BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020205
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic
OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1
Length = 309
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/269 (72%), Positives = 231/269 (85%), Gaps = 2/269 (0%)
Query: 40 KTRRPTCIKAANS-SPSIAQTLSTNWDVSNFAVNNNTSSP-YLPKFEELDTTNMLLRQRI 97
KT +P C++++ S S QTLS+NWDVS+F++++ SP LP FEELDTTNMLLRQRI
Sbjct: 36 KTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRI 95
Query: 98 IFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVS 157
+FLGSQVDD+TAD +ISQLL LDAEDS++DI LFINSPGGS+TAGMGIYDAMK CKADVS
Sbjct: 96 VFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVS 155
Query: 158 TICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVK 217
T+CLGLAASMGAFLLA+GSKGKRYCMPN++VMIHQPLGTAGGKAT+MSIRIREM YHK+K
Sbjct: 156 TVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIK 215
Query: 218 LNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPGLVAPTSEAIPPPK 277
LNKI SR TGKP +IE DTDRDNF++ WEAKEYGL+DAVIDDGKPGL+AP + PPPK
Sbjct: 216 LNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTPPPK 275
Query: 278 PRVWHMWNIEGSRKAKKKLPSEHNLLQNG 306
+VW +W +EG++K LPSE ++ QNG
Sbjct: 276 TKVWDLWKVEGTKKDNTNLPSERSMTQNG 304
>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=clpP3 PE=3 SV=1
Length = 240
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 138/173 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RI+FLG+ VDD AD I++QLLFL+AED +KDI+L+INSPGGSVTAGM I
Sbjct: 52 FDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAI 111
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ DV+TIC GLAASMGAFLL+ G++GKR +P+AR+MIHQPLG A G+A D+
Sbjct: 112 YDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIE 171
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I+ RE+ YHK LN +L++ TG+P+++IE+DTDRD FM EAK YGL+D V+
Sbjct: 172 IQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224
>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1
Length = 240
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 138/173 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RI+FLG+ VDD AD I++QLLFL+AED +KDI+L+INSPGGSVTAGM I
Sbjct: 52 FDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAI 111
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ DV+TIC GLAASMGAFLL+ G++GKR +P+AR+MIHQPLG A G+A D+
Sbjct: 112 YDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIE 171
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I+ RE+ YHK LN +L++ TG+P+++IE+DTDRD FM EAK YGL+D V+
Sbjct: 172 IQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224
>sp|Q8YXH5|CLPP1_NOSS1 ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP1 PE=3 SV=1
Length = 204
Score = 231 bits (590), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 139/179 (77%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RI+FLG QVD A+ I++QLLFLDAED +KDI L+INSPGGSVTAGMGI
Sbjct: 17 FDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGI 76
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
+D MK + DV TIC GLAASMGAFLL+AG+KGKR +P++R+MIHQPLG A G+ATD+
Sbjct: 77 FDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIE 136
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPG 264
I+ RE+ YHK +LN L+ TG+P+++I DT+RD FM EAK+YGL+D VID G
Sbjct: 137 IQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHAAG 195
>sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3
SV=1
Length = 204
Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 139/179 (77%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RIIFLG QVD A+ I++QLLFLDAED +KDI L+INSPGGSVTAGMGI
Sbjct: 17 FDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGI 76
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
+D MK + DV TIC GLAASMGAFLL+AG+KGKR +P++R+MIHQPLG A G+ATD+
Sbjct: 77 FDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIE 136
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPG 264
I+ RE+ YHK +LN L+ TG+P+++I DT+RD FM EA++YGL+D VID G
Sbjct: 137 IQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHAAG 195
>sp|A7GIH2|CLPP_CLOBL ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=clpP PE=3 SV=1
Length = 194
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 136/176 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L +V+D TA I++QLLFL+AED KDI L+INSPGGS+T+GM IY
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ K KLN ILS TGKP++Q+ELDT+RD+F+ A EAKEYGL+D VID K
Sbjct: 139 HAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194
>sp|B1IND7|CLPP_CLOBK ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Okra / Type B1) GN=clpP PE=3 SV=1
Length = 194
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 136/176 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L +V+D TA I++QLLFL+AED KDI L+INSPGGS+T+GM IY
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ K KLN ILS TGKP++Q+ELDT+RD+F+ A EAKEYGL+D VID K
Sbjct: 139 HAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194
