Your job contains 1 sequence.
>020213
MEISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERK
LPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLL
AFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFI
MGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADG
QIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFFRHGLKKRLELRHRL
LKQRNIYCSLSEMLDCNAKKFLIKFGLFA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020213
(329 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006461 - symbol:MDA1 "AT4G14605" species:37... 295 1.1e-25 1
TAIR|locus:2207420 - symbol:AT1G78930 "AT1G78930" species... 283 4.7e-24 1
TAIR|locus:2049329 - symbol:EMB2219 "embryo defective 221... 276 3.3e-23 1
TAIR|locus:2139394 - symbol:BSM "AT4G02990" species:3702 ... 265 3.3e-22 1
TAIR|locus:2051814 - symbol:AT2G44020 "AT2G44020" species... 253 5.6e-21 1
TAIR|locus:2162092 - symbol:AT5G55580 "AT5G55580" species... 251 8.7e-21 1
TAIR|locus:2087926 - symbol:AT3G18870 "AT3G18870" species... 209 5.3e-17 1
TAIR|locus:2153433 - symbol:PTAC15 "AT5G54180" species:37... 213 2.8e-15 1
TAIR|locus:2062328 - symbol:AT2G34620 "AT2G34620" species... 202 9.3e-15 1
TAIR|locus:2056745 - symbol:EMB93 "EMBRYO DEFECTIVE 93" s... 190 2.2e-13 1
TAIR|locus:2039240 - symbol:EMB3114 "AT2G36000" species:3... 193 2.7e-13 1
TAIR|locus:2177734 - symbol:AT5G64950 "AT5G64950" species... 183 7.9e-12 1
TAIR|locus:2172798 - symbol:AT5G23930 "AT5G23930" species... 136 6.5e-10 2
TAIR|locus:2207265 - symbol:AT1G79220 species:3702 "Arabi... 161 3.2e-09 1
ZFIN|ZDB-GENE-040718-359 - symbol:mterfd1 "MTERF domain c... 151 4.6e-08 1
TAIR|locus:2199612 - symbol:AT1G21150 "AT1G21150" species... 144 2.7e-07 1
TAIR|locus:2036843 - symbol:AT1G61960 "AT1G61960" species... 123 2.8e-07 2
TAIR|locus:2018057 - symbol:AT1G62120 "AT1G62120" species... 141 7.4e-07 1
TAIR|locus:2036813 - symbol:AT1G62010 "AT1G62010" species... 137 1.9e-06 1
TAIR|locus:2010698 - symbol:AT1G56380 "AT1G56380" species... 133 5.1e-06 1
TAIR|locus:1006230704 - symbol:AT1G62085 "AT1G62085" spec... 132 8.5e-06 1
FB|FBgn0037008 - symbol:mTerf3 species:7227 "Drosophila m... 130 8.8e-06 1
TAIR|locus:2037338 - symbol:AT1G74120 "AT1G74120" species... 126 3.8e-05 1
UNIPROTKB|G3V130 - symbol:MTERFD1 "mTERF domain-containin... 123 3.8e-05 1
UNIPROTKB|Q5ZJC8 - symbol:MTERFD1 "mTERF domain-containin... 125 4.2e-05 1
UNIPROTKB|F1P3M7 - symbol:MTERFD1 "mTERF domain-containin... 125 4.2e-05 1
TAIR|locus:2142763 - symbol:AT5G07900 "AT5G07900" species... 123 7.0e-05 1
UNIPROTKB|Q96E29 - symbol:MTERFD1 "mTERF domain-containin... 123 7.4e-05 1
TAIR|locus:2018062 - symbol:AT1G62150 "AT1G62150" species... 123 8.7e-05 1
UNIPROTKB|Q99551 - symbol:MTERF "Transcription terminatio... 122 8.8e-05 1
RGD|735158 - symbol:Mterfd1 "MTERF domain containing 1" s... 121 0.00012 1
UNIPROTKB|E2RL82 - symbol:MTERFD1 "Uncharacterized protei... 121 0.00012 1
MGI|MGI:1913660 - symbol:Mterfd1 "MTERF domain containing... 118 0.00026 1
TAIR|locus:2103291 - symbol:SHOT1 "AT3G60400" species:370... 99 0.00031 2
TAIR|locus:2036868 - symbol:AT1G61980 "AT1G61980" species... 117 0.00035 1
UNIPROTKB|F1RY61 - symbol:MTERFD1 "Uncharacterized protei... 116 0.00044 1
UNIPROTKB|E2RMX2 - symbol:MTERFD3 "Uncharacterized protei... 115 0.00051 1
TAIR|locus:2136902 - symbol:AT4G09620 "AT4G09620" species... 109 0.00065 1
TAIR|locus:2018042 - symbol:AT1G62110 "AT1G62110" species... 114 0.00088 1
>TAIR|locus:505006461 [details] [associations]
symbol:MDA1 "AT4G14605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006970 "response to osmotic
stress" evidence=IMP] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
GO:GO:0009737 EMBL:CP002687 GO:GO:0009651 GO:GO:0009658 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00532745
RefSeq:NP_567435.4 UniGene:At.33263 ProteinModelPortal:F4JVI3
SMR:F4JVI3 PRIDE:F4JVI3 EnsemblPlants:AT4G14605.1 GeneID:827109
KEGG:ath:AT4G14605 OMA:HLVSRLH PhylomeDB:F4JVI3 Uniprot:F4JVI3
Length = 493
Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 69/237 (29%), Positives = 123/237 (51%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS 109
YL +G+ ++ + K L+ K+ P+VE L LG ++ + + + P I
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261
Query: 110 HSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGM 169
S+ + L P +AF + LG+ + Q ++I P +++YS KLT TV+FL+ GL E
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 319
Query: 170 IGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNF 229
IG++L + P IM YSV+++LRPT E+ +S+ + D+ V+ + P+ + L P
Sbjct: 320 IGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV---DVAVLLHRCPQTFGLSIESNLKPVT 376
Query: 230 TFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFF 286
F GF +I +++ Y + S+K ++ P+ + + M E+ +P FF
Sbjct: 377 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFF 432
Score = 240 (89.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 60/226 (26%), Positives = 118/226 (52%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS 109
+L +GI + +P ++ K P+I + L + L P + L TLG + A I+RFP IL+
Sbjct: 238 FLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT 297
Query: 110 HSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGM 169
+S +KL + F G+ E+Q+GR++ P ++SYS+E KL T+++ SL +
Sbjct: 298 YS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVD---- 352
Query: 170 IGKVLVKHPFIMGYSVDNRLRPTSEFL--KSVGLKELDLQVVAVKFPEVLCRDVNKILSP 227
+ +L + P G S+++ L+P +EF K GL E+ + + ++ + + + + P
Sbjct: 353 VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMIS--RYGALYTFSLKENVMP 410
Query: 228 NFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMG 273
+ + + + ++ +P S++ ++PR + LV+ G
Sbjct: 411 KWDYFQTMDYPKSELVK----FPQFFGYSLQERIKPRYE-LVQRSG 451
Score = 194 (73.4 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 54/229 (23%), Positives = 108/229 (47%)
Query: 3 ISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLP 62
IS + N + FL+ G + + R + + + +L G+ E ++
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIG 321
Query: 63 NVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAF 122
++++CP I++ + +KL P +E +L +VA + R P S+E L P+ F
Sbjct: 322 RILTRCPNIMSYSVEDKLRPTMEYFRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEF 378
Query: 123 FQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMG 182
F G ++G MI L ++S++ + D+ ++ + LVK P G
Sbjct: 379 FLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPKSE-----LVKFPQFFG 433
Query: 183 YSVDNRLRPTSEFLKSVGLKELDLQVVA---VKFPEVLCRDVNKILSPN 228
YS+ R++P E ++ G++ L QV++ ++F +V+ + + K++S N
Sbjct: 434 YSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKLVSNN 482
Score = 190 (71.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 57/221 (25%), Positives = 104/221 (47%)
Query: 59 RKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCP 118
RKL VS+ ++ T G L P L LG ++ + +F +S++ K+ P
Sbjct: 179 RKL-RAVSRVSELDTEGA---LRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKP 234
Query: 119 LLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHP 178
++ F LG+P+ + ++ P++ S+ L T+ FL +LG+ + K++ + P
Sbjct: 235 VVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQW-AKIISRFP 293
Query: 179 FIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFA 238
I+ YS +L T EFL GL E + + + P ++ V L P + +
Sbjct: 294 AILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV- 351
Query: 239 DGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEV 279
+A L+ P SI+++L+P +F +E G +DE+
Sbjct: 352 --DVAVLLHRCPQTFGLSIESNLKPVTEFFLE-KGFGLDEI 389
>TAIR|locus:2207420 [details] [associations]
symbol:AT1G78930 "AT1G78930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684
GO:GO:0009507 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AK228193 IPI:IPI00543979 RefSeq:NP_178014.2
UniGene:At.34214 ProteinModelPortal:Q0WRV2 SMR:Q0WRV2 PRIDE:Q0WRV2
EnsemblPlants:AT1G78930.1 GeneID:844232 KEGG:ath:AT1G78930
TAIR:At1g78930 HOGENOM:HOG000084735 InParanoid:Q0WRV2 OMA:PHILGCS
PhylomeDB:Q0WRV2 ProtClustDB:CLSN2680664 Genevestigator:Q0WRV2
Uniprot:Q0WRV2
Length = 591
Score = 283 (104.7 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 76/278 (27%), Positives = 134/278 (48%)
Query: 51 LKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSH 110
++ + ++ + ++ K P IL+ + E + + ++ AI R+P +L
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366
Query: 111 SVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMI 170
S + ++ F LGV +K++G++I P+L+ + L + V FL LG +E ++
Sbjct: 367 SASN-MEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFL-KVVCFLEDLGFQKE-IV 423
Query: 171 GKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFT 230
G++L + P I G S++ L+ FL G+ + K+PE L D +K + P
Sbjct: 424 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 483
Query: 231 FLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFFXXXX 290
+L G ++ +IA ++ + PIL SI L P+ +FLV M + + EV +YP +F
Sbjct: 484 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 543
Query: 291 XXXXXXXXXXXXXXNIYCSLSEMLDCNAKKFLIKF-GL 327
NI C+L EML N ++F F GL
Sbjct: 544 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEFAADFLGL 581
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 63/233 (27%), Positives = 110/233 (47%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVE-CLATLGTKPYEVASAITRFPPIL 108
+L+SIGI + L V+ P I+ LG E++ V + + + + ++P IL
Sbjct: 270 FLESIGIPKYCLGKVLLLYPPIM-LGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWIL 328
Query: 109 SHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREG 168
S S++E + +FF + V + + I P L+ S S + V LG+ R+
Sbjct: 329 SPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGCSA-SNMEMMVKEFDKLGV-RDK 386
Query: 169 MIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGL-KELDLQVVAVKFPEVLCRDVNKILSP 227
+GKV+ K P ++ L+ FL+ +G KE+ Q++ + PE+ + K L
Sbjct: 387 RMGKVIPKMPQLLLCKPQEFLKVVC-FLEDLGFQKEIVGQILC-RCPEIFGCSIEKTLQK 444
Query: 228 NFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVA 280
FL R G + ++ YP LI ++ PR+K+L+E+ G E+A
Sbjct: 445 KLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEI-GISEREIA 496
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 56/238 (23%), Positives = 105/238 (44%)
Query: 51 LKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSH 110
L +G ++ ++ P++L L + PMVE L ++G Y + + +PPI+
Sbjct: 235 LDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLG 294
Query: 111 SVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMI 170
EE + + + V K G+++L P ++S SI+ + F S + + I
Sbjct: 295 KTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMD-I 353
Query: 171 GKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFT 230
+ + P ++G S N EF K +G+++ + V K P++L + L
Sbjct: 354 DHAIRRWPLLLGCSASNMEMMVKEFDK-LGVRDKRMGKVIPKMPQLLLCKPQEFLKV-VC 411
Query: 231 FLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVE--VMGRQIDEVAD-YPDF 285
FL+ GF + ++ P I SI+ +L+ ++ FL V + YP+F
Sbjct: 412 FLEDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEF 469
