Query 020199
Match_columns 329
No_of_seqs 218 out of 3097
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 07:50:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020199.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020199hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF07224 Chlorophyllase: Chlor 100.0 6.4E-44 1.4E-48 298.8 26.2 296 22-321 4-306 (307)
2 PLN00021 chlorophyllase 100.0 2.1E-38 4.6E-43 285.2 30.7 290 22-317 12-312 (313)
3 PF12740 Chlorophyllase2: Chlo 100.0 7.5E-37 1.6E-41 262.4 23.9 245 50-296 3-258 (259)
4 PLN02385 hydrolase; alpha/beta 99.9 4.4E-21 9.4E-26 177.0 23.3 214 47-290 70-347 (349)
5 PHA02857 monoglyceride lipase; 99.9 5E-21 1.1E-25 170.7 21.9 207 47-288 9-273 (276)
6 COG4188 Predicted dienelactone 99.9 1.6E-21 3.4E-26 173.6 17.3 253 23-296 24-361 (365)
7 PLN02298 hydrolase, alpha/beta 99.9 5.5E-21 1.2E-25 174.9 20.8 231 28-292 26-321 (330)
8 PF03403 PAF-AH_p_II: Platelet 99.9 7.7E-21 1.7E-25 175.5 14.4 204 62-291 98-361 (379)
9 KOG1455 Lysophospholipase [Lip 99.9 1.1E-19 2.4E-24 157.0 20.2 225 30-288 23-312 (313)
10 PRK13604 luxD acyl transferase 99.9 5.9E-20 1.3E-24 162.7 18.8 178 47-243 18-244 (307)
11 PRK05077 frsA fermentation/res 99.8 8.1E-19 1.7E-23 164.7 23.7 212 31-289 165-413 (414)
12 PLN02652 hydrolase; alpha/beta 99.8 7.9E-19 1.7E-23 163.5 22.5 209 47-290 119-389 (395)
13 COG2267 PldB Lysophospholipase 99.8 2.6E-18 5.6E-23 154.3 23.3 211 48-291 19-297 (298)
14 PLN02824 hydrolase, alpha/beta 99.8 5.4E-19 1.2E-23 159.1 18.2 99 64-171 29-136 (294)
15 COG1647 Esterase/lipase [Gener 99.8 2.2E-19 4.8E-24 148.0 13.8 185 65-286 16-242 (243)
16 PRK10749 lysophospholipase L2; 99.8 2.5E-18 5.3E-23 157.4 21.7 119 48-172 40-166 (330)
17 PRK00870 haloalkane dehalogena 99.8 2E-18 4.2E-23 156.1 20.7 100 63-170 45-148 (302)
18 PF01738 DLH: Dienelactone hyd 99.8 6.4E-19 1.4E-23 151.8 14.8 206 51-289 1-218 (218)
19 TIGR02240 PHA_depoly_arom poly 99.8 4E-18 8.8E-23 152.1 19.8 100 64-172 25-126 (276)
20 PF12695 Abhydrolase_5: Alpha/ 99.8 8.3E-19 1.8E-23 140.7 13.8 143 66-243 1-145 (145)
21 COG1506 DAP2 Dipeptidyl aminop 99.8 2.2E-18 4.8E-23 169.7 18.9 220 29-291 360-619 (620)
22 PRK03592 haloalkane dehalogena 99.8 3.5E-18 7.6E-23 153.9 18.6 99 63-170 26-126 (295)
23 PRK10673 acyl-CoA esterase; Pr 99.8 4.7E-18 1E-22 149.4 18.1 172 55-246 7-238 (255)
24 PLN02965 Probable pheophorbida 99.8 6.3E-18 1.4E-22 149.1 18.4 167 66-249 5-239 (255)
25 COG0412 Dienelactone hydrolase 99.8 3.1E-17 6.8E-22 142.3 21.6 212 47-290 10-235 (236)
26 TIGR02427 protocat_pcaD 3-oxoa 99.8 3.7E-18 7.9E-23 148.2 15.5 166 63-247 12-237 (251)
27 TIGR03343 biphenyl_bphD 2-hydr 99.8 2E-17 4.3E-22 147.7 20.0 167 63-247 29-267 (282)
28 TIGR03611 RutD pyrimidine util 99.8 1.4E-17 3.1E-22 145.6 18.1 101 63-171 12-114 (257)
29 PRK10566 esterase; Provisional 99.8 1E-17 2.2E-22 147.1 16.7 188 50-243 11-232 (249)
30 TIGR03056 bchO_mg_che_rel puta 99.8 4.3E-17 9.3E-22 144.8 19.7 99 63-170 27-128 (278)
31 PLN02894 hydrolase, alpha/beta 99.8 9.1E-17 2E-21 150.6 21.9 103 62-172 103-211 (402)
32 PLN02679 hydrolase, alpha/beta 99.8 4E-17 8.7E-22 151.1 18.9 99 64-171 88-190 (360)
33 KOG3847 Phospholipase A2 (plat 99.8 1.5E-17 3.3E-22 143.3 14.6 205 61-293 115-376 (399)
34 PRK10349 carboxylesterase BioH 99.8 4.4E-17 9.6E-22 143.6 17.6 161 65-249 14-242 (256)
35 PLN03087 BODYGUARD 1 domain co 99.8 2.1E-16 4.6E-21 149.5 22.7 116 48-171 185-308 (481)
36 PRK10985 putative hydrolase; P 99.8 1.5E-16 3.2E-21 145.3 21.1 194 32-249 29-301 (324)
37 TIGR03695 menH_SHCHC 2-succiny 99.8 5.7E-17 1.2E-21 140.4 17.2 98 65-171 2-104 (251)
38 PLN02578 hydrolase 99.7 1.5E-16 3.3E-21 147.0 20.0 100 63-171 85-186 (354)
39 PRK11126 2-succinyl-6-hydroxy- 99.7 8.9E-17 1.9E-21 140.2 17.3 97 64-171 2-101 (242)
40 PLN02511 hydrolase 99.7 1.1E-16 2.5E-21 149.3 18.4 196 31-249 68-345 (388)
41 PRK14875 acetoin dehydrogenase 99.7 1.3E-16 2.8E-21 148.1 17.3 107 56-171 123-231 (371)
42 PRK03204 haloalkane dehalogena 99.7 1.7E-16 3.7E-21 142.4 17.4 100 63-171 33-135 (286)
43 PF00326 Peptidase_S9: Prolyl 99.7 2.4E-17 5.2E-22 141.5 11.2 174 80-291 3-212 (213)
44 TIGR01250 pro_imino_pep_2 prol 99.7 2.1E-16 4.6E-21 140.2 16.7 102 62-171 23-130 (288)
45 TIGR01738 bioH putative pimelo 99.7 2.4E-16 5.1E-21 136.4 16.5 160 65-248 5-233 (245)
46 PLN02211 methyl indole-3-aceta 99.7 1.1E-15 2.3E-20 136.3 20.3 104 62-171 16-121 (273)
47 PRK06489 hypothetical protein; 99.7 5.4E-16 1.2E-20 143.7 18.7 100 64-171 69-188 (360)
48 KOG4178 Soluble epoxide hydrol 99.7 1.7E-15 3.6E-20 133.1 20.3 102 60-169 40-145 (322)
49 PLN02442 S-formylglutathione h 99.7 2.6E-15 5.6E-20 134.4 21.3 200 32-242 16-261 (283)
50 PF12697 Abhydrolase_6: Alpha/ 99.7 2.1E-16 4.6E-21 134.7 13.7 162 67-247 1-220 (228)
51 TIGR03100 hydr1_PEP hydrolase, 99.7 2E-15 4.3E-20 134.6 20.2 121 47-173 10-135 (274)
52 PRK10162 acetyl esterase; Prov 99.7 4.2E-15 9.1E-20 135.2 22.4 208 48-290 66-317 (318)
53 TIGR02821 fghA_ester_D S-formy 99.7 1.5E-15 3.2E-20 135.5 17.9 187 47-242 23-255 (275)
54 PLN03084 alpha/beta hydrolase 99.7 2.3E-15 4.9E-20 139.6 19.6 102 62-172 125-232 (383)
55 TIGR01607 PST-A Plasmodium sub 99.7 1.5E-15 3.3E-20 138.9 17.2 191 47-247 6-316 (332)
56 KOG4409 Predicted hydrolase/ac 99.7 1.5E-15 3.2E-20 133.9 16.1 108 62-174 88-197 (365)
57 PRK11460 putative hydrolase; P 99.7 4.7E-15 1E-19 128.8 18.8 164 61-242 13-191 (232)
58 PF06500 DUF1100: Alpha/beta h 99.7 4.1E-15 8.9E-20 135.9 16.4 194 29-245 160-395 (411)
59 PF05448 AXE1: Acetyl xylan es 99.6 3.2E-15 7E-20 135.1 15.1 196 32-242 54-302 (320)
60 PRK07581 hypothetical protein; 99.6 8.1E-15 1.8E-19 134.7 16.4 100 63-170 40-157 (339)
61 KOG1552 Predicted alpha/beta h 99.6 1.5E-14 3.2E-19 123.0 16.3 188 33-243 34-233 (258)
62 PRK08775 homoserine O-acetyltr 99.6 8.9E-15 1.9E-19 134.7 16.3 83 79-171 84-172 (343)
63 PLN02872 triacylglycerol lipas 99.6 3.7E-15 8.1E-20 138.5 13.7 130 20-157 30-178 (395)
64 KOG1454 Predicted hydrolase/ac 99.6 8.6E-15 1.9E-19 132.9 15.6 101 62-169 56-160 (326)
65 COG0429 Predicted hydrolase of 99.6 2.9E-14 6.2E-19 125.2 18.1 201 25-248 40-320 (345)
66 PF12715 Abhydrolase_7: Abhydr 99.6 6.3E-15 1.4E-19 132.5 13.3 196 21-231 75-334 (390)
67 KOG4391 Predicted alpha/beta h 99.6 1.2E-14 2.6E-19 119.5 13.3 193 31-245 51-265 (300)
68 TIGR01392 homoserO_Ac_trn homo 99.6 7.8E-15 1.7E-19 135.5 14.0 116 48-171 15-161 (351)
69 PRK10115 protease 2; Provision 99.6 8.9E-14 1.9E-18 138.2 21.3 199 27-243 409-653 (686)
70 TIGR00976 /NonD putative hydro 99.6 6.6E-14 1.4E-18 136.6 19.3 116 47-171 5-131 (550)
71 PRK00175 metX homoserine O-ace 99.6 4.7E-14 1E-18 131.5 16.0 102 63-171 47-181 (379)
72 TIGR01840 esterase_phb esteras 99.6 1E-13 2.3E-18 118.8 16.8 110 54-171 2-129 (212)
73 TIGR03101 hydr2_PEP hydrolase, 99.6 7.4E-14 1.6E-18 122.9 16.0 122 48-174 9-136 (266)
74 PLN02980 2-oxoglutarate decarb 99.6 9.3E-14 2E-18 149.4 19.3 100 63-171 1370-1479(1655)
75 PRK11071 esterase YqiA; Provis 99.6 2.6E-13 5.7E-18 114.2 17.2 145 65-242 2-172 (190)
76 PF02230 Abhydrolase_2: Phosph 99.6 1.2E-13 2.6E-18 118.7 14.7 173 55-242 6-198 (216)
77 COG3458 Acetyl esterase (deace 99.6 1.9E-14 4E-19 122.3 9.2 202 31-245 51-302 (321)
78 KOG3043 Predicted hydrolase re 99.5 8.1E-14 1.8E-18 115.5 12.6 199 50-290 27-242 (242)
79 KOG1838 Alpha/beta hydrolase [ 99.5 1.3E-12 2.9E-17 118.7 20.4 129 31-173 90-237 (409)
80 TIGR01836 PHA_synth_III_C poly 99.5 4.3E-13 9.3E-18 123.8 17.6 113 48-171 45-170 (350)
81 KOG2564 Predicted acetyltransf 99.5 3.9E-13 8.6E-18 114.7 15.5 115 50-169 61-179 (343)
82 TIGR01249 pro_imino_pep_1 prol 99.5 5.6E-13 1.2E-17 120.8 17.1 98 64-170 27-128 (306)
83 PRK05855 short chain dehydroge 99.5 3.7E-13 8.1E-18 132.3 16.5 102 48-160 12-115 (582)
84 KOG1515 Arylacetamide deacetyl 99.5 1.3E-11 2.7E-16 111.5 21.3 196 32-245 59-312 (336)
85 COG2945 Predicted hydrolase of 99.4 5.7E-12 1.2E-16 102.2 15.7 158 56-243 20-188 (210)
86 TIGR01838 PHA_synth_I poly(R)- 99.4 4E-12 8.6E-17 121.8 17.2 115 48-170 171-300 (532)
87 COG0657 Aes Esterase/lipase [L 99.4 1.5E-11 3.2E-16 111.8 17.4 180 48-242 61-286 (312)
88 COG0400 Predicted esterase [Ge 99.4 1.4E-11 2.9E-16 104.1 14.3 162 61-242 15-188 (207)
89 PF07859 Abhydrolase_3: alpha/ 99.4 4.7E-12 1E-16 108.2 10.7 163 67-243 1-208 (211)
90 PF02129 Peptidase_S15: X-Pro 99.4 4.5E-12 9.8E-17 112.9 10.7 115 48-171 2-135 (272)
91 KOG4667 Predicted esterase [Li 99.3 9E-11 2E-15 96.8 15.6 182 47-248 19-244 (269)
92 KOG2382 Predicted alpha/beta h 99.3 6.8E-11 1.5E-15 104.3 15.2 114 51-169 38-156 (315)
93 PRK07868 acyl-CoA synthetase; 99.3 1.4E-10 3.1E-15 120.6 18.3 114 48-169 46-174 (994)
94 COG3571 Predicted hydrolase of 99.3 1.4E-09 3E-14 85.7 18.5 194 54-287 5-210 (213)
95 PF12146 Hydrolase_4: Putative 99.3 4.2E-11 9E-16 85.4 9.2 77 49-126 2-78 (79)
96 KOG2984 Predicted hydrolase [G 99.3 1.8E-11 3.9E-16 99.9 7.9 180 65-287 43-275 (277)
97 KOG2100 Dipeptidyl aminopeptid 99.3 1.4E-10 3E-15 116.1 15.9 204 48-290 507-749 (755)
98 PRK06765 homoserine O-acetyltr 99.2 3.3E-10 7.1E-15 105.5 16.8 103 60-169 52-193 (389)
99 PF10503 Esterase_phd: Esteras 99.2 6.1E-10 1.3E-14 95.0 16.5 114 51-169 1-129 (220)
100 PRK05371 x-prolyl-dipeptidyl a 99.2 1.1E-09 2.3E-14 110.1 19.9 90 82-171 270-372 (767)
101 TIGR03230 lipo_lipase lipoprot 99.2 1.9E-10 4.1E-15 107.5 13.1 109 62-172 39-154 (442)
102 cd00707 Pancreat_lipase_like P 99.2 9.8E-11 2.1E-15 104.2 10.5 110 62-173 34-148 (275)
103 PF00561 Abhydrolase_1: alpha/ 99.2 9.8E-11 2.1E-15 100.5 9.8 139 92-247 1-219 (230)
104 KOG3101 Esterase D [General fu 99.1 1.1E-09 2.3E-14 90.2 11.2 128 47-174 24-178 (283)
105 KOG2281 Dipeptidyl aminopeptid 99.1 1.6E-09 3.4E-14 102.2 13.6 192 35-243 614-846 (867)
106 PF06821 Ser_hydrolase: Serine 99.1 1.3E-09 2.8E-14 89.8 11.6 147 67-245 1-155 (171)
107 PF08840 BAAT_C: BAAT / Acyl-C 99.1 5.6E-10 1.2E-14 95.6 9.7 166 113-290 4-212 (213)
108 KOG4627 Kynurenine formamidase 99.1 6.3E-10 1.4E-14 91.2 8.6 181 48-249 53-253 (270)
109 TIGR03502 lipase_Pla1_cef extr 99.1 1.9E-09 4.1E-14 106.8 13.7 96 64-159 449-575 (792)
110 PF06342 DUF1057: Alpha/beta h 99.0 9.7E-09 2.1E-13 88.9 14.6 120 48-173 16-138 (297)
111 COG3509 LpqC Poly(3-hydroxybut 99.0 6E-09 1.3E-13 90.5 12.4 116 48-168 44-175 (312)
112 KOG2624 Triglyceride lipase-ch 99.0 1.8E-08 3.9E-13 93.1 15.0 131 27-172 41-199 (403)
113 COG4099 Predicted peptidase [G 98.9 5.7E-09 1.2E-13 90.2 10.1 149 47-215 170-334 (387)
114 PF05728 UPF0227: Uncharacteri 98.9 3.3E-08 7.2E-13 82.4 14.5 143 67-242 2-170 (187)
115 COG3208 GrsT Predicted thioest 98.9 2.8E-08 6E-13 84.4 13.5 92 62-161 5-96 (244)
116 PRK10439 enterobactin/ferric e 98.9 5.2E-08 1.1E-12 91.4 16.4 123 47-172 190-323 (411)
117 TIGR01839 PHA_synth_II poly(R) 98.9 8.2E-08 1.8E-12 91.7 16.8 115 48-169 198-325 (560)
118 PF08538 DUF1749: Protein of u 98.9 1.8E-08 3.9E-13 89.0 11.5 116 51-173 20-149 (303)
119 COG4757 Predicted alpha/beta h 98.9 1.1E-08 2.3E-13 85.6 8.8 110 48-159 15-125 (281)
120 PF00975 Thioesterase: Thioest 98.9 2.9E-08 6.2E-13 85.8 11.6 98 65-171 1-103 (229)
121 PF00756 Esterase: Putative es 98.8 2.2E-08 4.7E-13 87.9 8.5 126 47-172 4-150 (251)
122 COG2936 Predicted acyl esteras 98.8 3.8E-08 8.2E-13 93.6 9.6 126 32-170 17-157 (563)
123 PF02273 Acyl_transf_2: Acyl t 98.7 2E-07 4.3E-12 78.9 12.4 176 48-242 12-236 (294)
124 TIGR01849 PHB_depoly_PhaZ poly 98.7 1.1E-06 2.3E-11 81.7 17.9 110 50-169 85-205 (406)
125 PF07819 PGAP1: PGAP1-like pro 98.7 1.9E-07 4E-12 80.6 11.9 105 63-169 3-120 (225)
126 PF06057 VirJ: Bacterial virul 98.7 3.1E-07 6.8E-12 75.6 11.9 101 65-174 3-109 (192)
127 COG2272 PnbA Carboxylesterase 98.7 1.1E-07 2.4E-12 88.4 9.7 120 48-172 77-217 (491)
128 cd00312 Esterase_lipase Estera 98.7 8.4E-08 1.8E-12 92.8 9.1 116 48-170 76-211 (493)
129 COG0596 MhpC Predicted hydrola 98.6 5.4E-07 1.2E-11 77.5 12.9 98 64-171 21-122 (282)
130 PF10230 DUF2305: Uncharacteri 98.6 4.6E-07 1E-11 80.2 12.6 108 64-172 2-122 (266)
131 KOG2112 Lysophospholipase [Lip 98.6 6.7E-07 1.5E-11 74.2 11.2 167 64-243 3-188 (206)
132 COG1770 PtrB Protease II [Amin 98.6 1.2E-06 2.6E-11 83.9 14.2 153 11-173 396-563 (682)
133 PF00151 Lipase: Lipase; Inte 98.6 9.9E-08 2.1E-12 86.8 6.7 110 62-173 69-188 (331)
134 PF03959 FSH1: Serine hydrolas 98.5 4.2E-07 9.2E-12 77.8 9.1 158 63-243 3-201 (212)
135 PF00135 COesterase: Carboxyle 98.5 7.3E-07 1.6E-11 86.9 10.7 118 49-171 107-244 (535)
136 PF03583 LIP: Secretory lipase 98.5 3.6E-06 7.7E-11 75.6 13.0 76 82-161 17-93 (290)
137 COG2021 MET2 Homoserine acetyl 98.4 8.2E-06 1.8E-10 73.6 14.8 93 61-161 48-169 (368)
138 PF09752 DUF2048: Uncharacteri 98.4 1.5E-05 3.3E-10 71.7 16.2 108 49-161 75-197 (348)
139 KOG2931 Differentiation-relate 98.4 0.00011 2.4E-09 64.1 20.2 126 34-174 22-159 (326)
140 COG1505 Serine proteases of th 98.4 4.9E-06 1.1E-10 78.8 13.0 197 27-243 387-624 (648)
141 PF06028 DUF915: Alpha/beta hy 98.4 3.7E-06 8.1E-11 73.6 11.2 109 63-174 10-146 (255)
142 PF01674 Lipase_2: Lipase (cla 98.4 7.6E-07 1.6E-11 76.0 6.0 89 66-159 3-95 (219)
143 COG3545 Predicted esterase of 98.4 2.4E-05 5.3E-10 63.2 14.1 149 65-243 3-156 (181)
144 KOG2551 Phospholipase/carboxyh 98.3 4.8E-05 1E-09 63.8 15.9 156 63-243 4-202 (230)
145 PF12048 DUF3530: Protein of u 98.2 5.5E-05 1.2E-09 68.5 15.4 150 48-202 70-255 (310)
146 KOG2237 Predicted serine prote 98.2 3E-05 6.4E-10 74.1 13.3 136 26-173 433-585 (712)
147 PF05057 DUF676: Putative seri 98.2 1E-05 2.2E-10 69.6 9.1 93 63-158 3-97 (217)
148 PF05990 DUF900: Alpha/beta hy 98.2 2.6E-05 5.6E-10 67.7 11.7 135 62-208 16-165 (233)
149 PF05677 DUF818: Chlamydia CHL 98.2 3.8E-05 8.1E-10 68.6 12.5 119 33-161 111-237 (365)
150 PRK04940 hypothetical protein; 98.2 2.1E-05 4.5E-10 64.7 10.2 91 139-242 60-161 (180)
151 COG2819 Predicted hydrolase of 98.2 5.8E-05 1.3E-09 65.4 13.4 138 32-172 7-172 (264)
152 PLN02733 phosphatidylcholine-s 98.2 2.2E-05 4.7E-10 74.1 11.8 89 75-170 105-199 (440)
153 COG3319 Thioesterase domains o 98.1 1.7E-05 3.6E-10 69.3 9.8 99 65-173 1-104 (257)
154 COG3243 PhaC Poly(3-hydroxyalk 98.1 2.5E-05 5.4E-10 71.5 11.1 104 51-161 93-203 (445)
155 KOG3253 Predicted alpha/beta h 98.1 9E-05 2E-09 70.4 14.3 195 63-290 175-380 (784)
156 COG2382 Fes Enterochelin ester 98.1 0.00014 3.1E-09 64.0 14.2 183 48-242 79-279 (299)
157 PF03096 Ndr: Ndr family; Int 98.0 0.00035 7.6E-09 61.5 15.3 118 48-174 8-136 (283)
158 PRK10252 entF enterobactin syn 98.0 3.7E-05 8E-10 83.0 10.9 99 63-171 1067-1170(1296)
159 COG1073 Hydrolases of the alph 97.9 8.3E-05 1.8E-09 66.1 10.6 210 49-289 31-298 (299)
160 PF10142 PhoPQ_related: PhoPQ- 97.9 0.0016 3.5E-08 59.9 18.0 200 52-293 51-325 (367)
161 PTZ00472 serine carboxypeptida 97.9 0.00013 2.7E-09 69.8 10.9 126 48-174 60-218 (462)
162 KOG1553 Predicted alpha/beta h 97.8 0.00011 2.4E-09 65.4 9.2 156 48-213 224-400 (517)
163 PF10340 DUF2424: Protein of u 97.8 0.00026 5.6E-09 64.9 12.0 115 52-175 107-238 (374)
164 COG4814 Uncharacterized protei 97.8 8E-05 1.7E-09 63.6 8.1 103 65-170 46-174 (288)
165 KOG3975 Uncharacterized conser 97.8 0.00056 1.2E-08 58.4 13.0 119 48-171 10-146 (301)
166 COG0627 Predicted esterase [Ge 97.7 7.3E-05 1.6E-09 67.5 6.1 114 61-174 51-189 (316)
167 PF11339 DUF3141: Protein of u 97.6 0.0018 4E-08 61.0 14.1 91 61-161 66-162 (581)
168 COG1075 LipA Predicted acetylt 97.6 0.00019 4.2E-09 65.7 7.6 97 64-170 59-162 (336)
169 KOG1516 Carboxylesterase and r 97.6 0.00032 6.9E-09 68.8 9.0 106 48-158 94-214 (545)
170 COG3946 VirJ Type IV secretory 97.5 0.0037 8.1E-08 57.1 14.4 102 49-161 245-348 (456)
171 KOG3724 Negative regulator of 97.4 0.0018 3.9E-08 63.6 11.9 112 48-160 65-203 (973)
172 PF11144 DUF2920: Protein of u 97.4 0.003 6.5E-08 58.3 12.3 56 47-102 18-76 (403)
173 COG4782 Uncharacterized protei 97.3 0.0026 5.7E-08 57.4 10.6 108 63-173 115-235 (377)
174 PF05577 Peptidase_S28: Serine 97.2 0.0042 9.1E-08 59.1 11.3 106 64-171 29-147 (434)
175 PF07082 DUF1350: Protein of u 97.1 0.0076 1.7E-07 51.9 11.2 100 53-161 8-112 (250)
176 smart00824 PKS_TE Thioesterase 97.1 0.0046 1E-07 51.8 10.1 87 75-171 10-101 (212)
177 COG3150 Predicted esterase [Ge 97.0 0.0045 9.9E-08 49.8 8.0 89 67-173 2-92 (191)
178 KOG2565 Predicted hydrolases o 97.0 0.0094 2E-07 54.0 10.5 107 48-161 133-251 (469)
179 PF00450 Peptidase_S10: Serine 96.9 0.017 3.8E-07 54.4 12.7 125 48-174 23-183 (415)
180 PF02450 LCAT: Lecithin:choles 96.3 0.013 2.9E-07 54.8 7.2 80 79-171 66-159 (389)
181 KOG3967 Uncharacterized conser 96.1 0.12 2.5E-06 43.5 11.1 103 63-172 100-227 (297)
182 KOG4388 Hormone-sensitive lipa 96.0 0.031 6.8E-07 53.5 8.3 100 54-159 386-489 (880)
183 PF01764 Lipase_3: Lipase (cla 95.9 0.019 4E-07 45.3 5.7 23 138-160 63-85 (140)
184 KOG2541 Palmitoyl protein thio 95.8 0.084 1.8E-06 45.9 9.4 96 65-169 24-125 (296)
185 PLN02209 serine carboxypeptida 95.8 0.18 3.9E-06 47.9 12.5 139 31-174 36-214 (437)
186 PLN03016 sinapoylglucose-malat 95.7 0.24 5.1E-06 47.1 12.8 138 32-174 35-212 (433)
187 cd00741 Lipase Lipase. Lipase 95.6 0.037 8E-07 44.5 6.4 36 137-172 26-67 (153)
188 PLN02606 palmitoyl-protein thi 95.6 0.12 2.7E-06 46.1 10.0 97 64-169 26-129 (306)
189 KOG4840 Predicted hydrolases o 95.6 0.061 1.3E-06 45.5 7.4 99 64-173 36-145 (299)
190 PF11187 DUF2974: Protein of u 95.4 0.051 1.1E-06 46.8 6.8 51 114-172 67-123 (224)
191 PF02089 Palm_thioest: Palmito 95.4 0.044 9.5E-07 48.4 6.4 100 64-169 5-113 (279)
192 KOG2369 Lecithin:cholesterol a 95.0 0.061 1.3E-06 50.4 6.3 75 78-161 124-204 (473)
193 KOG4389 Acetylcholinesterase/B 94.9 0.072 1.6E-06 50.1 6.5 103 48-155 118-234 (601)
194 PLN02517 phosphatidylcholine-s 94.4 0.084 1.8E-06 51.2 5.9 74 79-158 157-232 (642)
195 KOG2183 Prolylcarboxypeptidase 94.3 0.17 3.6E-06 46.8 7.3 96 65-161 81-189 (492)
196 PLN02633 palmitoyl protein thi 94.0 0.61 1.3E-05 41.8 10.1 96 65-169 26-128 (314)
197 PF08386 Abhydrolase_4: TAP-li 94.0 0.22 4.8E-06 37.2 6.3 43 193-245 34-76 (103)
198 cd00519 Lipase_3 Lipase (class 93.9 0.098 2.1E-06 45.1 5.0 22 138-159 127-148 (229)
199 PF06259 Abhydrolase_8: Alpha/ 93.9 1.2 2.6E-05 36.8 11.0 107 64-172 19-145 (177)
200 KOG4372 Predicted alpha/beta h 93.3 0.15 3.3E-06 47.0 5.2 85 62-156 78-167 (405)
201 PF01083 Cutinase: Cutinase; 92.9 0.83 1.8E-05 37.9 8.7 32 138-169 80-119 (179)
202 PLN02454 triacylglycerol lipas 92.9 0.18 3.9E-06 47.1 5.1 20 140-159 229-248 (414)
203 PF04083 Abhydro_lipase: Parti 92.4 0.27 5.8E-06 33.1 4.1 48 29-80 7-59 (63)
204 PLN02571 triacylglycerol lipas 92.4 0.2 4.4E-06 46.8 4.8 20 140-159 227-246 (413)
205 KOG2182 Hydrolytic enzymes of 92.2 1.3 2.9E-05 42.0 9.9 112 54-166 74-201 (514)
206 PF05705 DUF829: Eukaryotic pr 92.1 1 2.3E-05 39.0 8.8 166 67-246 2-225 (240)
207 PLN02162 triacylglycerol lipas 92.1 0.25 5.5E-06 46.6 5.1 21 138-158 277-297 (475)
208 PLN00413 triacylglycerol lipas 92.0 0.27 5.9E-06 46.6 5.2 23 137-159 282-304 (479)
209 PLN02408 phospholipase A1 91.5 0.31 6.6E-06 44.9 4.8 21 140-160 201-221 (365)
210 KOG1282 Serine carboxypeptidas 90.9 3.4 7.4E-05 39.4 11.3 138 33-174 43-215 (454)
211 PLN02934 triacylglycerol lipas 90.9 0.38 8.2E-06 46.0 4.9 22 138-159 320-341 (515)
212 PF07519 Tannase: Tannase and 90.2 2.4 5.2E-05 40.9 9.8 122 48-174 14-152 (474)
213 PLN02310 triacylglycerol lipas 90.0 0.54 1.2E-05 43.9 5.1 21 139-159 209-229 (405)
214 PLN02324 triacylglycerol lipas 89.9 0.51 1.1E-05 44.1 4.7 20 140-159 216-235 (415)
215 KOG1283 Serine carboxypeptidas 89.4 3.4 7.4E-05 37.2 9.2 125 48-174 13-168 (414)
216 PLN02802 triacylglycerol lipas 88.8 0.69 1.5E-05 44.3 4.9 21 140-160 331-351 (509)
217 PLN02753 triacylglycerol lipas 88.7 0.68 1.5E-05 44.5 4.8 21 139-159 312-332 (531)
218 PF04301 DUF452: Protein of un 88.6 1.9 4.2E-05 36.7 7.0 77 64-170 11-88 (213)
219 PLN02719 triacylglycerol lipas 88.5 0.71 1.5E-05 44.2 4.7 21 139-159 298-318 (518)
220 PLN03037 lipase class 3 family 88.4 0.81 1.7E-05 43.9 5.1 21 139-159 318-338 (525)
221 PF11288 DUF3089: Protein of u 87.8 1.1 2.3E-05 38.0 4.9 24 137-160 93-116 (207)
222 PLN02761 lipase class 3 family 87.1 0.77 1.7E-05 44.1 4.1 21 139-159 294-314 (527)
223 COG2939 Carboxypeptidase C (ca 86.7 1.4 3.1E-05 42.0 5.6 103 51-159 87-218 (498)
224 KOG4540 Putative lipase essent 86.6 1.4 3E-05 38.9 5.0 35 138-172 275-309 (425)
225 COG5153 CVT17 Putative lipase 86.6 1.4 3E-05 38.9 5.0 35 138-172 275-309 (425)
226 PF08237 PE-PPE: PE-PPE domain 86.4 3.7 7.9E-05 35.4 7.6 65 91-160 2-69 (225)
227 PLN02847 triacylglycerol lipas 85.8 1.3 2.8E-05 43.3 4.9 21 139-159 251-271 (633)
228 KOG4569 Predicted lipase [Lipi 85.2 1.3 2.9E-05 40.6 4.6 23 138-160 170-192 (336)
229 PLN02213 sinapoylglucose-malat 85.2 3.2 7E-05 37.7 7.1 81 93-174 3-98 (319)
230 COG4553 DepA Poly-beta-hydroxy 85.0 26 0.00057 31.3 12.0 84 61-154 100-184 (415)
231 COG4287 PqaA PhoPQ-activated p 83.2 2.7 5.8E-05 38.6 5.4 98 137-243 232-370 (507)
232 KOG1551 Uncharacterized conser 82.6 2.3 5E-05 37.2 4.6 110 49-161 100-217 (371)
233 TIGR03712 acc_sec_asp2 accesso 80.0 15 0.00033 35.1 9.3 113 53-174 279-392 (511)
234 KOG1202 Animal-type fatty acid 78.2 12 0.00026 39.8 8.6 94 61-170 2120-2217(2376)
235 COG0596 MhpC Predicted hydrola 77.0 4 8.6E-05 34.1 4.5 50 191-249 219-268 (282)
236 PF03283 PAE: Pectinacetyleste 74.7 25 0.00054 32.6 9.2 23 137-159 154-176 (361)
237 KOG2029 Uncharacterized conser 67.1 19 0.00041 35.4 6.7 22 137-158 524-545 (697)
238 PF06850 PHB_depo_C: PHB de-po 66.0 4.8 0.0001 33.6 2.2 50 193-247 134-183 (202)
239 PF06441 EHN: Epoxide hydrolas 61.2 11 0.00024 28.6 3.3 23 60-82 88-110 (112)
240 PF09994 DUF2235: Uncharacteri 61.2 58 0.0012 29.0 8.5 24 137-160 90-113 (277)
241 KOG0781 Signal recognition par 57.6 36 0.00078 32.7 6.6 76 68-159 442-518 (587)
242 COG3673 Uncharacterized conser 57.1 1.6E+02 0.0034 27.0 10.1 91 63-159 30-142 (423)
243 PF10605 3HBOH: 3HB-oligomer h 55.0 51 0.0011 32.6 7.3 52 191-246 552-606 (690)
244 PF06792 UPF0261: Uncharacteri 53.7 1.5E+02 0.0033 27.9 10.0 91 67-161 4-117 (403)
245 KOG1532 GTPase XAB1, interacts 51.2 86 0.0019 28.0 7.4 141 62-202 16-190 (366)
246 PF05277 DUF726: Protein of un 49.9 45 0.00097 30.8 5.9 34 137-170 218-258 (345)
247 PF06309 Torsin: Torsin; Inte 49.3 30 0.00066 26.8 4.0 30 62-91 50-81 (127)
248 KOG2872 Uroporphyrinogen decar 45.3 28 0.0006 31.0 3.6 30 63-99 251-280 (359)
249 PRK02399 hypothetical protein; 43.9 2.9E+02 0.0062 26.1 10.4 91 68-161 6-119 (406)
250 PF10081 Abhydrolase_9: Alpha/ 43.2 1.6E+02 0.0034 26.4 8.0 97 72-173 42-148 (289)
251 COG0529 CysC Adenylylsulfate k 42.9 2E+02 0.0043 24.0 8.8 38 62-99 20-59 (197)
252 KOG2521 Uncharacterized conser 41.9 1.4E+02 0.003 27.7 7.7 86 66-156 40-126 (350)
253 PRK13256 thiopurine S-methyltr 40.5 32 0.0007 29.6 3.3 29 66-99 45-73 (226)
254 KOG2585 Uncharacterized conser 39.9 52 0.0011 31.1 4.7 36 63-98 265-300 (453)
255 TIGR03709 PPK2_rel_1 polyphosp 38.7 41 0.00089 29.7 3.8 38 62-99 53-92 (264)
256 PF01656 CbiA: CobQ/CobB/MinD/ 38.1 51 0.0011 26.9 4.2 32 68-99 2-35 (195)
257 TIGR00632 vsr DNA mismatch end 37.5 1.9E+02 0.004 22.1 6.8 15 83-97 99-113 (117)
258 PF03853 YjeF_N: YjeF-related 36.6 55 0.0012 26.6 4.0 35 63-97 24-58 (169)
259 COG3727 Vsr DNA G:T-mismatch r 35.7 77 0.0017 24.7 4.3 36 63-98 56-115 (150)
260 PF05724 TPMT: Thiopurine S-me 35.0 76 0.0016 27.1 4.8 31 64-99 37-67 (218)
261 PF13207 AAA_17: AAA domain; P 34.9 48 0.001 24.7 3.2 31 67-99 1-32 (121)
262 PRK05579 bifunctional phosphop 34.4 3.1E+02 0.0067 25.9 9.1 59 80-146 135-196 (399)
263 TIGR02816 pfaB_fam PfaB family 34.1 1.6E+02 0.0034 29.1 7.3 24 137-160 263-286 (538)
264 PF08484 Methyltransf_14: C-me 33.2 1.4E+02 0.0031 24.0 5.9 36 137-172 67-104 (160)
265 KOG0256 1-aminocyclopropane-1- 33.1 1.2E+02 0.0027 28.6 5.9 41 121-161 129-169 (471)
266 cd01714 ETF_beta The electron 32.6 3E+02 0.0065 23.1 8.2 71 82-168 67-145 (202)
267 COG3946 VirJ Type IV secretory 32.3 2.6E+02 0.0056 26.5 7.8 111 54-172 39-157 (456)
268 TIGR00521 coaBC_dfp phosphopan 31.9 4E+02 0.0087 25.1 9.3 75 66-146 114-193 (390)
269 COG0505 CarA Carbamoylphosphat 31.4 1.4E+02 0.0031 27.5 6.0 67 81-159 191-269 (368)
270 smart00827 PKS_AT Acyl transfe 30.9 55 0.0012 29.0 3.4 24 138-161 81-104 (298)
271 TIGR02873 spore_ylxY probable 30.1 76 0.0016 28.1 4.1 34 65-98 231-264 (268)
272 COG1255 Uncharacterized protei 30.0 54 0.0012 25.0 2.6 21 79-99 24-44 (129)
273 TIGR03131 malonate_mdcH malona 29.8 60 0.0013 28.9 3.5 24 138-161 75-98 (295)
274 PF05576 Peptidase_S37: PS-10 29.7 2.6E+02 0.0057 26.5 7.5 100 61-167 60-164 (448)
275 PF00698 Acyl_transf_1: Acyl t 29.0 44 0.00095 30.2 2.4 25 137-161 82-106 (318)
276 COG2830 Uncharacterized protei 28.9 1.7E+02 0.0036 23.9 5.3 78 65-172 12-90 (214)
277 PF03033 Glyco_transf_28: Glyc 28.6 59 0.0013 24.9 2.9 34 66-99 1-34 (139)
278 PF08257 Sulfakinin: Sulfakini 27.8 28 0.00062 13.6 0.4 6 238-243 2-7 (9)
279 TIGR03707 PPK2_P_aer polyphosp 27.6 72 0.0016 27.6 3.4 73 63-153 29-103 (230)
280 PF10605 3HBOH: 3HB-oligomer h 27.0 6.6E+02 0.014 25.3 11.5 38 137-174 283-323 (690)
281 PF14253 AbiH: Bacteriophage a 26.9 32 0.0007 30.1 1.2 15 137-151 233-247 (270)
282 TIGR02764 spore_ybaN_pdaB poly 26.8 70 0.0015 26.4 3.2 33 66-98 153-188 (191)
283 PRK13255 thiopurine S-methyltr 26.6 86 0.0019 26.7 3.7 16 84-99 52-67 (218)
284 PF01583 APS_kinase: Adenylyls 25.7 3.5E+02 0.0077 21.7 7.7 35 65-99 2-38 (156)
285 TIGR03840 TMPT_Se_Te thiopurin 25.7 87 0.0019 26.6 3.5 16 84-99 49-64 (213)
286 TIGR00128 fabD malonyl CoA-acy 25.7 74 0.0016 28.0 3.3 24 138-161 82-105 (290)
287 PF07519 Tannase: Tannase and 25.4 70 0.0015 30.9 3.3 50 192-245 352-407 (474)
288 cd03818 GT1_ExpC_like This fam 25.2 1.5E+02 0.0032 27.5 5.3 34 67-102 2-35 (396)
289 COG1152 CdhA CO dehydrogenase/ 25.0 4.4E+02 0.0095 26.3 8.2 37 61-97 496-535 (772)
290 COG4947 Uncharacterized protei 24.7 4.1E+02 0.0088 22.1 7.2 32 140-171 102-135 (227)
291 PF13728 TraF: F plasmid trans 24.7 3E+02 0.0065 23.4 6.7 45 62-106 120-165 (215)
292 TIGR02884 spore_pdaA delta-lac 24.5 1.1E+02 0.0023 26.2 3.9 34 65-98 187-221 (224)
293 TIGR03371 cellulose_yhjQ cellu 23.7 1.5E+02 0.0032 25.3 4.8 35 66-100 3-39 (246)
294 COG4822 CbiK Cobalamin biosynt 23.3 2.5E+02 0.0055 24.0 5.6 40 61-100 135-176 (265)
295 cd07025 Peptidase_S66 LD-Carbo 23.0 3E+02 0.0065 24.5 6.6 34 68-101 3-37 (282)
296 PF00326 Peptidase_S9: Prolyl 22.6 2.4E+02 0.0052 23.3 5.7 64 63-126 143-210 (213)
297 PLN03194 putative disease resi 22.3 3.5E+02 0.0077 22.5 6.3 46 52-97 12-60 (187)
298 PF03976 PPK2: Polyphosphate k 21.8 52 0.0011 28.4 1.4 37 64-100 30-68 (228)
299 PRK13230 nitrogenase reductase 21.6 1.8E+02 0.0039 25.6 4.9 33 66-99 3-37 (279)
300 CHL00175 minD septum-site dete 21.5 2.1E+02 0.0046 25.1 5.4 36 64-99 15-52 (281)
301 COG0431 Predicted flavoprotein 21.2 2.4E+02 0.0052 23.2 5.3 63 80-159 58-121 (184)
302 COG0552 FtsY Signal recognitio 20.7 6.7E+02 0.015 23.1 12.3 104 85-204 215-322 (340)
303 TIGR03018 pepcterm_TyrKin exop 20.6 2.9E+02 0.0063 23.0 5.8 38 62-99 33-73 (207)
304 cd01523 RHOD_Lact_B Member of 20.6 2E+02 0.0044 20.4 4.3 30 63-96 61-90 (100)
305 TIGR01007 eps_fam capsular exo 20.3 2.6E+02 0.0057 23.0 5.5 36 64-99 17-54 (204)
306 PF01075 Glyco_transf_9: Glyco 20.3 1.5E+02 0.0033 25.3 4.1 35 63-97 104-143 (247)
307 PLN03050 pyridoxine (pyridoxam 20.2 1.9E+02 0.0042 25.2 4.6 33 66-98 62-94 (246)
No 1
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=100.00 E-value=6.4e-44 Score=298.82 Aligned_cols=296 Identities=61% Similarity=0.999 Sum_probs=268.8
Q ss_pred cCCCCcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCC
Q 020199 22 ATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYT 101 (329)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g 101 (329)
...+.++.|.+.++...++.....+...+....|+.|...+.+|+|+|+||+.-....|..+.+++++|||+|++|+...
T Consensus 4 ~~~~VF~~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~ 83 (307)
T PF07224_consen 4 VTTDVFETGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYT 83 (307)
T ss_pred ccccceecCCceeEEEeecCCCCCCCCCCCCeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhc
Confidence 45788999999999999964332345688999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccCCCCCCC
Q 020199 102 SIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPVAGTSKT 177 (329)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~~~~~~~ 177 (329)
....+ ...++.+...+++|+...+.+.++.....+.++++++|||.||.+|+.+|..+. +.++|.+||..+..+.
T Consensus 84 ~~~p~-~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~ 162 (307)
T PF07224_consen 84 LFPPD-GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKG 162 (307)
T ss_pred ccCCC-chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCC
Confidence 65555 777888999999999999999998888889999999999999999999998875 9999999999999999
Q ss_pred CCCCCccccc--CccCCCCCeEEEecCCC-CCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccch
Q 020199 178 TGLDPSILSF--DSFDFSIPVTVIGTGLG-GVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVK 254 (329)
Q Consensus 178 ~~~~~~~~~~--~~~~i~~P~Lii~~~~G-~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~ 254 (329)
.+..|.++.+ .++++.+|+++|+++.| ..-.++|+|.|...++.+||++|+.+. ..++..+.|||+|+|....++.
T Consensus 163 ~~t~P~iLty~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~-~hfV~~dYGHmDmLDD~~~g~~ 241 (307)
T PF07224_consen 163 KQTPPPILTYVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPC-AHFVAKDYGHMDMLDDDTPGII 241 (307)
T ss_pred CCCCCCeeecCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccc-eeeeecccccccccccCccccc
Confidence 9999999887 66799999999999998 334578999999999999999999999 9999999999999999988888
Q ss_pred hcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcCChHHHHHHHhCCCCCcccccCcccccccce
Q 020199 255 SWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQILKDPSFAPIKLDSVEYIDASSM 321 (329)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 321 (329)
++. ..++|++|...|+.+++.+.+++++||+.||.++.+.+.++..+|.++|++|+ -|+.++..+
T Consensus 242 G~~-~~clCkng~~pr~pMRr~vgGivVAFL~a~l~~~~~d~~~I~~~p~~aP~~L~-~e~~~~~~~ 306 (307)
T PF07224_consen 242 GKL-SYCLCKNGKSPRDPMRRFVGGIVVAFLKAYLEGDDEDFMAIVKDPSLAPVKLD-PEQMDANFM 306 (307)
T ss_pred cce-eeEeecCCCCcchHHHHhhhhhHHHHHHHHHcCCHHHHHHHHhCCCCCCeecC-HhhccCccC
Confidence 886 88999999878999999999999999999999999999999999999999996 788777655
No 2
>PLN00021 chlorophyllase
Probab=100.00 E-value=2.1e-38 Score=285.22 Aligned_cols=290 Identities=53% Similarity=0.939 Sum_probs=242.8
Q ss_pred cCCCCcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCC
Q 020199 22 ATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYT 101 (329)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g 101 (329)
...+.+++|.+.+...++.+.+ ....++.+.||.|...+++|+|||+||++++...|..++++|+++||.|+++|+++
T Consensus 12 ~~~~~~~~g~~~~~~~~~~~~~--~~~~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g 89 (313)
T PLN00021 12 VATSVFETGKFPVELITVDESS--RPSPPKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYT 89 (313)
T ss_pred ccccccccCCceeEEEEecCCC--cCCCCceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCC
Confidence 3567899999999999998754 24678999999999888899999999999999999999999999999999999998
Q ss_pred CCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-------ccEEEEeccCCCC
Q 020199 102 SIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDPVAGT 174 (329)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-------v~~~v~~~p~~~~ 174 (329)
..... ......+..+.++|+.+.+...++....+|.++++++|||+||.+++.++..++ +++++.++|+.+.
T Consensus 90 ~~~~~-~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 90 LAGPD-GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred cCCCC-chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 65443 344455677778888876665555444568889999999999999999998764 7899999998776
Q ss_pred CCCCCCCCccccc--CccCCCCCeEEEecCCCCC--cccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCC
Q 020199 175 SKTTGLDPSILSF--DSFDFSIPVTVIGTGLGGV--ARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNP 250 (329)
Q Consensus 175 ~~~~~~~~~~~~~--~~~~i~~P~Lii~~~~G~~--D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~ 250 (329)
.......+.++.+ .++++.+|+|+++++.+.. +.++|+|.+...++.++++.+..++ ++++++++||++|+|...
T Consensus 169 ~~~~~~~p~il~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~-~~~~~~~~gH~~~~~~~~ 247 (313)
T PLN00021 169 SKGKQTPPPVLTYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPA-VHFVAKDYGHMDMLDDDT 247 (313)
T ss_pred ccccCCCCcccccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCe-eeeeecCCCcceeecCCC
Confidence 5444445555443 4458899999999665431 3467788999999999999999988 999999999999999987
Q ss_pred ccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcCChHHHHHHHhCCCCCcccccCccccc
Q 020199 251 SDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQILKDPSFAPIKLDSVEYID 317 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 317 (329)
.+..+.. ....|+.|. +++.+++.+.+++++||+++|.++++.+.++..+|.++|++|+.++|..
T Consensus 248 ~~~~~~~-~~~~c~~g~-~~~~~r~~~~g~~~aFl~~~l~~~~~~~~~~~~~~~~~p~~l~~~~~~~ 312 (313)
T PLN00021 248 SGIRGKI-TGCMCKNGK-PRKPMRRFVGGAVVAFLKAYLEGDTGDLDAIVDGPSLAPVKLDPVEFIE 312 (313)
T ss_pred ccccccc-cccccCCCC-chHHHHHHHHHHHHHHHHHHhcCchhHHHHHhcCCCCCCeecccccccc
Confidence 6666655 668899887 8999999999999999999999999999999999999999999999864
No 3
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=100.00 E-value=7.5e-37 Score=262.43 Aligned_cols=245 Identities=51% Similarity=0.914 Sum_probs=215.9
Q ss_pred CeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhh
Q 020199 50 PKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQN 129 (329)
Q Consensus 50 ~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 129 (329)
|..+.|++|++.+.+|+|||+||+......|..+.+++|+|||+||++|.+...... ...+.....+.++|+.+.+...
T Consensus 3 p~~l~v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-~~~~~~~~~~vi~Wl~~~L~~~ 81 (259)
T PF12740_consen 3 PKPLLVYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-DTDEVASAAEVIDWLAKGLESK 81 (259)
T ss_pred CCCeEEEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC-cchhHHHHHHHHHHHHhcchhh
Confidence 567889999999999999999999988888999999999999999999977765555 6667888999999999988777
Q ss_pred cCCCccCCCcceEEEEeChHHHHHHHHHHhc-------cccEEEEeccCCCCCCCCCCCCccccc--CccCCCCCeEEEe
Q 020199 130 LPENTEANVSLVAVMGHSRGGQTAFALSLRY-------GFGAVIGLDPVAGTSKTTGLDPSILSF--DSFDFSIPVTVIG 200 (329)
Q Consensus 130 ~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~-------~v~~~v~~~p~~~~~~~~~~~~~~~~~--~~~~i~~P~Lii~ 200 (329)
++...++|.++|+++|||.||.+++.++..+ .+++++++||+++........|.++.+ .+++..+|+|+|.
T Consensus 82 l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~~~P~lviG 161 (259)
T PF12740_consen 82 LPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDFSMPALVIG 161 (259)
T ss_pred ccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCcccccCCCCCeEEEe
Confidence 7766778999999999999999999998886 299999999999988888888888777 4447789999999
Q ss_pred cCCCCCc--ccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhh
Q 020199 201 TGLGGVA--RCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVS 278 (329)
Q Consensus 201 ~~~G~~D--~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (329)
++.|+.. .++|+|.|+..++.+||..+..+. +.++.+++||++|+|....+..+..+..++|+.|..+++.+++++.
T Consensus 162 tGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~-~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~ 240 (259)
T PF12740_consen 162 TGLGGEPRNPLFPPCAPAGVNYREFFDECKPPS-WHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVG 240 (259)
T ss_pred cccCcccccccCCCCCCCCCCHHHHHHhcCCCE-EEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHH
Confidence 9987765 378999999999999999999999 9999999999999999866665533466899998669999999999
Q ss_pred HHHHHHHHHHHcCChHHH
Q 020199 279 GIVVAFLKDFFYGDAEDF 296 (329)
Q Consensus 279 ~~~~~fl~~~L~~~~~~~ 296 (329)
+++++||+.+|+++.+.+
T Consensus 241 g~~vAfl~~~l~g~~~~~ 258 (259)
T PF12740_consen 241 GIMVAFLNAQLQGDPDDL 258 (259)
T ss_pred HHHHHHHHHHhcCchhhc
Confidence 999999999999997653
No 4
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=4.4e-21 Score=176.99 Aligned_cols=214 Identities=15% Similarity=0.127 Sum_probs=148.1
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChHH-HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHH
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKS-YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQG 125 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~ 125 (329)
+|..+....|.|......|+|||+||++++... |..++..|+++||.|+++|+||+|.+........+....++++...
T Consensus 70 ~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~ 149 (349)
T PLN02385 70 RGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEH 149 (349)
T ss_pred CCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHH
Confidence 588899999999765567999999999988654 5789999999999999999999998873222234555666666555
Q ss_pred hhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCC--------------------------C
Q 020199 126 LQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSK--------------------------T 177 (329)
Q Consensus 126 ~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~--------------------------~ 177 (329)
++.+.. ....+..++.++||||||.+++.++..+| ++++|+++|...... .
T Consensus 150 l~~l~~-~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 228 (349)
T PLN02385 150 YSKIKG-NPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQ 228 (349)
T ss_pred HHHHHh-ccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCC
Confidence 544311 11123457999999999999999999988 899998887432100 0
Q ss_pred CC-----CC-----------Ccccc------------------cCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHH
Q 020199 178 TG-----LD-----------PSILS------------------FDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEE 222 (329)
Q Consensus 178 ~~-----~~-----------~~~~~------------------~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~ 222 (329)
.. .. ...+. ...+ ++++|+|+++ |+.|.++|+. ....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~---G~~D~vv~~~-----~~~~ 300 (349)
T PLN02385 229 KDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILH---GEADKVTDPS-----VSKF 300 (349)
T ss_pred CccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEE---eCCCCccChH-----HHHH
Confidence 00 00 00000 0123 7899999999 8889988743 2234
Q ss_pred HHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHc
Q 020199 223 FFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 223 ~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~ 290 (329)
.++++..+.+.+.+++++||+.+.+ .++...+.+...+.+||+.++.
T Consensus 301 l~~~~~~~~~~l~~i~~~gH~l~~e---------------------~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 301 LYEKASSSDKKLKLYEDAYHSILEG---------------------EPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHcCCCCceEEEeCCCeeecccC---------------------CChhhHHHHHHHHHHHHHHhcc
Confidence 4566654444899999999975543 2334445677789999998764
No 5
>PHA02857 monoglyceride lipase; Provisional
Probab=99.88 E-value=5e-21 Score=170.72 Aligned_cols=207 Identities=13% Similarity=0.136 Sum_probs=145.3
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHh
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 126 (329)
+|..+.+.+|.|. ....++|+++||++++...|..+++.|+++||.|+++|+||+|.+........+....++++.+.+
T Consensus 9 ~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l 87 (276)
T PHA02857 9 DNDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHV 87 (276)
T ss_pred CCCEEEEEeccCC-CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHH
Confidence 4889999999886 345688999999999999999999999999999999999999988632222334444444444444
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCC----------------CC---------
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKT----------------TG--------- 179 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~----------------~~--------- 179 (329)
..... .....+++++|||+||.+++.++..+| ++++|+++|....... ..
T Consensus 88 ~~~~~---~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (276)
T PHA02857 88 VTIKS---TYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPES 164 (276)
T ss_pred HHHHh---hCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhh
Confidence 32211 113457999999999999999998888 8999999885432100 00
Q ss_pred ------------CCCcc-----cc-------------cCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHcc
Q 020199 180 ------------LDPSI-----LS-------------FDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCK 228 (329)
Q Consensus 180 ------------~~~~~-----~~-------------~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~ 228 (329)
..+.. .. ...+ ++++|+|+++ |+.|.++|+. ...++.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~---G~~D~i~~~~-----~~~~l~~~~~ 236 (276)
T PHA02857 165 VSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQ---GTNNEISDVS-----GAYYFMQHAN 236 (276)
T ss_pred ccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEe---cCCCCcCChH-----HHHHHHHHcc
Confidence 00000 00 0223 7899999999 8889998744 2333445554
Q ss_pred CCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHH
Q 020199 229 NSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDF 288 (329)
Q Consensus 229 ~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 288 (329)
... .+.+++++||+.+.| ....++.+...+.+||+..
T Consensus 237 ~~~-~~~~~~~~gH~~~~e----------------------~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 237 CNR-EIKIYEGAKHHLHKE----------------------TDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCc-eEEEeCCCcccccCC----------------------chhHHHHHHHHHHHHHHHh
Confidence 444 899999999965532 3345577778899999875
No 6
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.88 E-value=1.6e-21 Score=173.62 Aligned_cols=253 Identities=19% Similarity=0.238 Sum_probs=184.5
Q ss_pred CCCCcCCCCceeE-EEEeecCCCCCCCCCeeEEEEecCCC-C-----CccEEEEECCCCCChHHHHHHHHHHHhCCcEEE
Q 020199 23 TLPVFTRGIYSTK-RITLETSSPSSPPPPKPLIIVTPAGK-G-----TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVV 95 (329)
Q Consensus 23 ~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~l~~P~~~-~-----~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv 95 (329)
..+...++.+.+. ...+++.+ ..|++++.+.+|.|... + +.|+|++.||.|+....|.+++++|++.||+|.
T Consensus 24 ~~~~~~pg~~g~~~~~~i~~~~-~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va 102 (365)
T COG4188 24 DADLRQPGPEGVALFVTITLND-PQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVA 102 (365)
T ss_pred ChhhhcccccCcceEEEEeccC-cccCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEE
Confidence 3455677877777 66666665 33789999999999843 3 689999999999999999999999999999999
Q ss_pred EecCCCCCCCCC-----C---------ccccchHHHHHHHHHHHhhhhcC-CCccCCCcceEEEEeChHHHHHHHHHHhc
Q 020199 96 APQLYTSIPPPS-----A---------TNELNSAAEVAEWLPQGLQQNLP-ENTEANVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 96 ~~d~~g~~~~~~-----~---------~~~~~~~~~~~~~l~~~~~~~~~-~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
+++|+|...-.. . .....++..+++++.+. .+- + ..+++|..+|+++|||+||++++.+++..