>sp|C1FLA6|CLPP_CLOBJ ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=clpP PE=3 SV=1
Length = 194
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 136/176 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L +V+D TA I++QLLFL+AED KDI L+INSPGGS+T+GM IY
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ K KLN ILS TGKP++Q+ELDT+RD+F+ A EAKEYGL+D VID K
Sbjct: 139 HAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194
>sp|A5I6W1|CLPP_CLOBH ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type
A) GN=clpP PE=3 SV=1
Length = 194
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 136/176 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L +V+D TA I++QLLFL+AED KDI L+INSPGGS+T+GM IY
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ K KLN ILS TGKP++Q+ELDT+RD+F+ A EAKEYGL+D VID K
Sbjct: 139 HAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194
>sp|A7FYI2|CLPP_CLOB1 ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 136/176 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L +V+D TA I++QLLFL+AED KDI L+INSPGGS+T+GM IY
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ K KLN ILS TGKP++Q+ELDT+RD+F+ A EAKEYGL+D VID K
Sbjct: 139 HAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194
>sp|Q8YQX8|CLPP2_NOSS1 ATP-dependent Clp protease proteolytic subunit 2 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP2 PE=3 SV=1
Length = 232
Score = 231 bits (588), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 138/173 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RIIFLG+ +DD A+ I++QLLFLDAEDS+KDI+L+INSPGGSV AGM I
Sbjct: 44 FDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAI 103
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD ++ + DV TIC GLAASMGAFLL AG+KGKR +P++R+MIHQPLG A G+A D+
Sbjct: 104 YDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIE 163
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I+ RE+ Y K +LN++L+ TG+P+++IE DTDRD FM A EAK YGL+D VI
Sbjct: 164 IQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 216
>sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic subunit 1
OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1
PE=3 SV=1
Length = 229
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 137/179 (76%), Gaps = 6/179 (3%)
Query: 86 LDTTNMLLRQRIIFLGSQ------VDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSV 139
D + LLR+RIIFLG +DD AD I++QLLFLDAED +KDI L+INSPGGSV
Sbjct: 43 FDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSV 102
Query: 140 TAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGG 199
TAGM IYD MK + DV T+C GLAASMGAFLL+ G+ GKR +PNAR+MIHQPLG A G
Sbjct: 103 TAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQG 162
Query: 200 KATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+A D+ I+ RE+ YHK KLN++LS+ TG+P+++IE DT+RD FM A EAK YGL+D V+
Sbjct: 163 QAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQVV 221
>sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3
SV=2
Length = 214
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 138/173 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RIIFLG+ +DD A+ I++QLLFLDAEDS+KDI+L+INSPGGSV AGM I
Sbjct: 26 FDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAI 85
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD ++ + DV TIC GLAASMGAFLL AG+KGKR +P++R+MIHQPLG A G+A D+
Sbjct: 86 YDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIE 145
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I+ RE+ Y K +LN++L+ TG+P+++IE DTDRD FM A EAK YGL+D VI
Sbjct: 146 IQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 198
>sp|B1L1D7|CLPP_CLOBM ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=clpP PE=3
SV=1
Length = 194
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 135/176 (76%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII L +V+D TA I++QLLFL+AED KDI L+INSPGGS+T+GM IY
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLL AG+KGKRY +PN+ VMIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEVMIHQPLGGFQGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ K KLN ILS TGKP++Q+ELDT+RD+F+ A EAKEYGL+D VID K
Sbjct: 139 HAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194
>sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas
wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3
SV=1
Length = 200
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 133/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RIIFLGS +DD A+ +I+QLLFL+AED KDI L+INSPGGS+TAGM IY
Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIY 79
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ + DVSTIC+GLAASMGAFLLAAG KGKRY +PNA +MIHQP G G+ATD+ I
Sbjct: 80 DTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEI 139
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
R + K LNKIL+ TG+P+++I+ DTDRD FM A EAKEYG++D VI
Sbjct: 140 HARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVI 191
>sp|B1L812|CLPP_THESQ ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp.