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 12 VIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADN-WAYLKSIGILERKLPNVVSKCPK 70
V+ FL+D GF + + RC + G ++ +L G+ P ++ K P+
Sbjct: 409 VVCFLEDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPE 468
Query: 71 ILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPE 130
L ++ ++P ++ L +G E+A I +F PIL +S+++ L P F + E
Sbjct: 469 FLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFL--VNSME 526
Query: 131 KQLGRMILLNPRLISYSIESKLTETVDFLTSLGL--AREGMIGK 172
K + R ++ PR SYS+E ++ L + + M+GK
Sbjct: 527 KPV-REVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGK 569
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/171 (22%), Positives = 79/171 (46%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS 109
+L+ +G + + ++ +CP+I + + L + L G I ++P L
Sbjct: 412 FLEDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLI 471
Query: 110 HSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGM 169
+ ++ + P L + +G+ E+++ MI ++ YSI+ L +FL + + E
Sbjct: 472 YDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVN---SMEKP 528
Query: 170 IGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRD 220
+ +V +++P YS++ R++P LK + E LQ + K E D
Sbjct: 529 VREV-IEYPRYFSYSLEKRIKPRFRVLKGRNI-ECTLQEMLGKNDEEFAAD 577
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/184 (22%), Positives = 85/184 (46%)
Query: 73 TLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQ 132
TL EK+ L LG+ + FP +L S E + P++ F +++G+P+
Sbjct: 221 TLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYC 280
Query: 133 LGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPT 192
LG+++LL P ++ E + + + + GK+L+K+P+I+ S+
Sbjct: 281 LGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDS-GKLLLKYPWILSPSIQENYSHI 339
Query: 193 SEFLKSVGLKELDLQVVAVKFPEVL-CRDVN-KILSPNFTFLKRCGFADGQIAALVAAYP 250
F S + ++D+ ++P +L C N +++ F L G D ++ ++ P
Sbjct: 340 GSFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEFDKL---GVRDKRMGKVIPKMP 396
Query: 251 PILI 254
+L+
Sbjct: 397 QLLL 400
>TAIR|locus:2049329 [details] [associations]
symbol:EMB2219 "embryo defective 2219" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] GO:GO:0009506 GO:GO:0009507
EMBL:CP002685 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 IPI:IPI00895653 RefSeq:NP_179763.3 UniGene:At.39539
ProteinModelPortal:F4IHL3 PRIDE:F4IHL3 EnsemblPlants:AT2G21710.1
GeneID:816708 KEGG:ath:AT2G21710 OMA:EMIADFP ArrayExpress:F4IHL3
Uniprot:F4IHL3
Length = 641
Score = 276 (102.2 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 72/313 (23%), Positives = 138/313 (44%)
Query: 10 NSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCP 69
N ++ +L+ G + + RC L + + +G+ + +V P
Sbjct: 282 NEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYP 341
Query: 70 KILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVP 129
KI+ + + + L G EV + P ++ S+EE+ PL+ +F LG+P
Sbjct: 342 KIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIP 401
Query: 130 EKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRL 189
++ + R++++ P L +E + V FL +G+ E IG +LVK P ++ S+ ++
Sbjct: 402 KEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKI 460
Query: 190 RPTSEFLKS-VGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAA 248
RP FL + G+ + D+ V P +L + L PN + G Q+ ++A
Sbjct: 461 RPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIAD 520
Query: 249 YPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFFXXXXXXXXXXXXXXXXXXNIYC 308
+P +L ++ N L P+ ++L M R + ++ ++P FF +
Sbjct: 521 FPMLLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNF 579
Query: 309 SLSEMLDCNAKKF 321
L ML C ++F
Sbjct: 580 KLRYMLACTDEEF 592
Score = 223 (83.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 70/273 (25%), Positives = 129/273 (47%)
Query: 1 MEISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWA-YLKSIGILER 59
+ S + + V +FLK G N M ++ G + + YLK G+
Sbjct: 309 LSFSMEEVKSRVDFFLK-MGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLSTE 367
Query: 60 KLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPIL-SHSVEEKLCP 118
++ +++ P ++ + E+ P+V+ LG P E I PIL +E+ + P
Sbjct: 368 EVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGI-PKEGMKRILVVKPILYCIDLEKTIAP 426
Query: 119 LLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFL-TSLGLAREGMIGKVLVKH 177
+ F Q +G+P + +G M++ P L++ S+ K+ V FL T G+ ++ IGKV+
Sbjct: 427 KVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKD-IGKVIAMD 485
Query: 178 PFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGF 237
P ++G S+ +L P + S+G++ L + FP +L +V+ L P + +L+R
Sbjct: 486 PALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDN-LRPKYRYLRRTMI 544
Query: 238 ADGQIAALVAAYPPILIKSIKNSLEPRIKFLVE 270
Q L+ +P S++ + PR +VE
Sbjct: 545 RPLQ--DLIE-FPRFFSYSLERRIIPRHTIMVE 574
Score = 217 (81.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 50/196 (25%), Positives = 102/196 (52%)
Query: 78 EKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMI 137
E+L +VE L + G + + + R P +LS S+EE + + FF +G+ + G M+
Sbjct: 279 EELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEE-VKSRVDFFLKMGMNQNDFGTMV 337
Query: 138 LLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLK 197
P++I + + + +++L GL+ E +G++L P +MG S++ R +P ++
Sbjct: 338 YDYPKIIGFFSFQVMEKKINYLKEFGLSTEE-VGRLLAYKPHLMGCSIEERWKPLVKYFY 396
Query: 198 SVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSI 257
+G+ + ++ + V P + C D+ K ++P FL+ G + I ++ +P +L S+
Sbjct: 397 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 456
Query: 258 KNSLEPRIKFLVEVMG 273
+ P + FL+ G
Sbjct: 457 YKKIRPVVIFLLTRAG 472
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/192 (21%), Positives = 91/192 (47%)
Query: 83 MVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPR 142
M+E L ++ K +A A R + E+L ++ + ++ GV +G ++ P
Sbjct: 248 MIEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGYVVGRCPE 307
Query: 143 LISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLK 202
L+S+S+E ++ VDF +G+ + G ++ +P I+G+ + +LK GL
Sbjct: 308 LLSFSME-EVKSRVDFFLKMGM-NQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLS 365
Query: 203 ELDL-QVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSL 261
++ +++A K P ++ + + P + G + ++ P + ++ ++
Sbjct: 366 TEEVGRLLAYK-PHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTI 424
Query: 262 EPRIKFLVEVMG 273
P+++FL E MG
Sbjct: 425 APKVRFLQE-MG 435
>TAIR|locus:2139394 [details] [associations]
symbol:BSM "AT4G02990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0009536 "plastid" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0032502 "developmental
process" evidence=IMP] [GO:0042793 "transcription from plastid
promoter" evidence=IMP] [GO:0042794 "rRNA transcription from
plastid promoter" evidence=IMP] GO:GO:0009536 EMBL:CP002687
GO:GO:0008380 GO:GO:0009790 EMBL:AF069442 EMBL:AL161495 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000241428
ProtClustDB:PLN03196 IPI:IPI00547639 PIR:T01394 RefSeq:NP_192208.1
UniGene:At.10877 ProteinModelPortal:Q9ZT96 SMR:Q9ZT96 STRING:Q9ZT96
PRIDE:Q9ZT96 EnsemblPlants:AT4G02990.1 GeneID:828116
KEGG:ath:AT4G02990 TAIR:At4g02990 InParanoid:Q9ZT96 OMA:FPAFFTY
PhylomeDB:Q9ZT96 ArrayExpress:Q9ZT96 Genevestigator:Q9ZT96
GO:GO:0042794 Uniprot:Q9ZT96
Length = 541
Score = 265 (98.3 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 75/321 (23%), Positives = 143/321 (44%)
Query: 4 STSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRL--QGVEKDRAADNWAYLKSIGILERKL 61
S +N V+ +L G T + +R ++ V D A YL+ + I +
Sbjct: 174 SVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVID-LAPVVKYLQGLDIKPSDV 232
Query: 62 PNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLA 121
P V+ + P++L L + V L +G E+ +TR+P IL V + PL+
Sbjct: 233 PRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVE 292
Query: 122 FFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIM 181
+ + LG+P R+I P ++ + ++ + V L + RE + ++ ++P I+
Sbjct: 293 YLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNV-RETSLPSIIAQYPEII 351
Query: 182 GYSVDNRLRPTSEFLKS-VGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADG 240
G + +L + L S + L DL + + P+ + + +L + FL +CGF+
Sbjct: 352 GIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLK-HIDFLTKCGFSID 410
Query: 241 QIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFFXXXXXXXXXXXXXX 300
Q +V P +L ++ ++ ++ + M R + ++ D+P FF
Sbjct: 411 QTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKK 469
Query: 301 XXXXNIYCSLSEMLDCNAKKF 321
I CSL+ ML+C+ +KF
Sbjct: 470 IIKKGIKCSLAWMLNCSDEKF 490
Score = 236 (88.1 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 50/204 (24%), Positives = 106/204 (51%)
Query: 65 VSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQ 124
++ P +L + + +VP+++ L LG + + R+P +L SV L P++ + Q
Sbjct: 164 INNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQ 223
Query: 125 ALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYS 184
L + + R++ P ++ + +E ++ +V +L +G+AR IG +L ++P I+G
Sbjct: 224 GLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARRE-IGGILTRYPEILGMR 282
Query: 185 VDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAA 244
V ++P E+L+ +G+ L + K P +L +++ + PN L+ + + +
Sbjct: 283 VARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPS 342
Query: 245 LVAAYPPILIKSIKNSLEPRIKFL 268
++A YP I+ +K L+ + K L
Sbjct: 343 IIAQYPEIIGIDLKPKLDTQRKLL 366
>TAIR|locus:2051814 [details] [associations]
symbol:AT2G44020 "AT2G44020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004005
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AY039920 EMBL:AY079380 IPI:IPI00516323 PIR:T00682
RefSeq:NP_566005.1 UniGene:At.19499 UniGene:At.71899
ProteinModelPortal:O80572 SMR:O80572 PaxDb:O80572 PRIDE:O80572
EnsemblPlants:AT2G44020.1 GeneID:819007 KEGG:ath:AT2G44020
TAIR:At2g44020 eggNOG:NOG235651 HOGENOM:HOG000241428
InParanoid:O80572 OMA:YFTYSLE PhylomeDB:O80572 ProtClustDB:PLN03196
ArrayExpress:O80572 Genevestigator:O80572 Uniprot:O80572
Length = 507
Score = 253 (94.1 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 68/275 (24%), Positives = 135/275 (49%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS 109
+L+ + + ++ L V+ K P++L L + V L ++G P ++ +T++P +L
Sbjct: 186 FLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLG 245
Query: 110 HSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGM 169
V + PL+ + ++G+P+K + RM+ ++ Y++E + VD L S G+ +E +
Sbjct: 246 MRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKE-L 304
Query: 170 IGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQV---VAVKFPEVLCRDVNKILS 226
+ ++ ++P I+G V ++ T ++ S+ LK +D + V K P+++ N I+
Sbjct: 305 LPLLIAQYPQILGLPVKAKMS-TQQYFFSLKLK-IDPEGFARVVEKMPQIVSLKQNVIMK 362
Query: 227 PNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFF 286
P FL F IA +V P IL ++ ++ F MGR + E+ +YP++F
Sbjct: 363 P-IEFLLGRAFQVEDIAKMVVRCPQILCSRVE-LMKNSYYFYKTEMGRPMKELVEYPEYF 420
Query: 287 XXXXXXXXXXXXXXXXXXNIYCSLSEMLDCNAKKF 321
