Query 020219
Match_columns 329
No_of_seqs 116 out of 1121
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 07:59:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020219.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020219hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 3.2E-30 6.9E-35 226.7 18.9 221 43-311 13-235 (244)
2 TIGR01993 Pyr-5-nucltdase pyri 99.9 2.8E-25 6E-30 195.0 20.2 184 46-280 1-184 (184)
3 PRK13288 pyrophosphatase PpaX; 99.9 5.9E-25 1.3E-29 197.3 19.1 199 44-305 2-212 (214)
4 PLN02770 haloacid dehalogenase 99.9 1.2E-24 2.5E-29 200.5 18.1 199 42-300 19-232 (248)
5 COG0546 Gph Predicted phosphat 99.9 1.5E-24 3.2E-29 196.4 18.2 199 43-304 2-218 (220)
6 PRK13478 phosphonoacetaldehyde 99.9 3.7E-24 8.1E-29 199.0 19.9 208 42-314 1-265 (267)
7 TIGR03351 PhnX-like phosphonat 99.9 6E-24 1.3E-28 191.3 19.9 196 45-303 1-219 (220)
8 PRK13226 phosphoglycolate phos 99.9 2.7E-24 5.9E-29 195.6 17.4 196 44-303 11-224 (229)
9 PRK10826 2-deoxyglucose-6-phos 99.9 4E-24 8.8E-29 193.1 16.8 196 43-302 5-218 (222)
10 TIGR01422 phosphonatase phosph 99.9 8.1E-24 1.8E-28 194.9 18.8 195 45-303 2-252 (253)
11 PRK10563 6-phosphogluconate ph 99.9 2.8E-24 6E-29 193.8 15.2 197 43-302 2-211 (221)
12 TIGR02253 CTE7 HAD superfamily 99.9 1.2E-23 2.5E-28 189.2 18.3 198 45-299 2-220 (221)
13 TIGR01449 PGP_bact 2-phosphogl 99.9 1.8E-23 4E-28 186.8 17.7 191 48-302 1-212 (213)
14 PLN03243 haloacid dehalogenase 99.9 2.8E-23 6.1E-28 192.8 18.9 206 42-310 21-241 (260)
15 PRK11587 putative phosphatase; 99.9 2.8E-23 6E-28 187.4 18.0 191 44-300 2-204 (218)
16 PRK14988 GMP/IMP nucleotidase; 99.9 7.8E-23 1.7E-27 185.7 20.2 202 44-307 9-222 (224)
17 TIGR01454 AHBA_synth_RP 3-amin 99.9 5.3E-23 1.2E-27 183.5 18.2 193 48-304 1-204 (205)
18 PRK13222 phosphoglycolate phos 99.9 1E-22 2.3E-27 183.3 20.2 202 41-306 2-224 (226)
19 PLN02575 haloacid dehalogenase 99.9 8.5E-23 1.8E-27 197.5 20.6 207 43-313 129-351 (381)
20 TIGR02254 YjjG/YfnB HAD superf 99.9 1.9E-22 4.1E-27 181.2 20.0 199 45-303 1-224 (224)
21 PRK09449 dUMP phosphatase; Pro 99.9 2.3E-22 5E-27 181.5 20.4 123 128-304 93-223 (224)
22 PRK13225 phosphoglycolate phos 99.9 4E-22 8.8E-27 186.3 20.6 198 43-308 60-272 (273)
23 PRK13223 phosphoglycolate phos 99.9 2.3E-22 5.1E-27 187.7 17.6 199 44-305 12-231 (272)
24 COG0637 Predicted phosphatase/ 99.9 1.4E-22 3.1E-27 183.8 14.7 196 44-303 1-216 (221)
25 PRK10725 fructose-1-P/6-phosph 99.9 2.1E-22 4.6E-27 176.7 14.4 173 44-281 4-186 (188)
26 COG1011 Predicted hydrolase (H 99.9 1.4E-21 3.1E-26 176.1 19.7 124 128-305 97-228 (229)
27 PLN02940 riboflavin kinase 99.9 3.2E-22 7E-27 195.2 16.1 196 43-302 9-219 (382)
28 PRK10748 flavin mononucleotide 99.9 1.5E-21 3.3E-26 178.6 18.1 199 43-303 8-238 (238)
29 PRK06698 bifunctional 5'-methy 99.9 3.2E-21 6.8E-26 192.6 18.1 203 42-306 238-456 (459)
30 TIGR01428 HAD_type_II 2-haloal 99.9 4.8E-21 1E-25 169.8 17.1 104 127-284 89-195 (198)
31 PLN02779 haloacid dehalogenase 99.9 8.6E-21 1.9E-25 178.5 17.8 198 43-302 38-271 (286)
32 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 1.1E-20 2.3E-25 165.1 16.1 170 45-280 1-185 (185)
33 TIGR01990 bPGM beta-phosphoglu 99.9 5.2E-21 1.1E-25 167.1 13.3 169 47-281 1-185 (185)
34 TIGR02252 DREG-2 REG-2-like, H 99.9 2.7E-20 5.7E-25 165.5 17.8 173 46-279 1-203 (203)
35 PF13419 HAD_2: Haloacid dehal 99.8 1.8E-21 4E-26 166.3 6.9 168 48-280 1-176 (176)
36 PHA02597 30.2 hypothetical pro 99.8 7.4E-20 1.6E-24 162.2 13.1 181 44-301 1-196 (197)
37 TIGR01509 HAD-SF-IA-v3 haloaci 99.8 2.1E-20 4.7E-25 162.4 9.4 97 129-280 84-183 (183)
38 TIGR02247 HAD-1A3-hyp Epoxide 99.8 1.2E-19 2.6E-24 162.4 14.1 101 128-282 92-197 (211)
39 TIGR00338 serB phosphoserine p 99.8 4.1E-19 9E-24 159.7 15.1 200 40-302 9-218 (219)
40 PLN02919 haloacid dehalogenase 99.8 3.2E-19 7E-24 193.2 16.7 194 43-300 73-286 (1057)
41 PRK09456 ?-D-glucose-1-phospha 99.8 1.9E-18 4.2E-23 153.6 17.1 119 107-283 65-187 (199)
42 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 7E-19 1.5E-23 152.7 10.5 89 127-273 87-175 (175)
43 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 6.2E-18 1.3E-22 150.1 16.0 88 131-273 107-197 (197)
44 PLN02811 hydrolase 99.8 3.3E-18 7.2E-23 154.6 12.2 185 52-300 1-207 (220)
45 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 1.2E-17 2.6E-22 142.0 13.4 151 47-274 1-154 (154)
46 PRK08942 D,D-heptose 1,7-bisph 99.7 4.3E-17 9.4E-22 143.0 14.7 125 129-304 28-177 (181)
47 PLN02954 phosphoserine phospha 99.7 2.5E-16 5.4E-21 142.1 18.3 200 44-303 11-223 (224)
48 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 1.7E-16 3.8E-21 140.1 16.0 113 128-284 78-193 (201)
49 PRK11133 serB phosphoserine ph 99.7 2.1E-16 4.6E-21 150.9 16.6 123 128-294 179-304 (322)
50 PRK06769 hypothetical protein; 99.7 7.4E-17 1.6E-21 140.9 12.3 121 129-303 27-171 (173)
51 PRK13582 thrH phosphoserine ph 99.7 1.4E-16 3E-21 141.7 13.9 193 45-309 1-201 (205)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.7 1.5E-16 3.1E-21 139.2 13.3 127 129-300 25-175 (176)
53 KOG2914 Predicted haloacid-hal 99.7 2.9E-16 6.3E-21 141.7 14.2 195 43-299 8-218 (222)
54 KOG3085 Predicted hydrolase (H 99.7 2.5E-16 5.5E-21 142.9 12.9 181 43-284 5-216 (237)
55 PRK09552 mtnX 2-hydroxy-3-keto 99.7 6.7E-16 1.5E-20 139.5 15.4 130 127-309 71-218 (219)
56 TIGR01656 Histidinol-ppas hist 99.7 1.1E-16 2.5E-21 135.9 8.5 48 236-283 100-147 (147)
57 TIGR01691 enolase-ppase 2,3-di 99.7 6.6E-15 1.4E-19 133.4 17.6 102 127-284 92-199 (220)
58 PF06888 Put_Phosphatase: Puta 99.6 8.4E-15 1.8E-19 133.5 17.0 207 47-306 2-233 (234)
59 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 2.7E-15 5.8E-20 124.7 11.5 95 130-282 25-132 (132)
60 TIGR01685 MDP-1 magnesium-depe 99.6 3.7E-16 8.1E-21 136.5 6.6 103 127-283 42-159 (174)
61 TIGR02137 HSK-PSP phosphoserin 99.6 7.2E-15 1.6E-19 131.7 13.8 193 46-306 2-198 (203)
62 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 2.3E-14 5E-19 125.0 16.3 122 112-276 60-184 (188)
63 TIGR01261 hisB_Nterm histidino 99.6 3.1E-15 6.8E-20 129.3 9.0 100 129-284 28-150 (161)
64 COG0560 SerB Phosphoserine pho 99.6 2E-14 4.4E-19 129.6 12.9 193 44-295 4-201 (212)
65 TIGR01672 AphA HAD superfamily 99.6 4.6E-14 1E-18 129.2 13.9 97 127-284 111-214 (237)
66 cd01427 HAD_like Haloacid deha 99.6 1.9E-14 4.2E-19 117.2 9.8 116 127-280 21-139 (139)
67 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.5 1.4E-14 3E-19 134.3 9.3 68 236-303 178-254 (257)
68 TIGR03333 salvage_mtnX 2-hydro 99.5 1.1E-13 2.4E-18 124.6 13.2 128 128-308 68-213 (214)
69 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 2.9E-13 6.3E-18 124.9 15.5 64 236-299 177-249 (249)
70 TIGR01664 DNA-3'-Pase DNA 3'-p 99.5 3.9E-14 8.4E-19 123.1 9.0 93 131-279 43-160 (166)
71 PRK10444 UMP phosphatase; Prov 99.5 5.6E-13 1.2E-17 123.0 17.1 64 236-299 173-245 (248)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 6.1E-13 1.3E-17 118.0 16.6 110 129-281 86-198 (202)
73 TIGR02726 phenyl_P_delta pheny 99.5 3.3E-14 7.1E-19 123.8 5.6 97 136-295 43-140 (169)
74 TIGR01452 PGP_euk phosphoglyco 99.5 1.8E-12 3.8E-17 121.5 17.0 64 236-299 201-279 (279)
75 PLN02645 phosphoglycolate phos 99.5 2.5E-12 5.4E-17 122.5 18.2 69 236-304 229-308 (311)
76 TIGR01670 YrbI-phosphatas 3-de 99.5 6.9E-14 1.5E-18 119.9 6.0 112 136-310 37-152 (154)
