Query 020217
Match_columns 329
No_of_seqs 267 out of 1421
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 13:34:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3doc_A Glyceraldehyde 3-phosph 100.0 1.5E-72 5.2E-77 545.0 20.8 209 85-296 1-210 (335)
2 3lvf_P GAPDH 1, glyceraldehyde 100.0 3.4E-72 1.2E-76 542.9 21.5 208 84-296 2-212 (338)
3 4dib_A GAPDH, glyceraldehyde 3 100.0 5.2E-72 1.8E-76 542.7 18.0 208 86-297 4-212 (345)
4 3pym_A GAPDH 3, glyceraldehyde 100.0 2.6E-71 9E-76 535.8 22.5 205 87-297 2-209 (332)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 4.3E-71 1.5E-75 538.6 18.7 211 85-297 1-226 (359)
6 3v1y_O PP38, glyceraldehyde-3- 100.0 1.2E-70 4.1E-75 532.1 20.2 207 86-297 3-213 (337)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 1.2E-69 4E-74 526.7 22.2 205 85-296 6-214 (346)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 8.1E-70 2.8E-74 529.2 16.8 208 84-297 19-232 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 1.3E-66 4.5E-71 503.9 21.6 207 87-296 2-211 (335)
10 2ep7_A GAPDH, glyceraldehyde-3 100.0 2E-66 6.7E-71 503.8 17.5 207 85-296 1-209 (342)
11 2b4r_O Glyceraldehyde-3-phosph 100.0 5.1E-66 1.7E-70 501.4 19.9 206 86-296 11-221 (345)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 1.3E-61 4.6E-66 467.8 19.9 205 87-296 1-206 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 3.3E-61 1.1E-65 472.8 20.6 210 85-296 1-212 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 1.5E-60 5E-65 461.7 20.5 208 87-296 2-210 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 3.9E-60 1.3E-64 458.6 22.4 210 85-296 1-212 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 2E-58 6.7E-63 446.0 19.8 208 87-298 2-210 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 5.8E-58 2E-62 446.1 19.0 209 84-296 15-228 (354)
18 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.3E-57 4.5E-62 439.9 19.4 208 87-298 1-210 (332)
19 1gad_O D-glyceraldehyde-3-phos 100.0 3.6E-57 1.2E-61 436.4 19.9 205 87-297 2-208 (330)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 3E-57 1E-61 438.3 18.6 208 85-297 1-213 (339)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 3.2E-56 1.1E-60 430.6 20.2 207 85-296 2-212 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 9.7E-56 3.3E-60 426.2 20.0 206 85-296 2-210 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 5.1E-43 1.7E-47 339.0 5.3 183 85-295 1-190 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 1.8E-34 6.1E-39 277.3 13.4 179 87-296 1-195 (331)
25 2r00_A Aspartate-semialdehyde 100.0 5.1E-33 1.7E-37 267.4 15.5 182 86-296 3-201 (336)
26 1cf2_P Protein (glyceraldehyde 100.0 5.5E-34 1.9E-38 274.4 3.0 180 87-295 2-186 (337)
27 2hjs_A USG-1 protein homolog; 100.0 7E-33 2.4E-37 266.8 10.7 183 85-296 5-203 (340)
28 2czc_A Glyceraldehyde-3-phosph 100.0 2.8E-32 9.7E-37 261.1 4.9 180 85-295 1-185 (334)
29 1b7g_O Protein (glyceraldehyde 100.0 1.3E-31 4.5E-36 258.2 8.6 175 87-299 2-189 (340)
30 1t4b_A Aspartate-semialdehyde 100.0 1.1E-31 3.6E-36 261.7 1.5 182 87-296 2-230 (367)
31 2ep5_A 350AA long hypothetical 99.9 1.7E-28 5.7E-33 236.8 7.7 186 85-296 3-201 (350)
32 1xyg_A Putative N-acetyl-gamma 99.9 2.4E-28 8.2E-33 237.0 6.4 175 86-295 16-217 (359)
33 1ys4_A Aspartate-semialdehyde 99.9 9.5E-28 3.2E-32 231.4 7.8 187 85-296 7-207 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 99.9 3.2E-27 1.1E-31 227.8 9.6 175 86-294 4-202 (345)
35 3pwk_A Aspartate-semialdehyde 99.9 2.4E-25 8.1E-30 217.5 13.5 160 85-274 1-162 (366)
36 3tz6_A Aspartate-semialdehyde 99.9 5.6E-25 1.9E-29 213.2 14.0 159 87-274 2-163 (344)
37 3pzr_A Aspartate-semialdehyde 99.9 7.6E-26 2.6E-30 221.3 4.5 159 87-274 1-168 (370)
38 3uw3_A Aspartate-semialdehyde 99.9 1.4E-25 4.6E-30 220.0 3.5 160 86-274 4-172 (377)
39 4dpk_A Malonyl-COA/succinyl-CO 99.9 1.1E-24 3.8E-29 211.9 5.4 185 85-296 6-203 (359)
40 4dpl_A Malonyl-COA/succinyl-CO 99.9 1.1E-24 3.8E-29 211.9 4.5 185 85-296 6-203 (359)
41 2nqt_A N-acetyl-gamma-glutamyl 99.9 1.4E-23 4.9E-28 203.6 8.1 183 86-294 9-215 (352)
42 3hsk_A Aspartate-semialdehyde 99.9 3.6E-22 1.2E-26 195.9 8.1 187 85-296 18-224 (381)
43 3dr3_A N-acetyl-gamma-glutamyl 99.8 4.4E-22 1.5E-26 192.4 3.2 175 87-283 5-205 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.7 3.3E-17 1.1E-21 159.3 5.3 161 85-277 12-197 (351)
45 1nvm_B Acetaldehyde dehydrogen 97.8 5.4E-05 1.9E-09 71.9 8.9 151 85-270 3-163 (312)
46 1f06_A MESO-diaminopimelate D- 97.5 0.0001 3.4E-09 69.6 6.1 89 85-209 2-90 (320)
47 3bio_A Oxidoreductase, GFO/IDH 97.2 0.00034 1.2E-08 65.5 5.7 87 86-207 9-95 (304)
48 3ohs_X Trans-1,2-dihydrobenzen 97.1 0.00056 1.9E-08 63.9 5.7 97 85-209 1-98 (334)
49 4hkt_A Inositol 2-dehydrogenas 97.0 0.0011 3.8E-08 61.7 6.6 94 85-209 2-95 (331)
50 3i23_A Oxidoreductase, GFO/IDH 96.9 0.0012 4.2E-08 62.1 6.5 96 85-209 1-97 (349)
51 3euw_A MYO-inositol dehydrogen 96.9 0.002 6.9E-08 60.2 7.8 95 85-209 3-97 (344)
52 3ezy_A Dehydrogenase; structur 96.9 0.00087 3E-08 62.8 5.2 96 85-209 1-96 (344)
53 3mz0_A Inositol 2-dehydrogenas 96.9 0.0015 5.2E-08 61.1 6.7 98 85-209 1-98 (344)
54 3kux_A Putative oxidoreductase 96.7 0.0033 1.1E-07 59.2 7.9 93 85-209 6-99 (352)
55 2ejw_A HDH, homoserine dehydro 96.7 0.004 1.4E-07 59.8 8.2 88 86-208 3-97 (332)
56 3ic5_A Putative saccharopine d 96.7 0.0021 7.3E-08 49.5 5.2 97 85-207 4-100 (118)
57 3ec7_A Putative dehydrogenase; 96.7 0.0026 8.7E-08 60.3 6.7 99 84-209 21-119 (357)
58 3ijp_A DHPR, dihydrodipicolina 96.6 0.00031 1E-08 66.6 0.1 97 85-206 20-117 (288)
59 3gdo_A Uncharacterized oxidore 96.6 0.0031 1.1E-07 59.7 7.0 93 85-209 4-97 (358)
60 3ing_A Homoserine dehydrogenas 96.6 0.0044 1.5E-07 59.3 8.0 37 85-121 3-43 (325)
61 3fhl_A Putative oxidoreductase 96.6 0.0044 1.5E-07 58.6 8.0 93 85-209 4-97 (362)
62 2ho3_A Oxidoreductase, GFO/IDH 96.6 0.0048 1.6E-07 57.2 8.0 94 86-209 1-94 (325)
63 3c1a_A Putative oxidoreductase 96.6 0.003 1E-07 58.4 6.6 93 85-209 9-101 (315)
64 3db2_A Putative NADPH-dependen 96.6 0.0038 1.3E-07 58.7 7.3 94 85-209 4-98 (354)
65 3qy9_A DHPR, dihydrodipicolina 96.6 0.0019 6.6E-08 59.4 5.0 33 86-121 3-35 (243)
66 3cea_A MYO-inositol 2-dehydrog 96.6 0.0025 8.5E-08 59.3 5.8 96 85-209 7-103 (346)
67 3e18_A Oxidoreductase; dehydro 96.6 0.006 2.1E-07 57.8 8.5 93 86-209 5-97 (359)
68 3e9m_A Oxidoreductase, GFO/IDH 96.6 0.0021 7.1E-08 60.1 5.3 95 85-209 4-99 (330)
69 3f4l_A Putative oxidoreductase 96.6 0.0028 9.7E-08 59.4 6.2 96 85-209 1-97 (345)
70 3e82_A Putative oxidoreductase 96.5 0.0042 1.4E-07 59.0 6.8 93 85-209 6-99 (364)
71 1ydw_A AX110P-like protein; st 96.5 0.0034 1.2E-07 59.2 6.0 99 85-209 5-103 (362)
72 3q2i_A Dehydrogenase; rossmann 96.5 0.008 2.7E-07 56.5 8.5 96 85-209 12-107 (354)
73 2dc1_A L-aspartate dehydrogena 96.4 0.0036 1.2E-07 55.8 5.8 136 87-269 1-136 (236)
74 3evn_A Oxidoreductase, GFO/IDH 96.4 0.0041 1.4E-07 57.9 6.3 96 85-209 4-99 (329)
75 1tlt_A Putative oxidoreductase 96.4 0.0055 1.9E-07 56.6 7.0 92 86-209 5-97 (319)
76 1p9l_A Dihydrodipicolinate red 96.4 0.0041 1.4E-07 57.3 6.0 33 87-121 1-34 (245)
77 3rc1_A Sugar 3-ketoreductase; 96.4 0.0046 1.6E-07 58.4 6.4 95 85-209 26-121 (350)
78 4f3y_A DHPR, dihydrodipicolina 96.4 0.0036 1.2E-07 58.5 5.5 96 86-207 7-103 (272)
79 3upl_A Oxidoreductase; rossman 96.4 0.0066 2.3E-07 60.7 7.7 110 85-207 22-137 (446)
80 4had_A Probable oxidoreductase 96.3 0.0042 1.4E-07 58.0 5.8 95 85-209 22-118 (350)
81 3uuw_A Putative oxidoreductase 96.3 0.0077 2.6E-07 55.4 7.4 92 85-209 5-98 (308)
82 1xea_A Oxidoreductase, GFO/IDH 96.3 0.0079 2.7E-07 55.8 7.2 94 85-209 1-95 (323)
83 1j5p_A Aspartate dehydrogenase 96.2 0.0036 1.2E-07 58.3 4.3 78 85-204 11-88 (253)
84 4gqa_A NAD binding oxidoreduct 96.1 0.0035 1.2E-07 60.1 4.3 97 85-209 25-128 (412)
85 3m2t_A Probable dehydrogenase; 96.1 0.0074 2.5E-07 57.2 6.4 95 86-209 5-100 (359)
86 3mtj_A Homoserine dehydrogenas 96.1 0.0072 2.5E-07 60.3 6.5 92 86-208 10-109 (444)
87 2ixa_A Alpha-N-acetylgalactosa 96.1 0.011 3.9E-07 57.6 7.8 102 85-209 19-123 (444)
88 3do5_A HOM, homoserine dehydro 96.1 0.0037 1.3E-07 59.8 4.2 36 86-121 2-43 (327)
89 3moi_A Probable dehydrogenase; 96.1 0.0052 1.8E-07 58.8 5.1 94 85-209 1-96 (387)
90 3c8m_A Homoserine dehydrogenas 96.0 0.011 3.9E-07 56.2 7.2 36 86-121 6-46 (331)
91 1h6d_A Precursor form of gluco 96.0 0.012 4.1E-07 57.5 7.4 100 85-209 82-182 (433)
92 4fb5_A Probable oxidoreductase 95.9 0.016 5.4E-07 54.0 7.2 98 85-209 24-126 (393)
93 4ew6_A D-galactose-1-dehydroge 95.8 0.0097 3.3E-07 55.9 5.6 87 86-209 25-113 (330)
94 1dih_A Dihydrodipicolinate red 95.8 0.017 5.7E-07 53.7 7.0 100 86-210 5-105 (273)
95 4h3v_A Oxidoreductase domain p 95.7 0.0075 2.6E-07 56.1 4.4 97 85-209 5-107 (390)
96 1zh8_A Oxidoreductase; TM0312, 95.7 0.011 3.9E-07 55.4 5.5 96 85-209 17-114 (340)
97 2dt5_A AT-rich DNA-binding pro 95.6 0.018 6.3E-07 51.8 6.3 95 86-210 80-174 (211)
98 1lc0_A Biliverdin reductase A; 95.5 0.02 6.8E-07 52.9 6.2 91 85-209 6-97 (294)
99 2glx_A 1,5-anhydro-D-fructose 95.4 0.029 1E-06 51.7 7.0 93 87-209 1-94 (332)
100 3ip3_A Oxidoreductase, putativ 94.6 0.0094 3.2E-07 55.7 1.4 96 85-209 1-99 (337)
101 3keo_A Redox-sensing transcrip 94.6 0.029 1E-06 50.9 4.4 98 86-210 84-182 (212)
102 3o9z_A Lipopolysaccaride biosy 94.5 0.17 5.8E-06 47.1 9.6 94 86-209 3-104 (312)
103 2p2s_A Putative oxidoreductase 94.4 0.076 2.6E-06 49.3 6.9 93 86-209 4-98 (336)
104 2vt3_A REX, redox-sensing tran 94.3 0.063 2.1E-06 48.5 6.1 94 87-210 86-179 (215)
105 3u3x_A Oxidoreductase; structu 94.1 0.055 1.9E-06 51.3 5.5 93 86-209 26-120 (361)
106 3oa2_A WBPB; oxidoreductase, s 94.1 0.12 4E-06 48.3 7.6 94 86-209 3-105 (318)
107 1r0k_A 1-deoxy-D-xylulose 5-ph 94.0 0.049 1.7E-06 53.6 5.1 40 87-128 5-46 (388)
108 3v5n_A Oxidoreductase; structu 93.7 0.081 2.8E-06 51.2 5.9 97 85-209 36-142 (417)
109 2g1u_A Hypothetical protein TM 93.4 0.39 1.3E-05 39.5 8.8 32 86-120 19-50 (155)
110 2nvw_A Galactose/lactose metab 93.0 0.066 2.3E-06 53.2 4.1 100 85-209 38-146 (479)
111 3ius_A Uncharacterized conserv 93.0 0.17 5.9E-06 44.8 6.4 33 85-120 4-36 (286)
112 3oqb_A Oxidoreductase; structu 92.9 0.077 2.6E-06 50.2 4.2 33 176-209 83-115 (383)
113 3btv_A Galactose/lactose metab 92.8 0.044 1.5E-06 53.5 2.4 99 86-209 20-127 (438)
114 3dty_A Oxidoreductase, GFO/IDH 92.7 0.08 2.7E-06 50.6 4.1 102 85-209 11-117 (398)
115 1ebf_A Homoserine dehydrogenas 92.6 0.12 4E-06 49.9 5.2 37 85-121 3-40 (358)
116 3dqp_A Oxidoreductase YLBE; al 92.0 0.27 9.3E-06 42.0 6.3 31 87-120 1-32 (219)
117 1y81_A Conserved hypothetical 92.0 0.73 2.5E-05 38.2 8.7 85 85-208 13-101 (138)
118 3fwz_A Inner membrane protein 91.9 0.19 6.7E-06 40.8 5.0 39 84-127 5-43 (140)
119 3ff4_A Uncharacterized protein 91.7 0.66 2.2E-05 38.2 8.0 83 86-208 4-90 (122)
120 3abi_A Putative uncharacterize 91.5 0.035 1.2E-06 52.7 0.0 93 85-208 15-107 (365)
121 2duw_A Putative COA-binding pr 90.6 1.3 4.3E-05 36.9 8.8 86 86-208 13-102 (145)
122 3e48_A Putative nucleoside-dip 90.6 0.15 5.2E-06 45.3 3.3 32 87-120 1-33 (289)
123 2nu8_A Succinyl-COA ligase [AD 90.6 0.7 2.4E-05 42.9 7.9 88 85-206 6-94 (288)
124 3kb6_A D-lactate dehydrogenase 90.2 0.36 1.2E-05 46.0 5.7 30 87-119 142-171 (334)
125 4g2n_A D-isomer specific 2-hyd 90.2 0.26 9E-06 47.3 4.8 31 87-120 174-204 (345)
126 3c1o_A Eugenol synthase; pheny 90.1 0.36 1.2E-05 43.5 5.4 32 85-119 3-35 (321)
127 2bma_A Glutamate dehydrogenase 90.0 1.5 5E-05 44.3 10.2 141 86-252 252-403 (470)
128 1qyd_A Pinoresinol-lariciresin 90.0 0.36 1.2E-05 43.2 5.2 31 87-120 5-36 (313)
129 2pi1_A D-lactate dehydrogenase 89.9 0.28 9.6E-06 46.7 4.7 32 86-120 141-172 (334)
130 4gmf_A Yersiniabactin biosynth 89.9 0.99 3.4E-05 43.5 8.6 93 85-209 6-102 (372)
131 3m2p_A UDP-N-acetylglucosamine 89.9 0.83 2.8E-05 41.0 7.6 33 85-120 1-34 (311)
132 3evt_A Phosphoglycerate dehydr 89.9 0.3 1E-05 46.5 4.8 33 86-121 137-169 (324)
133 1iuk_A Hypothetical protein TT 89.7 1.3 4.5E-05 36.7 8.1 87 86-209 13-103 (140)
134 3pp8_A Glyoxylate/hydroxypyruv 89.5 0.3 1E-05 46.3 4.5 32 86-120 139-170 (315)
135 3hg7_A D-isomer specific 2-hyd 89.4 0.33 1.1E-05 46.3 4.7 32 86-120 140-171 (324)
136 2yq5_A D-isomer specific 2-hyd 89.3 0.33 1.1E-05 46.6 4.7 32 86-120 148-179 (343)
137 1xdw_A NAD+-dependent (R)-2-hy 89.2 0.34 1.2E-05 45.9 4.7 32 86-120 146-177 (331)
138 1qp8_A Formate dehydrogenase; 89.1 0.35 1.2E-05 45.4 4.6 32 86-120 124-155 (303)
139 2r6j_A Eugenol synthase 1; phe 89.1 0.43 1.5E-05 43.1 5.1 32 85-119 10-42 (318)
140 1dxy_A D-2-hydroxyisocaproate 89.0 0.36 1.2E-05 45.8 4.7 32 86-120 145-176 (333)
141 2d59_A Hypothetical protein PH 89.0 1.8 6.1E-05 35.9 8.5 83 86-207 22-108 (144)
142 3gg9_A D-3-phosphoglycerate de 88.9 0.37 1.3E-05 46.4 4.7 32 86-120 160-191 (352)
143 2g76_A 3-PGDH, D-3-phosphoglyc 88.7 0.4 1.4E-05 45.7 4.8 31 87-120 166-196 (335)
144 1gtm_A Glutamate dehydrogenase 88.6 0.43 1.5E-05 47.1 5.1 32 87-121 213-245 (419)
145 3jtm_A Formate dehydrogenase, 88.5 0.36 1.2E-05 46.4 4.4 31 87-120 165-195 (351)
146 3llv_A Exopolyphosphatase-rela 88.4 0.51 1.7E-05 37.8 4.6 31 87-120 7-37 (141)
147 1lss_A TRK system potassium up 88.4 0.61 2.1E-05 36.5 5.0 31 87-120 5-35 (140)
148 4hy3_A Phosphoglycerate oxidor 88.3 0.38 1.3E-05 46.7 4.4 32 86-120 176-207 (365)
149 1gdh_A D-glycerate dehydrogena 88.2 0.45 1.5E-05 44.8 4.8 32 86-120 146-177 (320)
150 4e5n_A Thermostable phosphite 88.2 0.34 1.1E-05 46.1 3.9 32 86-120 145-176 (330)
151 1mx3_A CTBP1, C-terminal bindi 88.2 0.45 1.5E-05 45.6 4.8 32 86-120 168-199 (347)
152 3aog_A Glutamate dehydrogenase 88.0 1.2 4E-05 44.6 7.8 33 86-121 235-267 (440)
153 2cuk_A Glycerate dehydrogenase 87.9 0.49 1.7E-05 44.5 4.7 32 86-120 144-175 (311)
154 1wwk_A Phosphoglycerate dehydr 87.8 0.49 1.7E-05 44.3 4.7 32 86-120 142-173 (307)
155 3gvx_A Glycerate dehydrogenase 87.8 0.39 1.3E-05 45.0 4.0 31 87-120 123-153 (290)
156 4dgs_A Dehydrogenase; structur 87.8 0.49 1.7E-05 45.4 4.8 31 87-120 172-202 (340)
157 3oet_A Erythronate-4-phosphate 87.6 0.49 1.7E-05 46.3 4.7 30 87-119 120-149 (381)
158 1qyc_A Phenylcoumaran benzylic 87.5 0.56 1.9E-05 41.8 4.7 30 87-119 5-35 (308)
159 1j4a_A D-LDH, D-lactate dehydr 87.5 0.51 1.7E-05 44.7 4.7 33 86-121 146-178 (333)
160 1sc6_A PGDH, D-3-phosphoglycer 87.4 0.51 1.8E-05 46.2 4.7 31 87-120 146-176 (404)
161 2ekl_A D-3-phosphoglycerate de 87.1 0.57 2E-05 44.0 4.7 32 86-120 142-173 (313)
162 2o4c_A Erythronate-4-phosphate 87.1 0.55 1.9E-05 45.8 4.7 31 86-119 116-146 (380)
163 2w2k_A D-mandelate dehydrogena 86.8 0.61 2.1E-05 44.4 4.8 31 87-120 164-195 (348)
164 1id1_A Putative potassium chan 86.6 0.79 2.7E-05 37.4 4.8 31 87-120 4-34 (153)
165 2gas_A Isoflavone reductase; N 86.5 0.59 2E-05 41.6 4.3 30 87-119 3-33 (307)
166 3i6i_A Putative leucoanthocyan 86.3 0.64 2.2E-05 42.6 4.5 31 87-120 11-42 (346)
167 3a06_A 1-deoxy-D-xylulose 5-ph 86.1 0.85 2.9E-05 44.8 5.5 107 87-206 4-114 (376)
168 3e8x_A Putative NAD-dependent 85.9 6.4 0.00022 33.7 10.5 32 86-120 21-53 (236)
169 3ba1_A HPPR, hydroxyphenylpyru 85.8 0.65 2.2E-05 44.2 4.4 30 87-119 165-194 (333)
170 2nac_A NAD-dependent formate d 85.7 0.63 2.2E-05 45.5 4.4 31 87-120 192-222 (393)
171 3l4b_C TRKA K+ channel protien 85.6 0.65 2.2E-05 40.2 4.0 31 87-120 1-31 (218)
172 2gcg_A Glyoxylate reductase/hy 85.3 0.7 2.4E-05 43.5 4.3 32 86-120 155-186 (330)
173 2d0i_A Dehydrogenase; structur 85.2 0.72 2.5E-05 43.6 4.4 31 87-120 147-177 (333)
174 2dbq_A Glyoxylate reductase; D 85.1 0.82 2.8E-05 43.1 4.7 32 86-120 150-181 (334)
175 2j6i_A Formate dehydrogenase; 85.1 0.68 2.3E-05 44.5 4.2 31 87-120 165-196 (364)
176 3k5p_A D-3-phosphoglycerate de 84.7 0.84 2.9E-05 45.1 4.7 30 87-119 157-186 (416)
177 3d4o_A Dipicolinate synthase s 84.6 0.96 3.3E-05 41.5 4.8 31 87-120 156-186 (293)
178 4ina_A Saccharopine dehydrogen 84.0 0.68 2.3E-05 44.8 3.7 97 87-203 2-103 (405)
179 3c85_A Putative glutathione-re 83.9 0.86 2.9E-05 38.1 3.9 32 86-120 39-71 (183)
180 4huj_A Uncharacterized protein 83.9 1 3.6E-05 39.3 4.6 33 86-121 23-55 (220)
181 2rir_A Dipicolinate synthase, 83.7 1.1 3.7E-05 41.2 4.8 32 86-120 157-188 (300)
182 1vpd_A Tartronate semialdehyde 83.6 1 3.5E-05 40.5 4.5 32 85-119 4-35 (299)
183 1oi7_A Succinyl-COA synthetase 83.2 2.3 7.9E-05 39.5 6.8 87 85-206 6-94 (288)
184 2tmg_A Protein (glutamate dehy 83.0 1.6 5.6E-05 43.1 6.0 33 86-121 209-242 (415)
185 4g65_A TRK system potassium up 82.8 0.68 2.3E-05 45.8 3.2 95 86-207 235-332 (461)
186 3l9w_A Glutathione-regulated p 82.6 1 3.5E-05 44.0 4.3 37 87-128 5-41 (413)
187 3gt0_A Pyrroline-5-carboxylate 82.6 1.2 4.1E-05 39.4 4.5 24 85-108 1-24 (247)
188 1v9l_A Glutamate dehydrogenase 82.5 1.8 6.3E-05 42.9 6.1 32 87-121 211-242 (421)
189 3r3j_A Glutamate dehydrogenase 82.4 4.3 0.00015 40.8 8.8 141 86-252 239-390 (456)
190 2yfq_A Padgh, NAD-GDH, NAD-spe 82.3 2.5 8.6E-05 41.8 7.0 34 86-122 212-245 (421)
191 2vns_A Metalloreductase steap3 81.7 1.4 4.8E-05 38.4 4.5 32 85-119 27-58 (215)
192 2hmt_A YUAA protein; RCK, KTN, 81.5 1.4 4.7E-05 34.4 4.0 31 87-120 7-37 (144)
193 4ezb_A Uncharacterized conserv 81.5 1.5 5.1E-05 40.8 4.8 34 84-119 22-55 (317)
194 2ew2_A 2-dehydropantoate 2-red 81.3 1.6 5.4E-05 39.0 4.8 33 85-120 2-34 (316)
195 3qvo_A NMRA family protein; st 81.2 0.73 2.5E-05 40.0 2.5 33 85-119 22-55 (236)
196 2ahr_A Putative pyrroline carb 81.0 1.5 5.1E-05 38.8 4.5 22 87-108 4-25 (259)
197 3ggo_A Prephenate dehydrogenas 80.9 1.6 5.5E-05 40.7 4.9 34 85-119 32-65 (314)
198 1yb4_A Tartronic semialdehyde 80.9 1.1 3.8E-05 40.1 3.6 30 87-119 4-33 (295)
199 3g0o_A 3-hydroxyisobutyrate de 80.8 1.6 5.6E-05 39.8 4.8 32 85-119 6-37 (303)
200 3two_A Mannitol dehydrogenase; 80.8 2.1 7.3E-05 39.6 5.6 130 87-254 178-308 (348)
201 3c24_A Putative oxidoreductase 80.8 1.7 6E-05 39.1 4.9 32 85-119 10-42 (286)
202 3mw9_A GDH 1, glutamate dehydr 80.5 8.5 0.00029 39.1 10.2 34 85-121 243-276 (501)
203 1ygy_A PGDH, D-3-phosphoglycer 80.4 1.5 5.2E-05 44.0 4.8 32 86-120 142-173 (529)
204 4g65_A TRK system potassium up 79.7 1.4 4.9E-05 43.4 4.3 40 86-130 3-42 (461)
205 2x0j_A Malate dehydrogenase; o 79.6 1.1 3.7E-05 42.2 3.2 22 87-108 1-22 (294)
206 1vm6_A DHPR, dihydrodipicolina 79.5 3.1 0.00011 38.2 6.1 32 86-120 12-44 (228)
207 3cky_A 2-hydroxymethyl glutara 79.4 1.8 6.2E-05 38.9 4.6 31 86-119 4-34 (301)
208 1bgv_A Glutamate dehydrogenase 79.2 3.3 0.00011 41.4 6.7 139 87-252 231-382 (449)
209 3d64_A Adenosylhomocysteinase; 79.1 1.8 6E-05 43.8 4.8 31 86-119 277-307 (494)
210 3doj_A AT3G25530, dehydrogenas 78.9 2.1 7.3E-05 39.3 4.9 32 86-120 21-52 (310)
211 3pef_A 6-phosphogluconate dehy 78.8 2.1 7.2E-05 38.6 4.8 30 87-119 2-31 (287)
212 4id9_A Short-chain dehydrogena 78.6 3.4 0.00012 37.4 6.1 32 85-119 18-50 (347)
213 4dll_A 2-hydroxy-3-oxopropiona 78.5 2 7E-05 39.7 4.7 32 85-119 30-61 (320)
214 3hwr_A 2-dehydropantoate 2-red 78.3 2.2 7.5E-05 39.5 4.8 31 85-118 18-48 (318)
215 3n58_A Adenosylhomocysteinase; 78.3 1.9 6.7E-05 43.3 4.7 30 87-119 248-277 (464)
216 3dtt_A NADP oxidoreductase; st 78.2 2.4 8.1E-05 37.7 4.9 33 85-120 18-50 (245)
217 2yv1_A Succinyl-COA ligase [AD 78.2 5 0.00017 37.3 7.3 87 85-206 12-100 (294)
218 2h78_A Hibadh, 3-hydroxyisobut 78.2 2 7E-05 38.8 4.5 30 87-119 4-33 (302)
219 3k92_A NAD-GDH, NAD-specific g 78.1 2.7 9.3E-05 41.8 5.7 34 85-121 220-253 (424)
220 3qha_A Putative oxidoreductase 78.0 1.6 5.6E-05 39.8 3.8 31 86-119 15-45 (296)
221 1yqd_A Sinapyl alcohol dehydro 77.9 2 7E-05 40.3 4.6 31 87-120 189-219 (366)
222 3d1l_A Putative NADP oxidoredu 77.6 2.2 7.4E-05 37.8 4.4 32 87-121 11-42 (266)
223 2f1k_A Prephenate dehydrogenas 77.6 2.4 8.2E-05 37.7 4.7 30 87-119 1-30 (279)
224 2axq_A Saccharopine dehydrogen 77.5 1.8 6.1E-05 43.0 4.2 33 86-120 23-55 (467)
225 3l6d_A Putative oxidoreductase 77.3 2.1 7.2E-05 39.3 4.4 32 85-119 8-39 (306)
226 1ur5_A Malate dehydrogenase; o 77.1 1.3 4.3E-05 41.3 2.9 34 85-121 1-34 (309)
227 1xgk_A Nitrogen metabolite rep 77.1 4.3 0.00015 37.8 6.5 31 86-119 5-36 (352)
228 2g5c_A Prephenate dehydrogenas 77.0 2.6 8.8E-05 37.7 4.8 32 87-119 2-33 (281)
229 3h9u_A Adenosylhomocysteinase; 77.0 2.3 7.7E-05 42.5 4.7 30 87-119 212-241 (436)
230 3aoe_E Glutamate dehydrogenase 76.8 2.1 7.3E-05 42.4 4.5 32 87-121 219-250 (419)
231 1v8b_A Adenosylhomocysteinase; 76.7 1.8 6.1E-05 43.6 4.0 32 86-120 257-288 (479)
232 2raf_A Putative dinucleotide-b 76.4 2.8 9.6E-05 36.4 4.7 31 85-118 18-48 (209)
233 3b1f_A Putative prephenate deh 76.0 2.5 8.7E-05 37.9 4.5 33 86-119 6-38 (290)
234 3eag_A UDP-N-acetylmuramate:L- 75.8 14 0.00047 34.2 9.6 86 86-201 4-91 (326)
235 4gbj_A 6-phosphogluconate dehy 75.7 2.3 7.9E-05 39.3 4.2 33 85-120 4-36 (297)
236 4fcc_A Glutamate dehydrogenase 75.3 3 0.0001 41.8 5.1 100 86-203 235-345 (450)
237 4e21_A 6-phosphogluconate dehy 75.1 2.8 9.7E-05 40.0 4.8 32 86-120 22-53 (358)
238 2uyy_A N-PAC protein; long-cha 75.1 3.1 0.0001 37.9 4.8 31 86-119 30-60 (316)
239 2gf2_A Hibadh, 3-hydroxyisobut 74.9 2.5 8.6E-05 37.9 4.1 30 87-119 1-30 (296)
240 1z82_A Glycerol-3-phosphate de 74.8 3.1 0.00011 38.4 4.8 35 83-120 11-45 (335)
241 3kkj_A Amine oxidase, flavin-c 74.7 3.3 0.00011 33.3 4.4 33 85-120 1-33 (336)
242 1c1d_A L-phenylalanine dehydro 74.5 3 0.0001 40.3 4.8 31 87-121 176-206 (355)
243 1jay_A Coenzyme F420H2:NADP+ o 74.3 3.6 0.00012 34.9 4.8 31 87-120 1-32 (212)
244 3dfz_A SIRC, precorrin-2 dehyd 74.1 7.3 0.00025 35.1 7.0 31 87-120 32-62 (223)
245 3goh_A Alcohol dehydrogenase, 73.9 2.6 9E-05 38.3 4.0 30 87-119 144-173 (315)
246 1i36_A Conserved hypothetical 73.9 3 0.0001 36.8 4.3 29 87-118 1-29 (264)
247 2cvz_A Dehydrogenase, 3-hydrox 73.7 2.7 9.3E-05 37.3 4.0 29 87-119 2-30 (289)
248 3h2s_A Putative NADH-flavin re 73.5 3.9 0.00013 34.4 4.7 31 87-120 1-32 (224)
249 3ew7_A LMO0794 protein; Q8Y8U8 73.4 3.9 0.00013 34.1 4.7 31 87-120 1-32 (221)
250 3gvp_A Adenosylhomocysteinase 72.7 3.4 0.00011 41.3 4.7 30 87-119 221-250 (435)
251 1yqg_A Pyrroline-5-carboxylate 72.2 3.3 0.00011 36.4 4.1 31 87-119 1-31 (263)
252 2yv2_A Succinyl-COA synthetase 71.8 11 0.00039 34.9 8.0 87 85-206 12-101 (297)
253 1ks9_A KPA reductase;, 2-dehyd 71.8 4.2 0.00015 35.8 4.8 31 87-120 1-31 (291)
254 3ktd_A Prephenate dehydrogenas 71.7 3.6 0.00012 39.2 4.6 31 86-119 8-38 (341)
255 1bg6_A N-(1-D-carboxylethyl)-L 71.6 4.1 0.00014 37.3 4.8 31 86-119 4-34 (359)
256 3nkl_A UDP-D-quinovosamine 4-d 71.3 5.6 0.00019 31.6 5.0 34 86-121 4-37 (141)
257 3dfu_A Uncharacterized protein 71.2 1.7 5.7E-05 39.7 2.0 32 86-120 6-37 (232)
258 2pv7_A T-protein [includes: ch 71.2 3.9 0.00013 37.4 4.5 32 85-119 20-52 (298)
259 3pdu_A 3-hydroxyisobutyrate de 71.1 2.8 9.5E-05 37.8 3.5 30 87-119 2-31 (287)
260 3oj0_A Glutr, glutamyl-tRNA re 70.5 2.1 7.3E-05 34.5 2.3 29 87-118 22-50 (144)
261 3nep_X Malate dehydrogenase; h 70.4 8 0.00027 36.4 6.6 22 87-108 1-22 (314)
262 1np3_A Ketol-acid reductoisome 70.3 4 0.00014 38.3 4.5 31 87-120 17-47 (338)
263 3tri_A Pyrroline-5-carboxylate 70.2 4.1 0.00014 37.1 4.4 34 86-119 3-36 (280)
264 3gg2_A Sugar dehydrogenase, UD 69.9 4.3 0.00015 39.9 4.8 32 85-119 1-32 (450)
265 3qsg_A NAD-binding phosphogluc 69.6 3.7 0.00013 37.9 4.0 31 86-119 24-55 (312)
266 4b4o_A Epimerase family protei 68.5 5.4 0.00018 35.4 4.7 30 87-119 1-31 (298)
267 1hdo_A Biliverdin IX beta redu 68.0 6.6 0.00022 32.2 4.9 31 87-120 4-35 (206)
268 2qyt_A 2-dehydropantoate 2-red 68.0 3.6 0.00012 37.0 3.5 37 84-120 6-45 (317)
269 2rcy_A Pyrroline carboxylate r 67.6 3.3 0.00011 36.4 3.1 22 87-108 5-26 (262)
270 2yjz_A Metalloreductase steap4 70.7 1.1 3.8E-05 39.1 0.0 24 85-108 18-41 (201)
271 1t2d_A LDH-P, L-lactate dehydr 67.3 2.3 7.8E-05 40.0 2.1 32 87-121 5-36 (322)
272 1uuf_A YAHK, zinc-type alcohol 67.2 3.9 0.00013 38.5 3.7 30 87-119 196-225 (369)
273 2i76_A Hypothetical protein; N 67.1 1.8 6.1E-05 39.1 1.3 22 86-107 2-23 (276)
274 3dhn_A NAD-dependent epimerase 66.8 5.4 0.00019 33.7 4.2 31 87-120 5-36 (227)
275 2izz_A Pyrroline-5-carboxylate 66.4 4.7 0.00016 37.2 4.1 35 86-120 22-57 (322)
276 3i83_A 2-dehydropantoate 2-red 66.3 6.3 0.00021 36.2 4.8 33 85-120 1-33 (320)
277 1leh_A Leucine dehydrogenase; 66.2 5.9 0.0002 38.2 4.8 34 87-125 174-207 (364)
278 3phh_A Shikimate dehydrogenase 66.1 35 0.0012 31.4 9.9 32 87-121 119-150 (269)
279 1evy_A Glycerol-3-phosphate de 66.1 5.1 0.00017 37.3 4.2 33 85-120 13-46 (366)
280 3gpi_A NAD-dependent epimerase 65.2 6.5 0.00022 34.6 4.6 31 87-120 4-34 (286)
281 4e12_A Diketoreductase; oxidor 64.8 7.3 0.00025 35.2 4.9 30 87-119 5-34 (283)
282 2cf5_A Atccad5, CAD, cinnamyl 64.5 3.4 0.00012 38.5 2.7 31 87-120 182-212 (357)
283 2aef_A Calcium-gated potassium 64.1 3.9 0.00013 35.5 2.9 30 86-119 9-38 (234)
284 4ej6_A Putative zinc-binding d 63.9 7 0.00024 36.7 4.8 29 87-118 184-213 (370)
285 3ldh_A Lactate dehydrogenase; 63.8 12 0.0004 35.8 6.3 143 86-260 21-183 (330)
286 3ego_A Probable 2-dehydropanto 63.7 7.2 0.00025 35.8 4.7 32 85-120 1-32 (307)
287 3hyw_A Sulfide-quinone reducta 63.7 14 0.00049 35.0 7.0 36 85-121 1-36 (430)
288 1txg_A Glycerol-3-phosphate de 63.5 6.1 0.00021 35.8 4.2 31 87-120 1-31 (335)
289 1pgj_A 6PGDH, 6-PGDH, 6-phosph 63.4 6.1 0.00021 39.1 4.4 31 87-120 2-32 (478)
290 4gwg_A 6-phosphogluconate dehy 63.3 6.2 0.00021 39.5 4.5 32 86-120 4-35 (484)
291 3sc6_A DTDP-4-dehydrorhamnose 63.3 4.9 0.00017 35.2 3.4 32 85-119 4-36 (287)
292 2vhw_A Alanine dehydrogenase; 63.1 7.8 0.00027 36.9 5.0 32 86-120 168-199 (377)
293 2p4q_A 6-phosphogluconate dehy 62.3 6.6 0.00022 39.2 4.5 34 84-120 8-41 (497)
294 3ip1_A Alcohol dehydrogenase, 62.3 17 0.00057 34.4 7.1 30 87-119 215-245 (404)
295 3jv7_A ADH-A; dehydrogenase, n 62.2 6 0.00021 36.4 3.9 130 87-254 173-310 (345)
296 2pgd_A 6-phosphogluconate dehy 62.2 6.6 0.00022 38.7 4.4 31 87-120 3-33 (482)
297 3p7m_A Malate dehydrogenase; p 62.0 7.4 0.00025 36.6 4.6 31 86-118 5-35 (321)
298 3vps_A TUNA, NAD-dependent epi 61.7 8.3 0.00029 34.0 4.6 33 85-120 6-39 (321)
299 3ce6_A Adenosylhomocysteinase; 61.7 7.4 0.00025 39.2 4.7 30 87-119 275-304 (494)
300 3hn2_A 2-dehydropantoate 2-red 61.5 6.8 0.00023 35.8 4.1 33 85-120 1-33 (312)
301 1f0y_A HCDH, L-3-hydroxyacyl-C 61.2 9.7 0.00033 34.5 5.1 30 87-119 16-45 (302)
302 2iz1_A 6-phosphogluconate dehy 61.0 6.8 0.00023 38.5 4.3 31 87-120 6-36 (474)
303 2d5c_A AROE, shikimate 5-dehyd 61.0 7.9 0.00027 34.5 4.4 30 88-120 118-147 (263)
304 4hv4_A UDP-N-acetylmuramate--L 60.7 26 0.00088 34.5 8.4 83 87-201 23-106 (494)
305 4a9w_A Monooxygenase; baeyer-v 60.6 17 0.00059 32.1 6.5 32 86-120 3-34 (357)
306 2zyd_A 6-phosphogluconate dehy 60.2 7.5 0.00026 38.5 4.4 32 86-120 15-46 (480)
307 2ydy_A Methionine adenosyltran 60.0 9.8 0.00033 33.8 4.8 31 86-119 2-33 (315)
308 3r6d_A NAD-dependent epimerase 59.7 11 0.00037 31.9 4.8 33 85-120 4-38 (221)
309 1gpj_A Glutamyl-tRNA reductase 59.5 7.3 0.00025 37.5 4.1 31 87-120 168-199 (404)
310 1piw_A Hypothetical zinc-type 59.3 6.5 0.00022 36.6 3.6 30 87-119 181-210 (360)
311 1x13_A NAD(P) transhydrogenase 59.1 9.6 0.00033 36.8 4.9 31 86-119 172-202 (401)
312 3p2y_A Alanine dehydrogenase/p 58.7 7.9 0.00027 37.8 4.2 32 85-119 183-214 (381)
313 3obb_A Probable 3-hydroxyisobu 58.3 9.6 0.00033 35.3 4.5 31 87-120 4-34 (300)
314 3uog_A Alcohol dehydrogenase; 58.2 15 0.00053 34.1 6.0 30 87-119 191-220 (363)
315 2cul_A Glucose-inhibited divis 57.9 36 0.0012 29.2 8.0 32 86-120 3-34 (232)
316 1mv8_A GMD, GDP-mannose 6-dehy 57.9 9.2 0.00031 37.0 4.5 30 87-119 1-30 (436)
317 3g17_A Similar to 2-dehydropan 57.5 6.2 0.00021 35.8 3.1 24 85-108 1-24 (294)
318 1lld_A L-lactate dehydrogenase 57.5 11 0.00038 34.2 4.8 31 85-118 6-38 (319)
319 2q3e_A UDP-glucose 6-dehydroge 57.4 8 0.00027 37.9 4.0 32 87-119 6-37 (467)
320 1xa0_A Putative NADPH dependen 57.3 17 0.00059 33.0 6.0 30 88-120 152-182 (328)
321 3q2o_A Phosphoribosylaminoimid 57.2 11 0.00037 35.4 4.8 31 87-120 15-45 (389)
322 3c7a_A Octopine dehydrogenase; 57.1 9.6 0.00033 36.0 4.4 32 86-119 2-33 (404)
323 3gvi_A Malate dehydrogenase; N 57.0 9.7 0.00033 36.0 4.4 30 86-118 7-37 (324)
324 2a35_A Hypothetical protein PA 56.8 8.3 0.00028 32.0 3.5 33 85-118 4-37 (215)
325 2d8a_A PH0655, probable L-thre 56.6 5.8 0.0002 36.6 2.7 30 87-119 169-199 (348)
326 1l7d_A Nicotinamide nucleotide 56.4 12 0.0004 35.7 4.9 32 85-119 171-202 (384)
327 3ruf_A WBGU; rossmann fold, UD 56.4 12 0.00043 33.6 4.9 32 86-120 25-57 (351)
328 1pl8_A Human sorbitol dehydrog 56.2 16 0.00056 33.7 5.8 30 87-119 173-203 (356)
329 2x4g_A Nucleoside-diphosphate- 56.1 13 0.00044 33.2 4.9 31 87-120 14-45 (342)
330 2ph5_A Homospermidine synthase 55.9 5.7 0.0002 40.1 2.7 96 86-208 13-113 (480)
331 1ek6_A UDP-galactose 4-epimera 55.9 12 0.00041 33.6 4.7 32 85-119 1-33 (348)
332 1e6u_A GDP-fucose synthetase; 54.9 14 0.00047 32.8 4.9 30 87-119 4-34 (321)
333 3m6i_A L-arabinitol 4-dehydrog 54.9 14 0.00049 34.1 5.1 30 87-119 181-211 (363)
334 3fpc_A NADP-dependent alcohol 54.8 8.3 0.00028 35.6 3.5 30 87-119 168-198 (352)
335 2eez_A Alanine dehydrogenase; 54.5 13 0.00046 35.0 5.0 31 86-119 166-196 (369)
336 3slg_A PBGP3 protein; structur 54.5 11 0.00038 34.4 4.2 33 86-120 24-57 (372)
337 2dq4_A L-threonine 3-dehydroge 54.4 10 0.00035 34.9 4.0 30 87-119 166-196 (343)
338 4aj2_A L-lactate dehydrogenase 54.3 20 0.00067 34.0 6.1 24 85-108 18-41 (331)
339 3uko_A Alcohol dehydrogenase c 54.3 11 0.00036 35.3 4.2 30 87-119 195-225 (378)
340 4egb_A DTDP-glucose 4,6-dehydr 54.1 12 0.0004 33.8 4.3 34 86-120 24-58 (346)
341 4dio_A NAD(P) transhydrogenase 54.0 13 0.00044 36.6 4.9 31 85-118 189-219 (405)
342 1xq6_A Unknown protein; struct 54.0 17 0.00058 30.6 5.1 34 86-120 4-38 (253)
343 4gx0_A TRKA domain protein; me 53.8 12 0.0004 37.1 4.6 31 87-120 349-379 (565)
344 1e3j_A NADP(H)-dependent ketos 53.7 30 0.001 31.8 7.1 30 87-119 170-199 (352)
345 1vj0_A Alcohol dehydrogenase, 53.6 9.4 0.00032 35.8 3.7 31 87-119 197-227 (380)
346 4gx0_A TRKA domain protein; me 53.2 18 0.00063 35.7 5.9 34 84-120 125-158 (565)
347 3ghy_A Ketopantoate reductase 53.0 13 0.00046 34.2 4.6 30 87-119 4-33 (335)
348 3st7_A Capsular polysaccharide 52.9 13 0.00043 34.2 4.4 43 87-131 1-44 (369)
349 1zej_A HBD-9, 3-hydroxyacyl-CO 52.8 14 0.00048 34.4 4.7 75 86-189 12-86 (293)
350 4dvj_A Putative zinc-dependent 52.6 11 0.00037 35.3 4.0 92 86-201 172-264 (363)
351 1vl0_A DTDP-4-dehydrorhamnose 52.5 16 0.00056 31.9 4.9 32 85-119 11-43 (292)
352 2hk9_A Shikimate dehydrogenase 52.1 12 0.0004 33.8 4.0 31 87-120 130-160 (275)
353 2csu_A 457AA long hypothetical 51.7 45 0.0015 32.7 8.4 83 86-206 8-94 (457)
354 1pjq_A CYSG, siroheme synthase 51.4 35 0.0012 33.3 7.6 31 87-120 13-43 (457)
355 2o3j_A UDP-glucose 6-dehydroge 51.2 12 0.00041 36.9 4.2 34 85-119 8-41 (481)
356 3zwc_A Peroxisomal bifunctiona 51.2 24 0.0008 37.3 6.6 149 85-257 315-486 (742)
357 2jhf_A Alcohol dehydrogenase E 51.1 22 0.00075 33.0 5.8 30 87-119 193-223 (374)
358 1e3i_A Alcohol dehydrogenase, 50.8 15 0.00051 34.2 4.5 30 87-119 197-227 (376)
359 1yj8_A Glycerol-3-phosphate de 50.4 9.9 0.00034 35.6 3.3 24 85-108 20-43 (375)
360 2vn8_A Reticulon-4-interacting 50.0 13 0.00045 34.7 4.0 30 87-119 185-215 (375)