I SL+ L+C+ ++F
Sbjct: 421 TYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRF 455
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 62/236 (26%), Positives = 127/236 (53%)
Query: 49 AYLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPIL 108
AYL+ IGI KL V P++L + +L P+V+ L L + ++ + ++P +L
Sbjct: 149 AYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELL 208
Query: 109 SHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREG 168
+E + +A+ ++GV + +G M+ P L+ + + + VD+L S+GL ++
Sbjct: 209 GFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKK- 267
Query: 169 MIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVN-KILSP 227
++ ++L K +I+GY+++ ++P + L S G+K+ L ++ ++P++L V K+ +
Sbjct: 268 IVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQ 327
Query: 228 NFTFLKRCGFADGQIAALVAAYPPILIKSIK-NSLEPRIKFLVEVMGR--QIDEVA 280
+ F + A +V P I+ S+K N + I+FL +GR Q++++A
Sbjct: 328 QYFFSLKLKIDPEGFARVVEKMPQIV--SLKQNVIMKPIEFL---LGRAFQVEDIA 378
Score = 217 (81.4 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 47/203 (23%), Positives = 107/203 (52%)
Query: 65 VSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQ 124
+++ P +L + + L+P++ L +G ++ + +P +L SV +L P++ F +
Sbjct: 129 INEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLR 188
Query: 125 ALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYS 184
L V ++ LG +++ P L+ + +E ++ +V +L S+G++ IG ++ ++P+++G
Sbjct: 189 GLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRD-IGPMVTQYPYLLGMR 247
Query: 185 VDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAA 244
V ++P ++L S+GL + + + K ++ ++ + + PN L G +
Sbjct: 248 VGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPL 307
Query: 245 LVAAYPPILIKSIKNSLEPRIKF 267
L+A YP IL +K + + F
Sbjct: 308 LIAQYPQILGLPVKAKMSTQQYF 330
Score = 201 (75.8 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 52/220 (23%), Positives = 111/220 (50%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS 109
YLK +GI+ +L ++ + P + E + VE L LG I +P +L
Sbjct: 89 YLKGLGIITDELESI--ELPSTI-----EVMCERVEFLQKLGL----TIDDINEYPLMLG 137
Query: 110 HSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGM 169
SV + L P+LA+ + +G+ +LG + P+++ S+ +L V FL L + ++ +
Sbjct: 138 CSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDL 197
Query: 170 IGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNF 229
G VL+K+P ++G+ ++ + + +L S+G+ D+ + ++P +L V ++ P
Sbjct: 198 -GYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLV 256
Query: 230 TFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLV 269
+L G +A ++ I+ +++ +++P + L+
Sbjct: 257 DYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLI 296
>TAIR|locus:2162092 [details] [associations]
symbol:AT5G55580 "AT5G55580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0048364 GO:GO:0048367
EMBL:AB009050 eggNOG:NOG246142 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.27411 EMBL:AY062691
EMBL:BT000141 IPI:IPI00542422 RefSeq:NP_200369.1
ProteinModelPortal:Q9FM80 SMR:Q9FM80 PRIDE:Q9FM80
EnsemblPlants:AT5G55580.1 GeneID:835652 KEGG:ath:AT5G55580
TAIR:At5g55580 HOGENOM:HOG000084463 InParanoid:Q9FM80 OMA:RPRHRFL
PhylomeDB:Q9FM80 ProtClustDB:CLSN2686991 ArrayExpress:Q9FM80
Genevestigator:Q9FM80 Uniprot:Q9FM80
Length = 496
Score = 251 (93.4 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 64/259 (24%), Positives = 124/259 (47%)
Query: 15 FLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCPKILTL 74
+L G + M++R + A + YL S+G+ R + ++ + P+IL
Sbjct: 190 YLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQY 249
Query: 75 GLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFF-QALGVPEKQL 133
+ L + L LG ++ + P + S+SVE L P + + + +G+ E +
Sbjct: 250 TVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDV 309
Query: 134 GRMILLNPRLISYSIESKLTETVDFLTS-LGLAREGMIGKVLVKHPFIMGYSVDNRLRPT 192
G+++ L+P+++ ++ FL+ LG R+ ++ K++ KHP ++ YS+D+ P
Sbjct: 310 GKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVV-KMVKKHPQLLHYSIDDGFLPR 368
Query: 193 SEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPI 252
FL+S+G+ D+ V +VL + L P + +L + ++ L YP
Sbjct: 369 INFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYL--VNELNNEVHILTK-YPMY 425
Query: 253 LIKSIKNSLEPRIKFLVEV 271
L S+ + PR +FLVE+
Sbjct: 426 LSLSLDQRIRPRHRFLVEL 444
Score = 248 (92.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 62/200 (31%), Positives = 105/200 (52%)
Query: 74 LGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS---HSVEEKLCPLLAFFQALGVPE 130
+ ++ K VP+++ L+T G K R P L S +E+L LL+ +GV
Sbjct: 178 IDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLS----VGVKH 233
Query: 131 KQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLR 190
+ + RM+L P+++ Y++E+ L + FL LG+ IG+++ P + YSV+N LR
Sbjct: 234 RDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNS-KIGQIVAATPSLFSYSVENSLR 292
Query: 191 PTSEFL-KSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFL-KRCGFADGQIAALVAA 248
PT +L + VG+KE D+ V P++L + ++ + + FL K G + +V
Sbjct: 293 PTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKK 352
Query: 249 YPPILIKSIKNSLEPRIKFL 268
+P +L SI + PRI FL
Sbjct: 353 HPQLLHYSIDDGFLPRINFL 372
Score = 229 (85.7 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 60/239 (25%), Positives = 117/239 (48%)
Query: 50 YLKSIGILERKLPNVVSK-CP--KILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPP 106
YL + G+ E + + P +I E+L + L ++G K ++ + R P
Sbjct: 190 YLSTFGLKESHFVQMYERHMPSLQINVFSAQERL----DYLLSVGVKHRDIKRMLLRQPQ 245
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTS-LGLA 165
IL ++VE L ++F LG+P ++G+++ P L SYS+E+ L T+ +L +G+
Sbjct: 246 ILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGI- 304
Query: 166 REGMIGKVLVKHPFIMGYSVDNRLRPTSEFL-KSVGLKELDLQVVAVKFPEVLCRDVNKI 224
+E +GKV+ P I+ +D FL K +G + + K P++L ++
Sbjct: 305 KETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDG 364
Query: 225 LSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
P FL+ G + I ++ + +L S++++L+P+ +LV + ++ + YP
Sbjct: 365 FLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYP 423
>TAIR|locus:2087926 [details] [associations]
symbol:AT3G18870 "AT3G18870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016556 "mRNA modification" evidence=RCA]
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002039
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000239190 EMBL:BT029467 IPI:IPI00540238
RefSeq:NP_188517.1 UniGene:At.21618 UniGene:At.71275
ProteinModelPortal:Q9LHN2 SMR:Q9LHN2 EnsemblPlants:AT3G18870.1
GeneID:821420 KEGG:ath:AT3G18870 TAIR:At3g18870 eggNOG:NOG268043
InParanoid:Q9LHN2 OMA:PAIFGYS PhylomeDB:Q9LHN2
ProtClustDB:CLSN2684540 Genevestigator:Q9LHN2 Uniprot:Q9LHN2
Length = 274
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 73/241 (30%), Positives = 113/241 (46%)
Query: 87 LATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISY 146
L++LG P A PP SV LL ++ G+ ++ R++ L P+L S
Sbjct: 43 LSSLGIVPQNPRLA----PPANDLSVILSAVNLL---KSKGISDEDFPRLVFLCPQLFSP 95
Query: 147 SIE-SKLTETVDFLTS-LGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKEL 204
+ + SKL DFLT LG + E G ++V P I+ V+ LRPT +LK +G++ L
Sbjct: 96 TFDISKLDPVFDFLTGELGASAEESRG-LIVNCPNILFSDVEYCLRPTLVYLKELGVRNL 154
Query: 205 DLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPR 264
+ + VL V K L FLK GF + A + P I S++++L P+
Sbjct: 155 NR--ASKTNAHVLNTRVEK-LRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPK 211
Query: 265 IKFLVEVMGRQIDEVADYPDFFXXXXXXXXXXXXXXXXXXNIYCSLSEMLDCNAKKFLIK 324
+FLV M R+++E+ +P +F N+ SLS ML +KF K
Sbjct: 212 FEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSK 271
Query: 325 F 325
+
Sbjct: 272 W 272
Score = 191 (72.3 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 62/186 (33%), Positives = 90/186 (48%)
Query: 51 LKSIGILERKLPNVVSKCPKILTLGLN-EKLVPMVECLA-TLGTKPYEVASAITRFPPIL 108
LKS GI + P +V CP++ + + KL P+ + L LG E I P IL
Sbjct: 72 LKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNIL 131
Query: 109 SHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREG 168
VE L P L + + LGV + L R N +++ +E KL + FL S+G E
Sbjct: 132 FSDVEYCLRPTLVYLKELGV--RNLNRASKTNAHVLNTRVE-KLRAKMRFLKSIGFEHEE 188
Query: 169 MIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPN 228
+V + P I GYSV++ LRP EFL V E +L+ + KFP+ + K + P
Sbjct: 189 A-ARVCGRIPAIFGYSVEDNLRPKFEFL--VYDMERELEELK-KFPQYFAFSLGKRIRPR 244
Query: 229 FTFLKR 234
LK+
Sbjct: 245 HWHLKK 250
>TAIR|locus:2153433 [details] [associations]
symbol:PTAC15 "AT5G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] EMBL:CP002688 GO:GO:0009507
EMBL:AB013387 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
GO:GO:0009508 EMBL:AY081343 EMBL:BT000254 IPI:IPI00519701
RefSeq:NP_200229.1 UniGene:At.29509 ProteinModelPortal:Q9FK23
PRIDE:Q9FK23 EnsemblPlants:AT5G54180.1 GeneID:835506
KEGG:ath:AT5G54180 TAIR:At5g54180 InParanoid:Q9FK23 OMA:DNIEMIC
PhylomeDB:Q9FK23 ProtClustDB:CLSN2686733 ArrayExpress:Q9FK23
Genevestigator:Q9FK23 Uniprot:Q9FK23
Length = 500
Score = 213 (80.0 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 70/250 (28%), Positives = 126/250 (50%)
Query: 50 YLKSIGILERKL----P----NVVSKCPKILTLGLNEKLVPMVECLATL-GTKPYEVASA 100
Y KS+ +ER + P ++++ P IL L+ +L+P V+ + L G + +
Sbjct: 212 YQKSVEDIERLISFLEPFGGIGIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTV 271
Query: 101 ITRFPPILSHSVEEKLCPLLAFFQAL-GVPEKQLGRMILLNPRLISYSIESKLTETVDFL 159
+ R P ILS+SVE + + F ++ G+ +Q+ +++ + P +IS S E KL ++FL
Sbjct: 272 LRRLPAILSYSVEH-MNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFL 330
Query: 160 TSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLK----ELDLQVVAVKFPE 215
G GM K L K P I+ S +N L FL +G K EL + AV
Sbjct: 331 KECGFDSPGMF-KFLSKAPLILALS-ENNLSHKLGFLVKIGYKHRTKELAFAMGAVT--R 386
Query: 216 VLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQ 275
++ +++ ++ G + I A+ +P +L + SLE ++++L+E MGR+
Sbjct: 387 TSSDNMQRVIGLYLSY----GLSFEDILAMSTKHPQVLQYNY-TSLEEKLEYLIEYMGRE 441
Query: 276 IDEVADYPDF 285
++E+ +P F
Sbjct: 442 VEELLAFPAF 451
Score = 165 (63.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 60/221 (27%), Positives = 106/221 (47%)
Query: 57 LERKL-PNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITR--FPPILSHSVE 113
LE +L P +V + ++ + V L G +++ + + +L
Sbjct: 157 LEGRLDPELVERLLSVVDTSILLSFNQKVRLLLLHGIPKEKISHVLNKVYLNKLLYQKSV 216
Query: 114 EKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKV 173
E + L++F + G +G +I P +++ ++S+L VDF+ +L + G V
Sbjct: 217 EDIERLISFLEPFG----GIG-IIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTV 271
Query: 174 LVKHPFIMGYSVDNRLRPTSEFLKS-VGL-KELDLQVVAVKFPEVLCRDVNKILSPNFTF 231
L + P I+ YSV++ + EFLKS GL E ++V V FP V+ + L P F
Sbjct: 272 LRRLPAILSYSVEH-MNGQVEFLKSFAGLTSEQVFKIVHV-FPNVISTSKERKLRPRIEF 329
Query: 232 LKRCGF-ADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEV 271
LK CGF + G L A P+++ +N+L ++ FLV++
Sbjct: 330 LKECGFDSPGMFKFLSKA--PLILALSENNLSHKLGFLVKI 368