T Consensus 103 ~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~-~~s-P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 103 APDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL-TAS-PALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred eccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh-hcC-cccccccCccceEEEecccccHHHHHhcccc
Confidence 999999633221 1 12344677777777765 222 4 46788999999999999999999998765
Q ss_pred c----------------------------------------------ccEEEEeccCCCCCCCCCCCCcccccCcc-CCC
Q 020199 161 G----------------------------------------------FGAVIGLDPVAGTSKTTGLDPSILSFDSF-DFS 193 (329)
Q Consensus 161 ~----------------------------------------------v~~~v~~~p~~~~~~~~~~~~~~~~~~~~-~i~ 193 (329)
. +++++.++|..++.. ....+ .++
T Consensus 181 ~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~F---------g~tgl~~v~ 251 (365)
T COG4188 181 LDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIF---------GTTGLVKVT 251 (365)
T ss_pred ccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccceeeeeccCCccccc---------ccccceeee
Confidence 4 344444444433221 11233 889
Q ss_pred CCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCc---------------cchhccc
Q 020199 194 IPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPS---------------DVKSWAL 258 (329)
Q Consensus 194 ~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~---------------~~~~~~~ 258 (329)
+|++++. |..|...|+. .++...+..+.+..|++.+++++.|++|++.... ...+..
T Consensus 252 ~P~~~~a---~s~D~~aP~~----~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~~~~~~~~~~~s~~l~~~~~~- 323 (365)
T COG4188 252 DPVLLAA---GSADGFAPPV----TEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEGQDIAAYTYRKSAALALAGLY- 323 (365)
T ss_pred cceeeec---ccccccCCcc----cccccccccCCcchhheeecCCCccccccccCcccchhhhhhhhhhhhccccccc-
Confidence 9999999 7778865544 3344567888888669999999999999988655 122211
Q ss_pred cccccc-CCCCCchhHHHHhhHHHHHHHHHHHcCChHHH
Q 020199 259 SKYFCK-NGNESRDPMRRCVSGIVVAFLKDFFYGDAEDF 296 (329)
Q Consensus 259 ~~~~~~-~~~~~~~~~~~~~~~~~~~fl~~~L~~~~~~~ 296 (329)
-..|. .+..++..+++.+...++.||+.+++...+..
T Consensus 324 -~~i~~~~~~~d~~~~~~~~~~~~l~f~~~~~kt~~~~~ 361 (365)
T COG4188 324 -VPICEEAGGFDRAAYAQLISTRVLPFFDVTLKTPAALF 361 (365)
T ss_pred -cccccccCcccchhHHHHHhhcccchhhhhccchhhhh
Confidence 12443 33669999999999999999999988765543
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=5.5e-21 Score=174.95 Aligned_cols=231 Identities=15% Similarity=0.132 Sum_probs=155.3
Q ss_pred CCCCceeEEEEeecCCCCCCCCCeeEEEEecCCC-CCccEEEEECCCCCChH-HHHHHHHHHHhCCcEEEEecCCCCCCC
Q 020199 28 TRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGK-GTFNVILFLHGTSLSNK-SYSKIFDHIASHGFIVVAPQLYTSIPP 105 (329)
Q Consensus 28 ~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~-~~~p~vi~~HG~~~~~~-~~~~~~~~la~~G~~Vv~~d~~g~~~~ 105 (329)
++...+.+...+...+ +..+....|.|... ...++|||+||++.+.. .|..++..|+++||.|+++|+||+|.+
T Consensus 26 ~~~~~~~~~~~~~~~d----g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 26 ALKGIKGSKSFFTSPR----GLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred hccCCccccceEEcCC----CCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCC
Confidence 3344455555566654 88899989988643 35689999999987643 467788899999999999999999988
Q ss_pred CCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCC------
Q 020199 106 PSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKT------ 177 (329)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~------ 177 (329)
........+.....+++...++.+... ...+..+++++||||||.+++.++..+| ++++|+++|.......
T Consensus 102 ~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 180 (330)
T PLN02298 102 EGLRAYVPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWP 180 (330)
T ss_pred CCccccCCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchH
Confidence 622222334555555555555443211 1123347999999999999999998887 9999998875321000
Q ss_pred --------------------CC-C---------------CCcccc------------------cCcc-CCCCCeEEEecC
Q 020199 178 --------------------TG-L---------------DPSILS------------------FDSF-DFSIPVTVIGTG 202 (329)
Q Consensus 178 --------------------~~-~---------------~~~~~~------------------~~~~-~i~~P~Lii~~~ 202 (329)
.. . ++..+. ...+ ++++|+|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~-- 258 (330)
T PLN02298 181 IPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLH-- 258 (330)
T ss_pred HHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEe--
Confidence 00 0 000000 0112 7889999999
Q ss_pred CCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHH
Q 020199 203 LGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVV 282 (329)
Q Consensus 203 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (329)
|+.|.++|+. ....+++.+..+.+.++++++++|+.+.+ .++...+.+...+.
T Consensus 259 -G~~D~ivp~~-----~~~~l~~~i~~~~~~l~~~~~a~H~~~~e---------------------~pd~~~~~~~~~i~ 311 (330)
T PLN02298 259 -GSADVVTDPD-----VSRALYEEAKSEDKTIKIYDGMMHSLLFG---------------------EPDENIEIVRRDIL 311 (330)
T ss_pred -cCCCCCCCHH-----HHHHHHHHhccCCceEEEcCCcEeeeecC---------------------CCHHHHHHHHHHHH
Confidence 8889998854 23344566655445899999999976543 23344467778899
Q ss_pred HHHHHHHcCC
Q 020199 283 AFLKDFFYGD 292 (329)
Q Consensus 283 ~fl~~~L~~~ 292 (329)
.||++++...
T Consensus 312 ~fl~~~~~~~ 321 (330)
T PLN02298 312 SWLNERCTGK 321 (330)
T ss_pred HHHHHhccCC
Confidence 9999987654
No 8
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.85 E-value=7.7e-21 Score=175.48 Aligned_cols=204 Identities=25% Similarity=0.331 Sum_probs=115.2
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCC----Cc-------------c--c--c------c-
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPS----AT-------------N--E--L------N- 113 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~----~~-------------~--~--~------~- 113 (329)
+++|+|||+||++++...|..++..||++||+|+++|||..+.... .. . . . .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 5689999999999999999999999999999999999986532210 00 0 0 0 0
Q ss_pred -------------hHHHHHHHHHHHhhh------hc-------CCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEE
Q 020199 114 -------------SAAEVAEWLPQGLQQ------NL-------PENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVI 166 (329)
Q Consensus 114 -------------~~~~~~~~l~~~~~~------~~-------~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v 166 (329)
++..+++.+.+ +.. .+ ...+.+|.++|+++|||+||.+++.++.... +++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~-i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEE-INSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 01111222211 000 00 1135678999999999999999999887665 99999
Q ss_pred EeccCCCCCCCCCCCCcccccCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHH--Hc--cCCCeeEEEeccCC
Q 020199 167 GLDPVAGTSKTTGLDPSILSFDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFN--RC--KNSSRAHFVATDYG 241 (329)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~--~~--~~~~k~~~~~~~~g 241 (329)
.+|||..+-.. +.. .++.|+|+|+++.- ....+... +. ......++.++|..
T Consensus 257 ~LD~W~~Pl~~----------~~~~~i~~P~L~InSe~f-------------~~~~~~~~~~~~~~~~~~~~~~ti~gt~ 313 (379)
T PF03403_consen 257 LLDPWMFPLGD----------EIYSKIPQPLLFINSESF-------------QWWENIFRMKKVISNNKESRMLTIKGTA 313 (379)
T ss_dssp EES---TTS-G----------GGGGG--S-EEEEEETTT---------------HHHHHHHHTT--TTS-EEEEEETT--
T ss_pred EeCCcccCCCc----------ccccCCCCCEEEEECccc-------------CChhhHHHHHHHhccCCCcEEEEECCCc
Confidence 99998753211 111 67899999996651 01111111 11 12334789999999
Q ss_pred cccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcC
Q 020199 242 HMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYG 291 (329)
Q Consensus 242 H~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~ 291 (329)
|..+.|-..-. .+.+.+.+...|..++..+.++.++.+++||++||.-
T Consensus 314 H~s~sD~~ll~--P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 314 HLSFSDFPLLS--PWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp GGGGSGGGGTS---HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCCcchhhhhh--HHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 99998875221 1111222334567799999999999999999999883
No 9
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.85 E-value=1.1e-19 Score=157.01 Aligned_cols=225 Identities=15% Similarity=0.147 Sum_probs=164.6
Q ss_pred CCceeEEEEeecCCCCCCCCCeeEEEEecCC-CCCccEEEEECCCCCCh-HHHHHHHHHHHhCCcEEEEecCCCCCCCCC
Q 020199 30 GIYSTKRITLETSSPSSPPPPKPLIIVTPAG-KGTFNVILFLHGTSLSN-KSYSKIFDHIASHGFIVVAPQLYTSIPPPS 107 (329)
Q Consensus 30 ~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~-~~~~p~vi~~HG~~~~~-~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~ 107 (329)
+.......-+++. |+..+....|.|.. .....+|+++||+++.. ..|..++..|+..||.|+++|++|+|.|++
T Consensus 23 ~~~~~~~~~~~n~----rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdG 98 (313)
T KOG1455|consen 23 GGVTYSESFFTNP----RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDG 98 (313)
T ss_pred CccceeeeeEEcC----CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCC
Confidence 3344444444555 59999999999975 36678999999999976 678999999999999999999999999997
Q ss_pred CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCC----------
Q 020199 108 ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTS---------- 175 (329)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~---------- 175 (329)
...-+.+...+++++..+.+....... ...-...++||||||.+++.++.++| ..++|++.|.-...
T Consensus 99 l~~yi~~~d~~v~D~~~~~~~i~~~~e-~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~ 177 (313)
T KOG1455|consen 99 LHAYVPSFDLVVDDVISFFDSIKEREE-NKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVI 177 (313)
T ss_pred CcccCCcHHHHHHHHHHHHHHHhhccc-cCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHH
Confidence 677778888888888777664332221 12346899999999999999999888 66666666542220
Q ss_pred ------------------C--------------CCCCCCccccc------------------Ccc-CCCCCeEEEecCCC
Q 020199 176 ------------------K--------------TTGLDPSILSF------------------DSF-DFSIPVTVIGTGLG 204 (329)
Q Consensus 176 ------------------~--------------~~~~~~~~~~~------------------~~~-~i~~P~Lii~~~~G 204 (329)
. ....+|..+.. +.+ .+++|.|++| |
T Consensus 178 ~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilH---G 254 (313)
T KOG1455|consen 178 SILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILH---G 254 (313)
T ss_pred HHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEe---c
Confidence 0 00111111100 444 8999999999 8
Q ss_pred CCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHH
Q 020199 205 GVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAF 284 (329)
Q Consensus 205 ~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 284 (329)
+.|.++.|. --.++++.+.+..|.+.++||.=|..+.- ..++..+.+-.-|++|
T Consensus 255 ~dD~VTDp~-----~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~g---------------------E~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 255 TDDKVTDPK-----VSKELYEKASSSDKTLKLYPGMWHSLLSG---------------------EPDENVEIVFGDIISW 308 (313)
T ss_pred CCCcccCcH-----HHHHHHHhccCCCCceeccccHHHHhhcC---------------------CCchhHHHHHHHHHHH
Confidence 889997765 34567899999998999999999943321 2444557788889999
Q ss_pred HHHH
Q 020199 285 LKDF 288 (329)
Q Consensus 285 l~~~ 288 (329)
|+..
T Consensus 309 l~~r 312 (313)
T KOG1455|consen 309 LDER 312 (313)
T ss_pred HHhc
Confidence 9863
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=5.9e-20 Score=162.66 Aligned_cols=178 Identities=13% Similarity=0.161 Sum_probs=132.0
Q ss_pred CCCCeeEEEEecC--CCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCC-CCCCCCc------cccchHHH
Q 020199 47 PPPPKPLIIVTPA--GKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTS-IPPPSAT------NELNSAAE 117 (329)
Q Consensus 47 ~~~~~~~~l~~P~--~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~-~~~~~~~------~~~~~~~~ 117 (329)
++..+.+++..|. ...+.++||++||+++....|..+++.|+++||.|+.+|+||+ |.|++.- ....|...
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~a 97 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLT 97 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHH
Confidence 3899999999997 3456799999999999987899999999999999999999886 7775311 22346666
Q ss_pred HHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhccccEEEEeccCCCCC--------C------CCCCCC-
Q 020199 118 VAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTS--------K------TTGLDP- 182 (329)
Q Consensus 118 ~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~~--------~------~~~~~~- 182 (329)
+++|+.+ . +.++|+++||||||.+++.+|...+++++|+..|+.... . ....+.
T Consensus 98 aid~lk~----~-------~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~ 166 (307)
T PRK13604 98 VVDWLNT----R-------GINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPED 166 (307)
T ss_pred HHHHHHh----c-------CCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCcccccccc
Confidence 6777654 1 346899999999999998888776799999999887621 0 000000
Q ss_pred -----ccc------------c-c------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEe
Q 020199 183 -----SIL------------S-F------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVA 237 (329)
Q Consensus 183 -----~~~------------~-~------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 237 (329)
..+ . . +.. +++.|+|+|| |+.|.++|+. ...++++.+....+.++++
T Consensus 167 ~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIH---G~~D~lVp~~-----~s~~l~e~~~s~~kkl~~i 238 (307)
T PRK13604 167 LDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFT---ANNDSWVKQS-----EVIDLLDSIRSEQCKLYSL 238 (307)
T ss_pred cccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEE---cCCCCccCHH-----HHHHHHHHhccCCcEEEEe
Confidence 000 0 0 112 6789999999 8889998854 3345677776555599999
Q ss_pred ccCCcc
Q 020199 238 TDYGHM 243 (329)
Q Consensus 238 ~~~gH~ 243 (329)
+|++|.
T Consensus 239 ~Ga~H~ 244 (307)
T PRK13604 239 IGSSHD 244 (307)
T ss_pred CCCccc
Confidence 999994
No 11
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=8.1e-19 Score=164.66 Aligned_cols=212 Identities=13% Similarity=0.074 Sum_probs=144.2
Q ss_pred CceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCCh-HHHHHHHHHHHhCCcEEEEecCCCCCCCCCCc
Q 020199 31 IYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSN-KSYSKIFDHIASHGFIVVAPQLYTSIPPPSAT 109 (329)
Q Consensus 31 ~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~-~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~ 109 (329)
++.++..++.+.+ +..+.++++.|...++.|+||+.||+++.. +.|..+++.|+++||.|+++|+||.|.+. ..
T Consensus 165 ~~~~e~v~i~~~~----g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~-~~ 239 (414)
T PRK05077 165 PGELKELEFPIPG----GGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSS-KW 239 (414)
T ss_pred CCceEEEEEEcCC----CcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCC-CC
Confidence 4567777777764 668999999998666789999988888764 45778899999999999999999998875 22
Q ss_pred cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCC-----CCCCCC
Q 020199 110 NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSK-----TTGLDP 182 (329)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~-----~~~~~~ 182 (329)
....+.......+.+.+.. ...+|.++|+++||||||++++.+|...+ ++++|+++|....-. ....+.
T Consensus 240 ~~~~d~~~~~~avld~l~~----~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~ 315 (414)
T PRK05077 240 KLTQDSSLLHQAVLNALPN----VPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPE 315 (414)
T ss_pred CccccHHHHHHHHHHHHHh----CcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchH
Confidence 1112222222222222222 23458899999999999999999998765 899999887643100 000000
Q ss_pred -------------cc---------ccc-----Ccc--CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCee
Q 020199 183 -------------SI---------LSF-----DSF--DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRA 233 (329)
Q Consensus 183 -------------~~---------~~~-----~~~--~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~ 233 (329)
.. ..+ ..+ ++++|+|+|+ |+.|.++|+. ..+.+.....+. .
T Consensus 316 ~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~---G~~D~ivP~~------~a~~l~~~~~~~-~ 385 (414)
T PRK05077 316 MYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGY---WKNDPFSPEE------DSRLIASSSADG-K 385 (414)
T ss_pred HHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEe---cCCCCCCCHH------HHHHHHHhCCCC-e
Confidence 00 000 111 5889999999 8889998843 444556555566 7
Q ss_pred EEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHH
Q 020199 234 HFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 289 (329)
Q Consensus 234 ~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L 289 (329)
+++++++.|. + ..+.+...+..||..+|
T Consensus 386 l~~i~~~~~~---e-------------------------~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 386 LLEIPFKPVY---R-------------------------NFDKALQEISDWLEDRL 413 (414)
T ss_pred EEEccCCCcc---C-------------------------CHHHHHHHHHHHHHHHh
Confidence 8888886331 0 11567778999998876
No 12
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.83 E-value=7.9e-19 Score=163.53 Aligned_cols=209 Identities=15% Similarity=0.184 Sum_probs=142.2
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHh
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 126 (329)
++..+...+|.|......++|||+||++++...|..+++.|+++||.|+++|++|+|.+........+.....+++...+
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l 198 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFL 198 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 36788888998975556789999999999988899999999999999999999999988732222234444444444444
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc----cccEEEEeccCCCCCCC-------------------------
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY----GFGAVIGLDPVAGTSKT------------------------- 177 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~----~v~~~v~~~p~~~~~~~------------------------- 177 (329)
+.+... .+..++.++||||||.+++.++... .++++++.+|+......
T Consensus 199 ~~l~~~---~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 275 (395)
T PLN02652 199 EKIRSE---NPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANK 275 (395)
T ss_pred HHHHHh---CCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCccc
Confidence 332111 1234799999999999999876532 28899998886422100
Q ss_pred ---C-----------CCCCcccc------------------cCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHH
Q 020199 178 ---T-----------GLDPSILS------------------FDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFF 224 (329)
Q Consensus 178 ---~-----------~~~~~~~~------------------~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~ 224 (329)
. ..++..+. ...+ ++++|+|+++ |+.|.++|+. ...+.+
T Consensus 276 ~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~---G~~D~vvp~~-----~a~~l~ 347 (395)
T PLN02652 276 RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLH---GTADRVTDPL-----ASQDLY 347 (395)
T ss_pred ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEE---eCCCCCCCHH-----HHHHHH
Confidence 0 00010000 0122 6899999999 8889998743 234456
Q ss_pred HHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHc
Q 020199 225 NRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 225 ~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~ 290 (329)
++.....+.+.++++++|..+.+.. .+.+...+..||+.++.
T Consensus 348 ~~~~~~~k~l~~~~ga~H~l~~e~~------------------------~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 348 NEAASRHKDIKLYDGFLHDLLFEPE------------------------REEVGRDIIDWMEKRLD 389 (395)
T ss_pred HhcCCCCceEEEECCCeEEeccCCC------------------------HHHHHHHHHHHHHHHhh
Confidence 6666555589999999996554211 24566678899998775
No 13
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.83 E-value=2.6e-18 Score=154.28 Aligned_cols=211 Identities=21% Similarity=0.272 Sum_probs=157.6
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCccccchHHHHHHHHHHHh
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPP-SATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~-~~~~~~~~~~~~~~~l~~~~ 126 (329)
+..+....|.+..... .+||++||.+.....|..++..|+..||.|+++|+||+|.|. +......+..++.+.+...+
T Consensus 19 ~~~~~~~~~~~~~~~~-g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~ 97 (298)
T COG2267 19 GTRLRYRTWAAPEPPK-GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFV 97 (298)
T ss_pred CceEEEEeecCCCCCC-cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHH
Confidence 7788888887775543 799999999999999999999999999999999999999995 35556666777777777766
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCC------------------------CC--
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSK------------------------TT-- 178 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~------------------------~~-- 178 (329)
+..... .-..+++++||||||.+++.++.+++ ++++|+.+|...... ..
T Consensus 98 ~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 174 (298)
T COG2267 98 ETIAEP---DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNL 174 (298)
T ss_pred HHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCccc
Confidence 554221 12468999999999999999999887 899999888655420 00
Q ss_pred --CC-----------------CCcc-ccc-------------C------ccCCCCCeEEEecCCCCCcccCccCCCCCCC
Q 020199 179 --GL-----------------DPSI-LSF-------------D------SFDFSIPVTVIGTGLGGVARCITACAPEGAN 219 (329)
Q Consensus 179 --~~-----------------~~~~-~~~-------------~------~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~ 219 (329)
.. +|.+ ... . ..++++|+|+++ |+.|.+++- ...
T Consensus 175 ~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~---g~~D~vv~~----~~~ 247 (298)
T COG2267 175 LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQ---GGDDRVVDN----VEG 247 (298)
T ss_pred ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEe---cCCCccccC----cHH
Confidence 00 0000 000 2 227899999999 777998762 124
Q ss_pred HHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcC
Q 020199 220 HEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYG 291 (329)
Q Consensus 220 ~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~ 291 (329)
..++++++..+.+.+.+++|+.|-.+. +.+..++.+.+.+.+||+.++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~He~~~----------------------E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 248 LARFFERAGSPDKELKVIPGAYHELLN----------------------EPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred HHHHHHhcCCCCceEEecCCcchhhhc----------------------CcchHHHHHHHHHHHHHHhhccC
Confidence 667888888887799999999995443 34444477888899999987643
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=5.4e-19 Score=159.10 Aligned_cols=99 Identities=15% Similarity=0.057 Sum_probs=85.2
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc-------ccchHHHHHHHHHHHhhhhcCCCccC
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN-------ELNSAAEVAEWLPQGLQQNLPENTEA 136 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~ 136 (329)
.|+|||+||++++...|..+...|+++ |.|+++|+||+|.+. .+. ...+..+..+.+...++++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~-~~~~~~~~~~~~~~~~~~a~~l~~~l~~l------- 99 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSD-KPNPRSAPPNSFYTFETWGEQLNDFCSDV------- 99 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCC-CCccccccccccCCHHHHHHHHHHHHHHh-------
Confidence 479999999999999999999999887 799999999999987 432 2356777788887777766
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
..+++.++||||||.+++.+|.++| +++++++++.
T Consensus 100 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~ 136 (294)
T PLN02824 100 VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS 136 (294)
T ss_pred cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCC
Confidence 5678999999999999999999998 9999998864
No 15
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.82 E-value=2.2e-19 Score=148.01 Aligned_cols=185 Identities=19% Similarity=0.255 Sum_probs=130.7
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
..|+++||+.|+..+.+.++++|.++||.|.+|.++|+|... ...-.....+....+.+..+++.+. ..+.|.++
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~-e~fl~t~~~DW~~~v~d~Y~~L~~~----gy~eI~v~ 90 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLP-EDFLKTTPRDWWEDVEDGYRDLKEA----GYDEIAVV 90 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCH-HHHhcCCHHHHHHHHHHHHHHHHHc----CCCeEEEE
Confidence 799999999999999999999999999999999999998764 2111112222222222222222111 56889999
Q ss_pred EeChHHHHHHHHHHhccccEEEEeccCCCCCC-C----------------CCC------------C--Cc--cccc----
Q 020199 145 GHSRGGQTAFALSLRYGFGAVIGLDPVAGTSK-T----------------TGL------------D--PS--ILSF---- 187 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~~~-~----------------~~~------------~--~~--~~~~---- 187 (329)
|.||||..++.+|..+|+++++.+++...... . ... . +. +...
T Consensus 91 GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i 170 (243)
T COG1647 91 GLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI 170 (243)
T ss_pred eecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 99999999999999999999998886554310 0 000 0 00 0000
Q ss_pred ----Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhccccccc
Q 020199 188 ----DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYF 262 (329)
Q Consensus 188 ----~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~ 262 (329)
.++ .|.+|++++. |..|.++|.. .....++......|++.++++.||....|
T Consensus 171 ~~~~~~~~~I~~pt~vvq---~~~D~mv~~~-----sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D--------------- 227 (243)
T COG1647 171 KDARRSLDKIYSPTLVVQ---GRQDEMVPAE-----SANFIYDHVESDDKELKWLEGSGHVITLD--------------- 227 (243)
T ss_pred HHHHhhhhhcccchhhee---cccCCCCCHH-----HHHHHHHhccCCcceeEEEccCCceeecc---------------
Confidence 445 8899999999 7779998744 34456788888888999999999953322
Q ss_pred ccCCCCCchhHHHHhhHHHHHHHH
Q 020199 263 CKNGNESRDPMRRCVSGIVVAFLK 286 (329)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~fl~ 286 (329)
.-++.+.+-+..||+
T Consensus 228 ---------~Erd~v~e~V~~FL~ 242 (243)
T COG1647 228 ---------KERDQVEEDVITFLE 242 (243)
T ss_pred ---------hhHHHHHHHHHHHhh
Confidence 233567777888886
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=99.82 E-value=2.5e-18 Score=157.44 Aligned_cols=119 Identities=15% Similarity=0.100 Sum_probs=92.8
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc------ccchHHHHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN------ELNSAAEVAEW 121 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~------~~~~~~~~~~~ 121 (329)
+..+....+.|. ...++||++||++++...|..++..|++.||.|+++|+||+|.|. ... ...+....+++
T Consensus 40 g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~-~~~~~~~~~~~~~~~~~~~d 116 (330)
T PRK10749 40 DIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSG-RLLDDPHRGHVERFNDYVDD 116 (330)
T ss_pred CCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-CCCCCCCcCccccHHHHHHH
Confidence 667887777765 235789999999999989999999999999999999999999886 321 12355666666
Q ss_pred HHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 122 LPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 122 l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
+...++.+.. ..+..++.++||||||.+++.++..+| ++++|+++|..
T Consensus 117 ~~~~~~~~~~---~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 117 LAAFWQQEIQ---PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHHh---cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 6665544321 114578999999999999999999887 89999988753
No 17
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.82 E-value=2e-18 Score=156.13 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=85.3
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc--ccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN--ELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
..|+|||+||++++...|..++..|++.||.|+++|+||+|.+. .+. ...+..+..+++.+.++++ +.++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~-~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~ 116 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSD-KPTRREDYTYARHVEWMRSWFEQL-------DLTD 116 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCC-CCCCcccCCHHHHHHHHHHHHHHc-------CCCC
Confidence 46899999999999999999999999889999999999999986 432 2245677777887777665 6678
Q ss_pred eEEEEeChHHHHHHHHHHhcc--ccEEEEecc
Q 020199 141 VAVMGHSRGGQTAFALSLRYG--FGAVIGLDP 170 (329)
Q Consensus 141 i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p 170 (329)
+.++||||||.+++.++..+| +++++++++
T Consensus 117 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 117 VTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred EEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 999999999999999999987 888888875
No 18
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.81 E-value=6.4e-19 Score=151.84 Aligned_cols=206 Identities=19% Similarity=0.220 Sum_probs=125.2
Q ss_pred eeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCC--CCCCccc-cch--------HHHHH
Q 020199 51 KPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIP--PPSATNE-LNS--------AAEVA 119 (329)
Q Consensus 51 ~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~--~~~~~~~-~~~--------~~~~~ 119 (329)
+++++..|...++.|.||++|++.|-......+++.||+.||.|++||+++... .. .... ... .+...
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPS-DPEEAFAAMRELFAPRPEQVA 79 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CC-CHHCHHHHHHHCHHHSHHHHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCcc-chhhHHHHHHHHHhhhHHHHH
Confidence 468999999777899999999999988888899999999999999999977655 22 1111 111 11223
Q ss_pred HHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCCCCCCCCCCcccccCccCCCCCeEE
Q 020199 120 EWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTV 198 (329)
Q Consensus 120 ~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~P~Li 198 (329)
+++...++.+ .....++.++|+++|+|+||.+++.++...+ +++++...|...... ......++++|+|+
T Consensus 80 ~~~~aa~~~l-~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~--------~~~~~~~~~~P~l~ 150 (218)
T PF01738_consen 80 ADLQAAVDYL-RAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPP--------PLEDAPKIKAPVLI 150 (218)
T ss_dssp HHHHHHHHHH-HCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGG--------HHHHGGG--S-EEE
T ss_pred HHHHHHHHHH-HhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCc--------chhhhcccCCCEee
Confidence 3332223222 2223356789999999999999999999885 999999988211100 00011278999999
Q ss_pred EecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhh
Q 020199 199 IGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVS 278 (329)
Q Consensus 199 i~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (329)
++ |+.|..+++.... ...+.+....... ++.+++|++|.-+.... ........+...
T Consensus 151 ~~---g~~D~~~~~~~~~--~~~~~l~~~~~~~-~~~~y~ga~HgF~~~~~-----------------~~~~~~aa~~a~ 207 (218)
T PF01738_consen 151 LF---GENDPFFPPEEVE--ALEEALKAAGVDV-EVHVYPGAGHGFANPSR-----------------PPYDPAAAEDAW 207 (218)
T ss_dssp EE---ETT-TTS-HHHHH--HHHHHHHCTTTTE-EEEEETT--TTTTSTTS-----------------TT--HHHHHHHH
T ss_pred cC---ccCCCCCChHHHH--HHHHHHHhcCCcE-EEEECCCCcccccCCCC-----------------cccCHHHHHHHH
Confidence 99 7779887744211 1122233334444 89999999994322211 123455667788
Q ss_pred HHHHHHHHHHH
Q 020199 279 GIVVAFLKDFF 289 (329)
Q Consensus 279 ~~~~~fl~~~L 289 (329)
..+++||++||
T Consensus 208 ~~~~~ff~~~L 218 (218)
T PF01738_consen 208 QRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHHHhcC
Confidence 89999999886
No 19
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.80 E-value=4e-18 Score=152.06 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=83.9
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEE
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAV 143 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l 143 (329)
.++|||+||++++...|..+.+.|++ +|.|+++|+||+|.+. .+....+.....+++.+.++.+ +.+++.+
T Consensus 25 ~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~~~~~~i~~l-------~~~~~~L 95 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSS-TPRHPYRFPGLAKLAARMLDYL-------DYGQVNA 95 (276)
T ss_pred CCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCC-CCCCcCcHHHHHHHHHHHHHHh-------CcCceEE
Confidence 47899999999999999999999976 5999999999999987 4433345667777777777665 6678999
Q ss_pred EEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 144 MGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 144 ~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
+||||||.+++.+|..+| +++++++++..
T Consensus 96 vG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 96 IGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred EEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 999999999999999987 88988887643
No 20
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=8.3e-19 Score=140.73 Aligned_cols=143 Identities=22% Similarity=0.345 Sum_probs=110.0
Q ss_pred EEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEE
Q 020199 66 VILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMG 145 (329)
Q Consensus 66 ~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~G 145 (329)
+||++||++++...|..+++.|+++||.|+.+|+++.+.+. ......++++++.. .. .+.++|+++|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~------~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSD----GADAVERVLADIRA---GY------PDPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSH----HSHHHHHHHHHHHH---HH------CTCCEEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccc----hhHHHHHHHHHHHh---hc------CCCCcEEEEE
Confidence 68999999999999999999999999999999999987764 22344444444431 11 1678999999
Q ss_pred eChHHHHHHHHHHhcc-ccEEEEeccCCCCCCCCCCCCcccccCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHH
Q 020199 146 HSRGGQTAFALSLRYG-FGAVIGLDPVAGTSKTTGLDPSILSFDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEF 223 (329)
Q Consensus 146 hS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~ 223 (329)
||+||.+++.++.+++ ++++++++|+... +.+ ..++|+++++ |+.|.++++. ...+.
T Consensus 68 ~S~Gg~~a~~~~~~~~~v~~~v~~~~~~~~-------------~~~~~~~~pv~~i~---g~~D~~~~~~-----~~~~~ 126 (145)
T PF12695_consen 68 HSMGGAIAANLAARNPRVKAVVLLSPYPDS-------------EDLAKIRIPVLFIH---GENDPLVPPE-----QVRRL 126 (145)
T ss_dssp ETHHHHHHHHHHHHSTTESEEEEESESSGC-------------HHHTTTTSEEEEEE---ETT-SSSHHH-----HHHHH
T ss_pred EccCcHHHHHHhhhccceeEEEEecCccch-------------hhhhccCCcEEEEE---ECCCCcCCHH-----HHHHH
Confidence 9999999999998865 9999999994210 222 6689999999 7779987643 34556
Q ss_pred HHHccCCCeeEEEeccCCcc
Q 020199 224 FNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 224 ~~~~~~~~k~~~~~~~~gH~ 243 (329)
++++..+. +++++++++|+
T Consensus 127 ~~~~~~~~-~~~~i~g~~H~ 145 (145)
T PF12695_consen 127 YEALPGPK-ELYIIPGAGHF 145 (145)
T ss_dssp HHHHCSSE-EEEEETTS-TT
T ss_pred HHHcCCCc-EEEEeCCCcCc
Confidence 77777555 99999999995
No 21
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.80 E-value=2.2e-18 Score=169.67 Aligned_cols=220 Identities=17% Similarity=0.184 Sum_probs=148.1
Q ss_pred CCCceeEEEEeecCCCCCCCCCeeEEEEecCCC---CCccEEEEECCCCCChH--HHHHHHHHHHhCCcEEEEecCCCCC
Q 020199 29 RGIYSTKRITLETSSPSSPPPPKPLIIVTPAGK---GTFNVILFLHGTSLSNK--SYSKIFDHIASHGFIVVAPQLYTSI 103 (329)
Q Consensus 29 ~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~---~~~p~vi~~HG~~~~~~--~~~~~~~~la~~G~~Vv~~d~~g~~ 103 (329)
......+..++...+ |..+.++++.|... +++|+|+++||+..... .|....+.|++.||+|+.+|+||++
T Consensus 360 ~~~~~~e~~~~~~~d----G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~ 435 (620)
T COG1506 360 VKLAEPEPVTYKSND----GETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGST 435 (620)
T ss_pred cccCCceEEEEEcCC----CCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCC
Confidence 344566666666665 88999999999743 33799999999965443 3667889999999999999999987
Q ss_pred CCCCCc-----------cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccC
Q 020199 104 PPPSAT-----------NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPV 171 (329)
Q Consensus 104 ~~~~~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~ 171 (329)
..+ .. ....++...++++ ...+.+|.++|+++|||+||+++++++...+ +++++...+.
T Consensus 436 GyG-~~F~~~~~~~~g~~~~~D~~~~~~~l--------~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~ 506 (620)
T COG1506 436 GYG-REFADAIRGDWGGVDLEDLIAAVDAL--------VKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGG 506 (620)
T ss_pred ccH-HHHHHhhhhccCCccHHHHHHHHHHH--------HhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCc
Confidence 753 11 1222333333322 2245679999999999999999999999988 7777766653
Q ss_pred CC-CCCC--------------CCCC---Cccccc-C----ccCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHcc
Q 020199 172 AG-TSKT--------------TGLD---PSILSF-D----SFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCK 228 (329)
Q Consensus 172 ~~-~~~~--------------~~~~---~~~~~~-~----~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~ 228 (329)
.. .... ...+ ...+.. . ..++++|+|+|| |+.|.-+|....+ ...+.++...
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliH---G~~D~~v~~~q~~--~~~~aL~~~g 581 (620)
T COG1506 507 VDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIH---GEEDDRVPIEQAE--QLVDALKRKG 581 (620)
T ss_pred chhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEe---ecCCccCChHHHH--HHHHHHHHcC
Confidence 22 1000 0000 000111 1 118999999999 8889877743221 2333445544
Q ss_pred CCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcC
Q 020199 229 NSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYG 291 (329)
Q Consensus 229 ~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~ 291 (329)
.+. +++++|+.+|. ..+..........++.||.++|+.
T Consensus 582 ~~~-~~~~~p~e~H~------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 582 KPV-ELVVFPDEGHG------------------------FSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred ceE-EEEEeCCCCcC------------------------CCCchhHHHHHHHHHHHHHHHhcC
Confidence 556 89999999992 123344456777899999999875
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.80 E-value=3.5e-18 Score=153.90 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=85.2
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
+.|.|||+||++++...|..++..|++.+ .|+++|++|+|.|. .+....+.....+++...++++ +.+++.
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~-~~~~~~~~~~~a~dl~~ll~~l-------~~~~~~ 96 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASD-KPDIDYTFADHARYLDAWFDAL-------GLDDVV 96 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-------CCCCeE
Confidence 45899999999999999999999999985 99999999999987 4433346677777777777666 567899
Q ss_pred EEEeChHHHHHHHHHHhcc--ccEEEEecc
Q 020199 143 VMGHSRGGQTAFALSLRYG--FGAVIGLDP 170 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~--v~~~v~~~p 170 (329)
++|||+||.+++.++..+| +++++++++
T Consensus 97 lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 97 LVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred EEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 9999999999999999998 899998886
No 23
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.79 E-value=4.7e-18 Score=149.43 Aligned_cols=172 Identities=16% Similarity=0.182 Sum_probs=122.5
Q ss_pred EEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCc
Q 020199 55 IVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENT 134 (329)
Q Consensus 55 l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 134 (329)
.+.|..+...|+|||+||++++...|..++..|++ +|.|+++|+||+|.+. ... ..+..+..+++...++++
T Consensus 7 ~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~-~~~-~~~~~~~~~d~~~~l~~l----- 78 (255)
T PRK10673 7 AQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSP-RDP-VMNYPAMAQDLLDTLDAL----- 78 (255)
T ss_pred eccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCC-CCC-CCCHHHHHHHHHHHHHHc-----
Confidence 33455556779999999999999999999999976 5999999999999886 433 245667777777777665
Q ss_pred cCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCC-------------------C----------CCCCC-
Q 020199 135 EANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSK-------------------T----------TGLDP- 182 (329)
Q Consensus 135 ~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~-------------------~----------~~~~~- 182 (329)
+.+++.++||||||.+++.++..++ |++++++++...... . .....
T Consensus 79 --~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PRK10673 79 --QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEE 156 (255)
T ss_pred --CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCH
Confidence 5578999999999999999999887 899988763211000 0 00000
Q ss_pred ------------ccc---------------ccCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeE
Q 020199 183 ------------SIL---------------SFDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAH 234 (329)
Q Consensus 183 ------------~~~---------------~~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~ 234 (329)
..+ ....+ .+++|+|+|+ |+.|..+++ ...+.+....... .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~---G~~D~~~~~------~~~~~~~~~~~~~-~~ 226 (255)
T PRK10673 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIR---GGNSPYVTE------AYRDDLLAQFPQA-RA 226 (255)
T ss_pred HHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEE---CCCCCCCCH------HHHHHHHHhCCCc-EE
Confidence 000 00112 5679999999 888987653 2444455555666 88
Q ss_pred EEeccCCccccc
Q 020199 235 FVATDYGHMDIL 246 (329)
Q Consensus 235 ~~~~~~gH~~~~ 246 (329)
.+++++||+.+.
T Consensus 227 ~~~~~~gH~~~~ 238 (255)
T PRK10673 227 HVIAGAGHWVHA 238 (255)
T ss_pred EEeCCCCCeeec
Confidence 999999997554
No 24
>PLN02965 Probable pheophorbidase
Probab=99.79 E-value=6.3e-18 Score=149.08 Aligned_cols=167 Identities=16% Similarity=0.198 Sum_probs=122.3
Q ss_pred EEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCC-cceEEE
Q 020199 66 VILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANV-SLVAVM 144 (329)
Q Consensus 66 ~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~i~l~ 144 (329)
.|||+||++.+...|..+...|++.||.|+++|+||+|.+........+..+..+++.+.++++ +. .++.++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~~~lv 77 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL-------PPDHKVILV 77 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc-------CCCCCEEEE
Confidence 4999999999999999999999888999999999999988622223455777888888877765 44 489999
Q ss_pred EeChHHHHHHHHHHhcc--ccEEEEeccCC---CCC---C----------C------CC--CC-------Cccc-----c
Q 020199 145 GHSRGGQTAFALSLRYG--FGAVIGLDPVA---GTS---K----------T------TG--LD-------PSIL-----S 186 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~--v~~~v~~~p~~---~~~---~----------~------~~--~~-------~~~~-----~ 186 (329)
||||||.+++.++.++| |+++|++++.. ... . . .. .. .... .
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYN 157 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhc
Confidence 99999999999999887 88888877541 100 0 0 00 00 0000 0
Q ss_pred ---------------c-------------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEe
Q 020199 187 ---------------F-------------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVA 237 (329)
Q Consensus 187 ---------------~-------------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 237 (329)
. ..+ .+++|+|+++ |+.|.++|+. ..+.+.+...+. +++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~---g~~D~~~~~~------~~~~~~~~~~~a-~~~~i 227 (255)
T PLN02965 158 QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIK---TAKDNLFDPV------RQDVMVENWPPA-QTYVL 227 (255)
T ss_pred CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEE---cCCCCCCCHH------HHHHHHHhCCcc-eEEEe
Confidence 0 011 5899999999 8889998753 445566666667 78999
Q ss_pred ccCCcccccCCC
Q 020199 238 TDYGHMDILDDN 249 (329)
Q Consensus 238 ~~~gH~~~~d~~ 249 (329)
+++||+.+.+..
T Consensus 228 ~~~GH~~~~e~p 239 (255)
T PLN02965 228 EDSDHSAFFSVP 239 (255)
T ss_pred cCCCCchhhcCH
Confidence 999998776543
No 25
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=3.1e-17 Score=142.26 Aligned_cols=212 Identities=21% Similarity=0.237 Sum_probs=145.7
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc-cc----------chH
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN-EL----------NSA 115 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~-~~----------~~~ 115 (329)
.+.++.+++.+|...+..|+||++|++.|-...+..+++.||+.||.|++||.++......... .. .+.
T Consensus 10 ~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (236)
T COG0412 10 PDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDP 89 (236)
T ss_pred CCceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCH
Confidence 3689999999999888779999999999998899999999999999999999966422210100 00 001
Q ss_pred HHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCCCCCCCCCCcccccCccCCCC
Q 020199 116 AEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSI 194 (329)
Q Consensus 116 ~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~ 194 (329)
.....++...++.+ .....++..+|+++|+||||.+++.++...+ +++.+.+.+........ ...++++
T Consensus 90 ~~~~~d~~a~~~~L-~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~---------~~~~~~~ 159 (236)
T COG0412 90 AEVLADIDAALDYL-ARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTA---------DAPKIKV 159 (236)
T ss_pred HHHHHHHHHHHHHH-HhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCccc---------ccccccC
Confidence 23333333333222 2223357889999999999999999999986 99999998866532210 1127899
Q ss_pred CeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCC--CeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchh
Q 020199 195 PVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNS--SRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDP 272 (329)
Q Consensus 195 P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (329)
|+|++. ++.|..+|..... .+.+.+... ...+.+++++.|.-+.+.. .. ...-+..
T Consensus 160 pvl~~~---~~~D~~~p~~~~~-----~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~-~~-------------~~~y~~~ 217 (236)
T COG0412 160 PVLLHL---AGEDPYIPAADVD-----ALAAALEDAGVKVDLEIYPGAGHGFANDRA-DY-------------HPGYDAA 217 (236)
T ss_pred cEEEEe---cccCCCCChhHHH-----HHHHHHHhcCCCeeEEEeCCCccccccCCC-cc-------------cccCCHH
Confidence 999999 7779887754222 222333322 2378899999995443320 00 0123555
Q ss_pred HHHHhhHHHHHHHHHHHc
Q 020199 273 MRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 273 ~~~~~~~~~~~fl~~~L~ 290 (329)
..+.....+++||+++|.
T Consensus 218 aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 218 AAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 667788899999999875
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.79 E-value=3.7e-18 Score=148.20 Aligned_cols=166 Identities=14% Similarity=0.128 Sum_probs=117.2
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
..|+|||+||++.+...|..+++.|+ .||.|+++|++|+|.+. ......+..+..+.+...++.+ +.+++.
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~i~~~-------~~~~v~ 82 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSD-APEGPYSIEDLADDVLALLDHL-------GIERAV 82 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-------CCCceE
Confidence 46899999999999999999999886 58999999999999886 4443446666677777666655 567899
Q ss_pred EEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCC-----------------------------CCC--CCcc---c-
Q 020199 143 VMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKT-----------------------------TGL--DPSI---L- 185 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~-----------------------------~~~--~~~~---~- 185 (329)
++|||+||.+++.+|..+| +++++++++....... ... .+.. +
T Consensus 83 liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (251)
T TIGR02427 83 FCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYR 162 (251)
T ss_pred EEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHH
Confidence 9999999999999999886 7777776643211000 000 0000 0
Q ss_pred ------------------c----cCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 186 ------------------S----FDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 186 ------------------~----~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
. .+.+ ++++|+++++ |+.|.++|+. ..+.+.+...+. .+++++++||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~---g~~D~~~~~~------~~~~~~~~~~~~-~~~~~~~~gH 232 (251)
T TIGR02427 163 NMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIA---GDQDGSTPPE------LVREIADLVPGA-RFAEIRGAGH 232 (251)
T ss_pred HHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEE---eccCCcCChH------HHHHHHHhCCCc-eEEEECCCCC
Confidence 0 0122 6889999999 8889987743 222233333445 7899999999
Q ss_pred ccccC
Q 020199 243 MDILD 247 (329)
Q Consensus 243 ~~~~d 247 (329)
+.+++
T Consensus 233 ~~~~~ 237 (251)
T TIGR02427 233 IPCVE 237 (251)
T ss_pred ccccc
Confidence 86654
No 27
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.78 E-value=2e-17 Score=147.66 Aligned_cols=167 Identities=17% Similarity=0.182 Sum_probs=112.9
Q ss_pred CccEEEEECCCCCChHHHHH---HHHHHHhCCcEEEEecCCCCCCCCCCcc-ccchHHHHHHHHHHHhhhhcCCCccCCC
Q 020199 63 TFNVILFLHGTSLSNKSYSK---IFDHIASHGFIVVAPQLYTSIPPPSATN-ELNSAAEVAEWLPQGLQQNLPENTEANV 138 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~---~~~~la~~G~~Vv~~d~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~ 138 (329)
+.|.|||+||++++...|.. ....|++.||.|+++|+||+|.+. ... .........+++...++.+ +.
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~l~~l-------~~ 100 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSD-AVVMDEQRGLVNARAVKGLMDAL-------DI 100 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCC-CCcCcccccchhHHHHHHHHHHc-------CC
Confidence 45789999999988766653 355677789999999999999987 321 1111113345555555554 67
Q ss_pred cceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCC------------------C------------CCCCC----
Q 020199 139 SLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSK------------------T------------TGLDP---- 182 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~------------------~------------~~~~~---- 182 (329)
++++++||||||.+++.++..+| ++++++++|...... . ....+
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLIT 180 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCc
Confidence 89999999999999999999887 899998876421000 0 00000
Q ss_pred ---------------cc----c------cc------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCC
Q 020199 183 ---------------SI----L------SF------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNS 230 (329)
Q Consensus 183 ---------------~~----~------~~------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 230 (329)
.. . .. ..+ ++++|+|+++ |+.|.++++. ..+.+.....+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~---G~~D~~v~~~------~~~~~~~~~~~ 251 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTW---GRDDRFVPLD------HGLKLLWNMPD 251 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEE---ccCCCcCCch------hHHHHHHhCCC
Confidence 00 0 00 113 7889999999 8889987743 23334444456
Q ss_pred CeeEEEeccCCcccccC
Q 020199 231 SRAHFVATDYGHMDILD 247 (329)
Q Consensus 231 ~k~~~~~~~~gH~~~~d 247 (329)
. ++++++++||+.+.+
T Consensus 252 ~-~~~~i~~agH~~~~e 267 (282)
T TIGR03343 252 A-QLHVFSRCGHWAQWE 267 (282)
T ss_pred C-EEEEeCCCCcCCccc
Confidence 6 889999999986654
No 28
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.78 E-value=1.4e-17 Score=145.56 Aligned_cols=101 Identities=22% Similarity=0.252 Sum_probs=81.9
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
+.|+|||+||++++...|..+...|.+ ||.|+++|+||+|.+........+..+..+++.+.++.. +..++.
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~~~ 83 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-------NIERFH 83 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-------CCCcEE
Confidence 468999999999999999988888865 699999999999988632233345666677777766655 567899
Q ss_pred EEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 143 VMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
++||||||.+++.++..++ ++++|+++++
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~ 114 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPERLLSLVLINAW 114 (257)
T ss_pred EEEechhHHHHHHHHHHChHHhHHheeecCC
Confidence 9999999999999998887 8888877754
No 29
>PRK10566 esterase; Provisional
Probab=99.78 E-value=1e-17 Score=147.08 Aligned_cols=188 Identities=19% Similarity=0.151 Sum_probs=112.1
Q ss_pred CeeEEEEecCCC--CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCC-c-cccc----hHHHHHHH
Q 020199 50 PKPLIIVTPAGK--GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSA-T-NELN----SAAEVAEW 121 (329)
Q Consensus 50 ~~~~~l~~P~~~--~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~-~-~~~~----~~~~~~~~ 121 (329)
.+....+.|... ++.|+||++||++++...|..+++.|+++||.|+++|+||+|.+... . .... .....++.
T Consensus 11 ~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 11 GIEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred CcceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHH
Confidence 344566777643 45799999999999988899999999999999999999998754211 1 1111 11111222
Q ss_pred HHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEec-cCCCC-------CCCCCCCCc---------
Q 020199 122 LPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLD-PVAGT-------SKTTGLDPS--------- 183 (329)
Q Consensus 122 l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~-p~~~~-------~~~~~~~~~--------- 183 (329)
+...+..+. ....++.++|+++|||+||.+++.++..++ +++.+.+. +.... .......+.
T Consensus 91 ~~~~~~~l~-~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (249)
T PRK10566 91 FPTLRAAIR-EEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIV 169 (249)
T ss_pred HHHHHHHHH-hcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHH
Confidence 222222211 123357889999999999999999998877 55544332 11000 000000000
Q ss_pred --cccc---Ccc-CC-CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCC-CeeEEEeccCCcc
Q 020199 184 --ILSF---DSF-DF-SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNS-SRAHFVATDYGHM 243 (329)
Q Consensus 184 --~~~~---~~~-~i-~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~~~~gH~ 243 (329)
...+ ..+ ++ +.|+|+++ |+.|.++|+..... ..+.+.....+ ...++++++++|.
T Consensus 170 ~~~~~~~~~~~~~~i~~~P~Lii~---G~~D~~v~~~~~~~--l~~~l~~~g~~~~~~~~~~~~~~H~ 232 (249)
T PRK10566 170 APLAEWEVTHQLEQLADRPLLLWH---GLADDVVPAAESLR--LQQALRERGLDKNLTCLWEPGVRHR 232 (249)
T ss_pred HHHhhcChhhhhhhcCCCCEEEEE---cCCCCcCCHHHHHH--HHHHHHhcCCCcceEEEecCCCCCc
Confidence 0000 112 44 68999999 88899988542221 12223332222 2367788999993
No 30
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.77 E-value=4.3e-17 Score=144.80 Aligned_cols=99 Identities=29% Similarity=0.327 Sum_probs=81.2
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccc-cchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNE-LNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
..|+|||+||++++...|..+...|++ +|.|+++|++|+|.+. .+.. ..+.....+.+...++++ +.+++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~i~~~-------~~~~~ 97 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTR-APFRFRFTLPSMAEDLSALCAAE-------GLSPD 97 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCC-CccccCCCHHHHHHHHHHHHHHc-------CCCCc
Confidence 358999999999999999999999976 5999999999999887 3332 446667777777766554 55688
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEecc
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDP 170 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p 170 (329)
+++||||||.+++.++...+ +++++++++
T Consensus 98 ~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALDGPVTPRMVVGINA 128 (278)
T ss_pred eEEEECccHHHHHHHHHhCCcccceEEEEcC
Confidence 99999999999999999887 777777764
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=9.1e-17 Score=150.59 Aligned_cols=103 Identities=22% Similarity=0.255 Sum_probs=77.6
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHH----HHHHHhhhhcCCCccCC
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAE----WLPQGLQQNLPENTEAN 137 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~d 137 (329)
+..|+|||+||++++...|...+..|+++ |.|+++|++|+|.+........+.....+ .+.+.++.+ +
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l-------~ 174 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK-------N 174 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc-------C
Confidence 35689999999999988888888889875 99999999999988622222222233333 333333333 5
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
.+++.++||||||.+++.++..+| ++++|+++|..
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 678999999999999999999988 89988887653
No 32
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=4e-17 Score=151.12 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=81.9
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCc-cccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSAT-NELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
.|+|||+||++++...|..+...|++ +|.|+++|++|+|.++ .+ ....+.....+++.+.++++ ..+++.
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~-~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~ 158 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASD-KPPGFSYTMETWAELILDFLEEV-------VQKPTV 158 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CCCCccccHHHHHHHHHHHHHHh-------cCCCeE
Confidence 48999999999999999999999976 6999999999999987 43 22345667777777777665 567999
Q ss_pred EEEeChHHHHHHHHHHh-cc--ccEEEEeccC
Q 020199 143 VMGHSRGGQTAFALSLR-YG--FGAVIGLDPV 171 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~-~~--v~~~v~~~p~ 171 (329)
++||||||.+++.++.. +| |+++|++++.
T Consensus 159 lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 159 LIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred EEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 99999999999988764 45 9999988864
No 33
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.76 E-value=1.5e-17 Score=143.31 Aligned_cols=205 Identities=21% Similarity=0.204 Sum_probs=139.5
Q ss_pred CCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCC-----C-----------------c----cccc-
Q 020199 61 KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPS-----A-----------------T----NELN- 113 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~-----~-----------------~----~~~~- 113 (329)
..++|+|||+||.|+++..|+.++..||+|||+|.+++||.++..-. . . ..+.
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 46789999999999999999999999999999999999988643210 0 0 0000
Q ss_pred --------hHHHHHHHHHHH-----hhhhcCC--------CccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccC
Q 020199 114 --------SAAEVAEWLPQG-----LQQNLPE--------NTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPV 171 (329)
Q Consensus 114 --------~~~~~~~~l~~~-----~~~~~~~--------~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~ 171 (329)
....+++.+.+. .+..++. .+.+|.+++.++|||+||.+++...+.+. +++.|++|.|
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 111122222220 0111111 45678899999999999999998877554 9999999988
Q ss_pred CCCCCCCCCCCcccccCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHH---HHHHccCC--CeeEEEeccCCcccc
Q 020199 172 AGTSKTTGLDPSILSFDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEE---FFNRCKNS--SRAHFVATDYGHMDI 245 (329)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~---~~~~~~~~--~k~~~~~~~~gH~~~ 245 (329)
..+-.. ... +++-|+|+|..++ .++.+ ..+++.++ ....+++.|+=|..|
T Consensus 275 M~Pl~~----------~~~~~arqP~~finv~~--------------fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnf 330 (399)
T KOG3847|consen 275 MFPLDQ----------LQYSQARQPTLFINVED--------------FQWNENLLVMKKIESQNEGNHVITLDGSVHQNF 330 (399)
T ss_pred ecccch----------hhhhhccCCeEEEEccc--------------ccchhHHHHHHhhhCCCccceEEEEccceeccc
Confidence 654110 111 6789999999665 12222 22333221 125778889999888
Q ss_pred cCCCC--ccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcCCh
Q 020199 246 LDDNP--SDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDA 293 (329)
Q Consensus 246 ~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~~~ 293 (329)
.|-.. +.+.+. .+...|..++.+..+...+.+++||++++.+.+
T Consensus 331 sDfpfv~p~~i~k----~f~~kg~~dpy~~~~~~~r~slaFLq~h~d~~q 376 (399)
T KOG3847|consen 331 SDFPFVTPNWIGK----VFKVKGETDPYEAMQIAIRASLAFLQKHLDLVQ 376 (399)
T ss_pred ccCccccHHHHHH----HhccCCCCChHHHHHHHHHHHHHHHHhhhhhhc
Confidence 77653 334333 344577779999999999999999999998644
No 34
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.76 E-value=4.4e-17 Score=143.61 Aligned_cols=161 Identities=19% Similarity=0.214 Sum_probs=115.3
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
|.|||+||++++...|..+...|.++ |.|+++|+||+|.+. ... ..+..+.++.+.. . ..+++.++
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~-~~~~~~~~~~l~~----~-------~~~~~~lv 79 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSR-GFG-ALSLADMAEAVLQ----Q-------APDKAIWL 79 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCC-CCC-CCCHHHHHHHHHh----c-------CCCCeEEE
Confidence 56999999999999999999999766 999999999999886 332 2344444444432 2 34789999
Q ss_pred EeChHHHHHHHHHHhcc--ccEEEEeccCCCCCC------------------------------------CCC-------
Q 020199 145 GHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSK------------------------------------TTG------- 179 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~------------------------------------~~~------- 179 (329)
||||||.+++.+|..+| +++++++++...... ...
T Consensus 80 GhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T PRK10349 80 GWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDAR 159 (256)
T ss_pred EECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHH
Confidence 99999999999999887 899988876321100 000
Q ss_pred -------C--CCc--ccc----------c-Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEE
Q 020199 180 -------L--DPS--ILS----------F-DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFV 236 (329)
Q Consensus 180 -------~--~~~--~~~----------~-~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 236 (329)
. .+. ... . ..+ ++++|+|+++ |+.|.++|+. ..+.+.+...+. ++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~---G~~D~~~~~~------~~~~~~~~i~~~-~~~~ 229 (256)
T PRK10349 160 ALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLY---GYLDGLVPRK------VVPMLDKLWPHS-ESYI 229 (256)
T ss_pred HHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEe---cCCCccCCHH------HHHHHHHhCCCC-eEEE
Confidence 0 000 000 0 123 7899999999 8889987632 344566666677 8999
Q ss_pred eccCCcccccCCC
Q 020199 237 ATDYGHMDILDDN 249 (329)
Q Consensus 237 ~~~~gH~~~~d~~ 249 (329)
++++||+.+.+..
