BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020219
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1
Length = 226
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 48 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 107
+ FDLD+ LYP S I I + +KLGI + E L + Y++YG + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 108 GYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRL 164
++ D DY V LP E +K D VLR +LL L + IFTNA VHA +VL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 165 GLEDCFEGI 173
G+EDCF+GI
Sbjct: 127 GIEDCFDGI 135
>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1
Length = 280
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 58/239 (24%)
Query: 48 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 107
FD+D+ LY S+ I Q+I + L + L N YK YG + GL +
Sbjct: 58 FFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VM 116
Query: 108 GYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSL----PLRKI-IFTNADKVHAVKVL 161
+ + +Y+ V LP ++ LKPD LR++LL L + K+ +FTNA K HA++ L
Sbjct: 117 FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL 176
Query: 162 SRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQ 221
LG+ D F+G + + + + + T
Sbjct: 177 RLLGIADLFDG---------------------LTYCDYSRTDT----------------- 198
Query: 222 PNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVL 279
+ CKP A EKA+K + + + F +DS +NI+ G ++G+ T +
Sbjct: 199 ------------LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1
Length = 321
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
Query: 47 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA 106
FD+D+TLY S+ + Q++ ++ +LG + + E L Y+ YG ++ GL
Sbjct: 54 VFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIK 113
Query: 107 IGYDFDYDDYHSFVHGRLPYEN-LKPDPVLRSLLLSLPLRKI-------IFTNADKVHAV 158
D Y++F+ LP ++ LKPD LR LL++L +K+ +FTN+ K HA+
Sbjct: 114 NKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAI 173
Query: 159 KVLSRLGLEDCFEGI 173
+ + LG+ D F+GI
Sbjct: 174 RCVKILGIADLFDGI 188
>sp|P65070|Y3433_MYCBO Uncharacterized protein Mb3433 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb3433 PE=4 SV=1
Length = 262
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 201 ASTTTSANGPQIFDIIG--HFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTL 258
A ++SAN + G F Q V L + IA KP+ + +A ++ + P
Sbjct: 152 AVVSSSANTRDVLATTGLDRFVQQRVDGVTLREEHIAGKPAPDSFLRAAELLGVTPDAAA 211
Query: 259 FFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308
FED++ + AG R G V++G ++ + A A H + +L E
Sbjct: 212 VFEDALSGVAAG-RAGNFAVVVGINRTGRAAQAAQLRRHGADVVVTDLAE 260
>sp|P65069|Y3400_MYCTU Uncharacterized protein Rv3400/MT3508 OS=Mycobacterium tuberculosis
GN=Rv3400 PE=4 SV=1
Length = 262
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 201 ASTTTSANGPQIFDIIG--HFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTL 258
A ++SAN + G F Q V L + IA KP+ + +A ++ + P
Sbjct: 152 AVVSSSANTRDVLATTGLDRFVQQRVDGVTLREEHIAGKPAPDSFLRAAELLGVTPDAAA 211
Query: 259 FFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308
FED++ + AG R G V++G ++ + A A H + +L E
Sbjct: 212 VFEDALSGVAAG-RAGNFAVVVGINRTGRAAQAAQLRRHGADVVVTDLAE 260
>sp|Q88QS2|GPH_PSEPK Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440)
GN=PP_0416 PE=3 SV=1
Length = 272
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESI 296
KP A+ +++A + PQ++LF DS ++QA K G+ V G Y +
Sbjct: 157 KPDPAALLFVMQMAGVTPQQSLFVGDSRSDVQAAKAAGVQCV---------GLTYGYNHG 207
Query: 297 HNIKEAIPELWESDMKSEVGYPGQVAVETSVT 328
I P L D+++ + PG T +T
Sbjct: 208 RPIDAESPSLVIDDLRALL--PGCADPATGIT 237
>sp|B7GL49|PPAX_ANOFW Pyrophosphatase PpaX OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=ppaX PE=3 SV=1
Length = 215
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADY 291
KP IEKAL P+ TL D+ +I AGK G T G + +KG ++
Sbjct: 137 AKPHPEPIEKALACLQAKPEETLMVGDNHHDILAGKHAGTKTA--GVAWTIKGREH 190
>sp|O67359|GPH_AQUAE Phosphoglycolate phosphatase OS=Aquifex aeolicus (strain VF5)
GN=gph PE=1 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279
KPS + K L+I P++ L D+ +I+AGKR G T L
Sbjct: 137 KPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTAL 179
>sp|Q58832|Y1437_METJA Uncharacterized HAD-hydrolase MJ1437 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1437 PE=3 SV=1
Length = 228
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 48 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAI 107
+LFDLDDTLY S + A + +K + L I+ + ++ N + K+ G+
Sbjct: 5 ILFDLDDTLYNSSEFVEIARREAVKSMIDAGLNIDFEEAMNILNKIIKDKGSN------- 57
Query: 108 GYDFDYDDYHSFVHGR----------LPYEN-----LKPDP-VLRSL--LLSLPLRKIIF 149
Y +DD V G+ + Y N L+P P +++L L ++ L+ +