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/272 (22%), Positives = 123/272 (45%)
Query: 3 ISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLP 62
I + S+ +D GF + + + ++ D+ A L+S+ I L
Sbjct: 72 IESGSQIESLFSLFRDIGFIEEETEMILAKNPDIKSTSLDKIGARVASLQSLKINGFPLQ 131
Query: 63 NVVSKCPKILTLGLNEKLVPMV--ECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLL 120
+++KCP +LT + ++ + E L + E ++ +LS + + +L LL
Sbjct: 132 GLIAKCPNLLTSEEFDLVISFLVDELEGRLDPELVERLLSVVDTSILLSFNQKVRL--LL 189
Query: 121 AFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFI 180
G+P++++ + LN ++ + K E ++ L S L G IG ++ + P I
Sbjct: 190 LH----GIPKEKISHV--LNKVYLNKLLYQKSVEDIERLISF-LEPFGGIG-IIARRPVI 241
Query: 181 MGYSVDNRLRPTSEFLKSV-GLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKR-CGFA 238
+ +D++L P +F++++ G + V + P +L V ++ FLK G
Sbjct: 242 LNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVEH-MNGQVEFLKSFAGLT 300
Query: 239 DGQIAALVAAYPPILIKSIKNSLEPRIKFLVE 270
Q+ +V +P ++ S + L PRI+FL E
Sbjct: 301 SEQVFKIVHVFPNVISTSKERKLRPRIEFLKE 332
>TAIR|locus:2062328 [details] [associations]
symbol:AT2G34620 "AT2G34620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004077 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545404
PIR:H84758 RefSeq:NP_181009.1 UniGene:At.37779
ProteinModelPortal:O64685 SMR:O64685 STRING:O64685 PaxDb:O64685
PRIDE:O64685 EnsemblPlants:AT2G34620.1 GeneID:818027
KEGG:ath:AT2G34620 TAIR:At2g34620 eggNOG:NOG301834
HOGENOM:HOG000239190 InParanoid:O64685 OMA:RCPALFT PhylomeDB:O64685
ProtClustDB:CLSN2683649 Genevestigator:O64685 Uniprot:O64685
Length = 303
Score = 202 (76.2 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 54/216 (25%), Positives = 116/216 (53%)
Query: 72 LTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEK 131
+TL + EK++ CL +G + A++ P + S ++ + +L F Q+ G+
Sbjct: 51 VTLQMKEKIL----CLELMGI---DSGKALSLNPCLCSAPLDS-IQSVLHFLQSKGIYPN 102
Query: 132 QLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRP 191
L R++ + P++++ + ++L FL++ E +V+ K P ++ SV+++L+P
Sbjct: 103 DLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKP 162
Query: 192 TSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPP 251
+L+ +GLK DL+ +A + P +L V L P FL+ GF+ + ++ P
Sbjct: 163 ALFYLQRLGLK--DLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPA 220
Query: 252 ILIKSIKNSLEPRIK-FLVEVMGRQIDEVADYPDFF 286
+ SI+N+ +P++ F+ E+ G+ ++ + ++P +F
Sbjct: 221 LFTFSIENNFKPKLDYFMSEIKGK-LENLKEFPQYF 255
Score = 193 (73.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLAT-LGTKPYEVASAITRFPPIL 108
+L+S GI LP ++ CPKILT + +L P+ L+ L I + P +L
Sbjct: 93 FLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLL 152
Query: 109 SHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREG 168
SVE++L P L + Q LG+ K L + +P L+ S+E L + FL S+G +R
Sbjct: 153 ISSVEDQLKPALFYLQRLGL--KDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPE 210
Query: 169 MIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVK-FPEVLCRDVNKILSP 227
IG +L + P + +S++N +P ++ S E+ ++ +K FP+ + K + P
Sbjct: 211 AIGMIL-RCPALFTFSIENNFKPKLDYFMS----EIKGKLENLKEFPQYFAFSLEKRIKP 265
>TAIR|locus:2056745 [details] [associations]
symbol:EMB93 "EMBRYO DEFECTIVE 93" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0071452 "cellular
response to singlet oxygen" evidence=IGI] GO:GO:0009507
EMBL:CP002685 GO:GO:0009793 GO:GO:0071452 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY219044
EMBL:AY649248 IPI:IPI00531063 RefSeq:NP_178405.2 UniGene:At.41435
ProteinModelPortal:Q84X53 SMR:Q84X53 PRIDE:Q84X53
EnsemblPlants:AT2G03050.1 GeneID:814834 KEGG:ath:AT2G03050
TAIR:At2g03050 InParanoid:Q84X53 OMA:ELAEFPH PhylomeDB:Q84X53
ProtClustDB:CLSN2681137 Genevestigator:Q84X53 Uniprot:Q84X53
Length = 283
Score = 190 (71.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 55/220 (25%), Positives = 101/220 (45%)
Query: 103 RFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSL 162
R P L + + + + G+ +GR++ + P L++ ES++ + FL++
Sbjct: 51 RVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNE 110
Query: 163 GLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVN 222
E I K + + P ++ SVD +LRP FLK++G D + + +L +V
Sbjct: 111 ISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRD--TITSRNTVLLVSNVE 168
Query: 223 KILSPNFTFLKR-CGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVAD 281
+ L P +L+ GF ++A +V P +L S+ N+L P+++F +E M + E+
Sbjct: 169 RTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKR 228
Query: 282 YPDFFXXXXXXXXXXXXXXXXXXNIYCSLSEMLDCNAKKF 321
+P +F I LSEML + +F
Sbjct: 229 FPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268
Score = 171 (65.3 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 52/191 (27%), Positives = 94/191 (49%)
Query: 51 LKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLAT-LGTKPYEVASAITRFPPILS 109
L S G+ + ++ P +LT +++P++ L+ + ++ +I+R P +L
Sbjct: 71 LSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLI 130
Query: 110 HSVEEKLCPLLAFFQALGVPEKQLGRMILL--NPRLISYSIESKLTETVDFLTS-LGLAR 166
SV+ +L P L F + LG +GR + N L+ ++E L +++L LG R
Sbjct: 131 SSVDYQLRPALTFLKTLGF----VGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTR 186
Query: 167 EGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVK-FPEVLCRDVNKIL 225
E + K++V+ P ++ YSVDN L P EF ++E+ V +K FP+ + + +
Sbjct: 187 EE-VAKMVVRSPALLTYSVDNNLVPKVEFF----IEEMRGDVKELKRFPQYFSFSLERKI 241
Query: 226 SPNFTFLKRCG 236
P LK G
Sbjct: 242 KPRHRLLKEHG 252
Score = 163 (62.4 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 39/149 (26%), Positives = 79/149 (53%)
Query: 54 IGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVE 113
I I E+ +P +S+CP++L ++ +L P + L TLG + ++ R +L +VE
Sbjct: 111 ISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS--RNTVLLVSNVE 168
Query: 114 EKLCPLLAFFQ-ALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGK 172
L P + + + LG +++ +M++ +P L++YS+++ L V+F G + K
Sbjct: 169 RTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIE---EMRGDV-K 224
Query: 173 VLVKHPFIMGYSVDNRLRPTSEFLKSVGL 201
L + P +S++ +++P LK G+
Sbjct: 225 ELKRFPQYFSFSLERKIKPRHRLLKEHGI 253
Score = 131 (51.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 44/193 (22%), Positives = 87/193 (45%)
Query: 80 LVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQ-ALGVPEKQLGRMIL 138
+V + L++ G V + FP +L+ E ++ P+L F + + E+ + + I
Sbjct: 64 VVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSIS 123
Query: 139 LNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKS 198
PRL+ S++ +L + FL +LG I ++ ++ +V+ L P E+L+
Sbjct: 124 RCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS---RNTVLLVSNVERTLIPKIEYLEE 180
Query: 199 -VGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSI 257
+G ++ + V+ P +L V+ L P F G + L +P S+
Sbjct: 181 GLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIE--EMRGDVKEL-KRFPQYFSFSL 237
Query: 258 KNSLEPRIKFLVE 270
+ ++PR + L E
Sbjct: 238 ERKIKPRHRLLKE 250
>TAIR|locus:2039240 [details] [associations]
symbol:EMB3114 "AT2G36000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY039871
EMBL:AY039888 EMBL:AY077666 IPI:IPI00529913 PIR:F84775
RefSeq:NP_850257.1 UniGene:At.21750 ProteinModelPortal:Q9SJ50
EnsemblPlants:AT2G36000.1 GeneID:818173 KEGG:ath:AT2G36000
TAIR:At2g36000 HOGENOM:HOG000149144 InParanoid:Q9SJ50 OMA:PTLYFLQ
PhylomeDB:Q9SJ50 ProtClustDB:CLSN2680066 Genevestigator:Q9SJ50
Uniprot:Q9SJ50
Length = 333
Score = 193 (73.0 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 59/231 (25%), Positives = 109/231 (47%)
Query: 60 KLPNVVSKCPKILTLGLNEKLVPMV-ECLATLGTKPYEVASAITRFPPILSHSVE--EKL 116
K P++ S T E L + E L L + + + I R PP+LS ++ E +
Sbjct: 49 KSPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESV 108
Query: 117 CPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLT-SLGLAREGMIGKVLV 175
+ + + R++ + P L++ + S + FL +G+ + + L
Sbjct: 109 VDYMTT-PPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALR 167
Query: 176 KHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRC 235
+ P ++ SVD++LRPT FL+ +G+ LD K +L V+ L P + ++
Sbjct: 168 RRPRLLACSVDHQLRPTLYFLQRIGI--LDPH----KHTYLLSCSVDNKLVPRIDYFEKL 221
Query: 236 GFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFF 286
GF+ A+ +P + SI + EP++K+L+ MGR + EV ++P +F
Sbjct: 222 GFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYF 272
Score = 113 (44.8 bits), Expect = 0.00066, P = 0.00066
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 51 LKSIGILER-KLPNVVSKCPKILTLGLNEKLVPMVECLATLGT-KPYEVASAITRFPPIL 108
L+ +G+ L + + P++L ++ +L P + L +G P+ + +L
Sbjct: 151 LREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH-------KHTYLL 203
Query: 109 SHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREG 168
S SV+ KL P + +F+ LG + M P+L +YSI + +L + + R+
Sbjct: 204 SCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLM-VEMGRD- 261
Query: 169 MIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKI 224
+ +VL + P +S++NR++P E + G++ L V+ +K E RD ++
Sbjct: 262 -VREVL-EFPQYFSFSLENRIKPRHEACAAKGVR-FPLPVM-LKTNEAGFRDTLEV 313
>TAIR|locus:2177734 [details] [associations]
symbol:AT5G64950 "AT5G64950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB019236 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545204
RefSeq:NP_201300.1 UniGene:At.28929 ProteinModelPortal:Q9LV83
EnsemblPlants:AT5G64950.1 GeneID:836619 KEGG:ath:AT5G64950
TAIR:At5g64950 InParanoid:Q9LV83 OMA:MSEFLIT PhylomeDB:Q9LV83
ProtClustDB:CLSN2686446 Genevestigator:Q9LV83 Uniprot:Q9LV83
Length = 391
Score = 183 (69.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 84 VECLATLG-TKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPR 142
VE L G KP +A A+ R+P + S+E+ ++ ++ + Q+ + I ++PR
Sbjct: 42 VEFLRDNGFQKPLAIAIAM-RYPNL--KSLEQPRS-VIQMLKSYSFSDTQIQKSIRVHPR 97
Query: 143 LISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKS-VGL 201
++ Y++E L + F +G G+ GK + ++ ++G S+ +L PT E LKS V
Sbjct: 98 MMFYNVEKILEPKLRFFKDIGFTGSGL-GKFVSQNSSVVGVSLVKKLIPTVEILKSIVAP 156
Query: 202 KELDLQVVAVKFPEVLC-RDVNKILSPNFTFLKRCGFADGQIAALVAAYPPI 252
K DL V+ + +L RD N L PN ++L+ CG Q+A+L+ P I
Sbjct: 157 KHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRI 208
Score = 141 (54.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 67/272 (24%), Positives = 119/272 (43%)
Query: 3 ISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAAD-NWAYLKSIGILERKL 61
+ + + SVI LK F+D I + R+ ++ + + K IG L
Sbjct: 65 LKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGL 124
Query: 62 PNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAI-TRFP-PILSHSVEEKLCPL 119
VS+ ++ + L +KL+P VE L ++ +E I +R +LS L P
Sbjct: 125 GKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPN 184
Query: 120 LAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPF 179
+++ + G+ QL ++ PR+ + S E KL V LG + ++LV H
Sbjct: 185 ISYLETCGIVGSQLASLLRRQPRIFNLS-EEKLRGYVSRALDLGFT---LNSRMLV-HAV 239
Query: 180 IMGYSVDNRL--RPTSEFLKSVGLKELDLQVVAVKFPEVL-CRDVNKILSPNFTFLKRCG 236
I S+ + R F+ + G E ++ + + P ++ C + L F +LKR G