77 COG0647 NagD Predicted sugar p 99.5 3.3E-12 7.1E-17 118.6 16.7 71 236-306 189-268 (269)
78 TIGR01488 HAD-SF-IB Haloacid D 99.4 9.6E-13 2.1E-17 113.9 11.8 105 127-273 70-177 (177)
79 PRK05446 imidazole glycerol-ph 99.4 1.9E-12 4E-17 124.9 13.4 116 128-303 28-161 (354)
80 PRK09484 3-deoxy-D-manno-octul 99.4 3.3E-13 7.1E-18 118.9 7.6 107 138-308 59-173 (183)
81 TIGR01668 YqeG_hyp_ppase HAD s 99.4 2.6E-12 5.6E-17 111.9 12.0 92 131-285 44-140 (170)
82 PRK01158 phosphoglycolate phos 99.4 5.5E-13 1.2E-17 120.6 7.7 72 236-307 155-229 (230)
83 KOG3120 Predicted haloacid deh 99.4 4.3E-12 9.3E-17 112.5 12.8 220 44-312 12-252 (256)
84 PRK10530 pyridoxal phosphate ( 99.4 3E-12 6.4E-17 118.6 12.0 72 236-307 197-271 (272)
85 TIGR01681 HAD-SF-IIIC HAD-supe 99.4 8.9E-13 1.9E-17 109.6 7.6 85 130-272 29-126 (128)
86 PRK11009 aphA acid phosphatase 99.4 6.3E-12 1.4E-16 115.1 12.7 109 113-285 98-215 (237)
87 PF00702 Hydrolase: haloacid d 99.4 1.5E-12 3.2E-17 115.6 7.8 88 128-274 125-215 (215)
88 PHA02530 pseT polynucleotide k 99.3 1.4E-11 3.1E-16 116.1 13.0 109 129-284 186-299 (300)
89 TIGR01456 CECR5 HAD-superfamil 99.3 1.4E-10 3E-15 111.0 19.5 68 236-303 232-320 (321)
90 PF13242 Hydrolase_like: HAD-h 99.3 7.7E-12 1.7E-16 94.2 8.0 64 236-299 3-75 (75)
91 PRK10513 sugar phosphate phosp 99.3 6.4E-12 1.4E-16 116.5 8.2 72 236-307 194-268 (270)
92 TIGR01482 SPP-subfamily Sucros 99.3 3.8E-12 8.2E-17 114.6 6.1 63 236-298 147-210 (225)
93 COG0561 Cof Predicted hydrolas 99.3 7.5E-11 1.6E-15 109.2 13.6 73 236-308 187-262 (264)
94 PRK11590 hypothetical protein; 99.3 8.5E-11 1.8E-15 105.7 13.2 106 129-281 94-203 (211)
95 PRK10976 putative hydrolase; P 99.2 3.2E-11 6.9E-16 111.7 9.7 72 236-307 188-264 (266)
96 COG2179 Predicted hydrolase of 99.2 8.8E-11 1.9E-15 100.2 10.1 81 139-282 58-139 (175)
97 PRK00192 mannosyl-3-phosphogly 99.2 2.4E-10 5.2E-15 106.6 14.1 71 238-308 190-271 (273)
98 PRK15126 thiamin pyrimidine py 99.2 3.4E-11 7.3E-16 112.1 7.7 73 236-308 186-263 (272)
99 KOG2882 p-Nitrophenyl phosphat 99.2 2.5E-10 5.4E-15 105.9 12.6 68 236-303 223-303 (306)
100 TIGR01460 HAD-SF-IIA Haloacid 99.2 4E-10 8.7E-15 103.2 13.6 48 236-283 187-236 (236)
101 TIGR01487 SPP-like sucrose-pho 99.1 4.3E-11 9.3E-16 107.5 5.0 60 236-295 145-205 (215)
102 KOG1615 Phosphoserine phosphat 99.1 5.5E-10 1.2E-14 97.5 11.2 102 127-272 85-191 (227)
103 smart00577 CPDc catalytic doma 99.1 5.5E-11 1.2E-15 101.2 4.6 93 128-277 43-138 (148)
104 COG0241 HisB Histidinol phosph 99.1 2E-09 4.4E-14 94.2 14.1 67 236-302 104-175 (181)
105 KOG3040 Predicted sugar phosph 99.1 2.6E-10 5.7E-15 100.5 8.2 69 236-304 180-257 (262)
106 TIGR01686 FkbH FkbH-like domai 99.1 3.2E-10 6.9E-15 108.4 9.6 87 131-276 32-125 (320)
107 TIGR01544 HAD-SF-IE haloacid d 99.1 2.4E-09 5.2E-14 99.9 13.9 119 108-273 103-230 (277)
108 PLN02887 hydrolase family prot 99.1 1.2E-09 2.7E-14 111.7 12.7 72 236-307 505-579 (580)
109 TIGR01663 PNK-3'Pase polynucle 99.0 1.2E-09 2.7E-14 110.3 11.3 89 131-275 198-305 (526)
110 TIGR02463 MPGP_rel mannosyl-3- 99.0 8.9E-10 1.9E-14 99.2 8.5 44 236-279 177-220 (221)
111 TIGR02244 HAD-IG-Ncltidse HAD 99.0 6.8E-09 1.5E-13 99.7 14.7 121 128-282 182-324 (343)
112 PRK03669 mannosyl-3-phosphogly 99.0 1.5E-09 3.2E-14 101.2 10.0 73 236-308 185-269 (271)
113 COG1778 Low specificity phosph 99.0 1.6E-10 3.6E-15 97.6 3.1 97 136-295 44-141 (170)
114 PRK08238 hypothetical protein; 99.0 8.3E-09 1.8E-13 103.6 14.3 96 128-284 70-168 (479)
115 TIGR00099 Cof-subfamily Cof su 98.9 2.3E-09 5.1E-14 98.7 7.6 62 236-297 186-248 (256)
116 TIGR01545 YfhB_g-proteo haloac 98.9 6.6E-08 1.4E-12 87.1 14.9 106 129-281 93-202 (210)
117 PF12689 Acid_PPase: Acid Phos 98.9 1.9E-09 4.1E-14 93.7 4.0 98 127-283 42-153 (169)
118 COG4229 Predicted enolase-phos 98.8 6.7E-08 1.5E-12 83.7 13.3 195 44-297 3-224 (229)
119 PTZ00445 p36-lilke protein; Pr 98.8 1.8E-08 3.8E-13 89.9 10.0 48 236-283 156-207 (219)
120 PF08282 Hydrolase_3: haloacid 98.8 2.7E-09 5.9E-14 96.2 3.4 63 236-298 184-247 (254)
121 PRK14502 bifunctional mannosyl 98.8 2.7E-08 5.9E-13 102.3 9.5 48 236-283 611-660 (694)
122 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.7 9.8E-08 2.1E-12 87.5 11.8 85 132-275 26-116 (242)
123 TIGR02471 sucr_syn_bact_C sucr 98.7 5.7E-08 1.2E-12 88.5 10.2 70 236-305 157-233 (236)
124 PF12710 HAD: haloacid dehalog 98.7 6.3E-08 1.4E-12 84.5 9.9 95 133-271 92-192 (192)
125 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.7 9.3E-09 2E-13 94.3 4.7 47 236-282 194-242 (242)
126 TIGR01485 SPP_plant-cyano sucr 98.7 2.6E-07 5.7E-12 85.0 13.7 48 236-283 165-212 (249)
127 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 2.1E-07 4.6E-12 85.9 12.8 71 236-306 174-255 (256)
128 TIGR01533 lipo_e_P4 5'-nucleot 98.7 2.3E-07 5E-12 86.4 12.0 95 111-270 103-204 (266)
129 COG4359 Uncharacterized conser 98.7 5.4E-07 1.2E-11 78.3 12.8 153 113-311 61-219 (220)
130 TIGR01512 ATPase-IB2_Cd heavy 98.5 3.9E-07 8.5E-12 93.1 8.8 112 128-304 360-479 (536)
131 TIGR01525 ATPase-IB_hvy heavy 98.4 5.5E-07 1.2E-11 92.4 8.6 111 128-304 382-500 (556)
132 PF09419 PGP_phosphatase: Mito 98.4 2.5E-06 5.5E-11 74.1 10.4 45 237-283 116-166 (168)
133 PF08645 PNK3P: Polynucleotide 98.4 6.5E-07 1.4E-11 77.2 6.7 42 236-277 96-152 (159)
134 PF06941 NT5C: 5' nucleotidase 98.4 8.7E-07 1.9E-11 78.4 7.4 47 258-304 139-186 (191)
135 TIGR01511 ATPase-IB1_Cu copper 98.3 2.4E-06 5.1E-11 87.9 9.7 110 128-304 403-519 (562)
136 TIGR02461 osmo_MPG_phos mannos 98.3 1.2E-06 2.6E-11 79.7 5.6 43 236-278 179-223 (225)
137 TIGR02251 HIF-SF_euk Dullard-l 98.2 1E-06 2.2E-11 76.2 3.3 96 129-281 41-139 (162)
138 PRK12702 mannosyl-3-phosphogly 98.2 3.2E-06 6.9E-11 79.4 6.5 43 237-279 207-251 (302)
139 PLN02423 phosphomannomutase 98.2 4.3E-05 9.3E-10 70.4 13.9 54 236-307 187-244 (245)
140 TIGR01522 ATPase-IIA2_Ca golgi 98.2 7.6E-06 1.6E-10 88.4 10.2 138 130-305 528-672 (884)
141 TIGR01684 viral_ppase viral ph 98.1 2.1E-05 4.5E-10 73.9 10.8 111 133-267 149-264 (301)
142 COG4087 Soluble P-type ATPase 98.1 1.7E-05 3.7E-10 65.5 8.6 115 128-305 28-148 (152)
143 PTZ00174 phosphomannomutase; P 98.1 5.4E-05 1.2E-09 69.7 13.0 41 236-280 186-230 (247)
144 TIGR00685 T6PP trehalose-phosp 98.1 1.3E-05 2.8E-10 73.6 8.8 71 237-307 166-243 (244)
145 PF05116 S6PP: Sucrose-6F-phos 98.1 1.9E-05 4E-10 72.9 9.1 47 236-283 163-209 (247)
146 PF05761 5_nucleotid: 5' nucle 98.0 5.9E-05 1.3E-09 75.2 12.9 123 130-282 183-325 (448)
147 COG4996 Predicted phosphatase 98.0 3.8E-06 8.3E-11 69.2 3.6 49 127-175 38-89 (164)
148 PRK10671 copA copper exporting 98.0 2E-05 4.2E-10 84.8 9.8 111 129-304 649-765 (834)
149 PLN02177 glycerol-3-phosphate 97.9 0.00031 6.7E-09 71.1 14.7 100 131-281 111-215 (497)
150 TIGR01116 ATPase-IIA1_Ca sarco 97.7 0.00011 2.4E-09 79.7 9.7 137 130-305 537-684 (917)
151 PRK10187 trehalose-6-phosphate 97.7 0.00015 3.3E-09 67.6 8.9 73 236-311 172-248 (266)
152 PHA03398 viral phosphatase sup 97.7 0.00032 7E-09 66.0 10.9 111 133-267 151-266 (303)
153 TIGR01675 plant-AP plant acid 97.7 0.00063 1.4E-08 62.1 11.7 59 112-175 106-170 (229)
154 TIGR01484 HAD-SF-IIB HAD-super 97.6 8.2E-05 1.8E-09 65.9 4.5 44 236-279 161-204 (204)
155 PRK11033 zntA zinc/cadmium/mer 97.5 0.00057 1.2E-08 72.6 10.2 108 129-303 567-680 (741)
