BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020210
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 283 bits (725), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 219/343 (63%), Gaps = 42/343 (12%)
Query: 1 MALEAVVYPKPQDPFGYSCNKDIYSSPGEGGGAWGYDFCFQQEDRTLLGIIDANI-IEQG 59
MALEAVVYP QDPF Y KD YD FQ+E+ NI + QG
Sbjct: 1 MALEAVVYP--QDPFSYISCKDF----------PFYDLYFQEEEDQDPQDTKNNIKLGQG 48
Query: 60 LHANWDSS---------SSPTIMQHANESWGPNSSPDAYAADQTLSAGSFSPAAAATTGG 110
+ S+ S + W P P A D + P+ A GG
Sbjct: 49 QGHGFASNNYNGRTGDYSDDYNYNEEDLQW-PRDLPYGSAVD---TESQPPPSDVAAGGG 104
Query: 111 RRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
RRKRRRT+SSKNKEEIENQRMTHIAVERNRRKQMNEYLA+LRSLMPP Y QRGDQAS++G
Sbjct: 105 RRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVG 164
Query: 171 GSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGV-------SSPFANFFTFPQYSTRSSQ 223
G+IN++KELE LQSME + ++ AG + S PF++FF FPQYS R +
Sbjct: 165 GAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTS 224
Query: 224 SNNLAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNV 283
++ E +A+IEV M ESHA++KIL KKRPRQLLK+V+S Q+LRL++LHLNV
Sbjct: 225 ---------AAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNV 275
Query: 284 STVDQMVLYSVSVKVEEGSQLNTVDEIAAAVHQILLEIEEEAT 326
+T D VLYS+SVKVEEGSQLNTV++IAAAV+QIL IEEE++
Sbjct: 276 TTRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEESS 318
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 211/340 (62%), Gaps = 51/340 (15%)
Query: 1 MALEAVVYPKPQDPFGYSCN------KDIYSSPGEGGGAWGYDFCFQQEDRTL--LGIID 52
M LEAVVYP QDPFGY N D+YS +F Q + LG +
Sbjct: 1 MPLEAVVYP--QDPFGYLSNCKDFMFHDLYSQE---------EFVAQDTKNNIDKLGH-E 48
Query: 53 ANIIEQGL---HANWDSSSSPTIMQHANESWGPNSSPDAYAADQTLSAGSFSPAAAATTG 109
+ +EQG H D P ++ E G + + S P
Sbjct: 49 QSFVEQGKEDDHQWRDYHQYPLLIPSLGEELGLTA----------IDVESHPPPQHRRK- 97
Query: 110 GRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVI 169
RRRT++ KNKEEIENQRMTHIAVERNRRKQMNEYLA+LRSLMP SY QRGDQAS++
Sbjct: 98 ----RRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIV 153
Query: 170 GGSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSS----PFANFFTFPQYSTRSSQSN 225
GG+IN+VKELE +LQSME ++ T GD +S PF +FF+FPQYST+SS
Sbjct: 154 GGAINYVKELEHILQSMEPKRTRTHD--PKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV 211
Query: 226 NLAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVST 285
+ + A+IEV +AESHANIKI+TKK+PRQLLK++ S Q+LRL++LHLNV+T
Sbjct: 212 -------PESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTT 264
Query: 286 VDQMVLYSVSVKVEEGSQLNTVDEIAAAVHQILLEIEEEA 325
+ +LYS+SV+VEEGSQLNTVD+IA A++Q + I+EE
Sbjct: 265 LHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEET 304
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 141/207 (68%), Gaps = 6/207 (2%)
Query: 121 KNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELE 180
KNK+E+ENQRMTHIAVERNRR+QMNE+L LRSLMPPS++QRGDQAS++GG+I+F+KELE
Sbjct: 105 KNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELE 164
Query: 181 QLLQSMEAQKRN--TSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTEN 238
QLLQS+EA+KR T + K SS A + + +S++ A TE
Sbjct: 165 QLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTE- 223
Query: 239 VADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKV 298
+E + ++H ++K+ K+ RQ+LK + S + L+L++LHL +S+ V+YS ++K+
Sbjct: 224 ---VEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKM 280
Query: 299 EEGSQLNTVDEIAAAVHQILLEIEEEA 325
E+G +L + DEIA AVHQI +I E
Sbjct: 281 EDGCKLGSADEIATAVHQIFEQINGEV 307
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 19/222 (8%)
Query: 111 RRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
+ KR+R ++SK EE+E+QRMTHIAVERNRRKQMNE+L +LRSLMP SYVQRGDQAS+IG
Sbjct: 177 KSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 236
Query: 171 GSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPD 230
G+I FV+ELEQLLQ +E+QKR ++L G+ G + +T ++Q+ L
Sbjct: 237 GAIEFVRELEQLLQCLESQKRR--RIL--GETGRDMTTTTTSSSSPITTVANQAQPLIIT 292