Sbjct: 240 ISLSSLSEKTFDRKVKLFMAN-GFSEDEITDIIRRSPGLIRCSEDKLTLGFEF-YLKRMG 297
Query: 237 FADGQIAALVAAYPPILIKSIKNSLEPRIKFL 268
+ AL A P +L +++ + PR+K L
Sbjct: 298 L---EREAL-AKRPCVLSYNLEKRVIPRLKVL 325
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 49/163 (30%), Positives = 80/163 (49%)
Query: 47 NWAYLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPP 106
N +YL++ GI+ +L +++ + P+I L EKL V LG + + S +
Sbjct: 184 NISYLETCGIVGSQLASLLRRQPRIFNLS-EEKLRGYVSRALDLG---FTLNSRMLVHAV 239
Query: 107 ILSHSVEEKLCPL-LAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDF-LTSLGL 164
I S+ EK + F A G E ++ +I +P LI S E KLT +F L +GL
Sbjct: 240 ISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCS-EDKLTLGFEFYLKRMGL 298
Query: 165 AREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQ 207
RE L K P ++ Y+++ R+ P + L+ + K L L+
Sbjct: 299 EREA-----LAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLK 336
>TAIR|locus:2172798 [details] [associations]
symbol:AT5G23930 "AT5G23930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005244
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 IPI:IPI00546759
RefSeq:NP_197781.1 UniGene:At.65544 ProteinModelPortal:Q9FF87
PaxDb:Q9FF87 PRIDE:Q9FF87 ProMEX:Q9FF87 EnsemblPlants:AT5G23930.1
GeneID:832458 KEGG:ath:AT5G23930 TAIR:At5g23930 eggNOG:NOG273152
InParanoid:Q9FF87 OMA:MKANFDE PhylomeDB:Q9FF87
Genevestigator:Q9FF87 Uniprot:Q9FF87
Length = 457
Score = 136 (52.9 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 139 LNPRLISYSIESK-LTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLK 197
+N + Y + K + E V+ LGL+ + V K PF + YS N ++ E LK
Sbjct: 241 VNALYVFYELSDKTIEEKVNAYIRLGLS-VNEVWAVFKKWPFSLKYSEKNIIQKF-ETLK 298
Query: 198 SVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSI 257
VGL + ++ +V K+PE + KI+ TFL+ GF ++ ++ +P I
Sbjct: 299 RVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFLE-LGFTKDEVLMIIKRHPQC-IGLA 356
Query: 258 KNSLEPRIKFLVEVMGRQIDEVADYP 283
+S++ + +FLV+ MG + VA P
Sbjct: 357 ADSVKKKTEFLVKTMGWPLKVVASTP 382
Score = 75 (31.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 1 MEISTSQNGN--SVIWFLKDRGFNDRTIHDMFKRCKR--LQGVEKDRAADNWAYLKSIGI 56
M+ + + GN SV+ L+ GF D I + R ++ EK A +LK G
Sbjct: 77 MKANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRA-KLHFLKLNGA 135
Query: 57 LERKLPNVVSKCPKIL 72
+L +VSK PKIL
Sbjct: 136 SSSELTEIVSKVPKIL 151
Score = 67 (28.6 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 27/108 (25%), Positives = 51/108 (47%)
Query: 40 EKDRAADNWAYL-KSIGILERKLPNVVSKCPKILTLGLNEKLVP--MVECLATLGTKPYE 96
E+ R +YL S+G L KL +S + +EK P +++ L + G K +
Sbjct: 50 ERKRKTFTVSYLIDSLG-LTTKLAESIS-----MKANFDEKGNPDSVLKLLRSYGFKDSQ 103
Query: 97 VASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLI 144
++S I+ +P L + E+ L L F + G +L ++ P+++
Sbjct: 104 ISSIISTYPRFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKIL 151
>TAIR|locus:2207265 [details] [associations]
symbol:AT1G79220 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC002986 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545922
PIR:T01035 RefSeq:NP_565202.1 UniGene:At.34152
ProteinModelPortal:O64531 EnsemblPlants:AT1G79220.1 GeneID:844263
KEGG:ath:AT1G79220 TAIR:At1g79220 eggNOG:NOG329730
HOGENOM:HOG000114992 InParanoid:O64531 OMA:KVQRNMT PhylomeDB:O64531
ProtClustDB:CLSN2689322 Genevestigator:O64531 Uniprot:O64531
Length = 399
Score = 161 (61.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 62/266 (23%), Positives = 125/266 (46%)
Query: 10 NSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCP 69
+S + L+ G +D I +F R LQ + + LK +GI L +++ P
Sbjct: 81 SSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLVKILNCRP 140
Query: 70 KILT--LGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALG 127
+ + L L+E++ +E L G+K + I R P ++ + +++K+ P + +++ LG
Sbjct: 141 RFFSCRLVLDERINYFMEIL---GSKEV-LRRVIIRNPSLMLYDLDDKIKPAIEYYKGLG 196
Query: 128 VPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDN 187
++ L M++ P LI + + E +++ G+ RE + K + I+G S
Sbjct: 197 FSQQDLVAMLISRPTLIPRTNFNN--EKFEYIEKTGVTRESKMFKYVA---VIIGVSRME 251
Query: 188 RLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAA-LV 246
+ L+ G E ++ + K P +L V K+ N TF+ A ++ A V
Sbjct: 252 TIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKV-QRNMTFV----IASMKLPAHSV 306
Query: 247 AAYPPILIKSIKNSLEPRIKFLVEVM 272
+P +L+ ++++ L+PR + V+
Sbjct: 307 VKHPCLLLLNLESRLKPRADLVKRVL 332
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/197 (21%), Positives = 97/197 (49%)
Query: 84 VECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRL 143
++ L G E++ TR P + +V + L L+ + LG+ L +++ PR
Sbjct: 84 LQVLRRWGCDDDEISKLFTRRPALQRANVAQ-LEFKLSLLKPLGITSSDLVKILNCRPRF 142
Query: 144 ISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKE 203
+S L E +++ + L + ++ +V++++P +M Y +D++++P E+ K +G +
Sbjct: 143 --FSCRLVLDERINYFMEI-LGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEYYKGLGFSQ 199
Query: 204 LDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFA-DGQIAALVAAYPPILIKSIKNSLE 262
DL + + P ++ R + F ++++ G + ++ VA I+ S ++E
Sbjct: 200 QDLVAMLISRPTLIPR--TNFNNEKFEYIEKTGVTRESKMFKYVAV---IIGVSRMETIE 254
Query: 263 PRIKFLVEVMGRQIDEV 279
+++ L E G +E+
Sbjct: 255 EKVRNL-EKFGFSEEEI 270
>ZFIN|ZDB-GENE-040718-359 [details] [associations]
symbol:mterfd1 "MTERF domain containing 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] ZFIN:ZDB-GENE-040718-359 CTD:51001 HOVERGEN:HBG062577
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:BC075975 IPI:IPI00510144 RefSeq:NP_001002615.1
UniGene:Dr.161828 GeneID:436888 KEGG:dre:436888 InParanoid:Q6DHJ7
NextBio:20831315 Uniprot:Q6DHJ7
Length = 402
Score = 151 (58.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 53/209 (25%), Positives = 96/209 (45%)
Query: 79 KLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMIL 138
KLV + L L +P V S + R + + P L F + LGV E LGR++
Sbjct: 143 KLVQLGVNLWDLEQRP-NVGSMLVRL------DFQADVAPRLLFLRDLGVEESTLGRLLT 195
Query: 139 LNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSV---DNRLRPTSEF 195
NP +++ S+++ L V +L S + + + ++ K P+++ +SV DNRL F
Sbjct: 196 KNPFILTESLDN-LQARVSYLKSKKFSAQS-VAAMVTKAPYLLNFSVERLDNRL---GFF 250
Query: 196 LKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLK-RCGFADGQIAALVAAYPPILI 254
+ +GL + + + P++LC + + N + GF +I +V+ P +L+
Sbjct: 251 QQQLGLSAEKTRYLVTRLPKLLCGSLEPV-KENLKVCELEFGFRGNEIQHIVSTVPKVLL 309
Query: 255 KSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
+ K L F+ M +A +P
Sbjct: 310 AN-KRKLTQIFDFVHNTMNIPHSLIAKFP 337
>TAIR|locus:2199612 [details] [associations]
symbol:AT1G21150 "AT1G21150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AC012190
IPI:IPI00537251 RefSeq:NP_173539.1 UniGene:At.66877
ProteinModelPortal:Q3ED83 PaxDb:Q3ED83 PRIDE:Q3ED83
EnsemblPlants:AT1G21150.1 GeneID:838711 KEGG:ath:AT1G21150
TAIR:At1g21150 eggNOG:NOG266402 HOGENOM:HOG000093133
InParanoid:Q3ED83 OMA:LIPCYDS PhylomeDB:Q3ED83
ProtClustDB:CLSN2912662 Genevestigator:Q3ED83 Uniprot:Q3ED83
Length = 390
Score = 144 (55.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/266 (19%), Positives = 115/266 (43%)
Query: 1 MEISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVE-KDRAADNWAYLKSIGILER 59
+++ +S+ +SV+ KD GF + I + K R+ + +D + + SIG
Sbjct: 80 VKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTS 139
Query: 60 KLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPL 119
++S PK+L+ L+++L+P + L ++ + V + R S + +
Sbjct: 140 DTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLR 199
Query: 120 LAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPF 179
++ + LGVP+K + ++ +P +S E + E ++ + S G + G V H
Sbjct: 200 VSICRELGVPDKSIKWLVQASP-FTFFSRERRFNEVLNRVCSYGFDPK-KAGFV---HAM 254
Query: 180 I-MGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFA 238
+ + ++ + + + G + D ++FP + KI+ + G
Sbjct: 255 VAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQ 314
Query: 239 DGQIAALVAAYPPILIKSIKNSLEPR 264
A + A P +L S++ ++PR
Sbjct: 315 ----ARDIVARPVVLSLSMEKRIKPR 336
>TAIR|locus:2036843 [details] [associations]
symbol:AT1G61960 "AT1G61960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004392
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT028981
IPI:IPI00521152 PIR:T02140 RefSeq:NP_176387.1 UniGene:At.36342
ProteinModelPortal:O80701 PaxDb:O80701 PRIDE:O80701
EnsemblPlants:AT1G61960.1 GeneID:842491 KEGG:ath:AT1G61960
TAIR:At1g61960 eggNOG:NOG329656 InParanoid:O80701 OMA:ITHTFET
PhylomeDB:O80701 Genevestigator:O80701 Uniprot:O80701
Length = 457
Score = 123 (48.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 37/144 (25%), Positives = 69/144 (47%)
Query: 144 ISYSIESK-LTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLK 202
+ Y + K + E V+ LG + + K P + YS + ++ T E LKS GL
Sbjct: 249 VIYRMSDKTIEEKVNVYKRLGFGVAD-VWAIFKKWPSFLSYS-EKKITHTFETLKSCGLL 306
Query: 203 ELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLE 262
+ ++ ++ K P+ +C KI++ TFL GF+ + A +V YP I +++
Sbjct: 307 KHEVLLLLKKHPKCICSSEQKIVNSIETFLG-LGFSRDEFAMMVKRYPQC-IDYTAETVK 364
Query: 263 PRIKFLVEVMGRQIDEVADYPDFF 286
+ +F+V+ M ++ + P F
Sbjct: 365 KKTEFIVKNMNWPLEALVSIPQVF 388
Score = 104 (41.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 34/141 (24%), Positives = 61/141 (43%)
Query: 64 VVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFF 123
+ K P L+ +K+ E L + G +EV + + P + S E+K+ + F
Sbjct: 278 IFKKWPSFLSYS-EKKITHTFETLKSCGLLKHEVLLLLKKHPKCICSS-EQKIVNSIETF 335
Query: 124 QALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGY 183
LG + M+ P+ I Y+ E+ +T + ++ E LV P + GY
Sbjct: 336 LGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEA-----LVSIPQVFGY 390
Query: 184 SVDNRLRPTSEFLKSVGLKEL 204
S++ R P +K++ K L
Sbjct: 391 SLEKRTVPRCNVIKTLISKGL 411
Score = 64 (27.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 7 QNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRA-ADNWAYLKSIGILERKLPNVV 65
+N +SV+ L GF I + RL ++ +++ A L+S G +L +V
Sbjct: 82 RNPDSVLSLLTSYGFTKSQISSIITIYPRLLALDAEKSIAPKLQSLQSRGASSSELTQIV 141
Query: 66 SKCPKIL 72
S PKIL
Sbjct: 142 STVPKIL 148
>TAIR|locus:2018057 [details] [associations]
symbol:AT1G62120 "AT1G62120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT015077
EMBL:BT015902 IPI:IPI00545469 RefSeq:NP_176403.1 UniGene:At.49506
ProteinModelPortal:Q6DBE5 PRIDE:Q6DBE5 EnsemblPlants:AT1G62120.1
GeneID:842508 KEGG:ath:AT1G62120 TAIR:At1g62120 InParanoid:Q6DBE5
OMA:MYVRKHD PhylomeDB:Q6DBE5 Genevestigator:Q6DBE5 Uniprot:Q6DBE5
Length = 437
Score = 141 (54.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 66/288 (22%), Positives = 123/288 (42%)
Query: 1 MEISTSQNGN--SVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRA-ADNWAYLKSIGIL 57
M++S GN SV+ L+ GF D I ++ + RL ++ +++ A +L+SIG
Sbjct: 78 MKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGAS 137
Query: 58 ERKLPNVVSKCPKILTLGLNEKLVPMVECLATL--GTKPYEVASAITRFPPILSHSVEEK 115
+L VS PKIL + L + + + K ++ P E K