361 2yy7_A L-threonine dehydrogena 50.0 10 0.00036 33.3 3.2 33 86-119 2-35 (312)
362 1p0f_A NADP-dependent alcohol 50.0 16 0.00054 34.0 4.6 30 87-119 193-223 (373)
363 2dpo_A L-gulonate 3-dehydrogen 49.3 16 0.00056 34.1 4.6 39 86-129 6-44 (319)
364 2z2v_A Hypothetical protein PH 49.1 15 0.00053 34.9 4.4 91 86-207 16-106 (365)
365 3h5n_A MCCB protein; ubiquitin 49.1 7.2 0.00025 37.1 2.1 23 86-108 118-140 (353)
366 3s2e_A Zinc-containing alcohol 49.1 8.4 0.00029 35.3 2.5 133 87-254 168-303 (340)
367 2y0c_A BCEC, UDP-glucose dehyd 49.1 17 0.00059 35.9 4.9 32 85-119 7-38 (478)
368 3ko8_A NAD-dependent epimerase 48.9 19 0.00065 31.7 4.7 31 87-120 1-32 (312)
369 1q0q_A 1-deoxy-D-xylulose 5-ph 48.7 20 0.0007 35.4 5.3 45 86-131 9-54 (406)
370 2y1e_A 1-deoxy-D-xylulose 5-ph 48.7 21 0.00071 35.3 5.3 44 87-131 22-67 (398)
371 4b8w_A GDP-L-fucose synthase; 48.5 15 0.0005 32.0 3.9 24 85-108 5-29 (319)
372 1t2a_A GDP-mannose 4,6 dehydra 48.4 19 0.00064 32.9 4.8 33 85-120 23-56 (375)
373 2fp4_A Succinyl-COA ligase [GD 47.8 32 0.0011 32.0 6.3 88 87-209 14-104 (305)
374 1zcj_A Peroxisomal bifunctiona 47.8 37 0.0013 33.2 7.1 31 86-119 37-67 (463)
375 2c20_A UDP-glucose 4-epimerase 47.7 20 0.00068 31.9 4.7 31 87-120 2-33 (330)
376 2b69_A UDP-glucuronate decarbo 47.3 20 0.00069 32.2 4.8 32 86-120 27-59 (343)
377 4hb9_A Similarities with proba 47.1 20 0.00068 32.5 4.7 30 87-119 2-31 (412)
378 1orr_A CDP-tyvelose-2-epimeras 47.0 21 0.00071 31.8 4.7 30 87-119 2-32 (347)
379 1x0v_A GPD-C, GPDH-C, glycerol 46.9 13 0.00045 34.1 3.5 23 86-108 8-30 (354)
380 3orq_A N5-carboxyaminoimidazol 46.9 20 0.00069 33.7 4.8 32 86-120 12-43 (377)
381 3qwb_A Probable quinone oxidor 46.8 16 0.00053 33.4 3.9 31 87-120 150-181 (334)
382 1dlj_A UDP-glucose dehydrogena 46.8 17 0.00057 34.9 4.3 29 87-119 1-29 (402)
383 3krt_A Crotonyl COA reductase; 46.7 18 0.00061 34.9 4.5 39 87-130 230-269 (456)
384 2wm3_A NMRA-like family domain 46.3 18 0.00061 31.9 4.1 32 87-120 6-38 (299)
385 1f8f_A Benzyl alcohol dehydrog 46.2 19 0.00063 33.5 4.4 30 87-119 192-222 (371)
386 1rpn_A GDP-mannose 4,6-dehydra 46.1 22 0.00075 31.7 4.7 33 85-120 13-46 (335)
387 3lk7_A UDP-N-acetylmuramoylala 46.1 52 0.0018 31.8 7.7 85 87-202 10-98 (451)
388 1cdo_A Alcohol dehydrogenase; 46.0 22 0.00074 33.1 4.8 30 87-119 194-224 (374)
389 1sb8_A WBPP; epimerase, 4-epim 45.6 23 0.0008 32.0 4.9 31 87-120 28-59 (352)
390 4a2c_A Galactitol-1-phosphate 45.4 19 0.00064 32.8 4.2 22 87-108 162-183 (346)
391 2rh8_A Anthocyanidin reductase 45.3 23 0.00079 31.6 4.8 31 85-118 8-39 (338)
392 2bll_A Protein YFBG; decarboxy 45.1 24 0.00081 31.4 4.8 32 87-120 1-33 (345)
393 1n7h_A GDP-D-mannose-4,6-dehyd 45.1 23 0.00077 32.5 4.8 33 85-120 27-60 (381)
394 2fzw_A Alcohol dehydrogenase c 45.1 20 0.00068 33.3 4.4 30 87-119 192-222 (373)
395 2b5w_A Glucose dehydrogenase; 45.0 23 0.00079 32.7 4.9 31 87-120 174-207 (357)
396 4h7p_A Malate dehydrogenase; s 44.8 47 0.0016 31.7 7.1 23 85-107 23-46 (345)
397 2c5a_A GDP-mannose-3', 5'-epim 44.8 24 0.00081 32.6 4.9 33 85-120 28-61 (379)
398 3oh8_A Nucleoside-diphosphate 44.2 23 0.00078 34.7 4.9 32 86-120 147-179 (516)
399 2q1w_A Putative nucleotide sug 43.8 25 0.00084 31.7 4.8 31 87-120 22-53 (333)
400 3mwd_B ATP-citrate synthase; A 43.8 53 0.0018 31.3 7.2 35 85-121 9-46 (334)
401 3ay3_A NAD-dependent epimerase 43.6 11 0.00036 32.9 2.2 31 86-119 2-33 (267)
402 3pid_A UDP-glucose 6-dehydroge 43.5 23 0.00078 35.0 4.8 37 86-128 36-72 (432)
403 1hyh_A L-hicdh, L-2-hydroxyiso 43.1 20 0.00068 32.8 4.1 31 87-118 2-32 (309)
404 1smk_A Malate dehydrogenase, g 43.1 21 0.00071 33.3 4.2 33 85-118 7-40 (326)
405 3k96_A Glycerol-3-phosphate de 43.0 24 0.00081 33.5 4.7 30 86-118 29-58 (356)
406 3d7l_A LIN1944 protein; APC893 42.8 27 0.00092 28.8 4.5 29 87-119 4-33 (202)
407 2i99_A MU-crystallin homolog; 42.7 17 0.00057 33.6 3.5 23 86-108 135-157 (312)
408 3gqv_A Enoyl reductase; medium 42.4 29 0.00099 32.4 5.1 30 87-119 166-196 (371)
409 2d4a_B Malate dehydrogenase; a 41.8 20 0.00068 33.3 3.9 21 88-108 1-21 (308)
410 3tqh_A Quinone oxidoreductase; 41.6 22 0.00074 32.3 4.0 30 87-119 154-184 (321)
411 2p5y_A UDP-glucose 4-epimerase 41.5 29 0.00098 30.7 4.8 30 87-119 1-31 (311)
412 4a0s_A Octenoyl-COA reductase/ 41.4 27 0.00091 33.4 4.8 39 87-130 222-261 (447)
413 7mdh_A Protein (malate dehydro 41.3 34 0.0012 33.2 5.6 24 85-108 31-55 (375)
414 2wtb_A MFP2, fatty acid multif 41.2 51 0.0017 34.4 7.2 56 60-119 287-342 (725)
415 1yvv_A Amine oxidase, flavin-c 41.1 26 0.00089 31.0 4.4 32 86-120 2-33 (336)
416 2ewd_A Lactate dehydrogenase,; 40.8 24 0.00081 32.5 4.2 23 86-108 4-26 (317)
417 1i24_A Sulfolipid biosynthesis 40.8 28 0.00097 31.8 4.7 32 85-119 10-42 (404)
418 1h2b_A Alcohol dehydrogenase; 40.7 38 0.0013 31.3 5.6 31 87-119 188-218 (359)
419 1r6d_A TDP-glucose-4,6-dehydra 40.4 34 0.0012 30.5 5.1 34 87-120 1-38 (337)
420 1lnq_A MTHK channels, potassiu 40.2 16 0.00056 33.5 3.0 35 87-127 116-150 (336)
421 3nx4_A Putative oxidoreductase 40.0 69 0.0024 28.7 7.2 30 88-120 149-179 (324)
422 3ond_A Adenosylhomocysteinase; 39.9 27 0.00093 35.2 4.7 31 87-121 266-296 (488)
423 3enk_A UDP-glucose 4-epimerase 39.9 32 0.0011 30.6 4.9 31 86-119 5-36 (341)
424 1n2s_A DTDP-4-, DTDP-glucose o 39.4 24 0.00081 30.9 3.8 29 87-119 1-30 (299)
425 2pk3_A GDP-6-deoxy-D-LYXO-4-he 39.3 33 0.0011 30.3 4.7 32 86-120 12-44 (321)
426 1a5z_A L-lactate dehydrogenase 38.9 25 0.00085 32.5 4.0 29 87-118 1-31 (319)
427 1y8q_B Anthracycline-, ubiquit 38.7 17 0.00058 37.9 3.1 109 87-202 18-135 (640)
428 1y7t_A Malate dehydrogenase; N 38.6 28 0.00097 31.9 4.4 24 85-108 3-27 (327)
429 1y1p_A ARII, aldehyde reductas 38.5 34 0.0012 30.3 4.7 31 87-120 12-43 (342)
430 2q1s_A Putative nucleotide sug 38.3 32 0.0011 31.6 4.7 32 87-120 33-65 (377)
431 1omo_A Alanine dehydrogenase; 38.3 35 0.0012 31.7 5.0 39 86-127 125-163 (322)
432 3k6j_A Protein F01G10.3, confi 38.3 36 0.0012 33.8 5.3 31 86-119 54-84 (460)
433 1rkx_A CDP-glucose-4,6-dehydra 38.2 34 0.0011 30.9 4.7 31 87-120 10-41 (357)
434 1udb_A Epimerase, UDP-galactos 37.9 35 0.0012 30.4 4.7 30 87-119 1-31 (338)
435 1kew_A RMLB;, DTDP-D-glucose 4 37.6 28 0.00097 31.3 4.1 32 87-120 1-33 (361)
436 2pzm_A Putative nucleotide sug 37.5 33 0.0011 30.8 4.5 32 86-120 20-52 (330)
437 3fr7_A Putative ketol-acid red 37.3 26 0.0009 35.8 4.1 34 87-120 55-91 (525)
438 3jyn_A Quinone oxidoreductase; 37.3 17 0.00059 33.1 2.6 30 87-119 142-172 (325)
439 2x6t_A ADP-L-glycero-D-manno-h 37.0 34 0.0012 30.9 4.6 32 87-120 47-79 (357)
440 1eq2_A ADP-L-glycero-D-mannohe 36.7 35 0.0012 29.7 4.5 31 88-120 1-32 (310)
441 2z1m_A GDP-D-mannose dehydrata 36.4 38 0.0013 30.0 4.7 31 87-120 4-35 (345)
442 3iup_A Putative NADPH:quinone 36.3 42 0.0014 31.4 5.2 39 87-130 172-212 (379)
443 2hun_A 336AA long hypothetical 36.2 33 0.0011 30.5 4.3 33 87-120 4-37 (336)
444 3au8_A 1-deoxy-D-xylulose 5-ph 36.2 33 0.0011 34.7 4.6 45 86-130 77-124 (488)
445 2eih_A Alcohol dehydrogenase; 36.0 47 0.0016 30.3 5.4 30 87-119 168-198 (343)
446 3g79_A NDP-N-acetyl-D-galactos 36.0 34 0.0012 34.1 4.7 32 86-119 18-50 (478)
447 3ehe_A UDP-glucose 4-epimerase 35.7 30 0.001 30.6 3.9 30 87-120 2-32 (313)
448 3sxp_A ADP-L-glycero-D-mannohe 35.6 38 0.0013 30.7 4.7 32 86-120 10-44 (362)
449 3ihm_A Styrene monooxygenase A 35.3 32 0.0011 32.6 4.3 34 84-120 20-53 (430)
450 1pjc_A Protein (L-alanine dehy 35.3 39 0.0013 31.7 4.8 32 86-120 167-198 (361)
451 2bka_A CC3, TAT-interacting pr 35.1 35 0.0012 28.8 4.1 32 87-119 19-51 (242)
452 3fbs_A Oxidoreductase; structu 35.0 48 0.0016 28.4 5.0 33 85-120 1-33 (297)
453 1db3_A GDP-mannose 4,6-dehydra 34.9 41 0.0014 30.3 4.8 30 87-119 2-32 (372)
454 2dkn_A 3-alpha-hydroxysteroid 34.6 45 0.0015 28.1 4.7 29 88-119 3-32 (255)
455 2egg_A AROE, shikimate 5-dehyd 34.4 42 0.0014 30.8 4.8 31 87-120 142-173 (297)
456 1oc2_A DTDP-glucose 4,6-dehydr 34.0 34 0.0012 30.6 4.0 33 87-120 5-38 (348)
457 3itj_A Thioredoxin reductase 1 33.8 41 0.0014 29.5 4.5 34 84-120 20-53 (338)
458 2v6b_A L-LDH, L-lactate dehydr 33.7 43 0.0015 30.7 4.7 22 87-108 1-22 (304)
459 1tt7_A YHFP; alcohol dehydroge 33.4 41 0.0014 30.4 4.5 30 88-120 153-183 (330)
460 1ryi_A Glycine oxidase; flavop 33.3 53 0.0018 29.6 5.3 34 84-120 15-48 (382)
461 2gv8_A Monooxygenase; FMO, FAD 33.2 1.3E+02 0.0046 28.2 8.3 73 88-185 214-289 (447)
462 1y6j_A L-lactate dehydrogenase 33.2 41 0.0014 31.2 4.6 23 86-108 7-29 (318)
463 2gf3_A MSOX, monomeric sarcosi 33.0 51 0.0017 29.8 5.1 33 85-120 2-34 (389)
464 2p4h_X Vestitone reductase; NA 33.0 47 0.0016 29.2 4.8 29 87-118 2-31 (322)
465 1gy8_A UDP-galactose 4-epimera 32.9 46 0.0016 30.4 4.8 31 87-120 3-35 (397)
466 3ado_A Lambda-crystallin; L-gu 32.5 42 0.0014 31.7 4.5 31 87-121 7-37 (319)
467 2xve_A Flavin-containing monoo 32.3 1.4E+02 0.0047 28.7 8.2 75 88-185 199-273 (464)
468 1kjq_A GART 2, phosphoribosylg 32.3 53 0.0018 30.2 5.2 33 85-120 10-42 (391)
469 2jl1_A Triphenylmethane reduct 32.0 26 0.0009 30.4 2.8 32 88-120 2-34 (287)
470 3mog_A Probable 3-hydroxybutyr 32.0 39 0.0013 33.5 4.4 30 87-119 6-35 (483)
471 4a7p_A UDP-glucose dehydrogena 31.8 47 0.0016 32.6 4.9 33 85-120 7-39 (446)
472 4ea9_A Perosamine N-acetyltran 31.8 55 0.0019 28.0 4.8 31 87-120 13-43 (220)
473 2v6g_A Progesterone 5-beta-red 31.8 32 0.0011 30.9 3.4 34 87-120 2-38 (364)
474 3pqe_A L-LDH, L-lactate dehydr 31.7 42 0.0014 31.6 4.4 23 86-108 5-27 (326)
475 2zcu_A Uncharacterized oxidore 31.5 35 0.0012 29.5 3.5 32 88-120 1-33 (286)
476 2uzz_A N-methyl-L-tryptophan o 31.4 43 0.0015 30.1 4.3 32 86-120 2-33 (372)
477 1ff9_A Saccharopine reductase; 31.1 47 0.0016 32.4 4.7 31 87-120 4-34 (450)
478 2r85_A PURP protein PF1517; AT 30.9 48 0.0016 29.6 4.4 32 85-120 1-32 (334)
479 2ggs_A 273AA long hypothetical 30.3 43 0.0015 28.6 3.9 29 87-119 1-30 (273)
480 2dwc_A PH0318, 433AA long hypo 30.2 59 0.002 30.7 5.1 33 85-120 18-50 (433)
481 3rp8_A Flavoprotein monooxygen 30.2 53 0.0018 30.3 4.7 33 85-120 22-54 (407)
482 2f00_A UDP-N-acetylmuramate--L 30.0 1.7E+02 0.0059 28.4 8.6 31 87-121 20-51 (491)
483 1uay_A Type II 3-hydroxyacyl-C 30.0 47 0.0016 27.9 4.1 30 87-119 3-33 (242)
484 3gms_A Putative NADPH:quinone 29.5 67 0.0023 29.3 5.3 31 87-120 146-177 (340)
485 1guz_A Malate dehydrogenase; o 29.5 61 0.0021 29.7 5.0 31 87-118 1-31 (310)
486 2hjr_A Malate dehydrogenase; m 29.5 37 0.0012 31.7 3.5 34 85-121 13-46 (328)
487 1jw9_B Molybdopterin biosynthe 29.4 34 0.0012 30.5 3.2 22 87-108 32-53 (249)
488 3k5i_A Phosphoribosyl-aminoimi 29.3 46 0.0016 31.5 4.3 31 86-119 24-54 (403)
489 1b8p_A Protein (malate dehydro 29.2 51 0.0018 30.5 4.5 24 85-108 4-28 (329)
490 3hhp_A Malate dehydrogenase; M 28.9 34 0.0012 32.0 3.2 22 87-108 1-23 (312)
491 2jv8_A Uncharacterized protein 28.5 38 0.0013 25.1 2.7 30 142-173 11-40 (73)
492 2c29_D Dihydroflavonol 4-reduc 28.5 48 0.0016 29.6 4.0 29 87-118 6-35 (337)
493 2q7v_A Thioredoxin reductase; 28.4 1.5E+02 0.005 26.1 7.2 83 88-185 154-246 (325)
494 1c0p_A D-amino acid oxidase; a 28.1 72 0.0025 28.8 5.2 32 86-120 6-37 (363)
495 2hrz_A AGR_C_4963P, nucleoside 27.4 48 0.0016 29.6 3.8 23 86-108 14-37 (342)
496 4e4t_A Phosphoribosylaminoimid 27.3 61 0.0021 31.1 4.7 30 87-119 36-65 (419)
497 2yut_A Putative short-chain ox 27.3 49 0.0017 27.1 3.6 27 88-119 2-29 (207)
498 3d0o_A L-LDH 1, L-lactate dehy 27.1 41 0.0014 31.2 3.3 24 85-108 5-28 (317)
499 1ldn_A L-lactate dehydrogenase 27.1 41 0.0014 31.1 3.4 24 85-108 5-28 (316)
500 3u62_A Shikimate dehydrogenase 26.9 60 0.0021 29.2 4.4 30 88-120 110-140 (253)
No 1
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.5e-72 Score=544.97 Aligned_cols=209 Identities=44% Similarity=0.726 Sum_probs=200.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||||||||||+++|+++++..+++++|+|||+.|+++++|||||||+||+|+++|++ ++++|.|||++|+|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEV-AGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEE-CSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEE-ecCEEEECCEEEEEEee
Confidence 56899999999999999999998743479999999999999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhh
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~ 244 (329)
++|+++||+++|+||||||||.|+++++++.|+++||||||||+|+++ ++||||||||++.|+++ ++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADG-ADLTVVYGVNNDKLTKD-HLVISNASCTTNC 157 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTT-CSEECCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEecccCHHHhCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999986 68999999999999886 8999999999999
Q ss_pred hhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 245 LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
|+|++|+|||+|||++++||||||||++|+++| +++||||+|++++||||.+
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~kd~r~~r~aa~NiIP~~ 210 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTS 210 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTSSCEEEE
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCccccccccccCcceEecCC
Confidence 999999999999999999999999999999999 8899999999999999985
No 2
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=3.4e-72 Score=542.88 Aligned_cols=208 Identities=44% Similarity=0.692 Sum_probs=199.9
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.|++||||||||||||+++|+++++ +++++|+|||..|+++++|||||||+||+|+++|++ ++++|.|||++|+|++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~ 78 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEV--EGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV-VDGGFRVNGKEVKSFS 78 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHC--CCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEE-cCCEEEECCEEEEEEE
Confidence 3778999999999999999999986 479999999999999999999999999999999998 4789999999999999
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhh
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
+++|+++||+++|+||||||||.|+++++++.|+++||||||||+|+++ |+||||||||++.|+++ ++||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~-~~IISNasCTTn 156 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTN 156 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCEECCTTTTGGGCCSC-CSEEECCCHHHH
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEeccCCHHHcCcc-CCeEecCchhhh
Confidence 9999999999999999999999999999999999999999999999975 78999999999999876 899999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCc--chhhhhccccccCCCc
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQ--GLEESESCSVEHCPNE 296 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~--d~~r~r~a~~~i~p~~ 296 (329)
||+|++|+|||+|||++++||||||||++|+++| +++ ||||+|++++||||..
T Consensus 157 ~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~ 212 (338)
T 3lvf_P 157 SLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNS 212 (338)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEE
T ss_pred hhHHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCC
Confidence 9999999999999999999999999999999999 776 9999999999999986
No 3
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=5.2e-72 Score=542.68 Aligned_cols=208 Identities=46% Similarity=0.736 Sum_probs=187.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
++||||||||||||+++|+++++ +++++|+|||+.|+++++|||||||+||+|+++|++ ++++|.|||++|+|++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~--~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKE--SAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEA-FEDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTC--SSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhC--CCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEeecC
Confidence 57999999999999999999986 479999999999999999999999999999999998 578999999999999999
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhh
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~L 245 (329)
+|+++||+++|+||||||||.|+++++++.|+++||||||||+|+++ |+||||||||++.|++..++||||||||||||
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~L 159 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKN-EDVTIVVGVNEDQLDITKHTVISNASCTTNCL 159 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHcCcccCeEEECCchhhhhh
Confidence 99999999999999999999999999999999999999999999975 78999999999999872289999999999999
Q ss_pred hhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCch
Q 020217 246 APFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNEH 297 (329)
Q Consensus 246 aPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~~ 297 (329)
+|++|+|||+|||++++||||||||++|+++| +++||||+|++++||||...
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~t 212 (345)
T 4dib_A 160 APVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTT 212 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECC-------------CCTTSCTTTCCEEECC
T ss_pred HHHHHHHHHhcCeEEEEEEeeeeccCCceeccccccccccchhhhhceecCCC
Confidence 99999999999999999999999999999999 88999999999999999863
No 4
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=2.6e-71 Score=535.76 Aligned_cols=205 Identities=45% Similarity=0.706 Sum_probs=196.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~-~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
+||||||||||||+++|+++++ +++++|+|||+ .|+++++|||||||+||+|+++|++ ++++|.|||++|+|++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSR--PNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-DDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHS--TTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEEeec
Confidence 6999999999999999999987 46999999998 8999999999999999999999998 588999999999999999
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhh
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~L 245 (329)
+|+++||+++|+||||||||.|+++++++.|+++||||||||+|++ |+||||||||++.|+++ ++||||||||||||
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn~L 155 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS--TAPMFVMGVNEEKYTSD-LKIVSNASCTTNCL 155 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC--CCCeEeeccchhhcCcc-ccEEecCcchhhhh
Confidence 9999999999999999999999999999999999999999999986 57999999999999886 89999999999999
Q ss_pred hhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-C-CcchhhhhccccccCCCch
Q 020217 246 APFVKVMDEELGIVKGAMTTTHSYTGDQALGC-F-TQGLEESESCSVEHCPNEH 297 (329)
Q Consensus 246 aPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~-~~d~~r~r~a~~~i~p~~~ 297 (329)
+|++|+|||+|||++++||||||||++|+++| + ++||||+|++++||||...
T Consensus 156 ap~lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~t 209 (332)
T 3pym_A 156 APLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSST 209 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEEC
T ss_pred HHHHHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCC
Confidence 99999999999999999999999999999999 5 4799999999999999873
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=4.3e-71 Score=538.61 Aligned_cols=211 Identities=41% Similarity=0.702 Sum_probs=197.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCC--CCCceEEEEeCC-CChhhhhhhccccccccccCceEEEe-------cCCeEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRK--DSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIV-------DNETISV 154 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~--~~~l~vVaInd~-~d~~~~ayLLkyDS~hG~F~g~V~v~-------~~~~L~i 154 (329)
|++||||||||||||+++|+|.++. .+++++|+|||+ .|+++++|||||||+||+|+++|+++ ++++|.|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 5689999999999999999943321 247999999995 89999999999999999999999983 5889999
Q ss_pred CCeEEEEEe-cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCC-CCC
Q 020217 155 DGKLIKVVS-NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDH-EVA 232 (329)
Q Consensus 155 nGk~I~V~~-~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~-~~~ 232 (329)
||++|+|++ +++|+++||+++|+||||||||.|+++++++.|+++||||||||+|+++ |+||||||||++.|++ + +
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~-~ 158 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASG-GAKTLVMGVNHHEYNPSE-H 158 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBS-SCEECCTTTTGGGCCTTT-C
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC-CCCeEEeccCHHHcCCCC-C
Confidence 999999998 9999999999999999999999999999999999999999999999975 7899999999999987 5 8
Q ss_pred ceEEcCCchhhhhhhHHHhh-hhhcCceEEEEEEEeeccCCCCCCC-CC-cchhhhhccccccCCCch
Q 020217 233 NIVSNASCTTNCLAPFVKVM-DEELGIVKGAMTTTHSYTGDQALGC-FT-QGLEESESCSVEHCPNEH 297 (329)
Q Consensus 233 ~IISnASCTTn~LaPvlKvL-~d~fGI~~g~vTTvHa~T~dQ~l~D-~~-~d~~r~r~a~~~i~p~~~ 297 (329)
+||||||||||||+|++|+| ||+|||++|+||||||||++|+++| ++ +||||+|++++||||.+.
T Consensus 159 ~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~t 226 (359)
T 3ids_C 159 HVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTT 226 (359)
T ss_dssp SEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEEC
T ss_pred CEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCC
Confidence 99999999999999999999 9999999999999999999999999 77 699999999999999873
No 6
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.2e-70 Score=532.10 Aligned_cols=207 Identities=43% Similarity=0.712 Sum_probs=197.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhccccccccccCc-eEEEecCCeEEECCeEEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~-~d~~~~ayLLkyDS~hG~F~g-~V~v~~~~~L~inGk~I~V~~ 163 (329)
++||||||||||||+++|+++++ +++++|+|||+ .|+++++|||||||+||+|++ +|+++++++|.|||++|+|++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~ 80 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEEC
T ss_pred ceEEEEECCChHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEE
Confidence 47999999999999999999986 47999999999 899999999999999999999 999964339999999999999
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhh
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
+++|+++||+++|+||||||||.|+++++++.|+++||||||||+|++ |+||||||||++.|+++ ++||||||||||
T Consensus 81 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn 157 (337)
T 3v1y_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTTN 157 (337)
T ss_dssp CSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHH
T ss_pred ecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeECCCCCHHHcCCC-CcEEecCchhhh
Confidence 999999999999999999999999999999999999999999999986 68999999999999986 899999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC-cchhhhhccccccCCCch
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT-QGLEESESCSVEHCPNEH 297 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~-~d~~r~r~a~~~i~p~~~ 297 (329)
||+|++|+|||+|||++++||||||||++|+++| .+ +||||+|++++||||...
T Consensus 158 ~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~t 213 (337)
T 3v1y_O 158 CLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSST 213 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEEC
T ss_pred hHHHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCC
Confidence 9999999999999999999999999999999999 55 799999999999999874
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=1.2e-69 Score=526.73 Aligned_cols=205 Identities=44% Similarity=0.714 Sum_probs=196.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~-~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.++||||||||||||+++|+++++ + +++|+|||+ .|+++++|||||||+||+|+++|++ ++++|.|||++|+|++
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~--~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~ 81 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEK--G-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RNGQLVVDNHEISVYQ 81 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--T-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CeeEEEEECCChHHHHHHHHHHhC--C-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEE-cCCEEEECCEEEEEEe
Confidence 458999999999999999999986 2 999999997 7999999999999999999999998 5889999999999999
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCC-CCCceEEcCCchh
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDH-EVANIVSNASCTT 242 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~-~~~~IISnASCTT 242 (329)
+++|++|||+++|+||||||||.|+++++++.|+++||||||||+|++ |+||||||||++.|++ + ++|||||||||
T Consensus 82 e~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~--d~plvV~gVN~~~~~~~~-~~IISNasCTT 158 (346)
T 3h9e_O 82 CKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP--DAPMFVMGVNENDYNPGS-MNIVSNASCTT 158 (346)
T ss_dssp CSSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTTT-CSEEECCCHHH
T ss_pred cCChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeeCcccCHHHcCccc-CCEEECCcchh
Confidence 999999999999999999999999999999999999999999999986 6899999999999987 5 89999999999
Q ss_pred hhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC-cchhhhhccccccCCCc
Q 020217 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT-QGLEESESCSVEHCPNE 296 (329)
Q Consensus 243 n~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~-~d~~r~r~a~~~i~p~~ 296 (329)
|||+|++|+|||+|||++++||||||||++|+++| ++ +|||++|++++||||..
T Consensus 159 n~Lap~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~ 214 (346)
T 3h9e_O 159 NCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPAS 214 (346)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEEC
T ss_pred hhHHHHHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeeccc
Confidence 99999999999999999999999999999999999 54 79999999999999987
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=8.1e-70 Score=529.16 Aligned_cols=208 Identities=48% Similarity=0.787 Sum_probs=198.4
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.|++||||||||||||+++|+|+++ +++||+|||+.|+++++|||||||+||+|+++++. ++++|+|||++|+|++
T Consensus 19 ~~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~ 94 (356)
T 3hja_A 19 PGSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVES-RDGAIVVDGREIKIIA 94 (356)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEE-cCCEEEECCEEEEEEE
Confidence 3568999999999999999999997 48999999999999999999999999999999998 4789999999999999
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCC----hhhHHHHHH-cCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQ-AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNA 238 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~----~e~a~~Hl~-aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnA 238 (329)
+++|+++||+++|+||||||||.|++ +++++.|++ +||||||||+|+++ ++||||||||++.|+++ ++|||||
T Consensus 95 ~~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d-~vp~vV~gVN~~~~~~~-~~IISNa 172 (356)
T 3hja_A 95 ERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKD-EIKTIVLGVNDHDINSD-LKAVSNA 172 (356)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSS-CCEECCTTTSGGGCCTT-CCEEECC
T ss_pred cCChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCC-CCCEEeccCCHHHcCcC-ccEEECC
Confidence 99999999999999999999999999 999999999 99999999999987 78999999999999986 7999999
Q ss_pred CchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCch
Q 020217 239 SCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNEH 297 (329)
Q Consensus 239 SCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~~ 297 (329)
|||||||+|++|+|||+|||++++||||||||++|+++| +++||||+|++++||||...
T Consensus 173 SCTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~t 232 (356)
T 3hja_A 173 SCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTST 232 (356)
T ss_dssp CHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTSCEEEEC
T ss_pred ccchhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcccccccccccccEEEcCCC
Confidence 999999999999999999999999999999999999999 88999999999999999864
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.3e-66 Score=503.90 Aligned_cols=207 Identities=43% Similarity=0.762 Sum_probs=197.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~-~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
+||||||||||||+++|+|+++. .+++++|+|||+.|+++++|||+|||+||+|+++|+.+ +++|.+||+.|+|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~-~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVN-GSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEE-TTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEe-CCEEEECCEEEEEEEcC
Confidence 69999999999999999999872 24699999999999999999999999999999999985 88999999999999999
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEcCCchhhh
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNC 244 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISnASCTTn~ 244 (329)
+|++++|++.|+||||||||.|+++++++.|+++||||||||+|+++ |+| |||||||++.|++. ++|||||||||||
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~-dvp~~vV~gVN~~~~~~~-~~IISNasCTTn~ 158 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGA-DVDATVVYGVNHGTLKST-DTVISNASCTTNC 158 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCT-TSSEECCTTTSGGGCCTT-CCEEECCCHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccC-CCCceEEccCCHHHhCcC-ccEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999963 799 99999999999975 7999999999999
Q ss_pred hhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 245 LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
|+|++|+|||+|||++++||||||||++|+++| .++||||+|++++||||..
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~~d~r~~r~~a~NiIP~~ 211 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTK 211 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTTCCEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccccccccccchhhccccCC
Confidence 999999999999999999999999999999999 8899999999999999987
No 10
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=2e-66 Score=503.82 Aligned_cols=207 Identities=52% Similarity=0.855 Sum_probs=196.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||||||||||+++|+|+++ +++++|+|||+.++++++|||+|||+||+|+++|+. ++++|.+||+.|+|+++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~--~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~-~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGR--EEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEA-KDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTC--TTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCChHHHhhhhhcccccccCCCcEEE-cCCEEEECCEEEEEEEc
Confidence 347999999999999999999886 479999999988999999999999999999999998 48899999999999999
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEcCCchhh
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
++|++++|+++|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++..++||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~--dvp~~vV~gVN~~~~~~~~~~IISNasCTTn 155 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK--NPDITVVLGVNEEKYNPKEHNIISNASCTTN 155 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB--SCSEECCTTTSGGGCCTTTCCEEECCCHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC--CCCceEEcCcCHHHhcccCCeEEECCChHHH
Confidence 99999999999999999999999999999999999999999999986 699 999999999998732789999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
||+|++|+|||+|||++++||||||||++|+++| +++||||+|++++||||..
