Your job contains 1 sequence.
>020205
MEMSLTASSFSKPLFFSNQSLSKTHFLTAANNTNTSTTIKTRRPTCIKAANSSPSIAQTL
STNWDVSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLD
AEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKR
YCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRD
NFMDAWEAKEYGLVDAVIDDGKPGLVAPTSEAIPPPKPRVWHMWNIEGSRKAKKKLPSEH
NLLQNGNIGGQGGGEDRGTEEEKKESAPV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020205
(329 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033344 - symbol:CLPP3 "CLP protease proteolyt... 1049 5.1e-106 1
TAIR|locus:2163538 - symbol:CLPP4 "CLP protease P4" speci... 522 2.6e-53 2
UNIPROTKB|P63786 - symbol:clpP "ATP-dependent Clp proteas... 539 5.6e-52 1
TIGR_CMR|CPS_3785 - symbol:CPS_3785 "ATP-dependent Clp pr... 528 8.3e-51 1
TIGR_CMR|SO_1794 - symbol:SO_1794 "ATP-dependent Clp prot... 527 1.1e-50 1
TIGR_CMR|BA_5380 - symbol:BA_5380 "ATP-dependent Clp prot... 526 1.3e-50 1
TIGR_CMR|CHY_0325 - symbol:CHY_0325 "ATP-dependent Clp pr... 526 1.3e-50 1
UNIPROTKB|P0A6G7 - symbol:clpP species:83333 "Escherichia... 522 3.6e-50 1
TIGR_CMR|VC_1922 - symbol:VC_1922 "ATP-dependent Clp prot... 521 4.6e-50 1
TAIR|locus:2196120 - symbol:CLPP5 "nuclear encoded CLP pr... 511 5.2e-49 1
TIGR_CMR|GSU_1792 - symbol:GSU_1792 "ATP-dependent Clp pr... 494 3.3e-47 1
TIGR_CMR|CJE_0185 - symbol:CJE_0185 "ATP-dependent Clp pr... 479 1.3e-45 1
TIGR_CMR|BA_2788 - symbol:BA_2788 "ATP-dependent Clp prot... 477 2.1e-45 1
TIGR_CMR|DET_0710 - symbol:DET_0710 "ATP-dependent Clp pr... 462 8.1e-44 1
UNIPROTKB|P0A526 - symbol:clpP1 "ATP-dependent Clp protea... 460 1.3e-43 1
TIGR_CMR|APH_0970 - symbol:APH_0970 "ATP-dependent Clp pr... 458 2.2e-43 1
TIGR_CMR|CBU_0738 - symbol:CBU_0738 "ATP-dependent Clp pr... 453 7.3e-43 1
TIGR_CMR|ECH_0901 - symbol:ECH_0901 "ATP-dependent Clp pr... 442 1.1e-41 1
TIGR_CMR|NSE_0752 - symbol:NSE_0752 "ATP-dependent Clp pr... 430 2.0e-40 1
MGI|MGI:1858213 - symbol:Clpp "ClpP caseinolytic peptidas... 419 2.9e-39 1
UNIPROTKB|P63783 - symbol:clpP2 "ATP-dependent Clp protea... 418 3.7e-39 1
RGD|1588583 - symbol:Clpp "ClpP caseinolytic peptidase, A... 418 3.7e-39 1
WB|WBGene00014172 - symbol:clpp-1 species:6239 "Caenorhab... 415 7.8e-39 1
ZFIN|ZDB-GENE-030131-7860 - symbol:clpp "ClpP caseinolyti... 413 1.3e-38 1
UNIPROTKB|Q16740 - symbol:CLPP "Putative ATP-dependent Cl... 412 1.6e-38 1
TAIR|locus:2178282 - symbol:NCLPP7 "nuclear-encoded CLP p... 409 3.4e-38 1
GENEDB_PFALCIPARUM|PFC0310c - symbol:PFC0310c "ATP-depend... 407 5.5e-38 1
UNIPROTKB|O97252 - symbol:PFC0310c "ATP-dependent CLP pro... 407 5.5e-38 1
UNIPROTKB|Q2KHU4 - symbol:CLPP "Putative ATP-dependent Cl... 402 1.9e-37 1
UNIPROTKB|E2QUV8 - symbol:CLPP "ATP-dependent Clp proteas... 401 2.4e-37 1
UNIPROTKB|F1SBT2 - symbol:CLPP "ATP-dependent Clp proteas... 394 1.3e-36 1
TIGR_CMR|SPO_1003 - symbol:SPO_1003 "ATP-dependent Clp pr... 394 1.3e-36 1
FB|FBgn0032229 - symbol:CG5045 species:7227 "Drosophila m... 379 5.1e-35 1
UNIPROTKB|G4MLM6 - symbol:MGG_06757 "ATP-dependent Clp pr... 361 4.1e-33 1
UNIPROTKB|P0C312 - symbol:clpP "ATP-dependent Clp proteas... 352 3.7e-32 1
UNIPROTKB|P0C313 - symbol:clpP "ATP-dependent Clp proteas... 352 3.7e-32 1
UNIPROTKB|P0C314 - symbol:clpP "ATP-dependent Clp proteas... 352 3.7e-32 1
UNIPROTKB|Q6ENE9 - symbol:clpP "ATP-dependent Clp proteas... 352 3.7e-32 1
UNIPROTKB|Q6E6T0 - symbol:Q6E6T0 "ATP-dependent Clp prote... 347 1.3e-31 1
TAIR|locus:2034625 - symbol:CLP2 "CLP protease proteolyti... 347 1.3e-31 1
TAIR|locus:2130449 - symbol:CLPR4 "CLP protease R subunit... 301 9.4e-27 1
TAIR|locus:2031070 - symbol:CLPR1 "CLP protease proteolyt... 261 1.6e-22 1
GENEDB_PFALCIPARUM|PF14_0348 - symbol:PF14_0348 "ATP-depe... 244 1.0e-20 1
UNIPROTKB|Q8IL98 - symbol:PF14_0348 "ATP-dependent Clp pr... 244 1.0e-20 1
TIGR_CMR|DET_1086 - symbol:DET_1086 "ATP-dependent Clp pr... 158 9.3e-10 1
TIGR_CMR|SO_2964 - symbol:SO_2964 "ClpP protease family p... 138 5.7e-07 1
TIGR_CMR|BA_4092 - symbol:BA_4092 "prophage LambdaBa02, C... 121 3.9e-05 1
>TAIR|locus:2033344 [details] [associations]
symbol:CLPP3 "CLP protease proteolytic subunit 3"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC013288 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AF032123 EMBL:AB022328 EMBL:AC079285
EMBL:AF370528 EMBL:AY072526 EMBL:AY087349 IPI:IPI00538968
PIR:T52041 PIR:T52453 RefSeq:NP_564880.1 UniGene:At.21167 PDB:1R90
PDBsum:1R90 ProteinModelPortal:Q9SXJ6 SMR:Q9SXJ6 IntAct:Q9SXJ6
STRING:Q9SXJ6 MEROPS:S14.A03 PaxDb:Q9SXJ6 PRIDE:Q9SXJ6
ProMEX:Q9SXJ6 EnsemblPlants:AT1G66670.1 GeneID:842985
KEGG:ath:AT1G66670 GeneFarm:804 TAIR:At1g66670 InParanoid:Q9SXJ6
OMA:NMLLRQR PhylomeDB:Q9SXJ6 ProtClustDB:CLSN2689048
Genevestigator:Q9SXJ6 Uniprot:Q9SXJ6
Length = 309
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 205/309 (66%), Positives = 244/309 (78%)
Query: 1 MEMSL--TASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANS-SPSIA 57
MEMSL +SS S P+ N +F KT +P C++++ S S
Sbjct: 1 MEMSLRLASSSTSNPICLLNPG-KNLNFPIRNHRIP-----KTSKPFCVRSSMSLSKPPR 54
Query: 58 QTLSTNWDVSNFAVNNNTSSPY-LPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQL 116
QTLS+NWDVS+F++++ SP LP FEELDTTNMLLRQRI+FLGSQVDD+TAD +ISQL
Sbjct: 55 QTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQL 114
Query: 117 LFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGS 176
L LDAEDS++DI LFINSPGGS+TAGMGIYDAMK CKADVST+CLGLAASMGAFLLA+GS
Sbjct: 115 LLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGS 174
Query: 177 KGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELD 236
KGKRYCMPN++VMIHQPLGTAGGKAT+MSIRIREM YHK+KLNKI SR TGKP +IE D
Sbjct: 175 KGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESD 234
Query: 237 TDRDNFMDAWEAKEYGLVDAVIDDGKPGLVAPTSEAIPPPKPRVWHMWNIEGSRKAKKKL 296
TDRDNF++ WEAKEYGL+DAVIDDGKPGL+AP + PPPK +VW +W +EG++K L
Sbjct: 235 TDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTPPPKTKVWDLWKVEGTKKDNTNL 294
Query: 297 PSEHNLLQN 305
PSE ++ QN
Sbjct: 295 PSERSMTQN 303
>TAIR|locus:2163538 [details] [associations]
symbol:CLPP4 "CLP protease P4" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009840 "chloroplastic endopeptidase Clp complex"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009532 "plastid stroma" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0048510 GO:GO:0009535
eggNOG:COG0740 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022329 EMBL:AJ000930
EMBL:AB018113 EMBL:AY042832 EMBL:BT006321 EMBL:AY087717
IPI:IPI00548920 PIR:T52452 RefSeq:NP_568644.1 UniGene:At.387
UniGene:At.67124 PDB:1R91 PDBsum:1R91 ProteinModelPortal:Q94B60
SMR:Q94B60 IntAct:Q94B60 STRING:Q94B60 MEROPS:S14.010 PaxDb:Q94B60
PRIDE:Q94B60 EnsemblPlants:AT5G45390.1 GeneID:834575
KEGG:ath:AT5G45390 GeneFarm:801 TAIR:At5g45390 InParanoid:Q94B60
OMA:ERDYWMD PhylomeDB:Q94B60 ProtClustDB:CLSN2689933
Genevestigator:Q94B60 Uniprot:Q94B60
Length = 292
Score = 522 (188.8 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 108/229 (47%), Positives = 151/229 (65%)
Query: 53 SPSIAQTLSTNWDVSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFI 112
SP + T + +N ++ + + + E D +LLR+RI+FLGS +DD AD I
Sbjct: 45 SPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAI 104
Query: 113 ISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLL 172
+SQLL LDA+D KKDI+LFINSPGGS++A M IYD ++L +ADVSTI LG+AAS + +L
Sbjct: 105 MSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL 164
Query: 173 AAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQ 232
AG+KGKR+ MPN R+MIHQPLG A G+A D+ I+ +E+ ++K + I++ T + +Q