156 PRK14010 potassium-transportin 97.4 0.00079 1.7E-08 70.5 10.0 110 130-305 441-557 (673)
157 PF11019 DUF2608: Protein of u 97.4 0.0087 1.9E-07 55.5 15.7 52 236-287 160-215 (252)
158 KOG2630 Enolase-phosphatase E- 97.4 0.0021 4.6E-08 58.0 10.7 48 236-283 179-226 (254)
159 COG5663 Uncharacterized conser 97.4 0.00032 7E-09 60.3 5.2 59 246-308 129-191 (194)
160 PF03767 Acid_phosphat_B: HAD 97.3 0.00053 1.1E-08 62.7 6.5 40 129-168 114-159 (229)
161 TIGR01497 kdpB K+-transporting 97.3 0.00083 1.8E-08 70.4 8.7 110 130-304 446-561 (675)
162 TIGR01680 Veg_Stor_Prot vegeta 97.3 0.0022 4.8E-08 59.8 10.5 47 127-174 142-194 (275)
163 COG2503 Predicted secreted aci 97.3 0.0021 4.6E-08 58.5 9.7 56 110-169 106-168 (274)
164 COG4030 Uncharacterized protei 97.2 0.0078 1.7E-07 54.5 13.0 165 128-305 81-263 (315)
165 TIGR01524 ATPase-IIIB_Mg magne 97.2 0.0012 2.7E-08 71.3 9.5 135 130-305 515-656 (867)
166 PRK10517 magnesium-transportin 97.2 0.0012 2.7E-08 71.5 9.0 135 130-305 550-691 (902)
167 PRK01122 potassium-transportin 97.1 0.0021 4.6E-08 67.4 9.7 110 130-305 445-561 (679)
168 PRK15122 magnesium-transportin 97.1 0.0022 4.7E-08 69.7 9.9 135 130-305 550-691 (903)
169 TIGR01523 ATPase-IID_K-Na pota 97.1 0.0018 3.9E-08 71.3 9.3 138 130-305 646-800 (1053)
170 PF13344 Hydrolase_6: Haloacid 97.1 0.0041 8.8E-08 49.4 8.9 44 133-176 17-66 (101)
171 TIGR01517 ATPase-IIB_Ca plasma 97.1 0.0018 3.9E-08 70.7 9.0 137 130-304 579-722 (941)
172 PLN02382 probable sucrose-phos 97.1 0.0018 3.9E-08 64.2 8.0 76 236-311 173-264 (413)
173 PF03031 NIF: NLI interacting 97.0 0.0001 2.2E-09 62.9 -1.0 49 129-177 35-86 (159)
174 COG2217 ZntA Cation transport 97.0 0.0022 4.8E-08 67.5 8.5 110 129-303 536-651 (713)
175 smart00775 LNS2 LNS2 domain. T 97.0 0.011 2.5E-07 50.7 11.5 38 239-276 103-141 (157)
176 COG0474 MgtA Cation transport 96.9 0.0047 1E-07 67.2 9.8 139 129-305 546-693 (917)
177 TIGR01647 ATPase-IIIA_H plasma 96.9 0.0025 5.4E-08 68.0 7.4 140 130-305 442-588 (755)
178 PRK14501 putative bifunctional 96.8 0.0032 7E-08 66.8 8.0 70 236-307 655-724 (726)
179 COG3700 AphA Acid phosphatase 96.8 0.0051 1.1E-07 53.7 7.2 34 244-281 178-211 (237)
180 TIGR01106 ATPase-IIC_X-K sodiu 96.7 0.0059 1.3E-07 67.1 9.1 140 130-305 568-738 (997)
181 KOG0202 Ca2+ transporting ATPa 96.5 0.0047 1E-07 64.9 6.3 143 129-305 583-732 (972)
182 PLN02645 phosphoglycolate phos 96.2 0.027 5.8E-07 53.7 9.0 86 131-279 45-136 (311)
183 PLN02580 trehalose-phosphatase 96.1 0.024 5.3E-07 55.6 8.7 71 237-308 300-378 (384)
184 TIGR02250 FCP1_euk FCP1-like p 96.1 0.011 2.3E-07 50.8 5.6 50 128-177 56-109 (156)
185 PLN02205 alpha,alpha-trehalose 96.0 0.021 4.5E-07 61.7 8.0 73 236-308 760-846 (854)
186 PLN02499 glycerol-3-phosphate 96.0 0.13 2.9E-06 51.8 13.1 34 133-167 99-133 (498)
187 KOG0207 Cation transport ATPas 96.0 0.039 8.5E-07 58.7 9.6 109 131-304 724-838 (951)
188 TIGR01652 ATPase-Plipid phosph 95.8 0.017 3.7E-07 63.9 6.5 50 254-303 768-819 (1057)
189 TIGR02245 HAD_IIID1 HAD-superf 95.4 0.066 1.4E-06 47.8 7.6 37 131-167 46-84 (195)
190 TIGR01657 P-ATPase-V P-type AT 95.3 0.11 2.4E-06 57.5 10.7 69 236-305 783-853 (1054)
191 COG3769 Predicted hydrolase (H 95.2 0.073 1.6E-06 48.2 7.2 39 241-279 194-234 (274)
192 KOG2469 IMP-GMP specific 5'-nu 95.1 0.53 1.1E-05 46.2 13.3 118 135-283 206-335 (424)
193 TIGR01494 ATPase_P-type ATPase 95.0 0.12 2.5E-06 52.5 9.2 103 129-303 346-453 (499)
194 KOG1618 Predicted phosphatase 94.7 0.98 2.1E-05 43.1 13.5 49 235-283 269-342 (389)
195 PF05152 DUF705: Protein of un 94.7 0.27 5.8E-06 46.1 9.7 39 139-177 154-192 (297)
196 COG5610 Predicted hydrolase (H 94.6 0.07 1.5E-06 52.9 5.9 112 115-280 82-201 (635)
197 COG1877 OtsB Trehalose-6-phosp 94.5 1.1 2.5E-05 41.8 13.6 65 237-303 181-248 (266)
198 COG4502 5'(3')-deoxyribonucleo 93.9 0.16 3.4E-06 42.9 5.7 104 127-305 65-176 (180)
199 KOG0210 P-type ATPase [Inorgan 93.9 0.9 1.9E-05 47.6 12.2 60 241-303 771-832 (1051)
200 COG3882 FkbH Predicted enzyme 93.7 0.39 8.4E-06 48.2 9.1 39 237-275 310-348 (574)
201 KOG3107 Predicted haloacid deh 93.2 0.58 1.3E-05 45.5 9.1 43 239-282 410-452 (468)
202 PLN03190 aminophospholipid tra 93.2 0.26 5.7E-06 55.2 7.8 48 255-303 872-922 (1178)
203 PLN03017 trehalose-phosphatase 92.8 0.5 1.1E-05 46.2 8.4 72 237-308 282-360 (366)
204 PLN02151 trehalose-phosphatase 92.6 0.53 1.2E-05 45.8 8.2 71 238-308 269-346 (354)
205 TIGR01689 EcbF-BcbF capsule bi 91.8 0.21 4.7E-06 41.3 3.9 16 45-60 1-16 (126)
206 PF08235 LNS2: LNS2 (Lipin/Ned 91.0 1.1 2.4E-05 38.6 7.5 20 257-276 122-141 (157)
207 TIGR01452 PGP_euk phosphoglyco 90.5 1.3 2.8E-05 41.4 8.2 47 130-176 18-70 (279)
208 TIGR01658 EYA-cons_domain eyes 90.4 1.2 2.7E-05 40.9 7.6 45 239-283 215-259 (274)
209 PF05822 UMPH-1: Pyrimidine 5' 90.1 1.8 3.9E-05 40.0 8.5 52 111-166 75-129 (246)
210 TIGR01484 HAD-SF-IIB HAD-super 89.1 0.36 7.8E-06 42.4 3.1 27 47-73 1-28 (204)
211 TIGR02468 sucrsPsyn_pln sucros 88.4 3.9 8.4E-05 45.3 10.9 57 219-279 941-999 (1050)
212 COG0647 NagD Predicted sugar p 87.8 2.5 5.5E-05 39.6 8.0 51 127-177 21-78 (269)
213 PF06189 5-nucleotidase: 5'-nu 87.3 2.6 5.6E-05 39.2 7.6 35 246-285 228-262 (264)
214 KOG2961 Predicted hydrolase (H 86.2 0.68 1.5E-05 39.6 2.9 33 252-284 137-170 (190)
215 PRK10187 trehalose-6-phosphate 85.9 0.81 1.7E-05 42.6 3.6 28 46-73 15-47 (266)
216 COG2216 KdpB High-affinity K+ 85.1 1 2.2E-05 45.7 3.9 86 130-280 447-535 (681)
217 KOG2470 Similar to IMP-GMP spe 83.9 2.4 5.1E-05 41.1 5.7 115 133-280 243-374 (510)
218 PLN02580 trehalose-phosphatase 79.8 4 8.6E-05 40.2 5.8 33 131-163 142-176 (384)
219 PF02358 Trehalose_PPase: Treh 78.8 2.9 6.2E-05 37.9 4.3 61 236-296 163-234 (235)
220 KOG3128 Uncharacterized conser 78.6 7.5 0.00016 36.1 6.8 54 109-166 121-177 (298)
221 KOG0206 P-type ATPase [General 75.9 6.2 0.00013 44.1 6.5 37 133-169 657-693 (1151)
222 TIGR01457 HAD-SF-IIA-hyp2 HAD- 73.2 18 0.0004 33.1 8.1 47 131-177 18-70 (249)
223 KOG0204 Calcium transporting A 71.3 15 0.00033 39.6 7.7 136 129-303 646-791 (1034)
224 PRK10444 UMP phosphatase; Prov 70.0 21 0.00045 32.8 7.7 47 130-176 17-69 (248)
225 PLN03017 trehalose-phosphatase 69.7 4.7 0.0001 39.5 3.4 29 45-73 111-144 (366)
226 TIGR00685 T6PP trehalose-phosp 65.6 3.6 7.9E-05 37.5 1.7 13 46-58 4-16 (244)
227 COG0078 ArgF Ornithine carbamo 63.4 85 0.0018 30.0 10.3 110 137-280 64-183 (310)
228 TIGR01458 HAD-SF-IIA-hyp3 HAD- 63.3 22 0.00048 32.7 6.5 47 131-177 22-74 (257)
229 KOG0205 Plasma membrane H+-tra 62.7 63 0.0014 34.3 9.9 57 239-295 569-626 (942)
230 PRK14501 putative bifunctional 62.4 6.3 0.00014 42.0 3.0 30 44-73 491-525 (726)
231 TIGR01460 HAD-SF-IIA Haloacid 61.8 47 0.001 30.0 8.3 49 129-177 13-68 (236)
232 PLN03063 alpha,alpha-trehalose 60.3 14 0.00031 40.0 5.2 74 236-309 676-786 (797)
233 PLN03064 alpha,alpha-trehalose 59.6 9.8 0.00021 41.8 3.9 36 130-165 622-661 (934)
234 KOG0209 P-type ATPase [Inorgan 58.8 16 0.00035 39.4 5.1 40 128-167 673-715 (1160)
235 PF06014 DUF910: Bacterial pro 58.0 5.3 0.00011 28.9 1.0 25 243-271 7-31 (62)
236 PLN02205 alpha,alpha-trehalose 55.3 11 0.00024 41.0 3.4 17 44-60 595-611 (854)
237 KOG0203 Na+/K+ ATPase, alpha s 54.9 42 0.00091 36.4 7.3 38 257-294 708-747 (1019)
238 KOG3189 Phosphomannomutase [Li 54.7 12 0.00026 33.7 2.9 33 46-79 12-44 (252)