Sbjct: 58 -YGKHFDDLVKAVLGKYDPKIITTGIITYHNVKVALLRPYPHTIKTLMELKAMGLKLGVI 116
Query: 150 TNADKVHAVKVLSRLGLEDCFEGIICFE 177
T+ + + L RLG+ F+ +I E
Sbjct: 117 TDGLTIKQWEKLIRLGIHPFFDDVITSE 144
>sp|Q5UP25|KITH_MIMIV Thymidine kinase OS=Acanthamoeba polyphaga mimivirus GN=TK PE=3
SV=1
Length = 225
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 67/172 (38%), Gaps = 47/172 (27%)
Query: 81 IERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDD-YHSFVHGRLPYENLKPDPVLRSLL 139
IER KI L+ KNY R I YD D +D YH H + Y N
Sbjct: 22 IERKKIAGKKCLIIKNY-------RDIRYDSDDNDKYHVTTHNNIIYRNCD--------- 65
Query: 140 LSLPLRKIIFT-NADKVHAVKVLSR----LGLEDCF--EGIICFETLNPTHKNTVSDDED 192
I+FT N +K + +G+E+ F EG V+D +
Sbjct: 66 -------IMFTDNLNKTSLIDTFQEKYDVIGIEEGFFFEG--------------VTDFSN 104
Query: 193 DIAF--VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA 242
++A +E ST S+ +IF IG + ++ L + CK S+ +
Sbjct: 105 ELANRGMEVIISTLESSYKQEIFSEIGKLIAISEDVIKLKAICMGCKISDAS 156
>sp|P42509|GPH_PSEPU Probable phosphoglycolate phosphatase (Fragment) OS=Pseudomonas
putida GN=gph PE=3 SV=1
Length = 251
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESI 296
KP A+ +++A + PQ++LF DS ++ A K G+ V G Y +
Sbjct: 136 KPDPAALLFVMQMAGVTPQQSLFVGDSRSDVLAAKAAGVQCV---------GLTYGYNHG 186
Query: 297 HNIKEAIPELWESDMKS 313
I + P L D+++
Sbjct: 187 RPIHDETPSLVIDDLRA 203
>sp|Q9K6Y7|PPAX_BACHD Pyrophosphatase PpaX OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=ppaX PE=3
SV=1
Length = 215
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYA 292
KP+ +EKA+ + T+ D+ +I GK G+ T ++G + ++G DY
Sbjct: 137 VKPNPEPLEKAMNALGAKKEETIMVGDNSHDILGGKNAGVKTAVVGYA--IRGEDYV 191
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280
KP + L+ +P T+FF+D+ NI+ ++G+ ++L+
Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280
KP + L+ +P T+FF+D+ NI+ ++G+ ++L+
Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>sp|O59346|Y1655_PYRHO Uncharacterized HAD-hydrolase PH1655 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH1655 PE=1 SV=1
Length = 241
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLI--GK-SQR----VKG 288
KP +KALK ++ P+ L D + +I KRVG+ TV GK S+R K
Sbjct: 150 KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKY 209
Query: 289 ADYAFESIHNIKEAIPELWESDMKSEVGYPGQ 320
ADY +++ ++ E + ES +V P Q
Sbjct: 210 ADYEIDNLESLLEVLAR--ESSSNKKVHPPRQ 239
>sp|A7MPD7|ACEK_CROS8 Isocitrate dehydrogenase kinase/phosphatase OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=aceK PE=3 SV=1
Length = 596
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 12/68 (17%)
Query: 52 LDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDL-------GNLLYKNYGTTMAGL 104
++ + P + + A GQ ++D +E+ G + I L G++L+KN+G T G
Sbjct: 416 IERRMVPLNIWLEQATGQQLRD-AIEEYG---NAIRQLAAANIFPGDMLFKNFGVTRHG- 470
Query: 105 RAIGYDFD 112
R + YD+D
Sbjct: 471 RVVFYDYD 478
>sp|A9VQ75|PPAX_BACWK Pyrophosphatase PpaX OS=Bacillus weihenstephanensis (strain KBAB4)
GN=ppaX PE=3 SV=1
Length = 215
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADY 291
KP ++KAL++ P+ TL D+ +I G+ G TV + S +KG Y
Sbjct: 137 VKPHPEPLQKALELLDAKPEETLMVGDNHHDIVGGQNAGTKTVAV--SWTLKGRAY 190
>sp|C0R5A2|DEF_WOLWR Peptide deformylase OS=Wolbachia sp. subsp. Drosophila simulans
(strain wRi) GN=def PE=3 SV=1
Length = 179
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 233 PIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYA 292
PI P E I +A ++ IN + D + + +GL V +G +R+ D
Sbjct: 5 PIVIAPDERLITRASEVTDINDKIKELVNDMFETMYDAEGLGLAAVQVGVLKRIFVVDVQ 64
Query: 293 FESIHN 298
E+I N
Sbjct: 65 LETIEN 70
>sp|Q4FPT7|GPH_PSYA2 Phosphoglycolate phosphatase OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=Psyc_2124 PE=3 SV=1
Length = 230
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESI 296
KP + ++ +INP + + DS+ +I AG+ +DT+ G Y +
Sbjct: 150 KPDPAPLLHVCEVLNINPAQAVMIGDSINDILAGQNANMDTL---------GLSYGYNYG 200
Query: 297 HNIKEAIPELWESDMKSEVGY 317
+I++ P D + V Y
Sbjct: 201 QDIRQLNPTEAFDDFSALVDY 221
>sp|Q73IJ6|DEF_WOLPM Peptide deformylase OS=Wolbachia pipientis wMel GN=def PE=3 SV=1
Length = 179
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 233 PIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYA 292
PI P E I +A ++ IN + D + + +GL V +G +R+ D
Sbjct: 5 PIVIAPDERLITRASEVTDINDKIKELVNDMFETMYDAEGLGLAAVQVGVLKRIFVMDIQ 64
Query: 293 FESIHN 298
E+I N
Sbjct: 65 LETIEN 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,761,257
Number of Sequences: 539616
Number of extensions: 5228219
Number of successful extensions: 13950
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13926
Number of HSP's gapped (non-prelim): 39
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)