Sbjct: 165 GAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQ 224
Query: 233 IELDTDRDNFMDAWEAKEYGLVDAVIDDGKPGLVAPTSEAIPPP-KPRV 280
+ D DRD +M EA EYGL+D VID + P E +P KPRV
Sbjct: 225 VLKDIDRDRYMSPIEAVEYGLIDGVIDGDS---IIPL-EPVPDRVKPRV 269
Score = 47 (21.6 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 1 MEMSLTASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANSSPSIAQT 59
++ SL +S + S+ S K + L ++T P+ ++ AN+S ++QT
Sbjct: 10 LKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQT 68
>UNIPROTKB|P63786 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:196620 "Staphylococcus aureus subsp. aureus MW2"
[GO:0042802 "identical protein binding" evidence=IPI]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 MEROPS:S14.001
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:BA000033 RefSeq:NP_645547.1 PDB:3ST9
PDB:3STA PDBsum:3ST9 PDBsum:3STA ProteinModelPortal:P63786
SMR:P63786 STRING:P63786 EnsemblBacteria:EBSTAT00000026409
GeneID:1002841 GenomeReviews:BA000033_GR KEGG:sam:MW0730
PATRIC:19568014 BioCyc:SAUR196620:GJ9Z-751-MONOMER BindingDB:P63786
EvolutionaryTrace:P63786 Uniprot:P63786
Length = 195
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 105/172 (61%), Positives = 135/172 (78%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGSQ+DD A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG IY
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + KLN+ILS TG+ +++I+ DTDRDNF+ A EAKEYGL+D V+
Sbjct: 139 AANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
>TIGR_CMR|CPS_3785 [details] [associations]
symbol:CPS_3785 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:167879 "Colwellia psychrerythraea 34H"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000083
GenomeReviews:CP000083_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA RefSeq:YP_270452.1
ProteinModelPortal:Q47XL8 SMR:Q47XL8 STRING:Q47XL8 GeneID:3522356
KEGG:cps:CPS_3785 PATRIC:21470483
BioCyc:CPSY167879:GI48-3807-MONOMER Uniprot:Q47XL8
Length = 220
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 100/173 (57%), Positives = 133/173 (76%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++R+IFL QV+D A+ II+QLLFL++E KDI L+INSPGGSVTAGM IY
Sbjct: 43 DIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGMAIY 102
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D MK K ++ST+C+G AASMGAFLL+ G KGKRYC+PNARVMIHQPLG G+A+D I
Sbjct: 103 DTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEI 162
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+E+ + K KLNK+++ TG+ + ++ DTDRDNF+ A A EYGLVD++++
Sbjct: 163 HAKEILFIKDKLNKLMAEHTGQTLDKVSQDTDRDNFLSAEAAVEYGLVDSILE 215
>TIGR_CMR|SO_1794 [details] [associations]
symbol:SO_1794 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:211586 "Shewanella oneidensis MR-1"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE014299
GenomeReviews:AE014299_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_717403.1 ProteinModelPortal:Q8EG19 SMR:Q8EG19
GeneID:1169567 KEGG:son:SO_1794 PATRIC:23523211 Uniprot:Q8EG19
Length = 202
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 104/172 (60%), Positives = 136/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RIIFL QV++ A+ I++QLLFL++E KDI L+INSPGGSVTAGM IY
Sbjct: 27 DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGMAIY 86
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K +VST+C+G AASMGAFLLA G KGKR+C+PN+RVMIHQPLG G+A+D++I
Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAI 146
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+E+ K KLN++L+ TG+P++ IE DTDRDNFM A +A EYGLVDAV+
Sbjct: 147 HAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATQAVEYGLVDAVM 198
>TIGR_CMR|BA_5380 [details] [associations]
symbol:BA_5380 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:NP_847553.1
RefSeq:YP_022039.1 RefSeq:YP_031239.1 ProteinModelPortal:Q81X63
SMR:Q81X63 IntAct:Q81X63 DNASU:1084924
EnsemblBacteria:EBBACT00000008224 EnsemblBacteria:EBBACT00000015397
EnsemblBacteria:EBBACT00000024106 GeneID:1084924 GeneID:2818633
GeneID:2848145 KEGG:ban:BA_5380 KEGG:bar:GBAA_5380 KEGG:bat:BAS5000
BioCyc:BANT260799:GJAJ-5075-MONOMER
BioCyc:BANT261594:GJ7F-5251-MONOMER Uniprot:Q81X63
Length = 193
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 99/171 (57%), Positives = 133/171 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGS +DD A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IY
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K VSTIC+G+AASMGAFLLAAG KGKRY +PN+ MIHQPLG A G+AT++ I
Sbjct: 79 DTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ + + + KLN+IL+ TG+P++ ++ DTDRDNFM A +A EYGL+D +
Sbjct: 139 AAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKI 189
>TIGR_CMR|CHY_0325 [details] [associations]
symbol:CHY_0325 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:YP_359188.1
ProteinModelPortal:Q3AF96 SMR:Q3AF96 STRING:Q3AF96 GeneID:3726391
KEGG:chy:CHY_0325 PATRIC:21273821
BioCyc:CHYD246194:GJCN-326-MONOMER Uniprot:Q3AF96
Length = 195
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 101/172 (58%), Positives = 133/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ R IF+G +DD A+ +I+Q+LFL+AED +KDI L+INSPGG +TAGM IY
Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGMAIY 79
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G AASMGAFLLAAG+KGKR+ +P AR+MIHQPLG G+ATD+ I
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDI 139
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
RE+ + LN++L++ TG+P ++IE DT+RD FM A EAKEYG++D VI
Sbjct: 140 HAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
>UNIPROTKB|P0A6G7 [details] [associations]
symbol:clpP species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009266
"response to temperature stimulus" evidence=EXP] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005524 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0004252
GO:GO:0008236 GO:GO:0009408 EMBL:U82664 GO:GO:0006515
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:J05534 PIR:B36575 RefSeq:NP_414971.1
RefSeq:YP_488729.1 PDB:1TYF PDB:1YG6 PDB:1YG8 PDB:2FZS PDB:3HLN
PDB:3MT6 PDBsum:1TYF PDBsum:1YG6 PDBsum:1YG8 PDBsum:2FZS
PDBsum:3HLN PDBsum:3MT6 ProteinModelPortal:P0A6G7 SMR:P0A6G7
DIP:DIP-31838N IntAct:P0A6G7 SWISS-2DPAGE:P0A6G7 PaxDb:P0A6G7
PRIDE:P0A6G7 EnsemblBacteria:EBESCT00000004586
EnsemblBacteria:EBESCT00000016552 EnsemblBacteria:EBESCT00000232597
GeneID:12931742 GeneID:945082 KEGG:ecj:Y75_p0425 KEGG:eco:b0437
PATRIC:32116027 EchoBASE:EB0156 EcoGene:EG10158
BioCyc:EcoCyc:EG10158-MONOMER BioCyc:ECOL316407:JW0427-MONOMER
BioCyc:MetaCyc:EG10158-MONOMER EvolutionaryTrace:P0A6G7
Genevestigator:P0A6G7 Uniprot:P0A6G7
Length = 207
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 99/172 (57%), Positives = 136/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
RE+ K ++N++++ TG+ ++QIE DT+RD F+ A EA EYGLVD+++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>TIGR_CMR|VC_1922 [details] [associations]
symbol:VC_1922 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 PIR:G82139 RefSeq:NP_231556.1
ProteinModelPortal:Q9KQS6 SMR:Q9KQS6 DNASU:2613551 GeneID:2613551
KEGG:vch:VC1922 PATRIC:20082888 Uniprot:Q9KQS6
Length = 200
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 101/172 (58%), Positives = 134/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++R+IFL QV+D A+ +++QLLFL++E+ KDI L+INSPGGSVTAGM IY
Sbjct: 24 DIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIY 83
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K +VST+C+G A SMGAFLLA G+ GKRY +PN+RVMIHQPLG G+A+D+ I