239 TIGR02251 HIF-SF_euk Dullard-l 54.5 8.2 0.00018 33.0 1.9 16 46-61 2-17 (162)
240 smart00577 CPDc catalytic doma 54.1 8.6 0.00019 32.2 1.9 16 46-61 3-18 (148)
241 PLN03063 alpha,alpha-trehalose 53.1 56 0.0012 35.4 8.3 35 130-164 532-570 (797)
242 PF03332 PMM: Eukaryotic phosp 51.7 35 0.00075 31.0 5.4 41 254-307 175-219 (220)
243 KOG2456 Aldehyde dehydrogenase 51.7 1.1E+02 0.0025 30.4 9.3 56 257-313 216-278 (477)
244 PLN02382 probable sucrose-phos 48.1 18 0.0004 35.9 3.4 14 46-59 10-23 (413)
245 PLN02151 trehalose-phosphatase 48.0 15 0.00032 35.9 2.7 29 45-73 98-131 (354)
246 PF01071 GARS_A: Phosphoribosy 47.4 1.7E+02 0.0036 26.1 9.1 70 241-310 4-74 (194)
247 PF13535 ATP-grasp_4: ATP-gras 46.1 1.6E+02 0.0036 24.4 8.8 69 241-310 6-75 (184)
248 COG0027 PurT Formate-dependent 46.0 72 0.0016 30.8 6.7 83 240-327 115-198 (394)
249 PF02358 Trehalose_PPase: Treh 45.0 24 0.00052 31.8 3.5 25 49-73 1-30 (235)
250 TIGR02250 FCP1_euk FCP1-like p 41.5 19 0.00041 30.7 2.1 16 46-61 7-22 (156)
251 TIGR00715 precor6x_red precorr 40.2 46 0.00099 30.9 4.5 62 241-306 187-254 (256)
252 PF06437 ISN1: IMP-specific 5' 40.1 36 0.00077 33.6 3.9 44 238-283 349-401 (408)
253 KOG2134 Polynucleotide kinase 38.8 18 0.00039 35.6 1.7 19 43-61 73-91 (422)
254 PRK00192 mannosyl-3-phosphogly 37.0 59 0.0013 29.9 4.8 41 129-169 20-63 (273)
255 TIGR01456 CECR5 HAD-superfamil 36.1 1.2E+02 0.0025 28.9 6.8 46 129-174 15-71 (321)
256 PF02571 CbiJ: Precorrin-6x re 34.5 58 0.0012 30.1 4.3 60 241-304 184-248 (249)
257 PRK10513 sugar phosphate phosp 33.0 1.1E+02 0.0023 27.9 5.8 48 130-177 20-70 (270)
258 PRK08057 cobalt-precorrin-6x r 32.5 77 0.0017 29.3 4.7 63 241-307 180-247 (248)
259 COG4483 Uncharacterized protei 31.7 42 0.0009 24.5 2.2 26 243-272 7-32 (68)
260 COG5083 SMP2 Uncharacterized p 30.6 26 0.00057 35.1 1.4 35 242-276 481-516 (580)
261 TIGR01487 SPP-like sucrose-pho 29.5 92 0.002 27.3 4.6 46 123-168 11-59 (215)
262 KOG0208 Cation transport ATPas 28.7 97 0.0021 34.3 5.2 46 134-179 712-757 (1140)
263 COG1105 FruK Fructose-1-phosph 28.3 3.1E+02 0.0068 26.3 8.2 133 134-303 41-193 (310)
264 PF05690 ThiG: Thiazole biosyn 28.1 4.9E+02 0.011 24.1 9.3 44 236-283 160-206 (247)
265 PF02786 CPSase_L_D2: Carbamoy 28.0 1.3E+02 0.0029 26.8 5.4 85 241-327 3-89 (211)
266 PRK01158 phosphoglycolate phos 26.5 1.1E+02 0.0025 26.8 4.7 40 129-168 19-61 (230)
267 KOG1605 TFIIF-interacting CTD 26.2 39 0.00085 31.6 1.6 37 129-165 130-168 (262)
268 PRK13790 phosphoribosylamine-- 25.2 3.5E+02 0.0076 26.3 8.2 68 241-308 69-136 (379)
269 KOG2882 p-Nitrophenyl phosphat 24.9 2.3E+02 0.005 27.1 6.5 36 132-167 40-81 (306)
270 PRK02228 V-type ATP synthase s 24.4 2.2E+02 0.0047 22.3 5.4 24 256-280 2-25 (100)
271 TIGR00099 Cof-subfamily Cof su 24.1 1.4E+02 0.0031 26.8 5.0 39 129-167 15-56 (256)
272 KOG0323 TFIIF-interacting CTD 23.7 91 0.002 32.9 3.9 51 128-178 199-253 (635)
273 TIGR02463 MPGP_rel mannosyl-3- 23.2 1.5E+02 0.0033 25.9 4.9 33 135-167 21-56 (221)
274 COG2897 SseA Rhodanese-related 22.8 1.8E+02 0.004 27.5 5.4 48 236-283 71-124 (285)
275 PRK00885 phosphoribosylamine-- 21.9 6.3E+02 0.014 24.7 9.4 67 241-308 104-171 (420)
276 PF02222 ATP-grasp: ATP-grasp 21.5 4E+02 0.0086 23.0 7.0 59 247-306 1-61 (172)
277 cd01766 Ufm1 Urm1-like ubiquit 21.4 1.4E+02 0.003 22.4 3.4 39 237-275 26-64 (82)
278 COG0561 Cof Predicted hydrolas 21.4 1.6E+02 0.0034 26.7 4.7 47 122-168 12-61 (264)
279 PRK13789 phosphoribosylamine-- 21.3 6.6E+02 0.014 24.9 9.4 68 241-308 110-177 (426)
280 KOG2832 TFIIF-interacting CTD 21.2 3.1E+02 0.0068 27.0 6.6 42 130-171 214-257 (393)
281 PRK15126 thiamin pyrimidine py 21.1 1.7E+02 0.0036 26.7 4.8 46 123-168 12-60 (272)
282 PRK01372 ddl D-alanine--D-alan 20.9 6.6E+02 0.014 23.1 9.8 67 241-307 100-166 (304)
283 PF01990 ATP-synt_F: ATP synth 20.8 2.3E+02 0.005 21.6 4.9 24 257-281 1-24 (95)
284 TIGR00877 purD phosphoribosyla 20.3 4.9E+02 0.011 25.4 8.3 69 240-309 105-175 (423)
285 PRK12702 mannosyl-3-phosphogly 20.0 1.8E+02 0.0038 27.8 4.7 39 130-168 18-59 (302)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.97 E-value=3.2e-30 Score=226.67 Aligned_cols=221 Identities=62% Similarity=1.087 Sum_probs=208.0
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHHcCCCCCHHHHHHHHhc
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHG 122 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 122 (329)
.++++++||+|+||++.+..+...+++.+.+|+..++|++.+....+...+|+.+|.+.+++...+..++..+|.+.+++
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~ 92 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG 92 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCChhHHHHHHhCCCc-EEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhh
Q 020219 123 RLPYENLKPDPVLRSLLLSLPLR-KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA 201 (329)
Q Consensus 123 ~~~~~~~~~~pgv~~lL~~L~~~-~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (329)
++.++.+++.+..+++|-.|+.+ .++.||++..++.+.++++|+.++|++|++.+.....
T Consensus 93 ~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~------------------- 153 (244)
T KOG3109|consen 93 RLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI------------------- 153 (244)
T ss_pred cCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-------------------
Confidence 99999999999999999999987 9999999999999999999999999999998855420
Q ss_pred ccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEeCChhchHHHHHcCceEEEE
Q 020219 202 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~-~~e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
+.+.-|||.+.+|+.+.+..|++ |.+++||+||.++|+.|+++|+.++++
T Consensus 154 -----------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv 204 (244)
T KOG3109|consen 154 -----------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLV 204 (244)
T ss_pred -----------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEE
Confidence 11223999999999999999998 999999999999999999999999999
Q ss_pred cCCCCCCCCCEEeCCHhHHHHHHHHHHhccC
Q 020219 281 GKSQRVKGADYAFESIHNIKEAIPELWESDM 311 (329)
Q Consensus 281 ~~~~~~~~ad~i~~~l~el~~~l~~~~~~~~ 311 (329)
..+.....+++++.+....+++++++|+...
T Consensus 205 ~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 205 GREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred EeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 9999999999999999999999999999864
No 2
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.94 E-value=2.8e-25 Score=194.97 Aligned_cols=184 Identities=52% Similarity=0.925 Sum_probs=151.7
Q ss_pred cEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHHcCCCCCHHHHHHHHhccCC
Q 020219 46 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLP 125 (329)
Q Consensus 46 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 125 (329)
++|+||+||||+|+...+..++.+++.+++..+.|++......+...++..+|.....+... ...+.+.+.+.+.....
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999999999999998888777778889887766666666676677655554332 34456667776665433
Q ss_pred CCCCCCChhHHHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 126 YENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 126 ~~~~~~~pgv~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
+....++||+.++|+.|+.+++++||++...+...++++|+..+|+.++++++.+..