T Consensus 230 i~~~gH~~~~e~p 242 (256)
T PRK10349 230 FAKAAHAPFISHP 242 (256)
T ss_pred eCCCCCCccccCH
Confidence 9999998777543
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.75 E-value=2.1e-16 Score=149.51 Aligned_cols=116 Identities=20% Similarity=0.267 Sum_probs=87.6
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChHHHHH-HHHHHH---hCCcEEEEecCCCCCCCCCCc-cccchHHHHHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSK-IFDHIA---SHGFIVVAPQLYTSIPPPSAT-NELNSAAEVAEWL 122 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~-~~~~la---~~G~~Vv~~d~~g~~~~~~~~-~~~~~~~~~~~~l 122 (329)
+..+.+....|.+....|+|||+||++++...|.. +...|+ +.+|.|+++|++|+|.+. .+ .......+..+.+
T Consensus 185 ~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~-~p~~~~ytl~~~a~~l 263 (481)
T PLN03087 185 NESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSP-KPADSLYTLREHLEMI 263 (481)
T ss_pred CeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCc-CCCCCcCCHHHHHHHH
Confidence 44566666677654445899999999999988874 445555 478999999999999887 33 2334555656655
Q ss_pred H-HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 123 P-QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 123 ~-~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
. ..++.+ +.+++.++||||||.+++.++..+| ++++++++|.
T Consensus 264 ~~~ll~~l-------g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 264 ERSVLERY-------KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred HHHHHHHc-------CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 3 344444 5678999999999999999999998 9999998854
No 36
>PRK10985 putative hydrolase; Provisional
Probab=99.75 E-value=1.5e-16 Score=145.28 Aligned_cols=194 Identities=16% Similarity=0.158 Sum_probs=121.2
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEe-cCCCCCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCCCCCCCCCC
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVT-PAGKGTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLYTSIPPPSA 108 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~-P~~~~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~g~~~~~~~ 108 (329)
...+.+.++..| |..+...... |....+.|+||++||++++... +..+++.|+++||.|+++|+||++.+...
T Consensus 29 ~~~~~~~~~~~d----g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~ 104 (324)
T PRK10985 29 FTPYWQRLELPD----GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNR 104 (324)
T ss_pred CCcceeEEECCC----CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccC
Confidence 344456677775 6555554322 2333457999999999886433 45688999999999999999998765311
Q ss_pred -c-----cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccCCCC----
Q 020199 109 -T-----NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPVAGT---- 174 (329)
Q Consensus 109 -~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~~~~---- 174 (329)
. ....++...++++.+. . ...++.++||||||.+++.++..++ +.+++.+++....
T Consensus 105 ~~~~~~~~~~~D~~~~i~~l~~~---~-------~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~ 174 (324)
T PRK10985 105 LHRIYHSGETEDARFFLRWLQRE---F-------GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS 174 (324)
T ss_pred CcceECCCchHHHHHHHHHHHHh---C-------CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH
Confidence 1 1123333344444331 1 3467999999999998888777653 7777777654211
Q ss_pred ---------------------------C--CCC-CCCC------------------ccccc-------------Ccc-CC
Q 020199 175 ---------------------------S--KTT-GLDP------------------SILSF-------------DSF-DF 192 (329)
Q Consensus 175 ---------------------------~--~~~-~~~~------------------~~~~~-------------~~~-~i 192 (329)
. ... ..++ ....+ ..+ ++
T Consensus 175 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i 254 (324)
T PRK10985 175 YRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQI 254 (324)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCC
Confidence 0 000 0000 00011 223 78
Q ss_pred CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCC
Q 020199 193 SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDN 249 (329)
Q Consensus 193 ~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~ 249 (329)
++|+|+|+ |+.|.++++... +.+.....+. .+.+++++||+.+++..
T Consensus 255 ~~P~lii~---g~~D~~~~~~~~------~~~~~~~~~~-~~~~~~~~GH~~~~~g~ 301 (324)
T PRK10985 255 RKPTLIIH---AKDDPFMTHEVI------PKPESLPPNV-EYQLTEHGGHVGFVGGT 301 (324)
T ss_pred CCCEEEEe---cCCCCCCChhhC------hHHHHhCCCe-EEEECCCCCceeeCCCC
Confidence 99999999 888988764321 2233344445 78899999999998753
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.75 E-value=5.7e-17 Score=140.36 Aligned_cols=98 Identities=23% Similarity=0.268 Sum_probs=79.8
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc--ccchHHHHHHH-HHHHhhhhcCCCccCCCcce
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN--ELNSAAEVAEW-LPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~--~~~~~~~~~~~-l~~~~~~~~~~~~~~d~~~i 141 (329)
|+||++||++++...|..+++.|+ .||.|+++|++|+|.+. .+. ...+..+.+++ +...++.. +.+++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 72 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQ-SPDEIERYDFEEAAQDILATLLDQL-------GIEPF 72 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCC-CCCccChhhHHHHHHHHHHHHHHHc-------CCCeE
Confidence 789999999999999999999998 89999999999999886 332 23455666666 44434333 56789
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.++|||+||.+++.++..+| +++++++++.
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 99999999999999999988 8888888764
No 38
>PLN02578 hydrolase
Probab=99.74 E-value=1.5e-16 Score=146.96 Aligned_cols=100 Identities=18% Similarity=0.115 Sum_probs=82.3
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
+.|.|||+||++++...|..+...|++ +|.|+++|++|+|.++ .+....+.....+.+.+.++++ ..+++.
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~-~~~~~~~~~~~a~~l~~~i~~~-------~~~~~~ 155 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSD-KALIEYDAMVWRDQVADFVKEV-------VKEPAV 155 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CcccccCHHHHHHHHHHHHHHh-------ccCCeE
Confidence 457799999999999999999999976 5999999999999987 4443345566666676766665 347899
Q ss_pred EEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 143 VMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
++|||+||.+++.+|.++| +++++++++.
T Consensus 156 lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 156 LVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred EEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 9999999999999999998 8999888753
No 39
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.74 E-value=8.9e-17 Score=140.22 Aligned_cols=97 Identities=21% Similarity=0.205 Sum_probs=82.1
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEE
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAV 143 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l 143 (329)
.|+|||+||++++...|..++..| + +|.|+++|+||+|.+. .+. ..+.....+++.+.++++ +.+++.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~-~~~-~~~~~~~~~~l~~~l~~~-------~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSA-AIS-VDGFADVSRLLSQTLQSY-------NILPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCC-Ccc-ccCHHHHHHHHHHHHHHc-------CCCCeEE
Confidence 478999999999999999999988 3 6999999999999987 433 346777788888877765 6689999
Q ss_pred EEeChHHHHHHHHHHhcc---ccEEEEeccC
Q 020199 144 MGHSRGGQTAFALSLRYG---FGAVIGLDPV 171 (329)
Q Consensus 144 ~GhS~GG~~a~~~a~~~~---v~~~v~~~p~ 171 (329)
+||||||.+++.++..++ +++++++++.
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 999999999999999874 8888887644
No 40
>PLN02511 hydrolase
Probab=99.74 E-value=1.1e-16 Score=149.34 Aligned_cols=196 Identities=15% Similarity=0.131 Sum_probs=124.6
Q ss_pred CceeEEEEeecCCCCCCCCCeeEEEEecC---CCCCccEEEEECCCCCChHH-H-HHHHHHHHhCCcEEEEecCCCCCCC
Q 020199 31 IYSTKRITLETSSPSSPPPPKPLIIVTPA---GKGTFNVILFLHGTSLSNKS-Y-SKIFDHIASHGFIVVAPQLYTSIPP 105 (329)
Q Consensus 31 ~~~v~~~~~~~~~~~~~~~~~~~~l~~P~---~~~~~p~vi~~HG~~~~~~~-~-~~~~~~la~~G~~Vv~~d~~g~~~~ 105 (329)
....+++.++..| |..+.+..+.+. .....|+||++||++++... | ..++..+.++||.|+++|+||+|.+
T Consensus 68 ~~~~~re~l~~~D----G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s 143 (388)
T PLN02511 68 AVRYRRECLRTPD----GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADS 143 (388)
T ss_pred CCceeEEEEECCC----CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 3456667778775 777776665432 22346899999999876543 4 5677888889999999999999887
Q ss_pred CCCcc------ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEecc-CCCC
Q 020199 106 PSATN------ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDP-VAGT 174 (329)
Q Consensus 106 ~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p-~~~~ 174 (329)
..... ...++.++++++... . ...++.++||||||.+++.++.+++ +.+++.+.+ ....
T Consensus 144 ~~~~~~~~~~~~~~Dl~~~i~~l~~~---~-------~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~ 213 (388)
T PLN02511 144 PVTTPQFYSASFTGDLRQVVDHVAGR---Y-------PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLV 213 (388)
T ss_pred CCCCcCEEcCCchHHHHHHHHHHHHH---C-------CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHH
Confidence 52111 122333333333221 1 3358999999999999999998876 667665553 2110
Q ss_pred --------------------------C-C---CC----CCC------------------Cccccc-------------Cc
Q 020199 175 --------------------------S-K---TT----GLD------------------PSILSF-------------DS 189 (329)
Q Consensus 175 --------------------------~-~---~~----~~~------------------~~~~~~-------------~~ 189 (329)
. . .. ... .....+ ..
T Consensus 214 ~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~ 293 (388)
T PLN02511 214 IADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDS 293 (388)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhh
Confidence 0 0 00 000 000011 12
Q ss_pred c-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCC
Q 020199 190 F-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDN 249 (329)
Q Consensus 190 ~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~ 249 (329)
+ +|++|+|+|+ |+.|.++|+.... ........+. .+++++++||+.+++..
T Consensus 294 L~~I~vPtLiI~---g~dDpi~p~~~~~-----~~~~~~~p~~-~l~~~~~gGH~~~~E~p 345 (388)
T PLN02511 294 IKHVRVPLLCIQ---AANDPIAPARGIP-----REDIKANPNC-LLIVTPSGGHLGWVAGP 345 (388)
T ss_pred hccCCCCeEEEE---cCCCCcCCcccCc-----HhHHhcCCCE-EEEECCCcceeccccCC
Confidence 3 7999999999 8889987754211 1122333455 89999999999998764
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.73 E-value=1.3e-16 Score=148.12 Aligned_cols=107 Identities=20% Similarity=0.192 Sum_probs=86.4
Q ss_pred EecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCcc
Q 020199 56 VTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTE 135 (329)
Q Consensus 56 ~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (329)
|++.+.++.|+|||+||++++...|..+...|++. |.|+++|++|+|.+. ......+...+.+.+...++.+
T Consensus 123 ~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~-~~~~~~~~~~~~~~~~~~~~~~------ 194 (371)
T PRK14875 123 YLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASS-KAVGAGSLDELAAAVLAFLDAL------ 194 (371)
T ss_pred EecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHhc------
Confidence 33444445689999999999999999999999765 999999999999885 3334456667777777666554
Q ss_pred CCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 136 ANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 136 ~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+..++.++|||+||.+++.+|..++ ++++++++|.
T Consensus 195 -~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 195 -GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred -CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 6678999999999999999998887 8899888865
No 42
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.73 E-value=1.7e-16 Score=142.42 Aligned_cols=100 Identities=19% Similarity=0.157 Sum_probs=80.2
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccc-cchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNE-LNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
+.|+|||+||++.....|..+...|.+ +|.|+++|++|+|.++ .+.. ..+.....+.+...++++ +.+++
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 103 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSE-RPSGFGYQIDEHARVIGEFVDHL-------GLDRY 103 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCC-CCCccccCHHHHHHHHHHHHHHh-------CCCCE
Confidence 458899999999888889999999975 4999999999999887 3322 234556666666656555 66789
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.++||||||.+++.++..+| ++++|++++.
T Consensus 104 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 104 LSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred EEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 99999999999999999887 8888877653
No 43
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.73 E-value=2.4e-17 Score=141.47 Aligned_cols=174 Identities=17% Similarity=0.218 Sum_probs=112.4
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCC-------C---ccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChH
Q 020199 80 YSKIFDHIASHGFIVVAPQLYTSIPPPS-------A---TNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRG 149 (329)
Q Consensus 80 ~~~~~~~la~~G~~Vv~~d~~g~~~~~~-------~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~G 149 (329)
|....+.|+++||+|+.+|+||++..+. . .....|....++++.+ ...+|.++|+++|||+|
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~--------~~~iD~~ri~i~G~S~G 74 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIK--------QYYIDPDRIGIMGHSYG 74 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHH--------TTSEEEEEEEEEEETHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhc--------cccccceeEEEEccccc
Confidence 4566889999999999999999875431 0 1112233333333322 22569999999999999
Q ss_pred HHHHHHHHHhcc--ccEEEEeccCCCCCCCCCCC----C-ccc-------c---c------Ccc-C--CCCCeEEEecCC
Q 020199 150 GQTAFALSLRYG--FGAVIGLDPVAGTSKTTGLD----P-SIL-------S---F------DSF-D--FSIPVTVIGTGL 203 (329)
Q Consensus 150 G~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~~~----~-~~~-------~---~------~~~-~--i~~P~Lii~~~~ 203 (329)
|++++.++..++ +++++..+|........... . ... . + ... + +++|+|+++
T Consensus 75 G~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~h--- 151 (213)
T PF00326_consen 75 GYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIH--- 151 (213)
T ss_dssp HHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEE---
T ss_pred ccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEc---
Confidence 999999999777 89999888765442211110 0 000 0 0 112 4 889999999
Q ss_pred CCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHH
Q 020199 204 GGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVA 283 (329)
Q Consensus 204 G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (329)
|+.|..+|+.... ...+.+.+...+. .+++++++||. ......+......+.+
T Consensus 152 G~~D~~Vp~~~s~--~~~~~L~~~g~~~-~~~~~p~~gH~------------------------~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 152 GENDPRVPPSQSL--RLYNALRKAGKPV-ELLIFPGEGHG------------------------FGNPENRRDWYERILD 204 (213)
T ss_dssp ETTBSSSTTHHHH--HHHHHHHHTTSSE-EEEEETT-SSS------------------------TTSHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHH--HHHHHHHhcCCCE-EEEEcCcCCCC------------------------CCCchhHHHHHHHHHH
Confidence 7789988754322 2344555556666 89999999992 1233445578889999
Q ss_pred HHHHHHcC
Q 020199 284 FLKDFFYG 291 (329)
Q Consensus 284 fl~~~L~~ 291 (329)
||+++|++
T Consensus 205 f~~~~l~~ 212 (213)
T PF00326_consen 205 FFDKYLKK 212 (213)
T ss_dssp HHHHHTT-
T ss_pred HHHHHcCC
Confidence 99999986
No 44
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.72 E-value=2.1e-16 Score=140.23 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=76.7
Q ss_pred CCccEEEEECCCCCChHH-HHHHHHHHHhCCcEEEEecCCCCCCCCCCccc---cchHHHHHHHHHHHhhhhcCCCccCC
Q 020199 62 GTFNVILFLHGTSLSNKS-YSKIFDHIASHGFIVVAPQLYTSIPPPSATNE---LNSAAEVAEWLPQGLQQNLPENTEAN 137 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~d 137 (329)
+..|+|||+||+.++... |..+...+.+.||.|+++|+||+|.+. .+.. ..+.....+++...++++ +
T Consensus 23 ~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 94 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSD-QPDDSDELWTIDYFVDELEEVREKL-------G 94 (288)
T ss_pred CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCC-CCCcccccccHHHHHHHHHHHHHHc-------C
Confidence 345889999998665544 556666666669999999999999876 3321 245666666666655554 5
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.+++.++||||||.+++.++..+| ++++++.++.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 567999999999999999999888 8888877654
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.72 E-value=2.4e-16 Score=136.41 Aligned_cols=160 Identities=14% Similarity=0.160 Sum_probs=111.5
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
|+|||+||++++...|..+++.|++ +|.|+++|++|+|.+. .. ...+..+..+.+...+ .+++.++
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~-~~-~~~~~~~~~~~~~~~~-----------~~~~~lv 70 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSR-GF-GPLSLADAAEAIAAQA-----------PDPAIWL 70 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCC-CC-CCcCHHHHHHHHHHhC-----------CCCeEEE
Confidence 7899999999999999999999975 5999999999999876 32 2234555555444321 2589999
Q ss_pred EeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCC-------------------------------------CCC---
Q 020199 145 GHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTG-------------------------------------LDP--- 182 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~-------------------------------------~~~--- 182 (329)
||||||.+++.++.++| +++++++++......... ...
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDA 150 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHH
Confidence 99999999999999888 888888765432100000 000
Q ss_pred ---------cccc-------------c----Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEE
Q 020199 183 ---------SILS-------------F----DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHF 235 (329)
Q Consensus 183 ---------~~~~-------------~----~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 235 (329)
.... . ..+ ++++|+|+++ |+.|.++|+. ..+.+.+...+. ++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~---g~~D~~~~~~------~~~~~~~~~~~~-~~~ 220 (245)
T TIGR01738 151 RALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLY---GYLDGLVPAK------VVPYLDKLAPHS-ELY 220 (245)
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEe---ecCCcccCHH------HHHHHHHhCCCC-eEE
Confidence 0000 0 112 7899999999 7789987743 233344444556 889
Q ss_pred EeccCCcccccCC
Q 020199 236 VATDYGHMDILDD 248 (329)
Q Consensus 236 ~~~~~gH~~~~d~ 248 (329)
+++++||+.+++.
T Consensus 221 ~~~~~gH~~~~e~ 233 (245)
T TIGR01738 221 IFAKAAHAPFLSH 233 (245)
T ss_pred EeCCCCCCccccC
Confidence 9999999877653
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.72 E-value=1.1e-15 Score=136.28 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=82.8
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
++.|.|||+||++.+...|..+...|++.||.|+++|++|+|.+........++.+..+.+.+.++++. ..+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~------~~~~v 89 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP------ENEKV 89 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC------CCCCE
Confidence 456899999999999999999999999999999999999998764122223566666667766665541 23689
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.++||||||.+++.++..++ ++++|.+++.
T Consensus 90 ~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 90 ILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred EEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 99999999999999998876 8888887653
No 47
>PRK06489 hypothetical protein; Provisional
Probab=99.71 E-value=5.4e-16 Score=143.66 Aligned_cols=100 Identities=19% Similarity=0.283 Sum_probs=74.3
Q ss_pred ccEEEEECCCCCChHHHH--HHHHHH-------HhCCcEEEEecCCCCCCCCCCccc-------cchHHHHHHHHHHHh-
Q 020199 64 FNVILFLHGTSLSNKSYS--KIFDHI-------ASHGFIVVAPQLYTSIPPPSATNE-------LNSAAEVAEWLPQGL- 126 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~--~~~~~l-------a~~G~~Vv~~d~~g~~~~~~~~~~-------~~~~~~~~~~l~~~~- 126 (329)
.|+|||+||++++...|. .+...| .+.+|.|+++|+||+|.+. .+.. ...+.+.++++...+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~-~p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSS-KPSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCC-CCCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 689999999999887764 455444 2467999999999999886 3321 234555555554433
Q ss_pred hhhcCCCccCCCcceE-EEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 127 QQNLPENTEANVSLVA-VMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~-l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+++ +.+++. ++||||||.+++.++.++| ++++|++++.
T Consensus 148 ~~l-------gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 148 EGL-------GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred Hhc-------CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 333 556775 8999999999999999998 8888887753
No 48
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.71 E-value=1.7e-15 Score=133.13 Aligned_cols=102 Identities=25% Similarity=0.327 Sum_probs=87.8
Q ss_pred CCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccc--cchHHHHHHHHHHHhhhhcCCCccCC
Q 020199 60 GKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNE--LNSAAEVAEWLPQGLQQNLPENTEAN 137 (329)
Q Consensus 60 ~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d 137 (329)
..+..|+|+++||+.....+|+.....|+++||.|+++|+||.|.++ .+.. ...+......+...++.+ .
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd-~P~~~~~Yt~~~l~~di~~lld~L-------g 111 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSD-APPHISEYTIDELVGDIVALLDHL-------G 111 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCC-CCCCcceeeHHHHHHHHHHHHHHh-------c
Confidence 45578999999999999999999999999999999999999999998 5443 345666666677767666 5
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc--ccEEEEec
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~ 169 (329)
.+++.++||++|+.++..+|..+| +++++.++
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~n 145 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLN 145 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChhhcceEEEec
Confidence 789999999999999999999998 88888776
No 49
>PLN02442 S-formylglutathione hydrolase
Probab=99.70 E-value=2.6e-15 Score=134.36 Aligned_cols=200 Identities=20% Similarity=0.256 Sum_probs=123.2
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEecCC--CCCccEEEEECCCCCChHHHH---HHHHHHHhCCcEEEEecCCCCCCC-
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVTPAG--KGTFNVILFLHGTSLSNKSYS---KIFDHIASHGFIVVAPQLYTSIPP- 105 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~~~~---~~~~~la~~G~~Vv~~d~~g~~~~- 105 (329)
-.+.+.++..+. -++.+.+.||.|.. .+++|+|+|+||+.++...|. .+.+.++.+||.|++||..+.+..
T Consensus 16 ~~~~~~~~~s~~---l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~ 92 (283)
T PLN02442 16 GFNRRYKHFSST---LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNV 92 (283)
T ss_pred CEEEEEEEeccc---cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCC
Confidence 344444554432 58899999999973 346899999999999877654 345677888999999997543310
Q ss_pred ----CC------Cc----cc------cchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--cc
Q 020199 106 ----PS------AT----NE------LNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FG 163 (329)
Q Consensus 106 ----~~------~~----~~------~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~ 163 (329)
.. .. .. ........+.+...++... ..+|.++++++||||||+.++.++.++| ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~---~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~ 169 (283)
T PLN02442 93 EGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF---DQLDTSRASIFGHSMGGHGALTIYLKNPDKYK 169 (283)
T ss_pred CCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH---HhcCCCceEEEEEChhHHHHHHHHHhCchhEE
Confidence 00 00 00 0101111222222222211 1237889999999999999999999988 88
Q ss_pred EEEEeccCCCCCCCCC----------CCCcccc---c----Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHH
Q 020199 164 AVIGLDPVAGTSKTTG----------LDPSILS---F----DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFN 225 (329)
Q Consensus 164 ~~v~~~p~~~~~~~~~----------~~~~~~~---~----~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~ 225 (329)
+++.++|......... .+...+. . ... +.++|+++++ |+.|.+++... ......+.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~---G~~D~~v~~~~-~s~~~~~~l~ 245 (283)
T PLN02442 170 SVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQ---GEADKFLKEQL-LPENFEEACK 245 (283)
T ss_pred EEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEE---CCCCccccccc-cHHHHHHHHH
Confidence 8888887653211000 0000000 0 111 4689999999 88898766421 0112344556
Q ss_pred HccCCCeeEEEeccCCc
Q 020199 226 RCKNSSRAHFVATDYGH 242 (329)
Q Consensus 226 ~~~~~~k~~~~~~~~gH 242 (329)
+...+. .+.++++.+|
T Consensus 246 ~~g~~~-~~~~~pg~~H 261 (283)
T PLN02442 246 EAGAPV-TLRLQPGYDH 261 (283)
T ss_pred HcCCCe-EEEEeCCCCc
Confidence 666665 8999999999
No 50
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.70 E-value=2.1e-16 Score=134.74 Aligned_cols=162 Identities=25% Similarity=0.335 Sum_probs=120.3
Q ss_pred EEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc--ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 67 ILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN--ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 67 vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
|||+||++++...|..+++.|+ +||.|+++|+||+|.+. ... ...+..+..+.+...++++ ..+++.++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSD-PPPDYSPYSIEDYAEDLAELLDAL-------GIKKVILV 71 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSS-SHSSGSGGSHHHHHHHHHHHHHHT-------TTSSEEEE
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccc-cccccCCcchhhhhhhhhhccccc-------cccccccc
Confidence 7999999999999999999995 79999999999999987 433 3456677777777777776 55789999
Q ss_pred EeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCC------------------------------CCCCc-----c---
Q 020199 145 GHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTT------------------------------GLDPS-----I--- 184 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~------------------------------~~~~~-----~--- 184 (329)
|||+||.+++.++..+| ++++++++|........ ..... +
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSS 151 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccccc
Confidence 99999999999999887 99999999877311000 00000 0
Q ss_pred -----------ccc----Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccC
Q 020199 185 -----------LSF----DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILD 247 (329)
Q Consensus 185 -----------~~~----~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d 247 (329)
... ..+ ++++|+++++ |+.|.++++ ...+.+.....+. ++++++++||+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~---g~~D~~~~~------~~~~~~~~~~~~~-~~~~~~~~gH~~~~~ 220 (228)
T PF12697_consen 152 RRALAEYLRSNLWQADLSEALPRIKVPVLVIH---GEDDPIVPP------ESAEELADKLPNA-ELVVIPGAGHFLFLE 220 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEE---ETTSSSSHH------HHHHHHHHHSTTE-EEEEETTSSSTHHHH
T ss_pred ccccccccccccccccccccccccCCCeEEee---cCCCCCCCH------HHHHHHHHHCCCC-EEEEECCCCCccHHH
Confidence 000 122 7899999999 777988762 2344454444555 899999999987765
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.70 E-value=2e-15 Score=134.63 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=81.5
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCC----CChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHH
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTS----LSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWL 122 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~----~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l 122 (329)
.+..+.+.++.|....+ +.||++||+. ++...+..+++.|+++||.|+++|++|+|.+. ... .......+++
T Consensus 10 ~~~~l~g~~~~p~~~~~-~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~-~~~--~~~~~~~~d~ 85 (274)
T TIGR03100 10 EGETLVGVLHIPGASHT-TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSE-GEN--LGFEGIDADI 85 (274)
T ss_pred CCcEEEEEEEcCCCCCC-CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCC-CCC--CCHHHHHHHH
Confidence 36779999999985443 4566556544 23344678899999999999999999999876 221 1222222222
Q ss_pred HHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCC
Q 020199 123 PQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAG 173 (329)
Q Consensus 123 ~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~ 173 (329)
...++.+..... +.++|.++|||+||.+++.++...+ ++++|+++|+..
T Consensus 86 ~~~~~~l~~~~~--g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 86 AAAIDAFREAAP--HLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHhhCC--CCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccC
Confidence 222222211100 3467999999999999999876543 999999998744
No 52
>PRK10162 acetyl esterase; Provisional
Probab=99.70 E-value=4.2e-15 Score=135.23 Aligned_cols=208 Identities=14% Similarity=0.127 Sum_probs=140.6
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCC---CChHHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCccccchHHHHHHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTS---LSNKSYSKIFDHIAS-HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLP 123 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~---~~~~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~ 123 (329)
+..+.+.+|+|... ..|+||++||++ ++...+..+++.|++ .|+.|+++|+|...... .+....+....++|+.
T Consensus 66 ~g~i~~~~y~P~~~-~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-~p~~~~D~~~a~~~l~ 143 (318)
T PRK10162 66 YGQVETRLYYPQPD-SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-FPQAIEEIVAVCCYFH 143 (318)
T ss_pred CCceEEEEECCCCC-CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC-CCCcHHHHHHHHHHHH
Confidence 44699999999743 469999999988 455667888999988 49999999999876544 4556778888899988
Q ss_pred HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc--------cccEEEEeccCCCCCCCC----------CCC----
Q 020199 124 QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY--------GFGAVIGLDPVAGTSKTT----------GLD---- 181 (329)
Q Consensus 124 ~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~--------~v~~~v~~~p~~~~~~~~----------~~~---- 181 (329)
+..+++ ++|.++|+++|+|+||.+++.++... .+++++++.|........ ...
T Consensus 144 ~~~~~~-----~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~ 218 (318)
T PRK10162 144 QHAEDY-----GINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGLTQQDL 218 (318)
T ss_pred HhHHHh-----CCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCccccCHHHH
Confidence 766554 45778999999999999999988642 278888888764321100 000
Q ss_pred ---------------Cccccc--Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 182 ---------------PSILSF--DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 182 ---------------~~~~~~--~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
...... ..+ .--.|+++++ |+.|.+.+ +...+.+.++....+. ++++++|..|.
T Consensus 219 ~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~---g~~D~L~d----e~~~~~~~L~~aGv~v-~~~~~~g~~H~ 290 (318)
T PRK10162 219 QMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAG---AEFDPLLD----DSRLLYQTLAAHQQPC-EFKLYPGTLHA 290 (318)
T ss_pred HHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEe---cCCCcCcC----hHHHHHHHHHHcCCCE-EEEEECCCcee
Confidence 000000 011 1125999999 77787643 2244556666666666 89999999993
Q ss_pred cccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHc
Q 020199 244 DILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 244 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~ 290 (329)
-+. . . . .-++. +.....+.+||+++|+
T Consensus 291 f~~----------~-------~-~-~~~~a-~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 291 FLH----------Y-------S-R-MMDTA-DDALRDGAQFFTAQLK 317 (318)
T ss_pred hhh----------c-------c-C-chHHH-HHHHHHHHHHHHHHhc
Confidence 211 0 0 0 11222 3455667899998875
No 53
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.69 E-value=1.5e-15 Score=135.52 Aligned_cols=187 Identities=17% Similarity=0.213 Sum_probs=117.6
Q ss_pred CCCCeeEEEEecCC--CCCccEEEEECCCCCChHHHHHH---HHHHHhCCcEEEEecC--CCCCCCCCC-----------
Q 020199 47 PPPPKPLIIVTPAG--KGTFNVILFLHGTSLSNKSYSKI---FDHIASHGFIVVAPQL--YTSIPPPSA----------- 108 (329)
Q Consensus 47 ~~~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~~~~~~---~~~la~~G~~Vv~~d~--~g~~~~~~~----------- 108 (329)
.+.++...||.|+. .++.|+|+++||++++...|... ...+++.||.|++||. +|.+.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 47889999999974 45689999999999988777543 2444567999999997 544322100
Q ss_pred ----c-c----ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCC
Q 020199 109 ----T-N----ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKT 177 (329)
Q Consensus 109 ----~-~----~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~ 177 (329)
. . .........+.+...+++ ...++.++++++||||||++++.++..+| ++++++++|.......
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~ 178 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAA----QFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC 178 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHh----hCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC
Confidence 0 0 001111222333333332 22357789999999999999999999988 8888888877543211
Q ss_pred CC----------CCCcccc---c----CccCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccC
Q 020199 178 TG----------LDPSILS---F----DSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDY 240 (329)
Q Consensus 178 ~~----------~~~~~~~---~----~~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 240 (329)
.. .++..+. . .......|+++.+ |+.|..++.... .....+.++....+. ++.+++|.
T Consensus 179 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~---G~~D~~v~~~~~-~~~~~~~l~~~g~~v-~~~~~~g~ 253 (275)
T TIGR02821 179 PWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQ---GTADQFLDEQLR-PDAFEQACRAAGQAL-TLRRQAGY 253 (275)
T ss_pred cchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEee---cCCCcccCcccc-HHHHHHHHHHcCCCe-EEEEeCCC
Confidence 00 0000000 0 1113457899999 878987664111 012445556665566 88899999
Q ss_pred Cc
Q 020199 241 GH 242 (329)
Q Consensus 241 gH 242 (329)
+|
T Consensus 254 ~H 255 (275)
T TIGR02821 254 DH 255 (275)
T ss_pred Cc
Confidence 99
No 54
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.69 E-value=2.3e-15 Score=139.61 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=86.5
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccc----cchHHHHHHHHHHHhhhhcCCCccCC
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNE----LNSAAEVAEWLPQGLQQNLPENTEAN 137 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~d 137 (329)
+..|+|||+||++.+...|..++..|++ +|.|+++|++|+|.++ .+.. ..+.....+++...++++ .
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~-~p~~~~~~~ys~~~~a~~l~~~i~~l-------~ 195 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSD-KPQPGYGFNYTLDEYVSSLESLIDEL-------K 195 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CCcccccccCCHHHHHHHHHHHHHHh-------C
Confidence 3468999999999999999999999975 6999999999999887 4322 346777788888877776 5
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
.+++.++|||+||.+++.++..+| ++++|+++|..
T Consensus 196 ~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 196 SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 678999999999999999999988 99999998653
No 55
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.68 E-value=1.5e-15 Score=138.90 Aligned_cols=191 Identities=16% Similarity=0.153 Sum_probs=123.9
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChH-H---------------------H----HHHHHHHHhCCcEEEEecCC
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNK-S---------------------Y----SKIFDHIASHGFIVVAPQLY 100 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~-~---------------------~----~~~~~~la~~G~~Vv~~d~~ 100 (329)
++..+..+.|.|. ....+|+++||+++... . | ..+++.|+++||.|+++|+|
T Consensus 6 ~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 6 DGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 3777888888886 34579999999999775 2 2 46899999999999999999
Q ss_pred CCCCCCCC---ccccchHHHHHHHHHHHhhhhcCC-----------------CccCCCcceEEEEeChHHHHHHHHHHhc
Q 020199 101 TSIPPPSA---TNELNSAAEVAEWLPQGLQQNLPE-----------------NTEANVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 101 g~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~-----------------~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
|+|.+... .....+..++++++...++..... .......++.++||||||.+++.++...
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 99987622 122245666666666655433110 0000134799999999999999987542
Q ss_pred ----------cccEEEEeccCCCC-------------------------------CC-C-CCC----------CCccccc
Q 020199 161 ----------GFGAVIGLDPVAGT-------------------------------SK-T-TGL----------DPSILSF 187 (329)
Q Consensus 161 ----------~v~~~v~~~p~~~~-------------------------------~~-~-~~~----------~~~~~~~ 187 (329)
.++++|+++|.... .. . ... ++..+..
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~ 243 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDG 243 (332)
T ss_pred ccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccCC
Confidence 27777766653110 00 0 000 0100000
Q ss_pred ------------------Ccc-CC--CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCccccc
Q 020199 188 ------------------DSF-DF--SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDIL 246 (329)
Q Consensus 188 ------------------~~~-~i--~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~ 246 (329)
... .+ ++|+|+++ |+.|.++++. ....++++...+.+.+.++++++|..+.
T Consensus 244 ~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~---G~~D~vv~~~-----~~~~~~~~~~~~~~~l~~~~g~~H~i~~ 315 (332)
T TIGR01607 244 GITFNLASELIKATDTLDCDIDYIPKDIPILFIH---SKGDCVCSYE-----GTVSFYNKLSISNKELHTLEDMDHVITI 315 (332)
T ss_pred cccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEE---eCCCCccCHH-----HHHHHHHhccCCCcEEEEECCCCCCCcc
Confidence 122 44 78999999 8889987743 2344566666555589999999996554
Q ss_pred C
Q 020199 247 D 247 (329)
Q Consensus 247 d 247 (329)
+
T Consensus 316 E 316 (332)
T TIGR01607 316 E 316 (332)
T ss_pred C
Confidence 3
No 56
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.68 E-value=1.5e-15 Score=133.92 Aligned_cols=108 Identities=18% Similarity=0.170 Sum_probs=83.9
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
...+.+||+||+|.....|-.-.+.|++ .+.|+++|++|.|.|+ ++.-..+......+..+.+++.. ...+.++.
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SS-RP~F~~d~~~~e~~fvesiE~WR---~~~~L~Km 162 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSS-RPKFSIDPTTAEKEFVESIEQWR---KKMGLEKM 162 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCC-CCCCCCCcccchHHHHHHHHHHH---HHcCCcce
Confidence 4578899999999999998888889988 6999999999999998 44332222222333333343331 12267899
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
.|+||||||+++..+|..+| |+.+|+++|+...
T Consensus 163 ilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 163 ILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFP 197 (365)
T ss_pred eEeeccchHHHHHHHHHhChHhhceEEEecccccc
Confidence 99999999999999999999 9999999998765
No 57
>PRK11460 putative hydrolase; Provisional
Probab=99.68 E-value=4.7e-15 Score=128.85 Aligned_cols=164 Identities=16% Similarity=0.161 Sum_probs=102.6
Q ss_pred CCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCC--C-----------ccccchHHHHHHHHHHHhh
Q 020199 61 KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPS--A-----------TNELNSAAEVAEWLPQGLQ 127 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~--~-----------~~~~~~~~~~~~~l~~~~~ 127 (329)
....|+||++||+|++...|..+++.|+..++.+..+..+|...... . .....++....+.+.+.++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 44579999999999999999999999998765444444444311100 0 0111122233333333332
Q ss_pred hhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCCCCCcccccCccCCCCCeEEEecCCCC
Q 020199 128 QNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGG 205 (329)
Q Consensus 128 ~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~~~~G~ 205 (329)
.+.. ...++.++|+++|||+||.+++.++...+ +.+++.+++.... .. .....+.|+|+++ |+
T Consensus 93 ~~~~-~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-----~~------~~~~~~~pvli~h---G~ 157 (232)
T PRK11460 93 YWQQ-QSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-----LP------ETAPTATTIHLIH---GG 157 (232)
T ss_pred HHHH-hcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-----cc------ccccCCCcEEEEe---cC
Confidence 2211 22457789999999999999999988777 5667766653211 00 0113478999999 88
Q ss_pred CcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 206 VARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 206 ~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
.|.++|..... ...+.++...... ++.+++++||
T Consensus 158 ~D~vvp~~~~~--~~~~~L~~~g~~~-~~~~~~~~gH 191 (232)
T PRK11460 158 EDPVIDVAHAV--AAQEALISLGGDV-TLDIVEDLGH 191 (232)
T ss_pred CCCccCHHHHH--HHHHHHHHCCCCe-EEEEECCCCC
Confidence 89998854322 2333444444444 7888999999
No 58
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.65 E-value=4.1e-15 Score=135.87 Aligned_cols=194 Identities=14% Similarity=0.166 Sum_probs=120.4
Q ss_pred CCCceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHH-HHHHHhCCcEEEEecCCCCCCCCC
Q 020199 29 RGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKI-FDHIASHGFIVVAPQLYTSIPPPS 107 (329)
Q Consensus 29 ~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~-~~~la~~G~~Vv~~d~~g~~~~~~ 107 (329)
..++.++.+.+.+. +..+.++++.|...++.|+||++.|.-+-..++..+ .++|+.+|++++++|.||.|.+..
T Consensus 160 l~~~~i~~v~iP~e-----g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~ 234 (411)
T PF06500_consen 160 LSDYPIEEVEIPFE-----GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK 234 (411)
T ss_dssp HSSSEEEEEEEEET-----TCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT
T ss_pred hCCCCcEEEEEeeC-----CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc
Confidence 35788999999997 789999999999888899999999999988775544 567999999999999999988642
Q ss_pred Cccc---cchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc--cccEEEEeccCCCCC-----CC
Q 020199 108 ATNE---LNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY--GFGAVIGLDPVAGTS-----KT 177 (329)
Q Consensus 108 ~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~--~v~~~v~~~p~~~~~-----~~ 177 (329)
.+.. ......+++++.+ ...+|.++|+++|.||||+.|+++|... .+++++.++|....- ..
T Consensus 235 ~~l~~D~~~l~~aVLd~L~~--------~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~ 306 (411)
T PF06500_consen 235 WPLTQDSSRLHQAVLDYLAS--------RPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQ 306 (411)
T ss_dssp T-S-S-CCHHHHHHHHHHHH--------STTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHH
T ss_pred CCCCcCHHHHHHHHHHHHhc--------CCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHH
Confidence 2211 1224455666544 1345999999999999999999998654 399999998753220 00
Q ss_pred CCCCCc----------------------cccc----C-c---cCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHc
Q 020199 178 TGLDPS----------------------ILSF----D-S---FDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRC 227 (329)
Q Consensus 178 ~~~~~~----------------------~~~~----~-~---~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~ 227 (329)
...+.. ...+ + - -+..+|+|.+. ++.|.+.|. +-...+...
T Consensus 307 ~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~---~~~D~v~P~------eD~~lia~~ 377 (411)
T PF06500_consen 307 QRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAIN---GEDDPVSPI------EDSRLIAES 377 (411)
T ss_dssp TTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEE---ETT-SSS-H------HHHHHHHHT
T ss_pred hcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEee---cCCCCCCCH------HHHHHHHhc
Confidence 000000 0000 1 1 25678999999 777998772 234456666
Q ss_pred cCCCeeEEEeccCC-cccc
Q 020199 228 KNSSRAHFVATDYG-HMDI 245 (329)
Q Consensus 228 ~~~~k~~~~~~~~g-H~~~ 245 (329)
..+. ....++... |+++
T Consensus 378 s~~g-k~~~~~~~~~~~gy 395 (411)
T PF06500_consen 378 STDG-KALRIPSKPLHMGY 395 (411)
T ss_dssp BTT--EEEEE-SSSHHHHH
T ss_pred CCCC-ceeecCCCccccch
Confidence 6666 444454433 6433
No 59
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.65 E-value=3.2e-15 Score=135.12 Aligned_cols=196 Identities=17% Similarity=0.174 Sum_probs=119.1
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEecC-CCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCc-
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVTPA-GKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSAT- 109 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~P~-~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~- 109 (329)
+.+...+++.. ++.++.++++.|+ ..++.|+||.+||+++....+.... .++..||+|+.+|.||.+......
T Consensus 54 ~~vy~v~f~s~----~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 54 VEVYDVSFESF----DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp EEEEEEEEEEG----GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred EEEEEEEEEcc----CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCcc
Confidence 44444444444 3889999999999 6788999999999999877665543 478999999999999987321000
Q ss_pred ------------cccc------hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEecc
Q 020199 110 ------------NELN------SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDP 170 (329)
Q Consensus 110 ------------~~~~------~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p 170 (329)
..+. ....+.......++ .+.....+|.++|++.|.|+||.+++.+|+.++ |++++...|
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd-~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP 207 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVD-FLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVP 207 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESE
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHH-HHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCC
Confidence 0011 11222222222122 122235668999999999999999999999888 999998888
Q ss_pred CCCCCC-----CC-C------------------CCCccc---cc---Ccc--CCCCCeEEEecCCCCCcccCccCCCCCC
Q 020199 171 VAGTSK-----TT-G------------------LDPSIL---SF---DSF--DFSIPVTVIGTGLGGVARCITACAPEGA 218 (329)
Q Consensus 171 ~~~~~~-----~~-~------------------~~~~~~---~~---~~~--~i~~P~Lii~~~~G~~D~~~~~~~~~~~ 218 (329)
+...-. .. . ..+.++ .+ ..+ .|++|+++-. |-.|.++||.
T Consensus 208 ~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~---gl~D~~cPP~----- 279 (320)
T PF05448_consen 208 FLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSV---GLQDPVCPPS----- 279 (320)
T ss_dssp SSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEE---ETT-SSS-HH-----
T ss_pred CccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEE---ecCCCCCCch-----
Confidence 764310 00 0 000111 11 223 8999999999 7789998876
Q ss_pred CHHHHHHHccCCCeeEEEeccCCc
Q 020199 219 NHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 219 ~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
.+...|+++.+++ ++.+++..+|
T Consensus 280 t~fA~yN~i~~~K-~l~vyp~~~H 302 (320)
T PF05448_consen 280 TQFAAYNAIPGPK-ELVVYPEYGH 302 (320)
T ss_dssp HHHHHHCC--SSE-EEEEETT--S
T ss_pred hHHHHHhccCCCe-eEEeccCcCC
Confidence 4556678887775 9999999999
No 60
>PRK07581 hypothetical protein; Validated
Probab=99.63 E-value=8.1e-15 Score=134.71 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=68.8
Q ss_pred CccEEEEECCCCCChHHHHHHH---HHHHhCCcEEEEecCCCCCCCCCCccc------cch-----HHHHHHHHHH-Hhh
Q 020199 63 TFNVILFLHGTSLSNKSYSKIF---DHIASHGFIVVAPQLYTSIPPPSATNE------LNS-----AAEVAEWLPQ-GLQ 127 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~---~~la~~G~~Vv~~d~~g~~~~~~~~~~------~~~-----~~~~~~~l~~-~~~ 127 (329)
..|+|++.||++++...|..+. ..|...+|.|+++|+||+|.+. .+.. ... +.+.+..... .++
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSS-SPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCC-CCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 4578888888887776665543 3676678999999999999886 3321 111 2222222111 223
Q ss_pred hhcCCCccCCCcce-EEEEeChHHHHHHHHHHhcc--ccEEEEecc
Q 020199 128 QNLPENTEANVSLV-AVMGHSRGGQTAFALSLRYG--FGAVIGLDP 170 (329)
Q Consensus 128 ~~~~~~~~~d~~~i-~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p 170 (329)
++ +.+++ .++||||||.+++.+|.++| |+++|++++
T Consensus 119 ~l-------gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 119 KF-------GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred Hh-------CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 34 66784 79999999999999999999 888887743
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=1.5e-14 Score=122.99 Aligned_cols=188 Identities=18% Similarity=0.265 Sum_probs=136.1
Q ss_pred eeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCcc-
Q 020199 33 STKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIAS-HGFIVVAPQLYTSIPPPSATN- 110 (329)
Q Consensus 33 ~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~- 110 (329)
.++...+... ++..+....+.|... ..+.++++||...+......+...|+. -+++|+.+|+.|+|.+.+.+.
T Consensus 34 ~v~v~~~~t~----rgn~~~~~y~~~~~~-~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE 108 (258)
T KOG1552|consen 34 FVEVFKVKTS----RGNEIVCMYVRPPEA-AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE 108 (258)
T ss_pred ccceEEeecC----CCCEEEEEEEcCccc-cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc
Confidence 4444444444 477777777777644 468999999998877777777777776 389999999999988874333
Q ss_pred --ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhccccEEEEeccCCCCCCCCCC-CCccccc
Q 020199 111 --ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGL-DPSILSF 187 (329)
Q Consensus 111 --~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~~~~~~~-~~~~~~~ 187 (329)
...|++++.+|+++.- + ..++|+++|+|+|...++.+|.+.++.++|+.+|+.+....... ....+.+
T Consensus 109 ~n~y~Di~avye~Lr~~~--------g-~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S~~rv~~~~~~~~~~~ 179 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRY--------G-SPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTSGMRVAFPDTKTTYCF 179 (258)
T ss_pred ccchhhHHHHHHHHHhhc--------C-CCceEEEEEecCCchhhhhHhhcCCcceEEEeccchhhhhhhccCcceEEee
Confidence 3446666667766521 1 35799999999999999999999999999999998765221111 1111111
Q ss_pred ------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 188 ------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 188 ------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
+.. .+++|+|++| |+.|.+++.... ...+++++.+. +..+++|+||.
T Consensus 180 d~f~~i~kI~~i~~PVLiiH---gtdDevv~~sHg-----~~Lye~~k~~~-epl~v~g~gH~ 233 (258)
T KOG1552|consen 180 DAFPNIEKISKITCPVLIIH---GTDDEVVDFSHG-----KALYERCKEKV-EPLWVKGAGHN 233 (258)
T ss_pred ccccccCcceeccCCEEEEe---cccCceeccccc-----HHHHHhccccC-CCcEEecCCCc
Confidence 334 7889999999 888999885433 23477888776 88999999995
No 62
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.63 E-value=8.9e-15 Score=134.67 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=63.0
Q ss_pred HHHHHHH---HHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce-EEEEeChHHHHHH
Q 020199 79 SYSKIFD---HIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV-AVMGHSRGGQTAF 154 (329)
Q Consensus 79 ~~~~~~~---~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i-~l~GhS~GG~~a~ 154 (329)
.|..+.. .|...+|.|+++|+||++.+. .. .....+..+++...++++ +.+++ .++||||||.+++
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~-~~--~~~~~~~a~dl~~ll~~l-------~l~~~~~lvG~SmGG~vA~ 153 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSL-DV--PIDTADQADAIALLLDAL-------GIARLHAFVGYSYGALVGL 153 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCC-CC--CCCHHHHHHHHHHHHHHc-------CCCcceEEEEECHHHHHHH
Confidence 5766765 564456999999999987664 22 234556677777777665 55554 7999999999999
Q ss_pred HHHHhcc--ccEEEEeccC
Q 020199 155 ALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 155 ~~a~~~~--v~~~v~~~p~ 171 (329)
.+|.++| ++++|++++.
T Consensus 154 ~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 154 QFASRHPARVRTLVVVSGA 172 (343)
T ss_pred HHHHHChHhhheEEEECcc
Confidence 9999998 8999988754
No 63
>PLN02872 triacylglycerol lipase
Probab=99.63 E-value=3.7e-15 Score=138.53 Aligned_cols=130 Identities=18% Similarity=0.102 Sum_probs=86.4
Q ss_pred cccCCCCcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCC----CCCccEEEEECCCCCChHHH------HHHHHHHHh
Q 020199 20 ATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAG----KGTFNVILFLHGTSLSNKSY------SKIFDHIAS 89 (329)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~----~~~~p~vi~~HG~~~~~~~~------~~~~~~la~ 89 (329)
.+..++..+..-|+++.-.++..| |..+.+..+.+.. ..+.|+|+++||++.++..| ..++..|++
T Consensus 30 ~t~~~~~i~~~gy~~e~h~v~T~D----Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~ 105 (395)
T PLN02872 30 ESLCAQLIHPAGYSCTEHTIQTKD----GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD 105 (395)
T ss_pred hhhHHHHHHHcCCCceEEEEECCC----CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh
Confidence 334455556678999999999886 7778777663321 12468999999999887776 356778999
Q ss_pred CCcEEEEecCCCCCCCCC--------CccccchHHHHH-HHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHH
Q 020199 90 HGFIVVAPQLYTSIPPPS--------ATNELNSAAEVA-EWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALS 157 (329)
Q Consensus 90 ~G~~Vv~~d~~g~~~~~~--------~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a 157 (329)
+||.|+++|.||++.+.+ ...+..+..+.. .++...++.+... ..+++.++|||+||.+++.++
T Consensus 106 ~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~----~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 106 HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI----TNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc----cCCceEEEEECHHHHHHHHHh
Confidence 999999999999764321 011111222222 3444444433211 236899999999999988554
No 64
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=8.6e-15 Score=132.89 Aligned_cols=101 Identities=24% Similarity=0.307 Sum_probs=81.2
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhC-CcEEEEecCCCCCCCCC-CccccchHHHHHHHHHHHhhhhcCCCccCCCc
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASH-GFIVVAPQLYTSIPPPS-ATNELNSAAEVAEWLPQGLQQNLPENTEANVS 139 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~-G~~Vv~~d~~g~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~ 139 (329)
...|.|+++|||+++...|+.....|.+. |+.|+++|.+|+|.++. .+....+.....+.+.....+. ...
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-------~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-------FVE 128 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-------cCc
Confidence 46799999999999999999999888876 69999999999884431 2333456666677777766665 456
Q ss_pred ceEEEEeChHHHHHHHHHHhcc--ccEEEEec
Q 020199 140 LVAVMGHSRGGQTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~ 169 (329)
++.++|||+||.+++.+|..+| ++.+++++
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~ 160 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPETVDSLVLLD 160 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcccccceeeec
Confidence 7999999999999999999999 88888333
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.63 E-value=2.9e-14 Score=125.22 Aligned_cols=201 Identities=15% Similarity=0.157 Sum_probs=127.9
Q ss_pred CCcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCCCC
Q 020199 25 PVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLYTS 102 (329)
Q Consensus 25 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~g~ 102 (329)
...+.-......+.+..++ |..+...+..+....+.|.||++||+.|+... .+.+++.+.++||.||++++||+
T Consensus 40 ~frr~~~~~~~re~v~~pd----g~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgc 115 (345)
T COG0429 40 LFRRKPKVAYTRERLETPD----GGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGC 115 (345)
T ss_pred HhhcccccccceEEEEcCC----CCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccc
Confidence 3334445566666778876 78888887776656677999999999886543 45788899999999999999999
Q ss_pred CCCCCCc------cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccE-EEEeccC
Q 020199 103 IPPPSAT------NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGA-VIGLDPV 171 (329)
Q Consensus 103 ~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~-~v~~~p~ 171 (329)
+.+.... ....|+...++++.. .. -..++..+|+|+||.+.+.+.++.. +.+ ++...|+
T Consensus 116 s~~~n~~p~~yh~G~t~D~~~~l~~l~~----~~------~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 116 SGEANTSPRLYHSGETEDIRFFLDWLKA----RF------PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred cCCcccCcceecccchhHHHHHHHHHHH----hC------CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 8775211 122344445555444 21 4568999999999966666555543 333 3333343
Q ss_pred CCC-------------------------------------------------CCCCCCCCcc----ccc-----------
Q 020199 172 AGT-------------------------------------------------SKTTGLDPSI----LSF----------- 187 (329)
Q Consensus 172 ~~~-------------------------------------------------~~~~~~~~~~----~~~----------- 187 (329)
+.. ....+++..+ +.+
T Consensus 186 Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS 265 (345)
T COG0429 186 DLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS 265 (345)
T ss_pred HHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcc
Confidence 221 0001111111 111
Q ss_pred --Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCC
Q 020199 188 --DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDD 248 (329)
Q Consensus 188 --~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~ 248 (329)
.-+ +|.+|+|+|+ ..+|+++++..-.. .....++...+.+.+.+||.+|++.
T Consensus 266 s~~~L~~Ir~PtLii~---A~DDP~~~~~~iP~------~~~~~np~v~l~~t~~GGHvGfl~~ 320 (345)
T COG0429 266 SLPLLPKIRKPTLIIN---AKDDPFMPPEVIPK------LQEMLNPNVLLQLTEHGGHVGFLGG 320 (345)
T ss_pred ccccccccccceEEEe---cCCCCCCChhhCCc------chhcCCCceEEEeecCCceEEeccC
Confidence 223 8999999999 55599888743322 1221344437888889999999875
No 66
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.62 E-value=6.3e-15 Score=132.53 Aligned_cols=196 Identities=19% Similarity=0.287 Sum_probs=111.8
Q ss_pred ccCCCCcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCC-CCCccEEEEECCCCCChHH--------------H----H
Q 020199 21 TATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAG-KGTFNVILFLHGTSLSNKS--------------Y----S 81 (329)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~-~~~~p~vi~~HG~~~~~~~--------------~----~ 81 (329)
|.+....+...|+.++..++... +..+.++|+.|.. +++.|.||.+||.++..+. + .
T Consensus 75 p~~l~~eqrdGY~~EKv~f~~~p----~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~ 150 (390)
T PF12715_consen 75 PEVLETEQRDGYTREKVEFNTTP----GSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQ 150 (390)
T ss_dssp -EEEEEEEETTEEEEEEEE--ST----TB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT
T ss_pred CeEEEEEecCCeEEEEEEEEccC----CeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccc
Confidence 33444455677888888887664 8899999999997 7889999999998875432 1 2
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCCccc-----cchHH--------------HHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 82 KIFDHIASHGFIVVAPQLYTSIPPPSATNE-----LNSAA--------------EVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 82 ~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~-----~~~~~--------------~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
.++.+||++||+|+++|.+|.|... .... ..+.. ....|..-..-..+.....+|.++|+
T Consensus 151 ~~g~~LAk~GYVvla~D~~g~GER~-~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG 229 (390)
T PF12715_consen 151 DYGDQLAKRGYVVLAPDALGFGERG-DMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIG 229 (390)
T ss_dssp -HHHHHHTTTSEEEEE--TTSGGG--SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEE
T ss_pred cHHHHHHhCCCEEEEEccccccccc-cccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceE
Confidence 4688999999999999999887654 2110 00111 11112111223445556788999999
Q ss_pred EEEeChHHHHHHHHHHhcc-ccEEEEeccCCCC-------------------CCCCCCCCccccc------CccCCCCCe
Q 020199 143 VMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGT-------------------SKTTGLDPSILSF------DSFDFSIPV 196 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~-------------------~~~~~~~~~~~~~------~~~~i~~P~ 196 (329)
++|+||||..++.+++..+ |++.+..+-.... .-....-|.++.+ .++....|+
T Consensus 230 ~~GfSmGg~~a~~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPl 309 (390)
T PF12715_consen 230 CMGFSMGGYRAWWLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPL 309 (390)
T ss_dssp EEEEGGGHHHHHHHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-E
T ss_pred EEeecccHHHHHHHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcc
Confidence 9999999999999999887 8777654422111 0001122333322 223556899
Q ss_pred EEEecCCCCCcccCccCCCCCCCHHHHHHHccCCC
Q 020199 197 TVIGTGLGGVARCITACAPEGANHEEFFNRCKNSS 231 (329)
Q Consensus 197 Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 231 (329)
|++. |+.|.++|- -...|+....+.