Sbjct: 84 DTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQI 143
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+E+ K KLN++L+ TG+P++ IE DTDRDNFM A +A EYGLVDAV+
Sbjct: 144 HAQEILTIKNKLNRLLAEHTGQPIEVIERDTDRDNFMSADQAVEYGLVDAVL 195
>TAIR|locus:2196120 [details] [associations]
symbol:CLPP5 "nuclear encoded CLP protease 5"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508
GO:GO:0009941 GO:GO:0004252 EMBL:AC022521 GO:GO:0009534
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022326 EMBL:AJ012278
EMBL:BT024859 EMBL:AY084394 IPI:IPI00546407 PIR:T52455
RefSeq:NP_563657.1 UniGene:At.21093 PDB:1R92 PDBsum:1R92
ProteinModelPortal:Q9S834 SMR:Q9S834 IntAct:Q9S834 STRING:Q9S834
MEROPS:S14.A01 PaxDb:Q9S834 PRIDE:Q9S834 ProMEX:Q9S834
EnsemblPlants:AT1G02560.1 GeneID:839433 KEGG:ath:AT1G02560
GeneFarm:806 TAIR:At1g02560 InParanoid:Q9S834 OMA:QGLGMVP
PhylomeDB:Q9S834 ProtClustDB:CLSN2687625 Genevestigator:Q9S834
Uniprot:Q9S834
Length = 298
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 100/169 (59%), Positives = 128/169 (75%)
Query: 90 NMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAM 149
+ L + RII G VDD A+ I++QLL+LDA D KDI +++NSPGGSVTAGM I+D M
Sbjct: 117 SQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTM 176
Query: 150 KLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIR 209
+ + DVST+C+GLAASMGAFLL+AG+KGKRY +PN+R+MIHQPLG A G TD+ I+
Sbjct: 177 RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQAN 236
Query: 210 EMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
EM +HK LN L+ TG+ +++I DTDRD FM A EAKEYGL+D VI
Sbjct: 237 EMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
>TIGR_CMR|GSU_1792 [details] [associations]
symbol:GSU_1792 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE017180
GenomeReviews:AE017180_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_952842.1 ProteinModelPortal:Q74C82 SMR:Q74C82
GeneID:2686403 KEGG:gsu:GSU1792 PATRIC:22026431
BioCyc:GSUL243231:GH27-1812-MONOMER Uniprot:Q74C82
Length = 199
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 96/177 (54%), Positives = 130/177 (73%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RIIFLG VDD A+ +I+Q+LFL+AED KDI L+INSPGG VT+GM IY
Sbjct: 18 DIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGVVTSGMAIY 77
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ KA VSTIC+G AASMGA LL+ G KGKR+ + ++R+MIHQPLG G+ATD+ I
Sbjct: 78 DTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIMIHQPLGGFQGQATDIHI 137
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKP 263
+E+ K +LN+IL+ TG+ + ++E DT+RD FM EAK+YG++D +I+ P
Sbjct: 138 HAQEILKLKKRLNEILAENTGQQLAKVEADTERDYFMSGAEAKDYGIIDNIIERNTP 194
>TIGR_CMR|CJE_0185 [details] [associations]
symbol:CJE_0185 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:195099 "Campylobacter jejuni RM1221"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000025
GenomeReviews:CP000025_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ERDYWMD
RefSeq:YP_178209.1 ProteinModelPortal:Q5HWX6 SMR:Q5HWX6
STRING:Q5HWX6 GeneID:3230948 KEGG:cjr:CJE0185 PATRIC:20042079
BioCyc:CJEJ195099:GJC0-190-MONOMER Uniprot:Q5HWX6
Length = 194
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 95/173 (54%), Positives = 126/173 (72%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L ++ D A I++QLLFL+AED KDI L+INSPGG +T+G IY
Sbjct: 18 DIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIY 77
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M K DV TIC+G AASMGAFLL+ G++GKR+ +PN+R+MIHQPLG A G+ATD+ I
Sbjct: 78 DTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEI 137
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+ +E+ K LN IL++ T + V +I DT+RD FM A EAKEYGL+D V++
Sbjct: 138 QAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLE 190
>TIGR_CMR|BA_2788 [details] [associations]
symbol:BA_2788 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 RefSeq:NP_845137.1 RefSeq:YP_019430.1
RefSeq:YP_028858.1 ProteinModelPortal:Q81PL4 SMR:Q81PL4
MEROPS:S14.001 DNASU:1086459 EnsemblBacteria:EBBACT00000008369
EnsemblBacteria:EBBACT00000015150 EnsemblBacteria:EBBACT00000020004
GeneID:1086459 GeneID:2817074 GeneID:2849926 KEGG:ban:BA_2788
KEGG:bar:GBAA_2788 KEGG:bat:BAS2599 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 OMA:DIVTICI ProtClustDB:CLSK916804
BioCyc:BANT260799:GJAJ-2663-MONOMER
BioCyc:BANT261594:GJ7F-2758-MONOMER InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 Uniprot:Q81PL4
Length = 193
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 88/172 (51%), Positives = 127/172 (73%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RI+ +GS+++D A +++QLLFL+AED++KDI L+INSPGGS TAG I
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAIL 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M L K DV T+C+G AAS GA LL +G+KGKR+ +PN+ +MIHQPLG A G+AT++ I
Sbjct: 79 DTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + K +NK+++ TG+P++++ DT+RD FM A EAK YG+VD V+
Sbjct: 139 TAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEAKAYGIVDDVV 190
>TIGR_CMR|DET_0710 [details] [associations]
symbol:DET_0710 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000027
GenomeReviews:CP000027_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
ProtClustDB:PRK00277 OMA:ERDYWMD RefSeq:YP_181451.1
ProteinModelPortal:Q3Z8J8 SMR:Q3Z8J8 STRING:Q3Z8J8 GeneID:3229949
KEGG:det:DET0710 PATRIC:21608483 BioCyc:DETH243164:GJNF-711-MONOMER
Uniprot:Q3Z8J8
Length = 200
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 89/177 (50%), Positives = 131/177 (74%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D ++LL++RIIFLGSQ++D A+ +I+QLLFLD ED KDI L+I+SPGG ++AG+ +Y
Sbjct: 23 DIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLAMY 82
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+L + VSTIC+G+AASM LL AG+KGKRY +PNA + +HQ +G A G+A+D+ I
Sbjct: 83 DTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGAQGQASDIEI 142
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKP 263
RE+ + L IL + TG+P+++I D+DRD +++A +A EYGL+D ++ KP
Sbjct: 143 AAREIMRQQDILRNILVKHTGQPMEKIIHDSDRDYYLNAQQAVEYGLIDEILQ--KP 197
>UNIPROTKB|P0A526 [details] [associations]
symbol:clpP1 "ATP-dependent Clp protease proteolytic
subunit 1" species:1773 "Mycobacterium tuberculosis" [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006508 GO:GO:0004252 EMBL:BX842579
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 PIR:D70865 RefSeq:NP_337022.1
RefSeq:YP_006515898.1 RefSeq:YP_177883.1 PDB:2C8T PDB:2CBY PDB:2CE3
PDBsum:2C8T PDBsum:2CBY PDBsum:2CE3 ProteinModelPortal:P0A526
SMR:P0A526 MEROPS:S14.008 PhosSite:P12071649 PRIDE:P0A526
EnsemblBacteria:EBMYCT00000001586 EnsemblBacteria:EBMYCT00000071224
GeneID:13319171 GeneID:888176 GeneID:925798 KEGG:mtc:MT2536
KEGG:mtu:Rv2461c KEGG:mtv:RVBD_2461c PATRIC:18127330
TubercuList:Rv2461c OMA:DPTRDIS ProtClustDB:PRK00277
EvolutionaryTrace:P0A526 Uniprot:P0A526
Length = 200
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 87/167 (52%), Positives = 125/167 (74%)
Query: 92 LLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKL 151
LL +RIIFLGS+V+D A+ + +Q+L L AED+ KDI L+INSPGGS++AGM IYD M L
Sbjct: 24 LLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVL 83
Query: 152 CKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 211
D++T +G+AASMG FLLAAG+KGKRY +P+AR+++HQPLG G A D++I+ +
Sbjct: 84 APCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQF 143
Query: 212 SYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ K ++ ++ + TG+P+++IE D+DRD + A EA EYG VD +I
Sbjct: 144 AVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHII 190