Query: 231 HESSMTEN--------------VADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRL 276
+ E +AD+EV + A IKIL+++RP QL+K +A+ ++L L
Sbjct: 293 GNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHL 352
Query: 277 SVLHLNVSTVDQMVLYSVSVKVEEGSQLNTVDEIAAAVHQIL 318
S+LH N++T++Q VLYS +VK+ ++ T ++IA+++ QI
Sbjct: 353 SILHTNITTMEQTVLYSFNVKITSETRF-TAEDIASSIQQIF 393
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 140/212 (66%), Gaps = 12/212 (5%)
Query: 119 SSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKE 178
S K + ENQRM HIAVERNRRKQMN +L+IL+S+MP SY Q DQAS+I G+I+++K+
Sbjct: 90 SEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKK 149
Query: 179 LEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMT-- 236
LEQ LQS+EAQ + T N + F++FF FPQYST ++ + A SS
Sbjct: 150 LEQRLQSLEAQLKATKL------NQSPNIFSDFFMFPQYSTATATATATASSSSSSHHHH 203
Query: 237 ---ENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYS 293
E VAD+EV M E HANIK+LTK +PR L K++ F +L LS LHLN++T M L++
Sbjct: 204 KRLEVVADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFT 263
Query: 294 VSVKVEEGSQLN-TVDEIAAAVHQILLEIEEE 324
SVKVE QL + +E+A VH+++ + +E
Sbjct: 264 FSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 150/230 (65%), Gaps = 31/230 (13%)
Query: 121 KNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELE 180
KN+EE ENQRMTHIAVERNRR+QMN++L++LRSLMP + +GDQAS++GG+I+F+KELE
Sbjct: 78 KNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELE 137
Query: 181 QLLQSMEAQKRNTSQLLKAGDNGVSS---------------PFANFFTFPQYSTRSSQSN 225
L S+EAQK + ++L ++ + S + FF +S SQ N
Sbjct: 138 HKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFL---HSYDPSQEN 194
Query: 226 NLAPDHESSMTENVADIEVNMAESHANIKILTKKR-----------PRQLLKMVASFQNL 274
SS+ + D+EV + E+HANI+IL+++R P QL K+VAS Q+L
Sbjct: 195 RNGST--SSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSL 252
Query: 275 RLSVLHLNVSTVDQMVLYSVSVKVEEGSQLNTVDEIAAAVHQILLEIEEE 324
LS+LHL+V+T+D +YS+S KVEE QL++VD+IA AVH +L IEEE
Sbjct: 253 SLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%), Gaps = 13/198 (6%)
Query: 122 NKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQ 181
N EEIE+QRMTHIAVERNRR+QMN +L LRS++P SY+QRGDQAS++GG+I+FVK LEQ
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243
Query: 182 LLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTENVAD 241
LQS+EAQKR+ ++ DN P N S R+ SN L ++ + +
Sbjct: 244 QLQSLEAQKRSQ----QSDDNKEQIPEDN-------SLRNISSNKLRASNKEEQSSKLK- 291
Query: 242 IEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVST-VDQMVLYSVSVKVEE 300
IE + ESH N+KI ++ QLL+ + + LR +VLHLN+++ + V YS ++K+E+
Sbjct: 292 IEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMED 351
Query: 301 GSQLNTVDEIAAAVHQIL 318
L + DEI AA+ QI
Sbjct: 352 ECNLGSADEITAAIRQIF 369
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 136/204 (66%), Gaps = 22/204 (10%)
Query: 120 SKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKEL 179
SKN EEIENQR+ HIAVERNRR+QMNE++ LR+L+PPSY+QRGDQAS++GG+IN+VK L
Sbjct: 167 SKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVL 226
Query: 180 EQLLQSMEAQKR----NTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSM 235
EQ++QS+E+QKR + S++++ N +S +N ++T Q+
Sbjct: 227 EQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDL----WTTLEDQT----------- 271
Query: 236 TENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVST-VDQMVLYSV 294
+ IE + ++H ++K+ +K+ QLLK + S + L+L+VLHLN++T V YS
Sbjct: 272 --CIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSF 329
Query: 295 SVKVEEGSQLNTVDEIAAAVHQIL 318
++K+E+ L + DEI AAVH+I
Sbjct: 330 NLKMEDECDLESADEITAAVHRIF 353
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 21/181 (11%)
Query: 131 MTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQK 190
M+HIAVERNRR+QMNE+L LRSL P Y++RGDQAS+IGG I F+KEL+QL+Q +E++K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 191 RNTS----------QLLKAGDNGVSS---PFANFFTFPQYSTRSSQSNNLAPDHESSMTE 237
R + Q ++ G ++ PF+ ST H
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH------ 114