(strain RQ2) GN=clpP PE=3 SV=1
Length = 203
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 134/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RI+FLGS +DD A+ +I+QLLFL+AED KD+ L+INSPGGSVTAG+ IY
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 87
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G AASM A LLAAG+KGKRY +PNAR+MIHQPLG A G A D+ I
Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 147
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
RE+ K LN+ILS+ TG+P+++IE DTDRD FM A EAKEYG+VD V+
Sbjct: 148 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>sp|A5IJ91|CLPP_THEP1 ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
GN=clpP PE=3 SV=1
Length = 203
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 134/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RI+FLGS +DD A+ +I+QLLFL+AED KD+ L+INSPGGSVTAG+ IY
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 87
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G AASM A LLAAG+KGKRY +PNAR+MIHQPLG A G A D+ I
Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 147
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
RE+ K LN+ILS+ TG+P+++IE DTDRD FM A EAKEYG+VD V+
Sbjct: 148 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>sp|Q9WZF9|CLPP_THEMA ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=clpP PE=3 SV=1
Length = 203
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 134/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RI+FLGS +DD A+ +I+QLLFL+AED KD+ L+INSPGGSVTAG+ IY
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 87
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G AASM A LLAAG+KGKRY +PNAR+MIHQPLG A G A D+ I
Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 147
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
RE+ K LN+ILS+ TG+P+++IE DTDRD FM A EAKEYG+VD V+
Sbjct: 148 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>sp|A4ISQ2|CLPP_GEOTN ATP-dependent Clp protease proteolytic subunit OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=clpP PE=3 SV=1
Length = 196
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 138/172 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RIIFLGS +DD A+ I+SQLLFL AED +KDI L+INSPGGS+TAG+ IY
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ VMIHQPLG A G+AT++ I
Sbjct: 79 DTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + + + KLN+IL+ TG+P++ IE DTDRDNFM A +A+EYG++D V+
Sbjct: 139 AAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEYGIIDRVL 190
>sp|Q8XYP7|CLPP_RALSO ATP-dependent Clp protease proteolytic subunit OS=Ralstonia
solanacearum (strain GMI1000) GN=clpP PE=3 SV=1
Length = 217
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 139/172 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++R+IF+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AG+ +Y
Sbjct: 41 DIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAMY 100
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+G+AASMGAFLLAAG+KGKRY +PN+R+MIHQPLG A G+A+D+ I
Sbjct: 101 DTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEI 160
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ RE+ Y + +LN ILS TG+PV +I DTDRDNFM +AKEYGL+D V+
Sbjct: 161 QAREILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQAKEYGLIDKVL 212
>sp|Q2JIP1|CLPP2_SYNJB ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain JA-2-3B'a(2-13)) GN=clpP2 PE=3 SV=1
Length = 200
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 137/173 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR RIIFLG+QVDD A+ I++Q+L+L++ED +KDI L+INSPGGSV AGM I
Sbjct: 16 FDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAI 75
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ + DVSTIC+GLAASMGAFLLA G+KGKR +P+AR+MIHQPLG A G ATD+
Sbjct: 76 YDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIE 135
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I+ +E+ + K LN +L+ TG+P+++IE DTDRDNFM +AKEYGL+D VI
Sbjct: 136 IQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
>sp|Q2JV68|CLPP2_SYNJA ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1
Length = 200
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 137/173 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR RIIFLG+QVDD A+ I++Q+L+L++ED +KDI L+INSPGGSV AGM I
Sbjct: 16 FDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAI 75
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ + DVSTIC+GLAASMGAFLLA G+KGKR +P+AR+MIHQPLG A G ATD+
Sbjct: 76 YDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIE 135
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I+ +E+ + K LN +L+ TG+P+++IE DTDRDNFM +AKEYGL+D VI
Sbjct: 136 IQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
>sp|B7GL34|CLPP_ANOFW ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1
Length = 196
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 136/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGS +DD A+ I+SQLLFL AED +KDI L+INSPGGS+TAGM IY
Sbjct: 19 DIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG G+AT++ I
Sbjct: 79 DTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + + + KLN+ILS TG+P++ IE DTDRDNFM A +AKEYGL+D V+
Sbjct: 139 AAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRVL 190
>sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=clpP2 PE=3 SV=1
Length = 226
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 141/185 (76%), Gaps = 2/185 (1%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LLR+RIIFLG+ VDD AD I++QLLFLDAED +KDI+L+INSPGGSV AG+ I
Sbjct: 38 FDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAI 97
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ + DV TIC GLAASMGAFLL+ G KGKR +P++R+MIHQPLG A G+A ++
Sbjct: 98 YDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIE 157
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPGL 265
I+ RE+ Y K +LN +L TG+P+++++ DT+RD FM A EAKEYGL+D VI +P L
Sbjct: 158 IQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVIS--RPNL 215
Query: 266 VAPTS 270
PT+
Sbjct: 216 PDPTT 220
>sp|A6VW20|CLPP_MARMS ATP-dependent Clp protease proteolytic subunit OS=Marinomonas sp.