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------------------- 136 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD----------------------- 136 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc-----------------------
Confidence 456778999999999999999999999999999999999999999999998766530
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEE
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
. ...||+|++|+++++++|++|++|++|||+..|+++|+++|+.++++
T Consensus 137 -----------------------~----~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 137 -----------------------Y----LLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred -----------------------c----CCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 0 01499999999999999999999999999999999999999999874
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.93 E-value=5.9e-25 Score=197.35 Aligned_cols=199 Identities=19% Similarity=0.229 Sum_probs=147.9
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHHcCCCCCHHHHHHHHhc-
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHG- 122 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~- 122 (329)
++++|+||+||||+|+...+..++.+.+ ++++......+ .+....|.+.......-.+...+.+.+.+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~-----~~~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTL-----KTYYPNQYKRE----DVLPFIGPSLHDTFSKIDESKVEEMITTYREF 72 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHH-----HHhCCCCCCHH----HHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHH
Confidence 5799999999999998887777777533 44443222222 1233445543332211111112222222211
Q ss_pred --cCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHH
Q 020219 123 --RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFV 197 (329)
Q Consensus 123 --~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (329)
........++||+.++|+.|+ ++++++|++....+...++++|+..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~---------------- 136 (214)
T PRK13288 73 NHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH---------------- 136 (214)
T ss_pred HHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC----------------
Confidence 111245678999999999884 78899999999999999999999999999999876654
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceE
Q 020219 198 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT 277 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~ 277 (329)
+||+|.++++++++++++|++|++|||+.+|+++|+++|+.+
T Consensus 137 --------------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 137 --------------------------------------AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKT 178 (214)
T ss_pred --------------------------------------CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 799999999999999999999999999999999999999999
Q ss_pred EEEcCCCC------CCCCCEEeCCHhHHHHHHHH
Q 020219 278 VLIGKSQR------VKGADYAFESIHNIKEAIPE 305 (329)
Q Consensus 278 v~v~~~~~------~~~ad~i~~~l~el~~~l~~ 305 (329)
+++.++.. ...++++++++.++.+.+..
T Consensus 179 i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 179 AGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred EEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 99987742 34799999999999887754
No 4
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=1.2e-24 Score=200.48 Aligned_cols=199 Identities=25% Similarity=0.313 Sum_probs=143.1
Q ss_pred cCCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHH-Hc-CCCCC-----HH
Q 020219 42 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AI-GYDFD-----YD 114 (329)
Q Consensus 42 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~-~~-~~~~~-----~~ 114 (329)
..++++|+||+||||+|+...+..++.+.+.++-. ..|++... +.. .....|....... .. ..... ..
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~-~~g~~~~~-~~~---~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 93 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINF-NGGVPITE-EFF---VENIAGKHNEDIALGLFPDDLERGLKFTD 93 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhcc-ccCCCCCH-HHH---HHHcCCCCHHHHHHHHcCcchhhHHHHHH
Confidence 34679999999999999988888888864444210 01222211 110 1111233322221 11 10000 01
Q ss_pred HHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCCh
Q 020219 115 DYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 191 (329)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 191 (329)
.+.+.+.. .......++||+.++|+.| +++++|+|++....+...++++|+..+|+.++++++.+.
T Consensus 94 ~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~---------- 162 (248)
T PLN02770 94 DKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH---------- 162 (248)
T ss_pred HHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------
Confidence 11222211 1124578899999999887 478999999999999999999999999999999987764
Q ss_pred hhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHH
Q 020219 192 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~ 271 (329)
+||+|++|++++++++++|++|++|||+.+|+++|+
T Consensus 163 --------------------------------------------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~ 198 (248)
T PLN02770 163 --------------------------------------------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGV 198 (248)
T ss_pred --------------------------------------------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHH
Confidence 799999999999999999999999999999999999
Q ss_pred HcCceEEEEcCCCC-----CCCCCEEeCCHhHHH
Q 020219 272 RVGLDTVLIGKSQR-----VKGADYAFESIHNIK 300 (329)
Q Consensus 272 ~~G~~~v~v~~~~~-----~~~ad~i~~~l~el~ 300 (329)
++|+.++++.++.. ...|+++++++.++.
T Consensus 199 ~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 199 AAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred HCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 99999999976642 458999999999843
No 5
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.93 E-value=1.5e-24 Score=196.40 Aligned_cols=199 Identities=23% Similarity=0.284 Sum_probs=150.4
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHH--cCCCC------CHH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA--IGYDF------DYD 114 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~--~~~~~------~~~ 114 (329)
++++.|+||+||||+|+...+..++.. +.++.|.+......+. ...|........ .+... ..+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEIR----QLIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhcCCHHHHHHHHhccccchhHHHHHH
Confidence 467999999999999999999888774 6667787754433322 223333322211 11110 112
Q ss_pred HHHHHHhccCCCC-CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCC
Q 020219 115 DYHSFVHGRLPYE-NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 190 (329)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 190 (329)
.+.+.+....... ...++||+.++|..| +++.+++|+.+...+...++++|+..+|+.+++.++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~--------- 143 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP--------- 143 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence 2222222211111 357899999999887 478899999999999999999999999999999554443
Q ss_pred hhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHH
Q 020219 191 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a 270 (329)
.||+|..+..++++++++|++++||||+.+|+++|
T Consensus 144 ---------------------------------------------~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA 178 (220)
T COG0546 144 ---------------------------------------------PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAA 178 (220)
T ss_pred ---------------------------------------------CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHH
Confidence 69999999999999999988999999999999999
Q ss_pred HHcCceEEEEcCCC------CCCCCCEEeCCHhHHHHHHH
Q 020219 271 KRVGLDTVLIGKSQ------RVKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 271 ~~~G~~~v~v~~~~------~~~~ad~i~~~l~el~~~l~ 304 (329)
+++|++++++.++. ....+|+++.++.+|...+.
T Consensus 179 ~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 179 KAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 99999999998875 26689999999999988764
No 6
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.92 E-value=3.7e-24 Score=198.96 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=147.8
Q ss_pred cCCccEEEEeCCCCcccCcccH-HHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH--------------H-HH
Q 020219 42 AAKYDCLLFDLDDTLYPYSSGI-AAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA--------------G-LR 105 (329)
Q Consensus 42 ~~~~k~viFDlDGTL~d~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~--------------~-l~ 105 (329)
|+++|+|+||+||||+|+.... ..++.+ +.+.+|.+... +. +...+|.... . ..
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-EE----ARGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-HH----HHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 3568999999999999975432 455554 34456664322 11 1222222110 0 11
Q ss_pred HcCCCCCHHHH-------HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcccc-ceee
Q 020219 106 AIGYDFDYDDY-------HSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF-EGII 174 (329)
Q Consensus 106 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~ 174 (329)
..+.....+.+ .+.+.... .....++||+.++|+.| +++++|+|+.....+...++.+|+..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 12222222221 11111111 24578899999999988 4789999999999999999999888774 8888
Q ss_pred eeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCC-
Q 020219 175 CFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN- 253 (329)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~- 253 (329)
++++.+. .||+|++|..+++++|+.
T Consensus 150 ~~~~~~~------------------------------------------------------~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 150 TTDDVPA------------------------------------------------------GRPYPWMALKNAIELGVYD 175 (267)
T ss_pred cCCcCCC------------------------------------------------------CCCChHHHHHHHHHcCCCC
Confidence 8876553 699999999999999996
Q ss_pred CCcEEEEeCChhchHHHHHcCceEEEEcCCCC-----------------------------CCCCCEEeCCHhHHHHHHH
Q 020219 254 PQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 254 ~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~-----------------------------~~~ad~i~~~l~el~~~l~ 304 (329)
+++|+||||+.+|+++|+++|+.+|++.++.. ..+|+++++++.++.+.|.
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~ 255 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIA 255 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHH
Confidence 69999999999999999999999999987642 4589999999999999887
Q ss_pred HHHhccCcCc
Q 020219 305 ELWESDMKSE 314 (329)
Q Consensus 305 ~~~~~~~~~~ 314 (329)
.+-....+.+
T Consensus 256 ~~~~~~~~~~ 265 (267)
T PRK13478 256 DIEARLARGE 265 (267)
T ss_pred HHHHHHhcCC
Confidence 6655555544
No 7
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.92 E-value=6e-24 Score=191.32 Aligned_cols=196 Identities=17% Similarity=0.205 Sum_probs=145.2
Q ss_pred ccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-H----HcCCCCC-HH----
Q 020219 45 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-R----AIGYDFD-YD---- 114 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-~----~~~~~~~-~~---- 114 (329)
+|+|+||+||||+|+.+.+..++.+ +.++.|.+....+. ... ..|...... . ..+.+.. .+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEV-QSA---WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHH-HHh---hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 4799999999999999888888775 44456765433211 110 223332221 1 1122111 11
Q ss_pred HHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCc--cccceeeeeccCCCCCCCCCCC
Q 020219 115 DYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
.+.+.+..........++||+.++|+.| +++++++|++....+...++++|+. .+|+.++++++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~-------- 143 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA-------- 143 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence 1222222222223568999999999988 4779999999999999999999998 89999999887654
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEeCChhchH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQ 268 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~-~~e~l~VGDs~~Di~ 268 (329)
+||+|++++++++++++. |++|+||||+.+|++
T Consensus 144 ----------------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~ 177 (220)
T TIGR03351 144 ----------------------------------------------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLE 177 (220)
T ss_pred ----------------------------------------------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHH
Confidence 699999999999999997 799999999999999
Q ss_pred HHHHcCceE-EEEcCCC------CCCCCCEEeCCHhHHHHHH
Q 020219 269 AGKRVGLDT-VLIGKSQ------RVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 269 ~a~~~G~~~-v~v~~~~------~~~~ad~i~~~l~el~~~l 303 (329)
+|+++|+.+ +++.++. ....++++++++.++.+.+
T Consensus 178 aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 178 AGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred HHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 999999999 8887764 2457999999999887654
No 8
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=2.7e-24 Score=195.61 Aligned_cols=196 Identities=21% Similarity=0.181 Sum_probs=143.9
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHH-cCCCCCH-------HH
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-IGYDFDY-------DD 115 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~-~~~~~~~-------~~ 115 (329)
++|+|+||+||||+|+...+..++.. +.+++|.+....+.+ ....|........ ....... +.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQL----RPVVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 56899999999999988887777774 556677654332222 1122322222111 1111111 12
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChh
Q 020219 116 YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED 192 (329)
Q Consensus 116 ~~~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 192 (329)
+.+.+.... .....++||+.++|+.|+ ++++++|++........++++|+..+|+.++++++.+.