Query: 238 NVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVK 297
A++E ++ S+ +++++++ QL+K+++ + L VLHLN+S++++ VLY VK
Sbjct: 115 --ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVK 172
Query: 298 V 298
+
Sbjct: 173 I 173
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 37/144 (25%)
Query: 87 DAYAADQTLS-AGSFSPAAAAT-------------------TGGRRKRRRTKSSK----- 121
D +A ++L AG SP AA+T + +RK++R ++ K
Sbjct: 23 DLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQDYENSSPKRKKQRLETRKEEDEE 82
Query: 122 -----------NKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
NK++ + Q+M+H+ VERNRRKQMNE+L +LRSLMP YV+RGDQAS+IG
Sbjct: 83 EEDGDGEAEEDNKQDGQ-QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIG 141
Query: 171 GSINFVKELEQLLQSMEAQKRNTS 194
G + ++ EL+Q+LQS+EA+K+ +
Sbjct: 142 GVVEYISELQQVLQSLEAKKQRKT 165
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 221 SSQSNNLAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLH 280
SS N L + +S++ AD+EV + ++ +K ++ K P Q++K++A+ ++L L +L
Sbjct: 271 SSVINELVANSKSAL----ADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQ 326
Query: 281 LNVSTVDQMVLYSVSVKVEEGSQLNTVDEIAAAVHQ 316
+N++TVD+ +L S ++K+ QL + +E+A + Q
Sbjct: 327 VNINTVDETMLNSFTIKIGIECQL-SAEELAQQIQQ 361
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 111 RRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
++ R+R + N E + + H+ ER RR+++N+ LR+++P V + D+AS++G
Sbjct: 398 KKPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKASLLG 452
Query: 171 GSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPD 230
+I+++ EL+ LQ E+ K + + + + +SS + +
Sbjct: 453 DAISYISELKSKLQKAESDKEELQKQI------------DVMNKEAGNAKSSVKDRKCLN 500
Query: 231 HESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMV 290
ESS+ + +++V + A I+I KR K + + + L L V H ++S V+ ++
Sbjct: 501 QESSVLIEM-EVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLM 559
Query: 291 LYSVSVKVEEGSQLNTVDEIAAAVHQILLEI 321
+ +VK+ G+Q T D++ A+ + + E
Sbjct: 560 IQQATVKM--GNQFFTQDQLKVALTEKVGEC 588
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 111 RRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
++ R+R + N E + + H+ ER RR+++N+ LR+++P V + D+AS++G
Sbjct: 397 KKPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLG 451
Query: 171 GSINFVKELEQLLQSMEAQKRNTSQLL----KAGDNGVSSPFANFFTFPQYSTRSSQSNN 226
+I+++ EL+ LQ E+ K + L K G+NG +R+ + +
Sbjct: 452 DAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNG-----------KGCGSRAKERKS 500
Query: 227 LAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTV 286
D +S E +I+V + I++ K+ + + + + L L V H ++S V
Sbjct: 501 SNQDSTASSIE--MEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVV 558
Query: 287 DQMVLYSVSVKVEEGSQLNTVDEIAAAV 314
+ +++ +VK+ GSQ D++ A+
Sbjct: 559 NDLMIQQATVKM--GSQFFNHDQLKVAL 584
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
+I ERNRR+++N+ L LRS++P + + D+AS+I +I++++ L+ + +EA+ R
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 193 TSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTENVADIEVN-MAESHA 251
K+ S F P S + Q L +S+ E V +++V M E
Sbjct: 114 LESTPKSS-LSFSKDFDRDLLVPVTSKKMKQ---LDSGSSTSLIE-VLELKVTFMGERTM 168
Query: 252 NIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKVEEGSQ 303
+ + KR ++K+ F++L L +L N+++ M+ ++V ++ +E Q
Sbjct: 169 VVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQ 220
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
++ ER RRK++N+ L +LRS++P + + D+AS++G +I+++KEL Q + + + +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 193 TSQLLKAGDNGVSSPFANFFTFPQ-YSTRSSQSNNLAPDHESSMTENVADIEVNMAESHA 251
T SS F PQ S R + L P S A +EV + E A
Sbjct: 366 TP---PGSLPPTSSSFHPLTPTPQTLSCRVKEE--LCPSSLPSPKGQQARVEVRLREGRA 420
Query: 252 -NIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSV-KVEEGSQLNTVDE 309
NI + +RP LL + + NL L V +S + L + +EG ++ D+
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEI-LPDQ 479
Query: 310 IAAAV 314
I A +
Sbjct: 480 IKAVL 484
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 111 RRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