(strain MWYL1) GN=clpP PE=3 SV=1
Length = 210
Score = 224 bits (572), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 135/173 (78%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LL++R+IFL QV+D A+ +++QLLFL++E+ KDI L+INSPGGSVTAGM I
Sbjct: 33 FDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGMSI 92
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ K DVST+C+G AASMGA LL AG+ GKRYC+PN+RVMIHQPLG G+A+D+
Sbjct: 93 YDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQPLGGYQGQASDIE 152
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
I RE+ K KLN+I+S TGKP++Q+ LDTDRDNFM+ AK+YGL+D ++
Sbjct: 153 IHTREILSIKHKLNEIISFHTGKPIEQVALDTDRDNFMNPQTAKDYGLIDEIL 205
>sp|B9EAG5|CLPP_MACCJ ATP-dependent Clp protease proteolytic subunit OS=Macrococcus
caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1
Length = 194
Score = 224 bits (572), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 136/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGS +DD A+ I+SQLLFL A+D++KDI L+INSPGGSVTAGM IY
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
R + + KLN+IL+ TG+P+++IE DTDRDNF+ A EAK YGL+D V+
Sbjct: 139 AARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYGLIDEVM 190
>sp|Q5KVD9|CLPP_GEOKA ATP-dependent Clp protease proteolytic subunit OS=Geobacillus
kaustophilus (strain HTA426) GN=clpP PE=3 SV=1
Length = 196
Score = 224 bits (572), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 136/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RI+FLGS +DD A+ I+SQLLFL AED KDI L+INSPGGS+TAG+ IY
Sbjct: 19 DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSITAGLAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG A G+AT++ I
Sbjct: 79 DTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + + + KLN+ILS TG+P++ IE DTDRDNFM A +A EYG++D V+
Sbjct: 139 AAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIIDRVL 190
>sp|C5D7M9|CLPP_GEOSW ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp.