T Consensus 310 l~~n---G~~Dklf~i-------V~~AY~~~~~p~ 334 (390)
T PF12715_consen 310 LFEN---GGKDKLFPI-------VRRAYAIMGAPD 334 (390)
T ss_dssp EESS----B-HHHHHH-------HHHHHHHTT-GG
T ss_pred hhhc---CCcccccHH-------HHHHHHhcCCCc
Confidence 9999 888998762 345677666655
No 67
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.61 E-value=1.2e-14 Score=119.49 Aligned_cols=193 Identities=15% Similarity=0.186 Sum_probs=140.2
Q ss_pred CceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCc
Q 020199 31 IYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIAS-HGFIVVAPQLYTSIPPPSAT 109 (329)
Q Consensus 31 ~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~ 109 (329)
..+.++.++..+| ..++.+++.. +....|+++++|+..|+....-.+++-+-. .+..|+.+++||.|.+.+.+
T Consensus 51 n~pye~i~l~T~D----~vtL~a~~~~--~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp 124 (300)
T KOG4391|consen 51 NMPYERIELRTRD----KVTLDAYLML--SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSP 124 (300)
T ss_pred CCCceEEEEEcCc----ceeEeeeeec--ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCc
Confidence 3455555555654 6677777766 444789999999999988776666665543 58999999999999987433
Q ss_pred cc---cchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCC--CCCCC
Q 020199 110 NE---LNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKT--TGLDP 182 (329)
Q Consensus 110 ~~---~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~--~~~~~ 182 (329)
.+ .-|.+.+++++... ...|.++|.++|.|.||.+|+.+|+++. +.+++.-+.+...... ...-|
T Consensus 125 sE~GL~lDs~avldyl~t~--------~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p 196 (300)
T KOG4391|consen 125 SEEGLKLDSEAVLDYLMTR--------PDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP 196 (300)
T ss_pred cccceeccHHHHHHHHhcC--------ccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc
Confidence 32 23677778877652 2337889999999999999999998876 8888887766554111 00000
Q ss_pred ---c---cccc-------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccc
Q 020199 183 ---S---ILSF-------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDI 245 (329)
Q Consensus 183 ---~---~~~~-------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~ 245 (329)
+ .+.+ ... +.+.|.|++. |..|.++||. .....+..|.+..|++..+|++.|++.
T Consensus 197 ~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiS---GlkDelVPP~-----~Mr~Ly~~c~S~~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 197 FPMKYIPLLCYKNKWLSYRKIGQCRMPFLFIS---GLKDELVPPV-----MMRQLYELCPSRTKRLAEFPDGTHNDT 265 (300)
T ss_pred chhhHHHHHHHHhhhcchhhhccccCceEEee---cCccccCCcH-----HHHHHHHhCchhhhhheeCCCCccCce
Confidence 0 0001 223 6689999999 8889999976 466779999999989999999999654
No 68
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.61 E-value=7.8e-15 Score=135.45 Aligned_cols=116 Identities=16% Similarity=0.158 Sum_probs=82.7
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChH-----------HHHHHH---HHHHhCCcEEEEecCCC--CCCCCCCc--
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNK-----------SYSKIF---DHIASHGFIVVAPQLYT--SIPPPSAT-- 109 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~-----------~~~~~~---~~la~~G~~Vv~~d~~g--~~~~~~~~-- 109 (329)
+..+....+-+......|+|||+||++++.. .|..+. ..|.+.+|.|+++|++| ++.+. ..
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~-~~~~ 93 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG-PSSI 93 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC-CCCC
Confidence 4455555554432233579999999999763 255553 35667789999999999 33332 10
Q ss_pred ----------cccchHHHHHHHHHHHhhhhcCCCccCCCcc-eEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 110 ----------NELNSAAEVAEWLPQGLQQNLPENTEANVSL-VAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 110 ----------~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~-i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.....+.+..+++...++++ +.++ +.++||||||.+++.++..+| ++++|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHL-------GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHc-------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 11245667777777767665 6677 999999999999999999998 8888888754
No 69
>PRK10115 protease 2; Provisional
Probab=99.60 E-value=8.9e-14 Score=138.21 Aligned_cols=199 Identities=18% Similarity=0.194 Sum_probs=133.7
Q ss_pred cCCCCceeEEEEeecCCCCCCCCCeeEEEEecC---CCCCccEEEEECCCCCChH--HHHHHHHHHHhCCcEEEEecCCC
Q 020199 27 FTRGIYSTKRITLETSSPSSPPPPKPLIIVTPA---GKGTFNVILFLHGTSLSNK--SYSKIFDHIASHGFIVVAPQLYT 101 (329)
Q Consensus 27 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~---~~~~~p~vi~~HG~~~~~~--~~~~~~~~la~~G~~Vv~~d~~g 101 (329)
..+..+.++...++..| |..+.+++.+++ ..++.|+||+.||..+... .|......|+++||+|+.++.||
T Consensus 409 ~~~~~~~~e~v~~~s~D----G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RG 484 (686)
T PRK10115 409 FDAANYRSEHLWITARD----GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRG 484 (686)
T ss_pred cCccccEEEEEEEECCC----CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCC
Confidence 34456777777777775 899999666544 2456799999999887653 36666778999999999999999
Q ss_pred CCCCCC----------CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEec
Q 020199 102 SIPPPS----------ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 102 ~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~ 169 (329)
++.-+. +.....|+.+.++++.+ .+.+|.++++++|.|+||+++..++..+| ++|+|...
T Consensus 485 s~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~--------~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~v 556 (686)
T PRK10115 485 GGELGQQWYEDGKFLKKKNTFNDYLDACDALLK--------LGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQV 556 (686)
T ss_pred CCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH--------cCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecC
Confidence 877651 11222334444444432 23558899999999999999999998887 89998887
Q ss_pred cCCCCCCC---CCCC-----------Cc-------cccc---Ccc-CCCCC-eEEEecCCCCCcccCccCCCCCCCHHHH
Q 020199 170 PVAGTSKT---TGLD-----------PS-------ILSF---DSF-DFSIP-VTVIGTGLGGVARCITACAPEGANHEEF 223 (329)
Q Consensus 170 p~~~~~~~---~~~~-----------~~-------~~~~---~~~-~i~~P-~Lii~~~~G~~D~~~~~~~~~~~~~~~~ 223 (329)
|+...... ..++ |. +..+ ... +++.| +|+++ |..|.-+|+..+.. +...
T Consensus 557 p~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~---g~~D~RV~~~~~~k--~~a~ 631 (686)
T PRK10115 557 PFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTT---GLHDSQVQYWEPAK--WVAK 631 (686)
T ss_pred CchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEe---cCCCCCcCchHHHH--HHHH
Confidence 76553210 0000 10 0011 122 66789 56679 77799888664432 3444
Q ss_pred HHHccCCCeeEEEe---ccCCcc
Q 020199 224 FNRCKNSSRAHFVA---TDYGHM 243 (329)
Q Consensus 224 ~~~~~~~~k~~~~~---~~~gH~ 243 (329)
++....+. ..+++ +++||.
T Consensus 632 Lr~~~~~~-~~vl~~~~~~~GHg 653 (686)
T PRK10115 632 LRELKTDD-HLLLLCTDMDSGHG 653 (686)
T ss_pred HHhcCCCC-ceEEEEecCCCCCC
Confidence 55555555 67777 899994
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.60 E-value=6.6e-14 Score=136.60 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=87.7
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChH----HHHHHHHHHHhCCcEEEEecCCCCCCCCCC-----ccccchHHH
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNK----SYSKIFDHIASHGFIVVAPQLYTSIPPPSA-----TNELNSAAE 117 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~----~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~-----~~~~~~~~~ 117 (329)
++..+.+++|.|...++.|+||++||++.... .....+..|+++||.|+++|+||.+.+.+. .....+..+
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~ 84 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYD 84 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHH
Confidence 37889999999987778999999999998653 122356789999999999999999988732 223345556
Q ss_pred HHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 118 VAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 118 ~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+++|+... .. ...+|+++|||+||.+++.+|...+ +++++...+.
T Consensus 85 ~i~~l~~q--------~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 85 LVDWIAKQ--------PW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred HHHHHHhC--------CC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 66665442 11 2368999999999999999998876 7777765543
No 71
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.58 E-value=4.7e-14 Score=131.50 Aligned_cols=102 Identities=14% Similarity=0.250 Sum_probs=75.1
Q ss_pred CccEEEEECCCCCChHH-------------HHHHH---HHHHhCCcEEEEecCCCC-CCCCCCc----c---------cc
Q 020199 63 TFNVILFLHGTSLSNKS-------------YSKIF---DHIASHGFIVVAPQLYTS-IPPPSAT----N---------EL 112 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~-------------~~~~~---~~la~~G~~Vv~~d~~g~-~~~~~~~----~---------~~ 112 (329)
..|+|||+||++++... |..+. ..|-..+|.|+++|++|+ +.+.... . ..
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 36899999999999874 44443 134356799999999983 3222111 0 13
Q ss_pred chHHHHHHHHHHHhhhhcCCCccCCCcc-eEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 113 NSAAEVAEWLPQGLQQNLPENTEANVSL-VAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~-i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
..+.+..+++...++++ +.++ +.++||||||.+++.+|..+| ++++|++++.
T Consensus 127 ~~~~~~~~~~~~~l~~l-------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL-------GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred CCHHHHHHHHHHHHHHh-------CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 45777778887777766 6677 489999999999999999998 8888888754
No 72
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.58 E-value=1e-13 Score=118.80 Aligned_cols=110 Identities=24% Similarity=0.324 Sum_probs=77.8
Q ss_pred EEEecCC-CCCccEEEEECCCCCChHHHH---HHHHHHHhCCcEEEEecCCCCCCCCCCc------------cccchHHH
Q 020199 54 IIVTPAG-KGTFNVILFLHGTSLSNKSYS---KIFDHIASHGFIVVAPQLYTSIPPPSAT------------NELNSAAE 117 (329)
Q Consensus 54 ~l~~P~~-~~~~p~vi~~HG~~~~~~~~~---~~~~~la~~G~~Vv~~d~~g~~~~~~~~------------~~~~~~~~ 117 (329)
++|.|.. .++.|+||++||++++...+. .+.+.+.++||.|++||++|++...... ....++..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 6788875 457899999999999877765 3556666789999999999875332100 01112222
Q ss_pred HHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 118 VAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 118 ~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.++++.+ ...+|.++|+++|||+||.+++.++..++ +.+++.++..
T Consensus 82 ~i~~~~~--------~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 82 LIDAVKA--------NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred HHHHHHH--------hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 2332222 23458889999999999999999999988 7787777644
No 73
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.58 E-value=7.4e-14 Score=122.93 Aligned_cols=122 Identities=14% Similarity=0.096 Sum_probs=87.5
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCC----hHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLS----NKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLP 123 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~----~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~ 123 (329)
...+...++.|...++.|+|||+||+++. ...|..+++.|+++||.|+.+|+||+|.+. ............+++.
T Consensus 9 ~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~-g~~~~~~~~~~~~Dv~ 87 (266)
T TIGR03101 9 HGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSA-GDFAAARWDVWKEDVA 87 (266)
T ss_pred CCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCC-CccccCCHHHHHHHHH
Confidence 45567777777766567899999999864 234677899999999999999999999886 3222223333333333
Q ss_pred HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 124 QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 124 ~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
..++.+.. . +..+|+++||||||.+++.++.+++ ++++|+++|....
T Consensus 88 ~ai~~L~~-~---~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 88 AAYRWLIE-Q---GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHh-c---CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 32211100 1 3568999999999999999998876 8899999987653
No 74
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.57 E-value=9.3e-14 Score=149.45 Aligned_cols=100 Identities=21% Similarity=0.242 Sum_probs=81.9
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc--------ccchHHHHHHHHHHHhhhhcCCCc
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATN--------ELNSAAEVAEWLPQGLQQNLPENT 134 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~ 134 (329)
..|+|||+||++++...|..+...|++. |.|+++|+||+|.+. ... .....+...+++...++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~-~~~~~~~~~~~~~~si~~~a~~l~~ll~~l----- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSK-IQNHAKETQTEPTLSVELVADLLYKLIEHI----- 1442 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCC-CccccccccccccCCHHHHHHHHHHHHHHh-----
Confidence 4689999999999999999999999764 999999999999876 321 1234666677777666655
Q ss_pred cCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 135 EANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 135 ~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+.+++.++||||||.+++.++.++| +++++++++.
T Consensus 1443 --~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 --TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred --CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 5678999999999999999999988 8888888753
No 75
>PRK11071 esterase YqiA; Provisional
Probab=99.56 E-value=2.6e-13 Score=114.15 Aligned_cols=145 Identities=19% Similarity=0.247 Sum_probs=95.9
Q ss_pred cEEEEECCCCCChHHHH--HHHHHHHhC--CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 65 NVILFLHGTSLSNKSYS--KIFDHIASH--GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~--~~~~~la~~--G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
|.||++||++++...|. .+...++++ +|.|+++|++|++ .+..+.+.+.+++. +.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-------~~~~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH-------GGDP 62 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-------CCCC
Confidence 68999999999998876 355677663 7999999999862 12344444445444 5578
Q ss_pred eEEEEeChHHHHHHHHHHhccccEEEEeccCCCC--------C--CCCCCCC-cccc---------c--CccCCCCCeEE
Q 020199 141 VAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGT--------S--KTTGLDP-SILS---------F--DSFDFSIPVTV 198 (329)
Q Consensus 141 i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~--------~--~~~~~~~-~~~~---------~--~~~~i~~P~Li 198 (329)
+.++|||+||.+++.+|..++.+ +++++|...+ . ....... ..+. . ..+....|+++
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~i 141 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFMLP-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIWL 141 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCCC-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEEE
Confidence 99999999999999999998854 4667775542 0 0000000 0010 0 11245678889
Q ss_pred EecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 199 IGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 199 i~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
++ |+.|.++|+. .....++ .. ..++++|++|
T Consensus 142 ih---g~~De~V~~~-----~a~~~~~----~~-~~~~~~ggdH 172 (190)
T PRK11071 142 LQ---QTGDEVLDYR-----QAVAYYA----AC-RQTVEEGGNH 172 (190)
T ss_pred EE---eCCCCcCCHH-----HHHHHHH----hc-ceEEECCCCc
Confidence 99 8889998844 1222233 23 4567799999
No 76
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.55 E-value=1.2e-13 Score=118.75 Aligned_cols=173 Identities=18% Similarity=0.223 Sum_probs=96.2
Q ss_pred EEecCCCCCccEEEEECCCCCChHHHHHHHH-HHHhCCcEEEEecCCC------CCCC--CC------Cc---cccchHH
Q 020199 55 IVTPAGKGTFNVILFLHGTSLSNKSYSKIFD-HIASHGFIVVAPQLYT------SIPP--PS------AT---NELNSAA 116 (329)
Q Consensus 55 l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~-~la~~G~~Vv~~d~~g------~~~~--~~------~~---~~~~~~~ 116 (329)
|..|. ....|+|||+||+|.+...+..+.. .+......++.++-+. .+.. .. .. .....+.
T Consensus 6 i~~~~-~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 6 IIEPK-GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp EE--S-ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred EeCCC-CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 34444 4467999999999999977666555 2333467777775421 1110 00 01 1233444
Q ss_pred HHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCCCCCcccccCccCCCC
Q 020199 117 EVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSI 194 (329)
Q Consensus 117 ~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~ 194 (329)
...+.+.+.++...+. .++.++|+++|+|+||.+++.++..++ +.+++.++.+........ ... ...-++
T Consensus 85 ~s~~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~--~~~----~~~~~~ 156 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE--DRP----EALAKT 156 (216)
T ss_dssp HHHHHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH--CCH----CCCCTS
T ss_pred HHHHHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc--ccc----cccCCC
Confidence 4455555555443322 368899999999999999999999987 999999997654321100 000 001268
Q ss_pred CeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 195 PVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 195 P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
|++++| |+.|.++|....+ ...++++...... ++..+++.||
T Consensus 157 pi~~~h---G~~D~vvp~~~~~--~~~~~L~~~~~~v-~~~~~~g~gH 198 (216)
T PF02230_consen 157 PILIIH---GDEDPVVPFEWAE--KTAEFLKAAGANV-EFHEYPGGGH 198 (216)
T ss_dssp -EEEEE---ETT-SSSTHHHHH--HHHHHHHCTT-GE-EEEEETT-SS
T ss_pred cEEEEe---cCCCCcccHHHHH--HHHHHHHhcCCCE-EEEEcCCCCC
Confidence 999999 8889988743222 2344555555545 8999999999
No 77
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.55 E-value=1.9e-14 Score=122.32 Aligned_cols=202 Identities=16% Similarity=0.170 Sum_probs=138.1
Q ss_pred CceeEEEEeecCCCCCCCCCeeEEEEecCCC-CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCC--
Q 020199 31 IYSTKRITLETSSPSSPPPPKPLIIVTPAGK-GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPS-- 107 (329)
Q Consensus 31 ~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~-~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~-- 107 (329)
.-.|+...+++.. .++.+|.+++..|... ++.|.||-.||+++....|..+. +++..||.|+.+|.||.+.+..
T Consensus 51 ~~~ve~ydvTf~g--~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt 127 (321)
T COG3458 51 LPRVEVYDVTFTG--YGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDT 127 (321)
T ss_pred CCceEEEEEEEec--cCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-cccccceeEEEEecccCCCccccC
Confidence 3466777777763 4699999999999965 88999999999999987765544 4678999999999999876631
Q ss_pred --Cccc-----------cc-----hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEe
Q 020199 108 --ATNE-----------LN-----SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGL 168 (329)
Q Consensus 108 --~~~~-----------~~-----~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~ 168 (329)
.+.. .+ .......++...++. +.+...+|.++|++.|.|+||.+++.+++..+ +++++..
T Consensus 128 ~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~-~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~ 206 (321)
T COG3458 128 ADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEI-LASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVAD 206 (321)
T ss_pred CCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHH-HhccCccchhheEEeccccCchhhhhhhhcChhhhccccc
Confidence 0000 00 011122222222222 22234569999999999999999999999888 8888877
Q ss_pred ccCCCCCCC-CCC----------------C---Cccc---cc---Ccc--CCCCCeEEEecCCCCCcccCccCCCCCCCH
Q 020199 169 DPVAGTSKT-TGL----------------D---PSIL---SF---DSF--DFSIPVTVIGTGLGGVARCITACAPEGANH 220 (329)
Q Consensus 169 ~p~~~~~~~-~~~----------------~---~~~~---~~---~~~--~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~ 220 (329)
-|+.+.-.. -++ . ..++ .+ ..+ ++++|+|+.. |-.|+++||. .+
T Consensus 207 ~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~sv---gL~D~vcpPs-----tq 278 (321)
T COG3458 207 YPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSV---GLMDPVCPPS-----TQ 278 (321)
T ss_pred ccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEee---cccCCCCCCh-----hh
Confidence 776553110 000 0 0010 01 223 8999999999 8889998876 34
Q ss_pred HHHHHHccCCCeeEEEeccCCcccc
Q 020199 221 EEFFNRCKNSSRAHFVATDYGHMDI 245 (329)
Q Consensus 221 ~~~~~~~~~~~k~~~~~~~~gH~~~ 245 (329)
...++.+...+ ..-+++-.+|..+
T Consensus 279 FA~yN~l~~~K-~i~iy~~~aHe~~ 302 (321)
T COG3458 279 FAAYNALTTSK-TIEIYPYFAHEGG 302 (321)
T ss_pred HHHhhcccCCc-eEEEeeccccccC
Confidence 45577777776 8889998889543
No 78
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.55 E-value=8.1e-14 Score=115.47 Aligned_cols=199 Identities=14% Similarity=0.203 Sum_probs=129.7
Q ss_pred CeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCC-CCCC--------------Cccccch
Q 020199 50 PKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSI-PPPS--------------ATNELNS 114 (329)
Q Consensus 50 ~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~-~~~~--------------~~~~~~~ 114 (329)
-+.+|+..-.+++ .-+|++.-=+|.....-+..+..+|..||.|++||+.... .+.. .+....+
T Consensus 27 gldaYv~gs~~~~-~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~ 105 (242)
T KOG3043|consen 27 GLDAYVVGSTSSK-KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKD 105 (242)
T ss_pred CeeEEEecCCCCC-eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhH
Confidence 4666666554443 3344444445555555788999999999999999984431 1110 1112234
Q ss_pred HHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCCCCCCCCCCcccccCcc-CC
Q 020199 115 AAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGTSKTTGLDPSILSFDSF-DF 192 (329)
Q Consensus 115 ~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~~~~~~~~~~~~~~~-~i 192 (329)
+...++|+... -+..+|+++|+||||..+..+....+ +.+++.+.|..... ... ++
T Consensus 106 i~~v~k~lk~~----------g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~------------~D~~~v 163 (242)
T KOG3043|consen 106 ITAVVKWLKNH----------GDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDS------------ADIANV 163 (242)
T ss_pred HHHHHHHHHHc----------CCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCCh------------hHHhcC
Confidence 55566666531 15689999999999999988888775 88888888765321 222 78
Q ss_pred CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchh
Q 020199 193 SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDP 272 (329)
Q Consensus 193 ~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (329)
++|+|++. ++.|.++|+..... +.+.++....-.-++.++++.+| +|+ .+..... ....+.
T Consensus 164 k~Pilfl~---ae~D~~~p~~~v~~--~ee~lk~~~~~~~~v~~f~g~~H------------Gf~-~~r~~~~-~Ped~~ 224 (242)
T KOG3043|consen 164 KAPILFLF---AELDEDVPPKDVKA--WEEKLKENPAVGSQVKTFSGVGH------------GFV-ARRANIS-SPEDKK 224 (242)
T ss_pred CCCEEEEe---ecccccCCHHHHHH--HHHHHhcCcccceeEEEcCCccc------------hhh-hhccCCC-ChhHHH
Confidence 99999999 77799888653322 33444444332237999999999 333 1111111 234566
Q ss_pred HHHHhhHHHHHHHHHHHc
Q 020199 273 MRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 273 ~~~~~~~~~~~fl~~~L~ 290 (329)
+.+.....++.||++||.
T Consensus 225 ~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 225 AAEEAYQRFISWFKHYLA 242 (242)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 778889999999999873
No 79
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.53 E-value=1.3e-12 Score=118.72 Aligned_cols=129 Identities=17% Similarity=0.116 Sum_probs=95.0
Q ss_pred CceeEEEEeecCCCCCCCCCeeEEEEecCCC------CCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCCCC
Q 020199 31 IYSTKRITLETSSPSSPPPPKPLIIVTPAGK------GTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLYTS 102 (329)
Q Consensus 31 ~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~------~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~g~ 102 (329)
....+++-++..| |..+.++++.+... +..|.||++||..|++.. .+.++.++.+.||.|+++++||.
T Consensus 90 ~~~y~Reii~~~D----GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~ 165 (409)
T KOG1838|consen 90 PVEYTREIIKTSD----GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGL 165 (409)
T ss_pred CCcceeEEEEeCC----CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCC
Confidence 3455566678886 89999999866533 467999999999875543 45778888899999999999997
Q ss_pred CCCCCC------ccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-----ccEEEEeccC
Q 020199 103 IPPPSA------TNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-----FGAVIGLDPV 171 (329)
Q Consensus 103 ~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-----v~~~v~~~p~ 171 (329)
+.+... ..+..|++++++++.... -..++..+|+||||.+...+.++.. +.|+...+|+
T Consensus 166 ~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~----------P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 166 GGSKLTTPRLFTAGWTEDLREVVNHIKKRY----------PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred CCCccCCCceeecCCHHHHHHHHHHHHHhC----------CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 665421 123346666666665522 3358999999999999999988764 5555666687
Q ss_pred CC
Q 020199 172 AG 173 (329)
Q Consensus 172 ~~ 173 (329)
+.
T Consensus 236 d~ 237 (409)
T KOG1838|consen 236 DL 237 (409)
T ss_pred hh
Confidence 73
No 80
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.53 E-value=4.3e-13 Score=123.84 Aligned_cols=113 Identities=10% Similarity=0.092 Sum_probs=77.6
Q ss_pred CCCeeEEEEecCCC-CCccEEEEECCCCCChHH-----HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchH-----H
Q 020199 48 PPPKPLIIVTPAGK-GTFNVILFLHGTSLSNKS-----YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSA-----A 116 (329)
Q Consensus 48 ~~~~~~~l~~P~~~-~~~p~vi~~HG~~~~~~~-----~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~-----~ 116 (329)
...+.++.|.|... ...++|+++||+..+... +..++++|+++||.|+++|++|.+.+. ......+. .
T Consensus 45 ~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~-~~~~~~d~~~~~~~ 123 (350)
T TIGR01836 45 EDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRAD-RYLTLDDYINGYID 123 (350)
T ss_pred cCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHH-hcCCHHHHHHHHHH
Confidence 44567777877632 334569999997543322 358999999999999999999887654 33222222 2
Q ss_pred HHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 117 EVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 117 ~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+.++++.+ .. +.+++.++||||||.+++.++..++ +++++.+++.
T Consensus 124 ~~v~~l~~---~~-------~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p 170 (350)
T TIGR01836 124 KCVDYICR---TS-------KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTP 170 (350)
T ss_pred HHHHHHHH---Hh-------CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccc
Confidence 22222222 11 4578999999999999999988876 7888877753
No 81
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.53 E-value=3.9e-13 Score=114.74 Aligned_cols=115 Identities=17% Similarity=0.187 Sum_probs=87.7
Q ss_pred CeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhC-CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhh
Q 020199 50 PKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASH-GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQ 128 (329)
Q Consensus 50 ~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~-G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 128 (329)
++++++-.|. ....|++++.||+|.+.-.|..++.+|.+. -..|+++|.||+|.+.......-+.+.+++++...+..
T Consensus 61 t~n~Y~t~~~-~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~ 139 (343)
T KOG2564|consen 61 TFNVYLTLPS-ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKE 139 (343)
T ss_pred eEEEEEecCC-CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHH
Confidence 5666666665 446899999999999999999999999875 57789999999998863344445667777777776666
Q ss_pred hcCCCccCCCcceEEEEeChHHHHHHHHHHhcc---ccEEEEec
Q 020199 129 NLPENTEANVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLD 169 (329)
Q Consensus 129 ~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~ 169 (329)
+... ...+|.++||||||.++...|...- +.+++.+|
T Consensus 140 ~fge----~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 140 LFGE----LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred Hhcc----CCCceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 6432 3467999999999999988776553 56666655
No 82
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.52 E-value=5.6e-13 Score=120.75 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=72.5
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccc--cchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNE--LNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
.+.|||+||+.++... ..+...+...+|.|+++|++|+|.+. .... .....+..+++...++.+ +.+++
T Consensus 27 ~~~lvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~dl~~l~~~l-------~~~~~ 97 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-PGCRRFFDPETYRIVLFDQRGCGKST-PHACLEENTTWDLVADIEKLREKL-------GIKNW 97 (306)
T ss_pred CCEEEEECCCCCCCCC-HHHHhccCccCCEEEEECCCCCCCCC-CCCCcccCCHHHHHHHHHHHHHHc-------CCCCE
Confidence 5679999998776543 24445565678999999999999887 3321 233445566665555444 55789
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEecc
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDP 170 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p 170 (329)
.++||||||.+++.++..+| ++++|++++
T Consensus 98 ~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 98 LVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred EEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 99999999999999999988 788777764
No 83
>PRK05855 short chain dehydrogenase; Validated
Probab=99.51 E-value=3.7e-13 Score=132.25 Aligned_cols=102 Identities=12% Similarity=0.113 Sum_probs=77.1
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCc-cccchHHHHHHHHHHHh
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSAT-NELNSAAEVAEWLPQGL 126 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~-~~~~~~~~~~~~l~~~~ 126 (329)
+.++....+-+ .+.|+|||+||++++...|..+.+.| ..||.|+++|+||+|.|.... ....+.....+++...+
T Consensus 12 g~~l~~~~~g~---~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i 87 (582)
T PRK05855 12 GVRLAVYEWGD---PDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVI 87 (582)
T ss_pred CEEEEEEEcCC---CCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 55555554422 23689999999999999999999999 567999999999999886212 12345677777777777
Q ss_pred hhhcCCCccCCCc-ceEEEEeChHHHHHHHHHHhc
Q 020199 127 QQNLPENTEANVS-LVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 127 ~~~~~~~~~~d~~-~i~l~GhS~GG~~a~~~a~~~ 160 (329)
+++ ... ++.++||||||.+++.++...
T Consensus 88 ~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 88 DAV-------SPDRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred HHh-------CCCCcEEEEecChHHHHHHHHHhCc
Confidence 665 334 499999999999998877663
No 84
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.47 E-value=1.3e-11 Score=111.54 Aligned_cols=196 Identities=17% Similarity=0.224 Sum_probs=138.7
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEecCC--C-CCccEEEEECCCCCC-----hHHHHHHHHHHHh-CCcEEEEecCCCC
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVTPAG--K-GTFNVILFLHGTSLS-----NKSYSKIFDHIAS-HGFIVVAPQLYTS 102 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~P~~--~-~~~p~vi~~HG~~~~-----~~~~~~~~~~la~-~G~~Vv~~d~~g~ 102 (329)
-.|...++.+.. ...+.+.||.|.. . .+.|+|||+||+|.. ...|..++..++. .+.+|+++|+|-.
T Consensus 59 ~~v~~~dv~~~~----~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA 134 (336)
T KOG1515|consen 59 NGVTSKDVTIDP----FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA 134 (336)
T ss_pred cCceeeeeEecC----CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC
Confidence 456666666663 7899999999973 3 568999999999873 3458888888865 5999999999987
Q ss_pred CCCCCCccccchHHHHHHHHHHH-hhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--------ccEEEEeccCCC
Q 020199 103 IPPPSATNELNSAAEVAEWLPQG-LQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG 173 (329)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--------v~~~v~~~p~~~ 173 (329)
.... -+...+|.-.++.|+.+. ... ...|.++|+++|-|.||.+|..++.+.. +++.+++.|+..
T Consensus 135 PEh~-~Pa~y~D~~~Al~w~~~~~~~~-----~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 135 PEHP-FPAAYDDGWAALKWVLKNSWLK-----LGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred CCCC-CCccchHHHHHHHHHHHhHHHH-----hCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 7776 777888999999999885 322 2459999999999999999998876532 899999999866
Q ss_pred CCCCCC--------------------------------C-CCcccccC-----cc-CCC-CCeEEEecCCCCCcccCccC
Q 020199 174 TSKTTG--------------------------------L-DPSILSFD-----SF-DFS-IPVTVIGTGLGGVARCITAC 213 (329)
Q Consensus 174 ~~~~~~--------------------------------~-~~~~~~~~-----~~-~i~-~P~Lii~~~~G~~D~~~~~~ 213 (329)
...... . .|-+.... .. ... .|+|++.++ .|.+.
T Consensus 209 ~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag---~D~L~--- 282 (336)
T KOG1515|consen 209 GTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAG---YDVLR--- 282 (336)
T ss_pred CCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeC---chhhh---
Confidence 411100 0 00000001 11 223 359999944 47663
Q ss_pred CCCCCCHHHHHHHccCCCeeEEEeccCCcccc
Q 020199 214 APEGANHEEFFNRCKNSSRAHFVATDYGHMDI 245 (329)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~ 245 (329)
.++..+.+.++...-.. .++.++++.|..+
T Consensus 283 -D~~~~Y~~~Lkk~Gv~v-~~~~~e~~~H~~~ 312 (336)
T KOG1515|consen 283 -DEGLAYAEKLKKAGVEV-TLIHYEDGFHGFH 312 (336)
T ss_pred -hhhHHHHHHHHHcCCeE-EEEEECCCeeEEE
Confidence 33355666676666666 6778999999533
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.45 E-value=5.7e-12 Score=102.23 Aligned_cols=158 Identities=18% Similarity=0.228 Sum_probs=112.4
Q ss_pred EecCCCCCccEEEEECCC-----CCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCC----CccccchHHHHHHHHHHHh
Q 020199 56 VTPAGKGTFNVILFLHGT-----SLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPS----ATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 56 ~~P~~~~~~p~vi~~HG~-----~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~----~~~~~~~~~~~~~~l~~~~ 126 (329)
|.|.+....|+.|++|-. ..+......++..|.++||.++-+|+||-|.|.+ ...+..|....++|+...-
T Consensus 20 ~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~h 99 (210)
T COG2945 20 YEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARH 99 (210)
T ss_pred cCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhC
Confidence 334445567899999853 3344556788999999999999999999888863 2345678889999987732
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCCCCCCCCCCcccccCcc-CCCCCeEEEecCCC
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGTSKTTGLDPSILSFDSF-DFSIPVTVIGTGLG 204 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~~G 204 (329)
. +.....+.|+|+|+++++.+|.+.+ ....+.+.|..+.. .+..+ ...+|.++|+ |
T Consensus 100 p---------~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~----------dfs~l~P~P~~~lvi~---g 157 (210)
T COG2945 100 P---------DSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAY----------DFSFLAPCPSPGLVIQ---G 157 (210)
T ss_pred C---------CchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCch----------hhhhccCCCCCceeEe---c
Confidence 1 2233588999999999999999986 55555555544311 01111 4578999999 7
Q ss_pred CCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 205 GVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 205 ~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
+.|++++ ....++........++++++++||
T Consensus 158 ~~Ddvv~--------l~~~l~~~~~~~~~~i~i~~a~HF 188 (210)
T COG2945 158 DADDVVD--------LVAVLKWQESIKITVITIPGADHF 188 (210)
T ss_pred Chhhhhc--------HHHHHHhhcCCCCceEEecCCCce
Confidence 7787643 445566666555478999999996
No 86
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.44 E-value=4e-12 Score=121.79 Aligned_cols=115 Identities=13% Similarity=0.038 Sum_probs=77.3
Q ss_pred CCCeeEEEEecCCC-CCccEEEEECCCCCChHHH-----HHHHHHHHhCCcEEEEecCCCCCCCCCCccccchH-H-HHH
Q 020199 48 PPPKPLIIVTPAGK-GTFNVILFLHGTSLSNKSY-----SKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSA-A-EVA 119 (329)
Q Consensus 48 ~~~~~~~l~~P~~~-~~~p~vi~~HG~~~~~~~~-----~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~-~-~~~ 119 (329)
...+.+.-|.|... ...++|+|+|++......+ .+++++|+++||.|+++|++|.+.+. ......+. . .+.
T Consensus 171 ~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~-~~~~~ddY~~~~i~ 249 (532)
T TIGR01838 171 NELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQ-ADKTFDDYIRDGVI 249 (532)
T ss_pred CCcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccc-ccCChhhhHHHHHH
Confidence 55678888888754 3568899999997765544 38999999999999999999988765 33222221 1 122
Q ss_pred HHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHH----HHHhc-c--ccEEEEecc
Q 020199 120 EWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFA----LSLRY-G--FGAVIGLDP 170 (329)
Q Consensus 120 ~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~----~a~~~-~--v~~~v~~~p 170 (329)
+.+....+.. +.+++.++|||+||.++.. ++... + ++++++++.
T Consensus 250 ~al~~v~~~~-------g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t 300 (532)
T TIGR01838 250 AALEVVEAIT-------GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTT 300 (532)
T ss_pred HHHHHHHHhc-------CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEec
Confidence 2222222122 5678999999999998522 33443 3 787777664
No 87
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.40 E-value=1.5e-11 Score=111.80 Aligned_cols=180 Identities=23% Similarity=0.276 Sum_probs=127.9
Q ss_pred CCCeeEEEEec--CCCCCccEEEEECCCCC---ChHHH-HHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHH
Q 020199 48 PPPKPLIIVTP--AGKGTFNVILFLHGTSL---SNKSY-SKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEW 121 (329)
Q Consensus 48 ~~~~~~~l~~P--~~~~~~p~vi~~HG~~~---~~~~~-~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~ 121 (329)
+..+.+.+|.| ....+.|+||++||++. +.... ..+...++..|+.|+++|+|-..... .+..+.+......|
T Consensus 61 ~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-~p~~~~d~~~a~~~ 139 (312)
T COG0657 61 GDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-FPAALEDAYAAYRW 139 (312)
T ss_pred CCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-CCchHHHHHHHHHH
Confidence 45588999999 44556899999999986 33444 34455566689999999998876665 67778888899999
Q ss_pred HHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc------ccEEEEeccCCCCCC-CCCC--------------
Q 020199 122 LPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG------FGAVIGLDPVAGTSK-TTGL-------------- 180 (329)
Q Consensus 122 l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~------v~~~v~~~p~~~~~~-~~~~-------------- 180 (329)
+.+...++ .+|.++|+++|+|.||++++.++.... ..+.+++.|+..... ....
T Consensus 140 l~~~~~~~-----g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~ 214 (312)
T COG0657 140 LRANAAEL-----GIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAI 214 (312)
T ss_pred HHhhhHhh-----CCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHHHH
Confidence 98876544 558999999999999999999887543 577788887754432 0000
Q ss_pred ----------------CCccccc--Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCC
Q 020199 181 ----------------DPSILSF--DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYG 241 (329)
Q Consensus 181 ----------------~~~~~~~--~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g 241 (329)
.+.+.-. ..+ . -.|+++++ ++.|.+.+ +...+.+.+.....+. .+..+++..
T Consensus 215 ~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~---a~~D~l~~----~~~~~a~~L~~agv~~-~~~~~~g~~ 285 (312)
T COG0657 215 LAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQT---AEFDPLRD----EGEAYAERLRAAGVPV-ELRVYPGMI 285 (312)
T ss_pred HHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEe---cCCCcchh----HHHHHHHHHHHcCCeE-EEEEeCCcc
Confidence 0000000 001 2 46899999 77788755 3345666677777777 899999999
Q ss_pred c
Q 020199 242 H 242 (329)
Q Consensus 242 H 242 (329)
|
T Consensus 286 H 286 (312)
T COG0657 286 H 286 (312)
T ss_pred e
Confidence 9
No 88
>COG0400 Predicted esterase [General function prediction only]
Probab=99.38 E-value=1.4e-11 Score=104.07 Aligned_cols=162 Identities=14% Similarity=0.156 Sum_probs=105.4
Q ss_pred CCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCC----------CccccchHHHHHHHHHHHhhhhc
Q 020199 61 KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPS----------ATNELNSAAEVAEWLPQGLQQNL 130 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~ 130 (329)
....|+||++||+|++..++..+.+.+..+ +.++.+. |.-.... ...+..+.......+.++++...
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~r--G~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPR--GPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCC--CCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 345689999999999999988877777766 7777764 3211100 11122222222222333332221
Q ss_pred CCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCCCCCcccccCccCCCCCeEEEecCCCCCcc
Q 020199 131 PENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVAR 208 (329)
Q Consensus 131 ~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~~~~G~~D~ 208 (329)
. ...++.+++.++|+|.|+.+++.+...++ ++++++++|....... ... -.-.+|+|+++ |+.|+
T Consensus 92 ~-~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---~~~------~~~~~pill~h---G~~Dp 158 (207)
T COG0400 92 E-EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---LLP------DLAGTPILLSH---GTEDP 158 (207)
T ss_pred H-HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---ccc------ccCCCeEEEec---cCcCC
Confidence 1 23568899999999999999999999988 8999999876543321 000 02368999999 88899
Q ss_pred cCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 209 CITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
++|.... .+..+.+....... ....++ .||
T Consensus 159 vvp~~~~--~~l~~~l~~~g~~v-~~~~~~-~GH 188 (207)
T COG0400 159 VVPLALA--EALAEYLTASGADV-EVRWHE-GGH 188 (207)
T ss_pred ccCHHHH--HHHHHHHHHcCCCE-EEEEec-CCC
Confidence 9874422 23455666666555 666777 999
No 89
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.36 E-value=4.7e-12 Score=108.22 Aligned_cols=163 Identities=18% Similarity=0.263 Sum_probs=107.4
Q ss_pred EEEECCCCCC---hHHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 67 ILFLHGTSLS---NKSYSKIFDHIAS-HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 67 vi~~HG~~~~---~~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
||++||++.. ......++..+++ .|+.|+.+|+|-..... .+....+..+.++|+.+...++ .+|.++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-~p~~~~D~~~a~~~l~~~~~~~-----~~d~~~i~ 74 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-FPAALEDVKAAYRWLLKNADKL-----GIDPERIV 74 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-TTHHHHHHHHHHHHHHHTHHHH-----TEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-ccccccccccceeeeccccccc-----cccccceE
Confidence 7999999873 3445677777776 89999999999876655 6777888999999998875443 34889999
Q ss_pred EEEeChHHHHHHHHHHhcc------ccEEEEeccCCCC-CCC-C-------CCCCcccc---------------------
Q 020199 143 VMGHSRGGQTAFALSLRYG------FGAVIGLDPVAGT-SKT-T-------GLDPSILS--------------------- 186 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~------v~~~v~~~p~~~~-~~~-~-------~~~~~~~~--------------------- 186 (329)
++|+|.||++++.++.... +++++++.|+... ... . ..+..++.
T Consensus 75 l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (211)
T PF07859_consen 75 LIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPL 154 (211)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTT
T ss_pred Eeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999987532 8999999997543 110 0 00100000
Q ss_pred --c--C-ccCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 187 --F--D-SFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 187 --~--~-~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
+ . .+.--.|+++++ |+.|.+.+.. ....+.+++...+. +++++++..|.
T Consensus 155 ~sp~~~~~~~~~Pp~~i~~---g~~D~l~~~~----~~~~~~L~~~gv~v-~~~~~~g~~H~ 208 (211)
T PF07859_consen 155 ASPLNASDLKGLPPTLIIH---GEDDVLVDDS----LRFAEKLKKAGVDV-ELHVYPGMPHG 208 (211)
T ss_dssp TSGGGSSCCTTCHEEEEEE---ETTSTTHHHH----HHHHHHHHHTT-EE-EEEEETTEETT
T ss_pred cccccccccccCCCeeeec---cccccchHHH----HHHHHHHHHCCCCE-EEEEECCCeEE
Confidence 0 0 111124899999 6668764311 23445555555555 89999999994
No 90
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.36 E-value=4.5e-12 Score=112.89 Aligned_cols=115 Identities=22% Similarity=0.261 Sum_probs=83.5
Q ss_pred CCCeeEEEEec--CCCCCccEEEEECCCCCChHHHHHH----------HHHHHhCCcEEEEecCCCCCCCCCCc-----c
Q 020199 48 PPPKPLIIVTP--AGKGTFNVILFLHGTSLSNKSYSKI----------FDHIASHGFIVVAPQLYTSIPPPSAT-----N 110 (329)
Q Consensus 48 ~~~~~~~l~~P--~~~~~~p~vi~~HG~~~~~~~~~~~----------~~~la~~G~~Vv~~d~~g~~~~~~~~-----~ 110 (329)
|..|.+.||.| ...++.|+|+..++++......... ...|+++||+||..|.||.+.|.+.. .
T Consensus 2 Gv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~ 81 (272)
T PF02129_consen 2 GVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPN 81 (272)
T ss_dssp S-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHH
T ss_pred CCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChh
Confidence 77899999999 7788999999999999754111111 12399999999999999999887321 2
Q ss_pred ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 111 ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+..|..+.++|+..+ .. ...+|+++|.|++|.+++.+|...+ +++++...+.
T Consensus 82 e~~D~~d~I~W~~~Q--pw-------s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~ 135 (272)
T PF02129_consen 82 EAQDGYDTIEWIAAQ--PW-------SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGW 135 (272)
T ss_dssp HHHHHHHHHHHHHHC--TT-------EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-
T ss_pred HHHHHHHHHHHHHhC--CC-------CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccC
Confidence 334677788888773 22 4468999999999999999999665 8888876643
No 91
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.33 E-value=9e-11 Score=96.80 Aligned_cols=182 Identities=12% Similarity=0.111 Sum_probs=116.0
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHH
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQ 124 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~ 124 (329)
++..+...+. ..+...+++++||+-.+... +..+|..|++.|+.++-+|++|.|.+. ...........+++|..
T Consensus 19 ~ne~lvg~lh---~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~-gsf~~Gn~~~eadDL~s 94 (269)
T KOG4667|consen 19 RNEKLVGLLH---ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESE-GSFYYGNYNTEADDLHS 94 (269)
T ss_pred CCchhhccee---ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcC-CccccCcccchHHHHHH
Confidence 3444444332 33556799999999886644 567899999999999999999999987 54444444334455555
Q ss_pred HhhhhcCCCccCCCcc--eEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCC-------------------------CC
Q 020199 125 GLQQNLPENTEANVSL--VAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGT-------------------------SK 176 (329)
Q Consensus 125 ~~~~~~~~~~~~d~~~--i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~-------------------------~~ 176 (329)
.+..+. +..+ -+++|||-||.+++.++..+. ++-++.+...... .+
T Consensus 95 V~q~~s------~~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 95 VIQYFS------NSNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPR 168 (269)
T ss_pred HHHHhc------cCceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcc
Confidence 443332 2233 378999999999999999876 4444433321111 00
Q ss_pred CCCCCCcc----ccc----------CccCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 177 TTGLDPSI----LSF----------DSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 177 ~~~~~~~~----~~~----------~~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
.......+ ... ..+..++|+|-++ |..|.++| .+.+.-|.+...+. .+.+++|+.|
T Consensus 169 kG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvh---Gs~D~IVP------ve~AkefAk~i~nH-~L~iIEgADH 238 (269)
T KOG4667|consen 169 KGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVH---GSEDEIVP------VEDAKEFAKIIPNH-KLEIIEGADH 238 (269)
T ss_pred cCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEe---ccCCceee------chhHHHHHHhccCC-ceEEecCCCc
Confidence 00000000 000 1236689999999 88899988 33445566665566 8999999999
Q ss_pred ccccCC
Q 020199 243 MDILDD 248 (329)
Q Consensus 243 ~~~~d~ 248 (329)
.-...+
T Consensus 239 nyt~~q 244 (269)
T KOG4667|consen 239 NYTGHQ 244 (269)
T ss_pred Cccchh
Confidence 644333
No 92
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.31 E-value=6.8e-11 Score=104.30 Aligned_cols=114 Identities=19% Similarity=0.190 Sum_probs=80.6
Q ss_pred eeEEEE-ecCCCCCccEEEEECCCCCChHHHHHHHHHHHhC-CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhh
Q 020199 51 KPLIIV-TPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASH-GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQ 128 (329)
Q Consensus 51 ~~~~l~-~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~-G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 128 (329)
+...++ ...+..+.|.++++||+.|+...|..++..|++. |-.|+++|.|.+|.+. . ....+...+.+.+..+++.
T Consensus 38 l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp-~-~~~h~~~~ma~dv~~Fi~~ 115 (315)
T KOG2382|consen 38 LAYDSVYSSENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSP-K-ITVHNYEAMAEDVKLFIDG 115 (315)
T ss_pred cceeeeecccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCc-c-ccccCHHHHHHHHHHHHHH
Confidence 333444 3444557899999999999999999999999975 8899999999998885 2 2333455566666666554
Q ss_pred hcCCCccCCCcceEEEEeChHH-HHHHHHHHhcc--ccEEEEec
Q 020199 129 NLPENTEANVSLVAVMGHSRGG-QTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 129 ~~~~~~~~d~~~i~l~GhS~GG-~~a~~~a~~~~--v~~~v~~~ 169 (329)
.... ....++.++|||||| .+++..+...| +..+|..+
T Consensus 116 v~~~---~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D 156 (315)
T KOG2382|consen 116 VGGS---TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVED 156 (315)
T ss_pred cccc---cccCCceecccCcchHHHHHHHHHhcCcccceeEEEe
Confidence 4211 134689999999999 66666666666 44444443
No 93
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.28 E-value=1.4e-10 Score=120.60 Aligned_cols=114 Identities=13% Similarity=0.139 Sum_probs=76.0
Q ss_pred CCCeeEEEEecCCC-----CCccEEEEECCCCCChHHHHH-----HHHHHHhCCcEEEEecCCCCCCCCCCcc--ccchH
Q 020199 48 PPPKPLIIVTPAGK-----GTFNVILFLHGTSLSNKSYSK-----IFDHIASHGFIVVAPQLYTSIPPPSATN--ELNSA 115 (329)
Q Consensus 48 ~~~~~~~l~~P~~~-----~~~p~vi~~HG~~~~~~~~~~-----~~~~la~~G~~Vv~~d~~g~~~~~~~~~--~~~~~ 115 (329)
...+..+-|.|... ...|+|||+||+..+...|+. +...|+++||.|+++|+ | .++ ... ....+
T Consensus 46 ~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~-G--~~~-~~~~~~~~~l 121 (994)
T PRK07868 46 VPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF-G--SPD-KVEGGMERNL 121 (994)
T ss_pred cCcEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC-C--CCC-hhHcCccCCH
Confidence 44566777777642 356899999999998888875 47899999999999996 3 232 111 11334
Q ss_pred HHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc-c--ccEEEEec
Q 020199 116 AEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY-G--FGAVIGLD 169 (329)
Q Consensus 116 ~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~-~--v~~~v~~~ 169 (329)
.+.+..+.+.++.... ...+++.++||||||.+++.++..+ + |+++++++
T Consensus 122 ~~~i~~l~~~l~~v~~----~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~ 174 (994)
T PRK07868 122 ADHVVALSEAIDTVKD----VTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFG 174 (994)
T ss_pred HHHHHHHHHHHHHHHH----hhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEe
Confidence 4444444444432100 0235799999999999999887644 3 78777643
No 94
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.27 E-value=1.4e-09 Score=85.70 Aligned_cols=194 Identities=16% Similarity=0.172 Sum_probs=116.0
Q ss_pred EEEecCCCCCccEEEEECCCCCChH--HHHHHHHHHHhCCcEEEEecCCCC-----CCCCCCccccc-hHHHHHHHHHHH
Q 020199 54 IIVTPAGKGTFNVILFLHGTSLSNK--SYSKIFDHIASHGFIVVAPQLYTS-----IPPPSATNELN-SAAEVAEWLPQG 125 (329)
Q Consensus 54 ~l~~P~~~~~~p~vi~~HG~~~~~~--~~~~~~~~la~~G~~Vv~~d~~g~-----~~~~~~~~~~~-~~~~~~~~l~~~ 125 (329)
.++.|.... .-+||+.||.|++.+ .+...+..|+.+|+.|+-++++.. +... .+.... -..+.+..+.+.
T Consensus 5 ~~~~pag~~-~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rk-Pp~~~~t~~~~~~~~~aql 82 (213)
T COG3571 5 FLFDPAGPA-PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRK-PPPGSGTLNPEYIVAIAQL 82 (213)
T ss_pred cccCCCCCC-CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCC-CcCccccCCHHHHHHHHHH
Confidence 345565443 347899999998654 477889999999999999998332 1000 111111 111122222221
Q ss_pred hhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEec-cCCCCCCCCCCCCcccccCcc-CCCCCeEEEec
Q 020199 126 LQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLD-PVAGTSKTTGLDPSILSFDSF-DFSIPVTVIGT 201 (329)
Q Consensus 126 ~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~-p~~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~ 201 (329)
-.. .+..++++-|+||||-++..++.... |.+++++. |+-.+.+...... +-+ .+++|+||.+
T Consensus 83 ~~~-------l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt-----~HL~gl~tPtli~q- 149 (213)
T COG3571 83 RAG-------LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRT-----EHLTGLKTPTLITQ- 149 (213)
T ss_pred Hhc-------ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchh-----hhccCCCCCeEEee-
Confidence 112 25568999999999999888877653 88988877 4433322211111 223 7899999999
Q ss_pred CCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHH
Q 020199 202 GLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIV 281 (329)
Q Consensus 202 ~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (329)
|+.|..-. ..+.-....+...++++++++.|- -.+...+ . +..-+..-+...+.+
T Consensus 150 --GtrD~fGt--------r~~Va~y~ls~~iev~wl~~adHD----Lkp~k~v----------s-gls~~~hL~~~A~~v 204 (213)
T COG3571 150 --GTRDEFGT--------RDEVAGYALSDPIEVVWLEDADHD----LKPRKLV----------S-GLSTADHLKTLAEQV 204 (213)
T ss_pred --cccccccC--------HHHHHhhhcCCceEEEEeccCccc----ccccccc----------c-cccHHHHHHHHHHHH
Confidence 77787532 222222333344489999999992 1111111 1 234555556778888
Q ss_pred HHHHHH
Q 020199 282 VAFLKD 287 (329)
Q Consensus 282 ~~fl~~ 287 (329)
..|+++
T Consensus 205 a~~~~~ 210 (213)
T COG3571 205 AGWARR 210 (213)
T ss_pred HHHHhh
Confidence 888875
No 95
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.26 E-value=4.2e-11 Score=85.42 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=67.7
Q ss_pred CCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHh
Q 020199 49 PPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 49 ~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 126 (329)
.+|....|.|+.+ ...+|+++||++.....|..+++.|+++||.|+++|+||+|.|.+.+....+..++++++..++
T Consensus 2 ~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 2 TKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred cEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4677888999876 6889999999999999999999999999999999999999999855667778888888877654
No 96
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.26 E-value=1.8e-11 Score=99.88 Aligned_cols=180 Identities=17% Similarity=0.153 Sum_probs=119.7
Q ss_pred cEEEEECCCCCCh-HHHHHHHHHHHhC-CcEEEEecCCCCCCCCCCcc---ccchHHHHHHHHHHHhhhhcCCCccCCCc
Q 020199 65 NVILFLHGTSLSN-KSYSKIFDHIASH-GFIVVAPQLYTSIPPPSATN---ELNSAAEVAEWLPQGLQQNLPENTEANVS 139 (329)
Q Consensus 65 p~vi~~HG~~~~~-~~~~~~~~~la~~-G~~Vv~~d~~g~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~d~~ 139 (329)
..|++++|.-|+. .+|......|-.. -+.++++|.||+|.|. .+. ..+......++..+.++++ +..
T Consensus 43 ~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~Sr-PP~Rkf~~~ff~~Da~~avdLM~aL-------k~~ 114 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSR-PPERKFEVQFFMKDAEYAVDLMEAL-------KLE 114 (277)
T ss_pred ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCC-CCcccchHHHHHHhHHHHHHHHHHh-------CCC
Confidence 3678888887765 4566555544432 4999999999999886 433 3344445555566667666 889
Q ss_pred ceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC--CC----------------CCC----------------------
Q 020199 140 LVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA--GT----------------SKT---------------------- 177 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~--~~----------------~~~---------------------- 177 (329)
++.++|+|-||.+++.+|++++ |..++...... +. ...
T Consensus 115 ~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD 194 (277)
T KOG2984|consen 115 PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVD 194 (277)
T ss_pred CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHH
Confidence 9999999999999999999987 44444433211 11 000
Q ss_pred -----CCCCCcccccCcc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCc
Q 020199 178 -----TGLDPSILSFDSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPS 251 (329)
Q Consensus 178 -----~~~~~~~~~~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~ 251 (329)
......-+..-.+ ++++|+||++ |+.|++++. .+..++....+.+ .+.+++.++|.-.+
T Consensus 195 ~v~qf~~~~dG~fCr~~lp~vkcPtli~h---G~kDp~~~~------~hv~fi~~~~~~a-~~~~~peGkHn~hL----- 259 (277)
T KOG2984|consen 195 VVDQFHSFCDGRFCRLVLPQVKCPTLIMH---GGKDPFCGD------PHVCFIPVLKSLA-KVEIHPEGKHNFHL----- 259 (277)
T ss_pred HHHHHhhcCCCchHhhhcccccCCeeEee---CCcCCCCCC------CCccchhhhcccc-eEEEccCCCcceee-----
Confidence 0000000000123 8999999999 888998762 3556677788888 89999999995332
Q ss_pred cchhcccccccccCCCCCchhHHHHhhHHHHHHHHH
Q 020199 252 DVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKD 287 (329)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 287 (329)
++.+..+.++..||+.
T Consensus 260 --------------------rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 260 --------------------RYAKEFNKLVLDFLKS 275 (277)
T ss_pred --------------------echHHHHHHHHHHHhc
Confidence 2336778889999875
No 97
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=1.4e-10 Score=116.15 Aligned_cols=204 Identities=17% Similarity=0.086 Sum_probs=131.2
Q ss_pred CCCeeEEEEecC---CCCCccEEEEECCCCCChHH-----HHHHHHHHHhCCcEEEEecCCCCCCCCCCc----------
Q 020199 48 PPPKPLIIVTPA---GKGTFNVILFLHGTSLSNKS-----YSKIFDHIASHGFIVVAPQLYTSIPPPSAT---------- 109 (329)
Q Consensus 48 ~~~~~~~l~~P~---~~~~~p~vi~~HG~~~~~~~-----~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~---------- 109 (329)
+-...+.+..|. ..+++|+++.+||+.++... ..+-...+...|++|+.+|.||.+..+ ..
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G-~~~~~~~~~~lG 585 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYG-WDFRSALPRNLG 585 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcc-hhHHHHhhhhcC
Confidence 667778888896 45579999999999973322 122223466789999999999998775 22
Q ss_pred -cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc---ccEEEEeccCCCCCCCCCCC----
Q 020199 110 -NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLDPVAGTSKTTGLD---- 181 (329)
Q Consensus 110 -~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~p~~~~~~~~~~~---- 181 (329)
.++.|....+..+.+ .. .+|.++|+++|+|+||++++.++...+ ++|.+.+.|+.....+....
T Consensus 586 ~~ev~D~~~~~~~~~~-------~~-~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~tery 657 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLK-------LP-FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERY 657 (755)
T ss_pred CcchHHHHHHHHHHHh-------cc-cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhh
Confidence 122233333332222 12 669999999999999999999999886 78889999987653211111
Q ss_pred ----Cc-cccc------Ccc-CCCCCe-EEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCC
Q 020199 182 ----PS-ILSF------DSF-DFSIPV-TVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDD 248 (329)
Q Consensus 182 ----~~-~~~~------~~~-~i~~P~-Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~ 248 (329)
.. ...+ ... .++.|. |++| |+.|+-+... ......+.++...-+. +++++++.+|..
T Consensus 658 mg~p~~~~~~y~e~~~~~~~~~~~~~~~LliH---Gt~DdnVh~q--~s~~~~~aL~~~gv~~-~~~vypde~H~i---- 727 (755)
T KOG2100|consen 658 MGLPSENDKGYEESSVSSPANNIKTPKLLLIH---GTEDDNVHFQ--QSAILIKALQNAGVPF-RLLVYPDENHGI---- 727 (755)
T ss_pred cCCCccccchhhhccccchhhhhccCCEEEEE---cCCcCCcCHH--HHHHHHHHHHHCCCce-EEEEeCCCCccc----
Confidence 00 0001 122 566676 8999 7778765411 1112334455566665 899999999931
Q ss_pred CCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHc
Q 020199 249 NPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~ 290 (329)
........+...+..||+..+.