>TIGR_CMR|APH_0970 [details] [associations]
symbol:APH_0970 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000235
GenomeReviews:CP000235_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 RefSeq:YP_505537.1
ProteinModelPortal:Q2GJB4 SMR:Q2GJB4 STRING:Q2GJB4 GeneID:3930516
KEGG:aph:APH_0970 PATRIC:20950656 OMA:ARMNELM
BioCyc:APHA212042:GHPM-982-MONOMER Uniprot:Q2GJB4
Length = 197
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 89/173 (51%), Positives = 127/173 (73%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RIIF+ ++D A I++QL+FL+AED +KDI ++INSPGG VTAG+ IY
Sbjct: 19 DIYSRLLKERIIFVTGPIEDEMASLIVAQLVFLEAEDPEKDISMYINSPGGVVTAGLSIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K +V+T+CLG AASMG+ LL AG+ G R +PN+RVMIHQP G G+ATD+ I
Sbjct: 79 DTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRVMIHQPSGGFRGQATDIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
RE+ K +LN+I R TGK +++IE +RDNFM A +A+++G++D VI+
Sbjct: 139 HAREILEIKRRLNEIFVRHTGKSLEEIESSMERDNFMIAEKARDFGIIDKVIE 191
>TIGR_CMR|CBU_0738 [details] [associations]
symbol:CBU_0738 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:227377 "Coxiella burnetii RSA 493"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE016828
GenomeReviews:AE016828_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ARMNELM
RefSeq:NP_819764.1 PDB:3Q7H PDBsum:3Q7H ProteinModelPortal:Q83DJ2
SMR:Q83DJ2 GeneID:1208629 KEGG:cbu:CBU_0738 PATRIC:17930167
BioCyc:CBUR227377:GJ7S-735-MONOMER Uniprot:Q83DJ2
Length = 195
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 86/174 (49%), Positives = 125/174 (71%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ R+IFL QV+D A+ I+Q+LFL++E+ KDI L+INSPGG+VT+ M IY
Sbjct: 20 DIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIY 79
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DV T+C+G AAS GA LLA G+KGKR+C+P++ VMIHQ LG G+ TD+ I
Sbjct: 80 DTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQI 139
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDD 260
++ +LN+IL++ TGK ++++E DT+RD F+ EA EYGL+D++ +
Sbjct: 140 HAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKE 193
>TIGR_CMR|ECH_0901 [details] [associations]
symbol:ECH_0901 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
ProtClustDB:PRK00277 RefSeq:YP_507695.1 ProteinModelPortal:Q2GFT8
SMR:Q2GFT8 STRING:Q2GFT8 GeneID:3928015 KEGG:ech:ECH_0901
PATRIC:20577202 OMA:RDPVEIF BioCyc:ECHA205920:GJNR-904-MONOMER
Uniprot:Q2GFT8
Length = 199
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/173 (48%), Positives = 125/173 (72%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RIIF+ ++D A I++QL+FL++E+ +K+I ++INSPGG VTAG+ IY
Sbjct: 19 DIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEICMYINSPGGVVTAGLSIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K VST+CLG AASMG+ LLAAG G RY +PN+R+MIHQP G G+ATD+ I
Sbjct: 79 DTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMIHQPSGGFQGQATDIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+E+ K +LN I + TG+ + ++ + +RDNFM A +AK++G++D VI+
Sbjct: 139 HAKEILDIKGRLNDIYVKHTGRDLSEVVANMERDNFMRAEKAKDFGIIDKVIE 191
>TIGR_CMR|NSE_0752 [details] [associations]
symbol:NSE_0752 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000237
GenomeReviews:CP000237_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_506627.1 ProteinModelPortal:Q2GD19 SMR:Q2GD19
STRING:Q2GD19 GeneID:3931620 KEGG:nse:NSE_0752 PATRIC:22681509
ProtClustDB:CLSK2527690 BioCyc:NSEN222891:GHFU-763-MONOMER
Uniprot:Q2GD19
Length = 201
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 82/183 (44%), Positives = 127/183 (69%)
Query: 81 PKFEEL-DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSV 139
P+ E D + LL++R++FL ++D A I++QLLFL+AE+ KDI ++INSPGG V
Sbjct: 12 PRGERAYDIFSRLLKERVVFLTGPIEDGMASLIVAQLLFLEAENPDKDIFMYINSPGGVV 71
Query: 140 TAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGG 199
TAG+ IYD M+ K VST+C+G AAS + +LA+G++GKR+ +P++RVM+HQP G G
Sbjct: 72 TAGLSIYDTMQYIKPSVSTVCVGQAASAASLILASGAEGKRFALPHSRVMVHQPSGGVRG 131
Query: 200 KATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+ATDM I ++E+ K +N+I + TG+ +++IE +RD F+ EAK+ G++D +I
Sbjct: 132 QATDMEIHVKEILQLKRMINEIYQKHTGETIKKIETLLERDTFLSPEEAKKVGIIDDIIT 191
Query: 260 DGK 262
K
Sbjct: 192 QRK 194
>MGI|MGI:1858213 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISA] [GO:0008233 "peptidase
activity" evidence=ISA] [GO:0008236 "serine-type peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 MGI:MGI:1858213
GO:GO:0005739 GO:GO:0005524 GO:GO:0005759 GO:GO:0004252
GO:GO:0006515 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA BRENDA:3.4.21.92 MEROPS:S14.003 CTD:8192
HOVERGEN:HBG001689 OrthoDB:EOG46T32D EMBL:AJ005253 EMBL:AJ012249
EMBL:AJ012250 EMBL:AJ012251 EMBL:AJ012252 EMBL:AJ012253
EMBL:AK004024 EMBL:AK145765 EMBL:AK168053 EMBL:BC001998
IPI:IPI00133270 RefSeq:NP_059089.1 UniGene:Mm.287892
ProteinModelPortal:O88696 SMR:O88696 STRING:O88696
PhosphoSite:O88696 REPRODUCTION-2DPAGE:IPI00133270
REPRODUCTION-2DPAGE:O88696 PaxDb:O88696 PRIDE:O88696
Ensembl:ENSMUST00000002735 GeneID:53895 KEGG:mmu:53895
UCSC:uc008ddm.2 InParanoid:O88696 NextBio:310791 Bgee:O88696
Genevestigator:O88696 GermOnline:ENSMUSG00000002660 Uniprot:O88696
Length = 272
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RI+ + +DD A +I+QLLFL +E +KK I ++INSPGG VTAG+ IY
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIY 129
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + T C+G AASMG+ LLAAGS G R+ +PN+R+MIHQP G A G+ATD++I
Sbjct: 130 DTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAI 189
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI----DDGK 262
+ E+ K +L I ++ T + +Q IE +RD +M EA+E+G++D V+ DG+
Sbjct: 190 QAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGE 249
Query: 263 --PGLVAPTSEAIP--PPKP 278
P LV + P PP P
Sbjct: 250 DEPELVQKETATAPTDPPAP 269
>UNIPROTKB|P63783 [details] [associations]
symbol:clpP2 "ATP-dependent Clp protease proteolytic
subunit 2" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006508 GO:GO:0004252 EMBL:BX842579 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
BRENDA:3.4.21.92 PIR:C70865 RefSeq:NP_216976.1 RefSeq:NP_337021.1
RefSeq:YP_006515897.1 ProteinModelPortal:P63783 SMR:P63783
IntAct:P63783 MEROPS:S14.009 PRIDE:P63783
EnsemblBacteria:EBMYCT00000002187 EnsemblBacteria:EBMYCT00000071970
GeneID:13319170 GeneID:888174 GeneID:925797 KEGG:mtc:MT2535
KEGG:mtu:Rv2460c KEGG:mtv:RVBD_2460c PATRIC:18127328
TubercuList:Rv2460c OMA:IQGQVSD ProtClustDB:PRK12553 Uniprot:P63783
Length = 214
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 85/178 (47%), Positives = 119/178 (66%)
Query: 84 EELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGM 143
+E + N L +RIIFLG QVDD +A+ I++QLL L++ D +DI ++INSPGG T+ M
Sbjct: 28 KESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLM 87
Query: 144 GIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPL--GTAGGKA 201
IYD M+ +AD+ T+CLG AAS A LLAAG+ GKR +PNARV+IHQP G G+
Sbjct: 88 AIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQF 147
Query: 202 TDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+D+ I+ E+ + + L+R TGK I DTDRD + A EAK+YG++D V++
Sbjct: 148 SDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLE 205
>RGD|1588583 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] NCBI:XP_001055676 REFSEQ:XM_001055676
Length = 272
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RI+ + +DD A +I+QLLFL +E +KK I ++INSPGG VTAG+ IY
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIY 129
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + T C+G AASMG+ LLAAGS G R+ +PN+R+MIHQP G A G+ATD++I