(strain WCH70) GN=clpP PE=3 SV=1
Length = 196
Score = 224 bits (571), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 137/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGS +DD A+ I+SQLLFL AED +KDI L+INSPGGS+TAG+ IY
Sbjct: 19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG A G+AT++ I
Sbjct: 79 DTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + + + KLN+IL+ TG+PV+ IE DTDRDNFM A +A+EYG++D V+
Sbjct: 139 AAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYGIIDRVL 190
>sp|A0Q2L1|CLPP_CLONN ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi
(strain NT) GN=clpP PE=3 SV=1
Length = 195
Score = 224 bits (570), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 134/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RIIFLG +V+D+TA +++QLLFL+AED KDI L+INSPGGS+TAGM IY
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVSTIC+G+AASMGAFLL AG+KGKR+ +PN+ +MIHQPLG G+ATD+ I
Sbjct: 79 DTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATDIGI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ K KLN ILS TG+P++ I+ D +RDNFM+A EAKEYGL+D VI
Sbjct: 139 HANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYGLIDDVI 190
>sp|Q2SWQ6|CLPP_BURTA ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=clpP PE=3 SV=1
Length = 207
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 91
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 92 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 151
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y K +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 152 QAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
>sp|Q1H1G0|CLPP_METFK ATP-dependent Clp protease proteolytic subunit OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpP
PE=3 SV=1
Length = 213
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 136/172 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RIIFL V+D TA+ +++QLLFL+AE+ KDI +INSPGGSVTAGMGIY
Sbjct: 35 DIYSRLLKERIIFLVGPVNDATANLVVAQLLFLEAENPDKDIYFYINSPGGSVTAGMGIY 94
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+G AASMGA LLAAG++GKR+C+PN+RVMIHQPLG G+A+D+ I
Sbjct: 95 DTMQFVKPDVSTLCVGQAASMGALLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQASDIEI 154
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+E+ + + KLN IL+ TG+PV++I LDTDRDNFM A ++ YG+VD VI
Sbjct: 155 HAKEILFLREKLNHILASHTGQPVEKIALDTDRDNFMSAEQSVAYGIVDKVI 206
>sp|Q65EI5|CLPP1_BACLD ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=clpP1 PE=3
SV=1
Length = 198
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 133/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGS +DD A+ I+SQLLFL+AED +KDI ++INSPGGS+TAGM IY
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K VSTIC G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I
Sbjct: 79 DTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + + KLNKIL+ TG+P++ IE DTDRDNF A EAKEYGL+D V+
Sbjct: 139 AAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAKEYGLIDKVL 190
>sp|A3QFX6|CLPP_SHELP ATP-dependent Clp protease proteolytic subunit OS=Shewanella
loihica (strain ATCC BAA-1088 / PV-4) GN=clpP PE=3 SV=1
Length = 203
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 138/173 (79%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++R+IFL QV++ A+ I++QLLFL++E KDI L+INSPGGSVTAGM IY
Sbjct: 28 DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIYLYINSPGGSVTAGMAIY 87
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K +VST+C+G AASMGAFLLA G+KGKR+C+PN+RVMIHQPLG G+A+D++I
Sbjct: 88 DTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRVMIHQPLGGFQGQASDIAI 147
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+E+ K KLN++L+ TG+P++ IE DTDRDNFM A EA EYGLVD+V+D
Sbjct: 148 HAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVLD 200
>sp|A8ZXB7|CLPP_DESOH ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1
Length = 205
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 139/175 (79%)
Query: 86 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGI 145
D + LL+ RI+F+GS +DD TA+ +I+QLLFL++ED KDI +INSPGG V+AGM I
Sbjct: 18 FDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAI 77
Query: 146 YDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMS 205
YD M+ K+D++T+C+G AASMGAFLLAAG+KGKR+ +PN+R+MIHQP+G A G+A+D++
Sbjct: 78 YDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIA 137
Query: 206 IRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDD 260
I+ +E+ K LN+IL+ TGKP++QI++DTDRD FM EAK YG+VD VI D
Sbjct: 138 IQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVITD 192
>sp|Q13Z15|CLPP2_BURXL ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia
xenovorans (strain LB400) GN=clpP2 PE=3 SV=1
Length = 217
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 137/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+FL +V+D TA+ +++Q+LFL++E+ KDI +INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDISFYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLAAG+KGKR+ +PN+RVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y K +LN +L+ TG+PV++I DTDRDNFM +A+ YGLVD V
Sbjct: 162 QAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
>sp|Q3JRC9|CLPP_BURP1 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain 1710b) GN=clpP PE=3 SV=1
Length = 207
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 91
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 92 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 151
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 152 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
>sp|Q62JK7|CLPP_BURMA ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain ATCC 23344) GN=clpP PE=3 SV=1
Length = 207
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 91
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 92 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 151
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 152 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
>sp|Q8CTE0|CLPP_STAES ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=clpP PE=3 SV=1
Length = 194
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 136/173 (78%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGSQ+DD A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG IY