T Consensus 156 ~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~~d~r~~r~~a~NiIP~~ 209 (342)
T 2ep7_A 156 CLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTT 209 (342)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEEC
T ss_pred HHHHHHHHHHHHcCeeEEEEEEEeecccchhhhcCCcchhhhhhhHhhCccCCC
Confidence 9999999999999999999999999999999999 8899999999999999987
No 11
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=5.1e-66 Score=501.39 Aligned_cols=206 Identities=42% Similarity=0.703 Sum_probs=197.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd-~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
.+||||||||||||+++|+++++ ++++||+||| ..++++++|||||||+||+|+++|+.+ +++|.+||+.|+|+++
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~--~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~-~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGR--KDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA-DGFLLIGEKKVSVFAE 87 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEE-TTEEEESSCEEEEECC
T ss_pred heEEEEeCCchHHHHHHHHHhhC--CCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEc-CCEEEECCEEEEEEEc
Confidence 57999999999999999999986 5799999999 589999999999999999999999985 8899999999999999
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhh
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~ 244 (329)
++|++++|+++|+||||||||.|+++++++.|+++||||||||+|+++ |+||||||||++.|++. ++|||||||||||
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~-dvplvV~gVN~~~~~~~-~~IISNasCTTn~ 165 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD-DTPIYVMGINHHQYDTK-QLIVSNASCTTNC 165 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHhCCC-CCEEECCchHHHH
Confidence 999999999999999999999999999999999999999999999974 68999999999999975 7999999999999
Q ss_pred hhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC---cchhhhhccccccCCCc
Q 020217 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT---QGLEESESCSVEHCPNE 296 (329)
Q Consensus 245 LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~---~d~~r~r~a~~~i~p~~ 296 (329)
|+|++|+|||+|||++++||||||||++|+++| .+ +||||+|++++||||..
T Consensus 166 Lap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~ 221 (345)
T 2b4r_O 166 LAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPAS 221 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCC
Confidence 999999999999999999999999999999999 76 89999999999999986
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.3e-61 Score=467.85 Aligned_cols=205 Identities=48% Similarity=0.779 Sum_probs=195.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||||||||||+++|+|+++ ++++|+|||+.|+++++|||+|||+||+|.++|+. +++.|.+||+.|+++++++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAY-DDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEE-cCCEEEECCEEEEEEecCC
Confidence 4899999999999999999986 58999999999999999999999999999999998 4788999999999999899
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~La 246 (329)
|++++|+++|+||||||||.|+++++++.|+++||||||||+|+++ ++|+||||||++.|++..++||||||||||||+
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d-~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~la 155 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKG-EDITIVMGVNHEAYDPSRHHIISNASCTTNSLA 155 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcC-CCCEEeeccCHHHhCcCCCCEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999874 689999999999998622689999999999999
Q ss_pred hHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 247 PFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 247 PvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
|++|+|||+|||++++|||||+||++|+++| +|+||||+|++++||||..
T Consensus 156 p~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~~d~r~~r~~a~NiIP~~ 206 (331)
T 2g82_O 156 PVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTT 206 (331)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEEC
T ss_pred HHHHHHHHhcCccEEEEEEEeecccccchhccccccccccchhhhCccccC
Confidence 9999999999999999999999999999999 8899999999999999986
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=3.3e-61 Score=472.81 Aligned_cols=210 Identities=55% Similarity=0.964 Sum_probs=198.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||||||||||+++|+|+++..+++++|+|||+.++++++|||+|||+||+|.++|+. +++.|.+||+.|+++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEE-eCCeEEECCeEEEEEec
Confidence 35799999999999999999998733569999999999999999999999999999999998 47889999999999999
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEcCCchhh
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
++|++++|++.|+||||||||.|.++++++.|+++|+||||||+|+++ ++| +||||||++.|++.+++||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d-~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKA-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCC-CCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 999999999889999999999999999999999999999999999873 578 999999999998733689999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
||+|++|+|||+|||++++|||||+||++|+++| .|+||||+|++++||||..
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~~d~r~gR~aa~NiIP~~ 212 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTT 212 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCGGGCCEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccchhhhhhcchHhhCeEecc
Confidence 9999999999999999999999999999999999 8999999999999999986
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=1.5e-60 Score=461.70 Aligned_cols=208 Identities=72% Similarity=1.191 Sum_probs=198.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||||||||||+++|+|+++.++++++|+|||..++++++|||+|||+||+|.++|...+++.|.+||+.|+++++++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~d 81 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN 81 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecCC
Confidence 69999999999999999999875578999999999999999999999999999999998325778999999999999999
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~La 246 (329)
|++++|+++|+||||||||.|++++.++.|+++|+|+|+||+|.++ |+|+||||||++.|++. ++||||||||||||+
T Consensus 82 p~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~-d~p~~V~GVN~~~~~~~-~~IIsNasCtTn~la 159 (337)
T 1rm4_O 82 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKG-DIPTYVVGVNEEGYTHA-DTIISNASCTTNCLA 159 (337)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCCBCCTTTTGGGCCTT-CSEEECCCHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccC-CCCeEeecCCHHHhCCC-CeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999874 68999999999999865 789999999999999
Q ss_pred hHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 247 PFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 247 PvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
|++|+|||+|||++++|||||+||++|+++| +|+||||+|++++||||..
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~~~~r~~r~~a~NiiP~~ 210 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTS 210 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTTCCEEEC
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccchhhcchhhhccchhhhcCccccc
Confidence 9999999999999999999999999999999 9999999999999999986
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=3.9e-60 Score=458.61 Aligned_cols=210 Identities=56% Similarity=0.974 Sum_probs=198.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||||||||||+++|+|.++..+++++|+|||..++++++|||+|||+||+|.++|+. +++.|.+||+.|+++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEE-cCCeeeecCceEEEEec
Confidence 35799999999999999999998733579999999999999999999999999999999998 47889999999999999
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEcCCchhh
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
++|++++|++.|+||||||||.|.+++.++.|+++|+||||||+|+++ ++| +||||||++.|++..++||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~-~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKG-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCC-CCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 999999999999999999999999999999999999999999999873 588 999999999999733789999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCc
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~ 296 (329)
||+|++|+||++|||++++|||||+||++|+++| .|+||||+|++++||||..
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~~d~r~~r~a~~NiiP~~ 212 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTT 212 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTSCCEEEE
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccchhhhhccccHHHceEccc
Confidence 9999999999999999999999999999999999 8999999999999999986
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=2e-58 Score=445.95 Aligned_cols=208 Identities=48% Similarity=0.773 Sum_probs=196.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||||||||||+++|+|.++ +++++|+||+..++++++|||+|||+||+|.++++.+ ++.|.++|+.|+++++++
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~--~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~-~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKN--PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVN-GNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTC--TTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEE-TTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCC--CCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEc-cCcEEECCEEEEEEecCC
Confidence 6999999999999999999876 5799999999889999999999999999999999984 788999999999998899
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~La 246 (329)
|++++|++.|+|+||||||.|++++.++.|+++|+||||||+|+++ ++|++|||||++.|++..++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d-~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~la 157 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKN-EDITIVMGVNQDKYDPKAHHVISNASCTTNCLA 157 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCcc-CCCEeccccCHHHhCccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999874 579999999999998622689999999999999
Q ss_pred hHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCchh
Q 020217 247 PFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNEHR 298 (329)
Q Consensus 247 PvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~~~ 298 (329)
|+||+|+|+|||++++|||||++|++|+++| .|+|||++|++++||+|..+.
T Consensus 158 p~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~~~~r~~r~~a~NiiP~~tg 210 (334)
T 3cmc_O 158 PFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTG 210 (334)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTCCEEEECS
T ss_pred HHHHHHHHhcCceeeeEEEEEeccchhhhccccccccccchhhhhCEEeeccC
Confidence 9999999999999999999999999999999 889999999999999998853
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=5.8e-58 Score=446.14 Aligned_cols=209 Identities=42% Similarity=0.720 Sum_probs=193.3
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd-~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
.+++||||||||||||+++|+|+++ ++++||+||| ..++++++|||+|||+||+|.++++. +++.|.+||+.|+++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~--p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~-~~~~l~v~g~~i~v~ 91 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMER--NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SGKDLCINGKVVKVF 91 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTC--SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEE-CC-CEEETTEEEEEE
T ss_pred CcceEEEEECCCHHHHHHHHHHHcC--CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEE-eCCEEEECCeEEEEE
Confidence 3457999999999999999999987 5799999999 58999999999999999999999988 478899999999999
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchh
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTT 242 (329)
++++|++++|++.|+||||||||.|++++.+++|+++|+||||||+|+++ ++|++|||||++.|++..++|||||||||
T Consensus 92 ~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd-~~p~~V~GVN~~~~~~~~~~IISNpsCtT 170 (354)
T 3cps_A 92 QAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKD-NVPMYVMGVNNTEYDPSKFNVISNASCTT 170 (354)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS-CCCBCCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCC-CCCEEEeccCHHHhCcCCCcEEECCCcHH
Confidence 99999999998889999999999999999999999999999999999864 58999999999999863268999999999
Q ss_pred hhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC---cchhhhhccccccCCCc
Q 020217 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT---QGLEESESCSVEHCPNE 296 (329)
Q Consensus 243 n~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~---~d~~r~r~a~~~i~p~~ 296 (329)
|||+|+||+|+|+|||+++.|||||+||++|+++| .+ +||||+|++++||||..
T Consensus 171 n~lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~ 228 (354)
T 3cps_A 171 NCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPAS 228 (354)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEE
T ss_pred HHHHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecC
Confidence 99999999999999999999999999999999999 77 79999999999999986
No 18
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.3e-57 Score=439.88 Aligned_cols=208 Identities=49% Similarity=0.730 Sum_probs=196.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||||||||||+++|+|.++..++++||+||+..++++++|||+|||+||+|.++|+. +++.|.+||+.|+++++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEY-TENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEE-cCCEEEECCeEEEEEecCC
Confidence 489999999999999999988632469999999988999999999999999999999998 4789999999999998899
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEcCCchhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISnASCTTn~L 245 (329)
|++++|++.|+|+||||||.|++++.+++|+++|+||||||+|++ |+| ++|||||++.|++. ++||||||||||||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~--d~p~~~V~eVN~~~i~~~-~~iIsNpsCttn~l 156 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK--GEDITVVIGCNEDQLKPE-HTIISCASCTTNSI 156 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB--SCSEECCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC--CCCceEEeccCHHHhCCC-CcEEECCccHHHHH
Confidence 999999999999999999999999999999999999999999985 589 99999999999864 78999999999999
Q ss_pred hhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCchh
Q 020217 246 APFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNEHR 298 (329)
Q Consensus 246 aPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~~~ 298 (329)
+|+||+|+++|||++++|||||++|++|+++| +++|||++|++++||+|..+.
T Consensus 157 ap~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~~~~~~~r~~a~NiiP~~tg 210 (332)
T 1hdg_O 157 APIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTG 210 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCT
T ss_pred HHHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcccccccchhHhhCcccccCC
Confidence 99999999999999999999999999999999 889999999999999999865
No 19
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=3.6e-57 Score=436.35 Aligned_cols=205 Identities=43% Similarity=0.720 Sum_probs=194.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||||||||||+++|+|.++ ++++||+||+..++++++|||+|||+||+|.++++. +++.|.+||+.|+++++++
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~--~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKR--SDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcC--CCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEE-cCCEEEECCEEEEEEEcCC
Confidence 6999999999999999999986 579999999988999999999999999999999987 4788999999999999999
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~La 246 (329)
|++++|.+.|+|+||||||.|.+++.++.|+++|+|+|+||+|.++ |+|++|||||++.|+ . ++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~-~~p~~V~GvN~~~~~-~-~~iIsNpsCtt~~la 155 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD-NTPMFVKGANFDKYA-G-QDIVSNASCTTNCLA 155 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCC-S-CSEEECCCHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCC-CCCeEeecCCHHHhC-C-CCEEEcCChHHHHHH
Confidence 9999999889999999999999999999999999999999999854 689999999999998 4 789999999999999
Q ss_pred hHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC-cchhhhhccccccCCCch
Q 020217 247 PFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT-QGLEESESCSVEHCPNEH 297 (329)
Q Consensus 247 PvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~-~d~~r~r~a~~~i~p~~~ 297 (329)
|+||+|+|+|||++++|||||++|++|+++| ++ +|+|++|++++||+|...
T Consensus 156 p~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~t 208 (330)
T 1gad_O 156 PLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSST 208 (330)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEEC
T ss_pred HHHHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCC
Confidence 9999999999999999999999999999999 76 799999999999999863
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=3e-57 Score=438.27 Aligned_cols=208 Identities=40% Similarity=0.672 Sum_probs=186.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHh---CCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~---r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
|++||||||||||||+++|+|.+ + +++++|+||+..++++++|||+|||+||+|.++++. +++.|.+||+.|++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~--~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRR--AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ-ERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGG--GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCC--CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEE-cCCeeEECCEEEEE
Confidence 35799999999999999999998 5 469999999988999999999999999999999998 47889999999999
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEcCCc
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASC 240 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISnASC 240 (329)
+++++|++++|++.|+|+||||||.|.+++.++.|+++|+||||||+|+. .|+| ++|||||++.|+++ .+|||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad-~d~p~~~V~gvN~~~~~~~-~~iIsnpsC 155 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGS-NDLDATVVYGVNQDQLRAE-HRIVSNASC 155 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCC-TTSSEECCTTTSGGGCCTT-CCEEECCCH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEecccc-CCCCceeecccCHHHhcCC-CCEEECCCc
Confidence 99999999999988999999999999999999999999999999999983 2688 99999999999875 689999999
Q ss_pred hhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CCcchhhhhccccccCCCch
Q 020217 241 TTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FTQGLEESESCSVEHCPNEH 297 (329)
Q Consensus 241 TTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~~d~~r~r~a~~~i~p~~~ 297 (329)
|||||+|++|+|+++|||++++|||||+||++|+++| .|+||||+|++++||||..+
T Consensus 156 ttn~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~~d~r~~r~a~~NiiP~~t 213 (339)
T 2x5j_O 156 TTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDT 213 (339)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEECCC-----------CTTTTSCCCCCCEEECC
T ss_pred HHHHHHHHHHHHHHccCcceeeEEEEEeccccccccccccccccchhhHHhCcccccC
Confidence 9999999999999999999999999999999999999 89999999999999999874
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=3.2e-56 Score=430.58 Aligned_cols=207 Identities=43% Similarity=0.716 Sum_probs=194.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhccccccccccC-ceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFK-ADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~-~d~~~~ayLLkyDS~hG~F~-g~V~v~~~~~L~inGk~I~V~ 162 (329)
|++||||||||||||+++|+|.++ +++++|+|||+ .++++++|||+|||+||+|. ++++..+++.|.+||+.|+++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~--p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCC--CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 457999999999999999999876 56999999995 79999999999999999999 998762367899999999999
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchh
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTT 242 (329)
++++|++++|.+.++|+||||||.|.+++.++.|+++|+||||||+|++ |+|++|||||++.|++. ++|||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~--d~p~~V~gvN~~~~~~~-~~iIsnpsCtt 156 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTT 156 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC--CCCEEEeccCHHHhCCC-CcEEECCChHH
Confidence 9999999999888999999999999999999999999999999999985 58999999999999865 78999999999
Q ss_pred hhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC-cchhhhhccccccCCCc
Q 020217 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT-QGLEESESCSVEHCPNE 296 (329)
Q Consensus 243 n~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~-~d~~r~r~a~~~i~p~~ 296 (329)
|||+|++|+|+|+|||++++|||+|++|++|+++| ++ +|||++|++++||+|..
T Consensus 157 ~~la~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~ 212 (337)
T 3e5r_O 157 NCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSS 212 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEE
T ss_pred HHHHHHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccC
Confidence 99999999999999999999999999999999999 77 69999999999999986
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=9.7e-56 Score=426.21 Aligned_cols=206 Identities=40% Similarity=0.699 Sum_probs=194.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC-CChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~-~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||||||||||||+++|+|.++ +++++|+|||+ .++++++||++|||+||+|.++++. +++.|.+||+.|++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~--~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~-~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNS--GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH--CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcC--CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEE-cCCeEEECCeEEEEEe
Confidence 457999999999999999999876 46999999995 8999999999999999999999988 4778999999999999
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhh
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
+++|++++|++.++|+||||||.|.+++.+++|+++|+|+|++|+|.+ |+|++|||||++.|++. ++||||||||||
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~--~~p~~V~gvN~~~~~~~-~~iIsnpsCtt~ 155 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA--DAPMFVMGVNHEKYDNS-LKIISNASCTTN 155 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CSEEECCCHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC--CCCeEEeccCHHHhCCC-CCEEECCChHHH
Confidence 999999999989999999999999999999999999999999999964 58999999999999864 789999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCC-CC-cchhhhhccccccCCCc
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGC-FT-QGLEESESCSVEHCPNE 296 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D-~~-~d~~r~r~a~~~i~p~~ 296 (329)
||+|+||+|+++|||++++|||+|++|++|+++| ++ +|||++|++++||+|..
T Consensus 156 ~l~~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~ 210 (335)
T 1u8f_O 156 CLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPAS 210 (335)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEE
T ss_pred HHHHHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceecc
Confidence 9999999999999999999999999999999999 77 79999999999999976
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.1e-43 Score=338.96 Aligned_cols=183 Identities=19% Similarity=0.233 Sum_probs=159.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhcccc--cccccc--CceE-EEecCCeEEECCeEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTF--KADV-KIVDNETISVDGKLI 159 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyD--S~hG~F--~g~V-~v~~~~~L~inGk~I 159 (329)
|++||||||||||||.++|+|.++ +++++|+|||. ++++++|||+|| ++||+| .+++ +. +++.|.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~--~~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~~-~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQ--DDMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKLF-EDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHHH-HHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeecc-cCCeEEECC---
Confidence 347999999999999999999886 46999999997 699999999999 999999 6666 43 345676766
Q ss_pred EEEecCCCCCCCCccCCCcEEEcCCCCCCChhhHH-HHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCCCCCceEEc
Q 020217 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG-KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSN 237 (329)
Q Consensus 160 ~V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~-~Hl~aGakkVIISAPsk~~DiP-~iV~GVN~~~~~~~~~~IISn 237 (329)
++.++.| ++|+|+||||.+.+.+.++ .|+++| ++||+++|++++++| +||||||++.|++ .+||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~--~~iIsn 141 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG--KDYVRV 141 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT--CSEEEE
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc--CCEEec
Confidence 3444556 8999999999999999996 999999 669999998642389 9999999999985 689999
Q ss_pred CCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCC
Q 020217 238 ASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPN 295 (329)
Q Consensus 238 ASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~ 295 (329)
||||||||+|+||+|||+|||+++.|||||++|+. + +++|++++||||.
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~------~---~~~r~~~~NiiP~ 190 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAADP------N---DDKTGPVNAITPN 190 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT------T---CSSCCCSSCCEES
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc------C---cchhhHHhcccCC
Confidence 99999999999999999999999999999999992 2 6678899999998
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-34 Score=277.26 Aligned_cols=179 Identities=19% Similarity=0.209 Sum_probs=148.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
+||+|+| ||+|||.++|+|.++..+.+++ +++...+ . +++.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l-------------~~~~s~~----------~-~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSEL-------------RLYASPR----------S-AGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCC-------------EEEECGG----------G-SSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEE-------------EEeeccc----------c-CCCEEEEcCceEEEEeC-
Confidence 4899999 9999999999999764332332 1222111 0 36778899999999876
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCCCCCceEEcCCchhhh
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~ 244 (329)
+|+ +| ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++|+|++|||||++.|+.. .+|||||||||||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~-~~iIanp~C~tt~ 129 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQH-RGIIANPNCTTAI 129 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGC-SSEEECCCHHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCC-CCEEECCCHHHHH
Confidence 565 68 89999999999999999999999999443334432 34478999999999999864 5799999999999
Q ss_pred hhhHHHhhhhhcCceEEEEEEEeeccCC------------CCCCC--CCcchhhhhccccccCCCc
Q 020217 245 LAPFVKVMDEELGIVKGAMTTTHSYTGD------------QALGC--FTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 245 LaPvlKvL~d~fGI~~g~vTTvHa~T~d------------Q~l~D--~~~d~~r~r~a~~~i~p~~ 296 (329)
++|+||+|+++|||+++.|+|+|+||++ |+++| .++|++++|.+++||+|..
T Consensus 130 ~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~ 195 (331)
T 2yv3_A 130 LAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHI 195 (331)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCC
T ss_pred HHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCccccc
Confidence 9999999999999999999999999999 99898 4579999999999999975
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=5.1e-33 Score=267.42 Aligned_cols=182 Identities=22% Similarity=0.265 Sum_probs=137.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||+|+| ||+||+.++|+|.++.++.+++++|++.. + .+..+.++|+.+.+..
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~------------~------------~G~~~~~~~~~i~~~~- 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER------------S------------EGKTYRFNGKTVRVQN- 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT------------T------------TTCEEEETTEEEEEEE-
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC------------C------------CCCceeecCceeEEec-
Confidence 47999999 99999999999998755679999998641 1 1334557777777733
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCCCC-CceEEcCCchh
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDHEV-ANIVSNASCTT 242 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k~~DiP~iV~GVN~~~~~~~~-~~IISnASCTT 242 (329)
.+++ +|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. .++++|++|||||++.|+..+ .+|||||||||
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 133 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCST 133 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHHH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChHH
Confidence 4554 785 89999999999999999999999999544445542 345789999999999998521 56999999999
Q ss_pred hhhhhHHHhhhhhcCceEEEEEEEeeccCCCC-CCC-CCc------------chhhhhccccccCCCc
Q 020217 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQA-LGC-FTQ------------GLEESESCSVEHCPNE 296 (329)
Q Consensus 243 n~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~-l~D-~~~------------d~~r~r~a~~~i~p~~ 296 (329)
||++|+|++|+++|||+++.|+|+|+||++|+ ++| .++ +++++|.+++|++|-.
T Consensus 134 t~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~ 201 (336)
T 2r00_A 134 IQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQI 201 (336)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCB
T ss_pred HHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCccccc
Confidence 99999999999999999999999999999986 888 543 7889999999999964
No 26
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.98 E-value=5.5e-34 Score=274.45 Aligned_cols=180 Identities=19% Similarity=0.195 Sum_probs=149.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhcccc--ccccccCceE-EEecCCeEEECCeEEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyD--S~hG~F~g~V-~v~~~~~L~inGk~I~V~~ 163 (329)
+||||+|+|+||+.++|+|.++ +++++++|++. ++++.+++++|| ++||.|.+.+ .. ++..+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQ--DDMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKLF-EKAGIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHTTCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcC--CCcEEEEEEcC-ChhHHHHhcCCcchhhccccccceeee-cCCceEEcCC------
Confidence 6999999999999999999875 46999999997 577888999888 8999988765 22 2234555442
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCC--CeEEeccCccccCCCCCceEEcCCch
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI--PTYVVGVNEKDYDHEVANIVSNASCT 241 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~Di--P~iV~GVN~~~~~~~~~~IISnASCT 241 (329)
++++.| ++|+||+|||.+.+.+.++.|+++|+ +||+++|.++ |+ |++|||||++.|++ .+||||||||
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~-d~~~~~~V~gvN~e~~~~--~~iIanp~C~ 141 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKH-EDIGLSFNSLSNYEESYG--KDYTRVVSCN 141 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCH-HHHSCEECHHHHGGGGTT--CSEEEECCHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCC-ccCCCeEEeeeCHHHhcC--CCEEEcCCcH
Confidence 222222 79999999999999999999999996 4888887742 55 99999999999985 5899999999
Q ss_pred hhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCC
Q 020217 242 TNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPN 295 (329)
Q Consensus 242 Tn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~ 295 (329)
||||+|+||+|+++|||+++.|||+|++|+. .+..|++++||+|.
T Consensus 142 tt~l~~~l~pL~~~~gI~~~~vtt~~a~s~p---------~~~~~~~~~NiiP~ 186 (337)
T 1cf2_P 142 TTGLCRTLKPLHDSFGIKKVRAVIVRRGADP---------AQVSKGPINAIIPN 186 (337)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEESSCT---------TCTTCCCSSCCEES
T ss_pred HHHHHHHHHHHHHhcCcceeEEEEEEEeecC---------CccccchhcCEEec
Confidence 9999999999999999999999999999981 14456789999996
No 27
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=99.98 E-value=7e-33 Score=266.84 Aligned_cols=183 Identities=13% Similarity=0.147 Sum_probs=151.9
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||+|+| ||+||+.++|.|.++..+.++++++++. +.. ++.+.++|+.+.+..
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~-------------~~~-----------g~~~~~~g~~i~~~~ 60 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA-------------ESA-----------GQRMGFAESSLRVGD 60 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT-------------TTT-----------TCEEEETTEEEECEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecC-------------CCC-----------CCccccCCcceEEec
Confidence 457999999 9999999999999765567899888763 111 233456777777643
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCC-ceEEcCCchh
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA-NIVSNASCTT 242 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~-~IISnASCTT 242 (329)
.+|+. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..++++|++|++||++.|+..++ +|||||||||
T Consensus 61 -~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 61 -VDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp -GGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 34543 75 899999999999999999999999998877788865657899999999999985312 7999999999
Q ss_pred hhhhhHHHhhhhhcCceEEEEEEEeeccCCCC-CCC-CC---cchhhh---------hccccccCCCc
Q 020217 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQA-LGC-FT---QGLEES---------ESCSVEHCPNE 296 (329)
Q Consensus 243 n~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~-l~D-~~---~d~~r~---------r~a~~~i~p~~ 296 (329)
||++|+|++|+++|||+++.|+|+|+||++|+ .+| .+ +|||++ |.+++||+|..
T Consensus 136 t~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~ 203 (340)
T 2hjs_A 136 AELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQV 203 (340)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSS
T ss_pred HHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccc
Confidence 99999999999999999999999999999997 577 44 688885 66799999964
No 28
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.97 E-value=2.8e-32 Score=261.09 Aligned_cols=180 Identities=18% Similarity=0.188 Sum_probs=150.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhcccc--ccccccCceE-EEecCCeEEECCeEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKV 161 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyD--S~hG~F~g~V-~v~~~~~L~inGk~I~V 161 (329)
|++||||+|||+|||.++|+|.++ +++++++|+|. +.++++++++|| ++||+|.+.+ .. +++.+.+++
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRF-EKEGFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHHTCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHHHHHhcCccccccccccceec-cCCceEEcC-----
Confidence 357999999999999999999876 46999999997 578889999988 8999998765 11 112232332
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCC-C-CeEEeccCccccCCCCCceEEcCC
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-I-PTYVVGVNEKDYDHEVANIVSNAS 239 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~D-i-P~iV~GVN~~~~~~~~~~IISnAS 239 (329)
+++++.| ++|+|++|||.+...+.+..|+++| |+||+++|.+. | . |++|+|||++.|.. .++|+|+|
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~-d~~~~~~v~~vn~~~~~~--~~ii~~~~ 140 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA-DVAEVSFVAQANYEAALG--KNYVRVVS 140 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG-GGSSEEECHHHHGGGGTT--CSEEEECC
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeeccccc-ccccceEEeccCHHHHhh--CCcEEecC
Confidence 3334434 7999999999999999999999999 67999998753 5 5 59999999999975 58999999
Q ss_pred chhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCC
Q 020217 240 CTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPN 295 (329)
Q Consensus 240 CTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~ 295 (329)
||||||+|++|+|++. |++|.|+|+|++|+.| |+.|++++||+|.
T Consensus 141 C~t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~---------~~~r~~~~niiP~ 185 (334)
T 2czc_A 141 CNTTGLVRTLSAIREY--ADYVYAVMIRRAADPN---------DTKRGPINAIKPT 185 (334)
T ss_dssp HHHHHHHHHHHHHGGG--EEEEEEEEEEESSCTT---------CCSCCCSSCCEEC
T ss_pred cHHHHHHHHHHHHHHH--hccccEEEEEEecCcc---------ccccChhhcEEec
Confidence 9999999999999987 9999999999999975 5678999999997
No 29
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.97 E-value=1.3e-31 Score=258.16 Aligned_cols=175 Identities=14% Similarity=0.154 Sum_probs=139.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||+|+|+|||.++|+|.++ +++++++|+|. ++++.+++++++- +.++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~--p~~elvav~d~-~~~~~~~~a~~~g-----------------------~~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ--PDMKLVGVAKT-SPNYEAFIAHRRG-----------------------IRIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-SCSHHHHHHHHTT-----------------------CCEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcC--CCCEEEEEEcC-ChHHHHHHHHhcC-----------------------cceecCcC
Confidence 6999999999999999999876 56999999997 5677778876531 11222223
Q ss_pred CCCCCCcc-------------CCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCc
Q 020217 167 PLQLPWAE-------------LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVAN 233 (329)
Q Consensus 167 P~~idW~~-------------~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~ 233 (329)
|+++ |.+ .++|+|++|||.+.+++.++.|+++|+|+|++|++.++...++||+|+|++.+.+ .+
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~--~~ 132 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG--KK 132 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT--CS
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC--CC
Confidence 3332 331 1789999999999999999999999999988888865423479999999776654 35
Q ss_pred eEEcCCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCCchhh
Q 020217 234 IVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPNEHRC 299 (329)
Q Consensus 234 IISnASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~~~~~ 299 (329)
+|||||||||||+|+||+|+++|||++++|||+|+++. .+++ .|++.++|+|..|.+
T Consensus 133 iIsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~------~~~~---~~~~~~niip~~~~i 189 (340)
T 1b7g_O 133 YIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD------QKEV---KKGPINSLVPDPATV 189 (340)
T ss_dssp EEEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC------TTCC---SCCCSSCCEESSSSS
T ss_pred CcccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC------cccc---hHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999999999874 3333 457788999864444
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.96 E-value=1.1e-31 Score=261.72 Aligned_cols=182 Identities=15% Similarity=0.109 Sum_probs=146.6
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR-~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+||||+| ||+||+.++| +|.+++ ++++.| ++|.||| +|+ .+. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~---~~~v~i----------~~~~~~s-~G~---~v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD---FDAIRP----------VFFSTSQ-LGQ---AAP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG---GGGSEE----------EEEESSS-TTS---BCC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC---CCeEEE----------EEEEeCC-CCC---Ccc-------ccCCCceEEEec
Confidence 6999999 9999999999 555442 343333 6777886 776 111 144566777665
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCC---CCCCCeEEeccCccccCCC--CC-ceEEcC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDHE--VA-NIVSNA 238 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk---~~DiP~iV~GVN~~~~~~~--~~-~IISnA 238 (329)
.+|++ |. ++|+||+|+|.+.+++.++.|+++|+|+|||++++. ++|+|++|+|||++.|+.. +. ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 55554 74 899999999999999999999999999899998863 4578999999999998741 11 699999
Q ss_pred CchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCC--C-----------------CC-CCc---chhh-----------
Q 020217 239 SCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQA--L-----------------GC-FTQ---GLEE----------- 284 (329)
Q Consensus 239 SCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~--l-----------------~D-~~~---d~~r----------- 284 (329)
||||+|++|+|++|+++|||+++.|+|||++|++++ . +| +++ ||||
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~ 213 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGEL 213 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccC
Confidence 999999999999999999999999999999999954 2 34 555 8988
Q ss_pred -----hhccccccCCCc
Q 020217 285 -----SESCSVEHCPNE 296 (329)
Q Consensus 285 -----~r~a~~~i~p~~ 296 (329)
++.+++|++|-.
T Consensus 214 ~~~~f~~~~a~NiiP~~ 230 (367)
T 1t4b_A 214 PVDNFGVPLAGSLIPWI 230 (367)
T ss_dssp CCTTTSSCCTTCEESCC
T ss_pred cccccchhhhCceEEEe
Confidence 488899999954
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.95 E-value=1.7e-28 Score=236.80 Aligned_cols=186 Identities=17% Similarity=0.190 Sum_probs=144.6
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+| ||+||+.++|+|.++ +.+++++|++. + .. .-.+||++|+.|. ++.+.++++.+.+ .
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~s-~-~~--~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~ 68 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKH--PYLELVKVSAS-P-SK--IGKKYKDAVKWIE-------QGDIPEEVQDLPI-V 68 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTC--SSEEEEEEECC-G-GG--TTSBHHHHCCCCS-------SSSCCHHHHTCBE-E
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhC--CCcEEEEEecC-h-hh--cCCCHHHhcCccc-------ccccccCCceeEE-e
Confidence 358999999 999999999999876 56999999842 1 01 1123688887653 1223333444444 3
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCCC---------C
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE---------V 231 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs---k~~DiP~iV~GVN~~~~~~~---------~ 231 (329)
+.+++. |. ++|+||+|||.+.+.+.++.|+++|++ ||++++ .++|+|++|+|||++.|... +
T Consensus 69 ~~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 142 (350)
T 2ep5_A 69 STNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWK 142 (350)
T ss_dssp CSSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCS
T ss_pred eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccC
Confidence 335543 53 899999999999999999999999995 677665 33478999999999988720 1
Q ss_pred CceEEcCCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCCc
Q 020217 232 ANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 232 ~~IISnASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~~ 296 (329)
.+|||||+|+|||++|+|++|+++|||+++.|+|+|+||++|+.. . ..++++.||+|-.
T Consensus 143 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~~-~-----~~~~~~~ni~py~ 201 (350)
T 2ep5_A 143 GILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYNG-I-----SFMAIEGNIIPYI 201 (350)
T ss_dssp SEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSSS-S-----BHHHHTTCCBCCC
T ss_pred ceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCCC-C-----CChHHhCCEEecc
Confidence 469999999999999999999999999999999999999999982 2 2567899999975
No 32
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.94 E-value=2.4e-28 Score=236.99 Aligned_cols=175 Identities=13% Similarity=0.108 Sum_probs=137.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||+|+| ||+|||.++|+|.++ +.+++++|++..+.. ++||++||+|.+.+ + ..+ .+ .
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~~~~~g-----~~~~~~~~~~~~~v-~---~dl-------~~-~- 75 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH--PHFQVTLMTADRKAG-----QSMESVFPHLRAQK-L---PTL-------VS-V- 75 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC--SSEEEEEEBCSTTTT-----SCHHHHCGGGTTSC-C---CCC-------BC-G-
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC--CCcEEEEEeCchhcC-----CCHHHhCchhcCcc-c---ccc-------ee-c-
Confidence 47999999 999999999999876 569999999852221 57899999987653 1 011 11 1
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCC-C---------------CCeEEecc---
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGA-D---------------IPTYVVGV--- 222 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs---k~~-D---------------iP~iV~GV--- 222 (329)
+ ++ .|. ++|+||+|||.+.+++.++.| ++|++ ||+.++ .++ + .|++|||+
T Consensus 76 -~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~~--VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 76 -K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTALK--IVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp -G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTCE--EEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred -c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCCE--EEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 1 23 575 899999999999999999999 99994 555443 221 0 04677776
Q ss_pred CccccCCCCCceEEcCCchhhhhhhHHHhhhhhcCce--EEEEEEEeeccCCCC-CCC-CCcchhhhhccccccCCC
Q 020217 223 NEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQA-LGC-FTQGLEESESCSVEHCPN 295 (329)
Q Consensus 223 N~~~~~~~~~~IISnASCTTn~LaPvlKvL~d~fGI~--~g~vTTvHa~T~dQ~-l~D-~~~d~~r~r~a~~~i~p~ 295 (329)
|++.|+. .+|||||||+|||++|+|++|+++|||+ ++.|+|+|+|||+|+ .+| .|.++ ++.||+|.
T Consensus 148 n~~~i~~--~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~ni~py 217 (359)
T 1xyg_A 148 LREDIKK--ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSE-----IAEGISSY 217 (359)
T ss_dssp HHHHHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGBHHH-----HTTCCEEC
T ss_pred CHHHhcc--CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhhhHH-----HhcCeecc
Confidence 9999975 5899999999999999999999999999 999999999999999 577 66543 45777764
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=9.5e-28 Score=231.40 Aligned_cols=187 Identities=20% Similarity=0.255 Sum_probs=143.3
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd-~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
|++||+|+| ||+||+.++|+|.++ +.+++++|++ .... --+||+.|+.|.. ..+..+++.+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~--p~~ev~~i~~s~~~~-----g~~~~~~~~~~~~-------~~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADH--PMFELTALAASERSA-----GKKYKDACYWFQD-------RDIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT-----TSBHHHHSCCCCS-------SCCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcC--CCCEEEEEEcccccc-----cccHHHhcccccc-------cccccCceeeEE-
Confidence 568999999 999999999999876 5699999974 2110 1125777776521 011112223333
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCC---CCCCCeEEeccCccccCC-C--------
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDH-E-------- 230 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk---~~DiP~iV~GVN~~~~~~-~-------- 230 (329)
.+.++++ |.+.++|+||+|+|.+.+.+.++.|+++|++ ||++++. +++.|++|+|||++.|.. +
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 2235554 7545899999999999999999999999984 7888763 346899999999998863 0
Q ss_pred CCceEEcCCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCCc
Q 020217 231 VANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 231 ~~~IISnASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~~ 296 (329)
+.+||+||+|+|||++|+|++|+++|||+++.|+|+|+||++|+.. .+ .++++.||+|-.
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~~-~~-----~~~~~~ni~py~ 207 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNG-VP-----SMAILDNLIPFI 207 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTTT-SC-----HHHHTTCCBSCC
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCccc-cc-----chHHhCCEEecc
Confidence 1469999999999999999999999999999999999999999983 22 356788999974
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.94 E-value=3.2e-27 Score=227.81 Aligned_cols=175 Identities=15% Similarity=0.024 Sum_probs=135.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||+|+| ||+|||.++|+|.++ +.+++++|++..+. -.+|+++|+.|.+.. .+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elv~v~s~~~~-----g~~~~~~~~~~~g~~-------------~~~~--- 60 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH--PYLEVKQVTSRRFA-----GEPVHFVHPNLRGRT-------------NLKF--- 60 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC--TTEEEEEEBCSTTT-----TSBGGGTCGGGTTTC-------------CCBC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEECchhh-----CchhHHhCchhcCcc-------------cccc---
Confidence 47999999 999999999999876 56999999885221 146889999886421 1112
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCC-C--------------CCeEEecc---Ccc
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGA-D--------------IPTYVVGV---NEK 225 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k~~-D--------------iP~iV~GV---N~~ 225 (329)
.+++ +|. ++|+||+|+|.+.+.+.++.|+++|++.|.+|++. .++ + .|.+|+|+ |++
T Consensus 61 ~~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~ 136 (345)
T 2ozp_A 61 VPPE--KLE--PADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYRE 136 (345)
T ss_dssp BCGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHH
T ss_pred cchh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHH
Confidence 1222 373 89999999999999999999999999644445532 221 0 03566666 999
Q ss_pred ccCCCCCceEEcCCchhhhhhhHHHhhhhhcCce--EEEEEEEeeccCCCC-CCC-CCcchhhhhccccccCC
Q 020217 226 DYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQA-LGC-FTQGLEESESCSVEHCP 294 (329)
Q Consensus 226 ~~~~~~~~IISnASCTTn~LaPvlKvL~d~fGI~--~g~vTTvHa~T~dQ~-l~D-~~~d~~r~r~a~~~i~p 294 (329)
.|+. .+|||||||+|||++|+|++|+++|+|+ ++.|+|+|+||++|+ .+| .|.++ ++.||+|
T Consensus 137 ~i~~--~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~n~~p 202 (345)
T 2ozp_A 137 ALKG--ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPE-----RAGSIRV 202 (345)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGCHHH-----HTTCCEE
T ss_pred Hhhc--CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccccchh-----hcccccc
Confidence 9975 5899999999999999999999999999 999999999999997 467 66543 4667776
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.92 E-value=2.4e-25 Score=217.48 Aligned_cols=160 Identities=18% Similarity=0.253 Sum_probs=129.5
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||+|.| +|.+|+.++|+|.+++++.++++.+... .| .++.+.+.|+.+.+..