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------- 149 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE----------- 149 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence 222222211 134678999999998884 67899999999888889999999999999888765443
Q ss_pred hHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHH
Q 020219 193 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~ 272 (329)
+||+|+++.++++++|++|++|++|||+.+|+++|++
T Consensus 150 -------------------------------------------~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~ 186 (229)
T PRK13226 150 -------------------------------------------RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA 186 (229)
T ss_pred -------------------------------------------CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH
Confidence 6999999999999999999999999999999999999
Q ss_pred cCceEEEEcCCCC-------CCCCCEEeCCHhHHHHHH
Q 020219 273 VGLDTVLIGKSQR-------VKGADYAFESIHNIKEAI 303 (329)
Q Consensus 273 ~G~~~v~v~~~~~-------~~~ad~i~~~l~el~~~l 303 (329)
+|+.++++.++.. ...++++++++.+|.+.+
T Consensus 187 aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 187 AGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 9999999977652 346999999999887654
No 9
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.92 E-value=4e-24 Score=193.10 Aligned_cols=196 Identities=19% Similarity=0.196 Sum_probs=145.4
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-----HHcCC-CCCHHHH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGY-DFDYDDY 116 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-----~~~~~-~~~~~~~ 116 (329)
.++++|+||+||||+|+...+..++.+ +.++.|++....+. +....|...... ...+. ....+.+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREE----LPDTLGLRIDQVVDLWYARQPWNGPSRQEV 75 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHH----HHHhhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 468999999999999987777676664 45667765433222 222233222111 11111 1112222
Q ss_pred ----HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 117 ----HSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 117 ----~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
.+.+... ......++||+.++|+.| +++++++|++........++++|+..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------- 146 (222)
T PRK10826 76 VQRIIARVISL-IEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY-------- 146 (222)
T ss_pred HHHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC--------
Confidence 1122111 124578899999999887 478999999999999999999999999999999876554
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
+||+|++++.+++++|++|++|++|||+.+|+++
T Consensus 147 ----------------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~a 180 (222)
T PRK10826 147 ----------------------------------------------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIA 180 (222)
T ss_pred ----------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHH
Confidence 7999999999999999999999999999999999
Q ss_pred HHHcCceEEEEcCCCC-----CCCCCEEeCCHhHHHHH
Q 020219 270 GKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKEA 302 (329)
Q Consensus 270 a~~~G~~~v~v~~~~~-----~~~ad~i~~~l~el~~~ 302 (329)
|+++|+.+|+++++.. ...+++++.++.|+.+.
T Consensus 181 A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~ 218 (222)
T PRK10826 181 AKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAA 218 (222)
T ss_pred HHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhh
Confidence 9999999999987642 34789999999998654
No 10
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.92 E-value=8.1e-24 Score=194.90 Aligned_cols=195 Identities=16% Similarity=0.131 Sum_probs=140.3
Q ss_pred ccEEEEeCCCCcccCccc-HHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH---------------HHHHcC
Q 020219 45 YDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA---------------GLRAIG 108 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~---------------~l~~~~ 108 (329)
+++|+||+||||+|+... +..++.+ ..+++|.+... +. +....|.... .....+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVE-----AFAEFGVQITL-EE----ARGPMGLGKWDHIRALLKMPAVAERWRAKFG 71 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHH-----HHHHcCCCccH-HH----HHHhcCccHHHHHHHHhcCHHHHHHHHHHhC
Confidence 689999999999997543 4555554 33446654322 11 1222222211 011222
Q ss_pred CCCCHHHHH---HHHhc---cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcccc-ceeeeecc
Q 020219 109 YDFDYDDYH---SFVHG---RLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF-EGIICFET 178 (329)
Q Consensus 109 ~~~~~~~~~---~~~~~---~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~~~~ 178 (329)
.....+.+. +.+.. ........++||+.++|+.| +++++|+|++....+...++++|+..+| +.++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~ 151 (253)
T TIGR01422 72 RLPTEADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDD 151 (253)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcccc
Confidence 222222211 11111 11124578899999999988 4789999999999999999999999986 88998876
Q ss_pred CCCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCC-CCcE
Q 020219 179 LNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRT 257 (329)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~-~~e~ 257 (329)
.+. .||+|++|..+++++++. |++|
T Consensus 152 ~~~------------------------------------------------------~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 152 VPA------------------------------------------------------GRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CCC------------------------------------------------------CCCCHHHHHHHHHHcCCCCchhe
Confidence 654 699999999999999995 9999
Q ss_pred EEEeCChhchHHHHHcCceEEEEcCCCC-----------------------------CCCCCEEeCCHhHHHHHH
Q 020219 258 LFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAI 303 (329)
Q Consensus 258 l~VGDs~~Di~~a~~~G~~~v~v~~~~~-----------------------------~~~ad~i~~~l~el~~~l 303 (329)
++|||+.+|+++|+++|+.+|++.++.. ..+|+++++++.++.+.|
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 9999999999999999999999987642 457999999999987654
No 11
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=2.8e-24 Score=193.79 Aligned_cols=197 Identities=16% Similarity=0.203 Sum_probs=141.3
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH-----HHHHcCCCCCHHHHH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA-----GLRAIGYDFDYDDYH 117 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~-----~l~~~~~~~~~~~~~ 117 (329)
+++++|+||+||||+|+...+..++.+ +.+++|++.... ..... ..|.... .....+...+.+.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~-~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLE-EVFKR---FKGVKLYEIIDIISKEHGVTLAKAELE 72 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHH-HHHHH---hcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 357999999999999987766666664 445577654321 11111 1222211 112334444444444
Q ss_pred HHHhccC---CCCCCCCChhHHHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccc-eeeeeccCCCCCCCCCCCChhh
Q 020219 118 SFVHGRL---PYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFE-GIICFETLNPTHKNTVSDDEDD 193 (329)
Q Consensus 118 ~~~~~~~---~~~~~~~~pgv~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~ 193 (329)
+.+.... ......++||+.++|+.|+++++++||+....+...++++|+..+|+ .++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------ 140 (221)
T PRK10563 73 PVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------ 140 (221)
T ss_pred HHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence 3332211 12457889999999999999999999999999999999999999996 5677665553
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 194 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
.||+|++|+.++++++++|++|++|||+.+|+++|+++
T Consensus 141 ------------------------------------------~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~a 178 (221)
T PRK10563 141 ------------------------------------------WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAA 178 (221)
T ss_pred ------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHC
Confidence 69999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCC----CCCCCEEeCCHhHHHHH
Q 020219 274 GLDTVLIGKSQR----VKGADYAFESIHNIKEA 302 (329)
Q Consensus 274 G~~~v~v~~~~~----~~~ad~i~~~l~el~~~ 302 (329)
|+.++++.++.. ...++.++.++.++.+.
T Consensus 179 G~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 179 GMEVFYFCADPHNKPIDHPLVTTFTDLAQLPEL 211 (221)
T ss_pred CCEEEEECCCCCCcchhhhhhHHHHHHHHHHHH
Confidence 999998864431 22445556666666654
No 12
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.92 E-value=1.2e-23 Score=189.23 Aligned_cols=198 Identities=27% Similarity=0.388 Sum_probs=139.3
Q ss_pred ccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHH---HHHHHhhccc----H-HHHHHcCCCCCHHHH
Q 020219 45 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG---NLLYKNYGTT----M-AGLRAIGYDFDYDDY 116 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~---~~~~~~~g~~----~-~~l~~~~~~~~~~~~ 116 (329)
+++|+||+||||+|+...+..++....+. ....|++... +... ...++..+.. . ......+.....+..
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDF-EEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLV 78 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCH-HHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHH
Confidence 68999999999999888877766543322 3345554322 1111 1111222211 1 111111111111111
Q ss_pred HHHHhc--cCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCCh
Q 020219 117 HSFVHG--RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 191 (329)
Q Consensus 117 ~~~~~~--~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 191 (329)
.+.... ........++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 148 (221)
T TIGR02253 79 AAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV---------- 148 (221)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence 111110 011244688999999999884 77999999998889999999999999999999887764
Q ss_pred hhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHH
Q 020219 192 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAG 270 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a 270 (329)
+||+|++|+.+++++|++|++|++|||+. +|+.+|
T Consensus 149 --------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A 184 (221)
T TIGR02253 149 --------------------------------------------EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGA 184 (221)
T ss_pred --------------------------------------------CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHH
Confidence 79999999999999999999999999998 899999
Q ss_pred HHcCceEEEEcCCCC-------CCCCCEEeCCHhHH
Q 020219 271 KRVGLDTVLIGKSQR-------VKGADYAFESIHNI 299 (329)
Q Consensus 271 ~~~G~~~v~v~~~~~-------~~~ad~i~~~l~el 299 (329)
+++|+.+|++.++.. ...+++++.++.++
T Consensus 185 ~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 185 KNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 999999999987653 24688999998875
No 13
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.91 E-value=1.8e-23 Score=186.76 Aligned_cols=191 Identities=26% Similarity=0.296 Sum_probs=140.7
Q ss_pred EEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH----H-HHHcCCCCCHH---HH---
Q 020219 48 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA----G-LRAIGYDFDYD---DY--- 116 (329)
Q Consensus 48 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~----~-l~~~~~~~~~~---~~--- 116 (329)
|+||+||||+|+...+..++.. +.++.|.+....+.+. ...|.... . +...+...+.+ .+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARVI----GFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999987777776664 4556776533322221 22233221 1 11112222211 22
Q ss_pred -HHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChh
Q 020219 117 -HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED 192 (329)
Q Consensus 117 -~~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 192 (329)
.+.+... ......++||+.++|+.|+ ++++++|++....+...++++|+..+|+.++++++.+.
T Consensus 72 ~~~~~~~~-~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (213)
T TIGR01449 72 FDRHYEEV-AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------- 139 (213)
T ss_pred HHHHHHHh-ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence 2222211 1235788999999999884 78999999999999999999999999999998876554
Q ss_pred hHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHH
Q 020219 193 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~ 272 (329)
.||+|+++.+++++++++|++|++|||+.+|+++|++
T Consensus 140 -------------------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~ 176 (213)
T TIGR01449 140 -------------------------------------------RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA 176 (213)
T ss_pred -------------------------------------------CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 6999999999999999999999999999999999999
Q ss_pred cCceEEEEcCCCC------CCCCCEEeCCHhHHHHH
Q 020219 273 VGLDTVLIGKSQR------VKGADYAFESIHNIKEA 302 (329)
Q Consensus 273 ~G~~~v~v~~~~~------~~~ad~i~~~l~el~~~ 302 (329)
+|+.++++.++.. ...|+++++++.++...
T Consensus 177 aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 177 AGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 9999999976642 45799999999998764
No 14
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.91 E-value=2.8e-23 Score=192.78 Aligned_cols=206 Identities=12% Similarity=0.144 Sum_probs=149.5
Q ss_pred cCCccEEEEeCCCCcccCcccH-HHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-HHc-CCCCCHH---H
Q 020219 42 AAKYDCLLFDLDDTLYPYSSGI-AAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAI-GYDFDYD---D 115 (329)
Q Consensus 42 ~~~~k~viFDlDGTL~d~~~~~-~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-~~~-~~~~~~~---~ 115 (329)
.+.+|+|+|||||||+|+...+ ..++.+ +.+++|++....+. .....|...... ..+ +.....+ .
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~ 91 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKR 91 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHH
Confidence 4678999999999999976544 446554 55667876433211 122344443322 111 1111111 1
Q ss_pred HHHHHhc---cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 116 YHSFVHG---RLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 116 ~~~~~~~---~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
+.+.... ........++||+.++|+.| +++++|+||.....+...++++|+..+|+.++++++...