R K+R K + +EE + H+ ER RR+++N+ LR+++P V + D+AS++G
Sbjct: 435 RPKKRGRKPANGREE----PLNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLG 488
Query: 171 GSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPD 230
+I ++ EL+ + E++K L+ ++S S
Sbjct: 489 DAIAYINELKSKVVKTESEKLQIKNQLEE------------VKLELAGRKASASGGDMSS 536
Query: 231 HESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMV 290
SS+ +IEV + A I++ + KR +++++ +L L V H ++S V+ ++
Sbjct: 537 SCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLM 596
Query: 291 LYSVSVKVEEGSQLNTVDEIAAAV 314
+ +VK+ G ++ T +++ A++
Sbjct: 597 IQQATVKM--GFRIYTQEQLRASL 618
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 101 SPAAAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYV 160
SP TT + K+R ++ KN EE HI ER RRK+M + + L +L+ P
Sbjct: 42 SPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALL-PQLP 100
Query: 161 QRGDQASVIGGSINFVKELEQLLQSMEAQK 190
+ D+++++ +++ +K LEQ LQ +E QK
Sbjct: 101 PKADKSTIVDEAVSSIKSLEQTLQKLEMQK 130
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 111 RRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIG 170
+R R+R + N E + + H+ ER RR+++N+ LRS++P + + D+AS++G
Sbjct: 377 KRPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYALRSVVP--NISKMDKASLLG 431
Query: 171 GSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPD 230
+I+++KEL++ ++ ME ++ T + L S+SN +
Sbjct: 432 DAISYIKELQEKVKIMEDERVGTDKSL------------------------SESNTIT-- 465
Query: 231 HESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMV 290
E ++++ +++++ +++ + +N +S++ +S + +
Sbjct: 466 -----VEESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTM 520
Query: 291 LYSVSVKVEEGSQLNTVDEIAAAVH 315
++ +K GS T +++ AA +
Sbjct: 521 FHTFVIKSNNGSDPLTKEKLIAAFY 545
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
++ ER RRK++N+ L +LRS++P + + D+AS++G +I+++KEL Q + + + +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 193 TSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTENVADIEVNMAESHA- 251
T SS PQ + + S +EV + E A
Sbjct: 326 TPP--------SSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAV 377
Query: 252 NIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVL 291
NI + +RP LL + + NL L V +S + L
Sbjct: 378 NIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFAL 417
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 97 AGSFSPAAAAT-TGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLM 155
G ++ A A +G R R+R + N + + H+ ER RR+++N+ LRS++
Sbjct: 400 GGEWADAVGADESGNNRPRKRGRRPANGRA---EALNHVEAERQRREKLNQRFYALRSVV 456
Query: 156 PPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQK 190
P + + D+AS++G +++++ EL L+ MEA++
Sbjct: 457 P--NISKMDKASLLGDAVSYINELHAKLKVMEAER 489
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 136 VERNRRKQMNEYLAILRSLMP-PSYVQRGDQASVIGGSINFVKELEQLLQSME--AQKRN 192
ER RR + L++L+P P+ + D+AS++G +I+++KEL + + + +K+
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPT---KNDRASIVGEAIDYIKELLRTIDEFKLLVEKKR 276
Query: 193 TSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTENVADIEVNMAESHAN 252
Q + GD+ V F + + ++N L ++ D++V + +
Sbjct: 277 VKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSK-FTDVDVRIIDDEVT 335
Query: 253 IKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKVEEGSQLNTVDEIAA 312
IKI+ KK+ LL + L L + H+ + + + + + K+ EGS + IA
Sbjct: 336 IKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSSV-YASAIAD 394
Query: 313 AVHQIL 318
V ++L
Sbjct: 395 RVMEVL 400
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
H+ ER RR+++NE +L+SL+P + R ++AS++ +I ++KEL++ +Q +E+ +
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLP--SIHRVNKASILAETIAYLKELQRRVQELESSREP 476
Query: 193 TSQ 195
S+
Sbjct: 477 ASR 479
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
H+ ER RR+++NE +L+SL+P + R ++AS++ +I ++KEL++ +Q +E+ +
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLP--SIHRVNKASILAETIAYLKELQRRVQELESSREP 474
Query: 193 TSQ 195
S+
Sbjct: 475 ASR 477