T Consensus 728 --------------------s~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 728 --------------------SYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred --------------------ccccchHHHHHHHHHHHHHHcC
Confidence 2223335566678899985554
No 98
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.25 E-value=3.3e-10 Score=105.53 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=72.2
Q ss_pred CCCCccEEEEECCCCCChHH-------------HHHHH---HHHHhCCcEEEEecCCCCCCCC-------C---------
Q 020199 60 GKGTFNVILFLHGTSLSNKS-------------YSKIF---DHIASHGFIVVAPQLYTSIPPP-------S--------- 107 (329)
Q Consensus 60 ~~~~~p~vi~~HG~~~~~~~-------------~~~~~---~~la~~G~~Vv~~d~~g~~~~~-------~--------- 107 (329)
...+.++||++|++.++... |..+. ..|--.-|-|+++|..|.+.+. +
T Consensus 52 n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg 131 (389)
T PRK06765 52 NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTG 131 (389)
T ss_pred CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCC
Confidence 34456899999999996532 33332 1233335999999999875311 0
Q ss_pred C----ccccchHHHHHHHHHHHhhhhcCCCccCCCcceE-EEEeChHHHHHHHHHHhcc--ccEEEEec
Q 020199 108 A----TNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA-VMGHSRGGQTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 108 ~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~-l~GhS~GG~~a~~~a~~~~--v~~~v~~~ 169 (329)
. .+...++.+..+.+...++++ +.+++. ++||||||.+++.+|.++| ++++|+++
T Consensus 132 ~~~~~~fP~~t~~d~~~~~~~ll~~l-------gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 132 KPYGMDFPVVTILDFVRVQKELIKSL-------GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CccCCCCCcCcHHHHHHHHHHHHHHc-------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 0 122346777777777777665 667886 9999999999999999999 77777764
No 99
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.24 E-value=6.1e-10 Score=95.05 Aligned_cols=114 Identities=25% Similarity=0.384 Sum_probs=72.7
Q ss_pred eeEEEEecCCC--CCccEEEEECCCCCChHHHHHH--HHHHHh-CCcEEEEecCCCCCCCCCC--------ccccchHHH
Q 020199 51 KPLIIVTPAGK--GTFNVILFLHGTSLSNKSYSKI--FDHIAS-HGFIVVAPQLYTSIPPPSA--------TNELNSAAE 117 (329)
Q Consensus 51 ~~~~l~~P~~~--~~~p~vi~~HG~~~~~~~~~~~--~~~la~-~G~~Vv~~d~~g~~~~~~~--------~~~~~~~~~ 117 (329)
|...||.|... ++.|+||++||.+++.+.+... ...||+ +||+|+.|+.........+ .....+..
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~- 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA- 79 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh-
Confidence 35678999843 3579999999999998775432 234554 6999999986321111000 00111221
Q ss_pred HHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEec
Q 020199 118 VAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 118 ~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~ 169 (329)
.+...++.+ .....+|.+||++.|+|.||.++..++..+| |.++....
T Consensus 80 ---~i~~lv~~v-~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~s 129 (220)
T PF10503_consen 80 ---FIAALVDYV-AARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVS 129 (220)
T ss_pred ---hHHHHHHhH-hhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeec
Confidence 122212111 1235779999999999999999999999998 66655444
No 100
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.22 E-value=1.1e-09 Score=110.09 Aligned_cols=90 Identities=19% Similarity=0.181 Sum_probs=63.8
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCC-----ccccchHHHHHHHHHHHhhhhcCC------CccCCCcceEEEEeChHH
Q 020199 82 KIFDHIASHGFIVVAPQLYTSIPPPSA-----TNELNSAAEVAEWLPQGLQQNLPE------NTEANVSLVAVMGHSRGG 150 (329)
Q Consensus 82 ~~~~~la~~G~~Vv~~d~~g~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~------~~~~d~~~i~l~GhS~GG 150 (329)
.+.++|+++||+|+..|.||.+.|.+. ..+..+..+.++|+.......... ...=-..+|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 456889999999999999999888742 233456777888887532110000 000014699999999999
Q ss_pred HHHHHHHHhcc--ccEEEEeccC
Q 020199 151 QTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 151 ~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.+++.+|...+ ++++|...+.
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCC
Confidence 99999988765 8888876654
No 101
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.21 E-value=1.9e-10 Score=107.49 Aligned_cols=109 Identities=14% Similarity=0.123 Sum_probs=74.7
Q ss_pred CCccEEEEECCCCCCh--HHHHH-HHHHHHh--CCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccC
Q 020199 62 GTFNVILFLHGTSLSN--KSYSK-IFDHIAS--HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEA 136 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~--~~~~~-~~~~la~--~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 136 (329)
...|++|++||++++. ..|.. ++..|.. ..|.|+++|++|.+.+. ..........+.+.+...++.+... ..+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~-y~~a~~~t~~vg~~la~lI~~L~~~-~gl 116 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH-YPTSAAYTKLVGKDVAKFVNWMQEE-FNY 116 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC-CccccccHHHHHHHHHHHHHHHHHh-hCC
Confidence 3579999999998754 33543 5665543 25999999999987665 3322233333334444444332211 124
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
+.+++.++||||||++|..++...+ |.+++++||..
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 6789999999999999999988776 99999999965
No 102
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.20 E-value=9.8e-11 Score=104.24 Aligned_cols=110 Identities=23% Similarity=0.275 Sum_probs=73.1
Q ss_pred CCccEEEEECCCCCCh-HHH-HHHHHHHH-hCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCC
Q 020199 62 GTFNVILFLHGTSLSN-KSY-SKIFDHIA-SHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANV 138 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~-~~~-~~~~~~la-~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~ 138 (329)
.+.|++|++||++++. ..| ..+++.+. ..+|.|+++|+++...+. ............+.+...++.+.. ...++.
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~-~~g~~~ 111 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVD-NTGLSL 111 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHH-hcCCCh
Confidence 4578999999999877 444 34555444 468999999998863332 111222222222333333332211 112366
Q ss_pred cceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCC
Q 020199 139 SLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAG 173 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~ 173 (329)
++|.++|||+||+++..++...+ +++++.+||...
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 79999999999999999998877 999999998753
No 103
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.19 E-value=9.8e-11 Score=100.54 Aligned_cols=139 Identities=15% Similarity=0.177 Sum_probs=95.1
Q ss_pred cEEEEecCCCCCCCCC---CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEE
Q 020199 92 FIVVAPQLYTSIPPPS---ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVI 166 (329)
Q Consensus 92 ~~Vv~~d~~g~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v 166 (329)
|.|+++|.||.+.+.. .........+..+.+...++.+ ..+++.++||||||.+++.++..+| +++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-------GIKKINLVGHSMGGMLALEYAAQYPERVKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-------TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-------CCCCeEEEEECCChHHHHHHHHHCchhhcCcE
Confidence 7899999999999872 2233334555555555555554 5567999999999999999999999 99999
Q ss_pred EeccC---------------CCC-----------------------------------------C---CCCC-CCCc---
Q 020199 167 GLDPV---------------AGT-----------------------------------------S---KTTG-LDPS--- 183 (329)
Q Consensus 167 ~~~p~---------------~~~-----------------------------------------~---~~~~-~~~~--- 183 (329)
++++. ... . .... ....
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 74 LISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDN 153 (230)
T ss_dssp EESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred EEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhh
Confidence 99885 000 0 0000 0000
Q ss_pred -cc---cc-------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccC
Q 020199 184 -IL---SF-------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILD 247 (329)
Q Consensus 184 -~~---~~-------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d 247 (329)
.. .. ..+ ++++|+|+++ |+.|.++|+. ....+.+..+.. ++++++++||+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~i~~p~l~i~---~~~D~~~p~~------~~~~~~~~~~~~-~~~~~~~~GH~~~~~ 219 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSPALSNIKVPTLIIW---GEDDPLVPPE------SSEQLAKLIPNS-QLVLIEGSGHFAFLE 219 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSEEEEEE---ETTCSSSHHH------HHHHHHHHSTTE-EEEEETTCCSTHHHH
T ss_pred hccccccccccccccccccccCCCeEEEE---eCCCCCCCHH------HHHHHHHhcCCC-EEEECCCCChHHHhc
Confidence 00 00 222 8999999999 7779988843 344456666666 899999999987654
No 104
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.10 E-value=1.1e-09 Score=90.20 Aligned_cols=128 Identities=19% Similarity=0.306 Sum_probs=89.7
Q ss_pred CCCCeeEEEEecCC---CCCccEEEEECCCCCChHHHH---HHHHHHHhCCcEEEEecC--CCCCCCCC---Cc------
Q 020199 47 PPPPKPLIIVTPAG---KGTFNVILFLHGTSLSNKSYS---KIFDHIASHGFIVVAPQL--YTSIPPPS---AT------ 109 (329)
Q Consensus 47 ~~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~~~~---~~~~~la~~G~~Vv~~d~--~g~~~~~~---~~------ 109 (329)
....+++-||.|.. .++.|+++++.|+....+.+. .+-+..+++|++||.||. ||...... ..
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 37789999999973 345899999999999777653 234455668999999997 55321110 00
Q ss_pred -------cccchHHHHHHHHHHHhhhhcC-CCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 110 -------NELNSAAEVAEWLPQGLQQNLP-ENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 110 -------~~~~~~~~~~~~l~~~~~~~~~-~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
.....--.+-+++.+.+-+.+. ....+|..++++.||||||+.|+..+.+++ ++.+-.+.|..++
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 0011112455666666655555 456789999999999999999999888887 7777777776655
No 105
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.6e-09 Score=102.19 Aligned_cols=192 Identities=15% Similarity=0.140 Sum_probs=120.3
Q ss_pred EEEEeecCCCCCCCCCeeEEEEecCC---CCCccEEEEECCCCCChHH---HH----HHHHHHHhCCcEEEEecCCCCCC
Q 020199 35 KRITLETSSPSSPPPPKPLIIVTPAG---KGTFNVILFLHGTSLSNKS---YS----KIFDHIASHGFIVVAPQLYTSIP 104 (329)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~~---~~----~~~~~la~~G~~Vv~~d~~g~~~ 104 (329)
+.+++.... +..+.+-||+|.. .+++|+++++-|+.+-... |. --...||+.||+|+.+|.||+..
T Consensus 614 eif~fqs~t----g~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~h 689 (867)
T KOG2281|consen 614 EIFSFQSKT----GLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAH 689 (867)
T ss_pred hheeeecCC----CcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccc
Confidence 334445543 7889999999973 3568999999998873221 11 12457999999999999999754
Q ss_pred CCC----------CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 105 PPS----------ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 105 ~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
.+. ..-++.|.-+.++++.+.. +-+|.++|++-|+|+||++++....++| +++.|+-.|+.
T Consensus 690 RGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~-------gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 690 RGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT-------GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred cchhhHHHHhhccCeeeehhhHHHHHHHHHhc-------CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 431 1112334444555554432 3559999999999999999999999999 77777666654
Q ss_pred CC--------CCCCCCCC-c--cccc-------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCee
Q 020199 173 GT--------SKTTGLDP-S--ILSF-------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRA 233 (329)
Q Consensus 173 ~~--------~~~~~~~~-~--~~~~-------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~ 233 (329)
.= +++-..+. . .+.. +.+ .=....|++| |-.|.-+--+.. ......+.+..++- +
T Consensus 763 ~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvH---GliDENVHF~Ht--s~Lvs~lvkagKpy-e 836 (867)
T KOG2281|consen 763 DWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVH---GLIDENVHFAHT--SRLVSALVKAGKPY-E 836 (867)
T ss_pred eeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEe---cccccchhhhhH--HHHHHHHHhCCCce-E
Confidence 32 11111110 0 1111 233 2234578999 766753221100 11123345556666 7
Q ss_pred EEEeccCCcc
Q 020199 234 HFVATDYGHM 243 (329)
Q Consensus 234 ~~~~~~~gH~ 243 (329)
+.++|+.-|.
T Consensus 837 L~IfP~ERHs 846 (867)
T KOG2281|consen 837 LQIFPNERHS 846 (867)
T ss_pred EEEccccccc
Confidence 9999999994
No 106
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.09 E-value=1.3e-09 Score=89.79 Aligned_cols=147 Identities=15% Similarity=0.186 Sum_probs=87.1
Q ss_pred EEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 67 ILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 67 vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
|+++||++++... +.++.+.|... +.|-.++. .. .+.++..+.+.+.+... + +++.++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~---~~--------P~~~~W~~~l~~~i~~~-------~-~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW---DN--------PDLDEWVQALDQAIDAI-------D-EPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-----TS----------HHHHHHHHHHCCHC--------T-TTEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc---CC--------CCHHHHHHHHHHHHhhc-------C-CCeEEE
Confidence 6899999997643 67888889777 77777665 11 23444444555544332 3 469999
Q ss_pred EeChHHHHHHHHHH-hcc--ccEEEEeccCCCCCCCCCCCCcccccCcc---CCCCCeEEEecCCCCCcccCccCCCCCC
Q 020199 145 GHSRGGQTAFALSL-RYG--FGAVIGLDPVAGTSKTTGLDPSILSFDSF---DFSIPVTVIGTGLGGVARCITACAPEGA 218 (329)
Q Consensus 145 GhS~GG~~a~~~a~-~~~--v~~~v~~~p~~~~~~~~~~~~~~~~~~~~---~i~~P~Lii~~~~G~~D~~~~~~~~~~~ 218 (329)
|||+|+.+++.++. ... |++++++.|+..... ....+....+... .+.+|.+++. .++|+++|..
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~-~~~~~~~~~f~~~p~~~l~~~~~via---S~nDp~vp~~----- 131 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP-EPFPPELDGFTPLPRDPLPFPSIVIA---SDNDPYVPFE----- 131 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH-HCCTCGGCCCTTSHCCHHHCCEEEEE---ETTBSSS-HH-----
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc-cchhhhccccccCcccccCCCeEEEE---cCCCCccCHH-----
Confidence 99999999999994 332 999999999875311 1112222122111 5567889999 5559887732
Q ss_pred CHHHHHHHccCCCeeEEEeccCCcccc
Q 020199 219 NHEEFFNRCKNSSRAHFVATDYGHMDI 245 (329)
Q Consensus 219 ~~~~~~~~~~~~~k~~~~~~~~gH~~~ 245 (329)
....+.+.- .. .++.++++||+.-
T Consensus 132 -~a~~~A~~l-~a-~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 132 -RAQRLAQRL-GA-ELIILGGGGHFNA 155 (171)
T ss_dssp -HHHHHHHHH-T--EEEEETS-TTSSG
T ss_pred -HHHHHHHHc-CC-CeEECCCCCCccc
Confidence 333333332 34 7899999999643
No 107
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.09 E-value=5.6e-10 Score=95.59 Aligned_cols=166 Identities=17% Similarity=0.246 Sum_probs=84.8
Q ss_pred chHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCCCC----CCC--------
Q 020199 113 NSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGTSK----TTG-------- 179 (329)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~----~~~-------- 179 (329)
...+..++||.+ ...++.++|+++|.|.||-+|+.+|..++ |+++|.++|...... ...
T Consensus 4 Eyfe~Ai~~L~~--------~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~ 75 (213)
T PF08840_consen 4 EYFEEAIDWLKS--------HPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYL 75 (213)
T ss_dssp HHHHHHHHHHHC--------STTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE---
T ss_pred HHHHHHHHHHHh--------CCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcC
Confidence 456667777765 23457789999999999999999999998 999998886532210 000
Q ss_pred ---------CCCccc--c-----------cC-c--c-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCC-Ce
Q 020199 180 ---------LDPSIL--S-----------FD-S--F-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNS-SR 232 (329)
Q Consensus 180 ---------~~~~~~--~-----------~~-~--~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~k 232 (329)
..+... . .+ . . +++.|+|+|. |+.|.+.|...... ...+.+++...+ .-
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~---g~dD~~WpS~~~a~-~i~~rL~~~~~~~~~ 151 (213)
T PF08840_consen 76 PFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLIS---GEDDQIWPSSEMAE-QIEERLKAAGFPHNV 151 (213)
T ss_dssp -B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEE---ETT-SSS-HHHHHH-HHHHHHHCTT-----
T ss_pred CcChhhceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEE---eCCCCccchHHHHH-HHHHHHHHhCCCCcc
Confidence 000000 0 01 1 2 7899999999 77799877542111 011223333333 22
Q ss_pred eEEEeccCCcccccCCCCccchhcc-cccccccCCC--CCchhHHHHhhHHHHHHHHHHHc
Q 020199 233 AHFVATDYGHMDILDDNPSDVKSWA-LSKYFCKNGN--ESRDPMRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 233 ~~~~~~~~gH~~~~d~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~fl~~~L~ 290 (329)
+.+.++++||+......+....... +......-|+ .....+++.....++.||+++|.
T Consensus 152 ~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 152 EHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred eEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6778999999765433221111100 0000011221 23455778899999999999985
No 108
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.07 E-value=6.3e-10 Score=91.17 Aligned_cols=181 Identities=14% Similarity=0.178 Sum_probs=109.4
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChH---HHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNK---SYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQ 124 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~---~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~ 124 (329)
+..-.+++|.|.. ..|+.||+||+.+... .-...+.-+.++||.|+++++--......-...+.+.-..++|+.+
T Consensus 53 ~g~q~VDIwg~~~--~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk 130 (270)
T KOG4627|consen 53 GGRQLVDIWGSTN--QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILK 130 (270)
T ss_pred CCceEEEEecCCC--CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHH
Confidence 5588899999964 3679999999876433 3335566677899999998753322111011223334444555544
Q ss_pred HhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc---ccEEEEeccCCCC------CCCC----CCC-Cccccc--C
Q 020199 125 GLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLDPVAGT------SKTT----GLD-PSILSF--D 188 (329)
Q Consensus 125 ~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~p~~~~------~~~~----~~~-~~~~~~--~ 188 (329)
... +.+.+.+.|||.|+++++.+..+.. |.+++++...... .... ... ...... .
T Consensus 131 ~~~---------n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~ 201 (270)
T KOG4627|consen 131 YTE---------NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLW 201 (270)
T ss_pred hcc---------cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHH
Confidence 221 4467999999999999999887643 5554444322111 0000 000 000000 1
Q ss_pred cc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCC
Q 020199 189 SF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDN 249 (329)
Q Consensus 189 ~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~ 249 (329)
.. .++.|+|++.+.. | .|...++.+-|......+ .+-.+++.+|+..+++.
T Consensus 202 ~~~~v~~~ilVv~~~~---e------spklieQnrdf~~q~~~a-~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 202 EYTDVTVWILVVAAEH---E------SPKLIEQNRDFADQLRKA-SFTLFKNYDHYDIIEET 253 (270)
T ss_pred HhcCceeeeeEeeecc---c------CcHHHHhhhhHHHHhhhc-ceeecCCcchhhHHHHh
Confidence 22 7789999999444 3 444455666566665566 89999999998776543
No 109
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.07 E-value=1.9e-09 Score=106.81 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=70.9
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCC---------ccc-------------cchHHHHHHH
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSA---------TNE-------------LNSAAEVAEW 121 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~---------~~~-------------~~~~~~~~~~ 121 (329)
.|+|||+||++++...|..+++.|+++||.|+++|+||+|.+... ... .+.+++.+.+
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 579999999999999999999999999999999999999888422 000 1244555555
Q ss_pred HHHHhhhhc------C---CCccCCCcceEEEEeChHHHHHHHHHHh
Q 020199 122 LPQGLQQNL------P---ENTEANVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 122 l~~~~~~~~------~---~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
+......+. . .....+..++.++||||||.+++.++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 544333321 0 0112466799999999999999998875
No 110
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.03 E-value=9.7e-09 Score=88.93 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=93.8
Q ss_pred CCCeeEEEEecCC---CCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHH
Q 020199 48 PPPKPLIIVTPAG---KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQ 124 (329)
Q Consensus 48 ~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~ 124 (329)
++.+.+...|-.. .....+||=+||..|+..++.++...|.+.|..++.+++||.+...+.+.....-.+...++..
T Consensus 16 ~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ 95 (297)
T PF06342_consen 16 GKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNA 95 (297)
T ss_pred CceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHH
Confidence 5555555444332 2234589999999999999999999999999999999999998887444444455566667666
Q ss_pred HhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhccccEEEEeccCCC
Q 020199 125 GLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAG 173 (329)
Q Consensus 125 ~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~ 173 (329)
.++++ .++ +++..+|||.|+-.|+.++..+|..++++++|...
T Consensus 96 ll~~l-----~i~-~~~i~~gHSrGcenal~la~~~~~~g~~lin~~G~ 138 (297)
T PF06342_consen 96 LLDEL-----GIK-GKLIFLGHSRGCENALQLAVTHPLHGLVLINPPGL 138 (297)
T ss_pred HHHHc-----CCC-CceEEEEeccchHHHHHHHhcCccceEEEecCCcc
Confidence 66665 233 68999999999999999999999889999998654
No 111
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=6e-09 Score=90.46 Aligned_cols=116 Identities=21% Similarity=0.303 Sum_probs=78.5
Q ss_pred CCCeeEEEEecCC-CCCccEEEEECCCCCChHHHHHHH--HHHHh-CCcEEEEecCCC-CCCCCC---------Cccccc
Q 020199 48 PPPKPLIIVTPAG-KGTFNVILFLHGTSLSNKSYSKIF--DHIAS-HGFIVVAPQLYT-SIPPPS---------ATNELN 113 (329)
Q Consensus 48 ~~~~~~~l~~P~~-~~~~p~vi~~HG~~~~~~~~~~~~--~~la~-~G~~Vv~~d~~g-~~~~~~---------~~~~~~ 113 (329)
+......+|.|.. +...|+||++||.+++...+.... +.||. .||.|+.||-.. ...... .....+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~d 123 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVD 123 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCcc
Confidence 7788899999984 334599999999999887766554 55554 699999997532 221110 122333
Q ss_pred hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEe
Q 020199 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGL 168 (329)
Q Consensus 114 ~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~ 168 (329)
++..+.+.+...+ .+..+|..+|++.|.|.||.++..++..+| +.++-.+
T Consensus 124 dVgflr~lva~l~-----~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~V 175 (312)
T COG3509 124 DVGFLRALVAKLV-----NEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPV 175 (312)
T ss_pred HHHHHHHHHHHHH-----HhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeee
Confidence 3333333332222 245789999999999999999999999988 4444333
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.97 E-value=1.8e-08 Score=93.13 Aligned_cols=131 Identities=19% Similarity=0.194 Sum_probs=95.0
Q ss_pred cCCCCceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHHHH------HHHHHHHhCCcEEEEecCC
Q 020199 27 FTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYS------KIFDHIASHGFIVVAPQLY 100 (329)
Q Consensus 27 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~------~~~~~la~~G~~Vv~~d~~ 100 (329)
.+.-.|.++.-.++..| |.-+... -.|...+++|+|++.||...++..|. .++=.|+..||.|..-+.|
T Consensus 41 i~~~gy~~E~h~V~T~D----gYiL~lh-RIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R 115 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTED----GYILTLH-RIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR 115 (403)
T ss_pred HHHcCCceEEEEEEccC----CeEEEEe-eecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc
Confidence 34445778888888875 6644443 34554478999999999999887763 5677899999999999999
Q ss_pred CCCCCCC---------Ccc--------ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--
Q 020199 101 TSIPPPS---------ATN--------ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-- 161 (329)
Q Consensus 101 g~~~~~~---------~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-- 161 (329)
|...+.. ..+ ...|+.+.+|++.+.. ..+++..+|||.|+...+.++...|
T Consensus 116 Gn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T----------~~~kl~yvGHSQGtt~~fv~lS~~p~~ 185 (403)
T KOG2624|consen 116 GNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT----------GQEKLHYVGHSQGTTTFFVMLSERPEY 185 (403)
T ss_pred CcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc----------cccceEEEEEEccchhheehhcccchh
Confidence 9755431 111 1235566666665533 4578999999999999999888876
Q ss_pred ---ccEEEEeccCC
Q 020199 162 ---FGAVIGLDPVA 172 (329)
Q Consensus 162 ---v~~~v~~~p~~ 172 (329)
|+..+++.|..
T Consensus 186 ~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 186 NKKIKSFIALAPAA 199 (403)
T ss_pred hhhhheeeeecchh
Confidence 77777777765
No 113
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.95 E-value=5.7e-09 Score=90.24 Aligned_cols=149 Identities=19% Similarity=0.232 Sum_probs=93.2
Q ss_pred CCCCeeEEEEecCC---CCCc-cEEEEECCCCCChHHHH-HHHH-------HHHhCCcEEEEecCCC-CCCCCCCccccc
Q 020199 47 PPPPKPLIIVTPAG---KGTF-NVILFLHGTSLSNKSYS-KIFD-------HIASHGFIVVAPQLYT-SIPPPSATNELN 113 (329)
Q Consensus 47 ~~~~~~~~l~~P~~---~~~~-p~vi~~HG~~~~~~~~~-~~~~-------~la~~G~~Vv~~d~~g-~~~~~~~~~~~~ 113 (329)
.+..+...+|.|++ .+++ |+|+|+||.|....+.. .+.. ..-+.+|-|++|.+-- ...++ .....
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e--~~t~~ 247 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE--EKTLL 247 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccc--cccch
Confidence 58899999999962 3455 99999999998665432 1111 1112245555555311 00111 11112
Q ss_pred hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCC-CCCCCCCCCcccccCcc
Q 020199 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAG-TSKTTGLDPSILSFDSF 190 (329)
Q Consensus 114 ~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~-~~~~~~~~~~~~~~~~~ 190 (329)
.....++.+. +.+.....+|.+||.++|.|+||..++.++.++| +.+.+.+..... .... ..
T Consensus 248 ~l~~~idli~----~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv-----------~~ 312 (387)
T COG4099 248 YLIEKIDLIL----EVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLV-----------RT 312 (387)
T ss_pred hHHHHHHHHH----HHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhh-----------hh
Confidence 2233344433 3344457889999999999999999999999999 888887775443 1110 00
Q ss_pred CCCCCeEEEecCCCCCcccCccCCC
Q 020199 191 DFSIPVTVIGTGLGGVARCITACAP 215 (329)
Q Consensus 191 ~i~~P~Lii~~~~G~~D~~~~~~~~ 215 (329)
.-+.|+-++| +..|.++|-...
T Consensus 313 lk~~piWvfh---s~dDkv~Pv~nS 334 (387)
T COG4099 313 LKKAPIWVFH---SSDDKVIPVSNS 334 (387)
T ss_pred hccCceEEEE---ecCCCccccCcc
Confidence 2368999999 666988775443
No 114
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.95 E-value=3.3e-08 Score=82.43 Aligned_cols=143 Identities=22% Similarity=0.231 Sum_probs=89.6
Q ss_pred EEEECCCCCChHH--HHHHHHHHHhCCc--EEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 67 ILFLHGTSLSNKS--YSKIFDHIASHGF--IVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 67 vi~~HG~~~~~~~--~~~~~~~la~~G~--~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
|+++||+..+... ...+.++++++|. .+..++.+. .....++.+.+.+.+. ..+.+.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~------------~p~~a~~~l~~~i~~~-------~~~~~~ 62 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP------------FPEEAIAQLEQLIEEL-------KPENVV 62 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc------------CHHHHHHHHHHHHHhC-------CCCCeE
Confidence 7999999987654 4566778888764 344444332 2233445555555554 344599
Q ss_pred EEEeChHHHHHHHHHHhccccEEEEeccCCCCCC------CCC---CCCccccc--------Cc-----cCCCCCeEEEe
Q 020199 143 VMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSK------TTG---LDPSILSF--------DS-----FDFSIPVTVIG 200 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~~~------~~~---~~~~~~~~--------~~-----~~i~~P~Lii~ 200 (329)
++|.|+||..|..++.++.+++ |+++|...+.. ... .....+.. +. ..-..+++++.
T Consensus 63 liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll 141 (187)
T PF05728_consen 63 LIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLL 141 (187)
T ss_pred EEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEE
Confidence 9999999999999999998888 77888765410 000 00000000 11 13346899999
Q ss_pred cCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 201 TGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 201 ~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
++.|.+.+ +.+.+....+. ..++.+|++|
T Consensus 142 ---~~~DEvLd--------~~~a~~~~~~~--~~~i~~ggdH 170 (187)
T PF05728_consen 142 ---QTGDEVLD--------YREAVAKYRGC--AQIIEEGGDH 170 (187)
T ss_pred ---ecCCcccC--------HHHHHHHhcCc--eEEEEeCCCC
Confidence 77788744 45555555543 3456688899
No 115
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=2.8e-08 Score=84.41 Aligned_cols=92 Identities=18% Similarity=0.134 Sum_probs=74.0
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
+..+-++.+|=.||+...|+.+...|-.. +.++.+++||.+.-- ......+++.+++.+...+... . -..+.
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~-~ep~~~di~~Lad~la~el~~~-----~-~d~P~ 76 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRF-GEPLLTDIESLADELANELLPP-----L-LDAPF 76 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCccccc-CCcccccHHHHHHHHHHHhccc-----c-CCCCe
Confidence 44677888999999999999999988664 999999999987765 5556778888888888766421 0 23579
Q ss_pred EEEEeChHHHHHHHHHHhcc
Q 020199 142 AVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~ 161 (329)
+++||||||++|..+|.+..
T Consensus 77 alfGHSmGa~lAfEvArrl~ 96 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLE 96 (244)
T ss_pred eecccchhHHHHHHHHHHHH
Confidence 99999999999999998764
No 116
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.92 E-value=5.2e-08 Score=91.38 Aligned_cols=123 Identities=17% Similarity=0.198 Sum_probs=80.2
Q ss_pred CCCCeeEEEEecCC--CCCccEEEEECCCCCChH-HHHHHHHHHHhCC----cEEEEecCCCCCCCCCCccccchHHHHH
Q 020199 47 PPPPKPLIIVTPAG--KGTFNVILFLHGTSLSNK-SYSKIFDHIASHG----FIVVAPQLYTSIPPPSATNELNSAAEVA 119 (329)
Q Consensus 47 ~~~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~-~~~~~~~~la~~G----~~Vv~~d~~g~~~~~~~~~~~~~~~~~~ 119 (329)
.+....++||.|.. ..++|+|+++||...... .....++.|...| .++|.+|..... . +.........+.
T Consensus 190 Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~-R~~el~~~~~f~ 266 (411)
T PRK10439 190 LGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--H-RSQELPCNADFW 266 (411)
T ss_pred cCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--c-ccccCCchHHHH
Confidence 47889999999974 357899999999654322 1334555666666 457888763211 1 111222233444
Q ss_pred HHHHHHhhhhcCCC--ccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 120 EWLPQGLQQNLPEN--TEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 120 ~~l~~~~~~~~~~~--~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
+++.+.+...++.. ...|.++.+|+|+||||..|+.++..+| +.+++.+++..
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 44444333222221 2236778999999999999999999999 89999988753
No 117
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.89 E-value=8.2e-08 Score=91.68 Aligned_cols=115 Identities=11% Similarity=0.017 Sum_probs=76.1
Q ss_pred CCCeeEEEEecCCC-CCccEEEEECCCCCChHHH-----HHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHH
Q 020199 48 PPPKPLIIVTPAGK-GTFNVILFLHGTSLSNKSY-----SKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEW 121 (329)
Q Consensus 48 ~~~~~~~l~~P~~~-~~~p~vi~~HG~~~~~~~~-----~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~ 121 (329)
...+.+.-|.|... ...++|++++.+-....-+ .++.++|.++||.|+++|++..+... +.. .+.++++.
T Consensus 198 n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-r~~---~ldDYv~~ 273 (560)
T TIGR01839 198 NEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-REW---GLSTYVDA 273 (560)
T ss_pred CCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-cCC---CHHHHHHH
Confidence 55677788888643 4457788888877543322 58999999999999999998865544 332 23333344
Q ss_pred HHHHhhhhcCCCccCCCcceEEEEeChHHHHHHH----HHHhcc---ccEEEEec
Q 020199 122 LPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFA----LSLRYG---FGAVIGLD 169 (329)
Q Consensus 122 l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~----~a~~~~---v~~~v~~~ 169 (329)
+...++...+ ..+.++|.++|||+||.+++. +++.++ |+.++++.
T Consensus 274 i~~Ald~V~~---~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltlla 325 (560)
T TIGR01839 274 LKEAVDAVRA---ITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLV 325 (560)
T ss_pred HHHHHHHHHH---hcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeee
Confidence 4443333211 114578999999999998886 555543 77766544
No 118
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.89 E-value=1.8e-08 Score=88.96 Aligned_cols=116 Identities=17% Similarity=0.201 Sum_probs=67.2
Q ss_pred eeEEEEecCCCCCccEEEEECCCCCChH---HHHHHHHHHHhCCcEEEEecC----CCCCCCCCCccccchHHHHHHHHH
Q 020199 51 KPLIIVTPAGKGTFNVILFLHGTSLSNK---SYSKIFDHIASHGFIVVAPQL----YTSIPPPSATNELNSAAEVAEWLP 123 (329)
Q Consensus 51 ~~~~l~~P~~~~~~p~vi~~HG~~~~~~---~~~~~~~~la~~G~~Vv~~d~----~g~~~~~~~~~~~~~~~~~~~~l~ 123 (329)
+.++-|.+........|||+.|.+..-. ....+++.|.+.||.|+-+.+ .|+|.++ -..+..++...+++++
T Consensus 20 ~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-L~~D~~eI~~~v~ylr 98 (303)
T PF08538_consen 20 LVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-LDRDVEEIAQLVEYLR 98 (303)
T ss_dssp TEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---HHHHHHHHHHHHHHHH
T ss_pred CeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch-hhhHHHHHHHHHHHHH
Confidence 3444455544335568999999987443 356788999878999999986 4455554 4445556666666665
Q ss_pred HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-------ccEEEEeccCCC
Q 020199 124 QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDPVAG 173 (329)
Q Consensus 124 ~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-------v~~~v~~~p~~~ 173 (329)
..- .+....++|+++|||-|+--++.++.... |.++|+..|+..
T Consensus 99 ~~~------~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 99 SEK------GGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp HHS------------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred Hhh------ccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 521 01124679999999999999999887642 899999888653
No 119
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.87 E-value=1.1e-08 Score=85.64 Aligned_cols=110 Identities=17% Similarity=0.135 Sum_probs=68.1
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhh
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQ 127 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 127 (329)
+..+.+..| |+.+...-.|++-.+.+.....|+.++..++..||.|+..|+||.+.+. ........-.+.||....+.
T Consensus 15 G~~l~~~~~-pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~-p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 15 GYSLPGQRF-PADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSR-PASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CccCccccc-cCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCC-ccccccCccchhhhhhcchH
Confidence 777888777 5543323356666666667778999999999999999999999998886 33222222222333221111
Q ss_pred hhcCC-CccCCCcceEEEEeChHHHHHHHHHHh
Q 020199 128 QNLPE-NTEANVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 128 ~~~~~-~~~~d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
..++. +.....-+...+|||+||.+.-.+...
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeecccccC
Confidence 10000 000123468999999999986655443
No 120
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.86 E-value=2.9e-08 Score=85.82 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=78.8
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
+.|+++|+.+|+...|..+++.|...++.|+.++++|.+. ......+++++++...+.+.+.. ...++.++
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~---~~~~~~si~~la~~y~~~I~~~~------~~gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGD---DEPPPDSIEELASRYAEAIRARQ------PEGPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCT---TSHEESSHHHHHHHHHHHHHHHT------SSSSEEEE
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCC---CCCCCCCHHHHHHHHHHHhhhhC------CCCCeeeh
Confidence 4689999999999999999999977568999999999862 33455677777777777776652 22389999
Q ss_pred EeChHHHHHHHHHHhcc-----ccEEEEeccC
Q 020199 145 GHSRGGQTAFALSLRYG-----FGAVIGLDPV 171 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~-----v~~~v~~~p~ 171 (329)
|||+||.+|+.+|.+-. +..++++|..
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred ccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 99999999999998653 8889999943
No 121
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.78 E-value=2.2e-08 Score=87.93 Aligned_cols=126 Identities=22% Similarity=0.309 Sum_probs=76.8
Q ss_pred CCCCeeEEEEecCC---CCCccEEEEECCCCCChHH--HHHHHHHHHhCC----cEEEEecCCCCCCCC----------C
Q 020199 47 PPPPKPLIIVTPAG---KGTFNVILFLHGTSLSNKS--YSKIFDHIASHG----FIVVAPQLYTSIPPP----------S 107 (329)
Q Consensus 47 ~~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G----~~Vv~~d~~g~~~~~----------~ 107 (329)
-++...+.||.|.+ .+++|+|+++||....... .......+...| .++|+++..+..... .
T Consensus 4 Lg~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 4 LGRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TTEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred cCCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 37788999999986 5678999999997222211 223344444443 566776654433100 0
Q ss_pred CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 108 ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
............+++.+.+-..+.....+..++.+++|+||||..|+.++.++| +.++++++|..
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 001112223334444433333322223334344899999999999999999998 99999999763
No 122
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.76 E-value=3.8e-08 Score=93.59 Aligned_cols=126 Identities=18% Similarity=0.189 Sum_probs=95.7
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEEC--CCCCC---hHHHHHHHH---HHHhCCcEEEEecCCCCC
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLH--GTSLS---NKSYSKIFD---HIASHGFIVVAPQLYTSI 103 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~H--G~~~~---~~~~~~~~~---~la~~G~~Vv~~d~~g~~ 103 (329)
+......+.-.| |..|.+.||+|++.++.|+++..+ -+.-. ......... .++.+||+||..|.||.+
T Consensus 17 ~~~~~v~V~MRD----GvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 17 YIERDVMVPMRD----GVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeeEEecC----CeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 566667778886 999999999999999999999999 22211 111223333 688999999999999999
Q ss_pred CCCCC-----ccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEecc
Q 020199 104 PPPSA-----TNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDP 170 (329)
Q Consensus 104 ~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p 170 (329)
.|.+. ..+..|..+.++|+.++- . -..+|+++|.|++|...+.+|...| +|+++...+
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~Qp--W-------sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~ 157 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQP--W-------SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEG 157 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCC--c-------cCCeeeeecccHHHHHHHHHHhcCCchheeeccccc
Confidence 88741 135667888999987722 2 2468999999999999999999887 777765543
No 123
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.75 E-value=2e-07 Score=78.87 Aligned_cols=176 Identities=13% Similarity=0.215 Sum_probs=92.7
Q ss_pred CCCeeEEEEecCCC--CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCC-CCCCC--Ccccc----chHHHH
Q 020199 48 PPPKPLIIVTPAGK--GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTS-IPPPS--ATNEL----NSAAEV 118 (329)
Q Consensus 48 ~~~~~~~l~~P~~~--~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~-~~~~~--~~~~~----~~~~~~ 118 (329)
++.+.++--.|+.. .+.+.|++.+|++-....|..++.+|+..||.|+-+|.-.+ |.+++ ..... .++..+
T Consensus 12 ~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V 91 (294)
T PF02273_consen 12 GRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTV 91 (294)
T ss_dssp TEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHH
T ss_pred CCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHH
Confidence 78888888888743 45799999999999999999999999999999999997543 33432 22222 244455
Q ss_pred HHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhccccEEEEeccCCCC----------CCC---CCCCCc--
Q 020199 119 AEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGT----------SKT---TGLDPS-- 183 (329)
Q Consensus 119 ~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~----------~~~---~~~~~~-- 183 (329)
++|+.. . ...+++++.-|..|-+|...+.+-.+.-+|..-...+. +.. ..-.|.
T Consensus 92 ~dwl~~----~-------g~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dl 160 (294)
T PF02273_consen 92 IDWLAT----R-------GIRRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDL 160 (294)
T ss_dssp HHHHHH----T-------T---EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEE
T ss_pred HHHHHh----c-------CCCcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcc
Confidence 555543 3 56789999999999999999986554444433332222 000 000000
Q ss_pred ----------ccc-------c-------Ccc-CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEec
Q 020199 184 ----------ILS-------F-------DSF-DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVAT 238 (329)
Q Consensus 184 ----------~~~-------~-------~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 238 (329)
++. + +.. ++++|++.++ +..|..+.+. +-.+.+..+..+...++.++
T Consensus 161 dfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~---A~~D~WV~q~-----eV~~~~~~~~s~~~klysl~ 232 (294)
T PF02273_consen 161 DFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFT---ANDDDWVKQS-----EVEELLDNINSNKCKLYSLP 232 (294)
T ss_dssp EETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEE---ETT-TTS-HH-----HHHHHHTT-TT--EEEEEET
T ss_pred cccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEE---eCCCccccHH-----HHHHHHHhcCCCceeEEEec
Confidence 000 0 223 7899999999 5557764422 33445666667776789999
Q ss_pred cCCc
Q 020199 239 DYGH 242 (329)
Q Consensus 239 ~~gH 242 (329)
|++|
T Consensus 233 Gs~H 236 (294)
T PF02273_consen 233 GSSH 236 (294)
T ss_dssp T-SS
T ss_pred Cccc
Confidence 9999
No 124
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.73 E-value=1.1e-06 Score=81.68 Aligned_cols=110 Identities=9% Similarity=-0.009 Sum_probs=73.1
Q ss_pred CeeEEEEecCCCC---CccEEEEECCCCCChHH-HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHH
Q 020199 50 PKPLIIVTPAGKG---TFNVILFLHGTSLSNKS-YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQG 125 (329)
Q Consensus 50 ~~~~~l~~P~~~~---~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~ 125 (329)
.....-|.|...+ ..|.|+++.-+.+.... .+++.+.|.. |+.|++.|+...+... ......++.++++++.+.
T Consensus 85 ~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp-~~~~~f~ldDYi~~l~~~ 162 (406)
T TIGR01849 85 FCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVP-LSAGKFDLEDYIDYLIEF 162 (406)
T ss_pred CeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCc-hhcCCCCHHHHHHHHHHH
Confidence 4555666665332 12677777777664433 4688899988 9999999996655332 122334566667787777
Q ss_pred hhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc-----c--ccEEEEec
Q 020199 126 LQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY-----G--FGAVIGLD 169 (329)
Q Consensus 126 ~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~-----~--v~~~v~~~ 169 (329)
++.. ..+ +.++|+|+||..++.+++.. | ++.++++.
T Consensus 163 i~~~-------G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~ 205 (406)
T TIGR01849 163 IRFL-------GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMG 205 (406)
T ss_pred HHHh-------CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEe
Confidence 7665 444 99999999999977666554 3 66666544
No 125
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.71 E-value=1.9e-07 Score=80.60 Aligned_cols=105 Identities=18% Similarity=0.163 Sum_probs=65.1
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHh--------CCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCc
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIAS--------HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENT 134 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~--------~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 134 (329)
...+|||+||.+|+...++.++..+.+ ..+.++.+|+......- ....+.+..+.+....+.+.+... ..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~-~g~~l~~q~~~~~~~i~~i~~~~~-~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF-HGRTLQRQAEFLAEAIKYILELYK-SN 80 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc-ccccHHHHHHHHHHHHHHHHHhhh-hc
Confidence 357899999999999888888877632 25788888875542221 111222222222222222222211 11
Q ss_pred cCCCcceEEEEeChHHHHHHHHHHhcc-----ccEEEEec
Q 020199 135 EANVSLVAVMGHSRGGQTAFALSLRYG-----FGAVIGLD 169 (329)
Q Consensus 135 ~~d~~~i~l~GhS~GG~~a~~~a~~~~-----v~~~v~~~ 169 (329)
....++|.++||||||.++-.++.... ++.++.++
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 235679999999999999888776543 78888776
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.69 E-value=3.1e-07 Score=75.56 Aligned_cols=101 Identities=18% Similarity=0.161 Sum_probs=66.5
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
.++||+-|=||=...-..+++.|+++|+.|+.+|..-+--+. +.......++.+.+.....+. ..+++.++
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~--rtP~~~a~Dl~~~i~~y~~~w-------~~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE--RTPEQTAADLARIIRHYRARW-------GRKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh--CCHHHHHHHHHHHHHHHHHHh-------CCceEEEE
Confidence 356677776664455568899999999999999974332111 111112222222333333344 66899999
Q ss_pred EeChHHHHHHHHHHhcc------ccEEEEeccCCCC
Q 020199 145 GHSRGGQTAFALSLRYG------FGAVIGLDPVAGT 174 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~------v~~~v~~~p~~~~ 174 (329)
|+|||+-+.-.+..+-| |+.++++.|....
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTA 109 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcc
Confidence 99999988777777766 8888888876544
No 127
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.67 E-value=1.1e-07 Score=88.35 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=85.2
Q ss_pred CCCeeEEEEecC-CCCCccEEEEECCCCC---ChHHHHHHHHHHHhCC-cEEEEecCCCC--C------CC--C--CCcc
Q 020199 48 PPPKPLIIVTPA-GKGTFNVILFLHGTSL---SNKSYSKIFDHIASHG-FIVVAPQLYTS--I------PP--P--SATN 110 (329)
Q Consensus 48 ~~~~~~~l~~P~-~~~~~p~vi~~HG~~~---~~~~~~~~~~~la~~G-~~Vv~~d~~g~--~------~~--~--~~~~ 110 (329)
..=+.+.||.|. ...+.||+|++||++- +......=...|+++| ++||.+|||-. | .. . ....
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 345888999999 5566899999999864 3333333467899998 99999999542 0 00 0 0122
Q ss_pred ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccCC
Q 020199 111 ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPVA 172 (329)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~~ 172 (329)
...|....++|+.+++++. +-|+++|.|+|+|.|++.++.+...-. ++..|+.++..
T Consensus 157 Gl~DqilALkWV~~NIe~F-----GGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 157 GLLDQILALKWVRDNIEAF-----GGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred cHHHHHHHHHHHHHHHHHh-----CCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 4567888999999999887 338999999999999999888765422 44444555443
No 128
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.66 E-value=8.4e-08 Score=92.75 Aligned_cols=116 Identities=20% Similarity=0.275 Sum_probs=81.3
Q ss_pred CCCeeEEEEecCC---CCCccEEEEECCCCCC---hHHHHHHHHHHHhC--CcEEEEecCC-CCCCC---C----CCccc
Q 020199 48 PPPKPLIIVTPAG---KGTFNVILFLHGTSLS---NKSYSKIFDHIASH--GFIVVAPQLY-TSIPP---P----SATNE 111 (329)
Q Consensus 48 ~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~---~~~~~~~~~~la~~--G~~Vv~~d~~-g~~~~---~----~~~~~ 111 (329)
..=+.+.||.|.. ..+.|+||++||++.. ...+ ....|+.. |++|+.+++| |.... . .....
T Consensus 76 Edcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g 153 (493)
T cd00312 76 EDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYG 153 (493)
T ss_pred CcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchh
Confidence 4568889999974 3568999999997642 2221 23445544 3999999998 43111 0 01234
Q ss_pred cchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEecc
Q 020199 112 LNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDP 170 (329)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p 170 (329)
..|...+++|+.+.+... +.|.++|.++|+|.||..+..++.... ++++|+.+.
T Consensus 154 ~~D~~~al~wv~~~i~~f-----ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg 211 (493)
T cd00312 154 LKDQRLALKWVQDNIAAF-----GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSG 211 (493)
T ss_pred HHHHHHHHHHHHHHHHHh-----CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcC
Confidence 568889999999988765 358999999999999999988876532 666665553
No 129
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.65 E-value=5.4e-07 Score=77.52 Aligned_cols=98 Identities=26% Similarity=0.340 Sum_probs=71.1
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCC--cEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHG--FIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G--~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
.|.++++||++++...|......+.... |.|+.+|.+|++.+. .. ........+.+...++++ ...++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~-------~~~~~ 90 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL-------GLEKV 90 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh-------CCCce
Confidence 5599999999999888877433443321 999999999998874 11 112222245555555444 44559
Q ss_pred EEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 142 AVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
.++|||+||.+++.++..+| +++++++++.
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred EEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 99999999999999999988 8888888754
No 130
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.65 E-value=4.6e-07 Score=80.24 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=84.8
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhC---CcEEEEecCCCCCCCCCC-----ccccchHHHHHHHHHHHhhhhcCCCcc
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASH---GFIVVAPQLYTSIPPPSA-----TNELNSAAEVAEWLPQGLQQNLPENTE 135 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~---G~~Vv~~d~~g~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (329)
.++++|++|..|-.+.|..+++.|.++ .|.|+++.|.|+...... .....+.++.++...+.+++.++...
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~- 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN- 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc-
Confidence 468999999999999999999998855 799999999998666522 23456777777777777776654321
Q ss_pred CCCcceEEEEeChHHHHHHHHHHhcc-----ccEEEEeccCC
Q 020199 136 ANVSLVAVMGHSRGGQTAFALSLRYG-----FGAVIGLDPVA 172 (329)
Q Consensus 136 ~d~~~i~l~GhS~GG~~a~~~a~~~~-----v~~~v~~~p~~ 172 (329)
-...++.++|||.|+++++.++.+.+ |+.++++-|..
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 12468999999999999999998876 67777777764
No 131
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.59 E-value=6.7e-07 Score=74.16 Aligned_cols=167 Identities=16% Similarity=0.221 Sum_probs=102.1
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCC--C---------------CccccchHHHHHHHHHHHh
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPP--S---------------ATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~--~---------------~~~~~~~~~~~~~~l~~~~ 126 (329)
...|||+||.+.+...|..+++.|.-....-++|.-+-..... + ...+........+.+...+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 3579999999999999988888776666666666443221110 0 0111122222333333322
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCCCCCcccccCccCCCCCeEEEecCCC
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLG 204 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~~~~G 204 (329)
++.. ..+++.++|++.|+|+||..++..+..++ +.+++...++..... ...+... ...+ .+|++..| |
T Consensus 83 ~~e~--~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~--~~~~~~~--~~~~-~~~i~~~H---g 152 (206)
T KOG2112|consen 83 DNEP--ANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS--IGLPGWL--PGVN-YTPILLCH---G 152 (206)
T ss_pred HHHH--HcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch--hhccCCc--cccC-cchhheec---c
Confidence 2221 23557889999999999999999999876 555555554432100 0000000 0002 68999999 8
Q ss_pred CCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 205 GVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 205 ~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
+.|+++|-. ......+++..+.... .+..+++.+|.
T Consensus 153 ~~d~~vp~~--~g~~s~~~l~~~~~~~-~f~~y~g~~h~ 188 (206)
T KOG2112|consen 153 TADPLVPFR--FGEKSAQFLKSLGVRV-TFKPYPGLGHS 188 (206)
T ss_pred cCCceeehH--HHHHHHHHHHHcCCce-eeeecCCcccc
Confidence 889998832 2233556777777774 99999999994
No 132
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.59 E-value=1.2e-06 Score=83.90 Aligned_cols=153 Identities=17% Similarity=0.158 Sum_probs=105.3
Q ss_pred CCCCCCccccccCCCCcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCC---CCCccEEEEECCCCCChH--HHHHHHH
Q 020199 11 ASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAG---KGTFNVILFLHGTSLSNK--SYSKIFD 85 (329)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~--~~~~~~~ 85 (329)
.+.+-....+..+++.+.+..|..+++..+..+ |..+++.|++-++ .++.|++++--|..|... .|....-
T Consensus 396 ~t~er~~LkqqeV~~g~dp~~Y~s~riwa~a~d----gv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~l 471 (682)
T COG1770 396 ATGERTLLKQQEVPGGFDPEDYVSRRIWATADD----GVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARL 471 (682)
T ss_pred cCCcEEEEEeccCCCCCChhHeEEEEEEEEcCC----CcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCccccee
Confidence 334444455556777788999999999998875 9999999988764 567899999988877543 2444445
Q ss_pred HHHhCCcEEEEecCCCCCCCCCCc--------cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHH
Q 020199 86 HIASHGFIVVAPQLYTSIPPPSAT--------NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALS 157 (329)
Q Consensus 86 ~la~~G~~Vv~~d~~g~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a 157 (329)
-|..+||+-...--||.+.-+ .. .......++++-....+++ +-.+.++|+++|-|.||++...++
T Consensus 472 SLlDRGfiyAIAHVRGGgelG-~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~-----g~~~~~~i~a~GGSAGGmLmGav~ 545 (682)
T COG1770 472 SLLDRGFVYAIAHVRGGGELG-RAWYEDGKLLNKKNTFTDFIAAARHLVKE-----GYTSPDRIVAIGGSAGGMLMGAVA 545 (682)
T ss_pred eeecCceEEEEEEeecccccC-hHHHHhhhhhhccccHHHHHHHHHHHHHc-----CcCCccceEEeccCchhHHHHHHH
Confidence 677899877777668876654 11 0111223333332222222 233667999999999999999988
Q ss_pred Hhcc--ccEEEEeccCCC
Q 020199 158 LRYG--FGAVIGLDPVAG 173 (329)
Q Consensus 158 ~~~~--v~~~v~~~p~~~ 173 (329)
-..| ++++|+.-|+..
T Consensus 546 N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 546 NMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hhChhhhhheeecCCccc
Confidence 8888 888888777654
No 133
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.58 E-value=9.9e-08 Score=86.84 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=63.2
Q ss_pred CCccEEEEECCCCCCh---HHHHHHHHHHHh---CCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCcc
Q 020199 62 GTFNVILFLHGTSLSN---KSYSKIFDHIAS---HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTE 135 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~---~~~~~~~~~la~---~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (329)
.+.|++|++|||.++. .....+.+.+-+ ..+.|+++|+....... -.........+...+.+.+..+.. ...
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~-~~g 146 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLIN-NFG 146 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHH-HH-
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHh-hcC
Confidence 4679999999999877 334555664444 48999999994322111 111122223333333333333221 124
Q ss_pred CCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccCCC
Q 020199 136 ANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPVAG 173 (329)
Q Consensus 136 ~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~~~ 173 (329)
++.++|.++|||+||++|-.++.... |..|..+||...
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 57899999999999999998887643 899999998764
No 134
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.54 E-value=4.2e-07 Score=77.81 Aligned_cols=158 Identities=18% Similarity=0.218 Sum_probs=79.8
Q ss_pred CccEEEEECCCCCChHHHH----HHHHHHHhCCcEEEEecCCCCC-----CCC------------C----------Cccc
Q 020199 63 TFNVILFLHGTSLSNKSYS----KIFDHIASHGFIVVAPQLYTSI-----PPP------------S----------ATNE 111 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~----~~~~~la~~G~~Vv~~d~~g~~-----~~~------------~----------~~~~ 111 (329)
+.+-|+++||++.+...+. .+...|.+.++..+.+|-+-.. ... . ....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4578999999999998765 4555665547888888853221 110 0 0011
Q ss_pred cchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc----------cccEEEEeccCCCCCCCCCCC
Q 020199 112 LNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY----------GFGAVIGLDPVAGTSKTTGLD 181 (329)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~----------~v~~~v~~~p~~~~~~~~~~~ 181 (329)
...+.+.++++.+.+++. . .=.+|+|+|.||.+|..++... ++|.+|+++++...... ..
T Consensus 83 ~~~~~~sl~~l~~~i~~~-------G-PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--~~ 152 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN-------G-PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--YQ 152 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---GT
T ss_pred ccCHHHHHHHHHHHHHhc-------C-CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--hh
Confidence 344667777777776654 1 1369999999999999888642 17888888866543211 00
Q ss_pred CcccccCccCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 182 PSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 182 ~~~~~~~~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
. .+ ....|++|+|-|. |..|.++++. ......+.+... ..++..++||.
T Consensus 153 ~-~~--~~~~i~iPtlHv~---G~~D~~~~~~-----~s~~L~~~~~~~--~~v~~h~gGH~ 201 (212)
T PF03959_consen 153 E-LY--DEPKISIPTLHVI---GENDPVVPPE-----RSEALAEMFDPD--ARVIEHDGGHH 201 (212)
T ss_dssp T-TT----TT---EEEEEE---ETT-SSS-HH-----HHHHHHHHHHHH--EEEEEESSSSS
T ss_pred h-hh--ccccCCCCeEEEE---eCCCCCcchH-----HHHHHHHhccCC--cEEEEECCCCc
Confidence 0 00 1226799999999 7789987643 122233333332 45666677883
No 135
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.50 E-value=7.3e-07 Score=86.87 Aligned_cols=118 Identities=19% Similarity=0.179 Sum_probs=78.5
Q ss_pred CCeeEEEEecCCCC---CccEEEEECCCCC---Ch-HHHHHHHHHHHhCCcEEEEecCCCC-------CCCC-C-Ccccc
Q 020199 49 PPKPLIIVTPAGKG---TFNVILFLHGTSL---SN-KSYSKIFDHIASHGFIVVAPQLYTS-------IPPP-S-ATNEL 112 (329)
Q Consensus 49 ~~~~~~l~~P~~~~---~~p~vi~~HG~~~---~~-~~~~~~~~~la~~G~~Vv~~d~~g~-------~~~~-~-~~~~~ 112 (329)
.=+.+.||.|.... +.||+|++||++. +. .....-...+++++++||.+++|-. +... . ....+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 45889999998533 5799999999864 22 1222334566788999999999542 1111 0 23345
Q ss_pred chHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccC
Q 020199 113 NSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPV 171 (329)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~ 171 (329)
.|...+++|+.+.+... +-|+++|.++|||.||..+..++.... ++++|+.++.