Sbjct: 138 SSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEADKSSKLEKLCHSLPE--GSKQENK 195
Query: 116 LCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLV 175
+ LL + +GVP++ L +++ + + + K E++ +G + +
Sbjct: 196 IRNLLVL-REMGVPQRLLFSLLISDAGDVCG--KEKFKESLKKAVEIGF--DPTTATFVK 250
Query: 176 KHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRC 235
+ G S D + K +GL D+ + K+P +L + KI + TFL
Sbjct: 251 ALNVLYGLS-DKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLG-L 308
Query: 236 GFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
GF+ + +V +P + S + ++ + +FLV M + VA P
Sbjct: 309 GFSRDEFLMMVKRFPQCIGYSTE-LMKTKTEFLVTEMNWPLKAVASIP 355
>TAIR|locus:2036813 [details] [associations]
symbol:AT1G62010 "AT1G62010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004392 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:BT005017 EMBL:AK117589 IPI:IPI00518008
PIR:T02145 RefSeq:NP_176392.1 UniGene:At.36332
ProteinModelPortal:O80705 SMR:O80705 PaxDb:O80705 PRIDE:O80705
DNASU:842496 EnsemblPlants:AT1G62010.1 GeneID:842496
KEGG:ath:AT1G62010 TAIR:At1g62010 eggNOG:NOG252661
InParanoid:O80705 OMA:WPRSLTH PhylomeDB:O80705 ArrayExpress:O80705
Genevestigator:O80705 Uniprot:O80705
Length = 415
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 68/287 (23%), Positives = 125/287 (43%)
Query: 2 EISTSQNGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAA--DNWAYLKSIGILER 59
+++ N +SV+ L+ GF D I + + R+ ++ D + +L+S G
Sbjct: 63 KLTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVL-IDNDATSLGSKLQFLQSRGASSS 121
Query: 60 KLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEE--KLC 117
+L VVS PKIL + L + + + E A +++ I SHS+ + K+
Sbjct: 122 ELTEVVSTVPKILGKREGKSLSRYYDFIKVI----IE-ADKSSKYEKI-SHSLAQGNKIR 175
Query: 118 PLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKH 177
+L + LGVP+K+L ++LL + + K ++ + +G V H
Sbjct: 176 NILVL-RELGVPQKRL--LLLLISKSQPVCGKEKFDASLKKVVEMGF---DPTTSTFV-H 228
Query: 178 PFIMGYSV-DNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCG 236
M Y + D + +SVG D+ + K+P L K+ + TFL G
Sbjct: 229 ALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLG-LG 287
Query: 237 FADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
F+ + +PP + S + +++ + +FLV+ M + VA P
Sbjct: 288 FSRDVFMMMFKRFPPCIGYSTE-AVKKKTEFLVKEMNWPVKAVASIP 333
>TAIR|locus:2010698 [details] [associations]
symbol:AT1G56380 "AT1G56380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] [GO:0006863
"purine nucleobase transport" evidence=RCA] EMBL:CP002684 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00938838
RefSeq:NP_001154432.1 UniGene:At.52229 ProteinModelPortal:F4I534
EnsemblPlants:AT1G56380.2 GeneID:842091 KEGG:ath:AT1G56380
OMA:ELLMEDA ArrayExpress:F4I534 Uniprot:F4I534
Length = 399
Score = 133 (51.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 65/285 (22%), Positives = 128/285 (44%)
Query: 2 EISTSQ--NGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRA-ADNWAYLKSIGILE 58
E+S+ N NSV+ L+ F D I + L + + + +L+S IL
Sbjct: 50 EVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELLMEDAENSLCPKLKFLESREILS 109
Query: 59 RKLPNVVSKCPKILTLGLNEKLVPMVECLATLG-TKPYEVASAITRFPPILSHSVEEKLC 117
+L ++V++ PKIL + + ++ + + T+ T + P + S+ K+
Sbjct: 110 SRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSRSDFYKVCELYPYIESSIR-KVI 168
Query: 118 PLLAFFQALGVPEKQLGRMILLNPRLISYSIESK-LTETVDFLTSLGL-AREGMIGKVLV 175
+ F P+ + + ++ ++ ++ L E V+ +LG R+ + ++
Sbjct: 169 EM--GFDPFA-PK-------IFDATVVVCTLSNETLEERVNIYKTLGFDVRD--VWEMFK 216
Query: 176 KHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKI-LSPNFTFLKR 234
K P + S + ++ + E LK GL E ++ + K P+ C D +++ ++ NF FLK
Sbjct: 217 KCPTFLNIS-EKKITQSFETLKKCGLVEEEVISMFQKSPQ--CIDFSELDITQNFEFLKG 273
Query: 235 CGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEV 279
CG + ++ ++ YP + S K L FL + G DEV
Sbjct: 274 CGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQ--GFSKDEV 316
Score = 124 (48.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/173 (23%), Positives = 77/173 (44%)
Query: 52 KSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHS 111
K++G R + + KCP L + +K+ E L G EV S + P + S
Sbjct: 202 KTLGFDVRDVWEMFKKCPTFLNIS-EKKITQSFETLKKCGLVEEEVISMFQKSPQCIDFS 260
Query: 112 VEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIG 171
E + F + G+ E+++ M P+ I +S E K+ V+ G +++ ++
Sbjct: 261 -ELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFS-EKKILNAVETFLGQGFSKDEVMM 318
Query: 172 KV----LVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRD 220
V +V P ++ +S++ + P +K++ K L V+ F ++C D
Sbjct: 319 MVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPD 371
>TAIR|locus:1006230704 [details] [associations]
symbol:AT1G62085 "AT1G62085" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC000375
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
IPI:IPI00517604 PIR:D96647 RefSeq:NP_974069.1 UniGene:At.66074
ProteinModelPortal:O04576 PaxDb:O04576 PRIDE:O04576
EnsemblPlants:AT1G62085.1 GeneID:2745844 KEGG:ath:AT1G62085
TAIR:At1g62085 eggNOG:NOG314882 HOGENOM:HOG000113939
InParanoid:O04576 OMA:ENNIRRN PhylomeDB:O04576
ProtClustDB:CLSN2682053 Genevestigator:O04576 Uniprot:O04576
Length = 461
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 144 ISYSIESKLTET-VDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLK 202
+ Y K E V+ SLG + G + + K P + +S +N++ T E LK GL
Sbjct: 253 VVYRFRDKTIEAKVNVCKSLGFS-VGDVWAMFKKCPSFLNFS-ENKIVQTWETLKKCGLL 310
Query: 203 ELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLE 262
E D+ V KFP+ + KI++ TFL GF+ ++A + +P LI S + +++
Sbjct: 311 EDDVLSVLKKFPQCINASEQKIMNSIETFLG-LGFSRDEVAMIAKRFPQCLILSAE-TVK 368
Query: 263 PRIKFLVEVMGRQIDEVADYP 283
+ +FLV+ M + V P
Sbjct: 369 KKTEFLVKKMNWPLKAVVSTP 389
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/160 (25%), Positives = 71/160 (44%)
Query: 17 KDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCPKILTLGL 76
K GF+ + MFK+C +++ W LK G+LE + +V+ K P+ +
Sbjct: 270 KSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINAS- 328
Query: 77 NEKLVPMVECLATLGTKPYEVASAITRFPP--ILSHSVEEKLCPLLAFFQALGVPEKQLG 134
+K++ +E LG EVA RFP ILS +K L + + P K
Sbjct: 329 EQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLV--KKMNWPLKA-- 384
Query: 135 RMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVL 174
++ P ++ YS+E + + + +L +G +G L
Sbjct: 385 --VVSTPAVLGYSLEKRTIPRCNVIKAL--MSKGSLGSEL 420
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 52 KSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHS 111
KS+G + + KCP L N K+V E L G +V S + +FP ++ S
Sbjct: 270 KSLGFSVGDVWAMFKKCPSFLNFSEN-KIVQTWETLKKCGLLEDDVLSVLKKFPQCINAS 328
Query: 112 VEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIG 171
E+K+ + F LG ++ + P+ + S E+ +T +FL +
Sbjct: 329 -EQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKT-EFLVK----KMNWPL 382
Query: 172 KVLVKHPFIMGYSVDNRLRPTSEFLKSV 199
K +V P ++GYS++ R P +K++
Sbjct: 383 KAVVSTPAVLGYSLEKRTIPRCNVIKAL 410
>FB|FBgn0037008 [details] [associations]
symbol:mTerf3 species:7227 "Drosophila melanogaster"
[GO:0006264 "mitochondrial DNA replication" evidence=IMP]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=IMP] [GO:0032543 "mitochondrial translation" evidence=IMP]
GO:GO:0005739 EMBL:AE014296 GO:GO:0032543 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:AY051744 RefSeq:NP_649240.1
UniGene:Dm.7718 SMR:Q9VPD5 IntAct:Q9VPD5 MINT:MINT-743061
STRING:Q9VPD5 EnsemblMetazoa:FBtr0078215 GeneID:40279
KEGG:dme:Dmel_CG5047 UCSC:CG5047-RA CTD:40279 FlyBase:FBgn0037008
InParanoid:Q9VPD5 OrthoDB:EOG4GHX4W GenomeRNAi:40279 NextBio:817950
Uniprot:Q9VPD5
Length = 354
Score = 130 (50.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 41/178 (23%), Positives = 79/178 (44%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L E+ + P + F GV GRM NP L ++ T V++L S +
Sbjct: 116 VLKLDFEKNVKPYITFLVDQGVSPDDFGRMFTKNPLLFKEDLDDLQTR-VNYLKSKRFSD 174
Query: 167 EGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILS 226
E ++L ++P+ + +S R F K L DL+++A + P + ++ +
Sbjct: 175 EAR-QRILTQNPYWLMFSTRRVDRRLGYFQKEFKLSGHDLRLLATREPNAITYNMEHLRK 233
Query: 227 PNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPD 284
FT + GF +++ LV P +L+ + +E R ++ + MG ++ P+
Sbjct: 234 SVFTLKEEMGFNAKELSDLVVRKPRLLMIPPDDLVE-RFSYIHQDMGLPHAQIVQCPE 290
>TAIR|locus:2037338 [details] [associations]
symbol:AT1G74120 "AT1G74120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AC079678 IPI:IPI00521430 PIR:C96769
RefSeq:NP_565080.1 UniGene:At.66135 ProteinModelPortal:Q9C6A1
PRIDE:Q9C6A1 EnsemblPlants:AT1G74120.1 GeneID:843752
KEGG:ath:AT1G74120 TAIR:At1g74120 HOGENOM:HOG000006334
InParanoid:Q9C6A1 OMA:FRAGFEV PhylomeDB:Q9C6A1
ProtClustDB:CLSN2689192 ArrayExpress:Q9C6A1 Genevestigator:Q9C6A1
Uniprot:Q9C6A1
Length = 445
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 49/216 (22%), Positives = 97/216 (44%)
Query: 16 LKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCPKILTLG 75
L+ GF ++ R L + + L S+ I ++ L +++S CP +L
Sbjct: 48 LQRYGFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLRSE 107
Query: 76 LNEKL-VPMVECLATLGTKPYEVASAITRFPPILSHSVE-----EKLCPLLAFFQALGVP 129
K VP+ C G +SAI +L HS +K + ++LG
Sbjct: 108 FLRKWRVPLSNC----GKHGVVSSSAIKS---VLEHSSRIGIGPDKFNECVRVLKSLGFC 160
Query: 130 EKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRL 189
+ + R++ P ++ + E ++ ++FL +G+AR+ I + P ++G + RL
Sbjct: 161 DSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDN-IERFFHVFPEVLGIGTETRL 218
Query: 190 RPT-SEFLKSVGLKELDLQVVAVKFPEVLCRDVNKI 224
+P EF+K +G + D++ + P VL ++ ++
Sbjct: 219 KPLLDEFMK-MGFSKDDVKKEIAREPRVLGLELGEL 253
>UNIPROTKB|G3V130 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
EMBL:CH471060 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AP003465 UniGene:Hs.308613 HGNC:HGNC:24258
ProteinModelPortal:G3V130 SMR:G3V130 Ensembl:ENST00000522822
ArrayExpress:G3V130 Bgee:G3V130 Uniprot:G3V130
Length = 296
Score = 123 (48.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L E+ + +L F + +G+ + QLG + N + S +E+ T V +L S ++
Sbjct: 58 LLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKTR-VAYLHSKNFSK 116
Query: 167 EGMIGKVLVKHPFIMGYSV---DNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNK 223
+ +++ K PF++ +SV DNRL F K + L + + V+ P +L +
Sbjct: 117 AD-VAQMVRKAPFLLNFSVERLDNRL---GFFQKELELSVKKTRDLVVRLPRLLTGSLEP 172
Query: 224 ILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
+ + GF +I ++ P +L + K L F+ VM + +P
Sbjct: 173 VKENMKVYRLELGFKHNEIQHMITRIPKMLTAN-KMKLTETFDFVHNVMSIPHHIIVKFP 231
Query: 284 DFF 286
F
Sbjct: 232 QVF 234
>UNIPROTKB|Q5ZJC8 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9031 "Gallus gallus" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212
EMBL:AJ720506 IPI:IPI00591676 RefSeq:NP_001006348.1
UniGene:Gga.6457 PRIDE:Q5ZJC8 GeneID:420237 KEGG:gga:420237
CTD:51001 eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577
InParanoid:Q5ZJC8 KO:K15032 OrthoDB:EOG4CRM08 NextBio:20823185