Sbjct: 130 DTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAI 189
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI----DDGK 262
+ E+ K +L I ++ T + +Q IE +RD +M EA+E+G++D V+ DG+
Sbjct: 190 QAEEIMKLKRQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGE 249
Query: 263 --PGLVAPTSEAIP--PPKP 278
P LV + P PP P
Sbjct: 250 DEPELVQKETTTAPADPPAP 269
>WB|WBGene00014172 [details] [associations]
symbol:clpp-1 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0006508 GO:GO:0010171
GO:GO:0040017 GO:GO:0040018 GO:GO:0004252 GO:GO:0040035
GO:GO:0030163 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
InterPro:IPR023562 PANTHER:PTHR10381 EMBL:Z49073 PIR:C88288
RefSeq:NP_001254239.1 RefSeq:NP_001254240.1 RefSeq:NP_001254241.1
ProteinModelPortal:Q27539 SMR:Q27539 STRING:Q27539 PaxDb:Q27539
EnsemblMetazoa:ZK970.2d GeneID:174594 KEGG:cel:CELE_ZK970.2
CTD:174594 WormBase:ZK970.2a WormBase:ZK970.2b WormBase:ZK970.2d
GeneTree:ENSGT00390000005830 InParanoid:Q27539 OMA:LVHPPQA
BRENDA:3.4.21.92 NextBio:884698 Uniprot:Q27539
Length = 221
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 85/171 (49%), Positives = 114/171 (66%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR RI+ L + VDD A +I+QLLFL +E KK I ++INSPGGSVTAG+ IY
Sbjct: 41 DIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMYINSPGGSVTAGLAIY 100
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D +++ A VST +G A+SMG+ LL AG KG R +PN+R+M+HQP G A G +D+ I
Sbjct: 101 DTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDIVI 160
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
R E++ K +LN+I TG +IE DRD FM A EA ++GLVD +
Sbjct: 161 RAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKFGLVDQI 211
>ZFIN|ZDB-GENE-030131-7860 [details] [associations]
symbol:clpp "ClpP caseinolytic peptidase,
ATP-dependent, proteolytic subunit homolog (E. coli)" species:7955
"Danio rerio" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
ZFIN:ZDB-GENE-030131-7860 GO:GO:0006508 GO:GO:0004252 EMBL:BX649502
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HOVERGEN:HBG001689 IPI:IPI00481150
UniGene:Dr.76726 SMR:Q5PNM4 Ensembl:ENSDART00000006604
Ensembl:ENSDART00000131951 InParanoid:Q5PNM4 Uniprot:Q5PNM4
Length = 266
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 80/172 (46%), Positives = 120/172 (69%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RII + +DD A +I+QLLFL +E + K I ++INSPGG VT+G+ IY
Sbjct: 45 DIYSRLLRERIICVMGPIDDSVASLVIAQLLFLQSESNNKPIHMYINSPGGVVTSGLAIY 104
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ +ST C+G AASMG+ LLAAG+ G R+ +PNAR+M+HQP G A G+ATD++I
Sbjct: 105 DTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHSLPNARIMVHQPSGGARGQATDIAI 164
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ E+ K ++N I S+ TG+ ++ IE +RD +M EA+++G++D V+
Sbjct: 165 QAEEILKLKRQINNIYSKHTGQLLETIESVMERDRYMSPMEAQDFGIIDKVL 216
>UNIPROTKB|Q16740 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008233 "peptidase
activity" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 GO:GO:0005759 GO:GO:0006508 GO:GO:0004252
GO:GO:0008233 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA BRENDA:3.4.21.92
MEROPS:S14.003 CTD:8192 HOVERGEN:HBG001689 OrthoDB:EOG46T32D
EMBL:Z50853 EMBL:AK311973 EMBL:BC002956 IPI:IPI00003870 PIR:S68421
RefSeq:NP_006003.1 UniGene:Hs.515092 PDB:1TG6 PDBsum:1TG6
ProteinModelPortal:Q16740 SMR:Q16740 DIP:DIP-50384N IntAct:Q16740
STRING:Q16740 PhosphoSite:Q16740 DMDM:3023512 PaxDb:Q16740
PeptideAtlas:Q16740 PRIDE:Q16740 DNASU:8192 Ensembl:ENST00000245816
GeneID:8192 KEGG:hsa:8192 UCSC:uc002mem.1 GeneCards:GC19P006315
HGNC:HGNC:2084 HPA:HPA010649 MIM:601119 neXtProt:NX_Q16740
PharmGKB:PA26610 InParanoid:Q16740 PhylomeDB:Q16740
EvolutionaryTrace:Q16740 GenomeRNAi:8192 NextBio:30886
ArrayExpress:Q16740 Bgee:Q16740 CleanEx:HS_CLPP
Genevestigator:Q16740 GermOnline:ENSG00000125656 Uniprot:Q16740
Length = 277
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 89/199 (44%), Positives = 129/199 (64%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RI+ + +DD A +I+QLLFL +E +KK I ++INSPGG VTAG+ IY
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIY 133
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + T C+G AASMG+ LLAAG+ G R+ +PN+R+MIHQP G A G+ATD++I
Sbjct: 134 DTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAI 193
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI----DDGK 262
+ E+ K +L I ++ T + +Q IE +RD +M EA+E+G++D V+ DG+
Sbjct: 194 QAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGE 253
Query: 263 --PGLVAPTS-EAIPPPKP 278
P LV EA P +P
Sbjct: 254 DEPTLVQKEPVEAAPAAEP 272
>TAIR|locus:2178282 [details] [associations]
symbol:NCLPP7 "nuclear-encoded CLP protease P7"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009840
"chloroplastic endopeptidase Clp complex" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
GO:GO:0006508 EMBL:AB006708 GO:GO:0004252 GO:GO:0050897
GO:GO:0009535 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA EMBL:AK118523
EMBL:BT005261 IPI:IPI00533430 RefSeq:NP_568427.1 UniGene:At.31024
PDB:1R8V PDBsum:1R8V ProteinModelPortal:Q9FN42 SMR:Q9FN42
STRING:Q9FN42 MEROPS:S14.A02 PaxDb:Q9FN42 PRIDE:Q9FN42
EnsemblPlants:AT5G23140.1 GeneID:832378 KEGG:ath:AT5G23140
GeneFarm:805 TAIR:At5g23140 InParanoid:Q9FN42 PhylomeDB:Q9FN42
ProtClustDB:CLSN2917700 Genevestigator:Q9FN42 GO:GO:0009840
Uniprot:Q9FN42
Length = 241
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 78/174 (44%), Positives = 122/174 (70%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RII + ++D T+ +++QLL+L++E+ K I +++NSPGG VTAG+ IY
Sbjct: 48 DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ ++ +STICLG AASM + LLAAG+KG+R +PNA VMIHQP G G+A D++I
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDD 260
+++ LN++ + TG+P+ + + DRD+FM EAK +G++D VID+
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221
>GENEDB_PFALCIPARUM|PFC0310c [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease,
putative" species:5833 "Plasmodium falciparum" [GO:0030163 "protein
catabolic process" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 GO:GO:0030163 EMBL:AL844502 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0020011
RefSeq:XP_001351149.1 PDB:2F6I PDBsum:2F6I
ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/177 (46%), Positives = 116/177 (65%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D ++RII+L +++ TAD +ISQLL+LD + DI+++INSPGGS+ G+ I
Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLD-NINHNDIKIYINSPGGSINEGLAIL 244
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D K+D+ TI GL ASM + +LA+G KGKR +PN R+MIHQPLG A G D+ I
Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 304
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKP 263
+ +E+ Y K L LS T + V+ IE D+DRD +M+A EAK+YG++D VI+ P
Sbjct: 305 QTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETKLP 361
>UNIPROTKB|O97252 [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
GO:GO:0030163 EMBL:AL844502 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001351149.1 PDB:2F6I
PDBsum:2F6I ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/177 (46%), Positives = 116/177 (65%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D ++RII+L +++ TAD +ISQLL+LD + DI+++INSPGGS+ G+ I
Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLD-NINHNDIKIYINSPGGSINEGLAIL 244
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D K+D+ TI GL ASM + +LA+G KGKR +PN R+MIHQPLG A G D+ I
Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 304
