 79 ~~~~~~~ 85 (126)
T 1vcd_A 79 FLMRGEG 85 (126)
T ss_dssp EEEEEES
T ss_pred EEEEcCC
Confidence 6665443
No 32
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.07 E-value=5.7e-10 Score=96.55 Aligned_cols=77 Identities=14% Similarity=0.205 Sum_probs=59.9
Q ss_pred ceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEE
Q 020196 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCY 310 (329)
Q Consensus 231 ~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvY 310 (329)
++++++.||.. ..++|+|. ++||+++.||++.+||+||++||+||.... ..++|.+.|.+.... ...+.++|
T Consensus 35 ~~~vLL~~r~~--~~~~g~W~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~~~~~~~~--~~~~~~~f 106 (176)
T 3q93_A 35 PQRVLLGMKKR--GFGAGRWN-GFGGKVQEGETIEDGARRELQEESGLTVDA---LHKVGQIVFEFVGEP--ELMDVHVF 106 (176)
T ss_dssp SSEEEEEEECS--STTTTSEE-CEEEECCTTSCHHHHHHHHHHHHHSCEESC---CEEEEEEEEEETTCS--CEEEEEEE
T ss_pred CCEEEEEEEcC--CCCCCeEE-CceecCCCCCCHHHHHHHHHHHHHCCccee---eEEEEEEEEEcCCCC--cEEEEEEE
Confidence 35888888854 34899995 899999999999999999999999998764 468888887665332 23456778
Q ss_pred EEEeC
Q 020196 311 DLKLP 315 (329)
Q Consensus 311 dLeLp 315 (329)
.+...
T Consensus 107 ~~~~~ 111 (176)
T 3q93_A 107 CTDSI 111 (176)
T ss_dssp EESCE
T ss_pred EEECC
Confidence 77654
No 33
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.06 E-value=2.8e-10 Score=94.78 Aligned_cols=75 Identities=20% Similarity=0.338 Sum_probs=53.6
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
..+++++|+..+ ||| |. ++||+++.||++.+|++||+.||+||..... ..++.+.+.... + ...+.++|.
T Consensus 23 ~~vLl~~r~~~~--~~g-w~-lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~---~~~~~~~~~~~~--~-~~~~~~~~~ 92 (155)
T 2b06_A 23 VVMQYRAPENNR--WSG-YA-FPGGHVENDEAFAESVIREIYEETGLTIQNP---QLVGIKNWPLDT--G-GRYIVICYK 92 (155)
T ss_dssp EEEEEEC-------CCE-EE-CCCCBCCTTSCHHHHHHHHHHHHHSEEEESC---EEEEEEEEECTT--S-CEEEEEEEE
T ss_pred EEEEEEECCCCC--CCC-Ee-ccceecCCCCCHHHHHHHHHHHHhCccccCC---cEEEEEeeccCC--C-ceEEEEEEE
Confidence 349999998765 899 85 8999999999999999999999999987653 466766655421 2 245677787
Q ss_pred EEeCC
Q 020196 312 LKLPE 316 (329)
Q Consensus 312 LeLp~ 316 (329)
+....
T Consensus 93 ~~~~~ 97 (155)
T 2b06_A 93 ATEFS 97 (155)
T ss_dssp ECEEE
T ss_pred EEecC
Confidence 76543
No 34
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.06 E-value=8.4e-11 Score=107.13 Aligned_cols=114 Identities=14% Similarity=0.092 Sum_probs=73.0
Q ss_pred EEEecccCccCCceeeeEeEEEEEEECCceEEEEEecCCCCC--CCCCCeeccccCCCCCCCC--H----HHHHHHHHHh
Q 020196 203 FSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKS--TYPGMLDILAGGGLPHGIA--C----GENIIKECEE 274 (329)
Q Consensus 203 ~~iERaa~~lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~--t~PG~~D~~vaGgi~~GEs--~----~ea~iRE~~E 274 (329)
..++|+.+-.-+.....+++... .++ +++++.||+..+. .++|+|...+||++++||| + ++|++||++|
T Consensus 53 ~~~~Rg~~e~d~~~~q~i~~~II-~~~--grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~E 129 (211)
T 3e57_A 53 FFRERDEAEYDETTKQVIPYVVI-MDG--DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNE 129 (211)
T ss_dssp EEEEHHHHTTCTTEEEEEEEEEE-EET--TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHH
T ss_pred EEEEccccccCCcccceEEEEEE-EEC--CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHH
Confidence 57888888777777777777443 333 4799999987753 4899999889999999999 5 9999999999
Q ss_pred hhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEEEeCCCccccCCCCCc
Q 020196 275 EAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQGNCI 327 (329)
Q Consensus 275 EaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdLeLp~df~P~p~DgEV 327 (329)
|+||... ...++|.+.+.....+.. .+.++|.++... +.+++.|+
T Consensus 130 EtGl~v~---~~~~ig~~~~~~~~~~~~--~l~~~f~~~~~~---g~~~~~E~ 174 (211)
T 3e57_A 130 EVDVSLR---ELEFLGLINSSTTEVSRV--HLGALFLGRGKF---FSVKEKDL 174 (211)
T ss_dssp HEEEEEE---EEEEEEEEECCSSHHHHT--EEEEEEEEEEEE---EEESCTTT
T ss_pred HhCCeee---ccEEEEEEeccCCCCCeE--EEEEEEEEEeCC---ceeCCCCe
Confidence 9999654 356788777532111111 345678887652 34454443
No 35
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.05 E-value=6.8e-10 Score=93.35 Aligned_cols=47 Identities=21% Similarity=0.292 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccC
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISN 284 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~ 284 (329)
+++++.||+. +|+| .++||+++.|||+.+|++||++||+||......
T Consensus 17 ~~vLL~~r~~-----~g~w-~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~ 63 (159)
T 3f6a_A 17 DKVLLHLHKK-----AKKM-LPLGGHIEVNELPEEACIREAKEEAGLNVTLYN 63 (159)
T ss_dssp TEEEEEECSS-----SCCE-ECEEEECCTTCCHHHHHHHHHHHHHCCCCEECC
T ss_pred CEEEEEEcCC-----CCeE-ECCccCccCCCCHHHHHHHHHHHHhCCCceecc
Confidence 4788888863 6899 599999999999999999999999999887653
No 36
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.04 E-value=3.3e-10 Score=96.65 Aligned_cols=87 Identities=8% Similarity=0.029 Sum_probs=55.8
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||... ..++|+|+ ++||+++.|||+++|++||+.||+|+ ... ..++|.+. ... +......++|.
T Consensus 45 ~~vLL~~~~r~-~~~~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl-~~~---~~~l~~~~---~~~-~~~~~~~~~f~ 114 (170)
T 1v8y_A 45 GRMLFVRQMRP-AVGLAPLE-IPAGLIEPGEDPLEAARRELAEQTGL-SGD---LTYLFSYF---VSP-GFTDEKTHVFL 114 (170)
T ss_dssp TEEEEEECCBT-TTTBCCBB-CSEEECCTTCCHHHHHHHHHHHHHSE-EEE---EEEEEEEE---SCT-TTBCCEEEEEE
T ss_pred CEEEEEEEEeC-CCCCCEEE-CCccccCCCCCHHHHHHHHHHHHHCC-CcC---ceeeEEEe---cCC-CccccEEEEEE
Confidence 46877776544 36899996 89999999999999999999999999 543 35666542 222 22345677787
Q ss_pred EEeCCCccccCCCCCcC
Q 020196 312 LKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 312 LeLp~df~P~p~DgEVe 328 (329)
+....+..+.+.++|+.
T Consensus 115 ~~~~~~~~~~~~~~E~~ 131 (170)
T 1v8y_A 115 AENLKEVEAHPDEDEAI 131 (170)
T ss_dssp EEEEEECC--------C
T ss_pred EEeccccCCCCCCCceE
Confidence 77654322344556654
No 37
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.04 E-value=1.1e-09 Score=96.02 Aligned_cols=95 Identities=17% Similarity=0.111 Sum_probs=56.8
Q ss_pred EEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCC-CcccCCceeeeEEEEEEecC----C
Q 020196 226 VEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIP-RSISNRARPVGAVSYTDING----F 300 (329)
Q Consensus 226 v~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~-~~~~~~~~~~G~IsY~~~~~----~ 300 (329)
+.++++.++++.||. .+|.|. ++||+++.|||+.+|++||++||+||. ..+... ....+.|....+ +
T Consensus 52 v~~~~~~~vLL~~r~-----~~g~w~-lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~--~~~~~~~~~~~~~~~~~ 123 (197)
T 3fcm_A 52 AVNKERNKFLMIHHN-----IYNSWA-WTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLD--KAFALDVLTVNGHIKRG 123 (197)
T ss_dssp EECTTSCEEEEEEET-----TTTEEE-CEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCS--SCSEEEEEEECCEEETT
T ss_pred EEECCCCEEEEEEec-----CCCCEE-CCccccCCCCCHHHHHHHHHHHHHCCCcccccCC--CceEEEEeeecCccccC
Confidence 333344588888876 468896 789999999999999999999999998 443211 112233333221 1
Q ss_pred ce---eeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 301 SY---KRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 301 gi---~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
.+ +.-+.++|.+..+.+....++++|+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 154 (197)
T 3fcm_A 124 KYVSSHLHLNLTYLIECSEDETLMLKEDENS 154 (197)
T ss_dssp EEECCEEEEEEEEEEECCTTSCCCCCC----
T ss_pred cccCCceeEEEEEEEEeCCCcccCCCccccc
Confidence 00 11233566677765543455666764
No 38
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.03 E-value=7.3e-10 Score=97.48 Aligned_cols=54 Identities=19% Similarity=0.271 Sum_probs=44.3
Q ss_pred EEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcc
Q 020196 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSI 282 (329)
Q Consensus 225 yv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~ 282 (329)
.+.++.++++++.||.. .++|+|. ++||+++.||++.+||+||++||+||....