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
++ ER RRK++N+ L LRSL+P + + D+AS++G +IN+VKEL+ + ++ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 193 TSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTENVADI------EVNM 246
S+ + N + S ++N+ + EN D +V++
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 247 AESHAN---IKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKVEEGSQ 303
A+ +K++ + +P +++ + +L L V N +T + L S KVE+
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEV--TNANTTRYLSLVSNVFKVEKND- 489
Query: 304 LNTVDEIAAAVH--QILLEI 321
+E+ A H LLEI
Sbjct: 490 ----NEMVQAEHVRNSLLEI 505
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 42/251 (16%)
Query: 78 ESWGPNSSPDAYAADQTLSAGSFSPAAAATTGGRRK-----RRRTKSSKNKEEIENQRMT 132
E +G N Y+ T FSP A +K R+ TK ++ ++
Sbjct: 95 EDYGSNDMEHEYSP--TYLNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSNAQD 152
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKR- 191
HI ER RR+++ + L +L+P +++ D+ASV+G ++ +K L++ + +E QK+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
Query: 192 ----------NTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMTENVAD 241
+ +L + SS + F+ ++ +
Sbjct: 211 RRLESMVLVKKSKLILDDNNQSFSSSCEDGFS----------------------DLDLPE 248
Query: 242 IEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKVEEG 301
IEV ++ IKIL +K+ L K++A + L + + + +V + ++ K E
Sbjct: 249 IEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITIIAKKESD 308
Query: 302 SQLNTVDEIAA 312
+ +D + +
Sbjct: 309 FDMTLMDVVKS 319
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 131 MTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSME 187
++H+ ER RR+++NE LRS++P +V + D+ S++G +I +V L + + +E
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 112 RKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGG 171
R ++ K + E ++ H +E+ RR+++NE LR ++P + + D+ S++
Sbjct: 421 RVHQKEKLMLDSPEARDETGNHAVLEKKRREKLNERFMTLRKIIPS--INKIDKVSILDD 478
Query: 172 SINFVKELEQLLQSMEAQKRNTS---------QLLKAGDNGVSSPFANFFTFPQYSTRSS 222
+I +++ELE+ +Q +E+ + +T + K D G + AN + +
Sbjct: 479 TIEYLQELERRVQELESCRESTDTETRGTMTMKRKKPCDAGERTS-ANCANNETGNGKKV 537
Query: 223 QSNNL--APDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLH 280
NN+ A ++ T ++ + + I++ R LL+++ +L L
Sbjct: 538 SVNNVGEAEPADTGFTGLTDNLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHS 597
Query: 281 LNVSTVDQMVLYSVSVKVEEGSQLNTVDEIAAAVHQI 317
+ ST D ++ +V+ K +GS++ T I A+ ++
Sbjct: 598 VQSSTGDGLLCLTVNCK-HKGSKIATPGMIKEALQRV 633
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 33/200 (16%)
Query: 96 SAGSFSPAAAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLM 155
S S SP AAT+ SSKN + ERNRR+++N+ L LRS++
Sbjct: 37 SGESSSPDGAATSPA--------SSKN-----------VVSERNRRQKLNQRLFALRSVV 77
Query: 156 PPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFP 215
P + + D+ASVI SI++++EL +++EA+ R +N V NF
Sbjct: 78 PN--ISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNF--AE 133
Query: 216 QYSTRSSQSNNLAPDHESSMTEN---------VADIEVN-MAESHANIKILTKKRPRQLL 265
+ S +N++ M + V +++V M E + I K+ ++
Sbjct: 134 THLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMV 193
Query: 266 KMVASFQNLRLSVLHLNVST 285
++ ++L L++L N S+
Sbjct: 194 QLCKVLESLNLNILTTNFSS 213
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 23/200 (11%)
Query: 101 SPAAAATTG----GRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMP 156
SPAA GR +R+T S + + + H+ ER RR++++E L +L+P
Sbjct: 86 SPAAEEIIMDKLVGRGTKRKTCSHGTRSPVLAKE--HVLAERKRREKLSEKFIALSALLP 143
Query: 157 PSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQ 216
+++ D+ +++ +I+ +K+L++ L++++ +K T Q+ S F F P
Sbjct: 144 G--LKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVF--FDEEPN 199
Query: 217 YSTRSSQSNNLAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRL 276
S +P + + +IE ++++ I+IL +K ++ ++ + +N +L
Sbjct: 200 LSC--------SPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQL 251
Query: 277 S-----VLHLNVSTVDQMVL 291
VL ST+D VL
Sbjct: 252 RIENSIVLPFGDSTLDITVL 271