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKP 263
+ +E+ Y K L LS T + V+ IE D+DRD +M+A EAK+YG++D VI+ P
Sbjct: 305 QTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETKLP 361
>UNIPROTKB|Q2KHU4 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005759 GO:GO:0006508 GO:GO:0004252 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:BC112880
IPI:IPI00700802 RefSeq:NP_001039879.1 UniGene:Bt.54443 HSSP:P0A6G7
ProteinModelPortal:Q2KHU4 SMR:Q2KHU4 STRING:Q2KHU4 MEROPS:S14.003
PRIDE:Q2KHU4 Ensembl:ENSBTAT00000019577 GeneID:535981
KEGG:bta:535981 CTD:8192 HOVERGEN:HBG001689 InParanoid:Q2KHU4
OrthoDB:EOG46T32D NextBio:20876866 Uniprot:Q2KHU4
Length = 272
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/200 (43%), Positives = 127/200 (63%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RI+ + +DD A +I+QLLFL +E +KK I ++INSPGG VT+G+ IY
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTSGLAIY 129
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + T C+G AASMG+ LLAAG+ G R+ +PN+R+MIHQP G A G+ATD++I
Sbjct: 130 DTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAI 189
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI----DDGK 262
+ E+ K +L I ++ T + +Q IE +RD +M EA+E+G++D V+ DG+
Sbjct: 190 QAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGE 249
Query: 263 --PGLVA--PTSEAIPPPKP 278
P LV P P P
Sbjct: 250 DEPELVQKEPGEPTAVEPAP 269
>UNIPROTKB|E2QUV8 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9615 "Canis lupus familiaris" [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562
PANTHER:PTHR10381 GeneTree:ENSGT00390000005830 EMBL:AAEX03012495
Ensembl:ENSCAFT00000029683 OMA:NEESAME NextBio:20897274
Uniprot:E2QUV8
Length = 301
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 85/193 (44%), Positives = 126/193 (65%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RI+ + +DD A +I+QLLFL +E +KK I ++INSPGG VT+G+ IY
Sbjct: 98 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGMVTSGLAIY 157
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + T C+G AASMG+ LLAAG+ G R+ +PN+R+MIHQP G A G+ATD++I
Sbjct: 158 DTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAI 217
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI----DDGK 262
+ E+ K +L I ++ T + +Q IE +RD +M EA+E+G++D V+ DG+
Sbjct: 218 QAEEIMKLKKQLYGIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGE 277
Query: 263 --PGLVAPTSEAI 273
P LV A+
Sbjct: 278 DEPELVQKEPMAV 290
>UNIPROTKB|F1SBT2 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9823 "Sus scrofa" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:CU929921
EMBL:AEMK01192585 EMBL:FP312741 Ensembl:ENSSSCT00000014789
Uniprot:F1SBT2
Length = 273
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 78/172 (45%), Positives = 117/172 (68%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LLR+RI+ + +DD A +I+QLLFL +E +KK I ++INSPGG VT+G+ IY
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTSGLAIY 129
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + T C+G AASMG+ LLAAG+ G R+ +PN+R+MIHQP G A G+ATD++I
Sbjct: 130 DTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAI 189
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ E+ K +L I ++ T + +Q I +RD +M EA+E+G++D V+
Sbjct: 190 QAEEIMKLKKQLYSIYAKHTKQSLQVIVKAMERDRYMSPMEAQEFGILDKVL 241
>TIGR_CMR|SPO_1003 [details] [associations]
symbol:SPO_1003 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009368
"endopeptidase Clp complex" evidence=ISS] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA
ProtClustDB:PRK00277 RefSeq:YP_166255.1 ProteinModelPortal:Q5LUQ0
SMR:Q5LUQ0 GeneID:3193881 KEGG:sil:SPO1003 PATRIC:23375299
Uniprot:Q5LUQ0
Length = 209
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 78/178 (43%), Positives = 115/178 (64%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RIIF+ + D + I++QLL L+AE+ K+I ++INSPGG VT+G+ IY
Sbjct: 28 DIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAENPNKEISIYINSPGGVVTSGLSIY 87
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K ST+ +G AASMG+ LLA G KG R+ +PN+R+M+HQP G G+A+D+ I
Sbjct: 88 DTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIMVHQPSGGYQGQASDIMI 147
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPG 264
E K +L I + TG+ + +E DRDNFM EAKE+G +D +++ G
Sbjct: 148 HAAETQKLKDRLYDIYVKHTGQTKKAVEKALDRDNFMSPEEAKEWGHIDEIVESRSKG 205
>FB|FBgn0032229 [details] [associations]
symbol:CG5045 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:AE014134 GO:GO:0006508 GO:GO:0004252 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HSSP:P19245 EMBL:AY119497 EMBL:FM245207
RefSeq:NP_609388.1 UniGene:Dm.11171 SMR:Q9VKY3 MINT:MINT-974885
STRING:Q9VKY3 EnsemblMetazoa:FBtr0080000 EnsemblMetazoa:FBtr0332189
GeneID:34402 KEGG:dme:Dmel_CG5045 UCSC:CG5045-RA
FlyBase:FBgn0032229 InParanoid:Q9VKY3 OrthoDB:EOG4VHHP8
GenomeRNAi:34402 NextBio:788329 Uniprot:Q9VKY3
Length = 253
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 83/187 (44%), Positives = 120/187 (64%)
Query: 87 DTTNMLLRQRIIFL-GSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LL++RII L G+ DD+++ +++QLLFL +E+ K I L+INSPGG VTAG+ I
Sbjct: 45 DIFSRLLKERIICLMGNITDDISST-VVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAI 103
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ K ++T C+G A SMG+ LLAAG+ G RY +PNAR+MIHQP G A G+ATD+
Sbjct: 104 YDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDIL 163
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPGL 265
I E+ K +L I + +++ +RD+FM EAK G++D V++ P
Sbjct: 164 IHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMERDHFMTPEEAKVLGIIDHVLEH-PPET 222
Query: 266 VAPTSEA 272
V+ T A
Sbjct: 223 VSETGPA 229
>UNIPROTKB|G4MLM6 [details] [associations]
symbol:MGG_06757 "ATP-dependent Clp protease proteolytic
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:CM001231
MEROPS:S14.001 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:XP_003709471.1 ProteinModelPortal:G4MLM6
EnsemblFungi:MGG_06757T0 GeneID:2684930 KEGG:mgr:MGG_06757
Uniprot:G4MLM6
Length = 274
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 71/193 (36%), Positives = 123/193 (63%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+ L +DD T + +QLL+L+ + K I L+INSPGG V++G+ IY
Sbjct: 64 DIFSKLLQERIVCLNGPIDDWTQASVTAQLLWLEQDSPHKPITLYINSPGGQVSSGLAIY 123
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M + V T+C+G+AASMGA LL G+ G+RY +P++++M+HQPLG+ G+A+D+ I
Sbjct: 124 DTMNYISSPVHTVCVGMAASMGAILLLGGAAGQRYALPHSQIMVHQPLGSTQGQASDIII 183
Query: 207 RIREMSYHKVKLNKILSR----ATGKP---VQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
++++ + ++N I+ R A G+ Q+++ +RD ++ A EA E G+VD ++
Sbjct: 184 YAKQITRIRSQINDIMRRHLNTAAGRERFAAQEVDEMMERDKYLTADEAVELGIVDKILT 243
Query: 260 DGKPGLVAPTSEA 272
+ + ++A
Sbjct: 244 SRSDAVASALNDA 256
>UNIPROTKB|P0C312 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4530 "Oryza sativa" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0006508 GO:GO:0004252
EMBL:AY522331 GO:GO:0009535 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProteinModelPortal:P0C312
Gramene:P0C312 Genevestigator:P0C312 Uniprot:P0C312
Length = 216
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 77/190 (40%), Positives = 113/190 (59%)
Query: 78 PY-LPKFEE---LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFIN 133
PY +P EE +D N++ R+R +FLG ++ + I +++L ED DI LFIN
Sbjct: 9 PYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFIN 68
Query: 134 SPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQP 193
SPGG + +GM I+D M+ D+ TICLG+AASM +F+L G KR P+AR+M+HQP
Sbjct: 69 SPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