T Consensus 32 ~v~~~~~~~vLL~~r~~---~~~g~w~-lPGG~ve~gEs~~~aA~REl~EEtGl~~~~ 85 (199)
T 3h95_A 32 AVFDESTRKILVVQDRN---KLKNMWK-FPGGLSEPEEDIGDTAVREVFEETGIKSEF 85 (199)
T ss_dssp EEEETTTTEEEEEEESS---SSTTSBB-CCEEECCTTCCHHHHHHHHHHHHHCCCEEE
T ss_pred EEEeCCCCEEEEEEEcC---CCCCCEE-CCccccCCCCCHHHHHHHHHHHHhCCcccc
Confidence 44444445888888854 3689996 889999999999999999999999998764
No 39
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.00 E-value=1.2e-09 Score=89.56 Aligned_cols=76 Identities=22% Similarity=0.267 Sum_probs=53.7
Q ss_pred CceE--EEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEE
Q 020196 230 GQKF--LWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVI 307 (329)
Q Consensus 230 ~~~~--lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~ 307 (329)
.+++ +++.||+.. |+.|. ++||+++.|||+.+|++||+.||+||..... ..++.+++..... -...+.
T Consensus 21 ~~~~~~vLl~~r~~~----~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~---~~~~~~~~~~~~~--~~~~~~ 90 (139)
T 2yyh_A 21 GENFKGIVLIERKYP----PVGLA-LPGGFVEVGERVEEAAAREMREETGLEVRLH---KLMGVYSDPERDP--RAHVVS 90 (139)
T ss_dssp TTEEEEEEEEEECSS----SCSEE-CCEEECCTTCCHHHHHHHHHHHHHCCCCEEE---EEEEEECCTTSCT--TSCEEE
T ss_pred CCCcEEEEEEEecCC----CCcEE-CccccCCCCCCHHHHHHHHHHHHHCCCcccc---eEEEEECCCCcCC--CceEEE
Confidence 3455 899898753 56685 8999999999999999999999999987643 3445433211111 124567
Q ss_pred EEEEEEeC
Q 020196 308 FCYDLKLP 315 (329)
Q Consensus 308 yvYdLeLp 315 (329)
++|.+.+.
T Consensus 91 ~~f~~~~~ 98 (139)
T 2yyh_A 91 VVWIGDAQ 98 (139)
T ss_dssp EEEEEEEE
T ss_pred EEEEEecC
Confidence 78888874
No 40
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=98.99 E-value=1.8e-09 Score=94.67 Aligned_cols=82 Identities=18% Similarity=0.170 Sum_probs=61.1
Q ss_pred EEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCce-
Q 020196 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSY- 302 (329)
Q Consensus 224 gyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi- 302 (329)
+++.++ +++++.||. ++|+|. ++||+++.||++.+|++||++||+||.... ...+|.+.+....+...
T Consensus 9 ~vi~~~--~~vLL~~r~-----~~g~W~-lPGG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~~ 77 (188)
T 3fk9_A 9 CIVVDH--DQVLLLQKP-----RRGWWV-APGGKMEAGESILETVKREYWEETGITVKN---PELKGIFSMVIFDEGKIV 77 (188)
T ss_dssp EEEEET--TEEEEEECT-----TTCCEE-CCEEECCTTCCHHHHHHHHHHHHHSCEESS---CEEEEEEEEEEEETTEEE
T ss_pred EEEEEC--CEEEEEEeC-----CCCeEE-CCeecccCCCCHHHHHHHHHHHHHCCCCCC---ceEEEEEEEEecCCCcce
Confidence 344443 478888874 379995 889999999999999999999999998765 35778887776555433
Q ss_pred eeEEEEEEEEEeCC
Q 020196 303 KRDVIFCYDLKLPE 316 (329)
Q Consensus 303 ~~Ev~yvYdLeLp~ 316 (329)
..-+.++|.+....
T Consensus 78 ~~~~~~~f~a~~~~ 91 (188)
T 3fk9_A 78 SEWMLFTFKATEHE 91 (188)
T ss_dssp EEEEEEEEEESCEE
T ss_pred EEEEEEEEEEECCC
Confidence 22367888776543
No 41
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=98.99 E-value=1.4e-09 Score=89.17 Aligned_cols=82 Identities=22% Similarity=0.184 Sum_probs=59.8
Q ss_pred EEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEE-EEEecC-Ccee
Q 020196 226 VEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS-YTDING-FSYK 303 (329)
Q Consensus 226 v~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~Is-Y~~~~~-~gi~ 303 (329)
+.+++++++++.||+ +|+|+ ++||+++.||++.+|++||+.||+||..... ..+|.+. |.+... ....
T Consensus 25 i~~~~~~~vLl~~r~------~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~---~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2azw_A 25 VSKPENNTMVLVQAP------NGAYF-LPGGEIEGTETKEEAIHREVLEELGISVEIG---CYLGEADEYFYSNHRQTAY 94 (148)
T ss_dssp CEEGGGTEEEEEECT------TSCEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEEE---EEEEEEEEEEEETTTTEEE
T ss_pred EECCCCCeEEEEEcC------CCCEe-CCCcccCCCCCHHHHHHHHHHHHhCCeeEee---eEEEEEEEEEcCCCCCcce
Confidence 333435689998984 38896 8999999999999999999999999987653 4666664 333322 2234
Q ss_pred eEEEEEEEEEeCCC
Q 020196 304 RDVIFCYDLKLPED 317 (329)
Q Consensus 304 ~Ev~yvYdLeLp~d 317 (329)
..+.++|.++...+
T Consensus 95 ~~~~~~~~~~~~~~ 108 (148)
T 2azw_A 95 YNPGYFYVANTWRQ 108 (148)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEcCcC
Confidence 56788898887643
No 42
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=98.98 E-value=2.5e-09 Score=89.21 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=60.6
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
+.++++++.||+.. .++|+|+ ++||+++.||++.+|++||++||+||..... ..+|.+. ... ..+.+
T Consensus 29 ~~~~~vLl~~r~~~--~~~~~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~---~~~~~~~----~~~---~~~~~ 95 (156)
T 3gg6_A 29 SEQDEVLLIQEAKR--ECRGSWY-LPAGRMEPGETIVEALQREVKEEAGLHCEPE---TLLSVEE----RGP---SWVRF 95 (156)
T ss_dssp CTTSEEEEEECCCT--TSTTCEE-CSEEECCTTCCHHHHHHHHHHHHHCEEEEEE---EEEEEEE----SST---TEEEE
T ss_pred eCCCEEEEEEecCC--CCCCEEE-CCeeeccCCCCHHHHHHHHHHHhhCceeEee---eEEEEEc----CCC---CEEEE
Confidence 45568999999743 4899997 8899999999999999999999999987653 3444332 221 23456
Q ss_pred EEEEEeCCC-ccc-cCCCCCcC
Q 020196 309 CYDLKLPED-FVP-MNQGNCIK 328 (329)
Q Consensus 309 vYdLeLp~d-f~P-~p~DgEVe 328 (329)
+|.+.+..+ ..+ .+.++|+.
T Consensus 96 ~f~~~~~~~~~~~~~~~~~E~~ 117 (156)
T 3gg6_A 96 VFLARPTGGILKTSKEADAESL 117 (156)
T ss_dssp EEEEEEEEECCCCGGGCSSSCS
T ss_pred EEEEEeeCCeeccCCCCCccee
Confidence 777776432 222 23556654
No 43
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=98.96 E-value=3.5e-09 Score=90.55 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=56.9
Q ss_pred CceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEE----EEEEecC------
Q 020196 230 GQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV----SYTDING------ 299 (329)
Q Consensus 230 ~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~I----sY~~~~~------ 299 (329)
.++++++.+|+. +|+|+ ++||+++.|||+.+|++||+.||+||..... ..+|.+ .|.+...