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~------------~s------------aG~~~~~~~~~~~~~~ 56 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA------------RS------------AGKSLKFKDQDITIEE 56 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT------------TT------------TTCEEEETTEEEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc------------cc------------CCCcceecCCCceEee
Confidence 568999999 9999999999998875545565544321 01 3556667777666633
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCCCCCceEEcCCchh
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k~~DiP~iV~GVN~~~~~~~~~~IISnASCTT 242 (329)
-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++++|++|||||++.|+.. .+|||||+|+|
T Consensus 57 -~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~-~~iIanpgC~t 130 (366)
T 3pwk_A 57 -TTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAH-NGIIACPNCST 130 (366)
T ss_dssp -CCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTC-CSEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCC-CCeEECCCcHH
Confidence 33443 43 89999999999999999999999999655555553 45678999999999999864 68999999999
Q ss_pred hhhhhHHHhhhhhcCceEEEEEEEeeccCCCC
Q 020217 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQA 274 (329)
Q Consensus 243 n~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~ 274 (329)
||++|+|++|++.|||+++.|+|+|++|+..+
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~ 162 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGM 162 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCH
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCc
Confidence 99999999999999999999999999999887
No 36
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.92 E-value=5.6e-25 Score=213.18 Aligned_cols=159 Identities=22% Similarity=0.338 Sum_probs=127.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
+||||.| +|.+|+.++|+|.+++++.++++.+... +. .++.+.+.|+.+.+.. -
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~~-----------aG~~~~~~~~~~~~~~-~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------RS-----------QGRKLAFRGQEIEVED-A 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------TT-----------SSCEEEETTEEEEEEE-T
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------cc-----------CCCceeecCCceEEEe-C
Confidence 6899999 9999999999999886555665554321 11 3556667887776633 3
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEeccCc-cccCCCCCceEEcCCchhh
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNE-KDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP-sk~~DiP~iV~GVN~-~~~~~~~~~IISnASCTTn 243 (329)
+++ +|. ++|+||+|+|.+.+++.++.|+++|++.|-+|++ .+++|+|++|||||+ +.|+..+.+|||||+|+||
T Consensus 57 ~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~tt 132 (344)
T 3tz6_A 57 ETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTM 132 (344)
T ss_dssp TTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHHH
T ss_pred CHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcHHH
Confidence 343 443 8999999999999999999999999943333443 245688999999999 8887532589999999999
Q ss_pred hhhhHHHhhhhhcCceEEEEEEEeeccCCCC
Q 020217 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQA 274 (329)
Q Consensus 244 ~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~ 274 (329)
|++|+|++|+++|||+++.|+|+|+||+..+
T Consensus 133 ~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~ 163 (344)
T 3tz6_A 133 AAMPVLKVLHDEARLVRLVVSSYQAVSGSGL 163 (344)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCH
T ss_pred HHHHHHHHHHHhCCCceEEEEeccCCCccCh
Confidence 9999999999999999999999999999887
No 37
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.91 E-value=7.6e-26 Score=221.32 Aligned_cols=159 Identities=18% Similarity=0.113 Sum_probs=124.2
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEE-ECCeEEEEEe
Q 020217 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVVS 163 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR-~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~-inGk~I~V~~ 163 (329)
+||||+| +|.+|+.|+| +|.+++++.++++.+... + -|+ .+. +.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~-aG~-----------~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-------------Q-IGV-----------PAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------S-TTS-----------BCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-------------c-cCc-----------CHHHhCCCceEEEe
Confidence 5899999 9999999999 998886545676555331 1 121 110 2333333333
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCCC-CC--ceEEc
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVSN 237 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs---k~~DiP~iV~GVN~~~~~~~-~~--~IISn 237 (329)
..+++. |. ++|+||+|+|.+.+++.++.|+++|+|++||++++ +++|+|++|||||++.|+.. ++ ++|||
T Consensus 56 ~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 223332 33 89999999999999999999999999989999886 45578999999999988641 02 35999
Q ss_pred CCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCC
Q 020217 238 ASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQA 274 (329)
Q Consensus 238 ASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~ 274 (329)
|+|||||++|+|++|+++|||+++.|+|+|++|+..+
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~ 168 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGA 168 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCH
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccCh
Confidence 9999999999999999999999999999999999876
No 38
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.91 E-value=1.4e-25 Score=220.01 Aligned_cols=160 Identities=16% Similarity=0.081 Sum_probs=124.1
Q ss_pred eeeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEE-ECCeEEEEE
Q 020217 86 KLKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVV 162 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR-~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~-inGk~I~V~ 162 (329)
++||||+| +|.+|+.|+| +|.+++++.++++.+... + -| +.+. +.|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~-aG-----------~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-------------N-AG-----------GKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------C-TT-----------SBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-------------h-cC-----------CCHHHcCCCceEEE
Confidence 47999999 9999999999 998886545666555321 1 01 1110 233333332
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCCC-CCc--eEE
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VAN--IVS 236 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs---k~~DiP~iV~GVN~~~~~~~-~~~--IIS 236 (329)
...+++. |. ++|+||+|+|.+.+++.++.|+++|+|++||++++ +++|+|++|||||++.|+.. +++ +|+
T Consensus 59 ~~~~~~~--~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--LK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--hc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 2222322 43 89999999999999999999999999888999886 45578999999999988641 023 499
Q ss_pred cCCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCC
Q 020217 237 NASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQA 274 (329)
Q Consensus 237 nASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~ 274 (329)
||+|||||++|+|++|+++|||+++.|+|+|++|+..+
T Consensus 135 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~ 172 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGA 172 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCH
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccch
Confidence 99999999999999999999999999999999999876
No 39
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.90 E-value=1.1e-24 Score=211.89 Aligned_cols=185 Identities=18% Similarity=0.212 Sum_probs=133.8
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC--CChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~--~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+++||||.| +|.+|+.++|+|.++ +.++++.+... .+- .+...+.+. .|..+.. +++.+.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saGk-~~~~~~p~~-~~~~~~~------------~~~~~~v 69 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVGK-PYGEVVRWQ-TVGQVPK------------EIADMEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTTS-BHHHHCCCC-SSSCCCH------------HHHTCBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcCC-ChhHhcccc-ccccccc------------ccccceE
Confidence 458999999 999999999988776 46788777432 111 111110000 0000100 0001122
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCC--C-------C
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDH--E-------V 231 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k~~DiP~iV~GVN~~~~~~--~-------~ 231 (329)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. .++++|++|+|||.+.|+. . +
T Consensus 70 -~~~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpk_A 70 -KPTDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1123333 32 89999999999999999999999999887778774 4567899999999998853 1 0
Q ss_pred CceEEcCCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCCc
Q 020217 232 ANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 232 ~~IISnASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~~ 296 (329)
.+|||||+|+|+|++|+|++|+++|||+++.|+|+|+|||+|+. ..+ .++++.|++|-.
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~-~~~-----~~~~~~N~ipy~ 203 (359)
T 4dpk_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP-GIP-----SLDVVDNILPLG 203 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS-CSB-----GGGTTTCCEECC
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc-Ccc-----ChHHhCCeEeec
Confidence 25999999999999999999999999999999999999999997 322 246788888854
No 40
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.90 E-value=1.1e-24 Score=211.89 Aligned_cols=185 Identities=18% Similarity=0.212 Sum_probs=133.7
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC--CChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~--~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+++||||.| +|.+|+.++|+|.++ +.++++.+... .+- .+...+.+. .|..+.. +++.+.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saGk-~~~~~~p~~-~~~~~~~------------~~~~~~v 69 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVGK-PYGEVVRWQ-TVGQVPK------------EIADMEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTTS-BHHHHCCCC-SSSCCCH------------HHHTCBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcCC-ChhHhcccc-ccccccc------------ccccceE
Confidence 458999999 999999999988776 46788777432 111 111110000 0000100 0001122
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCC--C-------C
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDH--E-------V 231 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k~~DiP~iV~GVN~~~~~~--~-------~ 231 (329)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. .++++|++|+|||.+.|+. . +
T Consensus 70 -~~~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpl_A 70 -KPTDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1123333 32 89999999999999999999999999887778774 4567899999999998853 1 0
Q ss_pred CceEEcCCchhhhhhhHHHhhhhhcCceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCCc
Q 020217 232 ANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 232 ~~IISnASCTTn~LaPvlKvL~d~fGI~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~~ 296 (329)
.+|||||+|+|+|++|+|++|+++|||+++.|+|+|+|||+|+. ..+ .++++.|++|-.
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~-~~~-----~~~~~~N~ipy~ 203 (359)
T 4dpl_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP-GIP-----SLDVVDNILPLG 203 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS-CSB-----HHHHTTCCEECC
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc-Ccc-----ChHHhCCeEeec
Confidence 25999999999999999999999999999999999999999997 322 246778888854
No 41
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.89 E-value=1.4e-23 Score=203.60 Aligned_cols=183 Identities=11% Similarity=0.014 Sum_probs=142.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCC-CC--CceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~-~~--~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
++||+|+| +|+||+.++|.|.+++ ++ .+++++++...+... ++++.|+.|.+... +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk-----~~~~~~~~l~~~~~-------------~~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS-----TLGEHHPHLTPLAH-------------RVV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS-----BGGGTCTTCGGGTT-------------CBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC-----chhhhcccccccce-------------eee
Confidence 47999999 9999999999998763 11 689998875321111 25677777753210 111
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCC-CC-C-------------CCeEEecc--Cc
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GA-D-------------IPTYVVGV--NE 224 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk-~~-D-------------iP~iV~GV--N~ 224 (329)
.. .+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. ++ + .|..|++| |.
T Consensus 71 ~~-~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 EP-TEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp EE-CCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred cc-CCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 11 1222 254 899999999999999999999 99987666677753 32 2 26777777 99
Q ss_pred cccCCCCCceEEcCCchhhhhhhHHHhhhhhcCce-EEEEEEEeeccCC-CCCCC-CCcchhhhhccccccCC
Q 020217 225 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV-KGAMTTTHSYTGD-QALGC-FTQGLEESESCSVEHCP 294 (329)
Q Consensus 225 ~~~~~~~~~IISnASCTTn~LaPvlKvL~d~fGI~-~g~vTTvHa~T~d-Q~l~D-~~~d~~r~r~a~~~i~p 294 (329)
+.|.. .+||+||+|+|+|+++.|++|+++++|+ ++.|+|+|++|++ |+..| .+.+.++.+..+.+++|
T Consensus 145 ~~i~~--~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~ 215 (352)
T 2nqt_A 145 DQLRG--TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAG 215 (352)
T ss_dssp HHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTT
T ss_pred HHHhc--CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccccHHHHhhhcccccCCC
Confidence 99984 5899999999999999999999999999 9999999999999 88888 88888888888888887
No 42
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.86 E-value=3.6e-22 Score=195.91 Aligned_cols=187 Identities=21% Similarity=0.259 Sum_probs=127.2
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe-CC--CChhhhhhhccccccccccCceEEEecCCeEEECCeEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN-DS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn-d~--~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~ 160 (329)
+++||||.| +|.+|+.++|+|.++ +.++++.+- .. .+-. +... | +|.. +..|..+++.+.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~h--p~~el~~l~aS~~saGk~-~~~~------~-~~~~------~~~~p~~~~~~~ 81 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKH--PEFEIHALGASSRSAGKK-YKDA------A-SWKQ------TETLPETEQDIV 81 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTTTSB-HHHH------C-CCCC------SSCCCHHHHTCB
T ss_pred CccEEEEECCCChHHHHHHHHHHcC--CCceEEEeeccccccCCC-HHHh------c-cccc------ccccccccccce
Confidence 457999999 999999999999887 457876663 21 1111 1111 1 1110 000000001122
Q ss_pred EEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEeccCccccC-----------
Q 020217 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYD----------- 228 (329)
Q Consensus 161 V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP-sk~~DiP~iV~GVN~~~~~----------- 228 (329)
+ ++-++++ +|. ++|+||+|+|.+.+++.++.++++|++.|.+|++ .+++|+|++|++||.+.|.
T Consensus 82 v-~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~ 157 (381)
T 3hsk_A 82 V-QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVS 157 (381)
T ss_dssp C-EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHH
T ss_pred E-EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcc
Confidence 2 1123321 354 8999999999999999999999999976656665 3566889999999999875
Q ss_pred ---CCCCceEEcCCchhhhhhhHHHhhhhhcC-ceEEEEEEEeeccCCCCCCCCCcchhhhhccccccCCCc
Q 020217 229 ---HEVANIVSNASCTTNCLAPFVKVMDEELG-IVKGAMTTTHSYTGDQALGCFTQGLEESESCSVEHCPNE 296 (329)
Q Consensus 229 ---~~~~~IISnASCTTn~LaPvlKvL~d~fG-I~~g~vTTvHa~T~dQ~l~D~~~d~~r~r~a~~~i~p~~ 296 (329)
-.+.+||+||+|+|+|+++.|++|+++|| |+++.|+|+|+|||+|+..... .+..+.|++|-.
T Consensus 158 ~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~~-----~~~~~~N~~Py~ 224 (381)
T 3hsk_A 158 KGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGVS-----GMDILDNIVPYI 224 (381)
T ss_dssp TTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------CC-----HHHHTTCCBCCC
T ss_pred cccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCcc-----hhhhhcChhhcc
Confidence 12257999999999999999999999999 9999999999999999832210 125677888754
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.84 E-value=4.4e-22 Score=192.37 Aligned_cols=175 Identities=16% Similarity=0.174 Sum_probs=123.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
+||+|.| +|.+|+.++|.|.++ ++++++.+-...+.+.... ++...|..|.+.. .+.+....
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~--p~~el~~l~s~~~~~saGk--~~~~~~p~~~~~~-------------~~~v~~~~ 67 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRH--PHMNITALTVSAQSNDAGK--LISDLHPQLKGIV-------------ELPLQPMS 67 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC--TTEEEEEEEEETTCTTTTS--BHHHHCGGGTTTC-------------CCBEEEES
T ss_pred eEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEecCchhhcCC--chHHhCccccCcc-------------ceeEeccC
Confidence 7999999 999999999999886 4578776633210000000 0111222232110 11221100
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-C-CCCCC---------------eEEecc---Ccc
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-K-GADIP---------------TYVVGV---NEK 225 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs-k-~~DiP---------------~iV~GV---N~~ 225 (329)
++++ |. .++|+||+|+|.+.+++.++.|+++|++.|.+|++. . ++|+| .+|||+ |.+
T Consensus 68 ~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~ 144 (337)
T 3dr3_A 68 DISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGN 144 (337)
T ss_dssp SGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCH
T ss_pred CHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHH
Confidence 3333 31 289999999999999999999999999776667764 3 33332 456666 999
Q ss_pred ccCCCCCceEEcCCchhhhhhhHHHhhhh--hcCceEE-EEEEEeeccCCC-CCCC-CCcchh
Q 020217 226 DYDHEVANIVSNASCTTNCLAPFVKVMDE--ELGIVKG-AMTTTHSYTGDQ-ALGC-FTQGLE 283 (329)
Q Consensus 226 ~~~~~~~~IISnASCTTn~LaPvlKvL~d--~fGI~~g-~vTTvHa~T~dQ-~l~D-~~~d~~ 283 (329)
.+.. .+|||||+|+|+|++++|++|++ .||++++ .|+|+|+|||+| +++| .+.+.+
T Consensus 145 ~i~~--~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~~~~~ 205 (337)
T 3dr3_A 145 KLKE--ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV 205 (337)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTSGGGC
T ss_pred HhCC--CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccccccc
Confidence 9975 58999999999999999999999 6999999 999999999996 5778 777654
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.66 E-value=3.3e-17 Score=159.34 Aligned_cols=161 Identities=12% Similarity=0.084 Sum_probs=121.4
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.++||||.| +|.+|+.++|+|.++ +.++++.+......- -+|+.+|..|. +.+.+ .
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~h--P~~el~~l~S~~~aG-----~~~~~~~p~~~---------------~~l~~-~ 68 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNH--PEAKITYLSSRTYAG-----KKLEEIFPSTL---------------ENSIL-S 68 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHC--TTEEEEEEECSTTTT-----SBHHHHCGGGC---------------CCCBC-B
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEeCccccc-----CChHHhChhhc---------------cCceE-E
Confidence 468999999 999999999999988 468988887531110 12445555443 11122 1
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCC-C-----------C------CeEEecc
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGA-D-----------I------PTYVVGV 222 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs---k~~-D-----------i------P~iV~GV 222 (329)
+.+++++ |. ++|+||+|+|...+++.++.+ +|+ +||+.++ .++ | + |..++++
T Consensus 69 ~~~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~ 141 (351)
T 1vkn_A 69 EFDPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPEL 141 (351)
T ss_dssp CCCHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHH
T ss_pred eCCHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCcc
Confidence 1223322 23 799999999999999999887 788 6887664 332 3 2 5666677
Q ss_pred CccccCCCCCceEEcCCchhhhhhhHHHhhhhhcCce--EEEEEEEeeccCCCC-CCC
Q 020217 223 NEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQA-LGC 277 (329)
Q Consensus 223 N~~~~~~~~~~IISnASCTTn~LaPvlKvL~d~fGI~--~g~vTTvHa~T~dQ~-l~D 277 (329)
|.+.+.. .+||+||+|+|+++.+.|+||+++++|+ ++.|+|++++|+.++ ..+
T Consensus 142 n~e~i~~--a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~ 197 (351)
T 1vkn_A 142 HREEIKN--AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKV 197 (351)
T ss_dssp HHHHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSG
T ss_pred CHHHhcc--CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCccccc
Confidence 9999975 4899999999999999999999999999 999999999999999 555
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.80 E-value=5.4e-05 Score=71.86 Aligned_cols=151 Identities=21% Similarity=0.175 Sum_probs=93.9
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhh-hhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~-~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+.+++.|.++ .+.+++++|-|. +++. ...+. ..+|. ... .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~-~~~~elvav~d~-~~~~~~~~~a---~~~g~---~~~-----------------~ 57 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRN-AKYLEMGAMVGI-DAASDGLARA---QRMGV---TTT-----------------Y 57 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-CSSEEEEEEECS-CTTCHHHHHH---HHTTC---CEE-----------------S
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhh-CcCeEEEEEEeC-ChhhhHHHHH---HHcCC---Ccc-----------------c
Confidence 358999999999999999998662 246899999886 3222 11111 11111 000 0
Q ss_pred cCCCCC----CCCccCCCcEEEcCCCCCCChhhHHHHHHc--CCCEEEEe-CCCCCCCCCeEEeccCccccCCC-CCceE
Q 020217 164 NRDPLQ----LPWAELGIDIVIEGTGVFVDGPGAGKHIQA--GAKKVIIT-APAKGADIPTYVVGVNEKDYDHE-VANIV 235 (329)
Q Consensus 164 ~~~P~~----idW~~~GiDiVvesTG~f~~~e~a~~Hl~a--GakkVIIS-APsk~~DiP~iV~GVN~~~~~~~-~~~II 235 (329)
.+.++ .+| .++|+|+++||.....+.+...+++ |. .||+ .|.. -.|..++.+|.+.+... ..+++
T Consensus 58 -~~~e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~--~g~~~~p~v~~~~~~~~~~~~lv 130 (312)
T 1nvm_B 58 -AGVEGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAA--IGPYCVPVVNLEEHLGKLNVNMV 130 (312)
T ss_dssp -SHHHHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTC--SSCBCCHHHHTTTTTTCSEEECC
T ss_pred -CCHHHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCccc--ccccccCccCHHHHHhccCCcEE
Confidence 11111 112 2789999999988888888888998 87 4454 3321 12666677787765321 02466
Q ss_pred EcCCchhhhhhhHHHhhhhhcCceEE-EEEEEeecc
Q 020217 236 SNASCTTNCLAPFVKVMDEELGIVKG-AMTTTHSYT 270 (329)
Q Consensus 236 SnASCTTn~LaPvlKvL~d~fGI~~g-~vTTvHa~T 270 (329)
+++.|. ..|++..+...|..... .+.++.+.+
T Consensus 131 a~~g~~---~ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 131 TCGGQA---TIPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp CHHHHH---HHHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred EeCCcc---cchHHHHhhhhccchhHhHhhhhhccc
Confidence 666664 46888888888876543 556676655
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.52 E-value=0.0001 Score=69.60 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=61.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+++||+|+|+|+||+.+++.|.+. +++++|++-|....+.+ . + | +.+ .
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~--~~~elvav~d~~~~~~~----~-------~---------------g--v~~--~ 49 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQ--PDMDLVGIFSRRATLDT----K-------T---------------P--VFD--V 49 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEEESSSCCSS----S-------S---------------C--EEE--G
T ss_pred CCCEEEEEeecHHHHHHHHHHhcC--CCCEEEEEEcCCHHHhh----c-------C---------------C--Cce--e
Confidence 357999999999999999998754 46899988775211100 0 0 1 112 1
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++- .++|+||++|+.....+.+...+++|. .||++.|
T Consensus 50 ~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp 90 (320)
T 1f06_A 50 ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYD 90 (320)
T ss_dssp GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCC
T ss_pred CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCC
Confidence 2333332 278999999999888888888999885 5666655
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.22 E-value=0.00034 Score=65.47 Aligned_cols=87 Identities=20% Similarity=0.213 Sum_probs=57.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
++||||+|+|+||+.+++.+... +++++++|-|. +.+.+.. +|. ....+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~--~~~elvav~d~-~~~~~~~-------~g~------------------~~~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRR-NPAEVPF-------ELQ------------------PFRVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC---------------CCT------------------TSCEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHH-------cCC------------------CcCCH--H
Confidence 58999999999999999998764 46899988775 3222110 110 00000 1
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIIS 207 (329)
+..+. .++|+|+.||+.....+.+...+++|. .||..
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~e 95 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADS 95 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEEC
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEEC
Confidence 22222 278999999999988898889998886 44543
No 48
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.08 E-value=0.00056 Score=63.86 Aligned_cols=97 Identities=22% Similarity=0.218 Sum_probs=64.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||||+|+|.||+..++.|......++++++|-|. +.+....+. +|.- . +++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~~~~~-------~----------------~~~- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQKHDI-------P----------------KAY- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHHHHTC-------S----------------CEE-
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHHHcCC-------C----------------ccc-
Confidence 5689999999999999999886543335799999886 444433222 1211 0 000
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+..+|+|+-+|....-.+.+...+++| |.|++--|
T Consensus 56 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 -GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp -SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 111111 01226899999999998889999999999 56777666
No 49
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.96 E-value=0.0011 Score=61.67 Aligned_cols=94 Identities=21% Similarity=0.281 Sum_probs=63.8
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||+|+|.||+..++.|... +++++++|-|. +.+....+.+ +|... .
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~------~~~~~--~------------------ 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGN--ADARLVAVADA-FPAAAEAIAG------AYGCE--V------------------ 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH------HTTCE--E------------------
T ss_pred CceEEEEECCCHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHHHHH------HhCCC--c------------------
Confidence 568999999999999999998765 46899999886 4444332221 01000 0
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++++ ..+.++|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 111111 01226899999999998888888999998 56777555
No 50
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.91 E-value=0.0012 Score=62.14 Aligned_cols=96 Identities=24% Similarity=0.259 Sum_probs=61.9
Q ss_pred CeeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||||+|+|.||+ ..++++... +++++++|-|....+.++. +| |.+. + +++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~~~a~--~~----~~~~--~---------------~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR--ETLEVKTIFDLHVNEKAAA--PF----KEKG--V---------------NFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECTTCCHHHHH--HH----HTTT--C---------------EEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC--CCeEEEEEECCCHHHHHHH--hh----CCCC--C---------------eEE-
Confidence 568999999999998 567776543 5699999988631111110 11 1100 0 111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNEL-LTDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp -SCTHHH-HSCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 122222 11236899999999988889999999999 56777555
No 51
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.91 E-value=0.002 Score=60.23 Aligned_cols=95 Identities=22% Similarity=0.319 Sum_probs=64.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+++||||+|+|.||+.+++.|... +++++++|-|. +.+.+..+.+ +|. +. ++
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~------~~g--~~---------------~~-- 54 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN--PDLELVVIADP-FIEGAQRLAE------ANG--AE---------------AV-- 54 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH------TTT--CE---------------EE--
T ss_pred CceEEEEECCcHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH------HcC--Cc---------------ee--
Confidence 357999999999999999998765 46899999886 4443322211 111 01 11
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++++ ..+..+|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 97 (344)
T 3euw_A 55 ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKP 97 (344)
T ss_dssp SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECC
Confidence 112111 11237899999999998889899999999 45777666
No 52
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.89 E-value=0.00087 Score=62.82 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=63.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||+|+|.||+..++.|... +++++++|-|. +.+....+.+ .+|. . +++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~---~----------------~~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMI--DDAILYAISDV-REDRLREMKE---KLGV---E----------------KAY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGS--TTEEEEEEECS-CHHHHHHHHH---HHTC---S----------------EEE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HhCC---C----------------cee--
Confidence 468999999999999999988764 46899999886 4443322221 1110 0 010
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 111111 01127899999999988888888899999 56777666
No 53
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.87 E-value=0.0015 Score=61.15 Aligned_cols=98 Identities=21% Similarity=0.272 Sum_probs=64.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
|++||||+|+|.||+..++.+.++. +++++++|-|. +.+....+.+ .+|. .+ +++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~-~~~~l~av~d~-~~~~~~~~~~---~~g~---~~---------------~~~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKL-SGAEIVAVTDV-NQEAAQKVVE---QYQL---NA---------------TVY-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTC-SSEEEEEEECS-SHHHHHHHHH---HTTC---CC---------------EEE--
T ss_pred CeEEEEEECccHHHHHHHHHHHhhC-CCcEEEEEEcC-CHHHHHHHHH---HhCC---CC---------------eee--
Confidence 5689999999999999999987331 46899999886 4443322211 1110 00 111
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++++ ..+.++|+|+-+|......+.+...+++| |.|++--|
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 111111 01126899999999998889999999999 56777666
No 54
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.74 E-value=0.0033 Score=59.20 Aligned_cols=93 Identities=27% Similarity=0.385 Sum_probs=62.7
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+. .++++... +++++++|-|. +.+.... .|.+. +++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~--~~~~l~av~d~-~~~~~~~---------~~~~~----------------~~~- 56 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT--PGLELAGVSSS-DASKVHA---------DWPAI----------------PVV- 56 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHT---------TCSSC----------------CEE-
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHh---------hCCCC----------------ceE-
Confidence 4589999999999996 77877654 46899999886 4443320 11100 011
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 57 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 -SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp -SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 112221 11236899999999998889999999999 56777555
No 55
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.69 E-value=0.004 Score=59.79 Aligned_cols=88 Identities=24% Similarity=0.267 Sum_probs=57.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCC------CCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEE
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKD------SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~------~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I 159 (329)
++||||.|+|.||+.+++.+.+... .++++++|-|. +++.. .+ |. . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~-~~~~~---------~~-~~------~-~--------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR-DPRKP---------RA-IP------Q-E--------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS-CTTSC---------CS-SC------G-G---------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC-CHHHh---------hc-cC------c-c---------
Confidence 5899999999999999999876531 15788888775 21110 00 10 0 0
Q ss_pred EEEecCCCCCCCCccCCCcEEEcCCCCCC-ChhhHHHHHHcCCCEEEEeC
Q 020217 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFV-DGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 160 ~V~~~~~P~~idW~~~GiDiVvesTG~f~-~~e~a~~Hl~aGakkVIISA 208 (329)
.+ + .|++++- .+|+|+|+||... ..+.+.+.|++|. -|+++
T Consensus 56 ~~-~-~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 56 LL-R-AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp GE-E-SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred cc-c-CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 01 1 2455443 7899999999763 3456677888886 44553
No 56
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.68 E-value=0.0021 Score=49.47 Aligned_cols=97 Identities=25% Similarity=0.291 Sum_probs=57.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+.++|+|.|.|.||+.+++.|..+. ..+++++.. +.+.+..+.. .| +. + .....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r--~~~~~~~~~~----~~-----~~------~-------~~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADH--DLAALAVLNR----MG-----VA------T-------KQVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEES--CHHHHHHHHT----TT-----CE------E-------EECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeC--CHHHHHHHHh----CC-----Cc------E-------EEecC
Confidence 4468999999999999999998753 256666643 3333322211 00 00 0 00001
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIIS 207 (329)
.+++.+.-.-.++|+||.++|.......+...++.|++.+.++
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 1111111001278999999998877777777778899776554
No 57
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.68 E-value=0.0026 Score=60.35 Aligned_cols=99 Identities=26% Similarity=0.251 Sum_probs=64.3
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.+++||||+|+|.||+..++.|..+ .+++++++|-|. +.+.+..+.+ .+|. .+ +++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~---~~g~---~~---------------~~~- 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANT-VSGVEVVAVCDI-VAGRAQAALD---KYAI---EA---------------KDY- 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-CTTEEEEEEECS-STTHHHHHHH---HHTC---CC---------------EEE-
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhh-CCCcEEEEEEeC-CHHHHHHHHH---HhCC---CC---------------eee-
Confidence 3568999999999999999998733 246899999886 3333322211 1110 00 111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+..+|+|+-+|+.....+.+...+++| |.|++--|
T Consensus 77 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 -NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 111111 01226899999999999999999999999 56777666
No 58
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.65 E-value=0.00031 Score=66.61 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=58.4
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||+|+| +|++||.+++++.+. +++++|++-|..+.++.. .|. |.+.|. +. .| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~~~~~~~G----~d~--gel~G~----~~-----~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVRKGSSFVD----KDA--SILIGS----DF-----LG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCCTTCTTTT----SBG--GGGTTC----SC-----CS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCCccccc----cch--HHhhcc----Cc-----CC--ceee-
Confidence 568999999 999999999998765 579999997752211110 111 111110 00 01 1121
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
.+++++- .++|+|||.|......+.+...++.|.. |||
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2333321 1689999998766666777777888874 445
No 59
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.64 E-value=0.0031 Score=59.70 Aligned_cols=93 Identities=22% Similarity=0.257 Sum_probs=62.5
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+. .++++... +++++++|-|. +.+..+. +| .+ + +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~-------~~-~---------------~~~- 54 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVL--DEYQISKIMTS-RTEEVKR--DF-------PD-A---------------EVV- 54 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECS-CHHHHHH--HC-------TT-S---------------EEE-
T ss_pred CcceEEEEccCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--hC-------CC-C---------------ceE-
Confidence 3589999999999996 67776543 46999999887 4443221 11 10 0 111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 -HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp -SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 122222 11237899999999999899999999999 56777555
No 60
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.63 E-value=0.0044 Score=59.26 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=30.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC----CCCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR----KDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r----~~~~l~vVaInd~ 121 (329)
+++||+|.|+|.||+.+++.|.++ ...++++++|-|.
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 358999999999999999999763 1246999999886
No 61
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.63 E-value=0.0044 Score=58.62 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=62.3
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+. .++.+... +++++++|-|. +.+..+ .+|.+. +++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~---------~~~~~~----------------~~~- 54 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTN--PHFELYKIVER-SKELSK---------ERYPQA----------------SIV- 54 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHC--TTEEEEEEECS-SCCGGG---------TTCTTS----------------EEE-
T ss_pred CceEEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHH---------HhCCCC----------------ceE-
Confidence 4589999999999996 77877654 46999999886 333321 111100 111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+...-.+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (362)
T 3fhl_A 55 -RSFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKP 97 (362)
T ss_dssp -SCSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 122222 11236899999999998889999999999 46777555
No 62
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.61 E-value=0.0048 Score=57.19 Aligned_cols=94 Identities=19% Similarity=0.281 Sum_probs=61.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
++||||+|+|.||+.+++.|... +.+++++|-|. +.+....+. ..+|. . .++ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~~~~v~d~-~~~~~~~~~---~~~~~----~---------------~~~--~ 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS--GEYQLVAIYSR-KLETAATFA---SRYQN----I---------------QLF--D 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TSEEEEEEECS-SHHHHHHHG---GGSSS----C---------------EEE--S
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHH---HHcCC----C---------------eEe--C
Confidence 37999999999999999998764 35899999886 444332221 11110 0 111 1
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+++++- +.++|+|+.+|+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 222221 2378999999998888888888888884 5666545
No 63
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.60 E-value=0.003 Score=58.38 Aligned_cols=93 Identities=22% Similarity=0.271 Sum_probs=62.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+++||||+|+|.||+.+++.|.+. +++++++|-|. +.+....+. .. +.++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~--~~~~~v~v~d~-~~~~~~~~~-----------------~~--------~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASS-NPDNLALVP-----------------PG--------CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEES-CHHHHTTCC-----------------TT--------CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHH-----------------hh--------Cccc--
Confidence 458999999999999999998765 35899988876 333322111 11 1121
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++++ ..+.++|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 59 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP 101 (315)
T 3c1a_A 59 SDWRSV-VSAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKP 101 (315)
T ss_dssp SSTHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCC
Confidence 222222 11237899999999988888888889998 45666555
No 64
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.60 E-value=0.0038 Score=58.66 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=63.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+..++.+... +++++++|-|. +.+....+. +|.- . . +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~~~g~-------~-----------------~-~ 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS--EKLKLVTCYSR-TEDKREKFGKRYNC-------A-----------------G-D 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEECS-SHHHHHHHHHHHTC-------C-----------------C-C
T ss_pred CcceEEEEccCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHHHcCC-------C-----------------C-c
Confidence 468999999999999999988654 46899999886 444433222 1110 0 0 0
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++++ ..+.++|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 56 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 -ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp -SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 111111 01236899999999998888888999998 45777666
No 65
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.58 E-value=0.0019 Score=59.42 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=28.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
++||+|+|+|++|+.+++++.++ ++ ++|++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GH-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TC-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CC-EEEEEEec
Confidence 37999999999999999999876 35 88887765
No 66
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.57 E-value=0.0025 Score=59.30 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=61.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHH-hCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~-~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+..++.|. .. +.+++|+|-|. +.+.+..+.+ .+|. . .++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~--~~~~~vav~d~-~~~~~~~~a~---~~g~---~----------------~~~- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKI--QGVKLVAACAL-DSNQLEWAKN---ELGV---E----------------TTY- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTC--SSEEEEEEECS-CHHHHHHHHH---TTCC---S----------------EEE-
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcC--CCcEEEEEecC-CHHHHHHHHH---HhCC---C----------------ccc-
Confidence 4589999999999999999887 43 45899999886 4433322211 1110 0 011
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|+.....+.+...+++| |.|++-.|
T Consensus 61 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp 103 (346)
T 3cea_A 61 -TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKP 103 (346)
T ss_dssp -SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCC
Confidence 111111 01126899999999988888888889998 45666444
No 67
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.57 E-value=0.006 Score=57.80 Aligned_cols=93 Identities=22% Similarity=0.204 Sum_probs=63.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
++||||+|+|.||+..++.|... +++++++|-|. +.+.+...-+|+- . ++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~a~~~g~---------~---------------~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA--DNLEVHGVFDI-LAEKREAAAQKGL---------K---------------IY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECS-SHHHHHHHHTTTC---------C---------------BC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHhcCC---------c---------------ee--C
Confidence 58999999999999999988654 46899999886 4444321111110 0 00 1
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+.+++ ..+.++|+|+-+|+...-.+.+...+++| |.|++--|
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 11111 11237899999999998889999999999 56777655
No 68
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.57 E-value=0.0021 Score=60.10 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=63.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+.+++.|.+. +++++++|-|. +.+....+. +|.-. . + +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~~~~~~--------~---------------~-~ 56 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES--AQAEVRGIASR-RLENAQKMAKELAIP--------V---------------A-Y 56 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS--SSEEEEEEBCS-SSHHHHHHHHHTTCC--------C---------------C-B
T ss_pred CeEEEEEECchHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHcCCC--------c---------------e-e
Confidence 458999999999999999999765 46899999886 333332222 12110 0 0 0
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|......+.+...+++| |.|++--|
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 99 (330)
T 3e9m_A 57 -GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKP 99 (330)
T ss_dssp -SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 01226899999999998888888999998 45777655
No 69
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.57 E-value=0.0028 Score=59.44 Aligned_cols=96 Identities=18% Similarity=0.204 Sum_probs=59.6
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||||+|+|.||+. .++.++.. .+++++++|-|. +.+... .+ ..|.+. +++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~-~~~~~l~av~d~-~~~~~~-~~------~~~~~~----------------~~~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNR-KDSWHVAHIFRR-HAKPEE-QA------PIYSHI----------------HFT- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTC-TTTEEEEEEECS-SCCGGG-GS------GGGTTC----------------EEE-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhc-CCCeEEEEEEcC-CHhHHH-HH------HhcCCC----------------ceE-
Confidence 4689999999999985 56633332 256999999886 222221 11 011100 111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 222222 11236899999999998888899999999 56666555
No 70
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.48 E-value=0.0042 Score=58.99 Aligned_cols=93 Identities=18% Similarity=0.330 Sum_probs=61.4
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+. .++++... +++++++|-|. +.+.+.. + |.+. +++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~-------~~~~----------------~~~- 56 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSV--PGLNLAFVASR-DEEKVKR--D-------LPDV----------------TVI- 56 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHH--H-------CTTS----------------EEE-
T ss_pred CcceEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--h-------CCCC----------------cEE-
Confidence 4589999999999996 77777654 46899999887 4443321 1 1110 111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+..+|+|+.+|+.....+.+...+++| |.|++--|
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 57 -ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp -SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 112111 01237899999999998889999999999 45666555
No 71
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.47 E-value=0.0034 Score=59.21 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=62.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+++||||+|+|.||+.+++.|... +++++++|-|. +.+....+.+ .+|... .+ +++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~--~~~~lv~v~d~-~~~~~~~~a~---~~~~~~-~~---------------~~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA--PNATISGVASR-SLEKAKAFAT---ANNYPE-ST---------------KIH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTCCT-TC---------------EEE--
T ss_pred CceEEEEECchHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCCCC-CC---------------eee--
Confidence 458999999999999999988764 45899999886 4443322211 111000 00 111
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|+.....+.+...+++|. .|++--|
T Consensus 61 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 61 GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 111111 012268999999998888888888888884 5666444
No 72
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.46 E-value=0.008 Score=56.46 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=64.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+++||||+|+|.||+..++.+.... +++++++|-|. +.+.+..+.+ .+| ++++
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~~---~~~--------------------~~~~-- 64 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAVE---RTG--------------------ARGH-- 64 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HHC--------------------CEEE--
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHHH---HcC--------------------Ccee--
Confidence 4689999999999999999987652 46899999886 4444332221 011 0111
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++++ ..+.++|+|+-+|......+.+...+++| |.|++--|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 122221 11237899999999998888888999998 56776555
No 73
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.44 E-value=0.0036 Score=55.80 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=76.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
+||||+|+|+||+.+++.|.. +++++++|-|... .. .. + + .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~---~g~~lv~v~d~~~--~~---------------------~~----------~-~-~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER---NGFEIAAILDVRG--EH---------------------EK----------M-V-RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEEECSSC--CC---------------------TT----------E-E-SS
T ss_pred CEEEEECCCHHHHHHHHHHhc---CCCEEEEEEecCc--ch---------------------hh----------h-c-CC
Confidence 489999999999999998874 3578887766410 00 01 1 1 23
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn~La 246 (329)
++++-- .++|+|+++|+.....+.+...+++|. .||+..|... +.+-....+- +........++-.+.+... .
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~-~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~ 115 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAF-ADRDFLSRVR-EVCRKTGRRVYIASGAIGG--L 115 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGG-GSHHHHHHHH-HHHHHHCCCEEECCTTCSC--H
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccC-ChHHHHHHHH-HHHHhcCCeEEecCccccC--h
Confidence 333211 378999999998877788888889887 2344333210 1110000110 0011100222222222221 2
Q ss_pred hHHHhhhhhcCceEEEEEEEeec
Q 020217 247 PFVKVMDEELGIVKGAMTTTHSY 269 (329)
Q Consensus 247 PvlKvL~d~fGI~~g~vTTvHa~ 269 (329)
+.++.... |+++..++++|+.
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 116 DAIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHHhhc--cccEEEEEEEcCh
Confidence 34444443 8999999999876
No 74
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.42 E-value=0.0041 Score=57.94 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=61.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+++||||+|+|.||+.+++.|... +++++++|-|. +.+....+. . +|... +++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~--~~~~~~av~d~-~~~~~~~~a---~---~~~~~----------------~~~-- 56 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA--GNGEVVAVSSR-TLESAQAFA---N---KYHLP----------------KAY-- 56 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH--CSEEEEEEECS-CSSTTCC---------CCCCS----------------CEE--
T ss_pred CceEEEEEechHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHH---H---HcCCC----------------ccc--
Confidence 357999999999999999988754 45899999876 222221111 0 01000 011
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 99 (329)
T 3evn_A 57 DKLEDM-LADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKP 99 (329)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccC
Confidence 122221 01236899999999998888888999998 45777655
No 75
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.41 E-value=0.0055 Score=56.62 Aligned_cols=92 Identities=16% Similarity=0.168 Sum_probs=59.3
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||||+|+|.||+. +++.|... +++++++|-|. +.+....+.+ .+|. .+ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~---~~g~--------------------~~--~ 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAA--SDWTLQGAWSP-TRAKALPICE---SWRI--------------------PY--A 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSC--SSEEEEEEECS-SCTTHHHHHH---HHTC--------------------CB--C
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC--------------------Cc--c
Confidence 479999999999996 88888654 45899988886 2222211111 0110 00 0
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+++.+ +.++|+|+.+|+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122222 2368999999998877788888888885 4666545
No 76
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.39 E-value=0.0041 Score=57.28 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=27.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+||+|+| +|++|+.+++.+.+. ++++++++-|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~--~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA--DDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC--TTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEcc
Confidence 4899999 699999999998765 35899988765
No 77
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.39 E-value=0.0046 Score=58.44 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=63.1
Q ss_pred CeeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+ .+++.|.+. +++++++|-|. +.+....+.+ +|.. ..+
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~------~~g~-----------------~~~- 78 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAE--PLTEVTAIASR-RWDRAKRFTE------RFGG-----------------EPV- 78 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC--TTEEEEEEEES-SHHHHHHHHH------HHCS-----------------EEE-
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhC--CCeEEEEEEcC-CHHHHHHHHH------HcCC-----------------CCc-
Confidence 358999999999998 688988764 46899999886 4443332211 0110 011
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|......+.+...+++|. .|++--|
T Consensus 79 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 -EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp -ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 112111 112368999999999998899999999984 4677555
No 78
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.38 E-value=0.0036 Score=58.54 Aligned_cols=96 Identities=22% Similarity=0.268 Sum_probs=57.0
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||+|+| +|++||.+++.+.+. +++++|++-|....++.. .|. |.+.|. .. | +.+ .
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~~d~~~~~~~G----~d~--gel~g~----~~------g--v~v--~ 64 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--PDATLVGALDRTGSPQLG----QDA--GAFLGK----QT------G--VAL--T 64 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEEBCCTTCTTTT----SBT--TTTTTC----CC------S--CBC--B
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEEecCccccc----ccH--HHHhCC----CC------C--cee--c
Confidence 48999999 999999999999875 569999986642111100 010 111100 00 1 111 1
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIIS 207 (329)
.+.+++- .++|+|||.|......+.+...+++|.+ ||+.