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 22/136 (16%)
Query: 86 PDAYAADQTLSAGSF--SP-----------AAAATTGGRRKRRR--------TKSSKNKE 124
PD+ D L + SF SP + GG K+R +++KN +
Sbjct: 10 PDSTYEDGLLFSDSFLLSPFISYQNNDVFHSITNKIGGSNKKRSLCDITYGANEANKNDD 69
Query: 125 EIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQ-RGDQASVIGGSINFVKELEQLL 183
+ E+++M H +ER RR++++ LR+L+P Y+Q + + I ++N++K+L+ +
Sbjct: 70 DRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKI 129
Query: 184 QSMEAQKRNTSQLLKA 199
+ + ++ +++ A
Sbjct: 130 KELNEKRNRVKKVISA 145
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 112 RKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGG 171
R RR + +K KEE EN + ++ ER RR++++ L LRS +P V +AS++
Sbjct: 12 RMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVP--IVTNMTKASIVED 69
Query: 172 SINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDH 231
+I ++ EL+ N LL+ +P P+ + + P+
Sbjct: 70 AITYIGELQN----------NVKNLLETFHEMEEAP-------PEIDEEQTDP-MIKPEV 111
Query: 232 ESS----------MTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHL 281
E+S + ENV ++ E +KI+T+KR K + + L ++ +
Sbjct: 112 ETSDLNEEMKKLGIEENVQLCKI--GERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDI 169
Query: 282 NVSTVDQMVLYSVSVKVEE 300
+++T + +L S SV+ +E
Sbjct: 170 SLTTSNGAILISASVQTQE 188
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEA---- 188
H E+ RR+++NE LRS++P + + D+ S++ +I ++++L++ +Q +E+
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQELESCRES 463
Query: 189 ---QKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHE-----SSMTENVA 240
+ R T K D+ AN S R N+ D + +T+N
Sbjct: 464 ADTETRITMMKRKKPDDEEERASANCMN----SKRKGSDVNVGEDEPADIGYAGLTDN-- 517
Query: 241 DIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKVEE 300
+ ++ + I++ R LL+++ +L L + ST D ++ +V+ K +
Sbjct: 518 -LRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTVNCK-HK 575
Query: 301 GSQLNTVDEIAAAVHQI 317
G+++ T I A+ ++
Sbjct: 576 GTKIATTGMIQEALQRV 592
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 86 PDAYAADQTLSAGSFSPAAAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMN 145
P AY+ T+ F+ AA ++ R TK E E H ER RR ++N
Sbjct: 51 PTAYST--TMGRSFFAGAATSSKLFSRGFSVTKPKSKTESKEVAAKKHSDAERRRRLRIN 108
Query: 146 EYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSM 186
A LR+++P Q D+ASV+G ++ + EL++++Q +
Sbjct: 109 SQFATLRTILPNLVKQ--DKASVLGETVRYFNELKKMVQDI 147
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 109 GGRRKRRRT-----KSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRG 163
G RKRRR ++ KE+ ++H+ E+ RR+++N LR+++P V R
Sbjct: 221 GSERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPK--VSRM 278
Query: 164 DQASVIGGSINFVKELEQLLQSMEAQ 189
D+AS++ ++++++ L+ + +E +
Sbjct: 279 DKASLLSDAVSYIESLKSKIDDLETE 304
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 117 TKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFV 176
T ++ +++E Q ++ ER RRK++N+ L++LRS++P + + D+ S++G +I+++
Sbjct: 136 TNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPK--ITKMDRTSILGDAIDYM 193
Query: 177 KELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNLAPDHESSMT 236
KEL + ++ ++ G +S + T SM
Sbjct: 194 KELLDKINKLQEDEQEL---------GSNSHLSTLIT------------------NESMV 226
Query: 237 ENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSV 296
N EV+ E + +I I +P ++ V++ + L L + +S L +
Sbjct: 227 RNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCF 286
Query: 297 KVEE 300
+V E
Sbjct: 287 EVGE 290
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRN 192
H+ ER RR+++NE L L +L+P +++ D+A+V+ +I +K+L++ ++ +E ++
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPG--LKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
Query: 193 TSQL 196
T ++
Sbjct: 191 TKKM 194
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 108 TGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQAS 167
T ++ R+R + N E + + H+ ER RR+++N+ LR+++P + + D+AS
Sbjct: 299 TDEQKPRKRGRKPANGRE---EALNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKAS 353