T Consensus 18 ~~~~vLl~~r~~-----~~~w~-~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 88 (164)
T 2kdv_A 18 RQGQVMWARRFG-----QHSWQ-FPQGGINPGESAEQAMYRELFEEVGLSRKDV---RILASTRNWLRYKLPKRLVRWDT 88 (164)
T ss_dssp TTSEEEEEEETT-----CCCEE-CCEEECCTTCCHHHHHHHHHHHHHCCCGGGE---EEEEECSSCEEEECCTTTCCTTS
T ss_pred cCCEEEEEEEcC-----CCeEE-CCeeecCCCCCHHHHHHHHHHHHHCCCccce---EEEEEecceeEEecCcceeeecc
Confidence 345888888874 78996 7899999999999999999999999988653 456654 3443321
Q ss_pred -CceeeEEEEEEEEEeCCC
Q 020196 300 -FSYKRDVIFCYDLKLPED 317 (329)
Q Consensus 300 -~gi~~Ev~yvYdLeLp~d 317 (329)
........+.|.+++..+
T Consensus 89 ~~~~~~~~~~~f~~~~~~~ 107 (164)
T 2kdv_A 89 KPVCIGQKQKWFLLQLVSG 107 (164)
T ss_dssp SSCCCEEEEEEEEEEESSC
T ss_pred CcccccceeEEEEEEecCC
Confidence 011233566788887654
No 44
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=98.95 E-value=1.5e-09 Score=99.32 Aligned_cols=91 Identities=15% Similarity=0.248 Sum_probs=65.8
Q ss_pred eEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCC--CCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEE
Q 020196 219 AVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPH--GIACGENIIKECEEEAGIPRSISNRARPVGAVSYTD 296 (329)
Q Consensus 219 gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~--GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~ 296 (329)
+|-+.++..++++.++++.||+. ..++|+|. ++||+++. |||+.+|++||++||+||..... ..++++.+..
T Consensus 24 ~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~-lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~---~~l~~~~~~~ 97 (240)
T 3gz5_A 24 TVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWG-LPGGFIDETCDESLEQTVLRKLAEKTAVVPPYI---EQLCTVGNNS 97 (240)
T ss_dssp EEEEEEEEEETTEEEEEEEECCS--SSSTTCEE-CSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEE---EEEEEEEESS
T ss_pred EEEEEEEEEeCCCcEEEEEECcC--CCCCCCEE-CCccccCCCCCcCHHHHHHHHHHHHHCCCCCce---eeEEEeCCCc
Confidence 44444444457778999999984 45899996 89999999 99999999999999999987643 4556555433
Q ss_pred ecCCceeeEEEEEEEEEeCCC
Q 020196 297 INGFSYKRDVIFCYDLKLPED 317 (329)
Q Consensus 297 ~~~~gi~~Ev~yvYdLeLp~d 317 (329)
.++.+ +.+.++|.+.++.+
T Consensus 98 r~~~~--~~~~~~y~a~~~~~ 116 (240)
T 3gz5_A 98 RDARG--WSVTVCYTALMSYQ 116 (240)
T ss_dssp SSTTS--CEEEEEEEEECCHH
T ss_pred cCCCc--eEEEEEEEEEeccc
Confidence 33332 35566777766643
No 45
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=98.95 E-value=1.3e-09 Score=98.79 Aligned_cols=91 Identities=19% Similarity=0.146 Sum_probs=63.7
Q ss_pred eEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEec
Q 020196 219 AVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDIN 298 (329)
Q Consensus 219 gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~ 298 (329)
+|.+.++..+++++++++.||+.. .++|+|. ++||+++.|||+.+|++||++||+||..... ..++++.+...+
T Consensus 15 ~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~-lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~---~~l~~~~~~~r~ 88 (226)
T 2fb1_A 15 GIDCIIFGFNEGEISLLLLKRNFE--PAMGEWS-LMGGFVQKDESVDDAAKRVLAELTGLENVYM---EQVGAFGAIDRD 88 (226)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSS--SSTTCEE-CEEEECCTTSCHHHHHHHHHHHHHCCCSCEE---EEEEEECCTTSS
T ss_pred EEEEEEEEEeCCCCEEEEEECcCC--CCCCCEE-CCeeccCCCCCHHHHHHHHHHHHHCCCCCce---EEEEEeCCCCcC
Confidence 444444443467789999999763 5789995 8999999999999999999999999987643 345544322112
Q ss_pred CCceeeEEEEEEEEEeCCC
Q 020196 299 GFSYKRDVIFCYDLKLPED 317 (329)
Q Consensus 299 ~~gi~~Ev~yvYdLeLp~d 317 (329)
+.+ +.+.++|.+.++.+
T Consensus 89 ~~~--~~v~~~y~a~~~~~ 105 (226)
T 2fb1_A 89 PGE--RVVSIAYYALININ 105 (226)
T ss_dssp SSS--CEEEEEEEEECCTT
T ss_pred CCc--eEEEEEEEEEecCc
Confidence 211 34556787777654
No 46
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=98.95 E-value=4.1e-09 Score=86.83 Aligned_cols=51 Identities=12% Similarity=0.150 Sum_probs=42.3
Q ss_pred EEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcc
Q 020196 226 VEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSI 282 (329)
Q Consensus 226 v~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~ 282 (329)
+.+++++++++.||+. +|+|+ ++||+++.|||+.+|++||+.||+||....
T Consensus 11 i~~~~~~~vLl~~r~~-----~g~w~-~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 61 (146)
T 2jvb_A 11 IFNENLSKILLVQGTE-----SDSWS-FPRGKISKDENDIDCCIREVKEEIGFDLTD 61 (146)
T ss_dssp EBCTTSSEEEEECCSS-----SSCCB-CCEECCCSSSCHHHHHHHHHHHHTSCCCSS
T ss_pred EEeCCCCEEEEEEEcC-----CCcEE-CCcccCCCCCCHHHHHHHHHHHHHCCCchH
Confidence 3333346899988763 58996 799999999999999999999999998764
No 47
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=98.95 E-value=4.7e-09 Score=89.02 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=54.0
Q ss_pred EEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCcee
Q 020196 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYK 303 (329)
Q Consensus 224 gyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~ 303 (329)
+.+.++ +++++.||... +|+|. ++||+++.||++.+|++||++||+||..... ..++.+.+.... .
T Consensus 28 ~ii~~~--~~vLL~~r~~~----~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~----~ 93 (171)
T 3id9_A 28 GILIED--EKVLLVKQKVA----NRDWS-LPGGRVENGETLEEAMIREMREETGLEVKIK---KLLYVCDKPDAS----P 93 (171)
T ss_dssp EEEEET--TEEEEEECSST----TCCEE-CCEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEEEEETTSS----S
T ss_pred EEEEEC--CEEEEEEEECC----CCeEE-CCCccCCCCCCHHHHHHHHHHHHHCCccccc---eEEEEEcccCCC----C
Confidence 344443 47888888763 89995 8899999999999999999999999987643 344443332211 1
Q ss_pred eEEEEEEEEEeCC
Q 020196 304 RDVIFCYDLKLPE 316 (329)
Q Consensus 304 ~Ev~yvYdLeLp~ 316 (329)
....++|.+....
T Consensus 94 ~~~~~~~~~~~~~ 106 (171)
T 3id9_A 94 SLLHITFLLERIE 106 (171)
T ss_dssp CEEEEEEEEEEC-
T ss_pred cEEEEEEEEEEcC
Confidence 2334556666544
No 48
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=98.94 E-value=9.1e-10 Score=97.84 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=65.1
Q ss_pred CccCCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceee
Q 020196 210 APYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPV 289 (329)
Q Consensus 210 ~~lfGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~ 289 (329)
+..-|..+..+.+.+.+.++ +++++.||+ +|.|. ++||+++.||++.+|++||++||+||..... ..+
T Consensus 61 ~~~~~y~~~~~~v~~vv~~~--~~vLLvrr~------~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~l 128 (206)
T 3o8s_A 61 CNETGYQTPKLDTRAAIFQE--DKILLVQEN------DGLWS-LPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQ---RVV 128 (206)
T ss_dssp -------CCEEEEEEEEEET--TEEEEEECT------TSCEE-CSEEECCTTSCHHHHHHHHHHHHHCEEEEEE---EEE
T ss_pred ccccCCCCCCccEEEEEEEC--CEEEEEEec------CCeEE-CCeeccCCCCCHHHHHHHHHHHHHCCcceee---eEE
Confidence 33344455556666677654 489999987 68885 8899999999999999999999999987543 455
Q ss_pred eEEEEEEec-CCceeeEEEEEEEEEeCCCccccCCCCCc
Q 020196 290 GAVSYTDIN-GFSYKRDVIFCYDLKLPEDFVPMNQGNCI 327 (329)
Q Consensus 290 G~IsY~~~~-~~gi~~Ev~yvYdLeLp~df~P~p~DgEV 327 (329)
+.+.+.... +......+.++|.+++..+ .+.++ .|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~E~ 165 (206)
T 3o8s_A 129 AILDKHKNNPAKSAHRVTKVFILCRLLGG-EFQPN-SET 165 (206)
T ss_dssp EEEEHHHHCC-----CEEEEEEEEEEEEE-CCCCC-SSC
T ss_pred EEEeccccCCCCCCceEEEEEEEEEecCC-eecCC-CCc
Confidence 554432111 1112345567788877544 23433 454
No 49
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=98.94 E-value=4.9e-10 Score=96.43 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=62.7
Q ss_pred CceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEE
Q 020196 230 GQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFC 309 (329)
Q Consensus 230 ~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yv 309 (329)
.++++++.||+.. ..++|+|+ ++||+++.||++.+|++||+.||+||.... ..++|.+. ... +......++
T Consensus 51 ~~~~vLL~~r~~~-~~~~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~---~~~-~~~~~~~~~ 121 (182)
T 2yvp_A 51 ERGTALLVRQYRH-PTGKFLLE-VPAGKVDEGETPEAAARRELREEVGAEAET---LIPLPSFH---PQP-SFTAVVFHP 121 (182)
T ss_dssp TTSEEEEEEEEEG-GGTEEEEE-CCEEECCTTCCHHHHHHHHHHHHHCEECSC---EEECCCBC---SCT-TTBCCEEEE
T ss_pred CCCEEEEEEeccC-CCCCcEEE-eccccCCCCcCHHHHHHHHHHHHhCCCccc---EEEEEEEe---CCC-CccccEEEE
Confidence 3457888888754 46899997 899999999999999999999999998754 34555432 122 223456778
Q ss_pred EEEEeCC-CccccCCCCCcC
Q 020196 310 YDLKLPE-DFVPMNQGNCIK 328 (329)
Q Consensus 310 YdLeLp~-df~P~p~DgEVe 328 (329)
|.+.... ...+.+.++|+.