Query: 194 LGTA-GGKATDMSIRIREMSYHKVK--LNKILSRATGKPVQQIELDTDRDNFMDAWEAKE 250
+ + + + E+ HKV+ + ++ + TGKP + D +RD FM A EAK
Sbjct: 129 ASAYYRARTPEFLLEVEEL--HKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKA 186
Query: 251 YGLVDAVIDD 260
YGLVD V D+
Sbjct: 187 YGLVDIVGDE 196
>UNIPROTKB|P0C313 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39946 "Oryza sativa Indica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:AY522329 GO:GO:0009535 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProtClustDB:CHL00028
RefSeq:YP_654230.1 ProteinModelPortal:P0C313 GeneID:4126873
Gramene:P0C313 Uniprot:P0C313
Length = 216
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 77/190 (40%), Positives = 113/190 (59%)
Query: 78 PY-LPKFEE---LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFIN 133
PY +P EE +D N++ R+R +FLG ++ + I +++L ED DI LFIN
Sbjct: 9 PYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFIN 68
Query: 134 SPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQP 193
SPGG + +GM I+D M+ D+ TICLG+AASM +F+L G KR P+AR+M+HQP
Sbjct: 69 SPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
Query: 194 LGTA-GGKATDMSIRIREMSYHKVK--LNKILSRATGKPVQQIELDTDRDNFMDAWEAKE 250
+ + + + E+ HKV+ + ++ + TGKP + D +RD FM A EAK
Sbjct: 129 ASAYYRARTPEFLLEVEEL--HKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKA 186
Query: 251 YGLVDAVIDD 260
YGLVD V D+
Sbjct: 187 YGLVDIVGDE 196
>UNIPROTKB|P0C314 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
GO:GO:0009535 eggNOG:COG0740 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 MEROPS:S14.002 ProtClustDB:CHL00028
PIR:JQ0251 RefSeq:NP_039410.1 ProteinModelPortal:P0C314
STRING:P0C314 GeneID:3131474 KEGG:osa:3131474 Gramene:P0C314
Uniprot:P0C314
Length = 216
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 77/190 (40%), Positives = 113/190 (59%)
Query: 78 PY-LPKFEE---LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFIN 133
PY +P EE +D N++ R+R +FLG ++ + I +++L ED DI LFIN
Sbjct: 9 PYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFIN 68
Query: 134 SPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQP 193
SPGG + +GM I+D M+ D+ TICLG+AASM +F+L G KR P+AR+M+HQP
Sbjct: 69 SPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
Query: 194 LGTA-GGKATDMSIRIREMSYHKVK--LNKILSRATGKPVQQIELDTDRDNFMDAWEAKE 250
+ + + + E+ HKV+ + ++ + TGKP + D +RD FM A EAK
Sbjct: 129 ASAYYRARTPEFLLEVEEL--HKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKA 186
Query: 251 YGLVDAVIDD 260
YGLVD V D+
Sbjct: 187 YGLVDIVGDE 196
>UNIPROTKB|Q6ENE9 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4536 "Oryza nivara" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0009570 GO:GO:0006508
GO:GO:0004252 EMBL:AP006728 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_052774.1 ProteinModelPortal:Q6ENE9 MEROPS:S14.002
GeneID:2885922 Gramene:Q6ENE9 ProtClustDB:CHL00028 Uniprot:Q6ENE9
Length = 216
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 77/190 (40%), Positives = 113/190 (59%)
Query: 78 PY-LPKFEE---LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFIN 133
PY +P EE +D N++ R+R +FLG ++ + I +++L ED DI LFIN
Sbjct: 9 PYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFIN 68
Query: 134 SPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQP 193
SPGG + +GM I+D M+ D+ TICLG+AASM +F+L G KR P+AR+M+HQP
Sbjct: 69 SPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
Query: 194 LGTA-GGKATDMSIRIREMSYHKVK--LNKILSRATGKPVQQIELDTDRDNFMDAWEAKE 250
+ + + + E+ HKV+ + ++ + TGKP + D +RD FM A EAK
Sbjct: 129 ASAYYRARTPEFLLEVEEL--HKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKA 186
Query: 251 YGLVDAVIDD 260
YGLVD V D+
Sbjct: 187 YGLVDIVGDE 196
>UNIPROTKB|Q6E6T0 [details] [associations]
symbol:Q6E6T0 "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574
GO:GO:0009536 GO:GO:0006508 GO:GO:0004252 GO:GO:0009535
HOGENOM:HOG000285833 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AY538587 ProteinModelPortal:Q6E6T0 STRING:Q6E6T0
Gramene:Q6E6T0 Uniprot:Q6E6T0
Length = 209
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 76/190 (40%), Positives = 112/190 (58%)
Query: 78 PY-LPKFEE---LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFIN 133
PY +P EE +D N++ R+R +FLG ++ + I +++L ED DI LFIN
Sbjct: 2 PYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFIN 61
Query: 134 SPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQP 193
SPGG + +GM I+D M+ D+ ICLG+AASM +F+L G KR P+AR+M+HQP
Sbjct: 62 SPGGWLISGMAIFDTMQTVTPDIYAICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 121
Query: 194 LGTA-GGKATDMSIRIREMSYHKVK--LNKILSRATGKPVQQIELDTDRDNFMDAWEAKE 250
+ + + + E+ HKV+ + ++ + TGKP + D +RD FM A EAK
Sbjct: 122 ASAYYRARTPEFLLEVEEL--HKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKA 179
Query: 251 YGLVDAVIDD 260
YGLVD V D+
Sbjct: 180 YGLVDIVGDE 189
>TAIR|locus:2034625 [details] [associations]
symbol:CLP2 "CLP protease proteolytic subunit 2"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0009534 GO:GO:0010287
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022327 EMBL:AC025416
EMBL:AY057617 EMBL:AY062770 EMBL:AY081641 IPI:IPI00516669
PIR:T52454 RefSeq:NP_563907.1 UniGene:At.20902 PDB:1R97 PDBsum:1R97
ProteinModelPortal:Q9XJ36 SMR:Q9XJ36 IntAct:Q9XJ36 STRING:Q9XJ36
PaxDb:Q9XJ36 PRIDE:Q9XJ36 ProMEX:Q9XJ36 EnsemblPlants:AT1G12410.1
GeneID:837797 KEGG:ath:AT1G12410 GeneFarm:808 TAIR:At1g12410
InParanoid:Q9XJ36 OMA:IWNALYR PhylomeDB:Q9XJ36
ProtClustDB:CLSN2687781 Genevestigator:Q9XJ36 Uniprot:Q9XJ36
Length = 279
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 67/173 (38%), Positives = 108/173 (62%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
+D N L R+R+IF+G +D+ ++ I++ +L+LD D + I +++N PGG +T + I
Sbjct: 88 VDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAI 147
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD MK K+ V T C+GLA ++ FLLAAG KG R+ MP +R+ + P G A G+A D+
Sbjct: 148 YDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQ 207
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+E+S + L L++ TG+P +++ D R +A EA EYGL+D ++
Sbjct: 208 NEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260
>TAIR|locus:2130449 [details] [associations]
symbol:CLPR4 "CLP protease R subunit 4" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0000302 "response to reactive oxygen species" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004252 GO:GO:0000302
GO:GO:0010468 EMBL:Z97342 EMBL:AL161545 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
EMBL:AK117499 EMBL:AY081275 EMBL:BT000050 EMBL:AY087492
IPI:IPI00525806 PIR:G71438 RefSeq:NP_567521.1 UniGene:At.19677
PDB:1R99 PDBsum:1R99 ProteinModelPortal:Q8LB10 SMR:Q8LB10
IntAct:Q8LB10 STRING:Q8LB10 PaxDb:Q8LB10 PRIDE:Q8LB10 ProMEX:Q8LB10
EnsemblPlants:AT4G17040.1 GeneID:827412 KEGG:ath:AT4G17040
GeneFarm:809 TAIR:At4g17040 InParanoid:Q8LB10 OMA:YFSPSEA
PhylomeDB:Q8LB10 ProtClustDB:CLSN2689477 Genevestigator:Q8LB10
Uniprot:Q8LB10
Length = 305
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 65/180 (36%), Positives = 100/180 (55%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPG--------GS 138
D + L + RI++LG + + I+++ L+L ED +K I L+INS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 139 VTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAG 198
T IYD M K + T+C+G A A LL AG+KG R +P++ +MI QP+
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224
Query: 199 GKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
G+ATD+ I +E+ + K ++ K+ S+ GK +QIE D R + EA EYG++D V+
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284