T Consensus 187 ~Dq~~AL~WV~~nI~~F-----GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAF-----GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHGGGG-----TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhHHHHHHHHhhhhhc-----ccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 68889999999999876 338899999999999998888766532 8888888763
No 136
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.45 E-value=3.6e-06 Score=75.55 Aligned_cols=76 Identities=25% Similarity=0.208 Sum_probs=48.9
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccC-CCcceEEEEeChHHHHHHHHHHhc
Q 020199 82 KIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEA-NVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 82 ~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
.+...+.++||+|+++|+.|.+.+ -..........+|-++... ++.+. .++ ...+++++|||.||..++.++...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~--y~~~~~~a~avLD~vRAA~-~~~~~-~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTP--YLNGRSEAYAVLDAVRAAR-NLPPK-LGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCc--ccCcHhHHHHHHHHHHHHH-hcccc-cCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 445667789999999999987663 2223344555566554422 22111 112 236899999999999998877553
Q ss_pred c
Q 020199 161 G 161 (329)
Q Consensus 161 ~ 161 (329)
+
T Consensus 93 ~ 93 (290)
T PF03583_consen 93 P 93 (290)
T ss_pred H
Confidence 3
No 137
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.44 E-value=8.2e-06 Score=73.56 Aligned_cols=93 Identities=18% Similarity=0.228 Sum_probs=58.3
Q ss_pred CCCccEEEEECCCCCChHHHH--------HHHH------HHHhCCcEEEEecCCCCC-CCCCCcc-------------cc
Q 020199 61 KGTFNVILFLHGTSLSNKSYS--------KIFD------HIASHGFIVVAPQLYTSI-PPPSATN-------------EL 112 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~~~--------~~~~------~la~~G~~Vv~~d~~g~~-~~~~~~~-------------~~ 112 (329)
..+..+|+++|++.|+..... ++-. .+.-.-|-|++.|..|+. .+. .+. ..
T Consensus 48 ~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GSt-gP~s~~p~g~~yg~~FP~ 126 (368)
T COG2021 48 AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGST-GPSSINPGGKPYGSDFPV 126 (368)
T ss_pred ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCC-CCCCcCCCCCccccCCCc
Confidence 345679999999999654432 2222 233334999999997764 222 111 12
Q ss_pred chHHHHHHHHHHHhhhhcCCCccCCCcceE-EEEeChHHHHHHHHHHhcc
Q 020199 113 NSAAEVAEWLPQGLQQNLPENTEANVSLVA-VMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~-l~GhS~GG~~a~~~a~~~~ 161 (329)
-.+.+.+..-+..++++ ..+++. ++|-||||+.++.++..+|
T Consensus 127 ~ti~D~V~aq~~ll~~L-------GI~~l~avvGgSmGGMqaleWa~~yP 169 (368)
T COG2021 127 ITIRDMVRAQRLLLDAL-------GIKKLAAVVGGSMGGMQALEWAIRYP 169 (368)
T ss_pred ccHHHHHHHHHHHHHhc-------CcceEeeeeccChHHHHHHHHHHhCh
Confidence 23333333322233444 667775 9999999999999999998
No 138
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.42 E-value=1.5e-05 Score=71.73 Aligned_cols=108 Identities=13% Similarity=0.072 Sum_probs=69.3
Q ss_pred CCeeEEEEecCC--CCCccEEEEECCCCCChHHHH-H-HHHHHHhCCcEEEEecCCCCCCCCCCcc----ccchHHHH--
Q 020199 49 PPKPLIIVTPAG--KGTFNVILFLHGTSLSNKSYS-K-IFDHIASHGFIVVAPQLYTSIPPPSATN----ELNSAAEV-- 118 (329)
Q Consensus 49 ~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~~~~-~-~~~~la~~G~~Vv~~d~~g~~~~~~~~~----~~~~~~~~-- 118 (329)
+.-.+.+..|.. ....|++|.++|.|......+ . ++.-|.+.|+..+.+..+-++.-. ... ......+.
T Consensus 75 ~~a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk-P~~Q~~s~l~~VsDl~~ 153 (348)
T PF09752_consen 75 RTARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK-PKDQRRSSLRNVSDLFV 153 (348)
T ss_pred hheEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccC-hhHhhcccccchhHHHH
Confidence 456677788875 356899999999998664332 3 488899999999999976664432 111 11111111
Q ss_pred -----HHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 119 -----AEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 119 -----~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
+......+ .++..+ ...++++.|.||||++|..++...|
T Consensus 154 ~g~~~i~E~~~Ll-~Wl~~~---G~~~~g~~G~SmGG~~A~laa~~~p 197 (348)
T PF09752_consen 154 MGRATILESRALL-HWLERE---GYGPLGLTGISMGGHMAALAASNWP 197 (348)
T ss_pred HHhHHHHHHHHHH-HHHHhc---CCCceEEEEechhHhhHHhhhhcCC
Confidence 11111111 111111 4569999999999999999999887
No 139
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.40 E-value=0.00011 Score=64.13 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=95.3
Q ss_pred eEEEEeecCCCCCCCCCeeEEEEecCCCCCccEEEEECCCCCChHH-HHHH-----HHHHHhCCcEEEEecCCCC--CCC
Q 020199 34 TKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKS-YSKI-----FDHIASHGFIVVAPQLYTS--IPP 105 (329)
Q Consensus 34 v~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~-~~~~-----~~~la~~G~~Vv~~d~~g~--~~~ 105 (329)
+....++.. -..+.+.|+--.+. ++|++|=.|..|.+... |..+ ...+..+ |+++-+|.+|. +.+
T Consensus 22 ~~e~~V~T~-----~G~v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETA-----HGVVHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeeccc-----cccEEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCc
Confidence 445555544 56788888865544 67889999999998765 4433 4567778 99999999997 333
Q ss_pred CCCcc--ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 106 PSATN--ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 106 ~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
. .+. ....+.+..+.+...++.+ ..+.|.-+|--.|+++-.++|..+| |-++|++++....
T Consensus 95 ~-~p~~y~yPsmd~LAd~l~~VL~~f-------~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 95 S-FPEGYPYPSMDDLADMLPEVLDHF-------GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA 159 (326)
T ss_pred c-CCCCCCCCCHHHHHHHHHHHHHhc-------CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC
Confidence 3 222 3567888888888877666 6788999999999999999999999 9999999865443
No 140
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.40 E-value=4.9e-06 Score=78.84 Aligned_cols=197 Identities=16% Similarity=0.135 Sum_probs=120.4
Q ss_pred cCCCCceeEEEEeecCCCCCCCCCeeEEEEecCC--CCCccEEEEECCCCCChH--HHHHHHHHHHhCCcEEEEecCCCC
Q 020199 27 FTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAG--KGTFNVILFLHGTSLSNK--SYSKIFDHIASHGFIVVAPQLYTS 102 (329)
Q Consensus 27 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~--~~~~~~~~la~~G~~Vv~~d~~g~ 102 (329)
+....+.|++..-+..| |..|+.+|.+ +. ..+.|++++.-|+..-+. .|......+-++|.+-+..+.||.
T Consensus 387 FDa~~~~veQ~~atSkD----GT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGG 461 (648)
T COG1505 387 FDADNYEVEQFFATSKD----GTRIPYFIVR-KGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGG 461 (648)
T ss_pred cCccCceEEEEEEEcCC----CccccEEEEe-cCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccC
Confidence 34457888888778876 9999999998 43 225788777766655332 255555778889999999999998
Q ss_pred CCCCCCc-----------cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEec
Q 020199 103 IPPPSAT-----------NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLD 169 (329)
Q Consensus 103 ~~~~~~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~ 169 (329)
|..+ .. .-.+|..+++.+|.+ + +.-.++++++.|-|.||.++-.+..++| +.++++--
T Consensus 462 GEfG-p~WH~Aa~k~nrq~vfdDf~AVaedLi~---r-----gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ev 532 (648)
T COG1505 462 GEFG-PEWHQAGMKENKQNVFDDFIAVAEDLIK---R-----GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEV 532 (648)
T ss_pred CccC-HHHHHHHhhhcchhhhHHHHHHHHHHHH---h-----CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeecc
Confidence 8765 21 112233333333332 2 1225679999999999999888888888 77777766
Q ss_pred cCCCCCCCCCCCC--------------c----ccccC---cc---CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHH
Q 020199 170 PVAGTSKTTGLDP--------------S----ILSFD---SF---DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFN 225 (329)
Q Consensus 170 p~~~~~~~~~~~~--------------~----~~~~~---~~---~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~ 225 (329)
|...+-++..+.. . +..+. .+ +.-.|+||-. +..|+-+-|.... .....++
T Consensus 533 PllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITT---s~~DDRVHPaHar--Kfaa~L~ 607 (648)
T COG1505 533 PLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITT---SLHDDRVHPAHAR--KFAAKLQ 607 (648)
T ss_pred chhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEc---ccccccccchHHH--HHHHHHH
Confidence 7665533322211 1 11122 22 2235788888 4455543333111 1222334
Q ss_pred HccCCCeeEEEeccCCcc
Q 020199 226 RCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 226 ~~~~~~k~~~~~~~~gH~ 243 (329)
....+. .+.+-.++||.
T Consensus 608 e~~~pv-~~~e~t~gGH~ 624 (648)
T COG1505 608 EVGAPV-LLREETKGGHG 624 (648)
T ss_pred hcCCce-EEEeecCCccc
Confidence 444444 66666789994
No 141
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.39 E-value=3.7e-06 Score=73.55 Aligned_cols=109 Identities=17% Similarity=0.350 Sum_probs=68.5
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHH-hCCc----EEEEecCCCC------CCCC-CC-------cccc-chHHHHHHHH
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIA-SHGF----IVVAPQLYTS------IPPP-SA-------TNEL-NSAAEVAEWL 122 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la-~~G~----~Vv~~d~~g~------~~~~-~~-------~~~~-~~~~~~~~~l 122 (329)
...+.||+||++|+...+..+.+.+. ++|. .++-++--|. -... .. .... .+......|+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 45688999999999999999999997 5552 2344443331 1111 01 1112 2566777887
Q ss_pred HHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-------ccEEEEec-cCCCC
Q 020199 123 PQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLD-PVAGT 174 (329)
Q Consensus 123 ~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-------v~~~v~~~-p~~~~ 174 (329)
...+..+-. ....+++-++||||||..++.++..+. +..+|.++ |+.+.
T Consensus 90 ~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 90 KKVLKYLKK---KYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHH---CC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHH---hcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 776665522 226789999999999999999888753 77888776 55544
No 142
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.36 E-value=7.6e-07 Score=76.01 Aligned_cols=89 Identities=21% Similarity=0.269 Sum_probs=49.1
Q ss_pred EEEEECCCCC-ChHHHHHHHHHHHhCCcE---EEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 66 VILFLHGTSL-SNKSYSKIFDHIASHGFI---VVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 66 ~vi~~HG~~~-~~~~~~~~~~~la~~G~~---Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
+|||+||.++ ....|..++.+|.++||. |+++++-...... .........+....+..++++.++. -.. +|
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~-~~~~~~~~~~~~~~l~~fI~~Vl~~---TGa-kV 77 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSP-SVQNAHMSCESAKQLRAFIDAVLAY---TGA-KV 77 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHT-HHHHHHB-HHHHHHHHHHHHHHHHH---HT---E
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCC-cccccccchhhHHHHHHHHHHHHHh---hCC-EE
Confidence 6899999999 667899999999999999 7999874432211 1111110111123333333322211 145 89
Q ss_pred EEEEeChHHHHHHHHHHh
Q 020199 142 AVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~ 159 (329)
-|+||||||.++-.+...
T Consensus 78 DIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEETCHHHHHHHHHHH
T ss_pred EEEEcCCcCHHHHHHHHH
Confidence 999999999988887654
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.35 E-value=2.4e-05 Score=63.21 Aligned_cols=149 Identities=12% Similarity=0.030 Sum_probs=87.0
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
+.+|++||++++... .++-....+. -.+-.++...... ....+.++.+.+.+.. ....++++
T Consensus 3 ~~~lIVpG~~~Sg~~-HWq~~we~~l-~~a~rveq~~w~~--------P~~~dWi~~l~~~v~a--------~~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPN-HWQSRWESAL-PNARRVEQDDWEA--------PVLDDWIARLEKEVNA--------AEGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChh-HHHHHHHhhC-ccchhcccCCCCC--------CCHHHHHHHHHHHHhc--------cCCCeEEE
Confidence 568999999998743 2222222222 1233333322222 2233334444443333 23459999
Q ss_pred EeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCCCCCcc--cccCcc-CCCCCeEEEecCCCCCcccCccCCCCCCC
Q 020199 145 GHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTGLDPSI--LSFDSF-DFSIPVTVIGTGLGGVARCITACAPEGAN 219 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~~~~~~--~~~~~~-~i~~P~Lii~~~~G~~D~~~~~~~~~~~~ 219 (329)
+||+|+.+++.++.... |++++++.|...... ....... +.+... .+--|.+++.+.+ |.++++ +
T Consensus 65 AHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~-~~~~~~~~tf~~~p~~~lpfps~vvaSrn---Dp~~~~------~ 134 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP-EIRPKHLMTFDPIPREPLPFPSVVVASRN---DPYVSY------E 134 (181)
T ss_pred EecccHHHHHHHHHhhhhccceEEEecCCCcccc-ccchhhccccCCCccccCCCceeEEEecC---CCCCCH------H
Confidence 99999999999987654 999999998764321 1111111 111222 5667999999555 888763 3
Q ss_pred HHHHHHHccCCCeeEEEeccCCcc
Q 020199 220 HEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 220 ~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
+.+.+.+.-+. .++...++||+
T Consensus 135 ~a~~~a~~wgs--~lv~~g~~GHi 156 (181)
T COG3545 135 HAEDLANAWGS--ALVDVGEGGHI 156 (181)
T ss_pred HHHHHHHhccH--hheeccccccc
Confidence 44445444432 57888889994
No 144
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.33 E-value=4.8e-05 Score=63.79 Aligned_cols=156 Identities=22% Similarity=0.207 Sum_probs=94.3
Q ss_pred CccEEEEECCCCCChHHHH----HHHHHHHhCCcEEEEecCCCC----CCCCC-C------c------------------
Q 020199 63 TFNVILFLHGTSLSNKSYS----KIFDHIASHGFIVVAPQLYTS----IPPPS-A------T------------------ 109 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~----~~~~~la~~G~~Vv~~d~~g~----~~~~~-~------~------------------ 109 (329)
+.+-|+++||+-.+...+. .+...|.+. +-.+.+|-+-. ..+.. + +
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4577999999998877654 455556655 77777775421 00000 0 0
Q ss_pred cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----------ccEEEEeccCCCCCCCCC
Q 020199 110 NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----------FGAVIGLDPVAGTSKTTG 179 (329)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----------v~~~v~~~p~~~~~~~~~ 179 (329)
......+..++++.+.+.+. +..| |++|+|.|+.++..++.... ++=+|.++.+......
T Consensus 83 ~~~~~~eesl~yl~~~i~en----GPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-- 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKEN----GPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-- 152 (230)
T ss_pred ccccChHHHHHHHHHHHHHh----CCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--
Confidence 01112344566666665554 3334 89999999999999988322 5667777655433110
Q ss_pred CCCcccccCccCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 180 LDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 180 ~~~~~~~~~~~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
..... -...+++|.|-|. |+.|.++|... -...+..+... .++...+||+
T Consensus 153 ~~~~~---~~~~i~~PSLHi~---G~~D~iv~~~~-----s~~L~~~~~~a---~vl~HpggH~ 202 (230)
T KOG2551|consen 153 LDESA---YKRPLSTPSLHIF---GETDTIVPSER-----SEQLAESFKDA---TVLEHPGGHI 202 (230)
T ss_pred hhhhh---hccCCCCCeeEEe---cccceeecchH-----HHHHHHhcCCC---eEEecCCCcc
Confidence 00000 1117899999999 88899987431 23345555554 6778889995
No 145
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.23 E-value=5.5e-05 Score=68.48 Aligned_cols=150 Identities=14% Similarity=0.192 Sum_probs=92.0
Q ss_pred CCCeeEEEEecCC-CCCccEEEEECCCCCChH---HHHHHHHHHHhCCcEEEEecCCCCCCC---CC------------C
Q 020199 48 PPPKPLIIVTPAG-KGTFNVILFLHGTSLSNK---SYSKIFDHIASHGFIVVAPQLYTSIPP---PS------------A 108 (329)
Q Consensus 48 ~~~~~~~l~~P~~-~~~~p~vi~~HG~~~~~~---~~~~~~~~la~~G~~Vv~~d~~g~~~~---~~------------~ 108 (329)
+..-..-+|+|.. ......||++||.+.+.+ ....+.+.|..+|++++++..+..... .. .
T Consensus 70 ~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~ 149 (310)
T PF12048_consen 70 GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQ 149 (310)
T ss_pred CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCC
Confidence 4455566788874 345789999999998764 467888999999999999888762110 00 0
Q ss_pred c--ccc-----------chHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc---ccEEEEeccCC
Q 020199 109 T--NEL-----------NSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLDPVA 172 (329)
Q Consensus 109 ~--~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~p~~ 172 (329)
. ... .........+...+.+.+.....-...+|+++||+.|+..++.+....+ +.++|.+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 150 QLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred CcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 0 000 0111112222222222211111113456999999999999999999887 78999999876
Q ss_pred CCCCCCCCCCcccccCcc-CCCCCeEEEecC
Q 020199 173 GTSKTTGLDPSILSFDSF-DFSIPVTVIGTG 202 (329)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~ 202 (329)
..... ...+ .+.+ .+++|+|=|...
T Consensus 230 p~~~~---n~~l--~~~la~l~iPvLDi~~~ 255 (310)
T PF12048_consen 230 PQPDR---NPAL--AEQLAQLKIPVLDIYSA 255 (310)
T ss_pred Ccchh---hhhH--HHHhhccCCCEEEEecC
Confidence 54321 0000 0222 789999988833
No 146
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=3e-05 Score=74.12 Aligned_cols=136 Identities=21% Similarity=0.248 Sum_probs=94.7
Q ss_pred CcCCCCceeEEEEeecCCCCCCCCCeeEEEEecCC---CCCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCC
Q 020199 26 VFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAG---KGTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLY 100 (329)
Q Consensus 26 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~ 100 (329)
.++.+.|.++++.+...| |..++..|++-+. .++.|.++..+|..+-.-. |+.-..-|..+|++.+..|.|
T Consensus 433 g~~~s~y~~~r~~~~SkD----Gt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 433 GFDASDYVVERIEVSSKD----GTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred cccccceEEEEEEEecCC----CCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 345568899999888886 9999999998552 4578999999988774433 333233455689999999999
Q ss_pred CCCCCCC----------CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEe
Q 020199 101 TSIPPPS----------ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGL 168 (329)
Q Consensus 101 g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~ 168 (329)
|.|.-+. ..+...|...-+++|.+ .+....+++.+.|.|.||.++....-.+| ++|+++-
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve--------~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVE--------NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHH--------cCCCCccceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 9876641 11222333333333333 23346789999999999999999888888 7777665
Q ss_pred ccCCC
Q 020199 169 DPVAG 173 (329)
Q Consensus 169 ~p~~~ 173 (329)
-|+..
T Consensus 581 VpfmD 585 (712)
T KOG2237|consen 581 VPFMD 585 (712)
T ss_pred Cccee
Confidence 55543
No 147
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.18 E-value=1e-05 Score=69.55 Aligned_cols=93 Identities=13% Similarity=0.189 Sum_probs=53.7
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhC--CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASH--GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~--G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
+.-+|||+||++|+..+|..+.+.|... .+.-..+...+.... ......++....+.+.+.+.+.+.... ....+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n--~~~T~~gI~~~g~rL~~eI~~~~~~~~-~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNN--EFKTFDGIDVCGERLAEEILEHIKDYE-SKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccc--ccccchhhHHHHHHHHHHHHHhccccc-ccccc
Confidence 4568999999999999999888887762 122112222222111 111223444444444444433332211 12358
Q ss_pred eEEEEeChHHHHHHHHHH
Q 020199 141 VAVMGHSRGGQTAFALSL 158 (329)
Q Consensus 141 i~l~GhS~GG~~a~~~a~ 158 (329)
|.++|||+||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999866554
No 148
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.17 E-value=2.6e-05 Score=67.68 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=76.4
Q ss_pred CCccEEEEECCCCCChHH-HHHHHHHHHhCCc--EEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCC
Q 020199 62 GTFNVILFLHGTSLSNKS-YSKIFDHIASHGF--IVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANV 138 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~--~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~ 138 (329)
....++||+||+..+.+. ....++.....|| .++.+.||+.+....-..+..........+.+.+..+... ...
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~---~~~ 92 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA---PGI 92 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc---cCC
Confidence 356799999999998654 2333333333344 7888998877654311112222333333344444333211 145
Q ss_pred cceEEEEeChHHHHHHHHHHhcc-----------ccEEEEeccCCCCCCCCCCCCcccccCcc-CCCCCeEEEecCCCCC
Q 020199 139 SLVAVMGHSRGGQTAFALSLRYG-----------FGAVIGLDPVAGTSKTTGLDPSILSFDSF-DFSIPVTVIGTGLGGV 206 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~~~-----------v~~~v~~~p~~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~~G~~ 206 (329)
.+|.+++||||+.+.+.+..... +..+++..|-...+...... ..+ ....++.+.+ ...
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~------~~~~~~~~~itvy~---s~~ 163 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQL------PDLGSSARRITVYY---SRN 163 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHH------HHHhhcCCCEEEEE---cCC
Confidence 79999999999999988765422 56677777644322110000 111 4457888888 444
Q ss_pred cc
Q 020199 207 AR 208 (329)
Q Consensus 207 D~ 208 (329)
|.
T Consensus 164 D~ 165 (233)
T PF05990_consen 164 DR 165 (233)
T ss_pred ch
Confidence 65
No 149
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.17 E-value=3.8e-05 Score=68.62 Aligned_cols=119 Identities=14% Similarity=0.077 Sum_probs=75.9
Q ss_pred eeEEEEeecCCCCCCCCCeeEEEEe-cCCCCCccEEEEECCCCCChHHH-------HHHHHHHHhCCcEEEEecCCCCCC
Q 020199 33 STKRITLETSSPSSPPPPKPLIIVT-PAGKGTFNVILFLHGTSLSNKSY-------SKIFDHIASHGFIVVAPQLYTSIP 104 (329)
Q Consensus 33 ~v~~~~~~~~~~~~~~~~~~~~l~~-P~~~~~~p~vi~~HG~~~~~~~~-------~~~~~~la~~G~~Vv~~d~~g~~~ 104 (329)
.+.+..+++. +..++..... |. ..+...|+++-|.++..+.. ..+.+..-..|-+|+.+++||.+.
T Consensus 111 ~~kRv~Iq~D-----~~~IDt~~I~~~~-a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 111 SVKRVPIQYD-----GVKIDTMAIHQPE-AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred ceeeEEEeeC-----CEEEEEEEeeCCC-CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 4455555553 5566655443 44 34567899999998876652 234444445689999999999998
Q ss_pred CCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 105 PPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
|.+.. ...++-.....+.+.+. ....++..++|++.|||+||.++..++....
T Consensus 185 S~G~~-s~~dLv~~~~a~v~yL~---d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 185 STGPP-SRKDLVKDYQACVRYLR---DEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHH---hcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 87333 33333322222222222 1233557789999999999999988766654
No 150
>PRK04940 hypothetical protein; Provisional
Probab=98.16 E-value=2.1e-05 Score=64.65 Aligned_cols=91 Identities=12% Similarity=0.016 Sum_probs=58.3
Q ss_pred cceEEEEeChHHHHHHHHHHhccccEEEEeccCCCCCC----CCCCCCc--cccc---CccCCCCCe--EEEecCCCCCc
Q 020199 139 SLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSK----TTGLDPS--ILSF---DSFDFSIPV--TVIGTGLGGVA 207 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~~~----~~~~~~~--~~~~---~~~~i~~P~--Lii~~~~G~~D 207 (329)
++++++|.|+||+.|..++.++.++++ +++|...+.. .-..... .+.. +.++++.|- +++. .+.|
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aV-LiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vll---q~gD 135 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQV-IFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVIL---SRND 135 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEE-EECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEEE---eCCC
Confidence 469999999999999999999988765 6777665521 0000000 0000 233455554 7777 5556
Q ss_pred ccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 208 RCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
.+ ..+++..+....-. ...+.+|++|
T Consensus 136 Ev--------LDyr~a~~~y~~~y-~~~v~~GGdH 161 (180)
T PRK04940 136 EV--------LDSQRTAEELHPYY-EIVWDEEQTH 161 (180)
T ss_pred cc--------cCHHHHHHHhccCc-eEEEECCCCC
Confidence 65 45666676666654 5778888889
No 151
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.16 E-value=5.8e-05 Score=65.44 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=88.0
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEecCC---CCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEE-ecCCC------
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVTPAG---KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVA-PQLYT------ 101 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~-~d~~g------ 101 (329)
+......+...+ -++..+++++.|+. ++++|||.|+-|...-......+...++..=..+++ +.+..
T Consensus 7 ~~~~~~~l~s~~---~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~vf~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~ 83 (264)
T COG2819 7 PHFRERDLKSAN---TGRKYRIFIATPKNYPKPGGYPVLYMLDGNAVFNALTEIMLRILADLPPPVIVGIGYETILVFDP 83 (264)
T ss_pred ccceeEeeeecC---CCcEEEEEecCCCCCCCCCCCcEEEEecchhhhchHHHHhhhhhhcCCCceEEEecccccccccc
Confidence 344455555544 47889999999973 334788888877655433333334555544322222 22211
Q ss_pred ----CCC--CCC------C----ccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--cc
Q 020199 102 ----SIP--PPS------A----TNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FG 163 (329)
Q Consensus 102 ----~~~--~~~------~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~ 163 (329)
... ... . ...-.....+.++|.+.+...++....++.++.+++|||+||..++.....+| +.
T Consensus 84 ~~r~~DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~ 163 (264)
T COG2819 84 NRRAYDYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFG 163 (264)
T ss_pred ccccccCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhc
Confidence 000 000 0 00111356778888888887777778889999999999999999999999997 88
Q ss_pred EEEEeccCC
Q 020199 164 AVIGLDPVA 172 (329)
Q Consensus 164 ~~v~~~p~~ 172 (329)
+.++++|..
T Consensus 164 ~y~~~SPSl 172 (264)
T COG2819 164 RYGLISPSL 172 (264)
T ss_pred eeeeecchh
Confidence 888888854
No 152
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.16 E-value=2.2e-05 Score=74.13 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=62.1
Q ss_pred CChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHH
Q 020199 75 LSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAF 154 (329)
Q Consensus 75 ~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~ 154 (329)
.....|..+.+.|++.||.+ ..|++|.+... +.. .......+.+.+.+++.... ....++.++||||||.++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDw-R~~--~~~~~~~~~Lk~lIe~~~~~---~g~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDF-RQS--NRLPETMDGLKKKLETVYKA---SGGKKVNIISHSMGGLLVK 177 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCc-ccc--ccHHHHHHHHHHHHHHHHHH---cCCCCEEEEEECHhHHHHH
Confidence 34466889999999999876 78999988765 332 11233334444444433221 1457899999999999999
Q ss_pred HHHHhcc------ccEEEEecc
Q 020199 155 ALSLRYG------FGAVIGLDP 170 (329)
Q Consensus 155 ~~a~~~~------v~~~v~~~p 170 (329)
.++..++ |+.+|.+++
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECC
Confidence 9888766 788887764
No 153
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.14 E-value=1.7e-05 Score=69.35 Aligned_cols=99 Identities=16% Similarity=0.136 Sum_probs=76.5
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
|+|+++|+.+|....|..++..|... ..|+..+.+|.+... .....+.++++...+.+.+.- ...++.++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~Q------P~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQ------PEGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhC------CCCCEEEE
Confidence 57999999999999999999999988 999999999986432 233455555555555555442 23479999
Q ss_pred EeChHHHHHHHHHHhcc-----ccEEEEeccCCC
Q 020199 145 GHSRGGQTAFALSLRYG-----FGAVIGLDPVAG 173 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~-----v~~~v~~~p~~~ 173 (329)
|+|+||.+|+.+|.+-. +.-++++|+...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999988754 777888887655
No 154
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.14 E-value=2.5e-05 Score=71.51 Aligned_cols=104 Identities=13% Similarity=0.025 Sum_probs=64.0
Q ss_pred eeEEEEecCCCC-CccEEEEECCCCCCh-----HHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccc-hHHHHHHHHH
Q 020199 51 KPLIIVTPAGKG-TFNVILFLHGTSLSN-----KSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELN-SAAEVAEWLP 123 (329)
Q Consensus 51 ~~~~l~~P~~~~-~~p~vi~~HG~~~~~-----~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~-~~~~~~~~l~ 123 (329)
.....|.|.... -.+.++++|-+-... ..-.++.+.|.++|+.|.++++++..... ...... .+.+.+....
T Consensus 93 ~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~-~~~~~edYi~e~l~~ai 171 (445)
T COG3243 93 LELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASL-AAKNLEDYILEGLSEAI 171 (445)
T ss_pred hhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhh-hhccHHHHHHHHHHHHH
Confidence 333446676443 345566666665422 22357789999999999999998876665 222221 2212222222
Q ss_pred HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 124 QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 124 ~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
+.+.+. ...++|-++|+|.||.++..+++..+
T Consensus 172 d~v~~i------tg~~~InliGyCvGGtl~~~ala~~~ 203 (445)
T COG3243 172 DTVKDI------TGQKDINLIGYCVGGTLLAAALALMA 203 (445)
T ss_pred HHHHHH------hCccccceeeEecchHHHHHHHHhhh
Confidence 222222 13468999999999999988887765
No 155
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.11 E-value=9e-05 Score=70.35 Aligned_cols=195 Identities=14% Similarity=0.144 Sum_probs=110.2
Q ss_pred CccEEEEECCCCC---ChHHHHHHHHHHHhCC--cEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhh-hcCCCccC
Q 020199 63 TFNVILFLHGTSL---SNKSYSKIFDHIASHG--FIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQ-NLPENTEA 136 (329)
Q Consensus 63 ~~p~vi~~HG~~~---~~~~~~~~~~~la~~G--~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~ 136 (329)
..|++|+.||... ..+.+..+-+.|.-.| .-|..+|++.. .+ . ..+...++.+..+... .++-...+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~--ig-G----~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP--IG-G----ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC--CC-C----cchHHHHHHHHHHhhhhhhhhhccC
Confidence 3589999999982 2333444444444444 33334444221 11 1 1233333333332221 11112334
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc---ccEEEEec-cCCCCCCCCCCCCcccccCcc-CCCCCeEEEecCCCCCcccCc
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLD-PVAGTSKTTGLDPSILSFDSF-DFSIPVTVIGTGLGGVARCIT 211 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~-p~~~~~~~~~~~~~~~~~~~~-~i~~P~Lii~~~~G~~D~~~~ 211 (329)
....|.++|.|||+.++......+. |.++|++. |....+-.+.... +.+ .++.|+|++. |..|...+
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirD-----E~Lldmk~PVLFV~---Gsnd~mcs 319 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRD-----EALLDMKQPVLFVI---GSNDHMCS 319 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcc-----hhhHhcCCceEEEe---cCCcccCC
Confidence 5678999999999777766665554 88988887 3332221111111 222 7899999999 77798866
Q ss_pred cCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHc
Q 020199 212 ACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFY 290 (329)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~ 290 (329)
++ ...++-+++.... .++++.+++|..-.... ..+..| .....+...+...|.+|....|.
T Consensus 320 pn-----~ME~vreKMqA~~-elhVI~~adhsmaipk~-----------k~eseg-ltqseVd~~i~~aI~efvt~~l~ 380 (784)
T KOG3253|consen 320 PN-----SMEEVREKMQAEV-ELHVIGGADHSMAIPKR-----------KVESEG-LTQSEVDSAIAQAIKEFVTIALN 380 (784)
T ss_pred HH-----HHHHHHHHhhccc-eEEEecCCCccccCCcc-----------cccccc-ccHHHHHHHHHHHHHHHHHHhhc
Confidence 54 3555677888888 89999999995443221 111122 23455555666666666666555
No 156
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.08 E-value=0.00014 Score=63.97 Aligned_cols=183 Identities=14% Similarity=0.146 Sum_probs=98.3
Q ss_pred CCCeeEEEEecCC---CCCccEEEEECCCCCChH-HHHHHHHHHHhC----CcEEEEecCCCCCCCCCCccccchHHHHH
Q 020199 48 PPPKPLIIVTPAG---KGTFNVILFLHGTSLSNK-SYSKIFDHIASH----GFIVVAPQLYTSIPPPSATNELNSAAEVA 119 (329)
Q Consensus 48 ~~~~~~~l~~P~~---~~~~p~vi~~HG~~~~~~-~~~~~~~~la~~----G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~ 119 (329)
..+.+..+|.|.+ ..++|++++.||-..-.. ......+.|... .-+++.+|.-.-.. +........+..
T Consensus 79 ~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~---R~~~~~~n~~~~ 155 (299)
T COG2382 79 LSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKK---RREELHCNEAYW 155 (299)
T ss_pred ccceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHH---HHHHhcccHHHH
Confidence 4677778888874 346899999998544221 122334444443 46777776532100 111112222333
Q ss_pred HHHHH----HhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCCCCCCC---CCCcccccCcc
Q 020199 120 EWLPQ----GLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGTSKTTG---LDPSILSFDSF 190 (329)
Q Consensus 120 ~~l~~----~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~~~~~~---~~~~~~~~~~~ 190 (329)
+.+.+ .+++..+... +.+.-+++|.|+||.+++.++..+| +..++..+|...-..... ....... +..
T Consensus 156 ~~L~~eLlP~v~~~yp~~~--~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l-~~~ 232 (299)
T COG2382 156 RFLAQELLPYVEERYPTSA--DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESL-KIL 232 (299)
T ss_pred HHHHHHhhhhhhccCcccc--cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhh-hhh
Confidence 33333 2333222211 4456799999999999999999999 888888887654321111 1111100 111
Q ss_pred -CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCc
Q 020199 191 -DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGH 242 (329)
Q Consensus 191 -~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH 242 (329)
.+.....++....++.+.+.+|+ ......++...-+. .+-.++| ||
T Consensus 233 ~a~~~~~~~~l~~g~~~~~~~~pN----r~L~~~L~~~g~~~-~yre~~G-gH 279 (299)
T COG2382 233 HAIGTDERIVLTTGGEEGDFLRPN----RALAAQLEKKGIPY-YYREYPG-GH 279 (299)
T ss_pred hccCccceEEeecCCccccccchh----HHHHHHHHhcCCcc-eeeecCC-CC
Confidence 22333323333335566665544 23334455555556 7778888 99
No 157
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.00 E-value=0.00035 Score=61.51 Aligned_cols=118 Identities=18% Similarity=0.210 Sum_probs=74.5
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChHH-HHHH-----HHHHHhCCcEEEEecCCCCCCCCC-Cc--cccchHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNKS-YSKI-----FDHIASHGFIVVAPQLYTSIPPPS-AT--NELNSAAEV 118 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~-~~~~-----~~~la~~G~~Vv~~d~~g~~~~~~-~~--~~~~~~~~~ 118 (329)
-..+.+.++-... ++.|++|=.|..|.+... |..+ .+.+.++ |.++-+|.||...-.. .+ ....++.+.
T Consensus 8 ~G~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~L 85 (283)
T PF03096_consen 8 YGSVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQL 85 (283)
T ss_dssp TEEEEEEEESS---TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHH
T ss_pred ceEEEEEEEecCC-CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHH
Confidence 3467777774443 268999999999998766 4433 4556555 9999999999744320 12 235567777
Q ss_pred HHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 119 AEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 119 ~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
.+.+...++.+ ..+.+.-+|--.|+++-.++|..+| +.++|+++|....
T Consensus 86 Ae~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~ 136 (283)
T PF03096_consen 86 AEMLPEVLDHF-------GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA 136 (283)
T ss_dssp HCTHHHHHHHH-------T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-
T ss_pred HHHHHHHHHhC-------CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC
Confidence 77777777776 6788999999999999999999998 9999999976554
No 158
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.99 E-value=3.7e-05 Score=82.97 Aligned_cols=99 Identities=19% Similarity=0.111 Sum_probs=75.3
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
..|.++++||++++...|..+++.|.. ++.|+.++.+|.+... ....++.++.+.+...+.... ...++.
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~------~~~p~~ 1136 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQ------PHGPYH 1136 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhC------CCCCEE
Confidence 357899999999999999999999965 4999999999986542 223466677777666665431 124799
Q ss_pred EEEeChHHHHHHHHHHhc---c--ccEEEEeccC
Q 020199 143 VMGHSRGGQTAFALSLRY---G--FGAVIGLDPV 171 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~---~--v~~~v~~~p~ 171 (329)
++||||||.++..+|.+. + +..++++++.
T Consensus 1137 l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1137 LLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999998853 2 6777777653
No 159
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.93 E-value=8.3e-05 Score=66.11 Aligned_cols=210 Identities=17% Similarity=0.200 Sum_probs=113.4
Q ss_pred CCeeEEEEecCCC---CCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecC----------CCCCCCCCCccccc--
Q 020199 49 PPKPLIIVTPAGK---GTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQL----------YTSIPPPSATNELN-- 113 (329)
Q Consensus 49 ~~~~~~l~~P~~~---~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~----------~g~~~~~~~~~~~~-- 113 (329)
..+...++.|... ++.|.+++.||+++........+..++.+++.++..+. +|...+........
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 5577788888754 57899999999999887765688899999999888875 11111110000000
Q ss_pred ----hHHHHHHHHHHH-hh------------------hhcCCCc-cCCCcceEEEEeChHHHHHHHHHHhc----c--cc
Q 020199 114 ----SAAEVAEWLPQG-LQ------------------QNLPENT-EANVSLVAVMGHSRGGQTAFALSLRY----G--FG 163 (329)
Q Consensus 114 ----~~~~~~~~l~~~-~~------------------~~~~~~~-~~d~~~i~l~GhS~GG~~a~~~a~~~----~--v~ 163 (329)
........-... .. ....... ..+..++.++|.|+||..++...... . +.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~ 190 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELID 190 (299)
T ss_pred heeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhh
Confidence 000000000000 00 0000000 11345788888888888877755431 1 22
Q ss_pred EEEEeccCCCC---C-CCCCCCCc---cccc---Ccc-CCC-CCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccC-C
Q 020199 164 AVIGLDPVAGT---S-KTTGLDPS---ILSF---DSF-DFS-IPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKN-S 230 (329)
Q Consensus 164 ~~v~~~p~~~~---~-~~~~~~~~---~~~~---~~~-~i~-~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~-~ 230 (329)
.++.-.+.... . ........ .... ... .+. +|+|+++ |..|.++|.. ...+.+..... +
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~---G~~D~~vp~~-----~~~~~~~~~~~~~ 262 (299)
T COG1073 191 YLITPGGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVH---GERDEVVPLR-----DAEDLYEAARERP 262 (299)
T ss_pred hhccCCCCCCCCcccccccccccchhhhccCcchhhHhhcCCcceEEEe---cCCCcccchh-----hhHHHHhhhccCC
Confidence 22211111110 0 00000010 1111 222 565 7999999 8889988754 34455677766 5
Q ss_pred CeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHH
Q 020199 231 SRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 289 (329)
Q Consensus 231 ~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L 289 (329)
. ..+++++++|.... +.....+.....+..||.++|
T Consensus 263 ~-~~~~~~~~~H~~~~----------------------~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 263 K-KLLFVPGGGHIDLY----------------------DNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred c-eEEEecCCcccccc----------------------CccHHHHHHHHHHHHHHHHhc
Confidence 5 88899999995442 122233456667888988876
No 160
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.88 E-value=0.0016 Score=59.88 Aligned_cols=200 Identities=19% Similarity=0.219 Sum_probs=117.5
Q ss_pred eEEEEecCC-CCCccEEEEECCCCC------ChHHHHHHHHHHHhC-CcEEEEecC-CCC-------CCCCCCccc----
Q 020199 52 PLIIVTPAG-KGTFNVILFLHGTSL------SNKSYSKIFDHIASH-GFIVVAPQL-YTS-------IPPPSATNE---- 111 (329)
Q Consensus 52 ~~~l~~P~~-~~~~p~vi~~HG~~~------~~~~~~~~~~~la~~-G~~Vv~~d~-~g~-------~~~~~~~~~---- 111 (329)
.+.|+.|.. ......++++.|+.. .......++..+|.. |-+|+.+.. |.. +.+. .++.
T Consensus 51 ~l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r-~ED~iIAy 129 (367)
T PF10142_consen 51 WLTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPR-TEDAIIAY 129 (367)
T ss_pred EEEEEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccc-cHHHHHHH
Confidence 367889987 666778888888761 112234556666654 666666553 211 1111 0000
Q ss_pred ----------------cc---hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEec-c
Q 020199 112 ----------------LN---SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLD-P 170 (329)
Q Consensus 112 ----------------~~---~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~-p 170 (329)
.. ......|.+.+++.+ ...++.++.+|.|.|-=|.++..+|..++ |+|++-+- +
T Consensus 130 tW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~----~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid 205 (367)
T PF10142_consen 130 TWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKK----KFGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVID 205 (367)
T ss_pred HHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHh----hcCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEc
Confidence 00 111223333333322 34557889999999999999999999766 77766332 1
Q ss_pred CCCC-------------------------CCCCCCCCccccc-----Ccc----CCCCCeEEEecCCCCCcccCccCCCC
Q 020199 171 VAGT-------------------------SKTTGLDPSILSF-----DSF----DFSIPVTVIGTGLGGVARCITACAPE 216 (329)
Q Consensus 171 ~~~~-------------------------~~~~~~~~~~~~~-----~~~----~i~~P~Lii~~~~G~~D~~~~~~~~~ 216 (329)
..+. .....+..+.+.. +.+ ++++|.++|. +..|..+.|.
T Consensus 206 ~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~---atgDeFf~pD--- 279 (367)
T PF10142_consen 206 VLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIIN---ATGDEFFVPD--- 279 (367)
T ss_pred cCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEe---cCCCceeccC---
Confidence 1111 0000000000000 222 7899999999 6668877665
Q ss_pred CCCHHHHHHHccCCCeeEEEeccCCcccccCCCCccchhcccccccccCCCCCchhHHHHhhHHHHHHHHHHHcCCh
Q 020199 217 GANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDA 293 (329)
Q Consensus 217 ~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~L~~~~ 293 (329)
...-++..+++.+ .+.++|+++|... . ..+..-+.+|+++.+.+.+
T Consensus 280 --~~~~y~d~L~G~K-~lr~vPN~~H~~~-----------------------~-----~~~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 280 --SSNFYYDKLPGEK-YLRYVPNAGHSLI-----------------------G-----SDVVQSLRAFYNRIQNGRP 325 (367)
T ss_pred --chHHHHhhCCCCe-eEEeCCCCCcccc-----------------------h-----HHHHHHHHHHHHHHHcCCC
Confidence 2345678888876 9999999999311 1 3445568999998877764
No 161
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.86 E-value=0.00013 Score=69.85 Aligned_cols=126 Identities=15% Similarity=0.105 Sum_probs=77.5
Q ss_pred CCCeeEEEEecC-CCCCccEEEEECCCCCChHHHHHHHH------------------HHHhCCcEEEEecCC-CCCCCCC
Q 020199 48 PPPKPLIIVTPA-GKGTFNVILFLHGTSLSNKSYSKIFD------------------HIASHGFIVVAPQLY-TSIPPPS 107 (329)
Q Consensus 48 ~~~~~~~l~~P~-~~~~~p~vi~~HG~~~~~~~~~~~~~------------------~la~~G~~Vv~~d~~-g~~~~~~ 107 (329)
+..+..+.+... ...+.|+||+++|+.|++..+..+.+ .+.+. ..++.+|.| |.|.+..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccC
Confidence 445555555443 34567999999999998765422211 13333 677788864 6555531
Q ss_pred -CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc------------cccEEEEeccCCCC
Q 020199 108 -ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY------------GFGAVIGLDPVAGT 174 (329)
Q Consensus 108 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~------------~v~~~v~~~p~~~~ 174 (329)
......+..+..+.+.+.+...+.........++.++|||+||+.+..+|..- ++++++..+++..+
T Consensus 139 ~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 139 DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 11112233445555555555444333344567899999999999888877652 17888888877644
No 162
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.84 E-value=0.00011 Score=65.40 Aligned_cols=156 Identities=15% Similarity=0.111 Sum_probs=95.6
Q ss_pred CCCeeEEEE--ecCCCC-CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHH
Q 020199 48 PPPKPLIIV--TPAGKG-TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQ 124 (329)
Q Consensus 48 ~~~~~~~l~--~P~~~~-~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~ 124 (329)
+.+++.-.. +|...+ ...+||.+-|..|-.+. .....=++.||.|+.++|+|...|.+-+....+.. .+|-+.+
T Consensus 224 gneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~n-A~DaVvQ 300 (517)
T KOG1553|consen 224 GNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLN-AADAVVQ 300 (517)
T ss_pred CcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchH-HHHHHHH
Confidence 556655444 333332 24688888887664321 11222346799999999999998875555444433 2444444
Q ss_pred HhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-ccEEEEeccCCCCCCC-CCCCCcccc--------------cC
Q 020199 125 GLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDPVAGTSKT-TGLDPSILS--------------FD 188 (329)
Q Consensus 125 ~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p~~~~~~~-~~~~~~~~~--------------~~ 188 (329)
+.-+.+ ++..+.|.+.|+|.||..++++|..+| ++++|+-..++..-.. -...|..+. ..
T Consensus 301 fAI~~L----gf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh~NLnna 376 (517)
T KOG1553|consen 301 FAIQVL----GFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNHMNLNNA 376 (517)
T ss_pred HHHHHc----CCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHhcccchH
Confidence 333322 335678999999999999999999999 9999876655432100 000000000 01
Q ss_pred c-c-CCCCCeEEEecCCCCCcccCccC
Q 020199 189 S-F-DFSIPVTVIGTGLGGVARCITAC 213 (329)
Q Consensus 189 ~-~-~i~~P~Lii~~~~G~~D~~~~~~ 213 (329)
+ + +.+-|+++|- -..|.++...
T Consensus 377 ell~ry~GPi~lIR---Rt~dEIitt~ 400 (517)
T KOG1553|consen 377 ELLARYKGPIRLIR---RTQDEIITTA 400 (517)
T ss_pred HHHHhhcCchhHhh---hhhHhhhhcc
Confidence 2 2 7788999999 7778875544
No 163
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.84 E-value=0.00026 Score=64.87 Aligned_cols=115 Identities=13% Similarity=0.166 Sum_probs=68.8
Q ss_pred eEEEEe-cCC--CCCccEEEEECCCCCCh----HHH---HHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHH
Q 020199 52 PLIIVT-PAG--KGTFNVILFLHGTSLSN----KSY---SKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEW 121 (329)
Q Consensus 52 ~~~l~~-P~~--~~~~p~vi~~HG~~~~~----~~~---~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~ 121 (329)
..+++. |.. ++..|+||++||+|-.- ..+ ..+...|- ...++++|+--.........-...+.+.+..
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~ 184 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVAT 184 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHH
Confidence 367776 764 34469999999998632 222 22333333 4688999884332000000111233333333
Q ss_pred HHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-------ccEEEEeccCCCCC
Q 020199 122 LPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDPVAGTS 175 (329)
Q Consensus 122 l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-------v~~~v~~~p~~~~~ 175 (329)
....++.. +.++|.++|-|+||.+++.+...-. -+.+++++||....
T Consensus 185 Y~~Lv~~~-------G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 185 YDYLVESE-------GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHhcc-------CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 33333222 5689999999999999998765422 58899999998764
No 164
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.84 E-value=8e-05 Score=63.60 Aligned_cols=103 Identities=17% Similarity=0.316 Sum_probs=69.7
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCC-----cEEEEecCCCCCCCCC-------C-------ccccchHHHHHHHHHHH
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHG-----FIVVAPQLYTSIPPPS-------A-------TNELNSAAEVAEWLPQG 125 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G-----~~Vv~~d~~g~~~~~~-------~-------~~~~~~~~~~~~~l~~~ 125 (329)
-+.||+||.+|+......++..|.+.+ -.++.+|--|.-...+ . ............|+...
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 356899999999999999999998875 3456666555311110 0 01112334446677666
Q ss_pred hhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-------ccEEEEecc
Q 020199 126 LQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDP 170 (329)
Q Consensus 126 ~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-------v~~~v~~~p 170 (329)
+..+-. ..+..++-++||||||.....++..+. +..+|.++.
T Consensus 126 msyL~~---~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~g 174 (288)
T COG4814 126 MSYLQK---HYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAG 174 (288)
T ss_pred HHHHHH---hcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecc
Confidence 655422 237789999999999999999988764 777777663
No 165
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.83 E-value=0.00056 Score=58.39 Aligned_cols=119 Identities=14% Similarity=0.169 Sum_probs=81.4
Q ss_pred CCCeeEEEEecC---CCCCccEEEEECCCCCChHHHHHHHHHHHhC-C--cEEEEecCCCCCCCCC--------Cccccc
Q 020199 48 PPPKPLIIVTPA---GKGTFNVILFLHGTSLSNKSYSKIFDHIASH-G--FIVVAPQLYTSIPPPS--------ATNELN 113 (329)
Q Consensus 48 ~~~~~~~l~~P~---~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~-G--~~Vv~~d~~g~~~~~~--------~~~~~~ 113 (329)
+.+.....+.|. ...+.+.+++++|..|....|..++++|-+. + +.++.+.+.|+..... ...+..
T Consensus 10 gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eif 89 (301)
T KOG3975|consen 10 GLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIF 89 (301)
T ss_pred CCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccccccccccc
Confidence 444555555554 3356799999999999999999999988764 2 4477777766532210 112344
Q ss_pred hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccC
Q 020199 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPV 171 (329)
Q Consensus 114 ~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~ 171 (329)
+.++.++.-.++++..++ ...+|.++|||-|+++.+.+..... ++.++++-|.
T Consensus 90 sL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred chhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 566666666667776655 3468999999999999999987543 5555555553
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=97.70 E-value=7.3e-05 Score=67.48 Aligned_cols=114 Identities=20% Similarity=0.218 Sum_probs=66.4
Q ss_pred CCCccEEEEECCCCCChHH---HHHHHHHHHhCCcEEEEecCC--CCCCCC-----------C---Cccc-cch-HHHHH
Q 020199 61 KGTFNVILFLHGTSLSNKS---YSKIFDHIASHGFIVVAPQLY--TSIPPP-----------S---ATNE-LNS-AAEVA 119 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~---~~~~~~~la~~G~~Vv~~d~~--g~~~~~-----------~---~~~~-~~~-~~~~~ 119 (329)
.++.|+++++||..++... ...+-+.....|++++++|-. +.+... . .... ... ....-
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 3578999999999987533 234455666789999998542 211110 0 0000 000 12233
Q ss_pred HHHHHHhhhhcCCCccCCC--cceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 120 EWLPQGLQQNLPENTEANV--SLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 120 ~~l~~~~~~~~~~~~~~d~--~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
++|...+-+.+......+. ++.+++||||||+.|+.+|..+| ++.+..++|...+
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 3333333322222222233 38999999999999999999996 6665555554433
No 167
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.62 E-value=0.0018 Score=61.03 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=55.5
Q ss_pred CCCccEEEEEC------CCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCc
Q 020199 61 KGTFNVILFLH------GTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENT 134 (329)
Q Consensus 61 ~~~~p~vi~~H------G~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 134 (329)
..+.|.||+=+ |.||-.. -+.+...| +.|+.|+.+.+.-...+. ..+.++........+.+....+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~-dSevG~AL-~~GHPvYFV~F~p~P~pg---QTl~DV~~ae~~Fv~~V~~~hp--- 137 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKP-DSEVGVAL-RAGHPVYFVGFFPEPEPG---QTLEDVMRAEAAFVEEVAERHP--- 137 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCc-ccHHHHHH-HcCCCeEEEEecCCCCCC---CcHHHHHHHHHHHHHHHHHhCC---
Confidence 45678888865 3334333 24555556 459999998876544443 2233333322222222333321
Q ss_pred cCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 135 EANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 135 ~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
+..+..++|-|.||..++.+|+..|
T Consensus 138 --~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 138 --DAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred --CCCCceEEeccHHHHHHHHHHhcCc
Confidence 4448999999999999999999998
No 168
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.60 E-value=0.00019 Score=65.75 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=70.7
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcE---EEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFI---VVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~---Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
.-.++++||+++....+..+...+++.|+. +..+++.+..... ......+.....+.+.+... ...+
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~ql~~~V~~~l~~~-------ga~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY---SLAVRGEQLFAYVDEVLAKT-------GAKK 128 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc---cccccHHHHHHHHHHHHhhc-------CCCc
Confidence 348999999988888898888889988988 8888887652221 12233444455555544333 4578
Q ss_pred eEEEEeChHHHHHHHHHHhcc----ccEEEEecc
Q 020199 141 VAVMGHSRGGQTAFALSLRYG----FGAVIGLDP 170 (329)
Q Consensus 141 i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p 170 (329)
|.++||||||..+..++...+ |+.++.+.+
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 999999999999998888776 777777664
No 169
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.56 E-value=0.00032 Score=68.81 Aligned_cols=106 Identities=18% Similarity=0.238 Sum_probs=74.0
Q ss_pred CCCeeEEEEecCCCCC--ccEEEEECCCCCChHH---H--HHHHHHHHhCCcEEEEecCCCC-------CCCC-CCcccc
Q 020199 48 PPPKPLIIVTPAGKGT--FNVILFLHGTSLSNKS---Y--SKIFDHIASHGFIVVAPQLYTS-------IPPP-SATNEL 112 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~--~p~vi~~HG~~~~~~~---~--~~~~~~la~~G~~Vv~~d~~g~-------~~~~-~~~~~~ 112 (329)
..-+.+.||.|....+ .|+++++||++-.... + ......+..+..+||.+++|-. +.+. ......
T Consensus 94 EDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl 173 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGL 173 (545)
T ss_pred CCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccH
Confidence 4568889999985543 8999999998752222 2 2223345556789999998542 1111 023344
Q ss_pred chHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHH
Q 020199 113 NSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSL 158 (329)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~ 158 (329)
.|+...++|+.+.+... +-|+++|.++|||.||..+..+..
T Consensus 174 ~Dq~~AL~wv~~~I~~F-----GGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 174 FDQLLALRWVKDNIPSF-----GGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHHHHHHHHHHhc-----CCCCCeEEEEeechhHHHHHHHhc
Confidence 57888899999988776 238899999999999999877655
No 170
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.53 E-value=0.0037 Score=57.11 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=61.4
Q ss_pred CCeeEEEEecCCCC-CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecC-CCCCCCCCCccccchHHHHHHHHHHHh
Q 020199 49 PPKPLIIVTPAGKG-TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQL-YTSIPPPSATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 49 ~~~~~~l~~P~~~~-~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~-~g~~~~~~~~~~~~~~~~~~~~l~~~~ 126 (329)
.++.+-.+ |...+ ...+-||..|-||=.+--...+++|+++|+.|+.+|. |.++..........|+..++++...
T Consensus 245 eaLPV~e~-~a~~~~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~-- 321 (456)
T COG3946 245 EALPVVEV-PAKPGNSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYAR-- 321 (456)
T ss_pred CCCCceee-ccCCCCcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHH--
Confidence 34444333 44333 4566778888777665557889999999999999996 3333332011112223332222222
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
.+ ...++.++|+|+|+-+--.+..+.+
T Consensus 322 -~w-------~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 322 -RW-------GAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred -hh-------CcceEEEEeecccchhhHHHHHhCC
Confidence 23 5678999999999987655544444
No 171
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.43 E-value=0.0018 Score=63.62 Aligned_cols=112 Identities=16% Similarity=0.125 Sum_probs=59.1
Q ss_pred CCCeeEEEEecCC--------CCCccEEEEECCCCCChHHHHHHHHHHHh----------------CCcEEEEecCCCCC
Q 020199 48 PPPKPLIIVTPAG--------KGTFNVILFLHGTSLSNKSYSKIFDHIAS----------------HGFIVVAPQLYTSI 103 (329)
Q Consensus 48 ~~~~~~~l~~P~~--------~~~~p~vi~~HG~~~~~~~~~~~~~~la~----------------~G~~Vv~~d~~g~~ 103 (329)
......++|.... +-..-+|+|++|..|+...-+.++..... ..|.-.++|+-+.-
T Consensus 65 a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~ 144 (973)
T KOG3724|consen 65 ADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF 144 (973)
T ss_pred CCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh
Confidence 4567777776641 12356799999999998887777665542 11344444432210
Q ss_pred CCC-C--CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc
Q 020199 104 PPP-S--ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 104 ~~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
.-- + -.+..+...+.+..+.+..+.- ++....-+..|.++||||||.+|..++...
T Consensus 145 tAm~G~~l~dQtEYV~dAIk~ILslYr~~-~e~~~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 145 TAMHGHILLDQTEYVNDAIKYILSLYRGE-REYASPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred hhhccHhHHHHHHHHHHHHHHHHHHhhcc-cccCCCCCceEEEEeccchhHHHHHHHhhh
Confidence 000 0 0011112222333333322220 011112366799999999999988776543
No 172
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.39 E-value=0.003 Score=58.25 Aligned_cols=56 Identities=13% Similarity=0.105 Sum_probs=42.3
Q ss_pred CCCCeeEEEEecCCCCCccEEEEECCCCCChHH--HHHHHHHHHhC-CcEEEEecCCCC
Q 020199 47 PPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKS--YSKIFDHIASH-GFIVVAPQLYTS 102 (329)
Q Consensus 47 ~~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~--~~~~~~~la~~-G~~Vv~~d~~g~ 102 (329)
|...+...+.+...+....+|++++|+|++... +..+.+.+|+. +.+|+.+++.+.