T Consensus 122 f~~~~~~~~~~~~~~~~E~~ 141 (182)
T 2yvp_A 122 FLALKARVVTPPTLEEGELL 141 (182)
T ss_dssp EEECSCEECSCCCCCTTCCE
T ss_pred EEEeccccCCCCCCCCCceE
Confidence 8776432 223445666654
No 50
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=98.94 E-value=3.3e-09 Score=98.82 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=65.4
Q ss_pred eeEeEEEEEEECC--ceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEE
Q 020196 218 YAVPLNGYVEKDG--QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYT 295 (329)
Q Consensus 218 ~gVHlngyv~~d~--~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~ 295 (329)
.+|++.++..+++ +.++++.||+.. .++|+|. ++||+++.||++++|++||++||+||..... .+..++++.+.
T Consensus 40 v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~-lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~-~l~~l~~~~~~ 115 (273)
T 2fml_A 40 LTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWA-LPGGFVNRNESTEDSVLRETKEETGVVISQE-NIEQLHSFSRP 115 (273)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEE-CCEEECCTTSCHHHHHHHHHHHHHCCCCCGG-GEEEEEEECCT
T ss_pred eEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEE-CCccCCCCCcCHHHHHHHHHHHHHCCCCCcC-cEEEEEEEcCC
Confidence 3566655555555 678999999764 5789996 8899999999999999999999999876542 23344433221
Q ss_pred EecCCceeeEEEEEEEEEeCCCc
Q 020196 296 DINGFSYKRDVIFCYDLKLPEDF 318 (329)
Q Consensus 296 ~~~~~gi~~Ev~yvYdLeLp~df 318 (329)
..++. .+.+.++|.+.++.+.
T Consensus 116 ~r~~~--~~~~~~~y~a~~~~~~ 136 (273)
T 2fml_A 116 DRDPR--GWVVTVSYLAFIGEEP 136 (273)
T ss_dssp TSSTT--SSEEEEEEEEECCCCC
T ss_pred CCCCC--ceEEEEEEEEEeCCCC
Confidence 11111 1356677878777553
No 51
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=98.94 E-value=2.3e-09 Score=92.31 Aligned_cols=75 Identities=20% Similarity=0.196 Sum_probs=50.1
Q ss_pred EEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 020196 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDL 312 (329)
Q Consensus 233 ~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdL 312 (329)
++++.||+ +|+|. ++||+++.|||+.+|++||++||+||..... ..++. |.+ .. ...++|.+
T Consensus 28 ~vLL~~r~------~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~l~~--~~~--~~----~~~~~f~~ 89 (163)
T 3f13_A 28 GVLVTASR------GGRYN-LPGGKANRGELRSQALIREIREETGLRINSM---LYLFD--HIT--PF----NAHKVYLC 89 (163)
T ss_dssp EEEEEECC---------BB-CSEEECCTTCCHHHHHHHHHHHHHCCCCCEE---EEEEE--EEC--SS----EEEEEEEE
T ss_pred EEEEEEEC------CCeEE-CCceeCCCCCCHHHHHHHHHHHHHCccccee---EEEEE--Eec--CC----eEEEEEEE
Confidence 56776775 57785 7799999999999999999999999987653 34443 222 21 45677878
Q ss_pred EeCCCccccCCCCCcC
Q 020196 313 KLPEDFVPMNQGNCIK 328 (329)
Q Consensus 313 eLp~df~P~p~DgEVe 328 (329)
.+... |.+++ |++
T Consensus 90 ~~~~~--~~~~~-E~~ 102 (163)
T 3f13_A 90 IAQGQ--PKPQN-EIE 102 (163)
T ss_dssp EC-CC--CCCCT-TCC
T ss_pred EECCc--CccCC-Cce
Confidence 77544 45554 543
No 52
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=98.91 E-value=1.8e-09 Score=95.66 Aligned_cols=87 Identities=16% Similarity=-0.016 Sum_probs=58.9
Q ss_pred EEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 020196 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDL 312 (329)
Q Consensus 233 ~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdL 312 (329)
++++.||... ...+|+|+ ++||+++.||++++||+||++||+|+.... ..++|.+.+ .. +...+.+++|.+
T Consensus 61 ~vLLvrq~r~-~~~~~~we-lPgG~ve~gEs~~~aA~REl~EEtGl~~~~---~~~l~~~~~---~~-~~~~~~~~~f~a 131 (198)
T 1vhz_A 61 HLILIREYAV-GTESYELG-FSKGLIDPGESVYEAANRELKEEVGFGAND---LTFLKKLSM---AP-SYFSSKMNIVVA 131 (198)
T ss_dssp EEEEEEEEET-TTTEEEEE-CEEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEC---CT-TTCCCEEEEEEE
T ss_pred EEEEEEcccC-CCCCcEEE-eCcccCCCCcCHHHHHHHHHHHHHCCCcCc---eEEEEEEeC---CC-CccCcEEEEEEE
Confidence 7777766543 45789997 799999999999999999999999998764 345555432 22 223455677777
Q ss_pred EeCCCccccCCCCCcC
Q 020196 313 KLPEDFVPMNQGNCIK 328 (329)
Q Consensus 313 eLp~df~P~p~DgEVe 328 (329)
....+..+.+.++|+.
T Consensus 132 ~~~~~~~~~~~~~E~~ 147 (198)
T 1vhz_A 132 QDLYPESLEGDEPEPL 147 (198)
T ss_dssp EEEEECCCCCCCSSCC
T ss_pred EeCCcccCCCCCCceE
Confidence 6533222334556653
No 53
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=98.90 E-value=2.5e-09 Score=94.88 Aligned_cols=97 Identities=16% Similarity=0.052 Sum_probs=61.9
Q ss_pred eEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEec
Q 020196 219 AVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDIN 298 (329)
Q Consensus 219 gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~ 298 (329)
.+-+.+.+.++ +++++.||+ .+|.|. ++||+++.|||+.+|++||++||+|+..... ..++...+....
T Consensus 68 ~~~v~~vv~~~--~~vLLv~r~-----~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~---~~l~~~~~~~~~ 136 (205)
T 3q1p_A 68 KVDIRAVVFQN--EKLLFVKEK-----SDGKWA-LPGGWADVGYTPTEVAAKEVFEETGYEVDHF---KLLAIFDKEKHQ 136 (205)
T ss_dssp EEEEEEEEEET--TEEEEEEC--------CCEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEEE---EEEEEEEHHHHS
T ss_pred cceEEEEEEEC--CEEEEEEEc-----CCCcEE-CCcCccCCCCCHHHHHHHHHHHHHCCccccc---eEEEEEeccccC
Confidence 34444455543 478888886 278886 7899999999999999999999999987643 455544432211
Q ss_pred -CCceeeEEEEEEEEEeCCCccccCCCCCcC
Q 020196 299 -GFSYKRDVIFCYDLKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 299 -~~gi~~Ev~yvYdLeLp~df~P~p~DgEVe 328 (329)
+......+.++|.+.+..+ .+.++ .|+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~-~~~~~-~E~~ 165 (205)
T 3q1p_A 137 PSPSATHVYKIFIGCEIIGG-EKKTS-IETE 165 (205)
T ss_dssp CCCCSSCEEEEEEEEEEEEE-CCCCC-TTSC
T ss_pred CCCCCceEEEEEEEEEecCC-ccCCC-Ccce
Confidence 1222345567787777543 23443 4543
No 54
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=98.88 E-value=3.2e-09 Score=99.44 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=61.3
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||+..+ +|+|+ ++||+++.|||+++|++||++||+||.... ..++|...+.+. ..+++.|.
