BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020199
MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAG
KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAE
WLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGL
DPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDY
GHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQIL
KDPSFAPIKLDSVEYIDASSMLTTTHVKV

High Scoring Gene Products

Symbol, full name Information P value
CLH1
chlorophyllase 1
protein from Arabidopsis thaliana 4.9e-53
CLH2
chlorophyllase 2
protein from Arabidopsis thaliana 2.0e-49

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020199
        (329 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013129 - symbol:CLH1 "chlorophyllase 1" speci...   549  4.9e-53   1
TAIR|locus:2170852 - symbol:CLH2 "chlorophyllase 2" speci...   515  2.0e-49   1


>TAIR|locus:2013129 [details] [associations]
            symbol:CLH1 "chlorophyllase 1" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0047746
            "chlorophyllase activity" evidence=IEA;IDA] [GO:0015996
            "chlorophyll catabolic process" evidence=IDA] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0042742 "defense response to bacterium"
            evidence=IMP] [GO:0050832 "defense response to fungus"
            evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0009617 "response to bacterium" evidence=RCA] [GO:0009862
            "systemic acquired resistance, salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
            signaling pathway" evidence=RCA] [GO:0010310 "regulation of
            hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
            InterPro:IPR010821 InterPro:IPR017395 Pfam:PF07224
            PIRSF:PIRSF038128 UniPathway:UPA00674 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005773 GO:GO:0006950 EMBL:AC007797
            EMBL:AF021244 EMBL:AY099815 EMBL:BT000309 IPI:IPI00547500
            PIR:E86329 RefSeq:NP_564094.1 UniGene:At.19779
            ProteinModelPortal:O22527 SMR:O22527 STRING:O22527 PaxDb:O22527
            PRIDE:O22527 EnsemblPlants:AT1G19670.1 GeneID:838554
            KEGG:ath:AT1G19670 GeneFarm:1723 TAIR:At1g19670 eggNOG:NOG238435
            HOGENOM:HOG000005711 InParanoid:O22527 KO:K08099 OMA:INWASEN
            PhylomeDB:O22527 ProtClustDB:PLN00021
            BioCyc:MetaCyc:AT1G19670-MONOMER BRENDA:3.1.1.14
            Genevestigator:O22527 GermOnline:AT1G19670 GO:GO:0047746
            GO:GO:0015996 Uniprot:O22527
        Length = 324

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 127/324 (39%), Positives = 178/324 (54%)

Query:    11 ASVQGTPLLATATLPV-FTRGIYSTKRITLETXXXXXXXXXXXLIIVTPAGKGTFNVILF 69
             A+++ +P  ++   P  F  G   T  I ++            + I  P   GT+ V+LF
Sbjct:     2 AAIEDSPTFSSVVTPAAFEIGSLPTTEIPVDPVENDSTAPPKPVRITCPTVAGTYPVVLF 61

Query:    70 LHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQN 129
              HG  L N  YS + +HIASHG+I+VAPQL   +PP     E++ A  V  W  + L+ +
Sbjct:    62 FHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQV-EVDDAGSVINWASENLKAH 120

Query:   130 LPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSK--TTG 179
             LP +  AN    +++GHSRGG+TAFA++L +         F A+IG+DPVAGT+K   T 
Sbjct:   121 LPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAGTNKYIRTD 180

Query:   180 XXXXXXXXXXXXXXXXVTVIGTGLGGV-ARCITACAPEGANHEEFFNRCKNSSRAHFVAT 238
                             V V+GTGLG      +  CAP   NHEEF+  CK +++AHFVA 
Sbjct:   181 PHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAA 239

Query:   239 DYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQ 298
             DYGHMD+LDD+      + ++   CKNG   +  MR  V GIVVAFLK   +G+  + R 
Sbjct:   240 DYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKKSEMRSFVGGIVVAFLKYSLWGEKAEIRL 298

Query:   299 ILKDPSFAPIKLD-SVEYIDASSM 321
             I+KDPS +P KLD S E  +AS +
Sbjct:   299 IVKDPSVSPAKLDPSPELEEASGI 322


>TAIR|locus:2170852 [details] [associations]
            symbol:CLH2 "chlorophyllase 2" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=ISM;ISS] [GO:0015996
            "chlorophyll catabolic process" evidence=IEA;IDA] [GO:0043231
            "intracellular membrane-bounded organelle" evidence=IEA]
            [GO:0047746 "chlorophyllase activity" evidence=IEA;IDA]
            InterPro:IPR010821 InterPro:IPR017395 Pfam:PF07224
            PIRSF:PIRSF038128 UniPathway:UPA00674 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0031969 GO:GO:0016023
            EMBL:AB026651 HOGENOM:HOG000005711 KO:K08099 ProtClustDB:PLN00021
            BRENDA:3.1.1.14 GO:GO:0047746 GO:GO:0015996 EMBL:AF134302
            EMBL:BT002898 IPI:IPI00545422 RefSeq:NP_199199.1 UniGene:At.9045
            ProteinModelPortal:Q9M7I7 SMR:Q9M7I7 STRING:Q9M7I7 PaxDb:Q9M7I7
            PRIDE:Q9M7I7 EnsemblPlants:AT5G43860.1 GeneID:834408
            KEGG:ath:AT5G43860 GeneFarm:1727 TAIR:At5g43860 eggNOG:NOG238272
            InParanoid:Q9M7I7 OMA:PLFPPCA PhylomeDB:Q9M7I7
            BioCyc:ARA:AT5G43860-MONOMER BioCyc:MetaCyc:AT5G43860-MONOMER
            Genevestigator:Q9M7I7 GermOnline:AT5G43860 Uniprot:Q9M7I7
        Length = 318

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 116/278 (41%), Positives = 161/278 (57%)

Query:    53 LIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNEL 112
             L++ TP  +G + V++ LHG  L N  YS++  H++SHGFI++APQLY SI  P   +E+
Sbjct:    45 LLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLY-SIAGPDTMDEI 103

Query:   113 NSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLR-YGFGA------V 165
              S AE+ +WL  GL   LP     N+S  A+ GHSRGG+TAFA++L+ +G+ +      +
Sbjct:   104 KSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSNLKISTL 163

Query:   166 IGLDPVAGTSK---TTGXXXXXXXXXXXXXXXXVTVIGTGLGGVAR--CITACAPEGANH 220
             IG+DPV GT K   T                  + VIG+GLG  AR      CAP G NH
Sbjct:   164 IGIDPVDGTGKGKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNH 223

Query:   221 EEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGI 280
              EFF  C+  +  HFVA DYGH+D+LDD+   ++  + S   CKNG E R PMRR V G+
Sbjct:   224 REFFRECQGPAW-HFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGEERR-PMRRFVGGL 280

Query:   281 VVAFLKDFFYGDAEDFRQILKDPSF--APIKLDSVEYI 316
             VV+FLK +  GD  +  +I KD      P+++   E I
Sbjct:   281 VVSFLKAYLEGDDRELVKI-KDGCHEDVPVEIQEFEVI 317


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      329       302   0.00097  115 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  206 KB (2116 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.11u 0.09s 22.20t   Elapsed:  00:00:01
  Total cpu time:  22.11u 0.09s 22.20t   Elapsed:  00:00:01
  Start:  Sat May 11 07:01:51 2013   End:  Sat May 11 07:01:52 2013

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