T Consensus 92 l~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~-------- 163 (260)
T PLN03243 92 LAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR-------- 163 (260)
T ss_pred HHHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC--------
Confidence 1111111 11113567899999999988 478999999999999999999999999999999987654
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
+||+|++|..+++++|++|++|++|||+.+|+++
T Consensus 164 ----------------------------------------------~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~a 197 (260)
T PLN03243 164 ----------------------------------------------GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEA 197 (260)
T ss_pred ----------------------------------------------CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHH
Confidence 7999999999999999999999999999999999
Q ss_pred HHHcCceEEEEcCCC---CCCCCCEEeCCHhHHHHHHHHHHhcc
Q 020219 270 GKRVGLDTVLIGKSQ---RVKGADYAFESIHNIKEAIPELWESD 310 (329)
Q Consensus 270 a~~~G~~~v~v~~~~---~~~~ad~i~~~l~el~~~l~~~~~~~ 310 (329)
|+++|+.++++.... ....++++++++.++....-+-|+..
T Consensus 198 A~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 198 AHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred HHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 999999999986322 24468999999999987766655543
No 15
>PRK11587 putative phosphatase; Provisional
Probab=99.91 E-value=2.8e-23 Score=187.35 Aligned_cols=191 Identities=20% Similarity=0.221 Sum_probs=138.5
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH-HHHcCCCCCHHHHHHHHhc
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRAIGYDFDYDDYHSFVHG 122 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~ 122 (329)
++|+|+||+||||+|+...+..++.+ +.+++|++... ... ...|..... ++........+.+.+.+..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~---~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDE---VLN---FIHGKQAITSLRHFMAGASEAEIQAEFTR 70 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHH---HHH---HHcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence 57999999999999988888888775 45567775321 111 112332221 1222111222222221111
Q ss_pred -----cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhH
Q 020219 123 -----RLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI 194 (329)
Q Consensus 123 -----~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 194 (329)
........++||+.++|+.| +++++++||+........++..|+ ..|+.+++.++...
T Consensus 71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------- 136 (218)
T PRK11587 71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------- 136 (218)
T ss_pred HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC-------------
Confidence 11124678899999999887 478999999988877888888888 46788887765543
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcC
Q 020219 195 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G 274 (329)
.||+|+++..+++++|++|++|++|||+.+|+++|+++|
T Consensus 137 -----------------------------------------~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG 175 (218)
T PRK11587 137 -----------------------------------------GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAG 175 (218)
T ss_pred -----------------------------------------CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCC
Confidence 699999999999999999999999999999999999999
Q ss_pred ceEEEEcCCC---CCCCCCEEeCCHhHHH
Q 020219 275 LDTVLIGKSQ---RVKGADYAFESIHNIK 300 (329)
Q Consensus 275 ~~~v~v~~~~---~~~~ad~i~~~l~el~ 300 (329)
+.++++.++. ....++++++++.++.
T Consensus 176 ~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 176 CHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred CEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999998764 2457899999999874
No 16
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.91 E-value=7.8e-23 Score=185.72 Aligned_cols=202 Identities=18% Similarity=0.215 Sum_probs=141.0
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhccc-----HHHH-HHcCCCCCHHHHH
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTT-----MAGL-RAIGYDFDYDDYH 117 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~-----~~~l-~~~~~~~~~~~~~ 117 (329)
++|+|+|||||||+|+... ...+.....+.+.+..|.+...........+...+.. ...+ ...+.. ...+.
T Consensus 9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 85 (224)
T PRK14988 9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICAMT 85 (224)
T ss_pred cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHHHH
Confidence 4689999999999994311 2233343444455777876443222111111111100 1111 111111 11111
Q ss_pred HHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhH
Q 020219 118 SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI 194 (329)
Q Consensus 118 ~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 194 (329)
.. ......++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 86 ~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~------------- 147 (224)
T PRK14988 86 TE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY------------- 147 (224)
T ss_pred HH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC-------------
Confidence 11 1245788999999999884 77999999999999999999999999999999887664
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcC
Q 020219 195 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 274 (329)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G 274 (329)
.||+|++|+++++++|++|++|+||||+.+|+++|+++|
T Consensus 148 -----------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG 186 (224)
T PRK14988 148 -----------------------------------------PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFG 186 (224)
T ss_pred -----------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcC
Confidence 799999999999999999999999999999999999999
Q ss_pred ceE-EEEcCCC--CCCCCCEEeCCHhHHHHHHHHHH
Q 020219 275 LDT-VLIGKSQ--RVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 275 ~~~-v~v~~~~--~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
+.+ +++.++. ....+..+..++.++.+.+..+.
T Consensus 187 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 187 IRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred CeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 984 6676554 24566677788888887776654
No 17
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.91 E-value=5.3e-23 Score=183.47 Aligned_cols=193 Identities=18% Similarity=0.262 Sum_probs=143.7
Q ss_pred EEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-HHcCCCCC-HHHHHHHHhccCC
Q 020219 48 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFD-YDDYHSFVHGRLP 125 (329)
Q Consensus 48 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-~~~~~~~~-~~~~~~~~~~~~~ 125 (329)
|+||+||||+|+.+.+..++.+.+.+ ..|.+....+ .+.+..|...... ...+.+.. ...+...... .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYRE----VVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHH----hcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 68999999999988888887753332 2354322222 1223334433222 22332211 1112111211 1
Q ss_pred CCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhc
Q 020219 126 YENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS 202 (329)
Q Consensus 126 ~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (329)
.....++||+.++|++| +++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------------- 129 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------------- 129 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC---------------------
Confidence 24678899999999987 478999999999999999999999999999998876543
Q ss_pred cccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcC
Q 020219 203 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~ 282 (329)
+||+|.++++++++++++|++|+||||+.+|+++|+++|+.++++.+
T Consensus 130 ---------------------------------~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~ 176 (205)
T TIGR01454 130 ---------------------------------PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW 176 (205)
T ss_pred ---------------------------------CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 79999999999999999999999999999999999999999999987
Q ss_pred CCC------CCCCCEEeCCHhHHHHHHH
Q 020219 283 SQR------VKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 283 ~~~------~~~ad~i~~~l~el~~~l~ 304 (329)
+.. ...++++++++.++.+.++
T Consensus 177 g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 177 GEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred cCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 752 5579999999999987654
No 18
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=1e-22 Score=183.34 Aligned_cols=202 Identities=21% Similarity=0.254 Sum_probs=147.7
Q ss_pred ccCCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-----HHcCCCCCHHH
Q 020219 41 AAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDD 115 (329)
Q Consensus 41 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-----~~~~~~~~~~~ 115 (329)
..+++++|+||+||||+|+...+..++.. +.+++|.+......+. ...|.....+ ...+.....+.
T Consensus 2 ~~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~ 72 (226)
T PRK13222 2 KFMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEEL 72 (226)
T ss_pred CCCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHHH
Confidence 34578999999999999987766666653 4455676543332221 1122221111 11111122221
Q ss_pred -------HHHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCC
Q 020219 116 -------YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN 185 (329)
Q Consensus 116 -------~~~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 185 (329)
+.+.+.... .....++||+.++|+.++ ++++++|++.......+++++|+..+|+.+++.++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---- 147 (226)
T PRK13222 73 LEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN---- 147 (226)
T ss_pred HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC----
Confidence 222222211 235778999999998874 77899999999999999999999999999988776553
Q ss_pred CCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChh
Q 020219 186 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR 265 (329)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~ 265 (329)
.||+|.+++.+++++++++++|++|||+.+
T Consensus 148 --------------------------------------------------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~ 177 (226)
T PRK13222 148 --------------------------------------------------KKPDPAPLLLACEKLGLDPEEMLFVGDSRN 177 (226)
T ss_pred --------------------------------------------------CCcChHHHHHHHHHcCCChhheEEECCCHH
Confidence 699999999999999999999999999999
Q ss_pred chHHHHHcCceEEEEcCCCC------CCCCCEEeCCHhHHHHHHHHH
Q 020219 266 NIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPEL 306 (329)
Q Consensus 266 Di~~a~~~G~~~v~v~~~~~------~~~ad~i~~~l~el~~~l~~~ 306 (329)
|+++|+++|+.++++.++.. ...|++++.++.++..+|.+-
T Consensus 178 Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~~ 224 (226)
T PRK13222 178 DIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHHh
Confidence 99999999999999987642 347999999999999887653
No 19
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.91 E-value=8.5e-23 Score=197.50 Aligned_cols=207 Identities=11% Similarity=0.134 Sum_probs=150.7
Q ss_pred CCccEEEEeCCCCcccCcccHHH-HHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-HHc-CCCCCHH---HH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAA-ACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAI-GYDFDYD---DY 116 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~-~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-~~~-~~~~~~~---~~ 116 (329)
..+++|||||||||+|+...+.. ++.+ +.++.|++....+. .....|...... ..+ ....+.. .+
T Consensus 129 ~~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e~l 199 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELRRM 199 (381)
T ss_pred CCCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHHHH
Confidence 36799999999999997775443 5443 45667776443221 223345443322 111 1111111 12
Q ss_pred ----HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 117 ----HSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 117 ----~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
.+.+... ......++||+.++|+.| +++++|+|++....+...++++|+..+|+.++++++...
T Consensus 200 ~~~~~~~y~~~-~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~-------- 270 (381)
T PLN02575 200 ATRKEEIYQAL-QGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR-------- 270 (381)
T ss_pred HHHHHHHHHHH-hccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC--------
Confidence 2222221 123467899999999988 478999999999999999999999999999999987664
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
+||+|++|+++++++|++|++|++|||+.+|+++
T Consensus 271 ----------------------------------------------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeA 304 (381)
T PLN02575 271 ----------------------------------------------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEA 304 (381)
T ss_pred ----------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHH
Confidence 7999999999999999999999999999999999
Q ss_pred HHHcCceEEEEcCCCC---CCCCCEEeCCHhHHHHHHHHHHhccCcC
Q 020219 270 GKRVGLDTVLIGKSQR---VKGADYAFESIHNIKEAIPELWESDMKS 313 (329)
Q Consensus 270 a~~~G~~~v~v~~~~~---~~~ad~i~~~l~el~~~l~~~~~~~~~~ 313 (329)
|+++|+.+|++.++.. ...++++++++.+|....-+-+...+.+
T Consensus 305 Ak~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~~ 351 (381)
T PLN02575 305 AHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIESP 351 (381)
T ss_pred HHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcCcc
Confidence 9999999999986542 3468999999999965544444444433
No 20
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.90 E-value=1.9e-22 Score=181.23 Aligned_cols=199 Identities=26% Similarity=0.318 Sum_probs=142.8
Q ss_pred ccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHH--HH---HHHHHHhh--c-ccHH---------HHHHc
Q 020219 45 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--DL---GNLLYKNY--G-TTMA---------GLRAI 107 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~--~~---~~~~~~~~--g-~~~~---------~l~~~ 107 (329)
+|+|+||+||||+|+...+..++.+ +.++.|++..... .. ....+..+ + .... .....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999988877766664 3445666532211 11 01111111 1 1111 11222
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCC
Q 020219 108 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN 185 (329)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 185 (329)
+.....+.+.+.+.... .....++||+.++|+.++ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~---- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI---- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----
Confidence 32222222322222211 134678999999998885 77899999999999999999999999999999887664
Q ss_pred CCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHc-CCCCCcEEEEeCCh
Q 020219 186 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA-SINPQRTLFFEDSV 264 (329)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~-~v~~~e~l~VGDs~ 264 (329)
.||+|.+++++++++ +++|++|+||||+.