T Consensus 151 ~~vLL~rr~~~~---~g~w~-lPgG~vE~GEt~eeAa~REv~EEtGl~v~~---~~~~~~~~~~~~------~~~~~~f~ 217 (269)
T 1vk6_A 151 DSILLAQHTRHR---NGVHT-VLAGFVEVGETLEQAVAREVMEESGIKVKN---LRYVTSQPWPFP------QSLMTAFM 217 (269)
T ss_dssp TEEEEEEETTTC---SSCCB-CEEEECCTTCCHHHHHHHHHHHHHCCEEEE---EEEEEEEEEETT------EEEEEEEE
T ss_pred CEEEEEEecCCC---CCcEE-CCcCcCCCCCCHHHHHHHHHHHHhCceeee---EEEEEEEecCCC------CEEEEEEE
Confidence 589999997653 79996 799999999999999999999999998764 356676554322 24567787
Q ss_pred EEeCCCccccCCCCCcC
Q 020196 312 LKLPEDFVPMNQGNCIK 328 (329)
Q Consensus 312 LeLp~df~P~p~DgEVe 328 (329)
+++..+ .+.++++|++
T Consensus 218 a~~~~~-~~~~~~~E~~ 233 (269)
T 1vk6_A 218 AEYDSG-DIVIDPKELL 233 (269)
T ss_dssp EEEEEC-CCCCCTTTEE
T ss_pred EEECCC-CcCCCCcceE
Confidence 777543 2345556653
No 55
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=98.87 E-value=5.8e-09 Score=87.26 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=58.3
Q ss_pred ceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHH-HHHHHHHHhhhC-CCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACG-ENIIKECEEEAG-IPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 231 ~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~-ea~iRE~~EEaG-L~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
++++++.||... ..++|+|+ ++||+++.||++. +|++||+.||+| +.... ...+|.+.+.+.. . ...++
T Consensus 33 ~~~vLl~~R~~~-~~~~g~w~-~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~---~~~l~~~~~~~~~---~-~~~~~ 103 (155)
T 1x51_A 33 GAQILLVQRPNS-GLLAGLWE-FPSVTWEPSEQLQRKALLQELQRWAGPLPATH---LRHLGEVVHTFSH---I-KLTYQ 103 (155)
T ss_dssp SEEEEEEECCCC-STTCSCEE-CCEEECCSSHHHHHHHHHHHHHHHSCCCCSTT---CEECCCBCCBCSS---C-EEEEE
T ss_pred CCEEEEEECCCC-CCCCceec-CCccccCCCCCHHHHHHHHHHHHHhCCcceee---eeecceEEEecCC---c-cEEEE
Confidence 478999999764 57999998 8999999999996 999999999999 76643 2456655443322 1 23466
Q ss_pred EEEEEeCCC
Q 020196 309 CYDLKLPED 317 (329)
Q Consensus 309 vYdLeLp~d 317 (329)
+|.+.+..+
T Consensus 104 ~~~~~~~~~ 112 (155)
T 1x51_A 104 VYGLALEGQ 112 (155)
T ss_dssp EEEEECSSC
T ss_pred EEEEEEcCC
Confidence 788877643
No 56
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=98.87 E-value=1.5e-09 Score=90.42 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=48.5
Q ss_pred CCceeeeEeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCc
Q 020196 213 FGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRS 281 (329)
Q Consensus 213 fGi~~~gVHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~ 281 (329)
.|..+.+|.+..+ +.++++++.||+ .+||+|+ ++||+++.|||+++|++||++||+||...
T Consensus 10 ~~~~~~~v~~~i~---~~~~~vLl~~r~----~~~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 70 (165)
T 1f3y_A 10 PEGYRRNVGICLM---NNDKKIFAASRL----DIPDAWQ-MPQGGIDEGEDPRNAAIRELREETGVTSA 70 (165)
T ss_dssp CSSCCCEEEEEEE---CTTSCEEEEEET----TEEEEEE-CCEEECCTTCCHHHHHHHHHHHHHCCCSE
T ss_pred ccceeeeEEEEEE---CCCCcEEEEecC----CCCCcEE-CCeeccCCCCCHHHHHHHHHHHhhCCChh
Confidence 3555666666433 334579999987 2679997 78999999999999999999999999864
No 57
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=98.85 E-value=9e-09 Score=89.78 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=55.5
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
+++++.||...+ .+|+|+ ++||+++.||++++|++||++||+||..... ...+. |.+... ..+.++|.
T Consensus 51 ~~vLL~~r~~~~--~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~--~~~~~~----~~~~~~f~ 118 (189)
T 3cng_A 51 NKVLLCKRAIAP--YRGKWT-LPAGFMENNETLVQGAARETLEEANARVEIR---ELYAV--YSLPHI----SQVYMLFR 118 (189)
T ss_dssp TEEEEEEESSSS--STTCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEE--EEEGGG----TEEEEEEE
T ss_pred CEEEEEEccCCC--CCCeEE-CceeeccCCCCHHHHHHHHHHHHHCCccccc---eeEEE--EecCCC----cEEEEEEE
Confidence 478998997653 489996 8999999999999999999999999987642 23333 222221 35678888
Q ss_pred EEeCCC
Q 020196 312 LKLPED 317 (329)
Q Consensus 312 LeLp~d 317 (329)
+.+..+
T Consensus 119 ~~~~~~ 124 (189)
T 3cng_A 119 AKLLDL 124 (189)
T ss_dssp EEECCS
T ss_pred EEeCCC
Confidence 888654
No 58
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.85 E-value=4.1e-09 Score=98.85 Aligned_cols=91 Identities=18% Similarity=0.294 Sum_probs=57.2
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEE----EEEEecCCceeeEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV----SYTDINGFSYKRDVI 307 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~I----sY~~~~~~gi~~Ev~ 307 (329)
+++++.||+.. .++|+|. ++||+++.||++++|++||+.||+||..... ..+|.+ .|.+.....-.+.+.
T Consensus 214 ~~vLL~~r~~~--~~~g~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T 2qjo_A 214 GHVLMVRRQAK--PGLGLIA-LPGGFIKQNETLVEGMLRELKEETRLKVPLP---VLRGSIVDSHVFDAPGRSLRGRTIT 287 (341)
T ss_dssp TEEEEEECCSS--SSTTCEE-CSEEECCTTSCHHHHHHHHHHHHHCCSSCHH---HHHHTEEEEEEECCTTSCTTSCEEE
T ss_pred CEEEEEEecCC--CCCCeEE-CCCCcCCCCCCHHHHHHHHHhhhhCCccccc---cccccccceEEEeCCCCCCCCcEEE
Confidence 47899999753 3589995 8999999999999999999999999987653 233322 222221111113556
Q ss_pred EEEEEEeCCCcccc-CCCCCcC
Q 020196 308 FCYDLKLPEDFVPM-NQGNCIK 328 (329)
Q Consensus 308 yvYdLeLp~df~P~-p~DgEVe 328 (329)
++|.+.++.+-.|. ..++|+.
T Consensus 288 ~~f~~~~~~~~~~~~~~~~e~~ 309 (341)
T 2qjo_A 288 HAYFIQLPGGELPAVKGGDDAQ 309 (341)
T ss_dssp EEEEEECCSSSCCCCC------
T ss_pred EEEEEEecCCCcCccCCCCcee
Confidence 77777776543333 3445554
No 59
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=98.85 E-value=6.6e-09 Score=91.94 Aligned_cols=57 Identities=23% Similarity=0.353 Sum_probs=47.1
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEE
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS 293 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~Is 293 (329)
++++++++.||+. +||+|+ ++||+++.||++++||+||++||+||..... ..+|.+.
T Consensus 51 ~~~~~vLLv~r~~----~~g~W~-lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~---~~l~~~~ 107 (194)
T 2fvv_A 51 ESEEEVLLVSSSR----HPDRWI-VPGGGMEPEEEPSVAAVREVCEEAGVKGTLG---RLVGIFE 107 (194)
T ss_dssp TTCCEEEEEECSS----CTTSEE-CSEEECCTTCCHHHHHHHHHHHHHCEEEEEE---EEEEEEE
T ss_pred CCCCEEEEEEEeC----CCCcEE-CCCCcCCCCcCHHHHHHHHHHHHhCCccccc---eEEEEEE
Confidence 4567899999864 479997 8999999999999999999999999987643 4566554
No 60
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=98.84 E-value=2.5e-09 Score=89.07 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=44.7
Q ss_pred CCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEEE-eCCCccccCCC
Q 020196 246 YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLK-LPEDFVPMNQG 324 (329)
Q Consensus 246 ~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdLe-Lp~df~P~p~D 324 (329)
.+|+|. ++||+++.|||+++|++||++||+||..... ..+|.+ +...+ ...+..++|.+. +..+ .+.+++
T Consensus 30 ~~~~w~-~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~---~~l~~~---~~~~~-~~~~~~~~f~~~~~~~~-~~~~~~ 100 (145)
T 2w4e_A 30 RATITE-IVAGGVEKGEDLGAAAARELLEEVGGAASEW---VPLPGF---YPQPS-ISGVVFYPLLALGVTLG-AAQLED 100 (145)
T ss_dssp TEEEEE-CEEEECCTTCCHHHHHHHHHHHHHCEECSEE---EECCCB---BSCTT-TCCCEEEEEEEEEEEEC-------
T ss_pred CCCEEE-eCCccCCCCCCHHHHHHHHHHHhhCCccCeE---EEEecC---cCCCC-ccCceEEEEEEEecccC-CCCCCC
Confidence 467886 8999999999999999999999999987542 345542 12222 223456667665 3322 234456
Q ss_pred CCcC
Q 020196 325 NCIK 328 (329)
Q Consensus 325 gEVe 328 (329)
+|+.