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 Uniprot:Q5ZJC8
Length = 405
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 42/182 (23%), Positives = 84/182 (46%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L+ E+ + +L F + +G+ + QLG + NP ++ +E+ L V +L S
Sbjct: 167 LLTLDFEKDITKILLFLKDVGIEDNQLGPFLTKNPYILGEELEA-LETRVAYLKSKKFGN 225
Query: 167 EGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKS-VGLKELDLQVVAVKFPEVLCRDVNKIL 225
I +++ + P+++ +SV+ RL F K+ +GL + + ++FP +L + +
Sbjct: 226 -AEITQMVSRAPYLLLFSVE-RLDNRLGFFKNELGLSVKKTKDLVIRFPRLLTGKLEPV- 282
Query: 226 SPNFTFLK-RCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPD 284
N + GF ++ + P IL S K L +L +MG + + +P
Sbjct: 283 KENLQVCQVEFGFERNEVQQIAFKTPKILTAS-KKRLRQTFDYLHNIMGIPHNMLTRFPQ 341
Query: 285 FF 286
F
Sbjct: 342 VF 343
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00092
Identities = 52/232 (22%), Positives = 98/232 (42%)
Query: 12 VIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCPKI 71
++ FLKD G D + + + G E + AYLKS ++ +VS+ P +
Sbjct: 179 ILLFLKDVGIEDNQLGPFLTKNPYILGEELEALETRVAYLKSKKFGNAEITQMVSRAPYL 238
Query: 72 LTLGLNEKLVPMVECLAT-LGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPE 130
L + E+L + LG + + RFP +L+ +E L G
Sbjct: 239 LLFSV-ERLDNRLGFFKNELGLSVKKTKDLVIRFPRLLTGKLEPVKENLQVCQVEFGFER 297
Query: 131 KQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLR 190
++ ++ P++++ S + +L +T D+L ++ G+ +L + P + + R++
Sbjct: 298 NEVQQIAFKTPKILTAS-KKRLRQTFDYLHNI----MGIPHNMLTRFPQVFNSKL-LRIK 351
Query: 191 PTSEFLKSVGLKELDLQVVA-------VKFP-EVLCRDVNKILSPNFT-FLK 233
FL +G + D + V P EV C ++ K +F FLK
Sbjct: 352 ERHMFLIFLGRAQYDPTKPSYISLDQLVSLPDEVFCTEIAKASMQDFEKFLK 403
>UNIPROTKB|F1P3M7 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
GO:GO:0044212 IPI:IPI00591676 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AADN02024909 PRIDE:F1P3M7 Ensembl:ENSGALT00000025772
Uniprot:F1P3M7
Length = 405
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 42/182 (23%), Positives = 84/182 (46%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L+ E+ + +L F + +G+ + QLG + NP ++ +E+ L V +L S
Sbjct: 167 LLTLDFEKDITKILLFLKDVGIEDNQLGPFLTKNPYILGEDLEA-LETRVAYLKSKKFGN 225
Query: 167 EGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKS-VGLKELDLQVVAVKFPEVLCRDVNKIL 225
I +++ + P+++ +SV+ RL F K+ +GL + + ++FP +L + +
Sbjct: 226 -AEITQMVSRAPYLLLFSVE-RLDNRLGFFKNELGLSVKKTKDLVIRFPRLLTGKLEPV- 282
Query: 226 SPNFTFLK-RCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPD 284
N + GF ++ + P IL S K L +L +MG + + +P
Sbjct: 283 KENLQVCQVEFGFERNEVQQIAFKTPKILTAS-KKRLRQTFDYLHNIMGIPHNMLTRFPQ 341
Query: 285 FF 286
F
Sbjct: 342 VF 343
>TAIR|locus:2142763 [details] [associations]
symbol:AT5G07900 "AT5G07900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016020 "membrane" evidence=IDA] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016020 EMBL:AL133421 EMBL:AB005249
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
eggNOG:NOG320618 HOGENOM:HOG000093133 UniGene:At.32655
UniGene:At.626 EMBL:AF370295 EMBL:AY063042 EMBL:AY086199
IPI:IPI00534486 PIR:T45615 RefSeq:NP_568185.1
ProteinModelPortal:Q9SD94 PaxDb:Q9SD94 PRIDE:Q9SD94 DNASU:830684
EnsemblPlants:AT5G07900.1 GeneID:830684 KEGG:ath:AT5G07900
TAIR:At5g07900 InParanoid:Q9SD94 OMA:HCMMLSE PhylomeDB:Q9SD94
ProtClustDB:CLSN2689534 ArrayExpress:Q9SD94 Genevestigator:Q9SD94
Uniprot:Q9SD94
Length = 405
Score = 123 (48.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 62 PNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLA 121
P+ + + L L E+ ++ L G +++S + + P +L + E L P L+
Sbjct: 83 PDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLS 142
Query: 122 FFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIM 181
FF ++GV + L R + +P +++ S+ ++L + +FL S+ L + I L + ++
Sbjct: 143 FFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSV-LDSDEKIVAALRRTTWVF 201
Query: 182 GYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVL 217
L P ++ G+ E ++++ FPE +
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAV 237
>UNIPROTKB|Q96E29 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AF132946 EMBL:AP003465 EMBL:BC012995 IPI:IPI00101163
IPI:IPI00798150 RefSeq:NP_057026.3 UniGene:Hs.308613 PDB:3M66
PDB:3OPG PDBsum:3M66 PDBsum:3OPG ProteinModelPortal:Q96E29
SMR:Q96E29 STRING:Q96E29 DMDM:74731522 PaxDb:Q96E29 PRIDE:Q96E29
DNASU:51001 Ensembl:ENST00000287025 GeneID:51001 KEGG:hsa:51001
UCSC:uc003yhr.1 GeneCards:GC08M097321 HGNC:HGNC:24258 HPA:HPA002966
neXtProt:NX_Q96E29 PharmGKB:PA142671309 InParanoid:Q96E29
OMA:TRVAYLQ PhylomeDB:Q96E29 EvolutionaryTrace:Q96E29
GenomeRNAi:51001 NextBio:53456 ArrayExpress:Q96E29 Bgee:Q96E29
CleanEx:HS_MTERFD1 Genevestigator:Q96E29 GermOnline:ENSG00000156469
Uniprot:Q96E29
Length = 417
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L E+ + +L F + +G+ + QLG + N + S +E+ T V +L S ++
Sbjct: 179 LLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKTR-VAYLHSKNFSK 237
Query: 167 EGMIGKVLVKHPFIMGYSV---DNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNK 223
+ +++ K PF++ +SV DNRL F K + L + + V+ P +L +
Sbjct: 238 AD-VAQMVRKAPFLLNFSVERLDNRL---GFFQKELELSVKKTRDLVVRLPRLLTGSLEP 293
Query: 224 ILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
+ + GF +I ++ P +L + K L F+ VM + +P
Sbjct: 294 VKENMKVYRLELGFKHNEIQHMITRIPKMLTAN-KMKLTETFDFVHNVMSIPHHIIVKFP 352
Query: 284 DFF 286
F
Sbjct: 353 QVF 355
>TAIR|locus:2018062 [details] [associations]
symbol:AT1G62150 "AT1G62150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
EMBL:CP002684 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:BT005682 EMBL:AK118965 IPI:IPI00535716 RefSeq:NP_176406.1
UniGene:At.10248 ProteinModelPortal:Q8GWB0 PRIDE:Q8GWB0
EnsemblPlants:AT1G62150.1 GeneID:842511 KEGG:ath:AT1G62150
TAIR:At1g62150 InParanoid:Q8GWB0 OMA:YSENRII PhylomeDB:Q8GWB0
ArrayExpress:Q8GWB0 Genevestigator:Q8GWB0 Uniprot:Q8GWB0
Length = 463
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 66/274 (24%), Positives = 115/274 (41%)
Query: 1 MEISTSQNGN--SVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRA-ADNWAYLKSIGIL 57
M++S GN +V+ L+ F D I + L + + + ++S G
Sbjct: 80 MKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTLLVADAENSLGPKLLLMQSRGAS 139
Query: 58 ERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSV----- 112
+L +VSK PKIL + ++ + + + K A ++F L HS+
Sbjct: 140 SSELTEIVSKVPKILGMKGDKSIGRYYDIV-----KEIIEADKSSKFEK-LCHSLPEGSK 193
Query: 113 -EEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAREGMIG 171
E K+ +L + LGVP++ L ++ N + + K E+++ + +G +
Sbjct: 194 QENKIRNVLVL-RDLGVPQRLLFSLLFSNHHVCCG--KEKFEESLNKVVGMGF--DPTTP 248
Query: 172 KVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTF 231
K + + G S D RL K GL D+ + K P L N+I+ F
Sbjct: 249 KFVEALCIVYGLS-DKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQ-TFEA 306
Query: 232 LKRCGFADGQIAALVAAYPPILIKS---IKNSLE 262
LKRCG + ++ ++ P L S I NS+E
Sbjct: 307 LKRCGLCEDEVLSVFKKNPLCLRASEQQILNSME 340
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 46/185 (24%), Positives = 78/185 (42%)
Query: 20 GFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCPKILTLGLNEK 79
GF+ T + C + G+ R +N+ K G+ + + KCP L N +
Sbjct: 242 GFDPTTPKFVEALCI-VYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSEN-R 299
Query: 80 LVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILL 139
++ E L G EV S + P L S E+++ + F LG + M+
Sbjct: 300 IIQTFEALKRCGLCEDEVLSVFKKNPLCLRAS-EQQILNSMETFIGLGFSRDEFVMMVKC 358
Query: 140 NPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSV 199
P+ I YS E +T +F+ + KV+ P ++GYS++ R P +K++
Sbjct: 359 LPQCIGYSAEMVKKKT-EFVVK----KMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKAL 413
Query: 200 GLKEL 204
K L
Sbjct: 414 MSKGL 418
>UNIPROTKB|Q99551 [details] [associations]
symbol:MTERF "Transcription termination factor,
mitochondrial" species:9606 "Homo sapiens" [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0006353
"DNA-dependent transcription, termination" evidence=IDA]
[GO:0006393 "termination of mitochondrial transcription"
evidence=IDA;TAS] [GO:0032392 "DNA geometric change" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=TAS] [GO:0005759
"mitochondrial matrix" evidence=TAS] [GO:0006390 "transcription
from mitochondrial promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 GO:GO:0006355 GO:GO:0042645 EMBL:CH471091
EMBL:CH236949 GO:GO:0003690 Reactome:REACT_1788 GO:GO:0032392
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 KO:K15031 EMBL:Y09615
EMBL:AK222730 EMBL:AC003086 EMBL:BC000965 EMBL:BC108648
EMBL:BC130389 EMBL:BC130391 IPI:IPI00016095 RefSeq:NP_008911.1
UniGene:Hs.532216 PDB:3MVA PDB:3MVB PDB:3N6S PDB:3N7Q PDBsum:3MVA
PDBsum:3MVB PDBsum:3N6S PDBsum:3N7Q ProteinModelPortal:Q99551
SMR:Q99551 IntAct:Q99551 STRING:Q99551 PhosphoSite:Q99551
DMDM:12644536 PaxDb:Q99551 PRIDE:Q99551 DNASU:7978
Ensembl:ENST00000351870 GeneID:7978 KEGG:hsa:7978 UCSC:uc003ulc.1
CTD:7978 GeneCards:GC07M091500 HGNC:HGNC:21463 HPA:HPA044894
MIM:602318 neXtProt:NX_Q99551 PharmGKB:PA142671308 eggNOG:NOG328956
HOGENOM:HOG000252957 HOVERGEN:HBG052524 InParanoid:Q99551
OMA:GLTRKCL PhylomeDB:Q99551 ChiTaRS:MTERF EvolutionaryTrace:Q99551
GenomeRNAi:7978 NextBio:30500 ArrayExpress:Q99551 Bgee:Q99551
CleanEx:HS_MTERF Genevestigator:Q99551 GermOnline:ENSG00000127989
GO:GO:0006393 Uniprot:Q99551
Length = 399
Score = 122 (48.0 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 56/246 (22%), Positives = 109/246 (44%)
Query: 50 YLKSIGILERKLPNVVSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILS 109
+L S G + + +++S+ P+ +T E L + + T E+ + + R P
Sbjct: 110 FLLSKGASKEVIASIISRYPRAITR-TPENLSKRWDLWRKIVTSDLEIVNILERSPESFF 168
Query: 110 HSVEE-KLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR-- 166
S L + F ++G+ K L R++ PR S S++ + V+FL + GL+
Sbjct: 169 RSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLN-KQMVEFLQAAGLSLGH 227
Query: 167 ---EGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSV-GLKELDLQVVAVKFPEVLCRDV- 221
+ K++ K+PFI+ S R++ EFL+S L +L +V + P D+
Sbjct: 228 NDPADFVRKIIFKNPFILIQST-KRVKANIEFLRSTFNLNSEEL-LVLICGPGAEILDLS 285
Query: 222 NKILSPNFTFLKR----CGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQID 277
N ++ +K G + ++ V +YP ++ + K +I L+E I
Sbjct: 286 NDYARRSYANIKEKLFSLGCTEEEVQKFVLSYPDVIFLAEKK-FNDKIDCLMEE-NISIS 343
Query: 278 EVADYP 283
++ + P
Sbjct: 344 QIIENP 349
>RGD|735158 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] RGD:735158
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:BC062080 IPI:IPI00400733 RefSeq:NP_955419.1 UniGene:Rn.103375
STRING:Q6P6Q6 PRIDE:Q6P6Q6 GeneID:299514 KEGG:rno:299514
UCSC:RGD:735158 InParanoid:Q6P6Q6 NextBio:645359
ArrayExpress:Q6P6Q6 Genevestigator:Q6P6Q6
GermOnline:ENSRNOG00000004492 Uniprot:Q6P6Q6
Length = 409
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 78 EKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMI 137
+KLV + L+ + P +VA+ + R + E+ + +L F + LG+ + QLG +