T Consensus 65 ~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVig 103 (272)
T 4f3y_A 65 DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVIG 103 (272)
T ss_dssp CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEEC
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEE
Confidence 2222211 1579999998776666777777888874 4553
No 79
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.36 E-value=0.0066 Score=60.75 Aligned_cols=110 Identities=17% Similarity=0.302 Sum_probs=62.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhcccccccc-ccCceEEEecC-CeEE---ECCeEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLG-TFKADVKIVDN-ETIS---VDGKLI 159 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG-~F~g~V~v~~~-~~L~---inGk~I 159 (329)
+++||||+|+|+||+.+++.+... +++++++|-|. +++.....++ ..+| +++ +...++ ..+. -.|. +
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~--~~veLvAV~D~-~~era~~~a~--~~yG~~~~--~~~~~~~~~i~~a~~~g~-~ 93 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARM--QGIEVGALSAR-RLPNTFKAIR--TAYGDEEN--AREATTESAMTRAIEAGK-I 93 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTS--SSEEEEEEECS-STHHHHHHHH--HHHSSSTT--EEECSSHHHHHHHHHTTC-E
T ss_pred CceEEEEECChHHHHHHHHHHhhC--CCcEEEEEEeC-CHHHHHHHHH--HhcCCccc--cccccchhhhhhhhccCC-c
Confidence 568999999999999999887643 57999999997 4444433321 0012 111 110000 0000 0011 1
Q ss_pred EEEecCCCCCCCCccCCCcEEEcCCCCC-CChhhHHHHHHcCCCEEEEe
Q 020217 160 KVVSNRDPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGAKKVIIT 207 (329)
Q Consensus 160 ~V~~~~~P~~idW~~~GiDiVvesTG~f-~~~e~a~~Hl~aGakkVIIS 207 (329)
.++ .|.+++ ..+.++|+|+++||.. ...+.+...+++|. -|++
T Consensus 94 ~v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK--HVv~ 137 (446)
T 3upl_A 94 AVT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK--HLVM 137 (446)
T ss_dssp EEE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC--EEEE
T ss_pred eEE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC--cEEe
Confidence 222 222222 1233799999999863 44577778888886 4444
No 80
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.34 E-value=0.0042 Score=57.96 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=63.1
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
.++||||+|+|.||+. +++++... ++++|++|-|+ +.+....+. +|.- . +++
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~--~~~~lvav~d~-~~~~a~~~a~~~g~-------~----------------~~y 75 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDA--ENCVVTAIASR-DLTRAREMADRFSV-------P----------------HAF 75 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC--SSEEEEEEECS-SHHHHHHHHHHHTC-------S----------------EEE
T ss_pred CccEEEEEcChHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHHHcCC-------C----------------eee
Confidence 3589999999999986 56777654 46999999997 555443322 1211 0 011
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+..+|+|+=+|....-.+.+...|++|. -|++--|
T Consensus 76 --~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 --GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp --SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 111111 112378999999999998899999999984 5677555
No 81
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.32 E-value=0.0077 Score=55.36 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=61.9
Q ss_pred CeeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhcc-ccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLk-yDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
+++||||+|+|.||+. +++.|... +++++++|-|. +.+.+..+.+ |.-. .
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~~~~~------------------------~- 56 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKS--ERFEFVGAFTP-NKVKREKICSDYRIM------------------------P- 56 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSC--SSSEEEEEECS-CHHHHHHHHHHHTCC------------------------B-
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHHHcCCC------------------------C-
Confidence 3579999999999996 88887653 46899999886 4444332221 1110 0
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+ .+.+++ -+ ++|+|+-+|+.....+.+...+++|. .|++--|
T Consensus 57 ~-~~~~~l--l~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (308)
T 3uuw_A 57 F-DSIESL--AK-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKP 98 (308)
T ss_dssp C-SCHHHH--HT-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred c-CCHHHH--Hh-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCC
Confidence 0 112111 01 68999999999988888889999985 4666555
No 82
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.26 E-value=0.0079 Score=55.76 Aligned_cols=94 Identities=19% Similarity=0.259 Sum_probs=59.1
Q ss_pred CeeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
|++||||+|+|.||+ .+++.|... ++++++ |-|. +.+.+..+.+ .+|. . .. .
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~--~~~~l~-v~d~-~~~~~~~~a~---~~g~---~----------------~~-~ 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQW--PDIELV-LCTR-NPKVLGTLAT---RYRV---S----------------AT-C 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTS--TTEEEE-EECS-CHHHHHHHHH---HTTC---C----------------CC-C
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhC--CCceEE-EEeC-CHHHHHHHHH---HcCC---C----------------cc-c
Confidence 458999999999998 488988653 358888 8776 4443322221 1110 0 00 0
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
....+.+ +.++|+|+.+|+...-.+.+...+++|. .|++--|
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 0112222 2378999999998888888888888885 3666544
No 83
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.16 E-value=0.0036 Score=58.35 Aligned_cols=78 Identities=18% Similarity=0.268 Sum_probs=54.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
.-+||+|.|||.||+.++|. + +++++++-+ ++. | .| |- .+ .
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~---~---~leLv~v~~----~k~----------g------------el---gv--~a--~ 51 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL---G---NFEKIYAYD----RIS----------K------------DI---PG--VV--R 51 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH---S---CCSEEEEEC----SSC----------C------------CC---SS--SE--E
T ss_pred ccceEEEECcCHHHHHHHhc---C---CcEEEEEEe----ccc----------c------------cc---Cc--ee--e
Confidence 34799999999999999997 2 588888743 111 1 11 21 11 1
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEE
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKV 204 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkV 204 (329)
.|.+++- + ..|+||||++..--.+...+.|++|..-|
T Consensus 52 ~d~d~ll--a-~pD~VVe~A~~~av~e~~~~iL~aG~dvv 88 (253)
T 1j5p_A 52 LDEFQVP--S-DVSTVVECASPEAVKEYSLQILKNPVNYI 88 (253)
T ss_dssp CSSCCCC--T-TCCEEEECSCHHHHHHHHHHHTTSSSEEE
T ss_pred CCHHHHh--h-CCCEEEECCCHHHHHHHHHHHHHCCCCEE
Confidence 4566665 2 78999999988866667888888998543
No 84
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.14 E-value=0.0035 Score=60.11 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=64.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCC------CCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGK 157 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~------~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk 157 (329)
+++||||+|+|.||+..++++.... ..+++||+|-|+ +.+.+..+. +|.- .
T Consensus 25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a~~~~~-------~-------------- 82 (412)
T 4gqa_A 25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHAAKLGA-------E-------------- 82 (412)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHHHHHTC-------S--------------
T ss_pred ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHHHHcCC-------C--------------
Confidence 4689999999999998888775321 124799999997 544443222 1211 0
Q ss_pred EEEEEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 158 LIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 158 ~I~V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+++ .+.+++ ..+.++|+|+-+|....-.+.+...|++| |-|++--|
T Consensus 83 --~~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 128 (412)
T 4gqa_A 83 --KAY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKP 128 (412)
T ss_dssp --EEE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred --eEE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecC
Confidence 011 111111 11236899999999999999999999999 46777665
No 85
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.13 E-value=0.0074 Score=57.17 Aligned_cols=95 Identities=16% Similarity=0.203 Sum_probs=62.6
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||||+|+|.||+. +++.|.+. +++++++|-|. +.+....+.+ +|.+. +++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~------~~~~~----------------~~~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQM--QDIRIVAACDS-DLERARRVHR------FISDI----------------PVL-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTC--TTEEEEEEECS-SHHHHGGGGG------TSCSC----------------CEE--
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHH------hcCCC----------------ccc--
Confidence 489999999999995 88988754 46899999887 4444332221 11100 011
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+...-.+.+...+++|. .|++--|
T Consensus 58 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 112111 012368999999998888888889999984 5777656
No 86
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.12 E-value=0.0072 Score=60.32 Aligned_cols=92 Identities=22% Similarity=0.283 Sum_probs=58.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-------CCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeE
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR-------KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL 158 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r-------~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~ 158 (329)
++||||.|+|.||+.+++.|.++ ...++++++|-+. +.+....++ + +.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~-~~~~~~~~~--~--------------~~-------- 64 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR-NLDKAEALA--G--------------GL-------- 64 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS-CHHHHHHHH--T--------------TC--------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC-CHHHhhhhc--c--------------cC--------
Confidence 58999999999999999887642 1246899999886 333221111 0 00
Q ss_pred EEEEecCCCCCCCCccCCCcEEEcCCCC-CCChhhHHHHHHcCCCEEEEeC
Q 020217 159 IKVVSNRDPLQLPWAELGIDIVIEGTGV-FVDGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 159 I~V~~~~~P~~idW~~~GiDiVvesTG~-f~~~e~a~~Hl~aGakkVIISA 208 (329)
.++ .|++++ ..+..+|+|+++||. ....+.....|++|. -|+++
T Consensus 65 -~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK--hVvte 109 (444)
T 3mtj_A 65 -PLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK--HVVTA 109 (444)
T ss_dssp -CEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC--EEEEC
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC--EEEEC
Confidence 010 122111 112378999999996 666677888999986 45554
No 87
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.12 E-value=0.011 Score=57.62 Aligned_cols=102 Identities=19% Similarity=0.191 Sum_probs=64.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhcc-ccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLk-yDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+..++.|... +.+++++|-|. +.+.+..+.+ +. .+|. . . .+++.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~--~~~~lvav~d~-~~~~~~~~a~~~~-~~g~-~-~---------------~~~~~ 77 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARR--DDVEIVAFADP-DPYMVGRAQEILK-KNGK-K-P---------------AKVFG 77 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-CHHHHHHHHHHHH-HTTC-C-C---------------CEEEC
T ss_pred CCceEEEEecCHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHHH-hcCC-C-C---------------Cceec
Confidence 458999999999999999988754 46999999987 4444332221 10 0110 0 0 01111
Q ss_pred --cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 --NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 --~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
..+.+++ ..+..+|+|+.+|+...-.+.+...+++|. .|++--|
T Consensus 78 ~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 78 NGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp SSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred cCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 0122221 112368999999999988888889999994 5666444
No 88
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.11 E-value=0.0037 Score=59.78 Aligned_cols=36 Identities=31% Similarity=0.509 Sum_probs=30.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC------CCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~------~~~l~vVaInd~ 121 (329)
++||||.|+|.||+.+++.+.+.. ..++++++|-|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 379999999999999999987641 146899999886
No 89
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.08 E-value=0.0052 Score=58.76 Aligned_cols=94 Identities=14% Similarity=0.172 Sum_probs=63.3
Q ss_pred CeeeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGfG-RIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
|++||||+|+| .+|+..++.+... +++++++|-|. +.+....+. +|+- . ++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~~g~-------~-----------------~~ 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH--PDAQIVAACDP-NEDVRERFGKEYGI-------P-----------------VF 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC--TTEEEEEEECS-CHHHHHHHHHHHTC-------C-----------------EE
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHHHcCC-------C-----------------eE
Confidence 46899999999 9999999988764 46899999987 444332221 1210 0 10
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+..+|+|+-+|......+.+...+++| |.|++--|
T Consensus 54 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 --ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred --CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 111111 11226899999999988888888999999 56777555
No 90
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.04 E-value=0.011 Score=56.19 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=29.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-----CCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~-----~~~l~vVaInd~ 121 (329)
++||||.|+|.||+.+++.+.+.. +.++++++|-|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999987532 114899999875
No 91
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.01 E-value=0.012 Score=57.50 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=62.8
Q ss_pred CeeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+ .+++.|.+. +++++|+|-|. +.+....+.+ .+|. . .. .+.+
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~a~---~~g~---~-----~~-------~~~~-- 138 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC--QHSRIEALVSG-NAEKAKIVAA---EYGV---D-----PR-------KIYD-- 138 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC--SSEEEEEEECS-CHHHHHHHHH---HTTC---C-----GG-------GEEC--
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCC---C-----cc-------cccc--
Confidence 458999999999997 788887653 45899999886 4433322211 1110 0 00 0111
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
..+.+++- .+.++|+|+.+|......+.+...+++|. .|++--|
T Consensus 139 ~~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 139 YSNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp SSSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred cCCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 12222221 12368999999999888888888999984 5666544
No 92
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.86 E-value=0.016 Score=53.99 Aligned_cols=98 Identities=20% Similarity=0.216 Sum_probs=61.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC-----CCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR-----KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r-----~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I 159 (329)
+|+||||+|+|+||+.-++++... ..+.++||+|-|+ +.+.+..+.+ +|...
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-~~~~a~~~a~------~~g~~---------------- 80 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-NAGLAEARAG------EFGFE---------------- 80 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---TTHHHHHH------HHTCS----------------
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-CHHHHHHHHH------HhCCC----------------
Confidence 468999999999999877765321 1246899999997 3333322221 11100
Q ss_pred EEEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 160 ~V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+++ .|.+++ ..+.++|+|+=+|....-.+.+...|++|. -|++--|
T Consensus 81 ~~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 81 KAT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp EEE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred eec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 010 111111 112368999999999999999999999985 4666445
No 93
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.82 E-value=0.0097 Score=55.92 Aligned_cols=87 Identities=22% Similarity=0.211 Sum_probs=60.6
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||||+|+|.||+ ..++++.+. +++++++|-|. +.+ ++ | ++++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~--~~~~lvav~d~-~~~-------------~~---------------g--~~~~-- 69 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN--ANFKLVATASR-HGT-------------VE---------------G--VNSY-- 69 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC--TTEEEEEEECS-SCC-------------CT---------------T--SEEE--
T ss_pred CceEEEEecCHHHHHHHHHHHHhC--CCeEEEEEEeC-Chh-------------hc---------------C--CCcc--
Confidence 58999999999999 789988765 46999999886 211 01 0 0111
Q ss_pred CCCCCCCCcc-CCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAE-LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~-~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+ .++|+|+-+|+...-.+.+...+++| |.|++--|
T Consensus 70 ~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 122221 011 26899999999988888999999999 56777555
No 94
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.79 E-value=0.017 Score=53.73 Aligned_cols=100 Identities=21% Similarity=0.265 Sum_probs=58.4
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||+|+|. |++|+.+++.+.+. +++++|++-|..+ +. +.-.|- |.+.+. .. .| +.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~--~~~elva~~d~~~-~~---~~g~d~--~~~~g~----~~-----~~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL--EGVQLGAALEREG-SS---LLGSDA--GELAGA----GK-----TG--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS--TTEECCCEECCTT-CT---TCSCCT--TCSSSS----SC-----CS--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCc-hh---hhhhhH--HHHcCC----Cc-----CC--ceec--
Confidence 479999996 99999999988765 3588887766411 00 000010 111110 00 01 2222
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs 210 (329)
.+.+++- .++|+|||.|......+.+...+++|.. ||+..|+
T Consensus 64 ~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTtG 105 (273)
T 1dih_A 64 SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTTG 105 (273)
T ss_dssp SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCCC
T ss_pred CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECCC
Confidence 3343321 1689999888776666777788888875 5564443
No 95
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.73 E-value=0.0075 Score=56.13 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=63.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCC-----CCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKL 158 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~-----~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~ 158 (329)
.++||||+|+|.||+.-++++...+ ....+|++|-|. +.+.+..+. +|.- .
T Consensus 5 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a~~~g~-------~--------------- 61 (390)
T 4h3v_A 5 TNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAAGKLGW-------S--------------- 61 (390)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHHHHHTC-------S---------------
T ss_pred CcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHHHHcCC-------C---------------
Confidence 3589999999999998888775421 012489999987 555443322 1211 0
Q ss_pred EEEEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 159 IKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 159 I~V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+++ .|.+++ ..+.++|+|+=+|....-.+.+...|++| |-|++--|
T Consensus 62 -~~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 107 (390)
T 4h3v_A 62 -TTE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKP 107 (390)
T ss_dssp -EEE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecC
Confidence 011 111111 11237899999999999999999999999 46777555
No 96
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.70 E-value=0.011 Score=55.38 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=64.3
Q ss_pred CeeeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGfG-RIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
+++||||+|+| .+|+..++.+... .+++++++|-|. +.+....+. +|.. . +++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~~~~~--------~---------------~~~ 71 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNL-SHLFEITAVTSR-TRSHAEEFAKMVGN--------P---------------AVF 71 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTT-TTTEEEEEEECS-SHHHHHHHHHHHSS--------C---------------EEE
T ss_pred CceeEEEEecCHHHHHHHHHHHHhC-CCceEEEEEEcC-CHHHHHHHHHHhCC--------C---------------ccc
Confidence 56899999999 8999999988654 146899999987 444443222 1210 0 111
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+..+|+|+.+|+...-.+.+...+++| |-|++--|
T Consensus 72 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 114 (340)
T 1zh8_A 72 --DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKP 114 (340)
T ss_dssp --SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11236899999999988889999999999 46777655
No 97
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.59 E-value=0.018 Score=51.79 Aligned_cols=95 Identities=21% Similarity=0.194 Sum_probs=61.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
..+|+|+|.|.+|+.+++.+... . .+++|++-|. +++.. |+ .++|.++ ....
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~-dp~k~----------g~-------------~i~gv~V--~~~~ 131 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDV-DPEKV----------GR-------------PVRGGVI--EHVD 131 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEES-CTTTT----------TC-------------EETTEEE--EEGG
T ss_pred CCEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeC-CHHHH----------hh-------------hhcCCee--ecHH
Confidence 36899999999999999863322 3 6889988764 22221 11 1334333 2223
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs 210 (329)
+.+++ ..+ ++|+|+-+++.....+-+...+++|++-++.-+|-
T Consensus 132 dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 132 LLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred hHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 33222 124 79999999998866677777788898776665664
No 98
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.46 E-value=0.02 Score=52.90 Aligned_cols=91 Identities=21% Similarity=0.231 Sum_probs=59.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~-~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+++||||+|+|.||+..++.+.... .+.+++++|.|... + ...+ | +. +
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~--a~~~------------------g--~~--~ 54 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------L--GSLD------------------E--VR--Q 54 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------C--CEET------------------T--EE--B
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------H--HHHc------------------C--CC--C
Confidence 4589999999999999988875410 24589999877510 0 0000 1 01 1
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+.+|+...-.+.+...|++|. .|++--|
T Consensus 55 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 -ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp -CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 122221 112378999999999888889999999985 5666555
No 99
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.36 E-value=0.029 Score=51.68 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=58.2
Q ss_pred eeEEEEcCChhHHHH-HHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAINGFGRIGRNF-LRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInGfGRIGR~v-lR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
+||||+|+|.||+.+ ++.|.+ +++++++|-|. +.+....+.+ .+|. . .+ + .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~---~~~~~vav~d~-~~~~~~~~~~---~~g~---~----------------~~-~-~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA---TGGEVVSMMST-SAERGAAYAT---ENGI---G----------------KS-V-T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH---TTCEEEEEECS-CHHHHHHHHH---HTTC---S----------------CC-B-S
T ss_pred CeEEEEcccHHHHHhhhHHhhc---CCCeEEEEECC-CHHHHHHHHH---HcCC---C----------------cc-c-C
Confidence 489999999999997 788765 35899999886 4443322211 1110 0 00 0 1
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+.+++ ..+.++|+|+.+|+.....+.+...+++|. .|++--|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCC
Confidence 11111 011268999999998887788888888883 5666444
No 100
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.62 E-value=0.0094 Score=55.71 Aligned_cols=96 Identities=11% Similarity=0.089 Sum_probs=60.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCC---hhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d---~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
|++||||+|+|.+|+..++.+ . +++++++|-|... .+..+..++ .+|. .. ++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~--~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~---------------~~ 55 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--D--EECSITGIAPGVPEEDLSKLEKAIS---EMNI---KP---------------KK 55 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--C--TTEEEEEEECSSTTCCCHHHHHHHH---TTTC---CC---------------EE
T ss_pred CceEEEEEccchhHHHHHHhc--C--CCcEEEEEecCCchhhHHHHHHHHH---HcCC---CC---------------cc
Confidence 568999999999999888876 2 4699999998621 222222211 0110 00 11
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+ .+.+++ ..+..+|+|+-+|....-.+.+...+++|. .|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 1 122221 112368999999999888888889999994 5777555
No 101
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.56 E-value=0.029 Score=50.86 Aligned_cols=98 Identities=19% Similarity=0.224 Sum_probs=61.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChh-hhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK-NASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~-~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
..+|+|+|.|.+|+.+++.+. ....++++|++=|. |++ .. |+ =.++|- .|..-
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~-~~~~g~~iVg~~D~-dp~~ki----------G~------------~~i~Gv--pV~~~ 137 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRF-HDRNKMQISMAFDL-DSNDLV----------GK------------TTEDGI--PVYGI 137 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCC-CTTSSEEEEEEEEC-TTSTTT----------TC------------BCTTCC--BEEEG
T ss_pred CCEEEEECcCHHHHHHHHhhh-cccCCeEEEEEEeC-Cchhcc----------Cc------------eeECCe--EEeCH
Confidence 368999999999999988642 22246898888664 332 21 11 002232 23222
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs 210 (329)
.+.+++ -.++++|+++-+++.....+-+..-.++|++.++-=+|-
T Consensus 138 ~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 138 STINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 222111 124589999999998766677777888999987666764
No 102
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=94.46 E-value=0.17 Score=47.08 Aligned_cols=94 Identities=17% Similarity=0.263 Sum_probs=61.9
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||||+|+ |.||+..++++.+. +.++|+|-|. +.+. +. .+.. |.+ + +++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~-~~~~-~~---~~~~---~~~-~---------------~~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDP-ATNV-GL---VDSF---FPE-A---------------EFF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECS-SCCC-GG---GGGT---CTT-C---------------EEE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcC-CHHH-HH---HHhh---CCC-C---------------cee--
Confidence 479999999 79999999998764 4799999987 2222 11 1111 110 0 111
Q ss_pred CCCCCCC-C------ccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLP-W------AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~id-W------~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++. + .+..+|+|+-+|....-.+.+...|++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECC
Confidence 1111110 0 2347899999999999999999999999 45776555
No 103
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=94.37 E-value=0.076 Score=49.29 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=58.1
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 86 ~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
++||||+|+|.+|. .+++.|.. +++++|+|-|. +.+....+. +|.. ++ + +
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---~~~~lvav~d~-~~~~~~~~a~~~~~--------~~---------------~-~ 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---AGAELAGVFES-DSDNRAKFTSLFPS--------VP---------------F-A 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---TTCEEEEEECS-CTTSCHHHHHHSTT--------CC---------------B-C
T ss_pred ccEEEEECCChHHHHHhhhhhcC---CCcEEEEEeCC-CHHHHHHHHHhcCC--------Cc---------------c-c
Confidence 58999999999996 56777643 35899999886 333222111 1210 00 0 0
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+...-.+.+...+++|. -|++--|
T Consensus 56 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 -ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp -SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 012268999999999888888888899884 4666555
No 104
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.32 E-value=0.063 Score=48.47 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=57.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
.+|+|+|.|.+|+.+++.+... ...+++|++-|. +++.. |+ .++|-++. ...+
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~-~~g~~iVg~~D~-dp~k~----------g~-------------~i~gv~V~--~~~d 138 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTK-NNNTKISMAFDI-NESKI----------GT-------------EVGGVPVY--NLDD 138 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC-------CCEEEEEES-CTTTT----------TC-------------EETTEEEE--EGGG
T ss_pred CEEEEEccCHHHHHHHHHHhcc-cCCcEEEEEEeC-CHHHH----------Hh-------------HhcCCeee--chhh
Confidence 6899999999999999942211 235889988774 32221 11 13443332 2233
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPs 210 (329)
.+++- .+ . |+|+.+++.....+-+...+++|.+.++.-+|-
T Consensus 139 l~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 139 LEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 32221 12 2 999999998766677777888999887777775
No 105
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.11 E-value=0.055 Score=51.30 Aligned_cols=93 Identities=14% Similarity=0.215 Sum_probs=60.4
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 86 ~vkVaInGfGRIGR-~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
++||||+|+|.+|. .++.++.. +++++++|-|. +.+....+. +|.. + +++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---~~~~lvav~d~-~~~~a~~~a~~~~~--------~---------------~~~- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---AGARLAGFHEK-DDALAAEFSAVYAD--------A---------------RRI- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---TTCEEEEEECS-CHHHHHHHHHHSSS--------C---------------CEE-
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---CCcEEEEEEcC-CHHHHHHHHHHcCC--------C---------------ccc-
Confidence 58999999999995 45666643 46899999997 444433222 1210 0 010
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++ ..+.++|+|+-+|+...-.+.+...|++| |-|++--|
T Consensus 78 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 120 (361)
T 3u3x_A 78 -ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKP 120 (361)
T ss_dssp -SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESC
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 11236899999999988888889999999 46777655
No 106
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=94.09 E-value=0.12 Score=48.32 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=62.2
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
++||||+|+ |.||+..++++.+. +.++++|-|+. .+. +. .+.. |.+ + +++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~-~~~-~~---~~~~---~~~-~---------------~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDIN-DSV-GI---IDSI---SPQ-S---------------EFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECSS-CCC-GG---GGGT---CTT-C---------------EEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcCC-HHH-HH---HHhh---CCC-C---------------cEE--
Confidence 479999999 79999999998764 47999999872 221 11 1111 110 0 111
Q ss_pred CCCCCCC--------CccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLP--------WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~id--------W~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++. ..+.++|+|+-+|....-.+.+...+++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 1111110 02347999999999999999999999999 45777555
No 107
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=94.03 E-value=0.049 Score=53.63 Aligned_cols=40 Identities=23% Similarity=0.337 Sum_probs=29.9
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEE-eCCCChhhhh
Q 020217 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVV-NDSGGVKNAS 128 (329)
Q Consensus 87 vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaI-nd~~d~~~~a 128 (329)
+||+|.|+ |.||+.+++.+.+.+ .+++++++ .+. +++.+.
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al~ag~-ni~~l~ 46 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNL-DRYQVIALTANR-NVKDLA 46 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEEEESS-CHHHHH
T ss_pred eEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEEEcCC-CHHHHH
Confidence 79999997 999999999987653 24898887 432 454443
No 108
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=93.68 E-value=0.081 Score=51.19 Aligned_cols=97 Identities=20% Similarity=0.142 Sum_probs=60.0
Q ss_pred CeeeEEEEcCCh---hHHHHHHHHHhCCCCCceEEE-EeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEE
Q 020217 85 AKLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLI 159 (329)
Q Consensus 85 ~~vkVaInGfGR---IGR~vlR~l~~r~~~~l~vVa-Ind~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I 159 (329)
+++||||+|+|+ ||+..++++... +.+++|+ |-|. +.+....+. +|.-..-+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~~~g~~~~~-------------------- 92 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD--DHYELVAGALSS-TPEKAEASGRELGLDPSR-------------------- 92 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT--SCEEEEEEECCS-SHHHHHHHHHHHTCCGGG--------------------
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC--CCcEEEEEEeCC-CHHHHHHHHHHcCCCccc--------------------
Confidence 358999999999 999988887654 4589996 8776 444433222 12110000
Q ss_pred EEEecCCCCCCCCcc-----CCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 160 KVVSNRDPLQLPWAE-----LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 160 ~V~~~~~P~~idW~~-----~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+ + .+.+++ ..+ .++|+|+-+|+...-.+.+...+++|. -|++--|
T Consensus 93 -~-~-~~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 93 -V-Y-SDFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp -B-C-SCHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred -c-c-CCHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 0 0 011111 001 258999999999988888889999884 5666555
No 109
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.38 E-value=0.39 Score=39.48 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|.|.|+|+||+.+++.|.... .+++++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG---HSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 358999999999999999998753 57777754
No 110
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=93.00 E-value=0.066 Score=53.18 Aligned_cols=100 Identities=10% Similarity=0.128 Sum_probs=64.8
Q ss_pred CeeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEE
Q 020217 85 AKLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (329)
Q Consensus 85 ~~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~ 160 (329)
+++||||+|+ |.+|+..++.|.... +++++|+|-|. +.+....+.+ .+|. . . ++
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~-~~~~lvav~d~-~~~~a~~~a~---~~g~-~--------~--------~~ 95 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLS-SQFQIVALYNP-TLKSSLQTIE---QLQL-K--------H--------AT 95 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTT-TTEEEEEEECS-CHHHHHHHHH---HTTC-T--------T--------CE
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC-C--------c--------ce
Confidence 3589999999 999999999987641 35899999986 4443322211 1110 0 0 01
Q ss_pred EEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCC-----CEEEEeCC
Q 020217 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (329)
Q Consensus 161 V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGa-----kkVIISAP 209 (329)
++ .+.+++ ..+..+|+|+-+|....-.+.+...|++|. |-|++--|
T Consensus 96 ~~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 96 GF--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp EE--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred ee--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 11 112111 012268999999999888888889999994 67888655
No 111
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.98 E-value=0.17 Score=44.77 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=26.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|++||.|-|.|.||+.+++.|.++. .+|+++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG---WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT---CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC---CEEEEEEc
Confidence 5679999999999999999998763 57777654
No 112
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=92.88 E-value=0.077 Score=50.15 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=27.2
Q ss_pred CCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 176 GIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 176 GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.+|+|+.+|+...-.+.+...|++| |.|++--|
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP 115 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQAINAG-KHVYCEKP 115 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCC
Confidence 6899999999999999999999999 45666444
No 113
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=92.75 E-value=0.044 Score=53.49 Aligned_cols=99 Identities=9% Similarity=0.080 Sum_probs=64.5
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
++||||+|+ |.+|+..++.|.... +++++|+|-|. +.+....+.+ .+|. . + +++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~g~-~--------~--------~~~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLS-SQFQITALYSP-KIETSIATIQ---RLKL-S--------N--------ATA 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HTTC-T--------T--------CEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC-C--------c--------cee
Confidence 489999999 999999999987641 35899999886 4443322211 1110 0 0 011
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCC-----CEEEEeCC
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGa-----kkVIISAP 209 (329)
+ .+.+++ ..+..+|+|+.+|+...-.+.+...+++|. |.|++--|
T Consensus 78 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 78 F--PTLESF-ASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp E--SSHHHH-HHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred e--CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 1 122221 112368999999999888888888999994 67877655
No 114
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=92.68 E-value=0.08 Score=50.64 Aligned_cols=102 Identities=18% Similarity=0.071 Sum_probs=60.9
Q ss_pred CeeeEEEEcCCh---hHHHHHHHHHhCCCCCceEEE-EeCCCChhhhhhhc-cccccccccCceEEEecCCeEEECCeEE
Q 020217 85 AKLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLI 159 (329)
Q Consensus 85 ~~vkVaInGfGR---IGR~vlR~l~~r~~~~l~vVa-Ind~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L~inGk~I 159 (329)
+++||||+|+|+ ||+..++++... +++++|+ |-|. +.+....+. +|.-..-++..+..
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~~~g~~~~~~~~~~~-------------- 73 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRD--NTFVLVAGAFDI-DPIRGSAFGEQLGVDSERCYADYL-------------- 73 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGG--GSEEEEEEECCS-SHHHHHHHHHHTTCCGGGBCSSHH--------------
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhC--CCeEEEEEEeCC-CHHHHHHHHHHhCCCcceeeCCHH--------------
Confidence 468999999999 999988887653 3589997 7776 444433222 12110000000000
Q ss_pred EEEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 160 ~V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
.++.. +.. .+.++|+|+-+|+...-.+.+...+++|. .|++--|
T Consensus 74 ~ll~~--~~~---~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 74 SMFEQ--EAR---RADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp HHHHH--HTT---CTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred HHHhc--ccc---cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 01000 000 00258999999999988899999999984 5666444
No 115
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.61 E-value=0.12 Score=49.90 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=30.8
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~-~~~l~vVaInd~ 121 (329)
+++||||.|+|.||+.+++.+.+.. ..++++++|-|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999999999999998753 225899999874
No 116
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.00 E-value=0.27 Score=41.98 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 3799999 9999999999998753 57766644
No 117
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=91.97 E-value=0.73 Score=38.23 Aligned_cols=85 Identities=25% Similarity=0.345 Sum_probs=55.4
Q ss_pred CeeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEE
Q 020217 85 AKLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (329)
Q Consensus 85 ~~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~ 160 (329)
.+.+|+|+|. |++|+.+++.|.+.. ++|+.+|-. + +. +.|. +
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G---~~V~~vnp~-----------~----------------~~--i~G~--~ 58 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKG---FEVLPVNPN-----------Y----------------DE--IEGL--K 58 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT-----------C----------------SE--ETTE--E
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCC---CEEEEeCCC-----------C----------------Ce--ECCe--e
Confidence 4578999999 999999999988753 477666532 0 01 1232 1
Q ss_pred EEecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 020217 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 161 V~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISA 208 (329)
++ .++++++- .+|+|+-++....-.+-+...+++|++.+++..
T Consensus 59 ~~--~s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 59 CY--RSVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp CB--SSGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred ec--CCHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 21 34455542 689999998865444555556678998887754
No 118
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.94 E-value=0.19 Score=40.79 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=30.0
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhh
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNA 127 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ 127 (329)
.++.+|.|.|+|++|+.+++.|.+. +.++++|.. +.+..
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~---g~~v~vid~--~~~~~ 43 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLAS---DIPLVVIET--SRTRV 43 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT---TCCEEEEES--CHHHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEEC--CHHHH
Confidence 3456899999999999999999875 368888864 44443
No 119
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.69 E-value=0.66 Score=38.20 Aligned_cols=83 Identities=14% Similarity=0.037 Sum_probs=59.5
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+..|||+|. +++|..+++.|.+.. ++|+.||-. ++.+ .|.+ .
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g---~~V~pVnP~-----------~~~i------------------~G~~--~ 49 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG---HEFIPVGRK-----------KGEV------------------LGKT--I 49 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT---CCEEEESSS-----------CSEE------------------TTEE--C
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC---CeEEEECCC-----------CCcC------------------CCee--c
Confidence 468999994 889999999998753 488888742 2221 2221 1
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISA 208 (329)
+ .+.+++| . +|+|+-++......+......+.|+|.|+++.
T Consensus 50 -y-~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~ 90 (122)
T 3ff4_A 50 -I-NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNP 90 (122)
T ss_dssp -B-CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECT
T ss_pred -c-CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECC
Confidence 1 3455665 2 89999999888777888888888999877753
No 120
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=91.54 E-value=0.035 Score=52.66 Aligned_cols=93 Identities=18% Similarity=0.182 Sum_probs=54.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
.++||.|.|.|.||+.+++.|.+. .++.++.+ +.+.+..+-+ +...+.+ ..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~----~~~~~~~~~~-------~~~~~~~----------------d~ 65 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDV----NNENLEKVKE-------FATPLKV----------------DA 65 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEES----CHHHHHHHTT-------TSEEEEC----------------CT
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEc----CHHHHHHHhc-------cCCcEEE----------------ec
Confidence 457999999999999999988643 23333222 2222222211 0111111 11
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISA 208 (329)
.|++.+.=.-.+.|+||-++|.+....-+...+++|+ -+++.
T Consensus 66 ~d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~ 107 (365)
T 3abi_A 66 SNFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDV 107 (365)
T ss_dssp TCHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEEC
T ss_pred CCHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEee
Confidence 2222211111378999999999988888888889998 45554
No 121
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=90.61 E-value=1.3 Score=36.94 Aligned_cols=86 Identities=19% Similarity=0.152 Sum_probs=56.3
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+.+|+|+|. |++|+.+++.|.+.. ++|..||-. .. ++. +.|. ++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G---~~v~~vnp~----~~---------------------g~~--i~G~--~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG---YHVIPVSPK----VA---------------------GKT--LLGQ--QG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT---CCEEEECSS----ST---------------------TSE--ETTE--EC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC---CEEEEeCCc----cc---------------------ccc--cCCe--ec
Confidence 357999998 899999999987653 466666532 00 011 1232 22
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISA 208 (329)
+ .++++++ ..+|+|+-++......+-+...+++|++.|++..
T Consensus 61 ~--~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 Y--ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp C--SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 3456665 2789999999875555555566678999988753
No 122
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=90.60 E-value=0.15 Score=45.31 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=24.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|||.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~--g~~V~~~~R 33 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH--IDHFHIGVR 33 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT--CTTEEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC--CCcEEEEEC
Confidence 4799999 9999999999987652 246666543
No 123
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=90.60 E-value=0.7 Score=42.91 Aligned_cols=88 Identities=20% Similarity=0.113 Sum_probs=54.7
Q ss_pred CeeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 85 ~~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+.+||+|+|+ |++|+.+++.+.+. ++++|+.-++. .. | .. +.| ++++.
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~---g~~~V~~V~p~---~~----------g-----------~~--~~G--~~vy~ 54 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY---GTKMVGGVTPG---KG----------G-----------TT--HLG--LPVFN 54 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTT---CT----------T-----------CE--ETT--EEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCC---cc----------c-----------ce--eCC--eeccC
Confidence 4579999996 99999999988764 25666443331 00 0 00 122 12221
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
+.++++- +..+|+|+.+|......+.+...+++|++.+|+
T Consensus 55 --sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 55 --TVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp --SHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred --CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222211 126789999988888888888888889887554
No 124
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=90.20 E-value=0.36 Score=45.99 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|||+|||+||+.+++.+... ++++++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f---g~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF---GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhccc---CceeeecC
Confidence 5899999999999999998765 47887764
No 125
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.15 E-value=0.26 Score=47.34 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF---GLAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999998754 478887754
No 126
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=90.10 E-value=0.36 Score=43.48 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=24.6
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++++|.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 35 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYA 35 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEE
Confidence 346899999 8999999999998863 4555553
No 127
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=90.04 E-value=1.5 Score=44.26 Aligned_cols=141 Identities=18% Similarity=0.161 Sum_probs=81.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------CChhhhhhhccccccc-cccCceEEEecCCeEEEC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~---------~d~~~~ayLLkyDS~h-G~F~g~V~v~~~~~L~in 155 (329)
..+|+|-|||-+|..+++.|.+. .-.+|+|.|. .|.+.+..|+++-..+ |...+- .+. ..
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~---GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~----~~~---~~ 321 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHL---NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY----LNH---SS 321 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHT---TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG----GGT---CS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC---CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH----Hhh---cC
Confidence 36899999999999999999876 3688988884 3455555665432221 221110 000 00
Q ss_pred CeEEEEEecCCCCCCCCccCCCcEEEcCC-CCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCce
Q 020217 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANI 234 (329)
Q Consensus 156 Gk~I~V~~~~~P~~idW~~~GiDiVvesT-G~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~I 234 (329)
| .+.+ +++++ | +..+||.+-|+ +..++.+.+...++.+||- |+= +++.|+ -++- .+.+.. .+|
T Consensus 322 ~--a~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~-V~E----gAN~p~-T~eA-~~~L~~--rGI 385 (470)
T 2bma_A 322 T--AKYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCIL-VGE----GANMPS-TVDA-INLFKS--NNI 385 (470)
T ss_dssp S--CEEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCE-EEC----CSSSCB-CHHH-HHHHHH--TTC
T ss_pred C--cEEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcEE-EEe----CCCCCC-CHHH-HHHHHH--CCc
Confidence 1 0121 12333 7 46899999875 7778889998888888863 442 234553 2221 122322 456
Q ss_pred EEcCCchhhhhhhHHHhh
Q 020217 235 VSNASCTTNCLAPFVKVM 252 (329)
Q Consensus 235 ISnASCTTn~LaPvlKvL 252 (329)
+=.|.-.+|+=.....-+
T Consensus 386 l~~PD~~aNAGGV~~S~~ 403 (470)
T 2bma_A 386 IYCPSKAANAGGVAISGL 403 (470)
T ss_dssp EEECHHHHTTHHHHHHHH
T ss_pred EEEChHHhhCCCceeeHH
Confidence 666666666655544443
No 128
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=89.97 E-value=0.36 Score=43.16 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEEC
Confidence 5899999 8999999999998763 46665543
No 129
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=89.91 E-value=0.28 Score=46.75 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+-
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~---G~~V~~~d~ 172 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVLCYDV 172 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHHC---cCEEEEECC
Confidence 35899999999999999999765 378887754
No 130
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=89.88 E-value=0.99 Score=43.52 Aligned_cols=93 Identities=24% Similarity=0.262 Sum_probs=55.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
.++||+|+|+| +|+.-++++.... +.+++|+|-|. +.+....+- ..+| ++++
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~-~~~~a~~~a---~~~g--------------------v~~~-- 57 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQ-GSARSRELA---HAFG--------------------IPLY-- 57 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECC-SSHHHHHHH---HHTT--------------------CCEE--
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECC-CHHHHHHHH---HHhC--------------------CCEE--
Confidence 56899999999 7998888775432 35999999987 333332211 1111 0111
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCC----hhhHHHHHHcCCCEEEEeCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~----~e~a~~Hl~aGakkVIISAP 209 (329)
.+.+++. .++|+|+-+|....- .+.+...|++|. -|++--|
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 2233332 157888778877665 466778888885 4666555
No 131
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.88 E-value=0.83 Score=40.99 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=26.1
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 456899999 9999999999998763 47666644
No 132
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=89.87 E-value=0.3 Score=46.48 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=27.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
..+|||+|+|+||+.+++.|... +++|++.+..
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~---G~~V~~~dr~ 169 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL---GMHVIGVNTT 169 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred CCeEEEECcCHHHHHHHHHHHhC---CCEEEEECCC
Confidence 35899999999999999999765 4788888653
No 133
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=89.66 E-value=1.3 Score=36.69 Aligned_cols=87 Identities=16% Similarity=0.048 Sum_probs=57.7
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+.+|+|+|. |++|+.+++.|.+.. +++..||-. +. ++ . +.|. ++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G---~~v~~vnp~----~~-----~~----------------~--i~G~--~~ 60 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVNPR----FQ-----GE----------------E--LFGE--EA 60 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEECGG----GT-----TS----------------E--ETTE--EC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC---CEEEEeCCC----cc-----cC----------------c--CCCE--Ee
Confidence 358999997 899999999988753 477666531 10 11 1 1232 22
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+ .+.++++ ..+|+|+-++......+-+....+.|+|.+++++.