T Consensus 101 ~E~~ 104 (145)
T 2w4e_A 101 TETI 104 (145)
T ss_dssp --CE
T ss_pred CCeE
Confidence 6653
No 61
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.84 E-value=6.2e-09 Score=93.22 Aligned_cols=75 Identities=20% Similarity=0.187 Sum_probs=57.0
Q ss_pred CceEEEEEecCCCCCCCCCCeeccccCCCCCCC-CHHHHHHHHHHhhhCCCCcccC--CceeeeEEEEEEecCCceeeEE
Q 020196 230 GQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGI-ACGENIIKECEEEAGIPRSISN--RARPVGAVSYTDINGFSYKRDV 306 (329)
Q Consensus 230 ~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GE-s~~ea~iRE~~EEaGL~~~~~~--~~~~~G~IsY~~~~~~gi~~Ev 306 (329)
.+++++++|| ++|+|. ++||+++.|| ++++|++||++||+||...... ...+++.+.+.+. ...+
T Consensus 54 ~~~~vLl~~r------~~g~w~-~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-----~~~~ 121 (212)
T 1u20_A 54 IRRVLLMMMR------FDGRLG-FPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-----QKCV 121 (212)
T ss_dssp CCEEEEEEEE------TTSCEE-CSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-----SCEE
T ss_pred cCCEEEEEEe------CCCeEE-CCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-----CcEE
Confidence 4568999998 479996 8899999999 9999999999999999887542 1235565554332 2466
Q ss_pred EEEEEEEeCC
Q 020196 307 IFCYDLKLPE 316 (329)
Q Consensus 307 ~yvYdLeLp~ 316 (329)
.++|.+.+..
T Consensus 122 ~~~f~~~~~~ 131 (212)
T 1u20_A 122 THFYIKELKL 131 (212)
T ss_dssp EEEEEEECCH
T ss_pred EEEEEEEecC
Confidence 7888888754
No 62
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.82 E-value=7.4e-09 Score=97.85 Aligned_cols=94 Identities=16% Similarity=0.070 Sum_probs=60.0
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCc-eeeeEEEEEEecCCceeeEEEEEE
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRA-RPVGAVSYTDINGFSYKRDVIFCY 310 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~-~~~G~IsY~~~~~~gi~~Ev~yvY 310 (329)
+++++.||...+ ++|+|. ++||+++.|||+++|++||++||+||......-. ...+...|.+.....-.+.+.++|
T Consensus 219 ~~vLL~~r~~~~--~~g~w~-lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 295 (352)
T 2qjt_B 219 DHILMVQRKAHP--GKDLWA-LPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVG 295 (352)
T ss_dssp TEEEEEEESSSS--STTCEE-CSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSCTTSEEEEEEE
T ss_pred CEEEEEEEcCCC--CCCeEE-CCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCCCCccEEEEEE
Confidence 478888887643 589996 8999999999999999999999999987643111 122333333322211113456667
Q ss_pred EEEeCCCc-cccC-CCCCcC
Q 020196 311 DLKLPEDF-VPMN-QGNCIK 328 (329)
Q Consensus 311 dLeLp~df-~P~p-~DgEVe 328 (329)
.+.++.+- .|.. .++|+.
T Consensus 296 ~~~~~~~~~~~~~~~~~E~~ 315 (352)
T 2qjt_B 296 LFVFDQWPSLPEINAADDAK 315 (352)
T ss_dssp EEEECSCSSCCCCCCCTTEE
T ss_pred EEEEeCCCCCCccCCCccce
Confidence 77776542 2332 345553
No 63
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.77 E-value=6.4e-09 Score=99.91 Aligned_cols=80 Identities=14% Similarity=0.070 Sum_probs=54.0
Q ss_pred CCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCce------
Q 020196 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSY------ 302 (329)
Q Consensus 229 d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi------ 302 (329)
+++.++++.||.. .|.|. ++||+++.|||+++|++||++||+||..... ..++.+.|.+..++..
T Consensus 35 ~~~~~vLLv~r~~-----~g~W~-lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~---~~l~~~~~~~~~~g~~~~~~~~ 105 (364)
T 3fjy_A 35 LDSIEVCIVHRPK-----YDDWS-WPKGKLEQNETHRHAAVREIGEETGSPVKLG---PYLCEVEYPLSEEGKKTRHSHD 105 (364)
T ss_dssp HTTEEEEEEEETT-----TTEEE-CCEEECCTTCCHHHHHHHHHHHHHSCCEEEE---EEEEEEC---------------
T ss_pred CCceEEEEEEcCC-----CCCEE-CCcCCCCCCCCHHHHHHHHHHHHhCCeeeec---cccceEEEeccCCCcccccccc
Confidence 4567888888843 28885 7899999999999999999999999987653 4677777766543211
Q ss_pred ---eeEEEEEEEEEeCCC
Q 020196 303 ---KRDVIFCYDLKLPED 317 (329)
Q Consensus 303 ---~~Ev~yvYdLeLp~d 317 (329)
.....+.|.++...+
T Consensus 106 ~~~~~~~~~~f~~~~~~~ 123 (364)
T 3fjy_A 106 CTADTKHTLYWMAQPISA 123 (364)
T ss_dssp ------CEEEEEEEECCH
T ss_pred cccCceEEEEEEEEecCC
Confidence 134556687777654
No 64
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.77 E-value=1.6e-08 Score=90.28 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=53.8
Q ss_pred ceEEEE--EecCCCCCC--CCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEE
Q 020196 231 QKFLWI--GKRSQVKST--YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDV 306 (329)
Q Consensus 231 ~~~lwI--~rRS~~K~t--~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev 306 (329)
++++++ |.|.+.+.. .+++|. ++||+++.||++++||+||++||+|+.... ..++|.+ +..++ ...+.
T Consensus 69 ~~~vLLvrq~R~~~~~~~~~~~~we-lPgG~ve~gE~~~~aA~REl~EEtGl~~~~---~~~l~~~---~~~~g-~~~~~ 140 (209)
T 1g0s_A 69 RDEVVLIEQIRIAAYDTSETPWLLE-MVAGMIEEGESVEDVARREAIEEAGLIVKR---TKPVLSF---LASPG-GTSER 140 (209)
T ss_dssp TTEEEEEEEECGGGGGGSSCSEEEE-CEEEECCTTCCHHHHHHHHHHHHHCCCCCC---EEEEEEE---ESCTT-TBCCE
T ss_pred CCEEEEEEeecccCCCCCCCCeEEE-eCcccCCCCcCHHHHHHHHHHHHcCcccCc---EEEeEEE---ecCCC-ccCcE
Confidence 345655 456654432 256675 899999999999999999999999998753 4566653 23332 33467
Q ss_pred EEEEEEEeC
Q 020196 307 IFCYDLKLP 315 (329)
Q Consensus 307 ~yvYdLeLp 315 (329)
+++|.+...
T Consensus 141 ~~~f~a~~~ 149 (209)
T 1g0s_A 141 SSIMVGEVD 149 (209)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEc
Confidence 788888763
No 65
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.76 E-value=3.5e-09 Score=93.99 Aligned_cols=77 Identities=13% Similarity=0.044 Sum_probs=55.3
Q ss_pred CceEEEEEecCCCCCCCCCCeeccccCCCC-CCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEE
Q 020196 230 GQKFLWIGKRSQVKSTYPGMLDILAGGGLP-HGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (329)
Q Consensus 230 ~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~-~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~y 308 (329)
.++++++.||.... .++|+|. ++||+++ .||++++|++||+.||+||..... ..++.+ | ... +...+.++
T Consensus 53 ~~~~vLLvrr~r~~-~~~~~w~-lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~---~~l~~~-~--~~~-~~~~~~~~ 123 (207)
T 1mk1_A 53 DNGNIPMVYQYRHT-YGRRLWE-LPAGLLDVAGEPPHLTAARELREEVGLQASTW---QVLVDL-D--TAP-GFSDESVR 123 (207)
T ss_dssp TTSEEEEEEEEETT-TTEEEEE-CCEEECCSTTCCHHHHHHHHHHHHHCEEEEEE---EEEEEE-C--SCT-TTBCCCEE
T ss_pred CCCEEEEEEeecCC-CCCcEEE-eCCccccCCCCCHHHHHHHHHHHHHCCccccc---EEEEEE-E--cCC-CccccEEE
Confidence 44578887776543 5789996 8999999 999999999999999999987643 455544 2 222 22334567
Q ss_pred EEEEEeC
Q 020196 309 CYDLKLP 315 (329)
Q Consensus 309 vYdLeLp 315 (329)
+|.+...
T Consensus 124 ~f~~~~~ 130 (207)
T 1mk1_A 124 VYLATGL 130 (207)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 7777654
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.76 E-value=9.4e-09 Score=91.51 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=55.6
Q ss_pred eEeEEEEEEEC-CceEEEEEe--cCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEE
Q 020196 219 AVPLNGYVEKD-GQKFLWIGK--RSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYT 295 (329)
Q Consensus 219 gVHlngyv~~d-~~~~lwI~r--RS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~ 295 (329)
+|-+.+++.++ ++.++++.| |.+ ..+++|+ ++||+++.||++++||+||++||+|+..... ..++.+
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~~---~~~~~we-lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~---~~l~~~--- 132 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRPP---MGGYCIE-FPAGLIDDGETPEAAALRELEEETGYKGDIA---ECSPAV--- 132 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEGG---GTEEEEE-CCEEECCTTCCHHHHHHHHHHHHHCCCCEEE---EECCCE---
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecCC---CCCcEEE-CCccccCCCCCHHHHHHHHHHHHhCCCccce---EEeccE---
Confidence 56666666542 234566544 433 3567897 8899999999999999999999999987643 333432
Q ss_pred EecCCceeeEEEEEEEEEe
Q 020196 296 DINGFSYKRDVIFCYDLKL 314 (329)
Q Consensus 296 ~~~~~gi~~Ev~yvYdLeL 314 (329)
+... ++..+..++|.+.+
T Consensus 133 ~~~~-~~~~~~~~~~~a~~ 150 (212)
T 2dsc_A 133 CMDP-GLSNCTIHIVTVTI 150 (212)
T ss_dssp ESCT-TTBCCEEEEEEEEE
T ss_pred EcCC-CccCceEEEEEEEE
Confidence 2222 23345566666654
No 67
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=98.73 E-value=3.1e-08 Score=83.21 Aligned_cols=46 Identities=26% Similarity=0.274 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCccc
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSIS 283 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~ 283 (329)
+++++.||+. +|+|. ++||+++.|||+.+|++||+.||+||.....