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+ + KLN+ILS TG+ +++I+ DTDRDNF+ A EAKEYGL+D V++
Sbjct: 139 AANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDEVME 191
>sp|Q5HQW0|CLPP_STAEQ ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=clpP PE=3
SV=1
Length = 194
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 136/173 (78%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGSQ+DD A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG IY
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVID 259
+ + KLN+ILS TG+ +++I+ DTDRDNF+ A EAKEYGL+D V++
Sbjct: 139 AANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDEVME 191
>sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subunit OS=Moorella
thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1
Length = 199
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 134/172 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RIIFLGS +DD A+ +I+Q+LFL+AED KDI L+INSPGGS++AGM I+
Sbjct: 20 DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIF 79
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ + DVSTIC+GLAASMGAFLLAAG+KGKR+ +PN+ +MIHQP+G G+A D+ I
Sbjct: 80 DTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEI 139
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + + LN+ILS TGKP++QI DTDRD+FM A EA+EYGL+D VI
Sbjct: 140 HAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVI 191
>sp|Q63V41|CLPP_BURPS ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain K96243) GN=clpP PE=3 SV=1
Length = 217
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 162 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>sp|A3NAI5|CLPP_BURP6 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain 668) GN=clpP PE=3 SV=1
Length = 217
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 162 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>sp|A3NWA6|CLPP_BURP0 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain 1106a) GN=clpP PE=3 SV=1
Length = 217
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 162 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>sp|A1V4X1|CLPP_BURMS ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain SAVP1) GN=clpP PE=3 SV=1
Length = 217
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 162 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>sp|A2SBG3|CLPP_BURM9 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain NCTC 10229) GN=clpP PE=3 SV=1
Length = 217
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 162 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>sp|A3MKJ8|CLPP_BURM7 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain NCTC 10247) GN=clpP PE=3 SV=1
Length = 217
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 138/171 (80%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RI+F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IY
Sbjct: 42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIY 101
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M+ K DVST+C+GLAASMGAFLLA+G+KGKRY +PNARVMIHQPLG A G+A+D+ I
Sbjct: 102 DTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEI 161
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAV 257
+ RE+ Y + +LN +L+ TG+ V++I DTDRDNFM + +AK YGL+D V
Sbjct: 162 QAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>sp|A6TM61|CLPP_ALKMQ ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus
metalliredigens (strain QYMF) GN=clpP PE=3 SV=1
Length = 194
Score = 222 bits (566), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 136/176 (77%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL++RIIFLG +++D+TA +++QLLFL+AED KDI+++INSPGGS+TAGM IY
Sbjct: 19 DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPGGSITAGMAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D M K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PNA VMIHQPLG G+A D+ I
Sbjct: 79 DTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGTRGQAEDIRI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK 262
+ + LNKIL TG+P+++++ DTDRD FM+A EAKEYG++D VI K
Sbjct: 139 HAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYGIIDEVISSRK 194
>sp|P63786|CLPP_STAAW ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus
aureus (strain MW2) GN=clpP PE=1 SV=1
Length = 195
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 135/172 (78%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGSQ+DD A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG IY
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + KLN+ILS TG+ +++I+ DTDRDNF+ A EAKEYGL+D V+
Sbjct: 139 AANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
>sp|A8Z045|CLPP_STAAT ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=clpP PE=3 SV=1
Length = 195
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 135/172 (78%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGSQ+DD A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG IY
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + KLN+ILS TG+ +++I+ DTDRDNF+ A EAKEYGL+D V+
Sbjct: 139 AANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
>sp|Q6GB62|CLPP_STAAS ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus
aureus (strain MSSA476) GN=clpP PE=3 SV=1
Length = 195
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 135/172 (78%)
Query: 87 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIY 146
D + LL+ RII LGSQ+DD A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG IY
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIY 78
Query: 147 DAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 206
D ++ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct: 79 DTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
Query: 207 RIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVI 258
+ + KLN+ILS TG+ +++I+ DTDRDNF+ A EAKEYGL+D V+
Sbjct: 139 AANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,349,291
Number of Sequences: 539616
Number of extensions: 5301238
Number of successful extensions: 17115
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 16076
Number of HSP's gapped (non-prelim): 838
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 61 (28.1 bits)