Query: 168 VIGGSINFVKELEQLLQSMEAQKR 191
++ +I ++ ++++ ++ E +K+
Sbjct: 354 LLADAITYITDMQKKIRVYETEKQ 377
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 104 AAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRG 163
++ATT R+TK+ +++ I ER RR +M + L LRSL+P + +
Sbjct: 112 SSATTTNNDGTRKTKTDRSRTLIS---------ERRRRGRMKDKLYALRSLVP--NITKM 160
Query: 164 DQASVIGGSINFVKELE 180
D+AS++G ++ +V+EL+
Sbjct: 161 DKASIVGDAVLYVQELQ 177
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 92/200 (46%), Gaps = 29/200 (14%)
Query: 104 AAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRG 163
+ GG ++++K ++E Q ++ ER RRK++N+ L++LRS++P + +
Sbjct: 156 SVGYCGGETNKKKSK------KLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPK--ISKM 207
Query: 164 DQASVIGGSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQ 223
D+ S++G +I+++KEL + ++ +++ +L + ++ S F + +
Sbjct: 208 DRTSILGDAIDYMKELLDKINKLQDEEQ---ELGNSNNSHHSKLFGDL--------KDLN 256
Query: 224 SNNLAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNV 283
+N + N E++ + + I +P LL V + + L L + +
Sbjct: 257 AN-------EPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVI 309
Query: 284 STVDQMVLYSVSVKVEEGSQ 303
S +S+ EG++
Sbjct: 310 SCFSD---FSLQASCSEGAE 326
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2
SV=1
Length = 257
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 121 KNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQ-RGDQASVIGGSINFVKEL 179
K +E +N+R H +ER RR++ ILR L+P Y++ + A + ++N++K+L
Sbjct: 67 KGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDL 126
Query: 180 EQLLQSMEAQKRN 192
++ ++ + ++KR+
Sbjct: 127 QKKIKEV-SEKRD 138
>sp|Q6VNZ9|MYF6_DANRE Myogenic factor 6 OS=Danio rerio GN=myf6 PE=2 SV=1
Length = 239
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 102 PAAAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQ 161
P A G+ K K K ++R ER R K++NE L+ P+ Q
Sbjct: 66 PGLQAHCEGQCLMWACKICKRKSAPTDRRKAATLRERRRLKKINEAFDALKKKTVPNPNQ 125
Query: 162 RGDQASVIGGSINFVKELEQLLQSMEAQKRNTSQLLKAGDNGVSSPFA-----NFFTFPQ 216
R + ++ +IN++++L+ LL S++ Q+++ + P+ N T +
Sbjct: 126 RLPKVEILRSAINYIEKLQDLLHSLDEQEQSND----------TDPYTYNLKENHVTPSE 175
Query: 217 YS-TRSSQSNNLAPDHESS 234
Y ++ QS PDH SS
Sbjct: 176 YHWKKTCQSWQENPDHSSS 194
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 128 NQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSME 187
++ + H+ ER RR+++N LR+++P V + D+ S++ ++ ++ EL+ +++E
Sbjct: 339 DKPLNHVEAERMRREKLNHRFYALRAVVP--NVSKMDKTSLLEDAVCYINELKSKAENVE 396
Query: 188 AQKRNTSQLLKAGDNGVSSPFANFFTFPQYSTRSSQSNNL--APDHESSMTENVADIEVN 245
+K A F + + Q N + +E +E + IEV
Sbjct: 397 LEKH-----------------AIEIQFNELKEIAGQRNAIPSVCKYEEKASE-MMKIEVK 438
Query: 246 MAES-HANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKV 298
+ ES A +++ ++K +++ + +L L V H ++S ++ +++ +VK+
Sbjct: 439 IMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKM 492
>sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126
PE=2 SV=1
Length = 221
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 133 HIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQA--SVIGGSINFVKELEQLLQSMEAQK 190
H +ER RR++M A LR+ +P Y+ +G +A + G++NF+K+ E ++ + A++
Sbjct: 47 HRDIERQRRQEMATLFATLRTHLPLKYI-KGKRAVSDHVNGAVNFIKDTEARIKELSARR 105
Query: 191 RNTSQ 195
S+
Sbjct: 106 DELSR 110
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 24/204 (11%)
Query: 137 ERNRRKQMNEYLAILRSLMP-PSYVQRGDQASVIGGSINFVKELEQLLQ--SMEAQKRNT 193
ER RR N+ L++L+P P+ + D+AS++G +I+++KEL + ++ M +K+
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKI---DRASIVGEAIDYIKELLRTIEEFKMLVEKKRC 308
Query: 194 SQLLKAGDNGVSSPFANFFTF---------PQ----YSTRSSQSNNLAPDHESSMTENVA 240
+ V PQ S + +NN V
Sbjct: 309 GRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVT 368
Query: 241 DIEVNMAESHANIKILTKKRPRQLLKMVASFQNLRLSVLHLNVSTVDQMVLYSVSVKVEE 300
+++V + + IK++ KK+ LL L+L + H+ + + + + K+ E
Sbjct: 369 EVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKICE 428
Query: 301 GSQLNTVDEIAAAVHQILLEIEEE 324