T Consensus 12 ~~vLL~~r~~-----~g~W~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 57 (156)
T 1k2e_A 12 GKVLLVKHKR-----LGVYI-YPGGHVEHNETPIEAVKREFEEETGIVVEPI 57 (156)
T ss_dssp TEEEEEECTT-----TCSEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEEC
T ss_pred CEEEEEEEcC-----CCcEE-CCeeecCCCCCHHHHHHHHHHHHHCCcceec
Confidence 4788888863 68997 8999999999999999999999999987754
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.66 E-value=8.3e-08 Score=93.02 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=65.6
Q ss_pred EeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecC
Q 020196 220 VPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDING 299 (329)
Q Consensus 220 VHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~ 299 (329)
.+..+.+..|.+++++++||... ..|+|+|+ ++||+++.| +++++++||+.||+||..... ..+|.+.+.+..
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~-g~~~GlWe-fPGG~ve~g-t~~~al~REl~EE~Gl~v~~~---~~l~~~~h~~~h- 312 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDST-GLLANLWE-FPSCETDGA-DGKEKLEQMVGEQYGLQVELT---EPIVSFEHAFSH- 312 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSS-STTTTCEE-CCEEECSSS-CTHHHHHHHHTTSSSCCEEEC---CCCCEEEEECSS-
T ss_pred EEEEEEEEEeCCCEEEEEECCCC-CCcCCccc-CCCcccCCC-CcHHHHHHHHHHHhCCceeee---cccccEEEEcce-
Confidence 34444444455678999999864 56999997 899999999 999999999999999988764 366777766542
Q ss_pred CceeeEEEEEEEEEeCCC
Q 020196 300 FSYKRDVIFCYDLKLPED 317 (329)
Q Consensus 300 ~gi~~Ev~yvYdLeLp~d 317 (329)
. .-.+++|.+++..+
T Consensus 313 --~-~~~~~~~~~~~~~~ 327 (369)
T 3fsp_A 313 --L-VWQLTVFPGRLVHG 327 (369)
T ss_dssp --E-EEEEEEEEEEECCS
T ss_pred --E-EEEEEEEEEEEcCC
Confidence 1 24467788887653
No 69
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=98.65 E-value=6.3e-08 Score=90.44 Aligned_cols=48 Identities=17% Similarity=0.040 Sum_probs=41.7
Q ss_pred ceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCccc
Q 020196 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSIS 283 (329)
Q Consensus 231 ~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~ 283 (329)
++++++.||.. .||+| .++||+++.||++++||+||++||+||....+
T Consensus 113 ~~~vLLv~r~~----~~g~W-~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l 160 (271)
T 2a6t_A 113 MQQCVLVKGWK----ASSGW-GFPKGKIDKDESDVDCAIREVYEETGFDCSSR 160 (271)
T ss_dssp SSEEEEEEESS----TTCCC-BCSEEECCTTCCHHHHHHHHHHHHHCCCCTTT
T ss_pred CCEEEEEEEeC----CCCeE-ECCcccCCCCcCHHHHHHHHHHHHhCCCceee
Confidence 35888888854 37999 58999999999999999999999999988754
No 70
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.58 E-value=5.4e-08 Score=88.35 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=48.8
Q ss_pred CCCeeccccCCCCC-CCCHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEEEEeCCCc-----cc
Q 020196 247 PGMLDILAGGGLPH-GIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDF-----VP 320 (329)
Q Consensus 247 PG~~D~~vaGgi~~-GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdLeLp~df-----~P 320 (329)
+++|+ ++||+++. ||++++||+||++||+|+.... ..+.+++.+.. . .+...+.+++|.+++..+. .+
T Consensus 94 ~~~we-lPgG~ve~~gEs~~eaA~REl~EEtGl~~~~-~~l~~l~~~~~---~-~g~~~~~~~~f~a~~~~~~~~~~~~~ 167 (218)
T 3q91_A 94 GVTVE-LCAGLVDQPGLSLEEVACKEAWEECGYHLAP-SDLRRVATYWS---G-VGLTGSRQTMFYTEVTDAQRSGPGGG 167 (218)
T ss_dssp CEEEE-CEEEECCSSSCCHHHHHHHHHHHHHCBCCCG-GGCEEEEEEEE---C----CCEEEEEEEEEECGGGBCC----
T ss_pred CeEEE-CCcceeCCCCCCHHHHHHHHHHHHhCCcccc-CceEEEEEEec---C-CCccceEEEEEEEEECCcccccCCCC
Confidence 56775 88999999 9999999999999999998843 23466665322 1 1233567788888875321 23
Q ss_pred cCCCCCcC
Q 020196 321 MNQGNCIK 328 (329)
Q Consensus 321 ~p~DgEVe 328 (329)
.+.++|+.
T Consensus 168 ~~d~~E~~ 175 (218)
T 3q91_A 168 LVEEGELI 175 (218)
T ss_dssp -----CCE
T ss_pred CCCCCcEE
Confidence 45566653
No 71
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.58 E-value=7.5e-08 Score=84.43 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=56.2
Q ss_pred eEeEEEEEEECCceEEEEEecCCC----CCC-CCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCCceeeeEEE
Q 020196 219 AVPLNGYVEKDGQKFLWIGKRSQV----KST-YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS 293 (329)
Q Consensus 219 gVHlngyv~~d~~~~lwI~rRS~~----K~t-~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~~~~~G~Is 293 (329)
+|-+-.+. +.++++++.|+... +.. .+|.|. ++||+++ ||++.+||+||++||+|+.... ...+|.+
T Consensus 47 av~v~~~~--~~~~~vlLv~~~r~~~~~~~~~~~~~w~-lPgG~ve-gE~~~~aa~REl~EEtG~~~~~---~~~l~~~- 118 (191)
T 3o6z_A 47 GATILLYN--TKKKTVVLIRQFRVATWVNGNESGQLIE-SCAGLLD-NDEPEVCIRKEAIEETGYEVGE---VRKLFEL- 118 (191)
T ss_dssp EEEEEEEE--TTTTEEEEEEEECHHHHTTTCTTCEEEE-CEEEECC-SSCHHHHHHHHHHHHC-CCCSC---EEEEEEE-
T ss_pred EEEEEEEE--CCCCEEEEEEcCCccccccCCCCCeEEE-ecceEeC-CCCHHHHHHHHHHHHhCCccCc---EEEEEEE-
Confidence 45554443 23346666554321 111 678886 8999999 9999999999999999998753 3566643
Q ss_pred EEEecCCceeeEEEEEEEEEeCC
Q 020196 294 YTDINGFSYKRDVIFCYDLKLPE 316 (329)
Q Consensus 294 Y~~~~~~gi~~Ev~yvYdLeLp~ 316 (329)
+... +...+.+++|.+....
T Consensus 119 --~~~~-~~~~~~~~~f~~~~~~ 138 (191)
T 3o6z_A 119 --YMSP-GGVTELIHFFIAEYSD 138 (191)
T ss_dssp --ESCT-TTBCCEEEEEEEECCT
T ss_pred --EeCC-CccCcEEEEEEEEEcc
Confidence 2222 2345667888888754
No 72
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.39 E-value=1.4e-07 Score=85.46 Aligned_cols=73 Identities=21% Similarity=0.201 Sum_probs=49.0
Q ss_pred EEEEEecCCCCCCCCCCeeccccCCCCCCC-CHHHHHHHHHHhhhCCCCcccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 020196 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGI-ACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (329)
Q Consensus 233 ~lwI~rRS~~K~t~PG~~D~~vaGgi~~GE-s~~ea~iRE~~EEaGL~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYd 311 (329)
.+++++|. +|+|+ ++||+++.|| ++++|++||++||+||..... .+..++.+.. .... ....+.+.|.
T Consensus 66 ~~ll~~r~------~g~w~-lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~-~l~~l~~~~~-~~~~--~~~~~~~~f~ 134 (217)
T 2xsq_A 66 AILMQMRF------DGRLG-FPGGFVDTQDRSLEDGLNRELREELGEAAAAF-RVERTDYRSS-HVGS--GPRVVAHFYA 134 (217)
T ss_dssp EEEEEEET------TSCEE-CSEEECCTTCSSHHHHHHHHHHHHHCGGGGGC-CCCGGGEEEE-EECS--SSSEEEEEEE
T ss_pred cEEEEEcc------CCeEE-CCceecCCCCCCHHHHHHHHHHHHHCCCCccc-eeEEEEEEee-cCCC--CCeEEEEEEE
Confidence 35566663 78996 8899999999 999999999999999988742 1222222211 1111 1245667787
Q ss_pred EEeCC
Q 020196 312 LKLPE 316 (329)
Q Consensus 312 LeLp~ 316 (329)
+.++.