T Consensus 61 ~--~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 61 V--ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp B--SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred c--CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 1 2344454 26899998888766666677777889999888753
No 134
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=89.52 E-value=0.3 Score=46.26 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~---G~~V~~~dr 170 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW---GFPLRCWSR 170 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT---TCCEEEEES
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEEcC
Confidence 35899999999999999998754 478888864
No 135
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.42 E-value=0.33 Score=46.29 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 171 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF---GMKVLGVSR 171 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred cceEEEEEECHHHHHHHHHHHhC---CCEEEEEcC
Confidence 35899999999999999999764 478888764
No 136
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=89.26 E-value=0.33 Score=46.60 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~---G~~V~~~d~ 179 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM---GAKVIAYDV 179 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCeEEEEecCHHHHHHHHHHhhC---CCEEEEECC
Confidence 35899999999999999998765 478887754
No 137
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.23 E-value=0.34 Score=45.87 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=26.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM---GATVIGEDV 177 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 378777754
No 138
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.14 E-value=0.35 Score=45.37 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~dr 155 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAAL---GAQVRGFSR 155 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368777653
No 139
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=89.10 E-value=0.43 Score=43.06 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=25.1
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|+.+|.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~ 42 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFT 42 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC---CcEEEEE
Confidence 445899999 8999999999998763 4555553
No 140
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=89.02 E-value=0.36 Score=45.81 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 176 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF---GAKVIAYDP 176 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368776653
No 141
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=89.00 E-value=1.8 Score=35.89 Aligned_cols=83 Identities=25% Similarity=0.231 Sum_probs=55.4
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInGf----GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+.+|+|+|. |++|+.+++.|.+.. ++++.||-. ++. +.|. ++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G---~~v~~Vnp~-----------~~~------------------i~G~--~~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPK-----------YEE------------------VLGR--KC 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT-----------CSE------------------ETTE--EC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC---CEEEEECCC-----------CCe------------------ECCe--ec
Confidence 358999997 799999999888753 467667532 011 1232 22
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIIS 207 (329)
+ .++++++ ..+|+|+-++......+-+...+++|++.++++
T Consensus 68 y--~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 68 Y--PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp B--SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEC
Confidence 1 2344554 268999988887655666667778899988775
No 142
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.95 E-value=0.37 Score=46.37 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 191 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF---GMNVLVWGR 191 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998764 378887753
No 143
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=88.65 E-value=0.4 Score=45.75 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 196 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF---GMKTIGYDP 196 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999998754 378887754
No 144
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=88.60 E-value=0.43 Score=47.11 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=28.5
Q ss_pred eeEEEEcCChhHHHHHHHHHh-CCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~-r~~~~l~vVaInd~ 121 (329)
.+|+|.|||+||+.+++.|.+ . .++|++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~---G~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF---GMKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc---CCEEEEEeCC
Confidence 589999999999999999987 5 4799999886
No 145
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.52 E-value=0.36 Score=46.42 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~---G~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF---GCNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---CCEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHC---CCEEEEeCC
Confidence 5899999999999999998754 478777754
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.42 E-value=0.51 Score=37.77 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|.|+|++|+.+++.|.++. .+++++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG---KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 48999999999999999998753 57777754
No 147
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.41 E-value=0.61 Score=36.45 Aligned_cols=31 Identities=23% Similarity=0.539 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|+|.|+|++|+.+++.|.+.. .+++++..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998753 57777743
No 148
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.30 E-value=0.38 Score=46.68 Aligned_cols=32 Identities=25% Similarity=0.478 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f---G~~V~~~d~ 207 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF---RARIRVFDP 207 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS---CCEEEEECS
T ss_pred CCEEEEecCCcccHHHHHhhhhC---CCEEEEECC
Confidence 35899999999999999988543 478887754
No 149
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=88.24 E-value=0.45 Score=44.83 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++++.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF---DMDIDYFDT 177 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 378888765
No 150
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=88.24 E-value=0.34 Score=46.07 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 176 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW---GATLQYHEA 176 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS---CCEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999987543 478877754
No 151
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=88.17 E-value=0.45 Score=45.63 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 199 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF---GFNVLFYDP 199 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CCEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 378777653
No 152
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=88.04 E-value=1.2 Score=44.58 Aligned_cols=33 Identities=39% Similarity=0.662 Sum_probs=28.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
..+|+|-|||-+|+.+++.|.+. ...+|+|.|.
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~---GakvVavsD~ 267 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH---GARVVAVQDH 267 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEEECS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 36899999999999999999886 3699999886
No 153
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.85 E-value=0.49 Score=44.45 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 175 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAF---GMRVVYHAR 175 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEEECHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368777654
No 154
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.83 E-value=0.49 Score=44.29 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++++.
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 173 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL---GMNILLYDP 173 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CceEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998765 368877754
No 155
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.82 E-value=0.39 Score=45.01 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF---GMRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhh---CcEEEEEec
Confidence 5899999999999999998764 378888754
No 156
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=87.80 E-value=0.49 Score=45.40 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 202 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF---GMSVRYWNR 202 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEcC
Confidence 5899999999999999998754 367766643
No 157
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=87.60 E-value=0.49 Score=46.27 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|||+|+|+||+.+++.|... +++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL---GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999999765 37877764
No 158
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=87.55 E-value=0.56 Score=41.79 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=24.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~ 35 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG---HPTFLLV 35 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEE
Confidence 5799999 8999999999998763 4555553
No 159
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.54 E-value=0.51 Score=44.69 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
..+|||+|+|+||+.+++.|... +++|++.+..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~~ 178 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF---GAKVITYDIF 178 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999998764 3788777643
No 160
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.40 E-value=0.51 Score=46.18 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.+... +++|++.+-
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~---G~~V~~~d~ 176 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL---GMYVYFYDI 176 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEEcC
Confidence 5899999999999999998764 378877653
No 161
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=87.15 E-value=0.57 Score=43.97 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|||+|+|+||+.+++.|... +++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 173 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM---GMKVLAYDI 173 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998764 368877754
No 162
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=87.13 E-value=0.55 Score=45.83 Aligned_cols=31 Identities=19% Similarity=0.413 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..+|||+|+|+||+.+++.|... +++|++.+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d 146 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL---GWKVLVCD 146 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC---CCEEEEEc
Confidence 35899999999999999998764 37877664
No 163
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=86.80 E-value=0.61 Score=44.43 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHH-hCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~-~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|. .. +++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~---G~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL---GMKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc---CCEEEEECC
Confidence 58999999999999999987 54 368777654
No 164
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.65 E-value=0.79 Score=37.41 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|.|+|++|+.+++.|.+.. .++++|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG---QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 47999999999999999998753 57777754
No 165
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=86.50 E-value=0.59 Score=41.61 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=23.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG---NPTYALV 33 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT---CCEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCC---CcEEEEE
Confidence 4799999 8999999999998753 3555543
No 166
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=86.31 E-value=0.64 Score=42.59 Aligned_cols=31 Identities=19% Similarity=0.168 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R 42 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH---RPTYILAR 42 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CCEEEEEC
Confidence 5899999 8999999999998763 45555544
No 167
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=86.13 E-value=0.85 Score=44.81 Aligned_cols=107 Identities=15% Similarity=0.160 Sum_probs=58.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc-cccccccccCceEEEecCCeE--EECCeEEEEE
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETI--SVDGKLIKVV 162 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL-kyDS~hG~F~g~V~v~~~~~L--~inGk~I~V~ 162 (329)
.||+|.| +|.||...++++... ++++++++.-..+++.+.... +|... -+.+.+.... .+. . .+.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~~l~~q~~~f~p~------~v~v~~~~~~~~~l~--~-~~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLELAFKIVKEFNVK------NVAITGDVEFEDSSI--N-VWK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHHHHHHHHHHHTCC------EEEECSSCCCCCSSS--E-EEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHHHHHHHHHHcCCC------EEEEccHHHHHHHHH--H-Hcc
Confidence 6899999 799999999988765 468999884333555554433 23220 1111011100 000 0 010
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
......++- ....+|+|+.++-.+...+-.-..+++| |+|.+
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaL 114 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCL 114 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEE
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 000000100 0125899999988877776666777888 55555
No 168
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.89 E-value=6.4 Score=33.67 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=25.9
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG---HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC---CeEEEEEC
Confidence 46899999 8999999999998863 47766644
No 169
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.82 E-value=0.65 Score=44.18 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|||+|+|+||+.+++.|... +++|++.+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~---G~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF---DCPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999998754 36766554
No 170
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.72 E-value=0.63 Score=45.54 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF---DVHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhC---CCEEEEEcC
Confidence 5899999999999999998754 378877754
No 171
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.60 E-value=0.65 Score=40.22 Aligned_cols=31 Identities=32% Similarity=0.381 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|||.|.|+|++|+.+++.|.++. .++++|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g---~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK---YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 48999999999999999998753 57887754
No 172
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.26 E-value=0.7 Score=43.49 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|+|+|+|+||+.+++.|... .++|++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~ 186 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF---GVQRFLYTG 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCCEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 367776653
No 173
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.16 E-value=0.72 Score=43.63 Aligned_cols=31 Identities=26% Similarity=0.282 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|+|+|+|+||+.+++.|... .++|++.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~---G~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF---GVKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999998754 368776654
No 174
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.15 E-value=0.82 Score=43.15 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|+|+|+|+||+.+++.|... .++|++.+.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~ 181 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF---NMRILYYSR 181 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998764 368777654
No 175
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.05 E-value=0.68 Score=44.53 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCce-EEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~-vVaInd 120 (329)
.+|||+|+|+||+.+++.|... .++ |++.+.
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~---G~~~V~~~d~ 196 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF---NPKELLYYDY 196 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---CCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCcEEEEECC
Confidence 5899999999999999998754 366 777753
No 176
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.68 E-value=0.84 Score=45.12 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL---GMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999998765 37887775
No 177
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.61 E-value=0.96 Score=41.47 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|+|+|+|+||+.+++.|.... ++|++.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG---AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 58999999999999999987652 57777754
No 178
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=84.01 E-value=0.68 Score=44.75 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=52.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEeCCCChhhhhhhcc-ccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l--~vVaInd~~d~~~~ayLLk-yDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+||+|.|.|.||+.+++.|.+.. .+ +++ +-+. +.+....+.+ +... + ...+. .+.+ .
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~-v~~r-~~~~~~~la~~l~~~-~--~~~~~------------~~~~-D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHIT-LASR-TLSKCQEIAQSIKAK-G--YGEID------------ITTV-D 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEE-EEES-CHHHHHHHHHHHHHT-T--CCCCE------------EEEC-C
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEE-EEEC-CHHHHHHHHHHhhhh-c--CCceE------------EEEe-c
Confidence 58999999999999999998653 33 444 4333 2333222221 1100 0 00010 0000 0
Q ss_pred cCCCCCCC--CccCCCcEEEcCCCCCCChhhHHHHHHcCCCE
Q 020217 164 NRDPLQLP--WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKK 203 (329)
Q Consensus 164 ~~~P~~id--W~~~GiDiVvesTG~f~~~e~a~~Hl~aGakk 203 (329)
..+++++. ..+.++|+||.++|.+....-+...+++|+.-
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~v 103 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPY 103 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCE
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCE
Confidence 01111110 01124899999999988777777888889864
No 179
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.94 E-value=0.86 Score=38.14 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-CCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r-~~~~l~vVaInd 120 (329)
..+|.|.|+|++|+.+++.|.+. . .+++++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG---KISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC---SCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC---CeEEEEEC
Confidence 35899999999999999999764 3 57777754
No 180
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=83.91 E-value=1 Score=39.34 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
++||+|+|.|.+|..+++.|.+.. .+++.+.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g---~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ---IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT---CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECC
Confidence 479999999999999999998753 577664554
No 181
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.71 E-value=1.1 Score=41.18 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|.|+|+||+.+++.|... .++|++.+.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~---G~~V~~~d~ 188 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL---GANVKVGAR 188 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCEEEEEcccHHHHHHHHHHHHC---CCEEEEEEC
Confidence 35899999999999999998765 257777654
No 182
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.55 E-value=1 Score=40.51 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=24.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|++||+|+|.|.+|+.+++.|.... .+|++++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 35 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG---YSLVVSD 35 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred ccceEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 5579999999999999999987652 5765553
No 183
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=83.17 E-value=2.3 Score=39.50 Aligned_cols=87 Identities=20% Similarity=0.182 Sum_probs=53.3
Q ss_pred CeeeEEEEcC-ChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vV-aInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
...||+|.|. |+.|+.+++.+.+. ++++| .||-... | .. +.| ++++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~---g~~~v~~VnP~~~--------------g-----------~~--i~G--~~vy 53 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY---GTKIVAGVTPGKG--------------G-----------ME--VLG--VPVY 53 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCT--------------T-----------CE--ETT--EEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc---CCeEEEEECCCCC--------------C-----------ce--ECC--EEee
Confidence 3469999995 99999999988764 35655 4442100 0 00 223 2232
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
. +.++++- +..+|++|.++......+.+...+++|++.+|+
T Consensus 54 ~--sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 D--TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp S--SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred C--CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 1 1222221 126788888888877777777778888886665
No 184
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=83.01 E-value=1.6 Score=43.11 Aligned_cols=33 Identities=36% Similarity=0.433 Sum_probs=28.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHh-CCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~-r~~~~l~vVaInd~ 121 (329)
..+|+|-|||-+|+.+++.|.+ . ...+|+|.|.
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~---GakvVavsD~ 242 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQEL---GSKVVAVSDS 242 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CCEEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhc---CCEEEEEEeC
Confidence 3689999999999999999987 4 4799999886
No 185
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.77 E-value=0.68 Score=45.78 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=54.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCe--EEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGK--LIKVVS 163 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk--~I~V~~ 163 (329)
..+|.|.|-|+||..+++.|.++ .++..|.. |.+...+|-+ .+ ++.++++|. ...++.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~~----~~v~iIE~--d~~r~~~la~------~l--------~~~~Vi~GD~td~~~L~ 294 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQT----YSVKLIER--NLQRAEKLSE------EL--------ENTIVFCGDAADQELLT 294 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHHH------HC--------TTSEEEESCTTCHHHHH
T ss_pred ccEEEEEcchHHHHHHHHHhhhc----CceEEEec--CHHHHHHHHH------HC--------CCceEEeccccchhhHh
Confidence 35899999999999999998542 56666654 3333332211 11 234445442 222322
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHH-HcCCCEEEEe
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI-QAGAKKVIIT 207 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl-~aGakkVIIS 207 (329)
+. .++ ..|++|=.|+....---+.... +.|++|+|.-
T Consensus 295 ee---~i~----~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 295 EE---NID----QVDVFIALTNEDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp HT---TGG----GCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred hc---Cch----hhcEEEEcccCcHHHHHHHHHHHHcCCcccccc
Confidence 22 222 5579999998753332233333 3599997653
No 186
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.62 E-value=1 Score=44.00 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=29.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhh
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNAS 128 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~a 128 (329)
.+|.|.|+||+|+.+++.|.+. +.++++|.. +++...
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~---g~~vvvId~--d~~~v~ 41 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS---GVKMVVLDH--DPDHIE 41 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT---TCCEEEEEC--CHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC---CCCEEEEEC--CHHHHH
Confidence 4799999999999999999875 368888854 444443
No 187
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=82.59 E-value=1.2 Score=39.41 Aligned_cols=24 Identities=13% Similarity=0.309 Sum_probs=21.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
|++||+|+|.|.+|..+++.|.+.
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~ 24 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINK 24 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCCeEEEECccHHHHHHHHHHHhC
Confidence 346899999999999999999875
No 188
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=82.49 E-value=1.8 Score=42.85 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=28.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
.+|+|-|||-+|..+++.|.+. ...+|+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~---GakVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM---GAKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEECC
Confidence 5899999999999999999875 4799999986
No 189
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=82.43 E-value=4.3 Score=40.76 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=78.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------CChhhhhhhcccccccc-ccCceEEEecCCeEEEC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLLG-TFKADVKIVDNETISVD 155 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~---------~d~~~~ayLLkyDS~hG-~F~g~V~v~~~~~L~in 155 (329)
..+|+|-|||-+|..+++.|.+.. ..+|+|.|. .|++.+..+.++...++ +....+ ... .+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~---~~~---~~ 309 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEKG---AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYL---KYS---KT 309 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT---CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGG---GTC---SS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhh---hcC---CC
Confidence 358999999999999999988753 477777773 34555544433332221 110000 000 01
Q ss_pred CeEEEEEecCCCCCCCCccCCCcEEEcC-CCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCce
Q 020217 156 GKLIKVVSNRDPLQLPWAELGIDIVIEG-TGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANI 234 (329)
Q Consensus 156 Gk~I~V~~~~~P~~idW~~~GiDiVves-TG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~I 234 (329)
.+ .+ +++++ |. ..+||.+=| ++.-++.+.+..-.+.+|| +|+-+ ++.|+ -++- .+.+. + .+|
T Consensus 310 a~---~v---~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~Eg----AN~p~-T~eA-~~iL~-~-rGI 372 (456)
T 3r3j_A 310 AK---YF---ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIVEG----ANMPT-HIKA-LHKLK-Q-NNI 372 (456)
T ss_dssp CE---EE---CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEECC----SSSCB-CTTH-HHHHH-T-TTC
T ss_pred ce---Ee---CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEEec----CCCCC-CHHH-HHHHH-H-CCC
Confidence 11 11 12332 64 578998887 6778888888877777885 34422 34453 1221 11232 2 467
Q ss_pred EEcCCchhhhhhhHHHhh
Q 020217 235 VSNASCTTNCLAPFVKVM 252 (329)
Q Consensus 235 ISnASCTTn~LaPvlKvL 252 (329)
+=.|.-..|+=..+..-+
T Consensus 373 ~~~PD~~aNAGGV~vS~~ 390 (456)
T 3r3j_A 373 ILCPSKAANAGGVAVSGL 390 (456)
T ss_dssp EEECHHHHTTHHHHHHHH
T ss_pred EEeChHHhcCCceeeehH
Confidence 777766666655554433
No 190
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=82.34 E-value=2.5 Score=41.84 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=29.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG 122 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~ 122 (329)
..+|+|-|||-+|+.+++.|.+. ...+|+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~---GakvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQ---GGKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHT---TCCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEEEecC
Confidence 36899999999999999999876 37899998863
No 191
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.68 E-value=1.4 Score=38.43 Aligned_cols=32 Identities=31% Similarity=0.354 Sum_probs=24.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+.+||+|.|+|.+|+.+++.|.... .+|++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g---~~V~~~~ 58 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG---FKVVVGS 58 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999987652 4666554
No 192
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=81.49 E-value=1.4 Score=34.42 Aligned_cols=31 Identities=26% Similarity=0.447 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|.|.|.+|+.+++.|.+.. .+++++..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG---HEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 47999999999999999998753 46665643
No 193
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=81.46 E-value=1.5 Score=40.81 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=26.8
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.|.+||+|+|+|.+|..+++.|.+.. ..+|++.+
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G--~~~V~~~d 55 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRN--AARLAAYD 55 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTT--CSEEEEEC
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcC--CCeEEEEe
Confidence 46679999999999999999988642 15766664
No 194
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.29 E-value=1.6 Score=39.04 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=25.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+++||+|+|.|.+|..++..|.... .+|+.++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC---CcEEEEEC
Confidence 3469999999999999999987653 47666643
No 195
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=81.24 E-value=0.73 Score=40.02 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=25.3
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++++|.|-| .|.||+.+++.|.++. ..+|+++.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~ 55 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQ--TIKQTLFA 55 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEE
Confidence 346899999 9999999999998753 24666554
No 196
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=81.02 E-value=1.5 Score=38.76 Aligned_cols=22 Identities=18% Similarity=0.493 Sum_probs=19.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
+||+|+|+|.+|+.+++.|...
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~ 25 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQT 25 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS
T ss_pred cEEEEECCCHHHHHHHHHHHhC
Confidence 6999999999999999988754
No 197
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.89 E-value=1.6 Score=40.70 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=25.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+.+||+|+|+|.||..+++.|.... ...+|++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~d 65 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYD 65 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEE
Confidence 3468999999999999999998753 112666654
No 198
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=80.86 E-value=1.1 Score=40.12 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|+.+++.|... ..+|++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA---GHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT---TCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC---CCEEEEEc
Confidence 6899999999999999998764 25776665
No 199
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=80.78 E-value=1.6 Score=39.83 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=25.8
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+++||+|+|+|.+|..+++.|.+.. .+|++.+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG---LSTWGAD 37 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 4469999999999999999998753 5777664
No 200
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=80.77 E-value=2.1 Score=39.60 Aligned_cols=130 Identities=16% Similarity=0.146 Sum_probs=69.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
-+|.|+|.|.||...+.++.... .+|+++... .+.+..+.+ .|. +.+ + .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~--~~~~~~~~~----lGa----------~~v---------~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG---AEVSVFARN--EHKKQDALS----MGV----------KHF---------Y--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEECSS--STTHHHHHH----TTC----------SEE---------E--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CeEEEEeCC--HHHHHHHHh----cCC----------Cee---------c--CC
Confidence 47999999999999988876552 577776432 233333322 121 111 1 22
Q ss_pred CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCcccc-CCCCCceEEcCCchhhhh
Q 020217 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDY-DHEVANIVSNASCTTNCL 245 (329)
Q Consensus 167 P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~-~~~~~~IISnASCTTn~L 245 (329)
++.+ .+ ++|+|||++|.....+.+-..++.|-+ +++-+.......+.+-+ ...+ ..+ ..++..-.-+...+
T Consensus 228 ~~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G~-iv~~G~~~~~~~~~~~~---~~~~~~~~-~~i~g~~~~~~~~~ 299 (348)
T 3two_A 228 PKQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNGD-LALVGLPPVEVAPVLSV---FDFIHLGN-RKVYGSLIGGIKET 299 (348)
T ss_dssp GGGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEEE-EEECCCCCGGGCCEEEH---HHHHHTCS-CEEEECCSCCHHHH
T ss_pred HHHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCCE-EEEECCCCCCCcccCCH---HHHHhhCC-eEEEEEecCCHHHH
Confidence 3322 22 899999999987565655555555442 33333221012221210 1112 222 45555544455556
Q ss_pred hhHHHhhhh
Q 020217 246 APFVKVMDE 254 (329)
Q Consensus 246 aPvlKvL~d 254 (329)
.-+++.+.+
T Consensus 300 ~~~~~l~~~ 308 (348)
T 3two_A 300 QEMVDFSIK 308 (348)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 667776664
No 201
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=80.76 E-value=1.7 Score=39.13 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=25.9
Q ss_pred CeeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|++||+|+|. |.+|+.+++.|.... .+|++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA---HHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS---SEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 4569999999 999999999998652 5776654
No 202
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=80.45 E-value=8.5 Score=39.10 Aligned_cols=34 Identities=24% Similarity=0.462 Sum_probs=28.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+..+|+|-|||-+|..+++.|.+. ...+|+|.|.
T Consensus 243 ~g~tVaVQG~GNVG~~aa~~L~e~---GakVVavsDs 276 (501)
T 3mw9_A 243 GDKTFVVQGFGNVGLHSMRYLHRF---GAKCITVGES 276 (501)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 346899999999999999999875 3689998873
No 203
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=80.37 E-value=1.5 Score=44.04 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|+|+|+||+.+++.|... .++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 173 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF---GAYVVAYDP 173 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998754 368877743
No 204
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.74 E-value=1.4 Score=43.41 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=30.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhh
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayL 130 (329)
.|||.|.|+|++|+.+++.|.+. +.++++|.. |.+.+..|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~---~~~v~vId~--d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE---NNDITIVDK--DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST---TEEEEEEES--CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC---CCCEEEEEC--CHHHHHHH
Confidence 37999999999999999998654 368888854 44444433
No 205
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=79.58 E-value=1.1 Score=42.18 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=18.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
|||+|.|.|.||..++-.|..+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~ 22 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 5899999999999988776654
No 206
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=79.47 E-value=3.1 Score=38.15 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=24.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
-+|-.|+| .||+||.+.+++.. +++++|+.-|
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~---~~~elv~~id 44 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSE---KGHELVLKVD 44 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEEE
T ss_pred cceeEEEEecCHHHHHHHHHHhC---CCCEEEEEEc
Confidence 46889999 79999999887643 3578877633
No 207
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=79.43 E-value=1.8 Score=38.90 Aligned_cols=31 Identities=16% Similarity=0.337 Sum_probs=24.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++||+|+|+|.+|+.+++.|... ..+|++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE---GVTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHC---CCeEEEEe
Confidence 46899999999999999998764 25766553
No 208
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=79.24 E-value=3.3 Score=41.40 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=78.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------C-Chhhhhhhccccccc-cccCceEEEecCCeEEEC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------G-GVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~---------~-d~~~~ayLLkyDS~h-G~F~g~V~v~~~~~L~in 155 (329)
.+|+|-|||-+|..+++.|.+. ...+|+|.|. . +++.+..|+++-..+ |....- .+ .+ +
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~---GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~~--~ 300 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAEL---GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-KF--G 300 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHH---TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-HH--T
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-cc--C
Confidence 5899999999999999999875 3699998883 1 333445555433221 222100 00 00 1
Q ss_pred CeEEEEEecCCCCCCCCccCCCcEEEcCC-CCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCC-c
Q 020217 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA-N 233 (329)
Q Consensus 156 Gk~I~V~~~~~P~~idW~~~GiDiVvesT-G~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~-~ 233 (329)
.+ .+. ++++ | +..+|+.+-|+ +..++.+.+......||| +|.- +++.|+- +.- .+.|. . . +
T Consensus 301 a~---~i~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~E----gAN~p~T-~eA-~~~l~-~-~~G 363 (449)
T 1bgv_A 301 VQ---FFP---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIE----VANMPTT-NEA-LRFLM-Q-QPN 363 (449)
T ss_dssp CE---EEE---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEEC----CSSSCBC-HHH-HHHHH-H-CTT
T ss_pred CE---EeC---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEEe----CCCCcCC-HHH-HHHHH-H-cCC
Confidence 12 212 2333 7 46899999875 677888888876667885 3442 2345531 111 12232 2 3 5
Q ss_pred eEEcCCchhhhhhhHHHhh
Q 020217 234 IVSNASCTTNCLAPFVKVM 252 (329)
Q Consensus 234 IISnASCTTn~LaPvlKvL 252 (329)
|+=+|.-..|+=.....-+
T Consensus 364 i~~~PD~~aNaGGV~~S~~ 382 (449)
T 1bgv_A 364 MVVAPSKAVNAGGVLVSGF 382 (449)
T ss_dssp CEEECHHHHTTHHHHHHHH
T ss_pred EEEEChHHhcCCCceeehh
Confidence 6666666666655444433
No 209
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=79.09 E-value=1.8 Score=43.79 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..+|+|.|+|+||+.+++.|... .++|++.+
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~---G~~V~v~d 307 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGL---GATVWVTE 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEEe
Confidence 35899999999999999998754 36877664
No 210
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=78.90 E-value=2.1 Score=39.32 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++||+|+|+|.+|..+++.|.+.. .+|++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G---~~V~~~dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG---FKVTVWNR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CeEEEEeC
Confidence 369999999999999999998753 57766643
No 211
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.80 E-value=2.1 Score=38.62 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|+.+++.|.+.. .+|++.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG---CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CeEEEEc
Confidence 58999999999999999998753 5776664
No 212
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=78.55 E-value=3.4 Score=37.38 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=24.1
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..++|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~ 50 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG---RTVRGFD 50 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC---CEEEEEe
Confidence 346899999 8999999999998763 4666654
No 213
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=78.52 E-value=2 Score=39.72 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=26.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+.+||+|+|+|.+|+.+++.|.+. ..+|++.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~d 61 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA---GYALQVWN 61 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC---CCeEEEEc
Confidence 346999999999999999999875 35776664
No 214
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=78.31 E-value=2.2 Score=39.47 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=23.8
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
.++||+|+|.|.+|..++..|.+.. .+|..+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG---HEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC---CeEEEE
Confidence 4579999999999999999887642 466656
No 215
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=78.29 E-value=1.9 Score=43.35 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|+|.|+|+||+.+++.+... .++|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf---Ga~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA---GARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEe
Confidence 5899999999999999998765 36776653
No 216
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=78.23 E-value=2.4 Score=37.66 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=25.9
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+.+||+|+|+|.+|..+++.|.+.. .+|++.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G---~~V~~~~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG---HEVTIGTR 50 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 3479999999999999999998753 57666643
No 217
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=78.23 E-value=5 Score=37.29 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=52.7
Q ss_pred CeeeEEEEcC-ChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInGf-GRIGR~vlR~l~~r~~~~l~vV-aInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
...+|+|.|. |+.|+.+++.+.+.. +++| .|| +.. . ++. +.| ++++
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g---~~~V~~Vn-P~~---~---------------------g~~--i~G--~~vy 59 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECG---TKIVGGVT-PGK---G---------------------GQN--VHG--VPVF 59 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC-TTC---T---------------------TCE--ETT--EEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCC---CeEEEEeC-CCC---C---------------------Cce--ECC--Eeee
Confidence 3468999995 999999999988753 4444 454 310 0 011 123 2232
Q ss_pred ecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 163 ~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
. +.++++- +..+|+++.++......+.+...+++|++.+|+
T Consensus 60 ~--sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 D--TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp S--SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred C--CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 1 2222221 115788888888877777777788888886555
No 218
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.16 E-value=2 Score=38.84 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|..+++.|.+.. .+|++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 33 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG---YLLNVFD 33 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHhCC---CeEEEEc
Confidence 68999999999999999998753 5777664
No 219
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=78.13 E-value=2.7 Score=41.75 Aligned_cols=34 Identities=24% Similarity=0.491 Sum_probs=29.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+..+|+|-|||-+|..+++.|.+. ...+|+|.|.
T Consensus 220 ~g~~vaVqG~GnVG~~aa~~l~e~---GakVVavsD~ 253 (424)
T 3k92_A 220 QNARIIIQGFGNAGSFLAKFMHDA---GAKVIGISDA 253 (424)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH---TCEEEEEECS
T ss_pred ccCEEEEECCCHHHHHHHHHHHHC---CCEEEEEECC
Confidence 346899999999999999999875 3689999886
No 220
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.97 E-value=1.6 Score=39.85 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=25.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++||+|+|+|.+|+.+++.|.+. ..+|++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~---G~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW---PGGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS---TTCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHC---CCeEEEEe
Confidence 46899999999999999998764 25766664
No 221
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.94 E-value=2 Score=40.25 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
-+|.|.|.|.||..+++++.... .+|+++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG---SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 47999999999999999887652 47776643
No 222
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=77.60 E-value=2.2 Score=37.82 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+||+|+|.|.+|+.+++.|.... .++|.+-+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEeC
Confidence 68999999999999999887642 564445454
No 223
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.57 E-value=2.4 Score=37.73 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|.|.+|..+++.|.... .+|++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG---HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999988652 4766663
No 224
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.46 E-value=1.8 Score=43.04 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|.|.|.|.+|+.+++.|.+.. ..+|++++.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~--g~~V~v~~R 55 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAND--DINVTVACR 55 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTST--TEEEEEEES
T ss_pred CCEEEEECChHHHHHHHHHHHhCC--CCeEEEEEC
Confidence 358999999999999999998652 357666654
No 225
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=77.31 E-value=2.1 Score=39.34 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=25.9
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+.+||+|+|+|.+|..+++.|.+.. .+|++.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G---~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG---KRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999998753 5776664
No 226
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=77.10 E-value=1.3 Score=41.32 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=24.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
|++||+|.|.|.+|..++-.|.... .++ |.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 3469999999999999988887653 236 444454
No 227
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=77.09 E-value=4.3 Score=37.84 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=24.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 36 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQV 36 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 35799999 9999999999998753 4666553
No 228
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=77.03 E-value=2.6 Score=37.67 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.||..+++.|..... ..+|++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 489999999999999999876521 23666553
No 229
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=76.95 E-value=2.3 Score=42.48 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|+|+|+|+||+.+++.|... .++|++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~---Ga~Viv~D 241 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF---GARVVVTE 241 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999999765 36766653
No 230
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=76.84 E-value=2.1 Score=42.36 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
.+|+|-|||-+|+.+++.|.+. ...+|+|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~---GakVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERL---GMRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 5899999999999999999875 3799989886
No 231
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=76.70 E-value=1.8 Score=43.56 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|.|+|+||+.+++.|... +++|++.+-
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~---G~~Viv~d~ 288 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGL---GARVYITEI 288 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH---TCEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---cCEEEEEeC
Confidence 35899999999999999998764 368777643
No 232
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=76.45 E-value=2.8 Score=36.40 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=23.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
..+||+|+|.|.+|..+++.|.+.. .+|+.+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g---~~V~~~ 48 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAG---HEVTYY 48 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 3468999999999999999987642 455444
No 233
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=75.97 E-value=2.5 Score=37.88 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=25.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++||+|+|+|.+|..+++.|.... ...+|++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 368999999999999999887642 135766553
No 234
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=75.79 E-value=14 Score=34.24 Aligned_cols=86 Identities=17% Similarity=0.073 Sum_probs=51.6
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCC-ChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 86 ~vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~-d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
+.||.++|.|.+|.. +++.|.++. .+|. +.|.. .......|-+ . | |++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G---~~V~-~~D~~~~~~~~~~L~~---------------~-------g--i~v~~ 55 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG---FEVS-GCDAKMYPPMSTQLEA---------------L-------G--IDVYE 55 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT---CEEE-EEESSCCTTHHHHHHH---------------T-------T--CEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC---CEEE-EEcCCCCcHHHHHHHh---------------C-------C--CEEEC
Confidence 358999999999995 889888764 4544 44431 1111111110 0 1 12333
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGa 201 (329)
..+++++.+ .++|+||-+.|.-.+.+......+.|.
T Consensus 56 g~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 56 GFDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp SCCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred CCCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 345555431 257999999999877766666666665
No 235
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=75.68 E-value=2.3 Score=39.31 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=26.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|..|||++|+|.+|..+++.|.+.. .+|++.|-
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G---~~V~v~dr 36 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAG---YELVVWNR 36 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTT---CEEEEC--
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 6668999999999999999998753 57766653
No 236
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=75.30 E-value=3 Score=41.84 Aligned_cols=100 Identities=21% Similarity=0.256 Sum_probs=60.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC---------CChhhhhhhccc-cccccccCceEEEecCCeEEEC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKY-DSLLGTFKADVKIVDNETISVD 155 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~---------~d~~~~ayLLky-DS~hG~F~g~V~v~~~~~L~in 155 (329)
..+|+|-|||-+|..+++.|.+.. -.+|+|.|. .|.+.+..|++. .+..|....-.+ +.+.
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~--~~g~---- 305 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFG---ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK--EFGL---- 305 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH--HHTC----
T ss_pred CCEEEEeCCChHHHHHHHHHHhcC---CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc--cCCc----
Confidence 368999999999999999998753 588888764 355555555432 222221100000 0011
Q ss_pred CeEEEEEecCCCCCCCCccCCCcEEEcC-CCCCCChhhHHHHHHcCCCE
Q 020217 156 GKLIKVVSNRDPLQLPWAELGIDIVIEG-TGVFVDGPGAGKHIQAGAKK 203 (329)
Q Consensus 156 Gk~I~V~~~~~P~~idW~~~GiDiVves-TG~f~~~e~a~~Hl~aGakk 203 (329)
+.+. +++ .|. ..+||.+=| ++.-++.+.+..-...|+|-
T Consensus 306 ----~~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 306 ----VYLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp ----EEEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred ----EEec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 1112 222 254 588988876 67778888888766668854
No 237
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=75.08 E-value=2.8 Score=40.02 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+||+|+|+|.+|..+++.|.+.. .+|++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG---HECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHhCC---CEEEEEeC
Confidence 369999999999999999998753 57776653
No 238
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=75.06 E-value=3.1 Score=37.91 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=24.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++||+|+|+|.+|+.+++.|.... .+|++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g---~~V~~~~ 60 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG---HTVTVWN 60 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC---CEEEEEe
Confidence 368999999999999999987642 4666554
No 239
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=74.87 E-value=2.5 Score=37.85 Aligned_cols=30 Identities=13% Similarity=0.383 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|+.+++.|.... .+|++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g---~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG---YPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT---CCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999999987652 4666554
No 240
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=74.82 E-value=3.1 Score=38.45 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=26.1
Q ss_pred ccCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 83 ~~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..|++||+|+|.|.+|..+++.|.+.. .+|..++.
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~G---~~V~~~~r 45 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENG---EEVILWAR 45 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 357899999999999999999987642 46666654
No 241
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=74.65 E-value=3.3 Score=33.26 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=26.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|..+|+|+|-|..|-.++..|..+ .++++.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~---G~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA---GHQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 567899999999999999888765 378777764
No 242
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=74.46 E-value=3 Score=40.27 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
.+|+|.|||.||+.+++.|.+. ..+|| +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~---GakVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA---GAQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEE-EEeC
Confidence 5899999999999999999875 36887 7776
No 243
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=74.32 E-value=3.6 Score=34.88 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=24.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||+|.| .|.+|+.+++.|.+.. .+|++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4799999 9999999999987642 57766653
No 244
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=74.08 E-value=7.3 Score=35.12 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=24.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|+|.|.+|...++.|.+.. -+|++|..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G---A~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG---AAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC---CCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998753 35555543
No 245
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=73.94 E-value=2.6 Score=38.34 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=24.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|-|.||...+.++... ..+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNA---GYVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEE
Confidence 4799999999999988887654 24888875
No 246
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=73.88 E-value=3 Score=36.77 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
+||+|+|+|.+|..+++.|.+.. .+|++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g---~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG---VEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEC
T ss_pred CeEEEEechHHHHHHHHHHHHCC---CeEEEe
Confidence 48999999999999999998652 576553
No 247
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=73.71 E-value=2.7 Score=37.31 Aligned_cols=29 Identities=28% Similarity=0.362 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|..+++.|.. . .+|++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g---~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R---FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T---SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-C---CeEEEEe
Confidence 489999999999999998875 3 4665554
No 248
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=73.45 E-value=3.9 Score=34.43 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=25.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEe
Confidence 4799999 8999999999998863 47766644
No 249
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=73.38 E-value=3.9 Score=34.11 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEc
Confidence 4799999 8999999999998863 57776654
No 250
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=72.71 E-value=3.4 Score=41.26 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|+|.|+|.||+.+++.|... .++|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~---Ga~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM---GSIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEe
Confidence 5899999999999999998765 35766553
No 251
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=72.15 E-value=3.3 Score=36.43 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|.|.+|..+++.|.... ..+|.+++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQG--GYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC--CCeEEEEC
Confidence 48999999999999999887642 03555553
No 252
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=71.84 E-value=11 Score=34.90 Aligned_cols=87 Identities=21% Similarity=0.212 Sum_probs=53.8
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vV-aInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~ 162 (329)
.+.+|+|.| .|+.|+.+++.+.+.. +++| .|| +.. . ++. +.| ++++
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g---~~~v~~Vn-P~~---~---------------------g~~--i~G--~~vy 59 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYG---TKVVAGVT-PGK---G---------------------GSE--VHG--VPVY 59 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEEC-TTC---T---------------------TCE--ETT--EEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCC---CcEEEEeC-CCC---C---------------------Cce--ECC--Eeee
Confidence 446899999 5999999999887642 4544 454 310 0 011 123 2232
Q ss_pred ecCCCCCCCCccCC-CcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 163 SNRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 163 ~~~~P~~idW~~~G-iDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
. +.++++- +.+ +|++|+++......+.+...+++|++.+|+
T Consensus 60 ~--sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 D--SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp S--SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred C--CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 1 2222221 113 899999998888888888888889986665
No 253
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=71.77 E-value=4.2 Score=35.82 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||+|+|.|.+|..++..|.+.. .+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG---HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CCEEEEEc
Confidence 48999999999999999987653 47666643
No 254
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=71.65 E-value=3.6 Score=39.19 Aligned_cols=31 Identities=35% Similarity=0.439 Sum_probs=25.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..||+|+|+|.||..+++.|.... .+|++.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G---~~V~~~d 38 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN---HSVFGYN 38 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC---CEEEEEe
Confidence 358999999999999999998653 5776664
No 255
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=71.58 E-value=4.1 Score=37.28 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=24.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++||+|+|.|.+|..++..|.... .+|+.+.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~ 34 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG---QSVLAWD 34 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 369999999999999999887642 5766664
No 256
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=71.30 E-value=5.6 Score=31.57 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=28.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+.+|.|+|.|..|+.+++.+... +.++++++=|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~--~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQG--KEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCcEEEEEEEC
Confidence 46899999999999999998764 35888888663
No 257
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=71.21 E-value=1.7 Score=39.71 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+||+|+|.|.||..+++.|... ..+|++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~---G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV---GHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT---TCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC---CCEEEEecC
Confidence 46999999999999999999865 368777754
No 258
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=71.18 E-value=3.9 Score=37.39 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=24.9
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+..||+|+| +|.||..+++.|.... .+|++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 445899999 9999999999987642 4665553
No 259
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=71.08 E-value=2.8 Score=37.81 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|..+++.|.+.. .+|++.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG---FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT---CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC---CeEEEEc
Confidence 48999999999999999988653 5666664
No 260
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=70.47 E-value=2.1 Score=34.50 Aligned_cols=29 Identities=17% Similarity=0.223 Sum_probs=22.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
.+|+|.|.|.+|+.+++.|.++ ..+++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~---g~~v~v~ 50 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP---QYKVTVA 50 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT---TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCEEEEE
Confidence 5899999999999999887653 3674434
No 261
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=70.40 E-value=8 Score=36.39 Aligned_cols=22 Identities=27% Similarity=0.591 Sum_probs=19.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
|||+|.|.|.||..++..+..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~ 22 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ 22 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5899999999999999877654
No 262
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=70.27 E-value=4 Score=38.28 Aligned_cols=31 Identities=32% Similarity=0.338 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|+|+|+|.||+.+++.|.... ++|++.+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G---~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG---VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc---CEEEEEEC
Confidence 58999999999999999987642 56665543
No 263
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=70.24 E-value=4.1 Score=37.09 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=24.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+||+|+|.|.+|..+++.|.....+.-+|++.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~d 36 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTN 36 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEe
Confidence 3689999999999999999987531112555443
No 264
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=69.88 E-value=4.3 Score=39.89 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=25.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|++||+|+|.|.+|..++..|.+.. .+|++++
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G---~~V~~~D 32 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG---ANVRCID 32 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC---CEEEEEE
Confidence 3469999999999999999988753 5777664
No 265
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=69.60 E-value=3.7 Score=37.89 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=24.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
.+||+|+|+|.+|..+++.|.... . +|++.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G---~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG---AIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS---CCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CCeEEEEc
Confidence 369999999999999999998652 4 555553
No 266
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=68.46 E-value=5.4 Score=35.45 Aligned_cols=30 Identities=27% Similarity=0.498 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|||.|-| .|-||+.|++.|.++. -+|+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 5899999 8999999999998863 4776664
No 267
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=68.02 E-value=6.6 Score=32.23 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEe
Confidence 5899999 8999999999998763 47666643
No 268
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=67.99 E-value=3.6 Score=36.98 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=25.9
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCC--CCC-ceEEEEeC
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRK--DSP-LDVVVVND 120 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~--~~~-l~vVaInd 120 (329)
.+++||+|+|.|.+|..++..|.... ... .+|..++.