Sbjct: 149 QKLVQLGVDLSKIEKHP-DVANLLLRL------NFEKDIKQILLFLKDLGLEDNQLGPFL 201
Query: 138 LLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKH-PFIMGYSV---DNRLRPTS 193
N + S +E+ T V +L S ++ + +VK+ PF++ +SV DNRL
Sbjct: 202 TKNYAIFSEDLENLKTR-VAYLQSKNFSKTDIA--CMVKNAPFLLSFSVERLDNRL---G 255
Query: 194 EFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPIL 253
F K + L + + V+ P +L + + + GF +I +V P +L
Sbjct: 256 FFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMVTKIPKML 315
Query: 254 IKSIKNSLEPRIKFLVEVMGRQIDEVADYPDFF 286
+ K L ++ VM + +P F
Sbjct: 316 TAN-KRKLTETFDYVHNVMNIPHHIIVKFPQVF 347
>UNIPROTKB|E2RL82 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GO:GO:0044212 CTD:51001 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AAEX03015990 RefSeq:XP_003433727.1 Ensembl:ENSCAFT00000015040
GeneID:100684270 KEGG:cfa:100684270 Uniprot:E2RL82
Length = 417
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 78 EKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMI 137
+KLV + L+ + P E A+ + R E+ + +L F + LG+ + QLG +
Sbjct: 157 QKLVHLGVDLSKIEKHP-EAANLLLRL------DFEKDIKQILMFLKDLGIEDNQLGPYL 209
Query: 138 LLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSV---DNRLRPTSE 194
N + S +E+ T V +L S ++ I +++ PF++ +SV DNRL
Sbjct: 210 TKNYAIFSEDLENLKTR-VAYLQSKNFSK-AQIAQMVRNAPFLLSFSVERLDNRL---GF 264
Query: 195 FLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQIAALVAAYPPILI 254
F K + L + + V+ P +L + + + GF +I ++ P +L
Sbjct: 265 FQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRVPKMLT 324
Query: 255 KSIKNSLEPRIKFLVEVMGRQIDEVADYPDFF 286
+ K L ++ VM + +P F
Sbjct: 325 AN-KRKLTETFDYVHNVMNIPHHLIVRFPQVF 355
>MGI|MGI:1913660 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] MGI:MGI:1913660 GO:GO:0005739 GO:GO:0045892
GO:GO:0006351 GO:GO:0044212 CTD:51001 eggNOG:NOG246142
HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032 OrthoDB:EOG4CRM08
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
EMBL:AK010525 EMBL:AK011934 EMBL:BC025173 EMBL:BC085282
IPI:IPI00109282 RefSeq:NP_079823.2 UniGene:Mm.347939
ProteinModelPortal:Q8R3J4 SMR:Q8R3J4 STRING:Q8R3J4 PRIDE:Q8R3J4
DNASU:66410 Ensembl:ENSMUST00000021991 GeneID:66410 KEGG:mmu:66410
UCSC:uc007qzw.2 GeneTree:ENSGT00390000005801 InParanoid:Q8R3J4
NextBio:321609 Bgee:Q8R3J4 CleanEx:MM_MTERFD1 Genevestigator:Q8R3J4
GermOnline:ENSMUSG00000021519 Uniprot:Q8R3J4
Length = 412
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L E+ + +L F + LG+ + QLG + N + S +E+ T V +L S ++
Sbjct: 174 LLRLDFEKHIKQILLFLKDLGLEDNQLGPFLTKNYAIFSEDLENLKTR-VAYLQSKNFSK 232
Query: 167 EGMIGKVLVKHPFIMGYSV---DNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNK 223
I +++ PF++ +SV DNRL F K + L + + V+ P +L +
Sbjct: 233 TD-IARMVKNAPFLLSFSVERLDNRL---GFFQKELELNVKKTRDLVVRLPRLLTGSLEP 288
Query: 224 ILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
+ + GF +I +V P +L + K L ++ VM + +P
Sbjct: 289 VKENMKVYHLELGFKHNEIQHMVIKIPKMLTAN-KRKLTEIFDYVHNVMNIPHHIIVKFP 347
Query: 284 DFF 286
F
Sbjct: 348 QLF 350
>TAIR|locus:2103291 [details] [associations]
symbol:SHOT1 "AT3G60400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL138646 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
IPI:IPI00545820 PIR:T47851 RefSeq:NP_191599.1 UniGene:At.34455
ProteinModelPortal:Q9M219 SMR:Q9M219 PRIDE:Q9M219
EnsemblPlants:AT3G60400.1 GeneID:825211 KEGG:ath:AT3G60400
TAIR:At3g60400 eggNOG:NOG285291 HOGENOM:HOG000242270
InParanoid:Q9M219 OMA:ESIGIDY PhylomeDB:Q9M219
ProtClustDB:CLSN2685047 Genevestigator:Q9M219 Uniprot:Q9M219
Length = 558
Score = 99 (39.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 90 LGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIE 149
LG + E+ + R + EE L +F GV ++ +IL NP ++++ +E
Sbjct: 241 LGCENEEMWELMCRNKSLFLEYSEEALMNKAGYFCRFGVSKEDAALLILRNPAIMNFDLE 300
Query: 150 SKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEFLKSVGLKE 203
+ L GL R+ + V K+P++ G N+L+ L+++ L E
Sbjct: 301 KPVISVTGMLKHFGL-RQDEVDAVAQKYPYVFGR---NQLKNLPYVLRAIDLHE 350
Score = 63 (27.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 225 LSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYPD 284
L F L G +I L+ + P IL + +S++ +++FL MG +D + +P
Sbjct: 428 LHDRFQILLNSGIIFSKICMLIRSAPKILNQK-PHSIQDKLRFLCGEMGDSLDYLEVFPA 486
Query: 285 F 285
+
Sbjct: 487 Y 487
>TAIR|locus:2036868 [details] [associations]
symbol:AT1G61980 "AT1G61980" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005739 "mitochondrion" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634
GO:GO:0009409 EMBL:AC004392 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.23835 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:BT029746 IPI:IPI00542184 PIR:T02142
RefSeq:NP_176389.1 UniGene:At.36338 ProteinModelPortal:O80703
PaxDb:O80703 PRIDE:O80703 EnsemblPlants:AT1G61980.1 GeneID:842493
KEGG:ath:AT1G61980 TAIR:At1g61980 eggNOG:NOG251984
InParanoid:O80703 OMA:LIGSELP PhylomeDB:O80703
Genevestigator:O80703 Uniprot:O80703
Length = 418
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 65/282 (23%), Positives = 120/282 (42%)
Query: 8 NGNSVIWFLKDRGFNDRTIHDMFKRCKRLQGVEKDRA-ADNWAYLKSIGILERKLPNVVS 66
N +SV+ L+ GF D I + +L + +++ A +L+S G +L +VS
Sbjct: 83 NPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVS 142
Query: 67 KCPKILTLGLNEKLVPMVECLA-TLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQA 125
PKIL ++ + + + TL K + + FP ++E K+ L + +
Sbjct: 143 TVPKILGKRGHKTISVFYDFIKETLLDKSSKSEKSCQPFP---QGNLENKIRNL-SVLRE 198
Query: 126 LGVPEKQLGRMILLNPRLISYSI----ESKLTETVDFLTSLGLAREGMIGKVLVKHPFIM 181
LG+P K LL P LIS + + K E++ + +G + K + +
Sbjct: 199 LGMPHK------LLFPLLISCDVPVFGKEKFEESLKKVVEMGF--DPSTSKFVEALCVVQ 250
Query: 182 GYSVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRCGFADGQ 241
S D + K +G + V ++P L KIL+ TFL GF+ +
Sbjct: 251 RLS-DKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLG-LGFSRDE 308
Query: 242 IAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
+ L+ +P + S + ++ + +FLV+ M + + P
Sbjct: 309 FSVLIKRFPQGIGLSAE-MVKKKTEFLVKKMNWPLKALVSNP 349
>UNIPROTKB|F1RY61 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:CU463146 RefSeq:XP_001929306.1
UniGene:Ssc.10844 Ensembl:ENSSSCT00000006681 GeneID:100152384
KEGG:ssc:100152384 Uniprot:F1RY61
Length = 414
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 42/183 (22%), Positives = 79/183 (43%)
Query: 107 ILSHSVEEKLCPLLAFFQALGVPEKQLGRMILLNPRLISYSIESKLTETVDFLTSLGLAR 166
+L E+ + +L F + LG+ + QLG + N + S +E+ T V +L S ++
Sbjct: 176 LLRLDFEKDIKQILLFLKDLGMEDNQLGTFLTKNYAIFSEDLENLKTR-VAYLQSKNFSK 234
Query: 167 EGMIGKVLVKHPFIMGYSV---DNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNK 223
I +++ PF++ +SV DNRL F K + L + + ++ P +L +
Sbjct: 235 AD-IAQMVRNAPFLLSFSVERLDNRL---GFFQKELELSVKKTRDLIIRLPRLLTGSLEP 290
Query: 224 ILSPNFTFLKRCGFADGQIAALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
+ + GF +I +V P +L + K L ++ VM + +P
Sbjct: 291 VKENMKVYRLELGFKHNEIQHMVTKIPKMLTAN-KRKLTETFDYVHNVMRIPHHVIVRFP 349
Query: 284 DFF 286
F
Sbjct: 350 QVF 352
>UNIPROTKB|E2RMX2 [details] [associations]
symbol:MTERFD3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] GO:GO:0006355 GO:GO:0005759
GO:GO:0006351 GO:GO:0044212 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 CTD:80298 KO:K15031 OMA:QYRIRKL
GeneTree:ENSGT00530000063817 EMBL:AAEX03007373
RefSeq:XP_003431558.1 Ensembl:ENSCAFT00000002828 GeneID:100685274
KEGG:cfa:100685274 Uniprot:E2RMX2
Length = 385
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 64/281 (22%), Positives = 120/281 (42%)
Query: 22 NDRTIHDMFK------RCKRLQG---VEKDRAADNWA-YLKSIGILERKLPNVVSKCPKI 71
N RT+ ++K + +RL+G E + + A L+ +G E + +++ +CP+
Sbjct: 45 NKRTVEKLYKFSVDIRKIRRLKGWVLFEDETYVEEVADVLQQLGADEATVASILERCPEA 104
Query: 72 LTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPL-LAFFQALGVPE 130
+ + E + E+ I +FP +++ L + FFQ LG+
Sbjct: 105 IVCSPTT-VNTQREVWQLVCKNEQELVKLIEQFPESFFTIKDQETQKLNIQFFQELGLKN 163
Query: 131 KQLGRMILLNPRLISYSIESKLTETVDFLT----SLGLAREGM---IGKVLVKHPFIMGY 183
+GR + + IE K + + L +LG + M + K+L ++PFI+
Sbjct: 164 VVIGRFLTTASNIFHNPIE-KNRQMISILQESYLNLGGSEANMKVWLLKLLSQNPFILLN 222
Query: 184 SVDNRLRPTSEFLKSVGLKELDLQVVAVKFPEVLCRDVNKILSPNFTFLKRC-GFADGQI 242
S ++ T EFL+ G ++ + K L + + + +F K D +
Sbjct: 223 S-SAAIKKTLEFLQEQGFTNFEILQLLSKLKGFLFQLCPGNIQNSISFSKNAFKCTDHDL 281
Query: 243 AALVAAYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVADYP 283
LV P IL S+ LE RI+ L++ G I ++ + P
Sbjct: 282 KQLVLKCPAILYYSVP-VLEERIQGLLKE-GISIAQIKETP 320
>TAIR|locus:2136902 [details] [associations]
symbol:AT4G09620 "AT4G09620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] GO:GO:0009507 EMBL:CP002687 InterPro:IPR003690
Pfam:PF02536 IPI:IPI00520647 RefSeq:NP_192700.2 UniGene:At.26367
ProteinModelPortal:F4JK28 SMR:F4JK28 PRIDE:F4JK28
EnsemblPlants:AT4G09620.1 GeneID:826547 KEGG:ath:AT4G09620
OMA:GYNVDCK Uniprot:F4JK28
Length = 212
Score = 109 (43.4 bits), Expect = 0.00065, P = 0.00065
Identities = 26/88 (29%), Positives = 51/88 (57%)
Query: 65 VSKCPKILTLGLNEKLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQ 124
V + PK+ TL N+ ++E L +LG ++ + +FP +L S+EE++ P + +
Sbjct: 117 VKENPKVETL--NQ----ILEFLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILE 170
Query: 125 -ALGVPEKQLGRMILLNPRLISYSIESK 151
G+ KQL ++L NP+++ Y+++ K
Sbjct: 171 NQWGITGKQLRNLLLRNPKVLGYNVDCK 198
>TAIR|locus:2018042 [details] [associations]
symbol:AT1G62110 "AT1G62110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT005380
EMBL:AK117829 IPI:IPI00522637 RefSeq:NP_176402.2 UniGene:At.36313
ProteinModelPortal:Q8GY68 PaxDb:Q8GY68 PRIDE:Q8GY68
EnsemblPlants:AT1G62110.1 GeneID:842507 KEGG:ath:AT1G62110
TAIR:At1g62110 InParanoid:Q8GY68 OMA:QFIRISE PhylomeDB:Q8GY68
Genevestigator:Q8GY68 Uniprot:Q8GY68
Length = 462
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 44/196 (22%), Positives = 86/196 (43%)
Query: 17 KDRGFNDRTIHDMFKRCKRLQGVEKDRAADNWAYLKSIGILERKLPNVVSKCPKILTLGL 76
K GF + MFK+C + + LK G+LE ++ +V+ K P+ + G
Sbjct: 267 KGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVISVLKKYPQCI--GT 324
Query: 77 NE-KLVPMVECLATLGTKPYEVASAITRFPPILSHSVEEKLCPLLAFFQALGVPEKQLGR 135
+E K++ +E LG E + + RFP L S E + + + P K
Sbjct: 325 SEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMNWPLKD--- 381
Query: 136 MILLNPRLISYSIESKLTETVDFLTSLGLAREGMIGKVLVKHPFIMGYSVDNRLRPTSEF 195
++ NP ++ Y++E + + + +L R ++G + P + V +
Sbjct: 382 -VVSNPTVLGYNLEKRTVPRCNVIEALMSKR--LLGDTGSELPPMSSVLVCTDELFLKRY 438
Query: 196 LKSVGLKELDLQVVAV 211
+++ G KEL L+++ +
Sbjct: 439 VRNHGDKELVLELMTI 454
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 329 311 0.00080 116 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 607 (65 KB)
Total size of DFA: 202 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.30u 0.17s 25.47t Elapsed: 00:00:01
Total cpu time: 25.31u 0.17s 25.48t Elapsed: 00:00:01
Start: Sat May 11 07:35:44 2013 End: Sat May 11 07:35:45 2013