T Consensus 135 ~~l~~ 139 (217)
T 2xsq_A 135 KRLTL 139 (217)
T ss_dssp EECCH
T ss_pred EEecc
Confidence 77764
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.29 E-value=5.4e-07 Score=82.78 Aligned_cols=49 Identities=20% Similarity=0.298 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCC--------------------HHHHHHHHHHhhhCCCCc
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIA--------------------CGENIIKECEEEAGIPRS 281 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs--------------------~~ea~iRE~~EEaGL~~~ 281 (329)
.++++.||+.++..+||+|. ++||++++||+ +..|++||++||+||...
T Consensus 24 ~~vLl~~R~~~~~~~~g~~~-fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 24 IEVLVVRRAKTMRFLPGFVA-FPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLA 92 (232)
T ss_dssp EEEEEEEECTTCSSSTTCEE-CSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCS
T ss_pred eEEEEEEccCCCCCCCCcEE-CCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceec
Confidence 69999999998888899996 89999999997 489999999999999754
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.25 E-value=1.8e-06 Score=81.34 Aligned_cols=43 Identities=23% Similarity=0.164 Sum_probs=38.3
Q ss_pred eEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCC
Q 020196 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPR 280 (329)
Q Consensus 232 ~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~ 280 (329)
.++++.||.. +|+|. ++||+++.||++.+||+||++||+||..
T Consensus 139 l~vLl~~r~~-----~g~W~-lPGG~Ve~GEs~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 139 LQFVAIKRKD-----CGEWA-IPGGMVDPGEKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEEECTT-----TCSEE-CCCEECCTTCCHHHHHHHHHHHHHSCGG
T ss_pred eEEEEEEecC-----CCcEe-CCCcccCCCCCHHHHHHHHHHHHhCCcc
Confidence 5789888865 38996 7999999999999999999999999973
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.05 E-value=5.4e-06 Score=75.24 Aligned_cols=99 Identities=17% Similarity=0.159 Sum_probs=66.6
Q ss_pred EEecccCccCC-ceeeeEeEEEEEEECCc--------eEEEEEecCCCCCCCCCCeeccccCCCCCCC-CHHHHHHHHHH
Q 020196 204 SLDRAAAPYFG-IKAYAVPLNGYVEKDGQ--------KFLWIGKRSQVKSTYPGMLDILAGGGLPHGI-ACGENIIKECE 273 (329)
Q Consensus 204 ~iERaa~~lfG-i~~~gVHlngyv~~d~~--------~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GE-s~~ea~iRE~~ 273 (329)
.|+|+.+-.+| =+....|...|..+++. ..+++|.|-. |+|+ ++||.++.|| |++++++||+.
T Consensus 7 ~i~~~eal~~~~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~------G~we-FPGGkVe~gE~t~e~aL~REl~ 79 (214)
T 3kvh_A 7 QISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFD------GLLG-FPGGFVDRRFWSLEDGLNRVLG 79 (214)
T ss_dssp EECHHHHTTSCTTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETT------SCEE-CSEEEECTTTCCHHHHHHHSCC
T ss_pred ccCHHHHHhhccCccEeeEEEEEcCCccccccccchhheEEEeeeeC------CEEe-CCCccCCCCCCCHHHHHHHHHH
Confidence 46666665564 35667888888765222 2488888854 7776 7799999999 99999999999
Q ss_pred hhhCC-CCcccCCceeeeEEEEEEecCCceeeEEEEEEEEEeCCC
Q 020196 274 EEAGI-PRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPED 317 (329)
Q Consensus 274 EEaGL-~~~~~~~~~~~G~IsY~~~~~~gi~~Ev~yvYdLeLp~d 317 (329)
||+|+ .+. ...+...+.+.+. ..-+++.|.+++..+
T Consensus 80 EElg~~~V~---~~~y~~s~~~~yp-----~~V~LHfY~crl~~G 116 (214)
T 3kvh_A 80 LGLGCLRLT---EADYLSSHLTEGP-----HRVVAHLYARQLTLE 116 (214)
T ss_dssp SCC---CCC---GGGEEEEEEC---------CEEEEEEEEECCHH
T ss_pred HhhCCeeee---eeeeEEEEeccCC-----CEEEEEEEEEEeeCC
Confidence 99997 333 2345555555443 235678898888654
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=97.66 E-value=0.00018 Score=65.38 Aligned_cols=89 Identities=16% Similarity=0.093 Sum_probs=56.3
Q ss_pred EeEEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhhCCCCcccCC---ceeeeEEEEEE
Q 020196 220 VPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNR---ARPVGAVSYTD 296 (329)
Q Consensus 220 VHlngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEaGL~~~~~~~---~~~~G~IsY~~ 296 (329)
|.....+..++..+|++-|+..+ .| .++||.+++||++++|++||+.||+|+....... ...+|. +..
T Consensus 61 V~avil~~~~~~phVLLlq~~~~------~f-~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~--wwR 131 (208)
T 3bho_A 61 VEGVLIVHEHRLPHVLLLQLGTT------FF-KLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN--WWR 131 (208)
T ss_dssp EEEEEEEEETTEEEEEEEEEETT------EE-ECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEE--EEE
T ss_pred EEEEEEEcCCCCcEEEEEEcCCC------cE-ECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEE--Eec
Confidence 34433444445467777777443 44 3679999999999999999999999974322111 134444 332
Q ss_pred ecCC---------ce--eeEEEEEEEEEeCCC
Q 020196 297 INGF---------SY--KRDVIFCYDLKLPED 317 (329)
Q Consensus 297 ~~~~---------gi--~~Ev~yvYdLeLp~d 317 (329)
..-+ .+ -.|+.-+|...||+.
T Consensus 132 p~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~ 163 (208)
T 3bho_A 132 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEK 163 (208)
T ss_dssp CSSSSCCBSSCCTTCCSCSEEEEEEEEECCSS
T ss_pred CCCCCcCCCCCCcccCchhhheeeeeEecCcc
Confidence 2211 11 248999999999985
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=93.50 E-value=0.11 Score=49.56 Aligned_cols=74 Identities=14% Similarity=0.128 Sum_probs=42.9
Q ss_pred EEEEEEECCceEEEEEecCCCCCCCCCCeeccccCCCCCCCCHHHHHHHHHHhhh-CCCCcccCCceeeeEEEEEEecCC
Q 020196 222 LNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEA-GIPRSISNRARPVGAVSYTDINGF 300 (329)
Q Consensus 222 lngyv~~d~~~~lwI~rRS~~K~t~PG~~D~~vaGgi~~GEs~~ea~iRE~~EEa-GL~~~~~~~~~~~G~IsY~~~~~~ 300 (329)
+.+.+..+ ++|++. . ..| | .++||. .|++..++++||++||+ ||.+++. ...+. |.....
T Consensus 186 vgaii~~~--g~vLL~-~------~~G-W-~LPG~~--~~~~~~~~a~RE~~EEttGl~v~~~---~L~~v--~~~~~~- 246 (321)
T 3rh7_A 186 LGAVLEQQ--GAVFLA-G------NET-L-SLPNCT--VEGGDPARTLAAYLEQLTGLNVTIG---FLYSV--YEDKSD- 246 (321)
T ss_dssp EEEEEESS--SCEEEB-C------SSE-E-BCCEEE--ESSSCHHHHHHHHHHHHHSSCEEEE---EEEEE--EECTTT-
T ss_pred EEEEEEEC--CEEEEe-e------CCC-c-cCCccc--CCCChhHHHHHHHHHHhcCCEEeec---eEEEE--EEcCCC-
Confidence 55555433 467776 1 135 5 355554 46666679999999998 9999863 22222 222221
Q ss_pred ceeeEEEEEEEEEeCCC
Q 020196 301 SYKRDVIFCYDLKLPED 317 (329)
Q Consensus 301 gi~~Ev~yvYdLeLp~d 317 (329)
..+..+|.+++..+
T Consensus 247 ---~~~~i~f~~~~~~g 260 (321)
T 3rh7_A 247 ---GRQNIVYHALASDG 260 (321)
T ss_dssp ---CCEEEEEEEEECSS
T ss_pred ---ceEEEEEEEEeCCC
Confidence 22345688887543
No 78
>2jzj_A Cyanovirin-N homolog; CVNH, antiviral protein, carbohydrate binding protein; NMR {Ceratopteris richardii}
Probab=22.72 E-value=30 Score=28.52 Aligned_cols=15 Identities=33% Similarity=0.638 Sum_probs=13.9
Q ss_pred Ccccccccceeeecc
Q 020196 1 MACNFHHLTQTIRLS 15 (329)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (329)
|||+||.-|+-|++.
T Consensus 1 ~a~~Fs~Sc~dI~l~ 15 (124)
T 2jzj_A 1 MQCNFANSCTGVELY 15 (124)
T ss_dssp CCCCGGGSEEEEEEE
T ss_pred CCCchhhhcCCcEEE
Confidence 899999999999985
Done!