T Consensus 18 R~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf 76 (403)
T PF11144_consen 18 RESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCF 76 (403)
T ss_pred ccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeehe
Confidence 477888888888777677899999999997754 56778888875 555566666443
No 173
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.31 E-value=0.0026 Score=57.44 Aligned_cols=108 Identities=15% Similarity=0.087 Sum_probs=58.4
Q ss_pred CccEEEEECCCCCChHH-HHHHHHHHHhCCc--EEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCc
Q 020199 63 TFNVILFLHGTSLSNKS-YSKIFDHIASHGF--IVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVS 139 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~--~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~ 139 (329)
...+++|+||+..+.++ -...++-..+.|+ +.+.+.|+..+.--.-..+..+.....+.|...++.+.... ...
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~---~~~ 191 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK---PVK 191 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC---CCc
Confidence 45799999999987654 2344454444443 44555555543321011111111111122222221111111 356
Q ss_pred ceEEEEeChHHHHHHHHHHhcc----------ccEEEEeccCCC
Q 020199 140 LVAVMGHSRGGQTAFALSLRYG----------FGAVIGLDPVAG 173 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~~~----------v~~~v~~~p~~~ 173 (329)
+|.+++||||..+++.+..+.- |+-+|+..|-..
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 8999999999999998876532 666777776443
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.17 E-value=0.0042 Score=59.15 Aligned_cols=106 Identities=19% Similarity=0.157 Sum_probs=58.4
Q ss_pred ccEEEEECCCCCChHHH---HHHHHHHHh-CCcEEEEecCCCCCCCCCCcccc-------chHHHHHHHHHHHhhhhcCC
Q 020199 64 FNVILFLHGTSLSNKSY---SKIFDHIAS-HGFIVVAPQLYTSIPPPSATNEL-------NSAAEVAEWLPQGLQQNLPE 132 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~---~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~ 132 (329)
.|++|++-| .+....+ ..+...||+ .|-.+++++||-.|.|. +-... -..++.+.++..+++.+...
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~-P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQ-PFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB--TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCC-CccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 677777744 4443321 224455655 58999999999998885 22111 13445555555444333211
Q ss_pred CccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 133 NTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 133 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
....+..+++++|-|+||.+|+++-.++| +.+.++-++.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccce
Confidence 11224568999999999999999999999 7777665543
No 175
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.13 E-value=0.0076 Score=51.93 Aligned_cols=100 Identities=20% Similarity=0.270 Sum_probs=58.8
Q ss_pred EEEEecCCCCCccEEEEECCCCC---ChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhh
Q 020199 53 LIIVTPAGKGTFNVILFLHGTSL---SNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQN 129 (329)
Q Consensus 53 ~~l~~P~~~~~~p~vi~~HG~~~---~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 129 (329)
.++..|.. +..+|-|+-|..- ..-.|+.+.+.|+++||.|++.-+.-. -+ ...-..++.......++.+
T Consensus 8 ~wvl~P~~--P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t--fD----H~~~A~~~~~~f~~~~~~L 79 (250)
T PF07082_consen 8 SWVLIPPR--PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT--FD----HQAIAREVWERFERCLRAL 79 (250)
T ss_pred cEEEeCCC--CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC--Cc----HHHHHHHHHHHHHHHHHHH
Confidence 36677763 4567777777543 334599999999999999999765221 11 1111222222222222221
Q ss_pred cCCCccCC--CcceEEEEeChHHHHHHHHHHhcc
Q 020199 130 LPENTEAN--VSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 130 ~~~~~~~d--~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
... ..++ .-++.-+|||+|+.+-+.+....+
T Consensus 80 ~~~-~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 80 QKR-GGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred HHh-cCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 111 1112 236788999999999888876654
No 176
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.13 E-value=0.0046 Score=51.79 Aligned_cols=87 Identities=23% Similarity=0.194 Sum_probs=58.3
Q ss_pred CChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHH
Q 020199 75 LSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAF 154 (329)
Q Consensus 75 ~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~ 154 (329)
+....|..++..|.. .+.|+.++.+|.+... .. ..+.....+.+...+.+.. ...++.++|||+||.++.
T Consensus 10 ~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~-~~--~~~~~~~~~~~~~~l~~~~------~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 10 SGPHEYARLAAALRG-RRDVSALPLPGFGPGE-PL--PASADALVEAQAEAVLRAA------GGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred CcHHHHHHHHHhcCC-CccEEEecCCCCCCCC-CC--CCCHHHHHHHHHHHHHHhc------CCCCeEEEEECHHHHHHH
Confidence 566778889998875 4899999999886543 11 1234444444333333221 235789999999999998
Q ss_pred HHHHhcc-----ccEEEEeccC
Q 020199 155 ALSLRYG-----FGAVIGLDPV 171 (329)
Q Consensus 155 ~~a~~~~-----v~~~v~~~p~ 171 (329)
.++.... +.+++.+++.
T Consensus 80 ~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 80 AVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHhCCCCCcEEEEEccC
Confidence 8887532 6777777643
No 177
>COG3150 Predicted esterase [General function prediction only]
Probab=97.00 E-value=0.0045 Score=49.75 Aligned_cols=89 Identities=22% Similarity=0.258 Sum_probs=57.3
Q ss_pred EEEECCCCCChHHHH--HHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 67 ILFLHGTSLSNKSYS--KIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 67 vi~~HG~~~~~~~~~--~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
|+++|||..+..... -+.+.+..++-.+-. + .+....+...+++.+.+.+.+. ....++++
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y--------~--~p~l~h~p~~a~~ele~~i~~~-------~~~~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEY--------S--TPHLPHDPQQALKELEKAVQEL-------GDESPLIV 64 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceee--------e--cCCCCCCHHHHHHHHHHHHHHc-------CCCCceEE
Confidence 799999998766544 334555555322111 1 1222235556666666666554 33459999
Q ss_pred EeChHHHHHHHHHHhccccEEEEeccCCC
Q 020199 145 GHSRGGQTAFALSLRYGFGAVIGLDPVAG 173 (329)
Q Consensus 145 GhS~GG~~a~~~a~~~~v~~~v~~~p~~~ 173 (329)
|-|.||+.|.+++....+++++ ++|...
T Consensus 65 GssLGGY~At~l~~~~Girav~-~NPav~ 92 (191)
T COG3150 65 GSSLGGYYATWLGFLCGIRAVV-FNPAVR 92 (191)
T ss_pred eecchHHHHHHHHHHhCChhhh-cCCCcC
Confidence 9999999999999998877754 555543
No 178
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.95 E-value=0.0094 Score=53.99 Aligned_cols=107 Identities=21% Similarity=0.199 Sum_probs=77.4
Q ss_pred CCCeeEEEEecC---CCCCccEEEEECCCCCChHHHHHHHHHHHhC---C------cEEEEecCCCCCCCCCCccccchH
Q 020199 48 PPPKPLIIVTPA---GKGTFNVILFLHGTSLSNKSYSKIFDHIASH---G------FIVVAPQLYTSIPPPSATNELNSA 115 (329)
Q Consensus 48 ~~~~~~~l~~P~---~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~---G------~~Vv~~d~~g~~~~~~~~~~~~~~ 115 (329)
|-.+...=..|. ..++.-+++++|||.|+-..+-.+...|... | |-|++|..+|.|-|+.....-...
T Consensus 133 GL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~ 212 (469)
T KOG2565|consen 133 GLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNA 212 (469)
T ss_pred ceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccH
Confidence 444444334443 2334567899999999988877777666554 3 899999999999887333333345
Q ss_pred HHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 116 AEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 116 ~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
.+.+..+++.+-.+ +.++..+=|--+|..++..+|..+|
T Consensus 213 ~a~ArvmrkLMlRL-------g~nkffiqGgDwGSiI~snlasLyP 251 (469)
T KOG2565|consen 213 AATARVMRKLMLRL-------GYNKFFIQGGDWGSIIGSNLASLYP 251 (469)
T ss_pred HHHHHHHHHHHHHh-------CcceeEeecCchHHHHHHHHHhhcc
Confidence 55556666666555 7889999999999999999999998
No 179
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.89 E-value=0.017 Score=54.38 Aligned_cols=125 Identities=14% Similarity=-0.011 Sum_probs=70.5
Q ss_pred CCCeeEEEEecCC--CCCccEEEEECCCCCChHHHHHHHH-------------------HHHhCCcEEEEecC-CCCCCC
Q 020199 48 PPPKPLIIVTPAG--KGTFNVILFLHGTSLSNKSYSKIFD-------------------HIASHGFIVVAPQL-YTSIPP 105 (329)
Q Consensus 48 ~~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~~~~~~~~-------------------~la~~G~~Vv~~d~-~g~~~~ 105 (329)
+..+..+ ++++. ..+.|+||++.|+.|++..+..+.+ -+.+. ..++.+|. .|.|.|
T Consensus 23 ~~~lfyw-~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS 100 (415)
T PF00450_consen 23 NAHLFYW-FFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFS 100 (415)
T ss_dssp TEEEEEE-EEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-
T ss_pred CcEEEEE-EEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEe
Confidence 3444433 44543 3568999999999998877543321 12222 67888885 455655
Q ss_pred CCC-cc-ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHh----c------c--ccEEEEeccC
Q 020199 106 PSA-TN-ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLR----Y------G--FGAVIGLDPV 171 (329)
Q Consensus 106 ~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~----~------~--v~~~v~~~p~ 171 (329)
-.. .. ...+..+.++.+..++...+.........++.|.|-|+||..+-.+|.. . + ++++++.+++
T Consensus 101 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~ 180 (415)
T PF00450_consen 101 YGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGW 180 (415)
T ss_dssp EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-
T ss_pred eccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcc
Confidence 311 11 1224455555555555544444455566789999999999887766654 2 1 7888888887
Q ss_pred CCC
Q 020199 172 AGT 174 (329)
Q Consensus 172 ~~~ 174 (329)
...
T Consensus 181 ~dp 183 (415)
T PF00450_consen 181 IDP 183 (415)
T ss_dssp SBH
T ss_pred ccc
Confidence 654
No 180
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.25 E-value=0.013 Score=54.83 Aligned_cols=80 Identities=19% Similarity=0.187 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhCCcEE----EE--ecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHH
Q 020199 79 SYSKIFDHIASHGFIV----VA--PQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQT 152 (329)
Q Consensus 79 ~~~~~~~~la~~G~~V----v~--~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~ 152 (329)
.|..+.+.|.+.||.. .+ +|+|-... ........+...+++.... ...+|.++||||||.+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~ 132 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKK----NGKKVVLIAHSMGGLV 132 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHh----cCCcEEEEEeCCCchH
Confidence 5889999999988754 22 45443211 2223334444444433211 3579999999999999
Q ss_pred HHHHHHhcc--------ccEEEEeccC
Q 020199 153 AFALSLRYG--------FGAVIGLDPV 171 (329)
Q Consensus 153 a~~~a~~~~--------v~~~v~~~p~ 171 (329)
+..+....+ |++.|.+++.
T Consensus 133 ~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 133 ARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 988877653 8888888753
No 181
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.12 E-value=0.12 Score=43.52 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=60.3
Q ss_pred CccEEEEECCCCCCh-HHH---------------HHHHHHHHhCCcEEEEecCCCCCC-CCCCcccc----chHHHHHHH
Q 020199 63 TFNVILFLHGTSLSN-KSY---------------SKIFDHIASHGFIVVAPQLYTSIP-PPSATNEL----NSAAEVAEW 121 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~-~~~---------------~~~~~~la~~G~~Vv~~d~~g~~~-~~~~~~~~----~~~~~~~~~ 121 (329)
+..++|++||.|.-. ..| -++.+.....||-|++.+.-.... ....+.+. ...+.+.-.
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 456999999998522 112 133455556789998887521100 00011111 122222222
Q ss_pred HHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccCC
Q 020199 122 LPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPVA 172 (329)
Q Consensus 122 l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~~ 172 (329)
....+... ....|.++.||+||...+.+..+.+ |-++.+.|...
T Consensus 180 w~~~v~pa-------~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 180 WKNIVLPA-------KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHhccc-------CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 22223222 5678999999999999999999887 77777777553
No 182
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.03 E-value=0.031 Score=53.46 Aligned_cols=100 Identities=18% Similarity=0.236 Sum_probs=64.6
Q ss_pred EEEecCCCCCccEEEEECCCCC---ChHHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhh
Q 020199 54 IIVTPAGKGTFNVILFLHGTSL---SNKSYSKIFDHIAS-HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQN 129 (329)
Q Consensus 54 ~l~~P~~~~~~p~vi~~HG~~~---~~~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 129 (329)
.+|.|..+...-+|+-+||+|- ++.....+.+.+|. .|+.|+.+|+--..... .+......-...-|+.+.-..+
T Consensus 386 ~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP-FPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 386 ELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP-FPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred ccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC-CCcHHHHHHHHHHHHhcCHHHh
Confidence 3454444445668899999986 33333444455544 59999999984433333 4445555666677776654433
Q ss_pred cCCCccCCCcceEEEEeChHHHHHHHHHHh
Q 020199 130 LPENTEANVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 130 ~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
+-..++|++.|-|.||.+.+..+.+
T Consensus 465 -----G~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 465 -----GSTGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred -----CcccceEEEeccCCCcceeehhHHH
Confidence 2245799999999999887776654
No 183
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.93 E-value=0.019 Score=45.28 Aligned_cols=23 Identities=26% Similarity=0.290 Sum_probs=20.1
Q ss_pred CcceEEEEeChHHHHHHHHHHhc
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
..+|.+.|||+||.+|..++...
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhh
Confidence 36899999999999999988764
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.83 E-value=0.084 Score=45.92 Aligned_cols=96 Identities=19% Similarity=0.102 Sum_probs=59.9
Q ss_pred cEEEEECCCCCChHH--HHHHHHHHHhC-CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 65 NVILFLHGTSLSNKS--YSKIFDHIASH-GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 65 p~vi~~HG~~~~~~~--~~~~~~~la~~-G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
-++|+.||.+..... +..+.+.+..+ |..|.+.|.- .|. .........+.++.+.+.+...-+ -.+-+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g~---~~s~l~pl~~Qv~~~ce~v~~m~~-----lsqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DGI---KDSSLMPLWEQVDVACEKVKQMPE-----LSQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CCc---chhhhccHHHHHHHHHHHHhcchh-----ccCce
Confidence 457889999986655 77778878775 8999998863 331 111222233333333333332100 13568
Q ss_pred EEEEeChHHHHHHHHHHhcc---ccEEEEec
Q 020199 142 AVMGHSRGGQTAFALSLRYG---FGAVIGLD 169 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~---v~~~v~~~ 169 (329)
.++|.|.||.++=.++..-+ ++..|.+.
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 99999999999877776533 77777665
No 185
>PLN02209 serine carboxypeptidase
Probab=95.79 E-value=0.18 Score=47.95 Aligned_cols=139 Identities=12% Similarity=0.025 Sum_probs=73.4
Q ss_pred CceeEEEEeecCCCCCCCCCeeEEEEecC--CCCCccEEEEECCCCCChHHHHHHHH-----------------------
Q 020199 31 IYSTKRITLETSSPSSPPPPKPLIIVTPA--GKGTFNVILFLHGTSLSNKSYSKIFD----------------------- 85 (329)
Q Consensus 31 ~~~v~~~~~~~~~~~~~~~~~~~~l~~P~--~~~~~p~vi~~HG~~~~~~~~~~~~~----------------------- 85 (329)
+++.....++..+ ..+..+..+ |.++ ...+.|+|+++.|+.|++..+..+.+
T Consensus 36 ~~~~~sGy~~v~~--~~~~~lf~~-f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~ 112 (437)
T PLN02209 36 PFELETGYIGIGE--EENVQFFYY-FIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTY 112 (437)
T ss_pred CeeEEEEEEEecC--CCCeEEEEE-EEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCC
Confidence 3444455555543 012333333 3343 33457999999999998765432211
Q ss_pred HHHhCCcEEEEecC-CCCCCCCC-Cc-cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHh---
Q 020199 86 HIASHGFIVVAPQL-YTSIPPPS-AT-NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLR--- 159 (329)
Q Consensus 86 ~la~~G~~Vv~~d~-~g~~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~--- 159 (329)
.+.+. ..++-+|. .|.|.|-. .. ....+.. .++.+..++...+.........++.+.|.|+||+.+-.+|..
T Consensus 113 sW~~~-anllfiDqPvGtGfSy~~~~~~~~~~~~-~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 113 SWTKT-ANIIFLDQPVGSGFSYSKTPIERTSDTS-EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred chhhc-CcEEEecCCCCCCccCCCCCCCccCCHH-HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 01112 56666774 34444320 11 1111111 224444444444433334455689999999999876666543
Q ss_pred -c--------cccEEEEeccCCCC
Q 020199 160 -Y--------GFGAVIGLDPVAGT 174 (329)
Q Consensus 160 -~--------~v~~~v~~~p~~~~ 174 (329)
+ ++++++..+++...
T Consensus 191 ~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred hcccccCCceeeeeEEecCcccCh
Confidence 1 17788888876543
No 186
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.67 E-value=0.24 Score=47.14 Aligned_cols=138 Identities=14% Similarity=0.046 Sum_probs=73.2
Q ss_pred ceeEEEEeecCCCCCCCCCeeEEEEecC--CCCCccEEEEECCCCCChHHHHHHHH-----------------------H
Q 020199 32 YSTKRITLETSSPSSPPPPKPLIIVTPA--GKGTFNVILFLHGTSLSNKSYSKIFD-----------------------H 86 (329)
Q Consensus 32 ~~v~~~~~~~~~~~~~~~~~~~~l~~P~--~~~~~p~vi~~HG~~~~~~~~~~~~~-----------------------~ 86 (329)
+......++..+ ..+..+. +.+.++ ...+.|+|+++.|+.|++..+..+.+ .
T Consensus 35 ~~~~sGy~~v~~--~~~~~lf-y~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~s 111 (433)
T PLN03016 35 FELETGYIGIGE--DENVQFF-YYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYS 111 (433)
T ss_pred eeEEEEEEEecC--CCCeEEE-EEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCc
Confidence 454455555542 0122233 333343 34467999999999988764321110 0
Q ss_pred HHhCCcEEEEecC-CCCCCCCC-Cc-cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHh----
Q 020199 87 IASHGFIVVAPQL-YTSIPPPS-AT-NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLR---- 159 (329)
Q Consensus 87 la~~G~~Vv~~d~-~g~~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~---- 159 (329)
+.+. ..++.+|. .|.|.|-. .. ....+...+ +.+..++...+.........++.+.|.|+||+.+-.+|..
T Consensus 112 W~~~-anllfiDqPvGtGfSy~~~~~~~~~d~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~ 189 (433)
T PLN03016 112 WTKM-ANIIFLDQPVGSGFSYSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQG 189 (433)
T ss_pred hhhc-CcEEEecCCCCCCccCCCCCCCccCCHHHH-HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhh
Confidence 1112 56777774 44444421 11 111222222 3344444443333333345679999999999876666553
Q ss_pred c--------cccEEEEeccCCCC
Q 020199 160 Y--------GFGAVIGLDPVAGT 174 (329)
Q Consensus 160 ~--------~v~~~v~~~p~~~~ 174 (329)
+ .++++++-+|+..+
T Consensus 190 n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 190 NYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred cccccCCcccceeeEecCCCcCc
Confidence 1 17888888876544
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.65 E-value=0.037 Score=44.49 Aligned_cols=36 Identities=28% Similarity=0.247 Sum_probs=27.2
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc------ccEEEEeccCC
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG------FGAVIGLDPVA 172 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~------v~~~v~~~p~~ 172 (329)
...+|.++|||+||.+|..++.... ...++.+++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 4568999999999999999887653 44566666543
No 188
>PLN02606 palmitoyl-protein thioesterase
Probab=95.62 E-value=0.12 Score=46.09 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=58.7
Q ss_pred ccEEEEECCCC--CChHHHHHHHHHHHhC-CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 64 FNVILFLHGTS--LSNKSYSKIFDHIASH-GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 64 ~p~vi~~HG~~--~~~~~~~~~~~~la~~-G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
..+||+.||.| .+...+..+.+.+... |.-+..+. .|.+.. ..-...+.+.++.+.+.+.+. + .+. +-
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s~~~~~~~Qv~~vce~l~~~-~---~L~-~G 96 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DSLFMPLRQQASIACEKIKQM-K---ELS-EG 96 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cccccCHHHHHHHHHHHHhcc-h---hhc-Cc
Confidence 34688899999 5555677788877533 65555554 332221 111133444455555444331 1 111 35
Q ss_pred eEEEEeChHHHHHHHHHHhcc----ccEEEEec
Q 020199 141 VAVMGHSRGGQTAFALSLRYG----FGAVIGLD 169 (329)
Q Consensus 141 i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~ 169 (329)
+-++|+|.||...=.++.+-+ |+.+|.++
T Consensus 97 ~naIGfSQGglflRa~ierc~~~p~V~nlISlg 129 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNAPPVINYVSLG 129 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCCCCcceEEEec
Confidence 899999999999888877642 78888776
No 189
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.56 E-value=0.061 Score=45.47 Aligned_cols=99 Identities=19% Similarity=0.171 Sum_probs=60.3
Q ss_pred ccEEEEECCCCCCh---HHHHHHHHHHHhCCcEEEEecCCCC----CCCCCCccccchHHHHHHHHHHHhhhhcCCCccC
Q 020199 64 FNVILFLHGTSLSN---KSYSKIFDHIASHGFIVVAPQLYTS----IPPPSATNELNSAAEVAEWLPQGLQQNLPENTEA 136 (329)
Q Consensus 64 ~p~vi~~HG~~~~~---~~~~~~~~~la~~G~~Vv~~d~~g~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 136 (329)
.-.|||+-|.+..- .....+++.|-+.+|..+-+..+.+ |..+ -..+..++...++ ++.-. .
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s-lk~D~edl~~l~~----Hi~~~-----~- 104 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS-LKDDVEDLKCLLE----HIQLC-----G- 104 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccc-ccccHHHHHHHHH----Hhhcc-----C-
Confidence 35677777776532 2245788899999999999987553 2222 2222223333222 22110 0
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc----ccEEEEeccCCC
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG----FGAVIGLDPVAG 173 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p~~~ 173 (329)
..+.|+++|||-|..-.+.+....- +++.|+..|+..
T Consensus 105 fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 105 FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred cccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 2348999999999988888773322 666677777643
No 190
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.41 E-value=0.051 Score=46.76 Aligned_cols=51 Identities=20% Similarity=0.250 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc------ccEEEEeccCC
Q 020199 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG------FGAVIGLDPVA 172 (329)
Q Consensus 114 ~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~------v~~~v~~~p~~ 172 (329)
....+++++.+.+... ..+|.+.|||.||.+|..++.... |..++.+|+..
T Consensus 67 ~q~~A~~yl~~~~~~~--------~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKY--------PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHHHhC--------CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3445566666654443 235999999999999999888733 77888887543
No 191
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.41 E-value=0.044 Score=48.42 Aligned_cols=100 Identities=20% Similarity=0.193 Sum_probs=50.2
Q ss_pred ccEEEEECCCCCCh---HHHHHHHHHHHhC--CcEEEEecCCCCCCCCCCcc-ccchHHHHHHHHHHHhhhhcCCCccCC
Q 020199 64 FNVILFLHGTSLSN---KSYSKIFDHIASH--GFIVVAPQLYTSIPPPSATN-ELNSAAEVAEWLPQGLQQNLPENTEAN 137 (329)
Q Consensus 64 ~p~vi~~HG~~~~~---~~~~~~~~~la~~--G~~Vv~~d~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~d 137 (329)
..+||+.||+|.+. ..+..+.+.+.+. |--|.+++.-.....+ ... -...+...++.+.+.+... ..+.
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D-~~~s~f~~v~~Qv~~vc~~l~~~----p~L~ 79 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSED-VENSFFGNVNDQVEQVCEQLAND----PELA 79 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHH-HHHHHHSHHHHHHHHHHHHHHH-----GGGT
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchh-hhhhHHHHHHHHHHHHHHHHhhC----hhhh
Confidence 45688899999743 2455555544442 7777777652211111 011 1123444444455444331 1112
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc---ccEEEEec
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLD 169 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~ 169 (329)
+-+.++|+|.||.+.=.++.+.+ |+.+|.++
T Consensus 80 -~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 80 -NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp -T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred -cceeeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 46999999999999888887754 88888876
No 192
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.98 E-value=0.061 Score=50.43 Aligned_cols=75 Identities=12% Similarity=0.102 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhCCcE------EEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHH
Q 020199 78 KSYSKIFDHIASHGFI------VVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQ 151 (329)
Q Consensus 78 ~~~~~~~~~la~~G~~------Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~ 151 (329)
..|..+.+.|+..||. -+.+|+|-+-.. .......+..+...++...... +..+|.+++|||||.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~------~e~rd~yl~kLK~~iE~~~~~~---G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHN------SEERDQYLSKLKKKIETMYKLN---GGKKVVLISHSMGGL 194 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCC------hhHHHHHHHHHHHHHHHHHHHc---CCCceEEEecCCccH
Confidence 3577889999999987 333455432111 1233344444444444332211 447999999999999
Q ss_pred HHHHHHHhcc
Q 020199 152 TAFALSLRYG 161 (329)
Q Consensus 152 ~a~~~a~~~~ 161 (329)
..+.+....+
T Consensus 195 ~~lyFl~w~~ 204 (473)
T KOG2369|consen 195 YVLYFLKWVE 204 (473)
T ss_pred HHHHHHhccc
Confidence 9999887765
No 193
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=94.92 E-value=0.072 Score=50.14 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=66.1
Q ss_pred CCCeeEEEEecC-CCCCccEEEEECCCCC---ChHHHHHHHHHHHhC-CcEEEEecCCCC--------CCCC-CCccccc
Q 020199 48 PPPKPLIIVTPA-GKGTFNVILFLHGTSL---SNKSYSKIFDHIASH-GFIVVAPQLYTS--------IPPP-SATNELN 113 (329)
Q Consensus 48 ~~~~~~~l~~P~-~~~~~p~vi~~HG~~~---~~~~~~~~~~~la~~-G~~Vv~~d~~g~--------~~~~-~~~~~~~ 113 (329)
..=+.+.||.|. ++.+..++|++-|+|- +...-.+=.+.||.. ..+|+.+++|=. +.+. ......-
T Consensus 118 EDCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~ 197 (601)
T KOG4389|consen 118 EDCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLL 197 (601)
T ss_pred hhceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchH
Confidence 345788899994 4455668888888764 222111225667765 466777777321 1222 0223344
Q ss_pred hHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHH
Q 020199 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFA 155 (329)
Q Consensus 114 ~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~ 155 (329)
|..-++.|+.+.+.+. +-|+++|.++|-|.|+..+..
T Consensus 198 DQqLAl~WV~~Ni~aF-----GGnp~~vTLFGESAGaASv~a 234 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAF-----GGNPSRVTLFGESAGAASVVA 234 (601)
T ss_pred HHHHHHHHHHHhHHHh-----CCCcceEEEeccccchhhhhh
Confidence 6777899999988776 338899999999999865443
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=94.45 E-value=0.084 Score=51.22 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCCCCCCcc--ccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHH
Q 020199 79 SYSKIFDHIASHGFIVVAPQLYTSIPPPSATN--ELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFAL 156 (329)
Q Consensus 79 ~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~ 156 (329)
.|..+.+.|++.||. --+.++...-- +.. .......+...+...++...... ...+++++||||||.+++.+
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDW-Rls~~~le~rd~YF~rLK~lIE~ay~~n---ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDW-RLSFQNTEVRDQTLSRLKSNIELMVATN---GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeeccccc-ccCccchhhhhHHHHHHHHHHHHHHHHc---CCCeEEEEEeCCchHHHHHH
Confidence 357899999999997 44444432211 110 11122333344444444332111 35789999999999999986
Q ss_pred HH
Q 020199 157 SL 158 (329)
Q Consensus 157 a~ 158 (329)
..
T Consensus 231 L~ 232 (642)
T PLN02517 231 MK 232 (642)
T ss_pred HH
Confidence 65
No 195
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.34 E-value=0.17 Score=46.81 Aligned_cols=96 Identities=17% Similarity=0.140 Sum_probs=57.3
Q ss_pred cEEEEECCCCCChHHHH---HHHHHHH-hCCcEEEEecCCCCCCCCCC-ccccc--------hHHHHHHHHHHHhhhhcC
Q 020199 65 NVILFLHGTSLSNKSYS---KIFDHIA-SHGFIVVAPQLYTSIPPPSA-TNELN--------SAAEVAEWLPQGLQQNLP 131 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~---~~~~~la-~~G~~Vv~~d~~g~~~~~~~-~~~~~--------~~~~~~~~l~~~~~~~~~ 131 (329)
.+|+|.-|..|+-+.+. -+.-.+| +.+-.+|-++||-.|.+... ..... ..++.+.+....+..+ +
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l-K 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL-K 159 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH-h
Confidence 56888888888776543 2233333 34788999999888777411 11011 1222222222222221 1
Q ss_pred CCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 132 ENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 132 ~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
........+|+++|-|+||++++++=.++|
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcCh
Confidence 111224568999999999999999999998
No 196
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.04 E-value=0.61 Score=41.84 Aligned_cols=96 Identities=17% Similarity=0.110 Sum_probs=57.9
Q ss_pred cEEEEECCCCCChH--HHHHHHHHHHhC-CcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcce
Q 020199 65 NVILFLHGTSLSNK--SYSKIFDHIASH-GFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLV 141 (329)
Q Consensus 65 p~vi~~HG~~~~~~--~~~~~~~~la~~-G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i 141 (329)
.++|+.||.|.+.. ....+.+.+... |.-|.++.. |.+. .......+.+.++.+.+.+.+. + .+. +-+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~---~~s~~~~~~~Qve~vce~l~~~-~---~l~-~G~ 96 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGV---GDSWLMPLTQQAEIACEKVKQM-K---ELS-QGY 96 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCc---cccceeCHHHHHHHHHHHHhhc-h---hhh-CcE
Confidence 46788899997543 455666666553 666666653 3322 1222233444455555544331 1 112 358
Q ss_pred EEEEeChHHHHHHHHHHhcc----ccEEEEec
Q 020199 142 AVMGHSRGGQTAFALSLRYG----FGAVIGLD 169 (329)
Q Consensus 142 ~l~GhS~GG~~a~~~a~~~~----v~~~v~~~ 169 (329)
.++|||.||.++=.++.+-+ ++.+|.++
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 99999999999888777643 88888776
No 197
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=93.97 E-value=0.22 Score=37.16 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=33.3
Q ss_pred CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccc
Q 020199 193 SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDI 245 (329)
Q Consensus 193 ~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~ 245 (329)
..|+|++. ++.|..+| ........+.-.+. .++.+++.||..+
T Consensus 34 ~~piL~l~---~~~Dp~TP------~~~a~~~~~~l~~s-~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLG---GTHDPVTP------YEGARAMAARLPGS-RLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEe---cCcCCCCc------HHHHHHHHHHCCCc-eEEEEeccCccee
Confidence 58999999 77799887 34555565555567 9999999999655
No 198
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.94 E-value=0.098 Score=45.09 Aligned_cols=22 Identities=41% Similarity=0.451 Sum_probs=19.3
Q ss_pred CcceEEEEeChHHHHHHHHHHh
Q 020199 138 VSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
..+|.+.|||+||.+|..++..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4579999999999999988875
No 199
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=93.91 E-value=1.2 Score=36.76 Aligned_cols=107 Identities=19% Similarity=0.108 Sum_probs=55.9
Q ss_pred ccEEEEECCCCCChHH--------HHHHHHHH------HhCCcEEEEecCCCCCCCC-CC--ccccchHHHHHHHHHHHh
Q 020199 64 FNVILFLHGTSLSNKS--------YSKIFDHI------ASHGFIVVAPQLYTSIPPP-SA--TNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~--------~~~~~~~l------a~~G~~Vv~~d~~g~~~~~-~~--~~~~~~~~~~~~~l~~~~ 126 (329)
.-+.++++|.+.+... ...+.+.+ +..+=.|.++-+.|+..+. .. .......+.....|..++
T Consensus 19 ~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~ 98 (177)
T PF06259_consen 19 DHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFL 98 (177)
T ss_pred CeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHH
Confidence 3477888887754321 11122211 1223355555555654441 01 111222333344444444
Q ss_pred hhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEec-cCC
Q 020199 127 QQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLD-PVA 172 (329)
Q Consensus 127 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~-p~~ 172 (329)
+.+-... ....++.++|||+|+.++-.++.... +..++++. |..
T Consensus 99 ~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 99 DGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHhhhhc--CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3332111 13468999999999999998887733 77777665 443
No 200
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.29 E-value=0.15 Score=46.98 Aligned_cols=85 Identities=14% Similarity=0.241 Sum_probs=45.5
Q ss_pred CCccEEEEECCCCC-ChHHHHHHHHHHHhC--CcEEEEecCCCCCCCCCC-ccccc-hHHHHHHHHHHHhhhhcCCCccC
Q 020199 62 GTFNVILFLHGTSL-SNKSYSKIFDHIASH--GFIVVAPQLYTSIPPPSA-TNELN-SAAEVAEWLPQGLQQNLPENTEA 136 (329)
Q Consensus 62 ~~~p~vi~~HG~~~-~~~~~~~~~~~la~~--G~~Vv~~d~~g~~~~~~~-~~~~~-~~~~~~~~l~~~~~~~~~~~~~~ 136 (329)
++.-++++.||..+ +...|...+...... ++.++ ++|....... ...+. -.....+++.+.+...
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv---~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~------- 147 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIV---VRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY------- 147 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEe---eeccccchhhccccceeeecccHHHHhhhhhcc-------
Confidence 34568999999999 455555556655554 44333 3443222100 00111 1122333333322222
Q ss_pred CCcceEEEEeChHHHHHHHH
Q 020199 137 NVSLVAVMGHSRGGQTAFAL 156 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~ 156 (329)
..++|-++|||.||.++-.+
T Consensus 148 si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 148 SIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccceeeeeeeecCCeeeeEE
Confidence 24799999999999886554
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.91 E-value=0.83 Score=37.85 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=26.7
Q ss_pred CcceEEEEeChHHHHHHHHHHh--cc------ccEEEEec
Q 020199 138 VSLVAVMGHSRGGQTAFALSLR--YG------FGAVIGLD 169 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~--~~------v~~~v~~~ 169 (329)
..+|+++|+|.|+.++..++.. .+ |.+++++.
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 4689999999999999999877 22 88887775
No 202
>PLN02454 triacylglycerol lipase
Probab=92.89 E-value=0.18 Score=47.12 Aligned_cols=20 Identities=25% Similarity=0.360 Sum_probs=18.2
Q ss_pred ceEEEEeChHHHHHHHHHHh
Q 020199 140 LVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~ 159 (329)
+|.+.|||+||.+|+.+|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 59999999999999999865
No 203
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=92.41 E-value=0.27 Score=33.13 Aligned_cols=48 Identities=17% Similarity=0.184 Sum_probs=25.8
Q ss_pred CCCceeEEEEeecCCCCCCCCCeeEEEEecC-----CCCCccEEEEECCCCCChHHH
Q 020199 29 RGIYSTKRITLETSSPSSPPPPKPLIIVTPA-----GKGTFNVILFLHGTSLSNKSY 80 (329)
Q Consensus 29 ~~~~~v~~~~~~~~~~~~~~~~~~~~l~~P~-----~~~~~p~vi~~HG~~~~~~~~ 80 (329)
.--|.++.-.++..| |--+.++-..+. ...++|+|++.||+.+++..|
T Consensus 7 ~~GY~~E~h~V~T~D----GYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 7 KHGYPCEEHEVTTED----GYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp HTT---EEEEEE-TT----SEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred HcCCCcEEEEEEeCC----CcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 345777777788875 666666555333 234689999999999998876
No 204
>PLN02571 triacylglycerol lipase
Probab=92.40 E-value=0.2 Score=46.77 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=18.3
Q ss_pred ceEEEEeChHHHHHHHHHHh
Q 020199 140 LVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~ 159 (329)
+|.+.|||+||.+|...|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 69999999999999998875
No 205
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=92.23 E-value=1.3 Score=42.00 Aligned_cols=112 Identities=11% Similarity=0.016 Sum_probs=70.4
Q ss_pred EEEecCC--CCCccEEEEECCCCCChHHH-----HHHHHHHHhCCcEEEEecCCCCCCCCCCcc-------ccchHHHHH
Q 020199 54 IIVTPAG--KGTFNVILFLHGTSLSNKSY-----SKIFDHIASHGFIVVAPQLYTSIPPPSATN-------ELNSAAEVA 119 (329)
Q Consensus 54 ~l~~P~~--~~~~p~vi~~HG~~~~~~~~-----~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~-------~~~~~~~~~ 119 (329)
+.|.+.. ....|+.+++-|=|.....| ..+....++.|-.|+..+||-.|.+. ... ..-+..+++
T Consensus 74 ~~y~n~~~~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~-P~~~~st~nlk~LSs~QAL 152 (514)
T KOG2182|consen 74 RFYNNNQWAKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSS-PIGDLSTSNLKYLSSLQAL 152 (514)
T ss_pred heeeccccccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCC-CCCCCcccchhhhhHHHHH
Confidence 4444442 23467778887766544333 13344455679999999998888654 111 112445666
Q ss_pred HHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEE
Q 020199 120 EWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVI 166 (329)
Q Consensus 120 ~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v 166 (329)
.++..+++++......-+..+-+.+|-|+-|.+++++=..+| +.+.|
T Consensus 153 aDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~Gsv 201 (514)
T KOG2182|consen 153 ADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSV 201 (514)
T ss_pred HHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeec
Confidence 666666655433222224458999999999999999989998 44444
No 206
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=92.13 E-value=1 Score=38.96 Aligned_cols=166 Identities=17% Similarity=0.066 Sum_probs=87.4
Q ss_pred EEEECCCCCChHH-HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEE
Q 020199 67 ILFLHGTSLSNKS-YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMG 145 (329)
Q Consensus 67 vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~G 145 (329)
+|++=||.+.... ...+.+...+.|+.++.+-.+...... .. ..+...++.+.+.+.+... -+..+|.+=.
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~-~~---~~~~~~~~~l~~~l~~~~~----~~~~~il~H~ 73 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW-PS---KRLAPAADKLLELLSDSQS----ASPPPILFHS 73 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee-ec---cchHHHHHHHHHHhhhhcc----CCCCCEEEEE
Confidence 4455577665543 445566566699999998654432221 11 3444445555444433211 1224899999
Q ss_pred eChHHHHHHHHHHh-----c------c-ccEEEEeccCCCCCCC-------CCCCCc----cc---c-------------
Q 020199 146 HSRGGQTAFALSLR-----Y------G-FGAVIGLDPVAGTSKT-------TGLDPS----IL---S------------- 186 (329)
Q Consensus 146 hS~GG~~a~~~a~~-----~------~-v~~~v~~~p~~~~~~~-------~~~~~~----~~---~------------- 186 (329)
+|.||...+..... . + ++++|.-+........ ...+.. .. .
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISY 153 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99988776665441 1 1 6776644422111100 000111 00 0
Q ss_pred ----c-----------Ccc---CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCccccc
Q 020199 187 ----F-----------DSF---DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDIL 246 (329)
Q Consensus 187 ----~-----------~~~---~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~ 246 (329)
. +.+ ...+|-|.+. .+.|.+++....+. +.+..++.... .....+++..|..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylY---S~~D~l~~~~~ve~--~~~~~~~~G~~-V~~~~f~~S~HV~H~ 225 (240)
T PF05705_consen 154 FIFGYPDVQEYYRRALNDFANSPSRCPRLYLY---SKADPLIPWRDVEE--HAEEARRKGWD-VRAEKFEDSPHVAHL 225 (240)
T ss_pred HHhcCCcHHHHHHHHHhhhhcCCCCCCeEEec---CCCCcCcCHHHHHH--HHHHHHHcCCe-EEEecCCCCchhhhc
Confidence 0 112 5568999999 66699877543322 23333333333 377888899997664
No 207
>PLN02162 triacylglycerol lipase
Probab=92.12 E-value=0.25 Score=46.65 Aligned_cols=21 Identities=29% Similarity=0.276 Sum_probs=18.4
Q ss_pred CcceEEEEeChHHHHHHHHHH
Q 020199 138 VSLVAVMGHSRGGQTAFALSL 158 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~ 158 (329)
..++.+.|||+||.+|..++.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CceEEEEecChHHHHHHHHHH
Confidence 458999999999999998765
No 208
>PLN00413 triacylglycerol lipase
Probab=92.02 E-value=0.27 Score=46.56 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=19.4
Q ss_pred CCcceEEEEeChHHHHHHHHHHh
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
...+|.+.|||+||.+|..++..
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHH
Confidence 34589999999999999998753
No 209
>PLN02408 phospholipase A1
Probab=91.52 E-value=0.31 Score=44.93 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=18.8
Q ss_pred ceEEEEeChHHHHHHHHHHhc
Q 020199 140 LVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~~ 160 (329)
+|.+.|||+||.+|..+|...
T Consensus 201 sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 699999999999999988764
No 210
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=90.93 E-value=3.4 Score=39.40 Aligned_cols=138 Identities=12% Similarity=0.005 Sum_probs=71.3
Q ss_pred eeEEEEeecCCCCCCCCCeeEEEEecC-CCCCccEEEEECCCCCChHHHHHHHHHHH-----hCC-------------cE
Q 020199 33 STKRITLETSSPSSPPPPKPLIIVTPA-GKGTFNVILFLHGTSLSNKSYSKIFDHIA-----SHG-------------FI 93 (329)
Q Consensus 33 ~v~~~~~~~~~~~~~~~~~~~~l~~P~-~~~~~p~vi~~HG~~~~~~~~~~~~~~la-----~~G-------------~~ 93 (329)
+-....++... ..++.+..+.+--. .+...|+||++.|+.|++..- -+..++- ..| -.
T Consensus 43 ~~ysGYv~v~~--~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aN 119 (454)
T KOG1282|consen 43 KQYSGYVTVNE--SEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEAN 119 (454)
T ss_pred ccccceEECCC--CCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCcccccccc
Confidence 33333455442 12555555544322 345579999999999987643 3322221 111 23
Q ss_pred EEEecCC-CC--CCCCCCcccc-chHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc---------
Q 020199 94 VVAPQLY-TS--IPPPSATNEL-NSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY--------- 160 (329)
Q Consensus 94 Vv~~d~~-g~--~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~--------- 160 (329)
++-+|.| |- +.+. ..... ..-...+++...++.+.+..........+.+.|-|++|+.+-.+|..-
T Consensus 120 iLfLd~PvGvGFSYs~-~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~ 198 (454)
T KOG1282|consen 120 ILFLDQPVGVGFSYSN-TSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCK 198 (454)
T ss_pred EEEEecCCcCCccccC-CCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccC
Confidence 4444442 22 2222 11111 122222333333333333333444567899999999997777766542
Q ss_pred c---ccEEEEeccCCCC
Q 020199 161 G---FGAVIGLDPVAGT 174 (329)
Q Consensus 161 ~---v~~~v~~~p~~~~ 174 (329)
+ +|+++.-+|....
T Consensus 199 ~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 199 PNINLKGYAIGNGLTDP 215 (454)
T ss_pred CcccceEEEecCcccCc
Confidence 1 7788777776654
No 211
>PLN02934 triacylglycerol lipase
Probab=90.88 E-value=0.38 Score=45.99 Aligned_cols=22 Identities=32% Similarity=0.386 Sum_probs=19.0
Q ss_pred CcceEEEEeChHHHHHHHHHHh
Q 020199 138 VSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
..+|.+.|||+||.+|..++..
T Consensus 320 ~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 320 NAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CCeEEEeccccHHHHHHHHHHH
Confidence 4589999999999999998753
No 212
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.16 E-value=2.4 Score=40.91 Aligned_cols=122 Identities=13% Similarity=0.191 Sum_probs=70.1
Q ss_pred CCCeeEEEEecCCCCCccEEEEECCCCCChH-HHHH----HHHHHHhCCcEEEEecCCCCCCCCC---CccccchHHHHH
Q 020199 48 PPPKPLIIVTPAGKGTFNVILFLHGTSLSNK-SYSK----IFDHIASHGFIVVAPQLYTSIPPPS---ATNELNSAAEVA 119 (329)
Q Consensus 48 ~~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~-~~~~----~~~~la~~G~~Vv~~d~~g~~~~~~---~~~~~~~~~~~~ 119 (329)
...|.+.|+.|. .-+.. ++..-|.|.+.. .+.. +. .-.++||+++.-|. |+..... .... .+.+...
T Consensus 14 ~~~i~fev~LP~-~WNgR-~~~~GgGG~~G~i~~~~~~~~~~-~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~-~n~~~~~ 88 (474)
T PF07519_consen 14 APNIRFEVWLPD-NWNGR-FLQVGGGGFAGGINYADGKASMA-TALARGYATASTDS-GHQGSAGSDDASFG-NNPEALL 88 (474)
T ss_pred cceEEEEEECCh-hhccC-eEEECCCeeeCcccccccccccc-hhhhcCeEEEEecC-CCCCCccccccccc-CCHHHHH
Confidence 347899999998 43332 333333322221 1212 23 33468999999995 3222210 1111 3333333
Q ss_pred HHHHH-------HhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCCCC
Q 020199 120 EWLPQ-------GLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVAGT 174 (329)
Q Consensus 120 ~~l~~-------~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~~~ 174 (329)
+|-.+ .-+++++...+-..++-+..|-|-||.-++..|.++| +.+|+.-.|..+.
T Consensus 89 dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 89 DFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 33221 1112222223335677899999999999999999999 9999988886543
No 213
>PLN02310 triacylglycerol lipase
Probab=90.04 E-value=0.54 Score=43.88 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=18.6
Q ss_pred cceEEEEeChHHHHHHHHHHh
Q 020199 139 SLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~ 159 (329)
.+|.+.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999998864
No 214
>PLN02324 triacylglycerol lipase
Probab=89.87 E-value=0.51 Score=44.13 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=18.3
Q ss_pred ceEEEEeChHHHHHHHHHHh
Q 020199 140 LVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~ 159 (329)
+|.+.|||+||.+|+.+|..
T Consensus 216 sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 79999999999999998865
No 215
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=89.36 E-value=3.4 Score=37.19 Aligned_cols=125 Identities=13% Similarity=0.089 Sum_probs=79.1
Q ss_pred CCCeeEEEEecCC--CCCccEEEEECCCCCChHH----HHHH-----------HHHHHhCCcEEEEecC-CCCCCC--CC
Q 020199 48 PPPKPLIIVTPAG--KGTFNVILFLHGTSLSNKS----YSKI-----------FDHIASHGFIVVAPQL-YTSIPP--PS 107 (329)
Q Consensus 48 ~~~~~~~l~~P~~--~~~~p~vi~~HG~~~~~~~----~~~~-----------~~~la~~G~~Vv~~d~-~g~~~~--~~ 107 (329)
+.....++|+-.. ....|+.+.+.|..|.+.. |.++ ...| +. ..++.+|. -|.|.+ ++
T Consensus 13 ~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k~-adllfvDnPVGaGfSyVdg 90 (414)
T KOG1283|consen 13 GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-KD-ADLLFVDNPVGAGFSYVDG 90 (414)
T ss_pred CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-hh-ccEEEecCCCcCceeeecC
Confidence 4456667776653 2457999999998774432 2222 1112 11 45666676 333333 21
Q ss_pred CccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc-----------ccEEEEeccCCCC
Q 020199 108 ATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-----------FGAVIGLDPVAGT 174 (329)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~-----------v~~~v~~~p~~~~ 174 (329)
...-..+..+...++...++.++.....+...++.++--|+||-++..++.... +.++++-|++..+
T Consensus 91 ~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 91 SSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred cccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 222233455566666666666666666677889999999999999999887653 6677888888765
No 216
>PLN02802 triacylglycerol lipase
Probab=88.79 E-value=0.69 Score=44.25 Aligned_cols=21 Identities=29% Similarity=0.400 Sum_probs=18.7
Q ss_pred ceEEEEeChHHHHHHHHHHhc
Q 020199 140 LVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~~ 160 (329)
+|.+.|||+||.+|..+|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 331 SITVTGHSLGAALALLVADEL 351 (509)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 799999999999999988753
No 217
>PLN02753 triacylglycerol lipase
Probab=88.67 E-value=0.68 Score=44.46 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=18.8
Q ss_pred cceEEEEeChHHHHHHHHHHh
Q 020199 139 SLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~ 159 (329)
-+|.+.|||+||.+|...|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 479999999999999998864
No 218
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=88.58 E-value=1.9 Score=36.68 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=50.6
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEE-EecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceE
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVV-APQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVA 142 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv-~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~ 142 (329)
..+|||+.|||.+...+..+. ...+|.|+ +.|++.-... .+ +. ..++|.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~d-------------~~-----~~---------~y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDFD-------------FD-----LS---------GYREIY 60 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCcccccc-------------cc-----cc---------cCceEE
Confidence 369999999999987765442 12345444 4555542110 00 11 347899
Q ss_pred EEEeChHHHHHHHHHHhccccEEEEecc
Q 020199 143 VMGHSRGGQTAFALSLRYGFGAVIGLDP 170 (329)
Q Consensus 143 l~GhS~GG~~a~~~a~~~~v~~~v~~~p 170 (329)
++++|||=.+|..+....+++..++++.
T Consensus 61 lvAWSmGVw~A~~~l~~~~~~~aiAING 88 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIPFKRAIAING 88 (213)
T ss_pred EEEEeHHHHHHHHHhccCCcceeEEEEC
Confidence 9999999999888766667776676663
No 219
>PLN02719 triacylglycerol lipase
Probab=88.49 E-value=0.71 Score=44.22 Aligned_cols=21 Identities=33% Similarity=0.423 Sum_probs=18.7
Q ss_pred cceEEEEeChHHHHHHHHHHh
Q 020199 139 SLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~ 159 (329)
-+|.+.|||+||.+|..+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999998864
No 220
>PLN03037 lipase class 3 family protein; Provisional
Probab=88.44 E-value=0.81 Score=43.93 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=18.6
Q ss_pred cceEEEEeChHHHHHHHHHHh
Q 020199 139 SLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~ 159 (329)
-+|.+.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999998865
No 221
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=87.80 E-value=1.1 Score=37.97 Aligned_cols=24 Identities=25% Similarity=0.253 Sum_probs=20.6
Q ss_pred CCcceEEEEeChHHHHHHHHHHhc
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
+..+++|+|||.|+.+...+..+.
T Consensus 93 ~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 93 NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCCCEEEEEeChHHHHHHHHHHHH
Confidence 345899999999999999998765
No 222
>PLN02761 lipase class 3 family protein
Probab=87.14 E-value=0.77 Score=44.07 Aligned_cols=21 Identities=29% Similarity=0.388 Sum_probs=18.6
Q ss_pred cceEEEEeChHHHHHHHHHHh
Q 020199 139 SLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~ 159 (329)
.+|.+.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 379999999999999998864
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=86.74 E-value=1.4 Score=41.97 Aligned_cols=103 Identities=10% Similarity=-0.020 Sum_probs=58.1
Q ss_pred eeEEEEec-CCCCCccEEEEECCCCCChHHHHHHHHH-------------------HHhCCcEEEEec-CCCCCCCCC-C
Q 020199 51 KPLIIVTP-AGKGTFNVILFLHGTSLSNKSYSKIFDH-------------------IASHGFIVVAPQ-LYTSIPPPS-A 108 (329)
Q Consensus 51 ~~~~l~~P-~~~~~~p~vi~~HG~~~~~~~~~~~~~~-------------------la~~G~~Vv~~d-~~g~~~~~~-~ 108 (329)
..++.+-+ ....+.|+++++.|+.|++..+-.+.+. +.++ -.++-+| ..|-|.|.. .
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~ 165 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALG 165 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccc
Confidence 34444444 3456789999999999998876554220 1112 2455566 334444431 1
Q ss_pred ccc-------cchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHh
Q 020199 109 TNE-------LNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 109 ~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
... -.|+..+.+.+.+.+.+... ..++..++|-|+||+-+..+|..
T Consensus 166 ~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r-----~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 166 DEKKKDFEGAGKDVYSFLRLFFDKFPHYAR-----LLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHhh-----hcCceeEeeccccchhhHHHHHH
Confidence 111 12333344444443333311 23589999999999988887765
No 224
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.63 E-value=1.4 Score=38.89 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=27.9
Q ss_pred CcceEEEEeChHHHHHHHHHHhccccEEEEeccCC
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVA 172 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~ 172 (329)
..+|.+.|||+||.+|..+...+.+-.+..-+|..
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fglP~VaFesPGd 309 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRFGLPVVAFESPGD 309 (425)
T ss_pred CceEEEeccccchHHHHHhccccCCceEEecCchh
Confidence 36899999999999999998887766666555654
No 225
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.63 E-value=1.4 Score=38.89 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=27.9
Q ss_pred CcceEEEEeChHHHHHHHHHHhccccEEEEeccCC
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVA 172 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~ 172 (329)
..+|.+.|||+||.+|..+...+.+-.+..-+|..
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fglP~VaFesPGd 309 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRFGLPVVAFESPGD 309 (425)
T ss_pred CceEEEeccccchHHHHHhccccCCceEEecCchh
Confidence 36899999999999999998887766666555654
No 226
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=86.44 E-value=3.7 Score=35.39 Aligned_cols=65 Identities=26% Similarity=0.234 Sum_probs=40.0
Q ss_pred CcEEEEecCCCCCCCC---CCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc
Q 020199 91 GFIVVAPQLYTSIPPP---SATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 91 G~~Vv~~d~~g~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
||.+..++++..-.+. ....-..+..+-.+.+.+.+.+... ..+++.++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHH
Confidence 6778888886642221 0111223445555556555554322 446899999999999998877654
No 227
>PLN02847 triacylglycerol lipase
Probab=85.84 E-value=1.3 Score=43.27 Aligned_cols=21 Identities=38% Similarity=0.506 Sum_probs=18.3
Q ss_pred cceEEEEeChHHHHHHHHHHh
Q 020199 139 SLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 139 ~~i~l~GhS~GG~~a~~~a~~ 159 (329)
-+|.++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 479999999999999988764
No 228
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=85.20 E-value=1.3 Score=40.58 Aligned_cols=23 Identities=35% Similarity=0.326 Sum_probs=19.9
Q ss_pred CcceEEEEeChHHHHHHHHHHhc
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
.-+|.+.|||+||.+|..+|..-
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHH
Confidence 35799999999999999988764
No 229
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=85.19 E-value=3.2 Score=37.74 Aligned_cols=81 Identities=19% Similarity=0.075 Sum_probs=48.2
Q ss_pred EEEEecCC-CCCCCCC-Cc-cccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhc---------
Q 020199 93 IVVAPQLY-TSIPPPS-AT-NELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRY--------- 160 (329)
Q Consensus 93 ~Vv~~d~~-g~~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~--------- 160 (329)
.++-+|.| |.|.|-. .. ....+..++ +.+..++...+.........++.+.|-|+||+.+-.+|..-
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 57888886 4444421 11 112222222 44444454444434445667899999999998777766531
Q ss_pred ---cccEEEEeccCCCC
Q 020199 161 ---GFGAVIGLDPVAGT 174 (329)
Q Consensus 161 ---~v~~~v~~~p~~~~ 174 (329)
.+++++.-+|+..+
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 17788888877654
No 230
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=85.02 E-value=26 Score=31.33 Aligned_cols=84 Identities=7% Similarity=-0.042 Sum_probs=51.0
Q ss_pred CCCccEEEEECCCCCCh-HHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCc
Q 020199 61 KGTFNVILFLHGTSLSN-KSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVS 139 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~-~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~ 139 (329)
....|.|+++--..|.. ...+...+.|-.. ..|+..|+-...... -.....++.++++++.+.+..+ ..
T Consensus 100 r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp-~~~G~FdldDYIdyvie~~~~~-------Gp- 169 (415)
T COG4553 100 RKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVP-LEAGHFDLDDYIDYVIEMINFL-------GP- 169 (415)
T ss_pred cCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceee-cccCCccHHHHHHHHHHHHHHh-------CC-
Confidence 34456777776666644 4456667777665 577887875433322 2233457788888888877665 32
Q ss_pred ceEEEEeChHHHHHH
Q 020199 140 LVAVMGHSRGGQTAF 154 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~ 154 (329)
++.+++.|.=+.-.+
T Consensus 170 ~~hv~aVCQP~vPvL 184 (415)
T COG4553 170 DAHVMAVCQPTVPVL 184 (415)
T ss_pred CCcEEEEecCCchHH
Confidence 366667776654433
No 231
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=83.22 E-value=2.7 Score=38.56 Aligned_cols=98 Identities=11% Similarity=0.225 Sum_probs=60.5
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc-ccEEEEecc---------------CCCC-----------CCCCCCCCccc----
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG-FGAVIGLDP---------------VAGT-----------SKTTGLDPSIL---- 185 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~-v~~~v~~~p---------------~~~~-----------~~~~~~~~~~~---- 185 (329)
......+.|-|--|..+...|..+| +.+++-+.. ..+. .....+....+
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~ 311 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLL 311 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHH
Confidence 6778999999999999999999888 444432110 0000 00000000000
Q ss_pred ------cc-Cc---cCCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcc
Q 020199 186 ------SF-DS---FDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHM 243 (329)
Q Consensus 186 ------~~-~~---~~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~ 243 (329)
.+ +. .++.+|-.++. +..|+.++|.+.. -+++.+.+.+ .+.++|+..|.