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35579999999999999998887530 002 46666643
No 269
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=67.62 E-value=3.3 Score=36.36 Aligned_cols=22 Identities=18% Similarity=0.441 Sum_probs=19.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
+||+|+|.|.+|..+++.|...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC
Confidence 5899999999999999988754
No 270
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=70.72 E-value=1.1 Score=39.10 Aligned_cols=24 Identities=21% Similarity=0.116 Sum_probs=20.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
+.+||+|+|+|.||+.+++.|.+.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~ 41 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC 41 (201)
Confidence 446899999999999999988654
No 271
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=67.35 E-value=2.3 Score=40.00 Aligned_cols=32 Identities=28% Similarity=0.252 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+||+|.|.|.+|..++..|..... ++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~--~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL--GD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--Ce-EEEEeC
Confidence 599999999999999888876531 26 444454
No 272
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=67.21 E-value=3.9 Score=38.47 Aligned_cols=30 Identities=27% Similarity=0.362 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|.|.||...++++.... .+|+++.
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~ 225 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMG---AHVVAFT 225 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999999999999998886652 4666664
No 273
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=67.09 E-value=1.8 Score=39.09 Aligned_cols=22 Identities=32% Similarity=0.602 Sum_probs=17.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHh
Q 020217 86 KLKVAINGFGRIGRNFLRCWHG 107 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~ 107 (329)
++||+|+|.|.+|..+++.|..
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-
T ss_pred CceEEEEeCCHHHHHHHHHHHH
Confidence 4689999999999999988754
No 274
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=66.81 E-value=5.4 Score=33.65 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=25.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEc
Confidence 6899999 8999999999998763 57766643
No 275
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=66.39 E-value=4.7 Score=37.25 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCC-CCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~-~~l~vVaInd 120 (329)
++||+|+|.|.+|..+++.|..... +..+|++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 4689999999999999999876421 1146665543
No 276
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=66.28 E-value=6.3 Score=36.24 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=24.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|++||+|+|.|.||..++..|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG---HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 4579999999999999999887642 46666644
No 277
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=66.22 E-value=5.9 Score=38.22 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=27.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChh
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK 125 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~ 125 (329)
.+|+|.|+|.||+.+++.|.+. ..+|+ +.|. +.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~---GakVv-v~D~-~~~ 207 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE---GAKLV-VTDV-NKA 207 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS-CHH
T ss_pred CEEEEECchHHHHHHHHHHHHC---CCEEE-EEcC-CHH
Confidence 5899999999999999999876 35777 6665 444
No 278
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=66.11 E-value=35 Score=31.38 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
.+|.|.|.|.+||.++..|.+.. -+|..+|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G---~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG---LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 58999999999999999998753 466667653
No 279
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=66.08 E-value=5.1 Score=37.29 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=25.2
Q ss_pred Cee-eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKL-KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~v-kVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|++ ||+|+|.|.+|..++..|... ..+|.+++.
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~---G~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKK---CREVCVWHM 46 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTT---EEEEEEECS
T ss_pred hccCeEEEECCCHHHHHHHHHHHhC---CCEEEEEEC
Confidence 445 999999999999999988653 246666643
No 280
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.19 E-value=6.5 Score=34.60 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||.|-|.|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG---HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998763 46666643
No 281
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=64.76 E-value=7.3 Score=35.21 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.||+|+|.|.+|..+++.|... ..+|+.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~---G~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH---GFAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEe
Confidence 5899999999999999998865 35766653
No 282
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=64.48 E-value=3.4 Score=38.47 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
-+|.|.|.|.||...++++.... .+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG---HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 47999999999999988776542 47766643
No 283
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=64.15 E-value=3.9 Score=35.51 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=23.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..+|.|.|+|++|+.+++.|.+. +. +++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~---g~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS---EV-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS---EE-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhC---Ce-EEEEE
Confidence 45899999999999999998654 24 66663
No 284
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=63.88 E-value=7 Score=36.68 Aligned_cols=29 Identities=28% Similarity=0.149 Sum_probs=22.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaI 118 (329)
-+|.|+|.|.||...+.++.... . +|+++
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~ 213 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG---ATTVILS 213 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEE
Confidence 47999999999999988876542 4 66666
No 285
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=63.78 E-value=12 Score=35.76 Aligned_cols=143 Identities=18% Similarity=0.108 Sum_probs=71.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeCCCChhhhhhhcccccccc-ccCceEEEecCCeEEECCeEEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDSGGVKNASHLLKYDSLLG-TFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaInd~~d~~~~ayLLkyDS~hG-~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.+||+|.|.|.||..++..+..+. -+ +++.+ |. +.+.+. -...|-.|+ .|.. .. ++..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g--~~~ev~L~-Di-~~~~~~-g~a~DL~~~~~~~~------~~---------~i~~ 80 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKD--LADEVALV-DV-MEDKLK-GEMMDLEHGSLFLH------TA---------KIVS 80 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHC--CCSEEEEE-CS-CHHHHH-HHHHHHHHHGGGSC------CS---------EEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCCeEEEE-EC-CHHHHH-HHHHHhhhhhhccc------CC---------eEEE
Confidence 469999999999999988776542 12 44444 43 211110 001122222 2220 11 1222
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCCh---------hhHH------HHH-Hc--CCCEEEEeCCCCCCCCCeEEeccCcc
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDG---------PGAG------KHI-QA--GAKKVIITAPAKGADIPTYVVGVNEK 225 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~---------e~a~------~Hl-~a--GakkVIISAPsk~~DiP~iV~GVN~~ 225 (329)
..|++.+. +.|+||.+.|.-+.. +.++ ..+ +. .++-+++|.|. |+-+.+. ....
T Consensus 81 t~d~~~~~----daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~-~k~s 152 (330)
T 3ldh_A 81 GKDYSVSA----GSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQD-WKLS 152 (330)
T ss_dssp ESSSCSCS----SCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHH-HHHH
T ss_pred cCCHHHhC----CCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHH-HHHh
Confidence 24555543 899999998875421 1111 111 22 34334446664 2211111 0111
Q ss_pred ccCCCCCceEEcCCchhhhhhhHHHhhhhhcCceE
Q 020217 226 DYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVK 260 (329)
Q Consensus 226 ~~~~~~~~IISnASCTTn~LaPvlKvL~d~fGI~~ 260 (329)
.|.+ .++|. +||+-=-+.+-..|-+++|+..
T Consensus 153 g~p~--~rViG--~gt~LDs~R~~~~lA~~lgv~~ 183 (330)
T 3ldh_A 153 GLPM--HRIIG--SGCNLDSARFRYLMGERLGVHS 183 (330)
T ss_dssp CCCG--GGEEC--CTTHHHHHHHHHHHHHHHTSCT
T ss_pred CCCH--HHeec--ccCchhHHHHHHHHHHHhCCCH
Confidence 2333 46664 5776555777788888888753
No 286
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=63.68 E-value=7.2 Score=35.79 Aligned_cols=32 Identities=31% Similarity=0.287 Sum_probs=24.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|++||+|+|.|.||..++..|. .. .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g---~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY---HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC---CceEEEEC
Confidence 4579999999999999998887 42 46665643
No 287
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=63.68 E-value=14 Score=35.05 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=27.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
|..||+|+|-|.-|-..++.|..+ .++++|+.|.+.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~-~~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNL-MPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHH-CTTCEEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHhcc-CcCCeEEEEcCC
Confidence 445899999999999888887643 346898888763
No 288
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=63.49 E-value=6.1 Score=35.78 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||+|+|.|.+|..+++.|.+.. .+|+.++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g---~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG---NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEEc
Confidence 48999999999999999887642 47666653
No 289
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=63.35 E-value=6.1 Score=39.05 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||+|+|.|.+|..+++.|.+.. .+|++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G---~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG---FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999988653 46666653
No 290
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=63.35 E-value=6.2 Score=39.49 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+++|+|+|+|.+|..+++.|.+.. .+|++.+-
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G---~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999998753 57776654
No 291
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=63.30 E-value=4.9 Score=35.22 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=25.6
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|+++|.|-| .|.||+.+++.|.++ ..+|+++.
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~ 36 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE---EYDIYPFD 36 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT---TEEEEEEC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC---CCEEEEec
Confidence 556899999 899999999998765 35777774
No 292
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=63.06 E-value=7.8 Score=36.95 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|.|+|+||+.+++.+.... .+|++++-
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d~ 199 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG---ATVTVLDI 199 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 468999999999999999987652 57766643
No 293
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=62.31 E-value=6.6 Score=39.21 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=27.4
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.|..+|+|+|.|.+|..+++.|.+.. .+|++.|.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~dr 41 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG---FTVCAYNR 41 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46789999999999999999998753 57776654
No 294
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=62.30 E-value=17 Score=34.41 Aligned_cols=30 Identities=23% Similarity=0.203 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...+.++... .. +|+++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA---GASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEC
Confidence 4799999999999998887654 24 677664
No 295
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=62.20 E-value=6 Score=36.39 Aligned_cols=130 Identities=15% Similarity=0.102 Sum_probs=66.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
-+|.|+|.|.||...+.++.... ..+|+++.. +.+.+..+.++ |. + .+ + ..++
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~--~~~~~~~~~~l----Ga---~-------~~-i--------~~~~ 225 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVS--AARVIAVDL--DDDRLALAREV----GA---D-------AA-V--------KSGA 225 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--CCEEEEEES--CHHHHHHHHHT----TC---S-------EE-E--------ECST
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC--CHHHHHHHHHc----CC---C-------EE-E--------cCCC
Confidence 47999999999998888775441 257777743 23344333221 21 1 00 1 1011
Q ss_pred CCCCCCc--------cCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcC
Q 020217 167 PLQLPWA--------ELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNA 238 (329)
Q Consensus 167 P~~idW~--------~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnA 238 (329)
+|. ..|+|+|||++|.-...+.+-..++.|-+ +++-+...+ . +.-+ +...+... ..++..-
T Consensus 226 ----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~-iv~~G~~~~-~-~~~~---~~~~~~~~-~~i~g~~ 294 (345)
T 3jv7_A 226 ----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVGIHAG-A-HAKV---GFFMIPFG-ASVVTPY 294 (345)
T ss_dssp ----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCTT-C-CEEE---STTTSCTT-CEEECCC
T ss_pred ----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCE-EEEECCCCC-C-CCCc---CHHHHhCC-CEEEEEe
Confidence 221 23899999999975444555555655542 444332211 1 2111 22333222 3444333
Q ss_pred CchhhhhhhHHHhhhh
Q 020217 239 SCTTNCLAPFVKVMDE 254 (329)
Q Consensus 239 SCTTn~LaPvlKvL~d 254 (329)
.-+-..+.-+++.+.+
T Consensus 295 ~~~~~~~~~~~~l~~~ 310 (345)
T 3jv7_A 295 WGTRSELMEVVALARA 310 (345)
T ss_dssp SCCHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHc
Confidence 3334556666666654
No 296
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=62.19 E-value=6.6 Score=38.74 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||+|+|.|.+|..+++.|.+.. .+|++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G---~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 58999999999999999998653 56666653
No 297
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=62.01 E-value=7.4 Score=36.63 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=23.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
.+||+|.|.|.+|..++..|..... . +++.+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~-~-~v~l~ 35 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQL-G-DVVLF 35 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-c-eEEEE
Confidence 3699999999999999988876532 1 65544
No 298
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=61.66 E-value=8.3 Score=33.97 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=25.9
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG---EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 346899999 8999999999998863 46666643
No 299
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=61.66 E-value=7.4 Score=39.15 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|+|.|+|.||+.+++.+.... .+|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G---a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG---ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 58999999999999999987652 5777664
No 300
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=61.47 E-value=6.8 Score=35.85 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=23.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|++||+|+|.|.+|..++..|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG---EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS---CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC---CeEEEEEc
Confidence 4579999999999999999887642 35555543
No 301
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=61.24 E-value=9.7 Score=34.51 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.||+|+|.|.+|..++..|... ..+|+.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~---G~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT---GHTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEE
Confidence 5899999999999999988764 35776664
No 302
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=61.02 E-value=6.8 Score=38.54 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||+|+|+|.+|..+++.|.+.. .+|++.+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G---~~V~v~dr 36 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRG---YTVAIYNR 36 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCC---CEEEEEcC
Confidence 68999999999999999998653 57666653
No 303
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=60.96 E-value=7.9 Score=34.49 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=24.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|+|.|.|.+|+.+++.|.+.. .++.+.+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 8999999999999999998753 36655543
No 304
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=60.71 E-value=26 Score=34.53 Aligned_cols=83 Identities=16% Similarity=0.200 Sum_probs=49.3
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 87 vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
.+|.|+|.|.+|.. ++|.|.++. .+|. +.|.........|-+ . | |+++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~-~~D~~~~~~~~~l~~---------------~-------g--i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG---YQIS-GSDLAPNSVTQHLTA---------------L-------G--AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEE-EECSSCCHHHHHHHH---------------T-------T--CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC---CeEE-EEECCCCHHHHHHHH---------------C-------C--CEEECCC
Confidence 58999999999996 899998874 4544 445422112211210 0 1 1222234
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCC
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGa 201 (329)
++++++ ++|+||-+.|.-.+........+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 455443 68999999998776655555444443
No 305
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=60.61 E-value=17 Score=32.10 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|+|-|..|-.++..|..+ .++++.|..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~---g~~v~vie~ 34 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS---GLSYVILDA 34 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS---SCCEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 36899999999999999988765 367777754
No 306
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=60.24 E-value=7.5 Score=38.53 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+.+|+|+|.|.+|..+++.|.+. ..+|++.|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~---G~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR---GYTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT---TCCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC---CCeEEEEeC
Confidence 46899999999999999999864 357776654
No 307
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=60.00 E-value=9.8 Score=33.77 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=24.9
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCG 33 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEc
Confidence 35899999 8999999999998753 5766664
No 308
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=59.73 E-value=11 Score=31.86 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=25.0
Q ss_pred CeeeEEEEc-CChhHHHHHHHHH-hCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~-~r~~~~l~vVaInd 120 (329)
|+.+|.|-| .|.||+.+++.|. ++. .+|+++..
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTD---MHITLYGR 38 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEec
Confidence 333499999 8999999999998 542 57766643
No 309
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=59.48 E-value=7.3 Score=37.46 Aligned_cols=31 Identities=26% Similarity=0.438 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaInd 120 (329)
.+|+|.|+|.||+.+++.|... ++ +|+++|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~---G~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR---GVRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH---CCSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHC---CCCEEEEEeC
Confidence 5899999999999999998764 25 6776764
No 310
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=59.29 E-value=6.5 Score=36.56 Aligned_cols=30 Identities=27% Similarity=0.248 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|.|.||..+++++.... .+|+++.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~ 210 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG---AETYVIS 210 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 47999999999999988876542 4777765
No 311
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=59.08 E-value=9.6 Score=36.83 Aligned_cols=31 Identities=19% Similarity=0.111 Sum_probs=24.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..+|+|+|+|.||+.+++.+.... .+|++++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D 202 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG---AIVRAFD 202 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 468999999999999999887652 5666554
No 312
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=58.66 E-value=7.9 Score=37.81 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=25.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+.||+|+|+|+||+.+++.+.... .+|++++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 214 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG---AKTTGYD 214 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC---CEEEEEe
Confidence 4569999999999999999987652 4665553
No 313
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=58.25 E-value=9.6 Score=35.32 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.|||++|+|.+|..+++.|.+. ..++++-|-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~---G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA---GYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEeeehHHHHHHHHHHHhC---CCeEEEEcC
Confidence 4899999999999999999875 357776654
No 314
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=58.19 E-value=15 Score=34.08 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|.|.||...++++... ..+++++.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~---Ga~Vi~~~ 220 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT---GAEVIVTS 220 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEe
Confidence 4799999999999998888665 25777774
No 315
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=57.94 E-value=36 Score=29.24 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=25.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|.|+|-|..|-..+..|.++ .++++.|..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~---g~~v~lie~ 34 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK---GVRVGLLTQ 34 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT---TCCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHC---CCCEEEEec
Confidence 35899999999999998888765 357766654
No 316
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=57.88 E-value=9.2 Score=36.96 Aligned_cols=30 Identities=27% Similarity=0.581 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|.|.+|..++..|.+.. .+|+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G---~~V~~~d 30 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG---HEVIGVD 30 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999988753 5777663
No 317
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=57.51 E-value=6.2 Score=35.82 Aligned_cols=24 Identities=29% Similarity=0.329 Sum_probs=19.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
|++||+|+|.|.+|..++..|...
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~ 24 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQS 24 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC
Confidence 457999999999999999888754
No 318
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=57.46 E-value=11 Score=34.18 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=23.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVV 118 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l--~vVaI 118 (329)
+++||+|.|.|.+|..++..|.... . +|+.+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g---~~~~V~l~ 38 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRG---IAREIVLE 38 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC---CCCEEEEE
Confidence 3479999999999999998887642 3 66555
No 319
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=57.37 E-value=8 Score=37.87 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|+|.+|..++..|.+.. ...+|++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g-~G~~V~~~d 37 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC-PEIRVTVVD 37 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 69999999999999999887641 136777774
No 320
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=57.28 E-value=17 Score=32.95 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=23.1
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|.|.|. |.||...++++.... .+++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6999995 999999998886653 46766654
No 321
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=57.19 E-value=11 Score=35.39 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|+|.|.|.+|+.+++++.+. ++++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~---G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM---GYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEeC
Confidence 4899999999999999999865 478888864
No 322
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=57.08 E-value=9.6 Score=35.96 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=24.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++||+|+|.|.+|..++..|.... ..+|..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEe
Confidence 469999999999999998886432 35666664
No 323
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=57.04 E-value=9.7 Score=35.98 Aligned_cols=30 Identities=33% Similarity=0.434 Sum_probs=23.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaI 118 (329)
.+||+|.|.|.+|..++..|.... + +++.+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~---~~~v~L~ 37 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKE---LGDVVLF 37 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 469999999999999988887653 3 65544
No 324
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=56.84 E-value=8.3 Score=32.02 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=24.7
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
|.++|.|.| .|.||+.+++.|.++.. ..+|+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~ 37 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAP 37 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEE
Confidence 446899999 99999999999987631 0155544
No 325
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=56.64 E-value=5.8 Score=36.64 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||..+++++..+. . +|+++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 199 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG---AYPVIVSE 199 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 47999999999999999887652 4 666663
No 326
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=56.40 E-value=12 Score=35.73 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=24.9
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
...+|+|.|+|+||+.+++.+.... .+|++++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d 202 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG---AVVMATD 202 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3468999999999999999887652 5655554
No 327
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=56.37 E-value=12 Score=33.62 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=26.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46899999 8999999999998763 47766654
No 328
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=56.17 E-value=16 Score=33.70 Aligned_cols=30 Identities=33% Similarity=0.306 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...++++... .. +|+++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~ 203 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAM---GAAQVVVTD 203 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEC
Confidence 4799999999999998887654 24 677664
No 329
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=56.13 E-value=13 Score=33.25 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG---HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEec
Confidence 5899999 8999999999998763 47766643
No 330
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=55.94 E-value=5.7 Score=40.08 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=52.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCC-ceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSP-LDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~-l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
+.||.|.|+|-||+.+++.+..+.+-. .+|+.+ |+.+.. ..+++. .|. .+. .+.|..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~--~~~~~~---~g~---~~~------------~~~Vda- 70 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTK--VDVAQQ---YGV---SFK------------LQQITP- 70 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCS--CCHHHH---HTC---EEE------------ECCCCT-
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhh--hhHHhh---cCC---cee------------EEeccc-
Confidence 358999999999999999998763211 255555 431110 111110 010 000 000100
Q ss_pred CC----CCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 020217 165 RD----PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (329)
Q Consensus 165 ~~----P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISA 208 (329)
.+ .+.+ -.+ + |+||.++-.+.+..-+...+++|+ -.|+.
T Consensus 71 dnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDT 113 (480)
T 2ph5_A 71 QNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINA 113 (480)
T ss_dssp TTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEES
T ss_pred hhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEEC
Confidence 10 1111 122 3 999987777777788888899999 55643
No 331
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=55.93 E-value=12 Score=33.63 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=25.4
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|.++|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG---YLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 346899999 8999999999998763 4666663
No 332
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=54.92 E-value=14 Score=32.78 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=24.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|-| .|.||+.+++.|.++. .+++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG---DVELVLR 34 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT---TEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CeEEEEe
Confidence 5899999 8999999999998653 4666553
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=54.88 E-value=14 Score=34.09 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=22.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCce-EEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~-vVaIn 119 (329)
-+|.|+|.|.||...++++.... .+ |+++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG---ACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 47999999999999988876542 44 66553
No 334
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=54.85 E-value=8.3 Score=35.62 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=23.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...++++... .. +|+++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~~ 198 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL---GAGRIFAVG 198 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCcEEEEEC
Confidence 4799999999999998887654 24 676663
No 335
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=54.55 E-value=13 Score=35.00 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=25.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..+|+|.|.|.||+.+++.+.... .+|++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d 196 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG---AQVTILD 196 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 468999999999999999987653 4766664
No 336
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=54.47 E-value=11 Score=34.37 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=26.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+++|.|-| .|.||+.|++.|.++. ..+|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETT--DWEVFGMDM 57 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHS--SCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC--CCEEEEEeC
Confidence 46899999 9999999999998762 357777754
No 337
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=54.36 E-value=10 Score=34.88 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||..+++++..+ .. +|+++.
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~~~ 196 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRAS---GAGPILVSD 196 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEC
Confidence 4799999999999999887664 24 676664
No 338
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=54.32 E-value=20 Score=34.02 Aligned_cols=24 Identities=17% Similarity=0.254 Sum_probs=20.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
..+||+|.|.|.||..++..|..+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~ 41 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMK 41 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC
Confidence 447999999999999888877765
No 339
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=54.28 E-value=11 Score=35.31 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=23.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...+.++.... . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G---a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG---ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 47999999999999888776542 4 677664
No 340
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=54.14 E-value=12 Score=33.76 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=27.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|.|-| .|.||+.+++.|.++. ..++|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSY-ETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHC-TTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 46899999 8999999999998753 3478887764
No 341
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=54.02 E-value=13 Score=36.56 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=24.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
.+.||+|+|+|+||..+++.+.... .+|++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~ 219 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG---AVVSAT 219 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC---CEEEEE
Confidence 4579999999999999999987653 465544
No 342
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=53.99 E-value=17 Score=30.63 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=26.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEEc
Confidence 35899999 9999999999998862 1357766643
No 343
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=53.77 E-value=12 Score=37.11 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|.|+|++|+.+++.|.+. +.++++|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~---g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK---PVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 6899999999999999999875 367777754
No 344
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=53.65 E-value=30 Score=31.84 Aligned_cols=30 Identities=23% Similarity=0.115 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|.|.||...++++.... .+|+++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYG---AFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEc
Confidence 47999999999999998876552 4666664
No 345
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=53.58 E-value=9.4 Score=35.85 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|.|.||...++++.... -.+|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~ 227 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLG--AENVIVIA 227 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--BSEEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcC--CceEEEEc
Confidence 47999999999999998886542 13777765
No 346
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=53.23 E-value=18 Score=35.72 Aligned_cols=34 Identities=29% Similarity=0.340 Sum_probs=27.5
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++.+|.|.|+|++|+.+++.|.+. +.++++|..
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~---~~~vvvid~ 158 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESR---NHLFVVVTD 158 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTT---TCCEEEEES
T ss_pred ccCCeEEEECCChHHHHHHHHHHHC---CCCEEEEEC
Confidence 3456899999999999999998764 368888854
No 347
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=52.97 E-value=13 Score=34.22 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=23.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|.|.+|..++..|.+.. .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g---~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG---EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEE
Confidence 68999999999999999887642 4555554
No 348
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=52.87 E-value=13 Score=34.15 Aligned_cols=43 Identities=16% Similarity=0.256 Sum_probs=31.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL 131 (329)
|||.|-| .|.||+.+++.|.++. .++++++.-..+.+.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHh
Confidence 4799999 9999999999998763 24776664314666655555
No 349
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=52.84 E-value=14 Score=34.37 Aligned_cols=75 Identities=20% Similarity=0.193 Sum_probs=45.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
-.||+|+|.|.+|..+++.|. . .++|++.+- +.+.+..++++ + . +..+ + .+++ ..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a---G~~V~v~d~--~~~~~~~~~~~------l-----~--~~~~--~--~i~~--~~ 66 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S---KHEVVLQDV--SEKALEAAREQ------I-----P--EELL--S--KIEF--TT 66 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T---TSEEEEECS--CHHHHHHHHHH------S-----C--GGGG--G--GEEE--ES
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c---CCEEEEEEC--CHHHHHHHHHH------H-----H--HHHh--C--CeEE--eC
Confidence 368999999999999999987 5 368776653 34444444332 0 0 0000 0 0122 13
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCC
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVD 189 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~ 189 (329)
+++.+ .++|+|||+...-..
T Consensus 67 ~~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 67 TLEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp SCTTG----GGCSEEEECCCSCHH
T ss_pred CHHHH----cCCCEEEEcCcCCHH
Confidence 45433 388999999887554
No 350
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=52.65 E-value=11 Score=35.25 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=50.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEec
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~ 164 (329)
.-+|.|+| .|.||...++++.... ..+|+++.. +.+.+..+.+ .|. +.- ++.+. .+.
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~--~~~~~~~~~~----lGa---d~v--------i~~~~-~~~-- 229 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRT--DLTVIATAS--RPETQEWVKS----LGA---HHV--------IDHSK-PLA-- 229 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECS--SHHHHHHHHH----TTC---SEE--------ECTTS-CHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeC--CHHHHHHHHH----cCC---CEE--------EeCCC-CHH--
Confidence 35799999 9999998888775421 257777743 3344433322 221 111 11100 000
Q ss_pred CCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGa 201 (329)
....++ ...|+|+|||++|.-...+.+-..++.|-
T Consensus 230 ~~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G 264 (363)
T 4dvj_A 230 AEVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQG 264 (363)
T ss_dssp HHHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTC
T ss_pred HHHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCC
Confidence 001111 23489999999996544455556666655
No 351
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=52.47 E-value=16 Score=31.90 Aligned_cols=32 Identities=25% Similarity=0.624 Sum_probs=25.5
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
...+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 43 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKN---VEVIPTD 43 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEEC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCC---CeEEecc
Confidence 346899999 9999999999998652 5777664
No 352
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=52.09 E-value=12 Score=33.84 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|+|.|.|.+|+.+++.|.+.. .+|.++|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g---~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG---AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC---CEEEEEEC
Confidence 58999999999999999998652 46666654
No 353
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=51.73 E-value=45 Score=32.69 Aligned_cols=83 Identities=22% Similarity=0.183 Sum_probs=50.6
Q ss_pred eeeEEEEcCC----hhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEE
Q 020217 86 KLKVAINGFG----RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (329)
Q Consensus 86 ~vkVaInGfG----RIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V 161 (329)
+.+|+|+|.+ ++|+.+++.|.+.. .-+|..||-. ++. +.|. ++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g--~~~v~pVnP~-----------~~~------------------i~G~--~~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK-----------EEE------------------VQGV--KA 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS-----------CSE------------------ETTE--EC
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcC--CCEEEEECCC-----------CCe------------------ECCE--ec
Confidence 5689999965 89999999987642 4577777642 111 1121 12
Q ss_pred EecCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 020217 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (329)
Q Consensus 162 ~~~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVII 206 (329)
+ .+.++++- .+|+++-+++.....+-+...++.|+|.+|+
T Consensus 55 y--~sl~~lp~---~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIPD---EIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCSS---CCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcCC---CCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 22333431 5677777776665556666666677776554
No 354
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=51.41 E-value=35 Score=33.32 Aligned_cols=31 Identities=16% Similarity=0.021 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|+|.|++|...++.|.+.. -+|++|..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g---a~V~vi~~ 43 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG---ARLTVNAL 43 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---BEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEcC
Confidence 58999999999999999998753 35555543
No 355
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=51.16 E-value=12 Score=36.87 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=26.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+++||+|+|.|.+|..++..|.+.. ...+|++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g-~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 3469999999999999999887641 236777774
No 356
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=51.15 E-value=24 Score=37.25 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=73.5
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChh-------hhhhhccccccccccCceEEEecCCeEEECCe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK-------NASHLLKYDSLLGTFKADVKIVDNETISVDGK 157 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~-------~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk 157 (329)
...||+|.|.|.+|.-++-.+... .++|+.+ |. +.+ ++..+|+.....++-... ... ..
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~a---G~~V~l~-D~-~~~~l~~~~~~i~~~l~~~~~~~~~~~~------~~~---~~ 380 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARV---GISVVAV-ES-DPKQLDAAKKIITFTLEKEASRAHQNGQ------ASA---KP 380 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT---TCEEEEE-CS-SHHHHHHHHHHHHHHHHHHHHHHHTTTC------CCC---CC
T ss_pred cccEEEEEcccHHHHHHHHHHHhC---CCchhcc-cc-hHhhhhhHHHHHHHHHHHHHHhccccch------hhh---hh
Confidence 346899999999999999877643 4776544 43 222 222222111111111110 100 01
Q ss_pred EEEEEecCCCCCCCCccCCCcEEEcCCCCCCChh-----hHHHHHHcCCCEEEEeCCC--------CCCCCC---eEEec
Q 020217 158 LIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGP-----GAGKHIQAGAKKVIITAPA--------KGADIP---TYVVG 221 (329)
Q Consensus 158 ~I~V~~~~~P~~idW~~~GiDiVvesTG~f~~~e-----~a~~Hl~aGakkVIISAPs--------k~~DiP---~iV~G 221 (329)
.+.. ..+.+.+ .++|+|||+.-.-.+.+ .+..+...++ ++-|+.| ...+-| ....-
T Consensus 381 ~~~~--~~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HF 452 (742)
T 3zwc_A 381 KLRF--SSSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHF 452 (742)
T ss_dssp CEEE--ESCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEEC
T ss_pred hhcc--cCcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccc
Confidence 1222 2333333 27899999965444432 2234444566 6667654 111223 22344
Q ss_pred cCccccCCCCCceEEcCCchhhhhhhHHHhhhhhcC
Q 020217 222 VNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELG 257 (329)
Q Consensus 222 VN~~~~~~~~~~IISnASCTTn~LaPvlKvL~d~fG 257 (329)
.|+-.+-+- -.||......-..+.-+.... +..|
T Consensus 453 fnP~~~m~L-VEvi~g~~Ts~e~~~~~~~~~-~~lg 486 (742)
T 3zwc_A 453 FSPAHVMRL-LEVIPSRYSSPTTIATVMSLS-KKIG 486 (742)
T ss_dssp CSSTTTCCE-EEEEECSSCCHHHHHHHHHHH-HHTT
T ss_pred cCCCCCCce-EEEecCCCCCHHHHHHHHHHH-HHhC
Confidence 455444332 357776665555555555443 3444
No 357
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=51.12 E-value=22 Score=33.02 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||..+++++.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG---AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 47999999999999988876542 4 666664
No 358
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=50.75 E-value=15 Score=34.23 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=23.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|.|.|.||...++++... .. +|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA---GASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEEc
Confidence 4799999999999998887654 24 566663
No 359
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=50.40 E-value=9.9 Score=35.64 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.4
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
|++||+|+|.|.+|..++..|...
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 446899999999999999988653
No 360
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=50.03 E-value=13 Score=34.67 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=24.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|.| .|.||..+++++.... .+|+++.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~ 215 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD---AHVTAVC 215 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 4799999 8999999998887652 4777765
No 361
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=49.97 E-value=10 Score=33.35 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=24.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.++|.|-| .|.||+.+++.|.++. +..+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~ 35 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLY-GTENVIASD 35 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEc
Confidence 46899999 8999999999998751 124666654
No 362
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=49.97 E-value=16 Score=33.98 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=22.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|.|.|.||...+.++.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG---ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 47999999999998888776442 3 566663
No 363
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=49.27 E-value=16 Score=34.14 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=27.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhh
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASH 129 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ay 129 (329)
..||+|+|.|.+|..++..+... .++|++. |. +.+.+..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~---G~~V~l~-d~-~~~~~~~ 44 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG---GFRVKLY-DI-EPRQITG 44 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT---TCCEEEE-CS-CHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC---CCEEEEE-eC-CHHHHHH
Confidence 35899999999999999988765 3576655 43 4444433
No 364
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=49.14 E-value=15 Score=34.88 Aligned_cols=91 Identities=19% Similarity=0.192 Sum_probs=52.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~ 165 (329)
..||+|.|.|.+|+.+++.|.+. .+|++.+. +.+.+..+.+ .+ +.+.+ ...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~R--~~~~a~~la~------~~-~~~~~----------------d~~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE----FDVYIGDV--NNENLEKVKE------FA-TPLKV----------------DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHTT------TS-EEEEC----------------CTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC----CeEEEEEC--CHHHHHHHHh------hC-CeEEE----------------ecC
Confidence 46999999999999999998754 46554443 3444433321 00 00111 001
Q ss_pred CCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 020217 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (329)
Q Consensus 166 ~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIIS 207 (329)
+++++.=.-.++|+||.+++.....+-+...+++|+ .+++
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD 106 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVD 106 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEE
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEE
Confidence 111110001268999999887665566667788887 4454
No 365
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=49.12 E-value=7.2 Score=37.10 Aligned_cols=23 Identities=30% Similarity=0.333 Sum_probs=20.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r 108 (329)
..+|.|.|.|.+|..++..|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a 140 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS 140 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhC
Confidence 35899999999999999988764
No 366
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=49.10 E-value=8.4 Score=35.33 Aligned_cols=133 Identities=19% Similarity=0.155 Sum_probs=66.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~ 166 (329)
-+|.|+|.|.||...++++.... .+|+++.. +.+.+..+.+ .|. +.. + ..++
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~--~~~~~~~~~~----lGa---~~~--------i--------~~~~ 219 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG---LRVAAVDI--DDAKLNLARR----LGA---EVA--------V--------NARD 219 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT---CEEEEEES--CHHHHHHHHH----TTC---SEE--------E--------ETTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEeC--CHHHHHHHHH----cCC---CEE--------E--------eCCC
Confidence 47999999999999998887652 48877743 2334433322 121 111 1 1111
Q ss_pred CCCCCC---ccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCCCCCceEEcCCchhh
Q 020217 167 PLQLPW---AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (329)
Q Consensus 167 P~~idW---~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAPsk~~DiP~iV~GVN~~~~~~~~~~IISnASCTTn 243 (329)
++-.++ ..-++|+|||++|.-...+.+-..++.|-+ +++-+...+ +.+. -.+ ..+... ..+......+..
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~-iv~~G~~~~-~~~~---~~~-~~~~~~-~~i~g~~~~~~~ 292 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGT-IALNGLPPG-DFGT---PIF-DVVLKG-ITIRGSIVGTRS 292 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCSS-EEEE---EHH-HHHHTT-CEEEECCSCCHH
T ss_pred cCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCE-EEEeCCCCC-CCCC---CHH-HHHhCC-eEEEEEecCCHH
Confidence 110000 012789999999865444555555555442 444332211 1111 111 111122 345554444556
Q ss_pred hhhhHHHhhhh
Q 020217 244 CLAPFVKVMDE 254 (329)
Q Consensus 244 ~LaPvlKvL~d 254 (329)
.+.-+++.+.+
T Consensus 293 ~~~~~~~l~~~ 303 (340)
T 3s2e_A 293 DLQESLDFAAH 303 (340)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 66677777665
No 367
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=49.09 E-value=17 Score=35.88 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.0
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..+||+|+|.|.+|..++..|.+.. .+|++++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d 38 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG---HDVFCLD 38 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC---CEEEEEE
Confidence 3579999999999999999887653 5777774
No 368
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=48.85 E-value=19 Score=31.73 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=24.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||.|-| .|-||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 4799999 8999999999998763 47766643
No 369
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=48.71 E-value=20 Score=35.45 Aligned_cols=45 Identities=20% Similarity=0.190 Sum_probs=33.8
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhc
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLL 131 (329)
+.+|.|.| +|-||..-++++...+ .+++|+++.-..+++.++...
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aL~ag~nv~~L~~q~ 54 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNP-EHFRVVALVAGKNVTRMVEQC 54 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TTEEEEEEEESSCHHHHHHHH
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCC-CccEEEEEEcCCCHHHHHHHH
Confidence 35899999 9999999999887653 358998887654565555433
No 370
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=48.67 E-value=21 Score=35.32 Aligned_cols=44 Identities=20% Similarity=0.285 Sum_probs=33.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC-CCChhhhhhhc
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLL 131 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd-~~d~~~~ayLL 131 (329)
.+|.|.| +|-||..-++++...+ .+++|+++.- ..+++.++...