>TAIR|locus:2031070 [details] [associations]
symbol:CLPR1 "CLP protease proteolytic subunit 1"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009532 "plastid
stroma" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC015445 eggNOG:COG0740
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022330
EMBL:AY045677 EMBL:BT000572 IPI:IPI00529610 PIR:T52451
RefSeq:NP_564560.1 UniGene:At.23793 UniGene:At.75198 PDB:1R96
PDBsum:1R96 ProteinModelPortal:Q9XJ35 SMR:Q9XJ35 IntAct:Q9XJ35
STRING:Q9XJ35 PaxDb:Q9XJ35 PRIDE:Q9XJ35 EnsemblPlants:AT1G49970.1
GeneID:841420 KEGG:ath:AT1G49970 GeneFarm:810 TAIR:At1g49970
HOGENOM:HOG000006365 InParanoid:Q9XJ35 OMA:AIDMWIK PhylomeDB:Q9XJ35
ProtClustDB:CLSN2688619 Genevestigator:Q9XJ35 Uniprot:Q9XJ35
Length = 387
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 61/189 (32%), Positives = 99/189 (52%)
Query: 81 PKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPG---- 136
P+ D ++LL RI +LG + + +++Q ++LD ++ K I L+INSPG
Sbjct: 165 PRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNE 224
Query: 137 -----GSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIH 191
GS T I D + CK+DV TI G+A A LL+ G KG R P++ ++
Sbjct: 225 KMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLY 284
Query: 192 QP-LGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKE 250
P + + G A DM I+ +E+ + ++L++ TGK +QI D R ++ A A +
Sbjct: 285 LPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAID 344
Query: 251 YGLVDAVID 259
YG+ D + D
Sbjct: 345 YGIADKIAD 353
>GENEDB_PFALCIPARUM|PF14_0348 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease
proteolytic subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0020011 "apicoplast" evidence=ISS] InterPro:IPR001907
PRINTS:PR00127 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
EMBL:AE014187 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2
PDBsum:4HNK HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 68/232 (29%), Positives = 117/232 (50%)
Query: 46 CIKAANSSPSIAQ-TLSTNW-DVSNFAVNNNTSSPYLPKFEE-----LDTTNMLLRQRII 98
CI + I + TN ++ + NN SP + E ++ ++LL +RII
Sbjct: 11 CINFCKCTKIITRYNFITNKINIKRYKKKNNNKSPLYYSYNEHHKYNINIPSLLLSKRII 70
Query: 99 FLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPG----------GSVTAGMGIYDA 148
FL S + ++ IISQLL+L+ E +K I L+INS G +T + I D
Sbjct: 71 FLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDV 130
Query: 149 MKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAG-GKATDMSIR 207
+ +DV T CLG A + L ++G KG R+ + N+ ++Q +AT++ I+
Sbjct: 131 INYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQ 190
Query: 208 IREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+E+ K K+ +I+S+ T K I +RD + +A EA ++ L+D +++
Sbjct: 191 NKEIMNTKKKVIEIISKNTEKDTNVISNVLERDKYFNADEAVDFKLIDHILE 242
>UNIPROTKB|Q8IL98 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease proteolytic
subunit" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:AE014187
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2 PDBsum:4HNK
HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 68/232 (29%), Positives = 117/232 (50%)
Query: 46 CIKAANSSPSIAQ-TLSTNW-DVSNFAVNNNTSSPYLPKFEE-----LDTTNMLLRQRII 98
CI + I + TN ++ + NN SP + E ++ ++LL +RII
Sbjct: 11 CINFCKCTKIITRYNFITNKINIKRYKKKNNNKSPLYYSYNEHHKYNINIPSLLLSKRII 70
Query: 99 FLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPG----------GSVTAGMGIYDA 148
FL S + ++ IISQLL+L+ E +K I L+INS G +T + I D
Sbjct: 71 FLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDV 130
Query: 149 MKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAG-GKATDMSIR 207
+ +DV T CLG A + L ++G KG R+ + N+ ++Q +AT++ I+
Sbjct: 131 INYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQ 190
Query: 208 IREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+E+ K K+ +I+S+ T K I +RD + +A EA ++ L+D +++
Sbjct: 191 NKEIMNTKKKVIEIISKNTEKDTNVISNVLERDKYFNADEAVDFKLIDHILE 242
>TIGR_CMR|DET_1086 [details] [associations]
symbol:DET_1086 "ATP-dependent Clp protease, proteolytic
subunit ClpP, putative" species:243164 "Dehalococcoides ethenogenes
195" [GO:0009368 "endopeptidase Clp complex" evidence=ISS]
InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0740 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_181801.1 ProteinModelPortal:Q3Z7J8 STRING:Q3Z7J8
GeneID:3229625 KEGG:det:DET1086 PATRIC:21609213
HOGENOM:HOG000232515 OMA:GDITVWI ProtClustDB:CLSK925866
BioCyc:DETH243164:GJNF-1087-MONOMER Uniprot:Q3Z7J8
Length = 242
Score = 158 (60.7 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 50/166 (30%), Positives = 77/166 (46%)
Query: 96 RIIFLGSQVDDLT--ADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCK 153
R ++L ++ D T D + QL + +I L+INSPGG V A IY+ +
Sbjct: 21 RTLYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGDVFAAAQIYNMLMDYP 80
Query: 154 ADVSTICLGLAASMGAFLLAAGSKGKRYCM-PNARVMIHQPLGTAGGKATDMSIRIREMS 212
DV+ LAAS + + AG+K CM P A +MIH P A G +M I ++
Sbjct: 81 HDVTVKIDALAASAASVIAMAGTK---VCMSPVAMMMIHNPATIAIGDTEEMQKAIDMLN 137
Query: 213 YHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
K + +G +I D + +M+A EA + G D ++
Sbjct: 138 EVKESIMNAYEIKSGLSRHKISQLMDAETWMNAKEAVKLGFADEIL 183
>TIGR_CMR|SO_2964 [details] [associations]
symbol:SO_2964 "ClpP protease family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR023562 PANTHER:PTHR10381 RefSeq:NP_718533.1
ProteinModelPortal:Q8ED07 GeneID:1170652 KEGG:son:SO_2964
PATRIC:23525568 HOGENOM:HOG000138775 OMA:NSPGGDF
ProtClustDB:CLSK865009 Uniprot:Q8ED07
Length = 284
Score = 138 (53.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 124 SKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCM 183
++KD+ ++INSPGG + G+ IY+ ++ K V+T LGLAAS + + AG R+
Sbjct: 68 NEKDVTVYINSPGGDMFEGIAIYNRLREHKGKVTTKVLGLAASAASVIYMAGEDDARFVA 127
Query: 184 PNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFM 243
+A +MIH A G + +M + + G+ + I D + F+
Sbjct: 128 SSAFLMIHNCWVFAIGNRHALRNIADDMEEFDAAMVDLYVEGCGQSEKVIATMMDEETFI 187
Query: 244 DAWEAKEYG 252
+A E G
Sbjct: 188 RGKKAVELG 196
>TIGR_CMR|BA_4092 [details] [associations]
symbol:BA_4092 "prophage LambdaBa02, Clp protease family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006508 GO:GO:0004252
InterPro:IPR023562 PANTHER:PTHR10381 HOGENOM:HOG000232515
RefSeq:NP_846331.1 RefSeq:YP_020737.2 RefSeq:YP_030054.1
ProteinModelPortal:Q81W90 DNASU:1086588
EnsemblBacteria:EBBACT00000008678 EnsemblBacteria:EBBACT00000018702
EnsemblBacteria:EBBACT00000023556 GeneID:1086588 GeneID:2814699
GeneID:2851717 KEGG:ban:BA_4092 KEGG:bar:GBAA_4092 KEGG:bat:BAS3804
OMA:TINLHIN ProtClustDB:CLSK644195
BioCyc:BANT260799:GJAJ-3861-MONOMER
BioCyc:BANT261594:GJ7F-3979-MONOMER Uniprot:Q81W90
Length = 251
Score = 121 (47.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 123 DSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYC 182
D K I L+INSPGGSV M I ++ A + + G+ AS + L K Y
Sbjct: 54 DDIKTINLYINSPGGSVFETMAIIAMLQRHHAKIISYIDGIGASCASVLPMISDKIIMYA 113
Query: 183 MPNARVMIHQPLGTAGGKATDMSIRIREMS-YHKVKLNKILSRATGKPVQQ-IELDTDRD 240
N+ +MIH A G A + ++ ++ + L+RA K + ++ D +
Sbjct: 114 --NSMMMIHNAWTYASGNADQLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAE 171
Query: 241 NFMDAWEAKEYGLVDAVI 258
++ A EA YGL D +I
Sbjct: 172 TWLSAEEAMGYGLCDEII 189
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 329 301 0.00096 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 608 (65 KB)
Total size of DFA: 206 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.28u 0.11s 24.39t Elapsed: 00:00:01
Total cpu time: 24.28u 0.11s 24.39t Elapsed: 00:00:01
Start: Sat May 11 07:22:27 2013 End: Sat May 11 07:22:28 2013