T Consensus 312 ~IiDPlay~~try~~RLalpKyivn---aSgDdff~pDsa~-----lYyd~LPG~k-aLrmvPN~~H~ 370 (507)
T COG4287 312 EIIDPLAYRNTRYQLRLALPKYIVN---ASGDDFFVPDSAN-----LYYDDLPGEK-ALRMVPNDPHN 370 (507)
T ss_pred HhhcHHHHhhhhhhhhccccceeec---ccCCcccCCCccc-----eeeccCCCce-eeeeCCCCcch
Confidence 01 11 17889999999 5558877765332 2356777666 99999999994
No 232
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.65 E-value=2.3 Score=37.23 Aligned_cols=110 Identities=11% Similarity=-0.003 Sum_probs=62.5
Q ss_pred CCeeEEEEecCCCCCccEEEEECCCCCChHHHH-HHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHH----
Q 020199 49 PPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYS-KIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLP---- 123 (329)
Q Consensus 49 ~~~~~~l~~P~~~~~~p~vi~~HG~~~~~~~~~-~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~---- 123 (329)
+.-.+..+.|.. ..|+-++.-|.|.....-+ -+..-+..+|...++++-+-+|... .+......-+...++.
T Consensus 100 ~~A~~~~liPQK--~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~-p~~q~~~~Le~vtDlf~mG~ 176 (371)
T KOG1551|consen 100 RTARVAWLIPQK--MADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRV-PEEQIIHMLEYVTDLFKMGR 176 (371)
T ss_pred cceeeeeecccC--cCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccC-CHHHHHHHHHHHHHHHHhhH
Confidence 445556666743 3467777777666443212 3455677788888888876665543 2222222111112211
Q ss_pred ---HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 124 ---QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 124 ---~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
+....++.-.......+.+++|-||||.+|-.+...++
T Consensus 177 A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q 217 (371)
T KOG1551|consen 177 ATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQ 217 (371)
T ss_pred HHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCC
Confidence 11112222122235678999999999999999888554
No 233
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=79.97 E-value=15 Score=35.14 Aligned_cols=113 Identities=10% Similarity=0.020 Sum_probs=65.8
Q ss_pred EEEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEe-cCCCCCCCCCCccccchHHHHHHHHHHHhhhhcC
Q 020199 53 LIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAP-QLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLP 131 (329)
Q Consensus 53 ~~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~-d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 131 (329)
.+.+.|-+ -+-|+.|++.|+-... .+..+ -.+.+.|...+.+ |.|-.|..= --.....-....+.+.+.++.+
T Consensus 279 ~yYFnPGD-~KPPL~VYFSGyR~aE-GFEgy-~MMk~Lg~PfLL~~DpRleGGaF-YlGs~eyE~~I~~~I~~~L~~L-- 352 (511)
T TIGR03712 279 IYYFNPGD-FKPPLNVYFSGYRPAE-GFEGY-FMMKRLGAPFLLIGDPRLEGGAF-YLGSDEYEQGIINVIQEKLDYL-- 352 (511)
T ss_pred EEecCCcC-CCCCeEEeeccCcccC-cchhH-HHHHhcCCCeEEeecccccccee-eeCcHHHHHHHHHHHHHHHHHh--
Confidence 34455543 3568999999987632 23211 1233446655554 333332220 0001111223344444445444
Q ss_pred CCccCCCcceEEEEeChHHHHHHHHHHhccccEEEEeccCCCC
Q 020199 132 ENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGT 174 (329)
Q Consensus 132 ~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~v~~~v~~~p~~~~ 174 (329)
+++.+.+.+.|-|||...|+.+++...-.|+|.--|..+.
T Consensus 353 ---gF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 353 ---GFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPLVNL 392 (511)
T ss_pred ---CCCHHHeeeccccccchhhhhhcccCCCceEEEcCcccch
Confidence 5577889999999999999999988766787777776554
No 234
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=78.16 E-value=12 Score=39.84 Aligned_cols=94 Identities=16% Similarity=0.181 Sum_probs=62.6
Q ss_pred CCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 61 KGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
..+.|.++|+|-..|....+..++..| -+..+.... . ..-..++++....+..+.+++.-+ ..+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rl---e~PaYglQ~------T-~~vP~dSies~A~~yirqirkvQP------~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRL---EIPAYGLQC------T-EAVPLDSIESLAAYYIRQIRKVQP------EGP 2183 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhc---CCcchhhhc------c-ccCCcchHHHHHHHHHHHHHhcCC------CCC
Confidence 345799999999999887777666554 233332221 1 233456777777777776766522 246
Q ss_pred eEEEEeChHHHHHHHHHHhcc----ccEEEEecc
Q 020199 141 VAVMGHSRGGQTAFALSLRYG----FGAVIGLDP 170 (329)
Q Consensus 141 i~l~GhS~GG~~a~~~a~~~~----v~~~v~~~p 170 (329)
.-++|+|+|+.++..+|.... ...+|++|.
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 789999999999999887643 445666664
No 235
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=76.95 E-value=4 Score=34.15 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=32.2
Q ss_pred CCCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccCCC
Q 020199 191 DFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDN 249 (329)
Q Consensus 191 ~i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d~~ 249 (329)
.+++|+++++ |+.|.+.|.. ....+.........+++++++||+.+.+..
T Consensus 219 ~~~~P~l~i~---g~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 268 (282)
T COG0596 219 RITVPTLIIH---GEDDPVVPAE------LARRLAAALPNDARLVVIPGAGHFPHLEAP 268 (282)
T ss_pred cCCCCeEEEe---cCCCCcCCHH------HHHHHHhhCCCCceEEEeCCCCCcchhhcH
Confidence 7789999999 7778544421 122233333322389999999998776544
No 236
>PF03283 PAE: Pectinacetylesterase
Probab=74.71 E-value=25 Score=32.65 Aligned_cols=23 Identities=30% Similarity=0.274 Sum_probs=19.7
Q ss_pred CCcceEEEEeChHHHHHHHHHHh
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
+.++|.+.|-|.||..++..+..
T Consensus 154 ~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 154 NAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred ccceEEEeccChHHHHHHHHHHH
Confidence 46789999999999999887654
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.08 E-value=19 Score=35.38 Aligned_cols=22 Identities=36% Similarity=0.424 Sum_probs=17.3
Q ss_pred CCcceEEEEeChHHHHHHHHHH
Q 020199 137 NVSLVAVMGHSRGGQTAFALSL 158 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~ 158 (329)
|...|.-+||||||..+=.+..
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred CCCceEEEecccchHHHHHHHH
Confidence 4568999999999987766544
No 238
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=65.95 E-value=4.8 Score=33.65 Aligned_cols=50 Identities=8% Similarity=0.192 Sum_probs=31.6
Q ss_pred CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCCCeeEEEeccCCcccccC
Q 020199 193 SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILD 247 (329)
Q Consensus 193 ~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~gH~~~~d 247 (329)
++++|-|- |+.|+|..+..... ..+.-..+....|..++.+++||++.+.
T Consensus 134 ~taLlTVE---Ge~DDIsg~GQT~A--A~~LC~glp~~~k~~~~~~g~GHYGlF~ 183 (202)
T PF06850_consen 134 RTALLTVE---GERDDISGPGQTHA--AHDLCTGLPADMKRHHLQPGVGHYGLFN 183 (202)
T ss_pred cceeEEee---cCcccCCcchHHHH--HHHHhcCCCHHHhhhcccCCCCeeeccc
Confidence 46777799 88899966442221 1122233344556788999999986643
No 239
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=61.20 E-value=11 Score=28.56 Aligned_cols=23 Identities=26% Similarity=0.218 Sum_probs=12.2
Q ss_pred CCCCccEEEEECCCCCChHHHHH
Q 020199 60 GKGTFNVILFLHGTSLSNKSYSK 82 (329)
Q Consensus 60 ~~~~~p~vi~~HG~~~~~~~~~~ 82 (329)
...+..+|||+||+.|+--.|..
T Consensus 88 ~~~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp S-TT-EEEEEE--SS--GGGGHH
T ss_pred CCCCCeEEEEECCCCccHHhHHh
Confidence 34456789999999998765543
No 240
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=61.15 E-value=58 Score=28.95 Aligned_cols=24 Identities=29% Similarity=0.265 Sum_probs=20.1
Q ss_pred CCcceEEEEeChHHHHHHHHHHhc
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
..++|.++|+|-|+.+|=.++..-
T Consensus 90 ~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 90 PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred CcceEEEEecCccHHHHHHHHHHH
Confidence 346799999999999998888663
No 241
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=57.64 E-value=36 Score=32.71 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=46.6
Q ss_pred EEECCCCCChHHHHHHHHHHH-hCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEe
Q 020199 68 LFLHGTSLSNKSYSKIFDHIA-SHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGH 146 (329)
Q Consensus 68 i~~HG~~~~~~~~~~~~~~la-~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~Gh 146 (329)
+|--|+|.+......-|-..| ..||.|+.+|..|.-... ..- ..-+..++... .++.|..+|-
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~-----~~l----m~~l~k~~~~~-------~pd~i~~vge 505 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN-----APL----MTSLAKLIKVN-------KPDLILFVGE 505 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC-----hhH----HHHHHHHHhcC-------CCceEEEehh
Confidence 566677777665554444444 469999999998753322 112 22233333332 5678999998
Q ss_pred ChHHHHHHHHHHh
Q 020199 147 SRGGQTAFALSLR 159 (329)
Q Consensus 147 S~GG~~a~~~a~~ 159 (329)
-+=|.=++.-+..
T Consensus 506 alvg~dsv~q~~~ 518 (587)
T KOG0781|consen 506 ALVGNDSVDQLKK 518 (587)
T ss_pred hhhCcHHHHHHHH
Confidence 8877766655444
No 242
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=57.08 E-value=1.6e+02 Score=26.99 Aligned_cols=91 Identities=14% Similarity=0.008 Sum_probs=50.3
Q ss_pred CccEEEEECCCCCCh-----HHHHHHHHHHHh-CCcEEEEecCCCCCCCCCCccccc--------h--------HHHHHH
Q 020199 63 TFNVILFLHGTSLSN-----KSYSKIFDHIAS-HGFIVVAPQLYTSIPPPSATNELN--------S--------AAEVAE 120 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~-----~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~~~~--------~--------~~~~~~ 120 (329)
...+|+.+-|..... .....+...|.+ .|-.+++.-..|.|... ....+. . ...-+.
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~G-fdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGG-FDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCccccc-chhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 356788888865422 334455556655 57777777667765543 111111 1 111111
Q ss_pred HHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHh
Q 020199 121 WLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLR 159 (329)
Q Consensus 121 ~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 159 (329)
-.+.++....+ -.++|+++|+|-|+.++-.+|+-
T Consensus 109 ~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYE-----PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcC-----CCCeEEEeeccchhHHHHHHHHH
Confidence 12222222211 23689999999999998877765
No 243
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=54.95 E-value=51 Score=32.62 Aligned_cols=52 Identities=10% Similarity=0.169 Sum_probs=34.8
Q ss_pred CC-CCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCC--CeeEEEeccCCccccc
Q 020199 191 DF-SIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNS--SRAHFVATDYGHMDIL 246 (329)
Q Consensus 191 ~i-~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~k~~~~~~~~gH~~~~ 246 (329)
++ ..|.+++| |..|.++|....-+. |........+. .-.++.++++-||+.+
T Consensus 552 ~L~GKPaIiVh---GR~DaLlPvnh~Sr~-Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 552 NLHGKPAIIVH---GRSDALLPVNHTSRP-YLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CcCCCceEEEe---cccceecccCCCchH-HHHHhhhhcccccceeEEEecCCeechhh
Confidence 66 68999999 888999886644432 33333333222 2368889999998764
No 244
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=53.69 E-value=1.5e+02 Score=27.88 Aligned_cols=91 Identities=19% Similarity=0.117 Sum_probs=52.1
Q ss_pred EEEECCCCCC-hHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCc------------cc------cch----HHHHHHHHH
Q 020199 67 ILFLHGTSLS-NKSYSKIFDHIASHGFIVVAPQLYTSIPPPSAT------------NE------LNS----AAEVAEWLP 123 (329)
Q Consensus 67 vi~~HG~~~~-~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~------------~~------~~~----~~~~~~~l~ 123 (329)
|+++ |...+ ...+.++.+.+.+.|..|+.+|.--.+.+.... .. ..+ +..+.+-+.
T Consensus 4 I~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 4 IAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 3333 44443 345788889999999999999972222222100 00 001 112222222
Q ss_pred HHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 124 QGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 124 ~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
..+..+... + ..+-|.-+|-|.|..++..+....|
T Consensus 83 ~~v~~l~~~-g--~i~Gvi~~GGs~GT~lat~aMr~LP 117 (403)
T PF06792_consen 83 RFVSDLYDE-G--KIDGVIGIGGSGGTALATAAMRALP 117 (403)
T ss_pred HHHHHHHhc-C--CccEEEEecCCccHHHHHHHHHhCC
Confidence 333333221 2 3456889999999999999988887
No 245
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=51.17 E-value=86 Score=28.03 Aligned_cols=141 Identities=16% Similarity=0.112 Sum_probs=67.4
Q ss_pred CCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCC----CCCCCCC--Cccc---------------------c
Q 020199 62 GTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLY----TSIPPPS--ATNE---------------------L 112 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~----g~~~~~~--~~~~---------------------~ 112 (329)
.+.|++|++-|..|+... ...+..++.+.+..-+++++- .-..+.. .+.. .
T Consensus 16 ~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~TsL 95 (366)
T KOG1532|consen 16 IQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTSL 95 (366)
T ss_pred ccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhhH
Confidence 457889999999887653 445666666665555555541 1000000 0100 1
Q ss_pred chHHHHHHHHHHHhhhhcCC--CccCC-CcceEEEEeChHHHHHHHH-HHhccccEEEEeccCCCCCCCCCCCCcccccC
Q 020199 113 NSAAEVAEWLPQGLQQNLPE--NTEAN-VSLVAVMGHSRGGQTAFAL-SLRYGFGAVIGLDPVAGTSKTTGLDPSILSFD 188 (329)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~--~~~~d-~~~i~l~GhS~GG~~a~~~-a~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~ 188 (329)
.-...-.+.+.+.+++..+. ..-+| +..|=++-+|..|.+.... |...|.--+..+|..........+...+++..
T Consensus 96 NLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~rs~~p~tFMSNMlYAcS 175 (366)
T KOG1532|consen 96 NLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPTVVVYVVDTPRSTSPTTFMSNMLYACS 175 (366)
T ss_pred HHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCeEEEEEecCCcCCCchhHHHHHHHHHH
Confidence 11111222222223222221 12233 4578999999999887764 44555222223332222111111111122222
Q ss_pred cc-CCCCCeEEEecC
Q 020199 189 SF-DFSIPVTVIGTG 202 (329)
Q Consensus 189 ~~-~i~~P~Lii~~~ 202 (329)
-+ +.+.|.+++...
T Consensus 176 ilyktklp~ivvfNK 190 (366)
T KOG1532|consen 176 ILYKTKLPFIVVFNK 190 (366)
T ss_pred HHHhccCCeEEEEec
Confidence 23 789999999833
No 246
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=49.93 E-value=45 Score=30.75 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=24.7
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc-------ccEEEEecc
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDP 170 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~-------v~~~v~~~p 170 (329)
...+|.++|||+|+.+.......-. |..++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 4457999999999988776554432 677777763
No 247
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=49.25 E-value=30 Score=26.81 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=22.6
Q ss_pred CCccEEEEECCCCCChHHHH--HHHHHHHhCC
Q 020199 62 GTFNVILFLHGTSLSNKSYS--KIFDHIASHG 91 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~--~~~~~la~~G 91 (329)
.+.|+|+-+||+.|....|. -+++.|-..|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 45799999999999988764 4566655555
No 248
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=45.33 E-value=28 Score=31.01 Aligned_cols=30 Identities=27% Similarity=0.488 Sum_probs=25.0
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecC
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~ 99 (329)
..|.|+|.-|.++. .+.|+..||.|+..|+
T Consensus 251 ~vPmi~fakG~g~~-------Le~l~~tG~DVvgLDW 280 (359)
T KOG2872|consen 251 PVPMILFAKGSGGA-------LEELAQTGYDVVGLDW 280 (359)
T ss_pred CCceEEEEcCcchH-------HHHHHhcCCcEEeecc
Confidence 45999999996653 5678899999999998
No 249
>PRK02399 hypothetical protein; Provisional
Probab=43.88 E-value=2.9e+02 Score=26.15 Aligned_cols=91 Identities=19% Similarity=0.161 Sum_probs=51.4
Q ss_pred EEECCCCCCh-HHHHHHHHHHHhCCcEEEEecCCCCCCCCCCc------------cc------cchHHH----HHHHHHH
Q 020199 68 LFLHGTSLSN-KSYSKIFDHIASHGFIVVAPQLYTSIPPPSAT------------NE------LNSAAE----VAEWLPQ 124 (329)
Q Consensus 68 i~~HG~~~~~-~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~------------~~------~~~~~~----~~~~l~~ 124 (329)
|++=|...+. +.+.++.+.+.++|..|+.+|.-..+.+.... .. ..+-.. +.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 3444555544 44777888888899999999973222111000 00 001111 1222222
Q ss_pred HhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 125 GLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 125 ~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
.+.++.. .. +.+-|.-+|-|.|..++..+....|
T Consensus 86 ~v~~L~~-~g--~i~gviglGGs~GT~lat~aMr~LP 119 (406)
T PRK02399 86 FVRELYE-RG--DVAGVIGLGGSGGTALATPAMRALP 119 (406)
T ss_pred HHHHHHh-cC--CccEEEEecCcchHHHHHHHHHhCC
Confidence 2222222 12 3567899999999999999988887
No 250
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.24 E-value=1.6e+02 Score=26.37 Aligned_cols=97 Identities=15% Similarity=0.082 Sum_probs=49.4
Q ss_pred CCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCC-----CCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEe
Q 020199 72 GTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPP-----SATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGH 146 (329)
Q Consensus 72 G~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~Gh 146 (329)
|.|.-...-..-.+++..=..+++++.| ..-.|- .+.........+++.+.....++ +. -+.-++++.|-
T Consensus 42 GtGWVdp~a~~a~E~l~~GD~A~va~QY-SylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~l-P~---~~RPkL~l~Ge 116 (289)
T PF10081_consen 42 GTGWVDPWAVDALEYLYGGDVAIVAMQY-SYLPSWLSFLVDRDAAREAARALFEAVYARWSTL-PE---DRRPKLYLYGE 116 (289)
T ss_pred CCCccCHHHHhHHHHHhCCCeEEEEecc-ccccchHHHhcccchHHHHHHHHHHHHHHHHHhC-Cc---ccCCeEEEecc
Confidence 4444333333445555433456666554 111110 01222233444555555544433 11 14458999999
Q ss_pred ChHHHHHHHHHHhcc-----ccEEEEeccCCC
Q 020199 147 SRGGQTAFALSLRYG-----FGAVIGLDPVAG 173 (329)
Q Consensus 147 S~GG~~a~~~a~~~~-----v~~~v~~~p~~~ 173 (329)
|+|++.+........ +.+.+...|...
T Consensus 117 SLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 117 SLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred CccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 999987766543322 778877776443
No 251
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=42.86 E-value=2e+02 Score=24.00 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=31.0
Q ss_pred CCccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecC
Q 020199 62 GTFNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~ 99 (329)
+..|.+|++-|..|+... -..+.+.|-.+|+.++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 456899999999997765 34567788889999999995
No 252
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.89 E-value=1.4e+02 Score=27.68 Aligned_cols=86 Identities=17% Similarity=0.072 Sum_probs=46.4
Q ss_pred EEEEECCCCCChHH-HHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEE
Q 020199 66 VILFLHGTSLSNKS-YSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVM 144 (329)
Q Consensus 66 ~vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~ 144 (329)
.|+++=||.|..+. ...+.....+.||.|+.+-.+-....................+...+... ..|..+|.+-
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~-----~~~~~pi~fh 114 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDY-----NSDPCPIIFH 114 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhc-----cCCcCceEEE
Confidence 45555566665554 34555666678999998776544222101111222222223332322222 1477788888
Q ss_pred EeChHHHHHHHH
Q 020199 145 GHSRGGQTAFAL 156 (329)
Q Consensus 145 GhS~GG~~a~~~ 156 (329)
-+|+||...+..
T Consensus 115 ~FS~ng~~~~~s 126 (350)
T KOG2521|consen 115 VFSGNGVRLMYS 126 (350)
T ss_pred EecCCceeehHH
Confidence 999999665543
No 253
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=40.54 E-value=32 Score=29.59 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=21.7
Q ss_pred EEEEECCCCCChHHHHHHHHHHHhCCcEEEEecC
Q 020199 66 VILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 66 ~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~ 99 (329)
.=||++|.|-+.+ +..||++||.|+++|.
T Consensus 45 ~rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 45 SVCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred CeEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 3567777666544 4578899999999986
No 254
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.87 E-value=52 Score=31.14 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=28.6
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEec
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQ 98 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d 98 (329)
..|.|+++=|-+.+..+-.-.+++|+.+||.++.+-
T Consensus 265 ~~P~V~Ilcgpgnnggdg~v~gRHL~~~G~~~vi~~ 300 (453)
T KOG2585|consen 265 QWPLVAILCGPGNNGGDGLVCGRHLAQHGYTPVIYY 300 (453)
T ss_pred CCceEEEEeCCCCccchhHHHHHHHHHcCceeEEEe
Confidence 457888888887776665568999999999988863
No 255
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=38.74 E-value=41 Score=29.72 Aligned_cols=38 Identities=16% Similarity=0.319 Sum_probs=31.0
Q ss_pred CCccEEEEECCCCCChH--HHHHHHHHHHhCCcEEEEecC
Q 020199 62 GTFNVILFLHGTSLSNK--SYSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~--~~~~~~~~la~~G~~Vv~~d~ 99 (329)
+..|+||++.|+.++.. ....+.+.|-.+|+.|.++..
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 45799999999987654 467888889899999999743
No 256
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=38.14 E-value=51 Score=26.86 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=22.1
Q ss_pred EEECCCCCChHH--HHHHHHHHHhCCcEEEEecC
Q 020199 68 LFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 68 i~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~ 99 (329)
.+..+-||.... -..++..|+++|+.|+.+|.
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 344444554433 34689999999999999998
No 257
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=37.52 E-value=1.9e+02 Score=22.14 Aligned_cols=15 Identities=13% Similarity=0.282 Sum_probs=12.0
Q ss_pred HHHHHHhCCcEEEEe
Q 020199 83 IFDHIASHGFIVVAP 97 (329)
Q Consensus 83 ~~~~la~~G~~Vv~~ 97 (329)
.-..|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 356788999999876
No 258
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=36.63 E-value=55 Score=26.60 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=26.8
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEe
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAP 97 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~ 97 (329)
+.+.|+++-|.|.+..+=-..+++|+++||.|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 45678888888877777668899999999998883
No 259
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=35.66 E-value=77 Score=24.72 Aligned_cols=36 Identities=14% Similarity=0.392 Sum_probs=24.5
Q ss_pred CccEEEEECCCCCCh-------------HHH-----------HHHHHHHHhCCcEEEEec
Q 020199 63 TFNVILFLHGTSLSN-------------KSY-----------SKIFDHIASHGFIVVAPQ 98 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~-------------~~~-----------~~~~~~la~~G~~Vv~~d 98 (329)
++..+||+||..+.. +.| ..-...|.+.|+.|+++-
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvVW 115 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVVW 115 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEEE
Confidence 478999999976521 112 123557888999999863
No 260
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=34.97 E-value=76 Score=27.10 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=23.9
Q ss_pred ccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecC
Q 020199 64 FNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~ 99 (329)
.+.=+|++|.|-+.+ +..||++||.|+.+|.
T Consensus 37 ~~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 37 PGGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp TSEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 345578888887755 4578899999999986
No 261
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=34.89 E-value=48 Score=24.70 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=25.4
Q ss_pred EEEECCCCCChHHHHHHHHHHHhC-CcEEEEecC
Q 020199 67 ILFLHGTSLSNKSYSKIFDHIASH-GFIVVAPQL 99 (329)
Q Consensus 67 vi~~HG~~~~~~~~~~~~~~la~~-G~~Vv~~d~ 99 (329)
+|++.|..|+... .+++.|+++ |+.++..|.
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5788888888774 568888886 999999987
No 262
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=34.40 E-value=3.1e+02 Score=25.89 Aligned_cols=59 Identities=10% Similarity=0.141 Sum_probs=32.8
Q ss_pred HHHHHHHHHhCCcEEEEecCCCC---CCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEe
Q 020199 80 YSKIFDHIASHGFIVVAPQLYTS---IPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGH 146 (329)
Q Consensus 80 ~~~~~~~la~~G~~Vv~~d~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~Gh 146 (329)
...-...|.+.|+.|+-|.. |. +.. ......+.++.+..+...+... .+...++.+.|-
T Consensus 135 ~~~Nl~~L~~~G~~ii~P~~-g~la~~~~--g~gr~~~~~~I~~~~~~~~~~~-----~l~gk~vlITgG 196 (399)
T PRK05579 135 TQRNLATLRSRGVEIIGPAS-GRLACGDV--GPGRMAEPEEIVAAAERALSPK-----DLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHHHCCCEEECCCC-ccccCCCc--CCCCCCCHHHHHHHHHHHhhhc-----ccCCCEEEEeCC
Confidence 45667778889999887653 32 222 2233455555566655544221 123356777776
No 263
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=34.09 E-value=1.6e+02 Score=29.07 Aligned_cols=24 Identities=17% Similarity=0.189 Sum_probs=19.7
Q ss_pred CCcceEEEEeChHHHHHHHHHHhc
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRY 160 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~ 160 (329)
...+-.++|||+|=+.++..|+..
T Consensus 263 GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 263 AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCCEEeecCHHHHHHHHHhCCC
Confidence 344559999999999999998865
No 264
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=33.22 E-value=1.4e+02 Score=24.02 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=21.1
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc--ccEEEEeccCC
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPVA 172 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~~ 172 (329)
...+|+++|-|..|.+-+.++...+ +..++..+|.-
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~K 104 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPLK 104 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEES-GGG
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChhh
Confidence 4578999999999999999887744 88888877653
No 265
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=33.13 E-value=1.2e+02 Score=28.57 Aligned_cols=41 Identities=7% Similarity=0.052 Sum_probs=30.7
Q ss_pred HHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc
Q 020199 121 WLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 121 ~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
.+.+++...-.....+|++++++.+.+-+..-++.....+|
T Consensus 129 a~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadp 169 (471)
T KOG0256|consen 129 AVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADP 169 (471)
T ss_pred HHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCC
Confidence 34444444444456679999999999999999988888877
No 266
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=32.62 E-value=3e+02 Score=23.06 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=41.9
Q ss_pred HHHHHHHhCCc-EEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeCh----HHHHHHHH
Q 020199 82 KIFDHIASHGF-IVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSR----GGQTAFAL 156 (329)
Q Consensus 82 ~~~~~la~~G~-~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~----GG~~a~~~ 156 (329)
..++.++.+|. .|+..+....... +...+.+-+.+.+.+. + -.+.++|+|. |+.++..+
T Consensus 67 ~~~~~l~~~G~d~V~~~~~~~~~~~--------~~e~~a~al~~~i~~~-------~-p~lVL~~~t~~~~~grdlaprl 130 (202)
T cd01714 67 EALREALAMGADRAILVSDRAFAGA--------DTLATAKALAAAIKKI-------G-VDLILTGKQSIDGDTGQVGPLL 130 (202)
T ss_pred HHHHHHHHcCCCEEEEEecccccCC--------ChHHHHHHHHHHHHHh-------C-CCEEEEcCCcccCCcCcHHHHH
Confidence 34455667787 5666665443222 2333344444434333 4 3589999999 88899998
Q ss_pred HHhcc---ccEEEEe
Q 020199 157 SLRYG---FGAVIGL 168 (329)
Q Consensus 157 a~~~~---v~~~v~~ 168 (329)
|.+.. +..++.+
T Consensus 131 AarLga~lvsdv~~l 145 (202)
T cd01714 131 AELLGWPQITYVSKI 145 (202)
T ss_pred HHHhCCCccceEEEE
Confidence 88765 4445444
No 267
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=32.29 E-value=2.6e+02 Score=26.51 Aligned_cols=111 Identities=16% Similarity=0.233 Sum_probs=65.1
Q ss_pred EEEecCCCCCccEEEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCCCCCC-----CCccccchHHHHHHHHHHHhhh
Q 020199 54 IIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPP-----SATNELNSAAEVAEWLPQGLQQ 128 (329)
Q Consensus 54 ~l~~P~~~~~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~ 128 (329)
.++.|......++++++--.|.. +.-...++.+++.|+.|+-+|..+.-..- .+...+.+++...+.+......
T Consensus 39 ~v~~p~g~~~~~villSd~~G~~-d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~ 117 (456)
T COG3946 39 PVLVPDGDPQGLVILLSDEAGIG-DQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADL 117 (456)
T ss_pred ccccccCCcceeeEEEEcccChh-hhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhc
Confidence 45667766556666666533322 22345577888899999999985542221 0223344555555544332211
Q ss_pred hcCCCccCCCcceEEEEeChHHHHHHHHHHhcc---ccEEEEeccCC
Q 020199 129 NLPENTEANVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLDPVA 172 (329)
Q Consensus 129 ~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~p~~ 172 (329)
- ...--.+.|--.||.++...+..-+ +.+.+..+|..
T Consensus 118 g-------~yr~PVl~g~g~Gg~~A~asaaqSp~atlag~Vsldp~~ 157 (456)
T COG3946 118 G-------VYRLPVLTGPGQGGTLAYASAAQSPDATLAGAVSLDPTP 157 (456)
T ss_pred c-------CcccceEeecCCCcHHHHHHHhhChhhhhcCccCCCCCC
Confidence 1 2233467789999999999888877 55555555443
No 268
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=31.86 E-value=4e+02 Score=25.07 Aligned_cols=75 Identities=9% Similarity=0.156 Sum_probs=38.6
Q ss_pred EEEEECCCC---CChHHHHHHHHHHHhCCcEEEEecCCCC--CCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 66 VILFLHGTS---LSNKSYSKIFDHIASHGFIVVAPQLYTS--IPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 66 ~vi~~HG~~---~~~~~~~~~~~~la~~G~~Vv~~d~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
.+++.+-.. +.......-...|.+.|+.|+-|..--. +.. ......+.++.++.+.+.+... ..+...+
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~--g~g~~~~~~~i~~~v~~~~~~~----~~~~~~~ 187 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDE--GKGRLAEPETIVKAAEREFSPK----EDLEGKR 187 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccc--cCCCCCCHHHHHHHHHHHHhhc----cccCCce
Confidence 444555432 3333345667778888988877663111 221 2233445566666665544321 1123456
Q ss_pred eEEEEe
Q 020199 141 VAVMGH 146 (329)
Q Consensus 141 i~l~Gh 146 (329)
+.+.|-
T Consensus 188 vlit~g 193 (390)
T TIGR00521 188 VLITAG 193 (390)
T ss_pred EEEecC
Confidence 666666
No 269
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=31.39 E-value=1.4e+02 Score=27.51 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=42.3
Q ss_pred HHHHHHHHhCCcEEEEecCCCC------------CCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeCh
Q 020199 81 SKIFDHIASHGFIVVAPQLYTS------------IPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSR 148 (329)
Q Consensus 81 ~~~~~~la~~G~~Vv~~d~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~ 148 (329)
..+.+.|+++|+.|.++-+--. -.|. .+.+.......+..+.+.+. ..|=++|.|+
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSN-GPGDP~~~~~~i~~ik~l~~-----------~~iPifGICL 258 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSN-GPGDPAPLDYAIETIKELLG-----------TKIPIFGICL 258 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeC-CCCChhHHHHHHHHHHHHhc-----------cCCCeEEEcH
Confidence 3668899999999999865331 1112 33444566666666666542 2346889999
Q ss_pred HHHHHHHHHHh
Q 020199 149 GGQTAFALSLR 159 (329)
Q Consensus 149 GG~~a~~~a~~ 159 (329)
|=.+...+.+.
T Consensus 259 GHQllalA~Ga 269 (368)
T COG0505 259 GHQLLALALGA 269 (368)
T ss_pred HHHHHHHhcCC
Confidence 98765555443
No 270
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=30.85 E-value=55 Score=29.03 Aligned_cols=24 Identities=33% Similarity=0.242 Sum_probs=19.2
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
...-.++|||+|-+.|+.+++...
T Consensus 81 i~p~~~~GhSlGE~aA~~~ag~~~ 104 (298)
T smart00827 81 VRPDAVVGHSLGEIAAAYVAGVLS 104 (298)
T ss_pred CcccEEEecCHHHHHHHHHhCCCC
Confidence 345689999999999988877544
No 271
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=30.12 E-value=76 Score=28.10 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=27.8
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCcEEEEec
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQ 98 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d 98 (329)
..||++|....+......+...|.++||..+.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3578999877677778888999999999998764
No 272
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.98 E-value=54 Score=24.98 Aligned_cols=21 Identities=24% Similarity=0.474 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCcEEEEecC
Q 020199 79 SYSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 79 ~~~~~~~~la~~G~~Vv~~d~ 99 (329)
.|...++.|+++||.|++.|-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEec
Confidence 477889999999999999996
No 273
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=29.76 E-value=60 Score=28.87 Aligned_cols=24 Identities=25% Similarity=0.068 Sum_probs=19.6
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
..+..++|||+|=+.|+.+++...
T Consensus 75 ~~P~~v~GhS~GE~aAa~~aG~~s 98 (295)
T TIGR03131 75 PRPSAVAGYSVGEYAAAVVAGVLT 98 (295)
T ss_pred CCCcEEeecCHHHHHHHHHhCCCC
Confidence 356789999999999998887654
No 274
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=29.69 E-value=2.6e+02 Score=26.53 Aligned_cols=100 Identities=14% Similarity=0.027 Sum_probs=61.9
Q ss_pred CCCccEEEEECCCCCChHH-HHHHHHHHHhCCcEEEEecCCCCCCCCCCccc--cchHHHHHHHHHHHhhhhcCCCccCC
Q 020199 61 KGTFNVILFLHGTSLSNKS-YSKIFDHIASHGFIVVAPQLYTSIPPPSATNE--LNSAAEVAEWLPQGLQQNLPENTEAN 137 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d 137 (329)
....|.|++.-|++..... ..+..+.| +-+=+.++||-.+.|...+.+ .-++.+.+++....+.++- .+=
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K----~iY 132 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFK----PIY 132 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHH----hhc
Confidence 3457999999999885432 23444444 346788899887776422222 2245555555444333321 112
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc--ccEEEE
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG--FGAVIG 167 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~--v~~~v~ 167 (329)
..+=...|.|-||++++..=.-+| +.+.|.
T Consensus 133 ~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVa 164 (448)
T PF05576_consen 133 PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVA 164 (448)
T ss_pred cCCceecCcCCCceeEEEEeeeCCCCCCeeee
Confidence 356677899999999988766677 776664
No 275
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=28.97 E-value=44 Score=30.23 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=20.1
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
...+-.++|||+|=+.|+.+++...
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aaG~ls 106 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAAGALS 106 (318)
T ss_dssp THCESEEEESTTHHHHHHHHTTSSS
T ss_pred ccccceeeccchhhHHHHHHCCccc
Confidence 3456789999999999998877654
No 276
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.89 E-value=1.7e+02 Score=23.94 Aligned_cols=78 Identities=8% Similarity=0.096 Sum_probs=50.4
Q ss_pred cEEEEECCCCCChHHHHHHHHHHHhCCc-EEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEE
Q 020199 65 NVILFLHGTSLSNKSYSKIFDHIASHGF-IVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAV 143 (329)
Q Consensus 65 p~vi~~HG~~~~~~~~~~~~~~la~~G~-~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l 143 (329)
-+|+++-|||...+....+ .....+ .++++|++.....- + .. ..+.|-+
T Consensus 12 ~LIvyFaGwgtpps~v~HL---ilpeN~dl~lcYDY~dl~ldf-----------------D-fs---------Ay~hirl 61 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHL---ILPENHDLLLCYDYQDLNLDF-----------------D-FS---------AYRHIRL 61 (214)
T ss_pred EEEEEEecCCCCHHHHhhc---cCCCCCcEEEEeehhhcCccc-----------------c-hh---------hhhhhhh
Confidence 3899999999887765433 122334 45566664422110 0 11 2357889
Q ss_pred EEeChHHHHHHHHHHhccccEEEEeccCC
Q 020199 144 MGHSRGGQTAFALSLRYGFGAVIGLDPVA 172 (329)
Q Consensus 144 ~GhS~GG~~a~~~a~~~~v~~~v~~~p~~ 172 (329)
+.+|||=.+|-++....+++..+.++...
T Consensus 62 vAwSMGVwvAeR~lqg~~lksatAiNGTg 90 (214)
T COG2830 62 VAWSMGVWVAERVLQGIRLKSATAINGTG 90 (214)
T ss_pred hhhhHHHHHHHHHHhhccccceeeecCCC
Confidence 99999999998888888877777777544
No 277
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=28.61 E-value=59 Score=24.87 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=27.0
Q ss_pred EEEEECCCCCChHHHHHHHHHHHhCCcEEEEecC
Q 020199 66 VILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 66 ~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~ 99 (329)
++|...|.+|+-.-+..+++.|.++|+.|...-.
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~ 34 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATP 34 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEET
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeec
Confidence 4677788888888888999999999999976544
No 278
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=27.84 E-value=28 Score=13.60 Aligned_cols=6 Identities=83% Similarity=1.630 Sum_probs=3.4
Q ss_pred ccCCcc
Q 020199 238 TDYGHM 243 (329)
Q Consensus 238 ~~~gH~ 243 (329)
.+.||+
T Consensus 2 ~dyghm 7 (9)
T PF08257_consen 2 DDYGHM 7 (9)
T ss_pred Cccccc
Confidence 355665
No 279
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=27.60 E-value=72 Score=27.56 Aligned_cols=73 Identities=18% Similarity=0.278 Sum_probs=46.2
Q ss_pred CccEEEEECCCCCChH--HHHHHHHHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcc
Q 020199 63 TFNVILFLHGTSLSNK--SYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSL 140 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~--~~~~~~~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~ 140 (329)
+.|+||++.|+.++.. ....+...|-.+||.|.++.-+... +..-.++-.+-.+ ++ ...+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~e------------E~~~p~lwRfw~~-lP-----~~G~ 90 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSDR------------ERTQWYFQRYVQH-LP-----AAGE 90 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCHH------------HHcChHHHHHHHh-CC-----CCCe
Confidence 3699999999987654 4667888888899999996443211 1112222222222 22 3457
Q ss_pred eEEEEeChHHHHH
Q 020199 141 VAVMGHSRGGQTA 153 (329)
Q Consensus 141 i~l~GhS~GG~~a 153 (329)
|+++=-|+=+.+.
T Consensus 91 i~IF~rSwY~~~l 103 (230)
T TIGR03707 91 IVLFDRSWYNRAG 103 (230)
T ss_pred EEEEeCchhhhHH
Confidence 8888888776643
No 280
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=26.98 E-value=6.6e+02 Score=25.28 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=30.7
Q ss_pred CCcceEEEEeChHHHHHHHHHHhcc---ccEEEEeccCCCC
Q 020199 137 NVSLVAVMGHSRGGQTAFALSLRYG---FGAVIGLDPVAGT 174 (329)
Q Consensus 137 d~~~i~l~GhS~GG~~a~~~a~~~~---v~~~v~~~p~~~~ 174 (329)
+...|+..+.|.||..++.+|.++. |.+++..+|...+
T Consensus 283 ~nT~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 283 ANTLVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred CCeEEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 3345677799999999999998876 8999888887655
No 281
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=26.92 E-value=32 Score=30.09 Aligned_cols=15 Identities=27% Similarity=0.558 Sum_probs=12.7
Q ss_pred CCcceEEEEeChHHH
Q 020199 137 NVSLVAVMGHSRGGQ 151 (329)
Q Consensus 137 d~~~i~l~GhS~GG~ 151 (329)
+.+.|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 557899999999963
No 282
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=26.80 E-value=70 Score=26.36 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=23.5
Q ss_pred EEEEECCCC---CChHHHHHHHHHHHhCCcEEEEec
Q 020199 66 VILFLHGTS---LSNKSYSKIFDHIASHGFIVVAPQ 98 (329)
Q Consensus 66 ~vi~~HG~~---~~~~~~~~~~~~la~~G~~Vv~~d 98 (329)
.||++|... .+......+...|.++||..+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 488889422 233456778888889999988764
No 283
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=26.56 E-value=86 Score=26.74 Aligned_cols=16 Identities=25% Similarity=0.351 Sum_probs=13.4
Q ss_pred HHHHHhCCcEEEEecC
Q 020199 84 FDHIASHGFIVVAPQL 99 (329)
Q Consensus 84 ~~~la~~G~~Vv~~d~ 99 (329)
+..||++||.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 4567889999999985
No 284
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=25.72 E-value=3.5e+02 Score=21.72 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=26.6
Q ss_pred cEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecC
Q 020199 65 NVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 65 p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~ 99 (329)
|.+|++-|..|+... =..+.+.|.+.|+.|+.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 689999999998765 23566778788999999985
No 285
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=25.69 E-value=87 Score=26.60 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=13.6
Q ss_pred HHHHHhCCcEEEEecC
Q 020199 84 FDHIASHGFIVVAPQL 99 (329)
Q Consensus 84 ~~~la~~G~~Vv~~d~ 99 (329)
+..||++||.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 5568899999999985
No 286
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=25.66 E-value=74 Score=28.05 Aligned_cols=24 Identities=21% Similarity=0.162 Sum_probs=19.5
Q ss_pred CcceEEEEeChHHHHHHHHHHhcc
Q 020199 138 VSLVAVMGHSRGGQTAFALSLRYG 161 (329)
Q Consensus 138 ~~~i~l~GhS~GG~~a~~~a~~~~ 161 (329)
...-.++|||+|=+.|+.+++...
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ls 105 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGALD 105 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCCCC
Confidence 345689999999999998887654
No 287
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=25.43 E-value=70 Score=30.93 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=32.8
Q ss_pred CCCCeEEEecCCCCCcccCccCCCCCCCHHHHHHHccCC------CeeEEEeccCCcccc
Q 020199 192 FSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNS------SRAHFVATDYGHMDI 245 (329)
Q Consensus 192 i~~P~Lii~~~~G~~D~~~~~~~~~~~~~~~~~~~~~~~------~k~~~~~~~~gH~~~ 245 (329)
-.--+|+.| |..|.+++|..... .+.+..+..... --+++++||.+|+.-
T Consensus 352 ~GGKLI~~H---G~aD~~I~p~~ti~-YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~g 407 (474)
T PF07519_consen 352 RGGKLILYH---GWADPLIPPQGTID-YYERVVARMGGALADVDDFYRLFMVPGMGHCGG 407 (474)
T ss_pred cCCeEEEEe---cCCCCccCCCcHHH-HHHHHHHhcccccccccceeEEEecCCCcccCC
Confidence 345788999 88899988775543 233333444322 126899999999643
No 288
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=25.20 E-value=1.5e+02 Score=27.52 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=26.6
Q ss_pred EEEECCCCCChHHHHHHHHHHHhCCcEEEEecCCCC
Q 020199 67 ILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTS 102 (329)
Q Consensus 67 vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d~~g~ 102 (329)
|+|+|...... |..+++.|+++|+.|.++-..+.
T Consensus 2 il~~~~~~p~~--~~~la~~L~~~G~~v~~~~~~~~ 35 (396)
T cd03818 2 ILFVHQNFPGQ--FRHLAPALAAQGHEVVFLTEPNA 35 (396)
T ss_pred EEEECCCCchh--HHHHHHHHHHCCCEEEEEecCCC
Confidence 67888766533 78899999999999998766444
No 289
>COG1152 CdhA CO dehydrogenase/acetyl-CoA synthase alpha subunit [Energy production and conversion]
Probab=25.00 E-value=4.4e+02 Score=26.30 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=28.5
Q ss_pred CCCccEEEEECCCCC---ChHHHHHHHHHHHhCCcEEEEe
Q 020199 61 KGTFNVILFLHGTSL---SNKSYSKIFDHIASHGFIVVAP 97 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~---~~~~~~~~~~~la~~G~~Vv~~ 97 (329)
-|.-|.||-+-|-.. ....-..+++.|.+++|.|+..
T Consensus 496 ~G~IPGIia~vgC~nyp~g~k~v~~iaeefl~RnyiVvtt 535 (772)
T COG1152 496 MGTIPGIIAVIGCPNYPAGTKDVYKIAEEFLKRNYIVVTT 535 (772)
T ss_pred ecCCCeEEEEecCCCCCcchhhHHHHHHHHHHcCeEEEec
Confidence 356777877777665 4455678899999999999984
No 290
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.74 E-value=4.1e+02 Score=22.07 Aligned_cols=32 Identities=34% Similarity=0.349 Sum_probs=26.0
Q ss_pred ceEEEEeChHHHHHHHHHHhcc--ccEEEEeccC
Q 020199 140 LVAVMGHSRGGQTAFALSLRYG--FGAVIGLDPV 171 (329)
Q Consensus 140 ~i~l~GhS~GG~~a~~~a~~~~--v~~~v~~~p~ 171 (329)
+..+-|-||||+.|+.+..++| +.++|.++..
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 4677899999999999999999 6666666643
No 291
>PF13728 TraF: F plasmid transfer operon protein
Probab=24.73 E-value=3e+02 Score=23.40 Aligned_cols=45 Identities=18% Similarity=0.309 Sum_probs=36.9
Q ss_pred CCccEEEEECCCCCChHHHHHHHHHHHh-CCcEEEEecCCCCCCCC
Q 020199 62 GTFNVILFLHGTSLSNKSYSKIFDHIAS-HGFIVVAPQLYTSIPPP 106 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~~~~~~~~la~-~G~~Vv~~d~~g~~~~~ 106 (329)
++..+++|.-|.+.-......+.+.|++ +|+.|+.++.-|.+.+.
T Consensus 120 ~~~gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 120 QKYGLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred hCeEEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcC
Confidence 4577889998988877778888888886 59999999998876665
No 292
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=24.49 E-value=1.1e+02 Score=26.20 Aligned_cols=34 Identities=24% Similarity=0.439 Sum_probs=26.3
Q ss_pred cEEEEECCCC-CChHHHHHHHHHHHhCCcEEEEec
Q 020199 65 NVILFLHGTS-LSNKSYSKIFDHIASHGFIVVAPQ 98 (329)
Q Consensus 65 p~vi~~HG~~-~~~~~~~~~~~~la~~G~~Vv~~d 98 (329)
..||++|... .+.+....+...|.++||..+.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 4688889753 345567888999999999998764
No 293
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=23.69 E-value=1.5e+02 Score=25.28 Aligned_cols=35 Identities=20% Similarity=0.100 Sum_probs=25.5
Q ss_pred EEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCC
Q 020199 66 VILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLY 100 (329)
Q Consensus 66 ~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~ 100 (329)
+|.+..+-||.... -..++..|+++|+.|+.+|.-
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 45666655554443 347788999999999999983
No 294
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=23.31 E-value=2.5e+02 Score=24.03 Aligned_cols=40 Identities=20% Similarity=0.271 Sum_probs=27.1
Q ss_pred CCCccEEEEECCCCCChH-HHHHHHHHHHhCCc-EEEEecCC
Q 020199 61 KGTFNVILFLHGTSLSNK-SYSKIFDHIASHGF-IVVAPQLY 100 (329)
Q Consensus 61 ~~~~p~vi~~HG~~~~~~-~~~~~~~~la~~G~-~Vv~~d~~ 100 (329)
.++.-+|++.||....+. .|.-+-..|..+|| .|++...-
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve 176 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVE 176 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 345679999999887654 45555566777898 66654433
No 295
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=23.03 E-value=3e+02 Score=24.46 Aligned_cols=34 Identities=12% Similarity=0.211 Sum_probs=25.9
Q ss_pred EEECCCCCCh-HHHHHHHHHHHhCCcEEEEecCCC
Q 020199 68 LFLHGTSLSN-KSYSKIFDHIASHGFIVVAPQLYT 101 (329)
Q Consensus 68 i~~HG~~~~~-~~~~~~~~~la~~G~~Vv~~d~~g 101 (329)
|+.+..+... ..+....+.|.++||.|+..++-.
T Consensus 3 iiapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~ 37 (282)
T cd07025 3 IVAPSSPIDEEERLERAIARLESLGLEVVVGPHVL 37 (282)
T ss_pred EEeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchh
Confidence 5566666555 777888889999999999988733
No 296
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=22.63 E-value=2.4e+02 Score=23.33 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=37.4
Q ss_pred CccEEEEECCCCCC---hHHHHHHHHHHHhCCcEEEEecCCCCCCCCC-CccccchHHHHHHHHHHHh
Q 020199 63 TFNVILFLHGTSLS---NKSYSKIFDHIASHGFIVVAPQLYTSIPPPS-ATNELNSAAEVAEWLPQGL 126 (329)
Q Consensus 63 ~~p~vi~~HG~~~~---~~~~~~~~~~la~~G~~Vv~~d~~g~~~~~~-~~~~~~~~~~~~~~l~~~~ 126 (329)
..+.++++||.... ...-..+.+.|.+.|..+...-+++.+-.-. ............+|+.+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 46889999998763 2334577888888887776666655443210 2222233445555555533
No 297
>PLN03194 putative disease resistance protein; Provisional
Probab=22.34 E-value=3.5e+02 Score=22.53 Aligned_cols=46 Identities=11% Similarity=0.190 Sum_probs=31.9
Q ss_pred eEEEEecCC--CCCccEEEEECCCCCChHH-HHHHHHHHHhCCcEEEEe
Q 020199 52 PLIIVTPAG--KGTFNVILFLHGTSLSNKS-YSKIFDHIASHGFIVVAP 97 (329)
Q Consensus 52 ~~~l~~P~~--~~~~p~vi~~HG~~~~~~~-~~~~~~~la~~G~~Vv~~ 97 (329)
..++.||.. ..+..=|++.|-+...... -..+...|.+.|+.|+.=
T Consensus 12 ~~~~~~~~~~~~~~~yDVFISFrG~DtR~~FvshL~~aL~~~GI~vF~D 60 (187)
T PLN03194 12 RLFLHYPSSSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLD 60 (187)
T ss_pred hhhcccccCCCCCCCCcEEEeCCCccccccHHHHHHHHHHHCCCEEEEc
Confidence 456778873 2345667777766554443 457888999999999883
No 298
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=21.77 E-value=52 Score=28.40 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=27.6
Q ss_pred ccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecCC
Q 020199 64 FNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQLY 100 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~~ 100 (329)
.|+||++.|+.++... ...+.+.|-.+|+.|.++.-+
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 5899999999987754 556777777889999997643
No 299
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.59 E-value=1.8e+02 Score=25.60 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=24.9
Q ss_pred EEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecC
Q 020199 66 VILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 66 ~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~ 99 (329)
+|.|. |=||.... -..++..||++|+.|+.+|.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEee
Confidence 45555 66665443 35789999999999999998
No 300
>CHL00175 minD septum-site determining protein; Validated
Probab=21.54 E-value=2.1e+02 Score=25.08 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=28.5
Q ss_pred ccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecC
Q 020199 64 FNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~ 99 (329)
..+|.+..|-||.... -..++..|++.|+.|+.+|.
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~ 52 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDA 52 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 4578888877776554 34778899999999999997
No 301
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=21.22 E-value=2.4e+02 Score=23.19 Aligned_cols=63 Identities=22% Similarity=0.400 Sum_probs=41.4
Q ss_pred HHHHHHHHHh-CCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHH
Q 020199 80 YSKIFDHIAS-HGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSL 158 (329)
Q Consensus 80 ~~~~~~~la~-~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~ 158 (329)
...+.+.++. .|+.++.|.|-|+ .+. -++..+||+... .+ ..+++.+++.|.|+........
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s-~pg-------~lKnaiD~l~~~--~~-------~~Kpv~~~~~s~g~~~~~~a~~ 120 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS-YPG-------ALKNAIDWLSRE--AL-------GGKPVLLLGTSGGGAGGLRAQN 120 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC-CCH-------HHHHHHHhCCHh--Hh-------CCCcEEEEecCCCchhHHHHHH
Confidence 4555666655 5888888887553 222 466677777553 22 5578899999988877776554
Q ss_pred h
Q 020199 159 R 159 (329)
Q Consensus 159 ~ 159 (329)
.
T Consensus 121 ~ 121 (184)
T COG0431 121 Q 121 (184)
T ss_pred H
Confidence 4
No 302
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=20.71 E-value=6.7e+02 Score=23.10 Aligned_cols=104 Identities=16% Similarity=0.238 Sum_probs=55.3
Q ss_pred HHHHhCCcEEEEecCCCCCCCCCCccccchHHHHHHHHHHHhhhhcCCCccCCCcceEEEEeChHHHHHHHHHHhcc---
Q 020199 85 DHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--- 161 (329)
Q Consensus 85 ~~la~~G~~Vv~~d~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~--- 161 (329)
++...+||.|+.+|.-|.-... ..+..-+.-+.+.+....+ -.+..+.++--+.-|.-++.-|....
T Consensus 215 ~~Akar~~DvvliDTAGRLhnk------~nLM~EL~KI~rV~~k~~~----~ap~e~llvlDAttGqnal~QAk~F~eav 284 (340)
T COG0552 215 QAAKARGIDVVLIDTAGRLHNK------KNLMDELKKIVRVIKKDDP----DAPHEILLVLDATTGQNALSQAKIFNEAV 284 (340)
T ss_pred HHHHHcCCCEEEEeCcccccCc------hhHHHHHHHHHHHhccccC----CCCceEEEEEEcccChhHHHHHHHHHHhc
Confidence 4444578888888887743321 1222222233333332211 13445788878888888888887654
Q ss_pred -ccEEEEeccCCCCCCCCCCCCcccccCccCCCCCeEEEecCCC
Q 020199 162 -FGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLG 204 (329)
Q Consensus 162 -v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~~~~G 204 (329)
+.++|+.--- +..+....-.. ...+++|+++++-+.+
T Consensus 285 ~l~GiIlTKlD-gtAKGG~il~I-----~~~l~~PI~fiGvGE~ 322 (340)
T COG0552 285 GLDGIILTKLD-GTAKGGIILSI-----AYELGIPIKFIGVGEG 322 (340)
T ss_pred CCceEEEEecc-cCCCcceeeeH-----HHHhCCCEEEEeCCCC
Confidence 7777753211 11111000000 0166899999986653
No 303
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=20.57 E-value=2.9e+02 Score=22.96 Aligned_cols=38 Identities=16% Similarity=0.022 Sum_probs=27.7
Q ss_pred CCccEEEEECCCCCChHH--HHHHHHHHHh-CCcEEEEecC
Q 020199 62 GTFNVILFLHGTSLSNKS--YSKIFDHIAS-HGFIVVAPQL 99 (329)
Q Consensus 62 ~~~p~vi~~HG~~~~~~~--~~~~~~~la~-~G~~Vv~~d~ 99 (329)
+...+|.+.-+-+|.... -..++..|+. +|+.|+.+|.
T Consensus 33 ~~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~ 73 (207)
T TIGR03018 33 KNNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDA 73 (207)
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 345678888766665443 3468889996 6999999987
No 304
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=20.56 E-value=2e+02 Score=20.44 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=19.6
Q ss_pred CccEEEEECCCCCChHHHHHHHHHHHhCCcEEEE
Q 020199 63 TFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVA 96 (329)
Q Consensus 63 ~~p~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~ 96 (329)
..|+|++++...-+ ...+..|.+.||.|..
T Consensus 61 ~~~ivv~C~~G~rs----~~aa~~L~~~G~~~~~ 90 (100)
T cd01523 61 DQEVTVICAKEGSS----QFVAELLAERGYDVDY 90 (100)
T ss_pred CCeEEEEcCCCCcH----HHHHHHHHHcCceeEE
Confidence 45788887754322 3456788889998433
No 305
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=20.31 E-value=2.6e+02 Score=23.04 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=26.2
Q ss_pred ccEEEEECCCCCChHH--HHHHHHHHHhCCcEEEEecC
Q 020199 64 FNVILFLHGTSLSNKS--YSKIFDHIASHGFIVVAPQL 99 (329)
Q Consensus 64 ~p~vi~~HG~~~~~~~--~~~~~~~la~~G~~Vv~~d~ 99 (329)
..+|.+..+-+|.... -..++..|++.|+.|+.+|.
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 4556666665554433 35788999999999999997
No 306
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=20.30 E-value=1.5e+02 Score=25.25 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=23.6
Q ss_pred CccEEEEECCCCCC-----hHHHHHHHHHHHhCCcEEEEe
Q 020199 63 TFNVILFLHGTSLS-----NKSYSKIFDHIASHGFIVVAP 97 (329)
Q Consensus 63 ~~p~vi~~HG~~~~-----~~~~~~~~~~la~~G~~Vv~~ 97 (329)
+.+.|++.+|.... .+.|..+++.|.++|+.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 46889999998773 345788999999999787763
No 307
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.15 E-value=1.9e+02 Score=25.20 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=26.0
Q ss_pred EEEEECCCCCChHHHHHHHHHHHhCCcEEEEec
Q 020199 66 VILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQ 98 (329)
Q Consensus 66 ~vi~~HG~~~~~~~~~~~~~~la~~G~~Vv~~d 98 (329)
.|+++-|-|.+..+=--.+++|..+||.|.++-
T Consensus 62 ~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 466777877777665678999999999988764
Done!