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aLaa~g~nv~~L~~q~ 67 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNP-DRFEVVGLAAGGAHLDTLLRQR 67 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHhCC-CceEEEEEEecCCCHHHHHHHH
Confidence 6899999 9999999999887653 3589999876 44666555443
No 371
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=48.47 E-value=15 Score=31.97 Aligned_cols=24 Identities=13% Similarity=0.404 Sum_probs=21.1
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r 108 (329)
++++|.|-| .|.||+.+++.|.++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~ 29 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADG 29 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhc
Confidence 346899999 999999999999875
No 372
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=48.41 E-value=19 Score=32.93 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=25.7
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG---YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEEC
Confidence 446899999 8999999999998763 47766643
No 373
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=47.83 E-value=32 Score=32.05 Aligned_cols=88 Identities=15% Similarity=0.062 Sum_probs=51.2
Q ss_pred eeEEEE-cC-ChhHHHHHHHHHhCCCCCceEE-EEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 87 LKVAIN-GF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 87 vkVaIn-Gf-GRIGR~vlR~l~~r~~~~l~vV-aInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
..++|+ |+ |+.|+.+++.+.+.. +++| .||-. .. +.. +.|. +++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G---~~~v~~VnP~----~~---------------------g~~--i~G~--~vy~ 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTPG----KG---------------------GKT--HLGL--PVFN 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT----CT---------------------TCE--ETTE--EEES
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC---CcEEEEeCCC----cC---------------------cce--ECCe--eeec
Confidence 457777 96 999999999887643 4655 44321 00 001 2332 2321
Q ss_pred cCCCCCCCCccCCCcEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 020217 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (329)
Q Consensus 164 ~~~P~~idW~~~GiDiVvesTG~f~~~e~a~~Hl~aGakkVIISAP 209 (329)
+.++++- +.++|+++-+++.....+-+...++.|++.+|+=++
T Consensus 62 --sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~ 104 (305)
T 2fp4_A 62 --TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITE 104 (305)
T ss_dssp --SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred --hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 1222221 126788888888776667777777788887555333
No 374
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=47.78 E-value=37 Score=33.18 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=24.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..||+|+|.|.+|..++..|... ..+|+.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~---G~~V~l~D 67 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV---GISVVAVE 67 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCeEEEEE
Confidence 35899999999999999988754 36776663
No 375
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=47.68 E-value=20 Score=31.86 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|-||+.+++.|.++. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 5899999 8999999999998763 57766643
No 376
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=47.28 E-value=20 Score=32.24 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=25.8
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46899999 8999999999998763 47776643
No 377
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=47.09 E-value=20 Score=32.46 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|-|..|-.++..|..+ .++++.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~---G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH---GIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCCEEEEe
Confidence 6999999999999998888764 36777774
No 378
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=46.96 E-value=21 Score=31.83 Aligned_cols=30 Identities=27% Similarity=0.473 Sum_probs=24.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEe
Confidence 4799999 9999999999998753 5777664
No 379
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=46.92 E-value=13 Score=34.06 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r 108 (329)
++||+|+|.|.+|..++..|...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 36999999999999999988753
No 380
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=46.90 E-value=20 Score=33.65 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|.|-|.+|+.+++++.+. +++++++..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l---G~~viv~d~ 43 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM---GYKVVVLDP 43 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEEC
Confidence 35899999999999999999875 478888843
No 381
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=46.79 E-value=16 Score=33.41 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=24.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
-+|.|.| .|.||...++++..+. .+++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG---AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4799999 8999999999887653 57777754
No 382
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=46.78 E-value=17 Score=34.89 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||+|+|.|.+|..++..|.+ . .+|++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G---~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q---NEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T---SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC-C---CEEEEEE
Confidence 489999999999999998864 3 5777774
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=46.75 E-value=18 Score=34.91 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=27.2
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhh
Q 020217 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (329)
Q Consensus 87 vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayL 130 (329)
-+|.|.|- |.||...+.++... ..++|++.. +.+.+.++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~~--~~~~~~~~ 269 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG---GANPICVVS--SPQKAEIC 269 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEES--SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCeEEEEEC--CHHHHHHH
Confidence 47999995 99999998888665 257776643 34444433
No 384
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=46.28 E-value=18 Score=31.93 Aligned_cols=32 Identities=25% Similarity=0.248 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~R 38 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDG--TFKVRVVTR 38 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--SSEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhcC--CceEEEEEc
Confidence 5899999 8999999999998752 246666643
No 385
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=46.25 E-value=19 Score=33.48 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=22.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...++++.... . +|+++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G---a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG---ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 47999999999998888776442 3 466664
No 386
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=46.10 E-value=22 Score=31.68 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=25.6
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+.++|.|-| .|-||+.+++.|.++. .+|+++..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 46 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVA 46 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeC
Confidence 446899999 9999999999998763 47776654
No 387
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=46.07 E-value=52 Score=31.78 Aligned_cols=85 Identities=27% Similarity=0.324 Sum_probs=50.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCC---hhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d---~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~ 163 (329)
.||.|.|.|..|..+++.|.++. .+|.+. |..+ ......| + +. | |++..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G---~~V~~~-D~~~~~~~~~~~~L-~---------------~~------g--i~~~~ 61 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG---AIVTVN-DGKPFDENPTAQSL-L---------------EE------G--IKVVC 61 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT---CEEEEE-ESSCGGGCHHHHHH-H---------------HT------T--CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEE-eCCcccCChHHHHH-H---------------hC------C--CEEEE
Confidence 58999999999999999998763 455444 4311 1111111 1 00 1 12222
Q ss_pred cCCCCCCCCccCC-CcEEEcCCCCCCChhhHHHHHHcCCC
Q 020217 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAK 202 (329)
Q Consensus 164 ~~~P~~idW~~~G-iDiVvesTG~f~~~e~a~~Hl~aGak 202 (329)
..+|+++ + + + +|+||-+.|.-.+........+.|.+
T Consensus 62 g~~~~~~-~-~-~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 62 GSHPLEL-L-D-EDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp SCCCGGG-G-G-SCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred CCChHHh-h-c-CCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 3334432 1 1 4 79999999997777766666667763
No 388
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=46.01 E-value=22 Score=33.08 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...++++.... . +|+++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG---AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 47999999999999988876542 4 566663
No 389
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=45.59 E-value=23 Score=31.97 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD---QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998763 46766643
No 390
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=45.38 E-value=19 Score=32.85 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=18.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
-+|.|.|.|-+|...+.++...
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~ 183 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVAL 183 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCcchHHHHHHHHc
Confidence 4799999999999888877654
No 391
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=45.28 E-value=23 Score=31.64 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=24.4
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
|.++|.|-| .|-||+.+++.|.++. .+|+++
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~ 39 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG---YAVNTT 39 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEE
Confidence 446899999 9999999999998763 466653
No 392
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=45.15 E-value=24 Score=31.42 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 3789999 8999999999998762 257776644
No 393
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=45.09 E-value=23 Score=32.46 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=25.5
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|+.+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r 60 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG---YEVHGLIR 60 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC---CEEEEEec
Confidence 435899999 8999999999998763 47766643
No 394
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=45.08 E-value=20 Score=33.26 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=22.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
-+|.|+|.|.||...++++... .. +|+++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~---Ga~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVA---GASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEEc
Confidence 4799999999999988877654 24 566663
No 395
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=45.01 E-value=23 Score=32.72 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHH-HHHH-HhCCCCCce-EEEEeC
Q 020217 87 LKVAINGFGRIGRNF-LRCW-HGRKDSPLD-VVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~v-lR~l-~~r~~~~l~-vVaInd 120 (329)
-+|.|+|.|.||... +.++ ... ..+ |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~---Ga~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK---GYENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT---CCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc---CCcEEEEEeC
Confidence 579999999999988 8876 443 245 777754
No 396
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=44.82 E-value=47 Score=31.66 Aligned_cols=23 Identities=30% Similarity=0.491 Sum_probs=18.4
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHh
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHG 107 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~ 107 (329)
.++||+|.| .|.||..++-.|..
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~ 46 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIAR 46 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECcCcHHHHHHHHHHHh
Confidence 458999999 59999988765544
No 397
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=44.81 E-value=24 Score=32.58 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=26.0
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 61 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDW 61 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC---CeEEEEEC
Confidence 346899999 8999999999998763 47766643
No 398
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=44.19 E-value=23 Score=34.67 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 57999999 9999999999998763 47766643
No 399
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=43.83 E-value=25 Score=31.67 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=25.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG---DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 9999999999998763 47766643
No 400
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=43.81 E-value=53 Score=31.32 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=24.8
Q ss_pred CeeeEEEEc-CChhHHHHHHH--HHhCCCCCceEEEEeCC
Q 020217 85 AKLKVAING-FGRIGRNFLRC--WHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~--l~~r~~~~l~vVaInd~ 121 (329)
+..||.|.| .|+.++.++.. +.+| ++.++|+.-++
T Consensus 9 ~~tkviV~G~~Gk~~~~ml~~~~~~~r--~~~~vVagV~P 46 (334)
T 3mwd_B 9 RHTKAIVWGMQTRAVQGMLDFDYVCSR--DEPSVAAMVYP 46 (334)
T ss_dssp TTCCEEEESCCHHHHHHHHHHHHHTTC--SSCSEEEEECT
T ss_pred CCCeEEEECCchHHHHHHHHhcccccC--CCceEEEEEcC
Confidence 346899999 68888877766 3334 34788887665
No 401
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=43.65 E-value=11 Score=32.93 Aligned_cols=31 Identities=13% Similarity=0.184 Sum_probs=24.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+.+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSD 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE---EEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 45899999 8999999999988652 4665553
No 402
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=43.54 E-value=23 Score=34.96 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=27.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhh
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNAS 128 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~a 128 (329)
.+||+|+|.|.+|..++..|.. . .+|++++- +.+.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G---~~V~~~D~--~~~~v~ 72 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-N---HEVVALDI--VQAKVD 72 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-T---SEEEEECS--CHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-C---CeEEEEec--CHHHhh
Confidence 4699999999999999987764 2 68777643 444443
No 403
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=43.07 E-value=20 Score=32.75 Aligned_cols=31 Identities=23% Similarity=0.316 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
+||+|.|.|.+|..++..|..... .-+|+.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~ 32 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFI 32 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEE
Confidence 589999999999999998876531 1255555
No 404
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=43.07 E-value=21 Score=33.31 Aligned_cols=33 Identities=24% Similarity=0.177 Sum_probs=23.9
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEE
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
+++||+|.| .|.||..++..|.++. .--+|+.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g-~~~ev~l~ 40 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNP-LVSVLHLY 40 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCT-TEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC-CCCEEEEE
Confidence 457999999 8999999998887652 11255554
No 405
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=43.03 E-value=24 Score=33.46 Aligned_cols=30 Identities=23% Similarity=0.217 Sum_probs=23.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
++||+|.|.|.+|..++..|.+.. .+|..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G---~~V~l~ 58 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG---QKVRLW 58 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT---CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC---CeEEEE
Confidence 469999999999999999987642 355444
No 406
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=42.82 E-value=27 Score=28.80 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=23.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+||.|-| .|.||+.+++.|. +. .+|+++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEe
Confidence 5799999 9999999999987 53 4666553
No 407
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=42.69 E-value=17 Score=33.60 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=20.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r 108 (329)
..+|+|+|+|.+|+.+++.|.+.
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~ 157 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQ 157 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEEECCcHHHHHHHHHHHHh
Confidence 36899999999999999988753
No 408
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=42.38 E-value=29 Score=32.36 Aligned_cols=30 Identities=7% Similarity=-0.086 Sum_probs=23.7
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|- |.||...++++.... .+++++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 47999995 999999998886652 4777774
No 409
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=41.78 E-value=20 Score=33.26 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=17.6
Q ss_pred eEEEEcCChhHHHHHHHHHhC
Q 020217 88 KVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 88 kVaInGfGRIGR~vlR~l~~r 108 (329)
||+|.|.|.+|..++-.|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~ 21 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR 21 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHhC
Confidence 699999999999888766544
No 410
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=41.58 E-value=22 Score=32.30 Aligned_cols=30 Identities=17% Similarity=0.177 Sum_probs=23.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+| .|.||...+.++.... .+++++.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~ 184 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG---TTVITTA 184 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEe
Confidence 4799997 9999999998886652 4777774
No 411
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=41.47 E-value=29 Score=30.67 Aligned_cols=30 Identities=30% Similarity=0.553 Sum_probs=24.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|+|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLD 31 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 3789999 8999999999998753 4776664
No 412
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=41.44 E-value=27 Score=33.37 Aligned_cols=39 Identities=18% Similarity=0.103 Sum_probs=26.9
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhh
Q 020217 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (329)
Q Consensus 87 vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayL 130 (329)
.+|.|.|- |-||...++++.... .++|++.. +.+.+..+
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~--~~~~~~~~ 261 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVS--SAQKEAAV 261 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEES--SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeC--CHHHHHHH
Confidence 47999995 999999998887652 47666643 34444433
No 413
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=41.34 E-value=34 Score=33.20 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=19.8
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r 108 (329)
.++||+|.| .|.||..++-.|...
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~ 55 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASG 55 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHcC
Confidence 357999999 899999888777654
No 414
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=41.15 E-value=51 Score=34.37 Aligned_cols=56 Identities=21% Similarity=0.115 Sum_probs=34.0
Q ss_pred HHHHHHhhcccccccCCCCccccccCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 60 FFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+..|+..+-..+. .+............||+|+|.|.+|..++..|... .++|+.++
T Consensus 287 ~~aF~~kr~~~~~-~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~a---G~~V~l~D 342 (725)
T 2wtb_A 287 IHVFFSQRGTAKV-PGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILS---NYPVILKE 342 (725)
T ss_dssp HHHHHHHHGGGCC-TTTSSSCCCCCCCCCEEEECCSHHHHHHHHHHHTT---TCCEEEEC
T ss_pred HHHhhhhhhhccc-CCCCccccccccCcEEEEEcCCHhhHHHHHHHHhC---CCEEEEEE
Confidence 5567666554443 11110011122335899999999999999988754 36776664
No 415
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=41.10 E-value=26 Score=31.03 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+.+|+|+|-|.+|-.++..|..+ .++|+.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~---G~~V~vlE~ 33 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA---GHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHHC---CCcEEEEEC
Confidence 45899999999999999888765 367777754
No 416
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=40.79 E-value=24 Score=32.46 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=20.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r 108 (329)
++||+|.|.|.+|..++..|...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~ 26 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD 26 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46899999999999999888764
No 417
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=40.75 E-value=28 Score=31.81 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=25.2
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
...+|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~ 42 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKN---YEVCIVD 42 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEE
Confidence 346899999 9999999999998763 4777764
No 418
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=40.68 E-value=38 Score=31.32 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
-+|.|+|.|.||...+.++.... ..+|+++.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~--Ga~Vi~~~ 218 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMT--PATVIALD 218 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--CCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCeEEEEe
Confidence 47999999999999888776541 24777774
No 419
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=40.36 E-value=34 Score=30.51 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCC---ceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSP---LDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~---l~vVaInd 120 (329)
|||.|-| .|.||+.+++.|.++.... .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 3799999 9999999999998741113 57777643
No 420
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=40.21 E-value=16 Score=33.46 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhh
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNA 127 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ 127 (329)
.+|.|.|+|++|+.+++.|.++ +. +++| |. +++..
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~---g~-v~vi-d~-~~~~~ 150 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS---EV-FVLA-ED-ENVRK 150 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS---CE-EEEE-SC-GGGHH
T ss_pred CCEEEECCcHHHHHHHHHHHhC---Cc-EEEE-eC-Chhhh
Confidence 4799999999999999988765 24 6666 33 44444
No 421
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=40.00 E-value=69 Score=28.72 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=23.4
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|.|+|- |.||...++++.... .+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeC
Confidence 4999995 999999998887652 47777753
No 422
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=39.89 E-value=27 Score=35.17 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
.+|+|.|+|.||+.+++.|.... .+|+++ |.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G---A~Viv~-D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG---ARVIVT-EI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEE-cC
Confidence 57999999999999999997652 566544 54
No 423
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=39.88 E-value=32 Score=30.63 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=25.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.++|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 36 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIAD 36 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEe
Confidence 35899999 9999999999998763 4666664
No 424
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=39.43 E-value=24 Score=30.87 Aligned_cols=29 Identities=14% Similarity=0.399 Sum_probs=23.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
|||.|-| .|.||+.+++.|. +. .+|+++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~ 30 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALD 30 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEec
Confidence 3799999 8999999999987 52 5777664
No 425
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=39.25 E-value=33 Score=30.31 Aligned_cols=32 Identities=16% Similarity=0.348 Sum_probs=25.0
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN---VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 35899999 9999999999998763 47766643
No 426
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=38.88 E-value=25 Score=32.50 Aligned_cols=29 Identities=24% Similarity=0.526 Sum_probs=22.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVV 118 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l--~vVaI 118 (329)
+||+|.|.|.+|..++..|.... + +|+.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g---~~~~V~l~ 31 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG---FAREMVLI 31 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCeEEEE
Confidence 48999999999999998877542 3 55555
No 427
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=38.72 E-value=17 Score=37.90 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=55.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC--CChhhhhh--hccccccccccCceEEEecCCeEEEC-CeEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASH--LLKYDSLLGTFKADVKIVDNETISVD-GKLIKV 161 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~--~d~~~~ay--LLkyDS~hG~F~g~V~v~~~~~L~in-Gk~I~V 161 (329)
.+|.|+|.|.+|-.++..|.... +.-+.|-|. .++..+.. |+.. ..-|+....+-.+ .-..+| +-.|..
T Consensus 18 s~VlVVGaGGLGsevak~La~aG---VG~ItlvD~D~Ve~SNLnRQflf~~-~dVGk~KAeaaa~--~L~~iNP~v~V~a 91 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTG---FSHIDLIDLDTIDVSNLNRQFLFQK-KHVGRSKAQVAKE--SVLQFYPKANIVA 91 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCEEEEEECCBCCGGGGGTCTTCCG-GGTTSBHHHHHHH--HHHTTCTTCEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcC---CCeEEEecCCEEChhhcCCCcCCCh-hHcChHHHHHHHH--HHHHHCCCCeEEE
Confidence 58999999999999999887543 333334443 33333322 2222 2235544332211 000122 223444
Q ss_pred EecC-CCCCCC--CccCCCcEEEcCCCCCCChhhHHHHH-HcCCC
Q 020217 162 VSNR-DPLQLP--WAELGIDIVIEGTGVFVDGPGAGKHI-QAGAK 202 (329)
Q Consensus 162 ~~~~-~P~~id--W~~~GiDiVvesTG~f~~~e~a~~Hl-~aGak 202 (329)
+..+ ...+++ |- .+.|+||+|+..+..+....... +.|..
T Consensus 92 ~~~~i~~~~~~~~~~-~~~DlVvda~Dn~~aR~~ln~~c~~~~iP 135 (640)
T 1y8q_B 92 YHDSIMNPDYNVEFF-RQFILVMNALDNRAARNHVNRMCLAADVP 135 (640)
T ss_dssp EESCTTSTTSCHHHH-TTCSEEEECCSCHHHHHHHHHHHHHHTCC
T ss_pred EecccchhhhhHhhh-cCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 3322 112221 11 37899999998876655544332 34553
No 428
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=38.56 E-value=28 Score=31.92 Aligned_cols=24 Identities=33% Similarity=0.491 Sum_probs=20.6
Q ss_pred CeeeEEEEc-CChhHHHHHHHHHhC
Q 020217 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInG-fGRIGR~vlR~l~~r 108 (329)
+++||.|.| .|.||..+++.|..+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~ 27 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG 27 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC
Confidence 457999999 699999999988765
No 429
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=38.52 E-value=34 Score=30.27 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG---YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998763 47766643
No 430
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=38.35 E-value=32 Score=31.59 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELG--VNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcC--CceEEEEEC
Confidence 5899999 8999999999998763 147776643
No 431
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=38.31 E-value=35 Score=31.68 Aligned_cols=39 Identities=18% Similarity=0.034 Sum_probs=27.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhh
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNA 127 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ 127 (329)
..+|+|.|.|.+|+.+++.|.+.. +++.|.|-+. +.+..
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r-~~~~a 163 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDV-REKAA 163 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECS-SHHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECC-CHHHH
Confidence 468999999999999999887621 2454555554 34443
No 432
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=38.27 E-value=36 Score=33.79 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=25.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
..||+|+|.|.+|..++..+... .++|+.++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a---G~~V~l~D 84 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA---GIETFLVV 84 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCeEEEEE
Confidence 46899999999999999988764 36776664
No 433
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=38.20 E-value=34 Score=30.89 Aligned_cols=31 Identities=16% Similarity=-0.005 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CeEEEEeC
Confidence 5899999 9999999999998763 46666643
No 434
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=37.89 E-value=35 Score=30.45 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=24.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3789999 8999999999998763 4776664
No 435
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=37.64 E-value=28 Score=31.29 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|||.|-| .|-||+.+++.|.++. ..+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~--g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT--QDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC--SCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcC--CCeEEEEec
Confidence 3799999 8999999999998742 357776643
No 436
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=37.51 E-value=33 Score=30.83 Aligned_cols=32 Identities=22% Similarity=0.686 Sum_probs=25.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG---HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 35899999 8999999999998753 47766643
No 437
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=37.34 E-value=26 Score=35.77 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhC---CCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR---KDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r---~~~~l~vVaInd 120 (329)
.||||+|+|.+|..+++.|... ...++++++-.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 4899999999999999988764 111357654333
No 438
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=37.27 E-value=17 Score=33.05 Aligned_cols=30 Identities=7% Similarity=-0.008 Sum_probs=23.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|.|.| .|.||..+++++.... .+++++.
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~ 172 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG---AKLIGTV 172 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 4799999 8999999998876542 4777764
No 439
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=37.01 E-value=34 Score=30.89 Aligned_cols=32 Identities=25% Similarity=0.514 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT--CCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CcEEEEEec
Confidence 5899999 8999999999998763 146666654
No 440
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=36.66 E-value=35 Score=29.74 Aligned_cols=31 Identities=26% Similarity=0.554 Sum_probs=23.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
||.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT--CCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC--CcEEEEEcc
Confidence 578999 8999999999998753 146666654
No 441
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=36.39 E-value=38 Score=29.95 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG---YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 8999999999998763 47766643
No 442
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=36.27 E-value=42 Score=31.41 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=26.3
Q ss_pred eeEEEE--cCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhh
Q 020217 87 LKVAIN--GFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (329)
Q Consensus 87 vkVaIn--GfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayL 130 (329)
-+|.|+ |.|.||...++++.... .+++++.. +.+.+.++
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~~--~~~~~~~~ 212 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDG---IKLVNIVR--KQEQADLL 212 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEES--SHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEEC--CHHHHHHH
Confidence 368898 79999999888776542 47777743 33444433
No 443
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=36.24 E-value=33 Score=30.53 Aligned_cols=33 Identities=27% Similarity=0.613 Sum_probs=25.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+||.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g-~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH-PDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhC-CCCEEEEEec
Confidence 5799999 8999999999998752 2357777643
No 444
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=36.19 E-value=33 Score=34.74 Aligned_cols=45 Identities=24% Similarity=0.287 Sum_probs=32.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCC--CCCceEEEEeCCCChhhhhhh
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGRK--DSPLDVVVVNDSGGVKNASHL 130 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r~--~~~l~vVaInd~~d~~~~ayL 130 (329)
+.+|.|.| +|-||..-++++...+ ..+++|+++.-..+++.++..
T Consensus 77 mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ 124 (488)
T 3au8_A 77 PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQ 124 (488)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHH
Confidence 36899999 9999999999886521 135888888654455555443
No 445
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=36.04 E-value=47 Score=30.30 Aligned_cols=30 Identities=7% Similarity=-0.082 Sum_probs=23.7
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGf-GRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|.|.|. |.||..+++++..+. .+++++.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~ 198 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG---ARVIATA 198 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEe
Confidence 47999995 999999999887652 4777664
No 446
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=35.96 E-value=34 Score=34.08 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=25.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaIn 119 (329)
.+||+|+|.|.+|..++..|.+. +.. +|++++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~--~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA--PCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS--TTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHh--CCCCeEEEEE
Confidence 36999999999999999988765 135 777764
No 447
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=35.72 E-value=30 Score=30.61 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=23.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|-||+.+++.|.++. .+|++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN----EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS----CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CEEEEEc
Confidence 4799999 8999999999998652 5555543
No 448
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=35.57 E-value=38 Score=30.73 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=25.7
Q ss_pred eeeEEEEc-CChhHHHHHHHHHh--CCCCCceEEEEeC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHG--RKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~--r~~~~l~vVaInd 120 (329)
.++|.|-| .|-||+.+++.|.+ + ..+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~---g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHP---KAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCT---TSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCC---CCeEEEEEC
Confidence 35899998 99999999999987 4 357777644
No 449
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=35.33 E-value=32 Score=32.58 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=26.1
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|+.+|.|+|-|..|-.++..|..+ .++|+.|.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~---G~~V~viE~ 53 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQH---DVDVTVYTD 53 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHT---TCEEEEEES
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC---CCeEEEEcC
Confidence 4667999999999999999888765 368877865
No 450
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=35.26 E-value=39 Score=31.74 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=25.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+.+|.|.|.|.+|+.+++.+.... .+|++++-
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr 198 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG---AQVQIFDI 198 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 368999999999999999987653 47666654
No 451
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=35.11 E-value=35 Score=28.79 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=23.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|-| .|-||+.+++.|.++. ...+|+++.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G-~~~~V~~~~ 51 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG-LFSKVTLIG 51 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC-CCCEEEEEE
Confidence 4799999 9999999999998753 101666554
No 452
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=35.02 E-value=48 Score=28.44 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=26.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|+.+|+|+|-|..|-..+..|.++. ++++.|..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR---KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC---CCEEEEeC
Confidence 4479999999999999998887653 57777754
No 453
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=34.90 E-value=41 Score=30.33 Aligned_cols=30 Identities=17% Similarity=0.186 Sum_probs=24.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 32 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIK 32 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEE
Confidence 4789999 8999999999998763 4776664
No 454
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=34.60 E-value=45 Score=28.11 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 88 kVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~ 32 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG---HTVIGID 32 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC---CEEEEEe
Confidence 688999 8999999999998763 4666654
No 455
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=34.39 E-value=42 Score=30.80 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l-~vVaInd 120 (329)
.+|.|.|.|.+||.+++.|.+.. . +|+++|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G---~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA---AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 58999999999999999998652 4 6666664
No 456
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=34.03 E-value=34 Score=30.58 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 5899999 9999999999998752 1357776643
No 457
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=33.81 E-value=41 Score=29.50 Aligned_cols=34 Identities=15% Similarity=0.107 Sum_probs=26.9
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.++.+|+|+|-|..|-..+..|.++ .++++.|..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~vie~ 53 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA---EIKPILYEG 53 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT---TCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEec
Confidence 4668999999999999999888765 357766755
No 458
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=33.67 E-value=43 Score=30.72 Aligned_cols=22 Identities=27% Similarity=0.304 Sum_probs=19.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
+||+|.|.|.+|..++..|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~ 22 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR 22 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 4899999999999999888764
No 459
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=33.42 E-value=41 Score=30.42 Aligned_cols=30 Identities=27% Similarity=0.382 Sum_probs=22.8
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInGf-GRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|.|.|- |.||...++++..+. .+++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 6999995 999999988876542 46666654
No 460
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=33.30 E-value=53 Score=29.61 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=27.5
Q ss_pred cCeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 84 ~~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+..+|+|+|-|.+|-..+..|.++ .++|+.|..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~---G~~V~llE~ 48 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE---NKNTALFES 48 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC---CCcEEEEeC
Confidence 3557999999999999999888775 367777755
No 461
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=33.20 E-value=1.3e+02 Score=28.21 Aligned_cols=73 Identities=21% Similarity=0.228 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCce-EEEEeCCCChhhhhhhccccccccccCceEEEe--cCCeEEECCeEEEEEec
Q 020217 88 KVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVNDSGGVKNASHLLKYDSLLGTFKADVKIV--DNETISVDGKLIKVVSN 164 (329)
Q Consensus 88 kVaInGfGRIGR~vlR~l~~r~~~~l~-vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~--~~~~L~inGk~I~V~~~ 164 (329)
+|+|+|-|.+|-.++..|..... + |..+.....+ |+..-+. ....|+-. +++.+.+.+....+
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~---~~V~l~~r~~~~------l~~~~i~--~~~~v~~~~~~~~~v~~~dG~~~~--- 279 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAK---HPIYQSLLGGGD------IQNESLQ--QVPEITKFDPTTREIYLKGGKVLS--- 279 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSC---SSEEEECTTCCS------CBCSSEE--EECCEEEEETTTTEEEETTTEEEC---
T ss_pred EEEEEccCcCHHHHHHHHHHHhC---CcEEEEeCCCCc------CCCCCeE--EecCeEEEecCCCEEEECCCCEec---
Q ss_pred CCCCCCCCccCCCcEEEcCCC
Q 020217 165 RDPLQLPWAELGIDIVIEGTG 185 (329)
Q Consensus 165 ~~P~~idW~~~GiDiVvesTG 185 (329)
.+|.||.|||
T Consensus 280 -----------~~D~vi~atG 289 (447)
T 2gv8_A 280 -----------NIDRVIYCTG 289 (447)
T ss_dssp -----------CCSEEEECCC
T ss_pred -----------cCCEEEECCC
No 462
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=33.15 E-value=41 Score=31.18 Aligned_cols=23 Identities=35% Similarity=0.288 Sum_probs=19.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r 108 (329)
++||+|.|.|.||..++-.|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~ 29 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR 29 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 47999999999999888877765
No 463
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=33.04 E-value=51 Score=29.77 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=26.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|..+|+|+|-|-+|-..+..|.++ .++|+.|..
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~---G~~V~vie~ 34 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQ---GVKTLLVDA 34 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeC
Confidence 457999999999999999888775 367777754
No 464
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=33.04 E-value=47 Score=29.17 Aligned_cols=29 Identities=17% Similarity=0.269 Sum_probs=23.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEE
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
.+|.|-| .|.||+.+++.|.++. .+|+++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~ 31 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG---YSVNTT 31 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCC---CEEEEE
Confidence 3689999 9999999999998763 476654
No 465
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=32.88 E-value=46 Score=30.38 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHH-hCCCCCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~-~r~~~~l~vVaInd 120 (329)
|+|.|-| .|.||+.+++.|. ++. .+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEec
Confidence 4899999 8999999999998 753 47776643
No 466
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=32.52 E-value=42 Score=31.65 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=23.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
.||+|+|.|.+|+-++-.+... .++|+.. |+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~---G~~V~l~-D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG---GFRVKLY-DI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEE-CS
T ss_pred CeEEEECCcHHHHHHHHHHHhC---CCeEEEE-EC
Confidence 5899999999999999877654 3675544 54
No 467
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=32.30 E-value=1.4e+02 Score=28.67 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCCCChhhhhhhccccccccccCceEEEecCCeEEECCeEEEEEecCCC
Q 020217 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDP 167 (329)
Q Consensus 88 kVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~~d~~~~ayLLkyDS~hG~F~g~V~v~~~~~L~inGk~I~V~~~~~P 167 (329)
+|+|+|-|.+|-.++..|.... .++-++.-++. ++.+. |...|++. ..--.+.+..+.+ .+-
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g-~~V~li~~~~~--------~~~~~-----~~~~V~~~-~~V~~i~~~~V~~---~dG 260 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYG-AKKLISCYRTA--------PMGYK-----WPENWDER-PNLVRVDTENAYF---ADG 260 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CSEEEEECSSC--------CCCCC-----CCTTEEEC-SCEEEECSSEEEE---TTS
T ss_pred EEEEEcCCCCHHHHHHHHHHhC-CeEEEEEECCC--------CCCCC-----CCCceEEc-CCeEEEeCCEEEE---CCC
Q ss_pred CCCCCccCCCcEEEcCCC
Q 020217 168 LQLPWAELGIDIVIEGTG 185 (329)
Q Consensus 168 ~~idW~~~GiDiVvesTG 185 (329)
..+ .+|.||.|||
T Consensus 261 ~~i-----~~D~Vi~atG 273 (464)
T 2xve_A 261 SSE-----KVDAIILCTG 273 (464)
T ss_dssp CEE-----ECSEEEECCC
T ss_pred CEE-----eCCEEEECCC
No 468
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=32.27 E-value=53 Score=30.23 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=26.9
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+++||.|.|-|.+|+.+++++.+. .++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~---G~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRL---GVEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEEC
Confidence 457999999999999999998764 368777754
No 469
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=32.01 E-value=26 Score=30.38 Aligned_cols=32 Identities=13% Similarity=0.355 Sum_probs=24.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|.|-| .|.||+.+++.|.++. +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKV-PASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEEc
Confidence 688999 8999999999998651 1356666643
No 470
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=31.96 E-value=39 Score=33.48 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.||+|+|.|.+|..++..|... .++|+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a---G~~V~l~D 35 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH---GHQVLLYD 35 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEE
Confidence 4899999999999999988765 35766653
No 471
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=31.82 E-value=47 Score=32.62 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=26.8
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..++|+|+|.|.+|..++..|.+.. .+|++++-
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G---~~V~~~D~ 39 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFG---HEVVCVDK 39 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4589999999999999999988753 57777753
No 472
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=31.79 E-value=55 Score=28.02 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|+|.|--||.+++.|... ..+++++=|
T Consensus 13 k~v~IiGAGg~g~~v~~~l~~~---~~~~vgfiD 43 (220)
T 4ea9_A 13 GGVVIIGGGGHAKVVIESLRAC---GETVAAIVD 43 (220)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEEC
T ss_pred CCEEEEcCCHHHHHHHHHHHhC---CCEEEEEEe
Confidence 4799999999999999998762 467777755
No 473
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=31.77 E-value=32 Score=30.92 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCC--CCceEEEEeC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKD--SPLDVVVVND 120 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~--~~l~vVaInd 120 (329)
++|.|-| .|.||+.+++.|.++.. ...+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 4799999 99999999999876520 0056766643
No 474
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=31.72 E-value=42 Score=31.58 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=20.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r 108 (329)
.+||+|.|.|.||..++..|..+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~ 27 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ 27 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46999999999999999888765
No 475
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=31.48 E-value=35 Score=29.47 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=23.8
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 88 kVaInG-fGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+|.|-| .|.||+.+++.|.++. +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTV-PASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhC-CCceEEEEEc
Confidence 478999 8999999999998651 1356666643
No 476
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=31.37 E-value=43 Score=30.10 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|+|-|-+|-.++..|.++ .++|+.|..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~---G~~V~vle~ 33 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA---GLNVLMTDA 33 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCeEEEEec
Confidence 46899999999999999888775 367777754
No 477
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=31.07 E-value=47 Score=32.44 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
.+|.|.|.|.||+.+++.|.+. ..+|++++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~---G~~V~v~~R 34 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS---GIKVTVACR 34 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT---TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC---cCEEEEEEC
Confidence 4799999999999999999864 256555543
No 478
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=30.89 E-value=48 Score=29.55 Aligned_cols=32 Identities=9% Similarity=0.153 Sum_probs=25.6
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
|++||+|.|-| .|+.+++++.++ +++++++..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~---G~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDE---GFETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHT---TCCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhC---CCEEEEEEC
Confidence 45799999999 999999998775 367777743
No 479
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=30.25 E-value=43 Score=28.65 Aligned_cols=29 Identities=24% Similarity=0.464 Sum_probs=22.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
++|.|-| .|.||+.+++.|.+ . .+|+++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~ 30 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVY 30 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEec
Confidence 3789999 89999999999874 2 4666553
No 480
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=30.19 E-value=59 Score=30.68 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=27.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
+.+||.|.|-|.+|+.+++++.++ .++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~---G~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRL---GVEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEEC
Confidence 446899999999999999999865 368877764
No 481
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=30.16 E-value=53 Score=30.30 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=26.3
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
++++|+|+|-|..|-.++..|..+ .++|+.+..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~---G~~V~v~E~ 54 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS---GIDCDVYEA 54 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCCEEEEeC
Confidence 457999999999999999988765 367777754
No 482
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=30.04 E-value=1.7e+02 Score=28.39 Aligned_cols=31 Identities=13% Similarity=0.204 Sum_probs=23.8
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEeCC
Q 020217 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 87 vkVaInGfGRIGR~-vlR~l~~r~~~~l~vVaInd~ 121 (329)
.+|.|+|.|.+|.. +++.|.++. .+|. +.|.
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~-~~D~ 51 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEG---YQIS-GSDL 51 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCC---CeEE-EECC
Confidence 57999999999997 889998763 4544 4454
No 483
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.03 E-value=47 Score=27.90 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=23.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.+|.|-| .|-||+.+++.|.++. .+|+++.
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G---~~V~~~~ 33 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG---YRVVVLD 33 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC---CEEEEEc
Confidence 4688999 9999999999998753 4665553
No 484
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=29.54 E-value=67 Score=29.25 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=23.3
Q ss_pred eeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 87 LKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 87 vkVaInGfG-RIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
-+|.|.|-| .||...++++.... .+++++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN---FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeC
Confidence 479999965 99999988876542 47777643
No 485
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=29.52 E-value=61 Score=29.69 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=23.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
+||+|.|.|.+|..++..|.... ...+|+.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~-~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQ-LARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCEEEEE
Confidence 48999999999999998887642 12455555
No 486
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=29.46 E-value=37 Score=31.70 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=24.7
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~ 121 (329)
+++||+|.|.|.+|..++..|..... ++ |.+-|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~--~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDL--GD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--CE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--Ce-EEEEEC
Confidence 44699999999999999988876531 26 444454
No 487
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=29.41 E-value=34 Score=30.52 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=19.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 020217 87 LKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r 108 (329)
.+|.|.|.|.+|..+++.|...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~ 53 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA 53 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEEeeCHHHHHHHHHHHHc
Confidence 5899999999999999998764
No 488
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=29.32 E-value=46 Score=31.54 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+.||+|.|-|..||.+++++.+. .++++++.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l---G~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL---NIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 46899999999999999998765 37888886
No 489
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=29.18 E-value=51 Score=30.53 Aligned_cols=24 Identities=25% Similarity=0.360 Sum_probs=20.3
Q ss_pred CeeeEEEEcC-ChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGF-GRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGf-GRIGR~vlR~l~~r 108 (329)
+++||+|.|- |.||..++..|..+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~ 28 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG 28 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC
Confidence 3579999995 99999999888764
No 490
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=28.90 E-value=34 Score=31.98 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC
Q 020217 87 LKVAING-FGRIGRNFLRCWHGR 108 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r 108 (329)
+||+|.| .|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 4899999 999999999888654
No 491
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=28.52 E-value=38 Score=25.07 Aligned_cols=30 Identities=27% Similarity=0.637 Sum_probs=21.3
Q ss_pred ceEEEecCCeEEECCeEEEEEecCCCCCCCCc
Q 020217 142 ADVKIVDNETISVDGKLIKVVSNRDPLQLPWA 173 (329)
Q Consensus 142 g~V~v~~~~~L~inGk~I~V~~~~~P~~idW~ 173 (329)
|++.++++..|.||||.|.... |.-+-+|.
T Consensus 11 gtidieddtsltingkeisyvh--davknkws 40 (73)
T 2jv8_A 11 GTIDIEDDTSLTINGKEISYVH--DAVKNKWS 40 (73)
T ss_dssp EEEEEETTEEEEETTEECCCCC--CSSSCCCC
T ss_pred CeeeeccCceeEECCEEeehHH--HHHhcccc
Confidence 6788877788999999887644 44444554
No 492
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=28.51 E-value=48 Score=29.58 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=23.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEE
Q 020217 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (329)
Q Consensus 87 vkVaInG-fGRIGR~vlR~l~~r~~~~l~vVaI 118 (329)
.+|.|-| .|-||+.+++.|.++. .+|+++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~ 35 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG---YTVRAT 35 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC---CEEEEE
Confidence 5799999 9999999999998763 466653
No 493
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=28.43 E-value=1.5e+02 Score=26.07 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEeCC--CChhhhhhhccccccccccCceEEEecCC----eEEE----CCe
Q 020217 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNE----TISV----DGK 157 (329)
Q Consensus 88 kVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd~--~d~~~~ayLLkyDS~hG~F~g~V~v~~~~----~L~i----nGk 157 (329)
+|+|+|-|.+|-.++..|..+. .++.++.-.+. .+.+....|++..-+.=.+...+.-..++ .+.+ +|+
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~ 232 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKFA-DEVTVIHRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGE 232 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTTC-SEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCC
T ss_pred EEEEECCCHHHHHHHHHHHhcC-CEEEEEeCCCcCCcchHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCc
Q ss_pred EEEEEecCCCCCCCCccCCCcEEEcCCC
Q 020217 158 LIKVVSNRDPLQLPWAELGIDIVIEGTG 185 (329)
Q Consensus 158 ~I~V~~~~~P~~idW~~~GiDiVvesTG 185 (329)
...+ .+|.||-++|
T Consensus 233 ~~~i--------------~~D~vi~a~G 246 (325)
T 2q7v_A 233 VSEL--------------ATDGVFIFIG 246 (325)
T ss_dssp EEEE--------------ECSEEEECSC
T ss_pred EEEE--------------EcCEEEEccC
No 494
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=28.11 E-value=72 Score=28.80 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEeC
Q 020217 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (329)
Q Consensus 86 ~vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaInd 120 (329)
..+|+|+|-|-+|-.++..|.++ .++|+.|..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~---G~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK---GYSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhC---CCEEEEEec
Confidence 36899999999999999888765 368888864
No 495
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=27.35 E-value=48 Score=29.56 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhC
Q 020217 86 KLKVAING-FGRIGRNFLRCWHGR 108 (329)
Q Consensus 86 ~vkVaInG-fGRIGR~vlR~l~~r 108 (329)
.++|.|-| .|-||+.+++.|.++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~ 37 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKD 37 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhc
Confidence 46899999 999999999999875
No 496
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=27.30 E-value=61 Score=31.05 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 87 vkVaInGfGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
.||+|.|-|.+||.+++++.+. .++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l---G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM---GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999998765 37888774
No 497
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=27.25 E-value=49 Score=27.12 Aligned_cols=27 Identities=33% Similarity=0.681 Sum_probs=21.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEe
Q 020217 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (329)
Q Consensus 88 kVaInG-fGRIGR~vlR~l~~r~~~~l~vVaIn 119 (329)
+|.|-| .|.||+.+++.|.++ +|+++.
T Consensus 2 ~vlVtGasg~iG~~la~~l~~~-----~V~~~~ 29 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALKGH-----DLLLSG 29 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTTTS-----EEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC-----CEEEEE
Confidence 578899 999999999988753 666553
No 498
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=27.07 E-value=41 Score=31.17 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=20.1
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
+++||+|.|.|.||..++..|..+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~ 28 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ 28 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC
Confidence 347999999999999988877654
No 499
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=27.06 E-value=41 Score=31.06 Aligned_cols=24 Identities=17% Similarity=0.369 Sum_probs=20.2
Q ss_pred CeeeEEEEcCChhHHHHHHHHHhC
Q 020217 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (329)
Q Consensus 85 ~~vkVaInGfGRIGR~vlR~l~~r 108 (329)
+++||+|.|.|.||..++..|...
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~ 28 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQ 28 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC
Confidence 446999999999999988877654
No 500
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=26.89 E-value=60 Score=29.24 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=24.4
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEeC
Q 020217 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (329)
Q Consensus 88 kVaInGfGRIGR~vlR~l~~r~~~~l-~vVaInd 120 (329)
+|+|.|.|.+||.+++.|.+.. . +|.++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G---~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG---VKDIWVVNR 140 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT---CCCEEEEES
T ss_pred eEEEECcHHHHHHHHHHHHHcC---CCEEEEEeC
Confidence 8999999999999999998753 3 5555665
Done!