GS + A+ + L+E+ E+
Sbjct: 429 GSCV-----YASGIADTLMEVVEK 447
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 118 KSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASVIGGSINFVK 177
+ SK ++ R H E+ RR ++NE ILR L+P S +R D AS + I++V+
Sbjct: 35 RDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKR-DTASFLLEVIDYVQ 93
Query: 178 ELEQLLQSMEA 188
L++ +Q E
Sbjct: 94 YLQEKVQKYEG 104
>sp|Q6PUV5|MYF6_TETNG Myogenic factor 6 OS=Tetraodon nigroviridis GN=myf6 PE=2 SV=2
Length = 239
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 52 DANIIEQGLHANWDSSSSPTIM-----QHANESWGPNSSPDAYAADQTLSAGSFSPAA-A 105
D +E+G H P + H+ S GP++ P + + +P
Sbjct: 14 DLRYLEEGDHGPLQHLDMPGVSPLYDGNHSPLSPGPDNVPSETGGESSGDEHVLAPPGLR 73
Query: 106 ATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQ 165
A G+ K K K ++R ER R K++NE L+ + QR +
Sbjct: 74 AHCEGQCLMWACKVCKRKSAPTDRRKAATLRERRRLKKINEAFDALKRKSVANPNQRLPK 133
Query: 166 ASVIGGSINFVKELEQLLQSMEAQKRNTS 194
++ +I++++ L++LLQS++ Q+R S
Sbjct: 134 VEILRSAISYIERLQELLQSLDEQERGQS 162
>sp|P97831|TWST2_RAT Twist-related protein 2 OS=Rattus norvegicus GN=Twist2 PE=2 SV=2
Length = 160
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 108 TGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQAS 167
T G+R ++ + S+++ EE+++QR+ ER R + +NE A LR ++P + +
Sbjct: 46 TPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQ 105
Query: 168 VIGGSINFVKELEQLLQSMEAQKRNTS 194
+ + ++ L Q+LQS E + TS
Sbjct: 106 TLKLAARYIDFLYQVLQSDEMDNKMTS 132
>sp|Q8WVJ9|TWST2_HUMAN Twist-related protein 2 OS=Homo sapiens GN=TWIST2 PE=1 SV=1
Length = 160
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 108 TGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQAS 167
T G+R ++ + S+++ EE+++QR+ ER R + +NE A LR ++P + +
Sbjct: 46 TPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQ 105
Query: 168 VIGGSINFVKELEQLLQSMEAQKRNTS 194
+ + ++ L Q+LQS E + TS
Sbjct: 106 TLKLAARYIDFLYQVLQSDEMDNKMTS 132
>sp|Q9D030|TWST2_MOUSE Twist-related protein 2 OS=Mus musculus GN=Twist2 PE=1 SV=1
Length = 160
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 108 TGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQAS 167
T G+R ++ + S+++ EE+++QR+ ER R + +NE A LR ++P + +
Sbjct: 46 TPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQ 105
Query: 168 VIGGSINFVKELEQLLQSMEAQKRNTS 194
+ + ++ L Q+LQS E + TS
Sbjct: 106 TLKLAARYIDFLYQVLQSDEMDNKMTS 132
>sp|Q9JK54|MSGN1_MOUSE Mesogenin-1 OS=Mus musculus GN=Msgn1 PE=2 SV=1
Length = 188
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 99 SFSPAAAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAILRSLMPPS 158
+F P T GG + + K SK K ++ +R E+ R + + + L LR+ +PP
Sbjct: 93 AFQPPYLHTAGGLKGQ---KGSKVKMSVQRRRKAS-EREKLRMRTLADALHTLRNYLPPV 148
Query: 159 YVQRGDQASVIGG---SINFVKELEQLLQSMEAQKRNTS 194
Y QRG + I +I ++ EL LL S + R S
Sbjct: 149 YSQRGQPLTKIQTLKYTIKYIGELTDLLNSSGREPRPQS 187
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 38.1 bits (87), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 92 DQTLSAGSFSPAAAATTGGRRKRRRTKSSKNKEEIENQRMTHIAVERNRRKQMNEYLAIL 151
D+ + A G +R + T+S N ++ HI ER RR+++ + L
Sbjct: 93 DEEIGLPEHKKAELIIRGTKRAQSLTRSQSNAQD-------HILAERKRREKLTQRFVAL 145
Query: 152 RSLMPPSYVQRGDQASVIGGSINFVKELEQLLQSMEAQKRNTSQ----LLKAGDNGVSSP 207
+L+P +++ D+ASV+G +I +K L++ ++ E QK+ + L+K SS
Sbjct: 146 SALIP--GLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKK-----SSL 198
Query: 208 FANFFTFPQYSTRSSQSNNLAPDHESSMTENVADIEVNMAESHANIKILTKKRPRQLLKM 267
+ P S+ S + +S + N+ +IEV ++ IKIL +K+ ++K+
Sbjct: 199 VLDENHQPSSSSSSDGN-------RNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKI 251
Query: 268 VASFQNLRLSVLHLNV 283
+ + L LS+ + NV
Sbjct: 252 MGEIEKLGLSITNSNV 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,235,936
Number of Sequences: 539616
Number of extensions: 4563543
Number of successful extensions: 12788
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 12660
Number of HSP's gapped (non-prelim): 214
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)