T Consensus 151 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~ 180 (224)
T TIGR02254 151 --------------------------------------------------QKPDKEIFNYALERMPKFSKEEVLMIGDSL 180 (224)
T ss_pred --------------------------------------------------CCCCHHHHHHHHHHhcCCCchheEEECCCc
Confidence 699999999999999 99999999999998
Q ss_pred -hchHHHHHcCceEEEEcCCC----CCCCCCEEeCCHhHHHHHH
Q 020219 265 -RNIQAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 265 -~Di~~a~~~G~~~v~v~~~~----~~~~ad~i~~~l~el~~~l 303 (329)
+|+++|+++|+.+++++++. ....++++++++.+|.+.|
T Consensus 181 ~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 181 TADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred HHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 79999999999999997653 2346889999999987653
No 21
>PRK09449 dUMP phosphatase; Provisional
Probab=99.90 E-value=2.3e-22 Score=181.46 Aligned_cols=123 Identities=24% Similarity=0.297 Sum_probs=108.0
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 128 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
...++||+.++|+.|+ ++++++||+........++++|+..+|+.++++++.+.
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------ 148 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV------------------------ 148 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC------------------------
Confidence 4678999999999985 77899999999999999999999999999999987764
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEeCCh-hchHHHHHcCceEEEEcCC
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~-~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~ 283 (329)
.||+|++|+++++++|+. +++|++|||+. +|+++|+++|+.+++++++
T Consensus 149 ------------------------------~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~ 198 (224)
T PRK09449 149 ------------------------------AKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAH 198 (224)
T ss_pred ------------------------------CCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence 699999999999999985 58999999998 6999999999999999743
Q ss_pred C----CCCCCCEEeCCHhHHHHHHH
Q 020219 284 Q----RVKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 284 ~----~~~~ad~i~~~l~el~~~l~ 304 (329)
. ....+++++.++.+|.+.+.
T Consensus 199 ~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 199 GREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CCCCCCCCCCeEEECCHHHHHHHHh
Confidence 2 23468999999999988764
No 22
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=4e-22 Score=186.25 Aligned_cols=198 Identities=18% Similarity=0.241 Sum_probs=146.4
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-HHcCCCC-CHH----HH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDF-DYD----DY 116 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-~~~~~~~-~~~----~~ 116 (329)
.++++++||+||||+|+...+..++.+ ..+++|++....+. +....|...... ...+... ..+ .+
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 130 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRV 130 (273)
T ss_pred hhcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHH
Confidence 357999999999999988888777764 45667765333221 111223222222 2222210 111 22
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhh
Q 020219 117 HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD 193 (329)
Q Consensus 117 ~~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 193 (329)
.+.+.. ......++||+.++|+.|+ ++++|+|++....+...++++|+..+|+.+++.+..
T Consensus 131 ~~~~~~--~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-------------- 194 (273)
T PRK13225 131 QRQLGD--CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-------------- 194 (273)
T ss_pred HHHHHh--hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC--------------
Confidence 222222 1356788999999999884 788999999999999999999999999988765421
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 194 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
+++++.+++++++++++|++|++|||+.+|+++|+++
T Consensus 195 -------------------------------------------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~A 231 (273)
T PRK13225 195 -------------------------------------------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQV 231 (273)
T ss_pred -------------------------------------------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHC
Confidence 3456889999999999999999999999999999999
Q ss_pred CceEEEEcCCCC------CCCCCEEeCCHhHHHHHHHHHHh
Q 020219 274 GLDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 274 G~~~v~v~~~~~------~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
|+.++++.++.. ...|+++++++.+|.+.+.+++.
T Consensus 232 G~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 232 GLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred CCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 999999988742 45799999999999998877653
No 23
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.89 E-value=2.3e-22 Score=187.75 Aligned_cols=199 Identities=22% Similarity=0.269 Sum_probs=146.4
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHH--cC-----CCCCH---
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA--IG-----YDFDY--- 113 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~--~~-----~~~~~--- 113 (329)
++|+|+||+||||+|+...+..++.. +.+++|.+....+.+ ....|.....+.. ++ ...+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDELA 82 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHHH
Confidence 56899999999999988887777764 556677764332221 2223332221111 00 11111
Q ss_pred HHHHHHHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCC
Q 020219 114 DDYHSFVHGRL--PYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVS 188 (329)
Q Consensus 114 ~~~~~~~~~~~--~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 188 (329)
+.+.+.+.+.. ......++||+.++|+.| +++++++|+.+...+...+.++|+..+|+.++++++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------- 155 (272)
T PRK13223 83 EQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------- 155 (272)
T ss_pred HHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC-------
Confidence 12222222111 123467899999999887 478999999999989999999999999999998876543
Q ss_pred CChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchH
Q 020219 189 DDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQ 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~ 268 (329)
.||+|.+++.+++++|++|++|++|||+.+|++
T Consensus 156 -----------------------------------------------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~ 188 (272)
T PRK13223 156 -----------------------------------------------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVL 188 (272)
T ss_pred -----------------------------------------------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHH
Confidence 699999999999999999999999999999999
Q ss_pred HHHHcCceEEEEcCCCC------CCCCCEEeCCHhHHHHHHHH
Q 020219 269 AGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPE 305 (329)
Q Consensus 269 ~a~~~G~~~v~v~~~~~------~~~ad~i~~~l~el~~~l~~ 305 (329)
+|+++|+.++++.++.. ...++++++++.+|.+.+..
T Consensus 189 aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~ 231 (272)
T PRK13223 189 AAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCAD 231 (272)
T ss_pred HHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhc
Confidence 99999999999987642 35799999999999876554
No 24
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.89 E-value=1.4e-22 Score=183.76 Aligned_cols=196 Identities=27% Similarity=0.346 Sum_probs=142.5
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccH----HHHHHc-C-CC-CCHHHH
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTM----AGLRAI-G-YD-FDYDDY 116 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~----~~l~~~-~-~~-~~~~~~ 116 (329)
+++++||||||||+|+...+..+|.+ +.+++|+..+... .++..|... ..+... . .. .+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEE-----IRELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 46899999999999998888888885 5666887754411 222233211 111111 1 11 122222
Q ss_pred HHHHh--ccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCCh
Q 020219 117 HSFVH--GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 191 (329)
Q Consensus 117 ~~~~~--~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 191 (329)
..... .........+.||+.++|+.|+ ..+.+.|+.....+...+.++|+.++|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 21111 1122366889999999999997 77888888888899999999999999999999887765
Q ss_pred hhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHH
Q 020219 192 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~ 271 (329)
+||+|+.|..+++++|++|++|++|+|+.+++++|+
T Consensus 141 --------------------------------------------~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~ 176 (221)
T COG0637 141 --------------------------------------------GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAK 176 (221)
T ss_pred --------------------------------------------CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHH
Confidence 799999999999999999999999999999999999
Q ss_pred HcCceEEEEcCCCC--------CCCCCEEeCCHhHHHHHH
Q 020219 272 RVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI 303 (329)
Q Consensus 272 ~~G~~~v~v~~~~~--------~~~ad~i~~~l~el~~~l 303 (329)
++|+.+++++.+.. ...++.+..++.++...+
T Consensus 177 aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 177 AAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216 (221)
T ss_pred HCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence 99999999986433 334445555555555443
No 25
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.89 E-value=2.1e-22 Score=176.67 Aligned_cols=173 Identities=18% Similarity=0.321 Sum_probs=126.5
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH----H-HHcCCCCCHHHHHH
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L-RAIGYDFDYDDYHS 118 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~----l-~~~~~~~~~~~~~~ 118 (329)
++++|+||+||||+|+...+..++.+ +.+++|.+... . .+....|..... + ...+.....+.+..
T Consensus 4 ~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-Q----AMVALNGSPTWRIAQAIIELNQADLDPHALAR 73 (188)
T ss_pred cceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 57999999999999988877777775 44456765322 1 112223332211 1 11222333333322
Q ss_pred HH---hccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhh
Q 020219 119 FV---HGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD 193 (329)
Q Consensus 119 ~~---~~~~~~~~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 193 (329)
.. ..+.......++|+ .++|+.|+ ++++++|++....+...++++|+..+|+.++++++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~------------ 140 (188)
T PRK10725 74 EKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH------------ 140 (188)
T ss_pred HHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC------------
Confidence 11 11122345667886 47788774 67899999999999999999999999999999987664
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 194 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
.||+|+++++++++++++|++|++|||+.+|+++|+++
T Consensus 141 ------------------------------------------~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 141 ------------------------------------------HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAA 178 (188)
T ss_pred ------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHC
Confidence 69999999999999999999999999999999999999
Q ss_pred CceEEEEc
Q 020219 274 GLDTVLIG 281 (329)
Q Consensus 274 G~~~v~v~ 281 (329)
|+.+|++.
T Consensus 179 G~~~i~~~ 186 (188)
T PRK10725 179 GMDAVDVR 186 (188)
T ss_pred CCEEEeec
Confidence 99999875
No 26
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.89 E-value=1.4e-21 Score=176.12 Aligned_cols=124 Identities=27% Similarity=0.418 Sum_probs=112.9
Q ss_pred CCCCChhHHHHHHhCCCc--EEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 128 NLKPDPVLRSLLLSLPLR--KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~~~--~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
...++|++.+.|+.++.+ ++++||+....+...+.++|+.++||.++++++.+.
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~------------------------ 152 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV------------------------ 152 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc------------------------
Confidence 478899999999998755 999999999999999999999999999999998885
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCC
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~ 284 (329)
.||+|.+|+++++++|++|++|+||||+. ||+.+|+++|+.+|+++++.
T Consensus 153 ------------------------------~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 153 ------------------------------AKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred ------------------------------CCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 79999999999999999999999999999 78899999999999998775
Q ss_pred CC-----CCCCEEeCCHhHHHHHHHH
Q 020219 285 RV-----KGADYAFESIHNIKEAIPE 305 (329)
Q Consensus 285 ~~-----~~ad~i~~~l~el~~~l~~ 305 (329)
.. ..+++.+.++.++.+.+..
T Consensus 203 ~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 203 KPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCCCCccCCceEEcCHHHHHHHHhh
Confidence 32 5799999999999988754
No 27
>PLN02940 riboflavin kinase
Probab=99.88 E-value=3.2e-22 Score=195.22 Aligned_cols=196 Identities=21% Similarity=0.287 Sum_probs=147.6
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH-----HHHcCCCCCHHHHH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-----LRAIGYDFDYDDYH 117 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~-----l~~~~~~~~~~~~~ 117 (329)
+.+++|+||+||||+|+...+..++.. +.+++|++....+ ..+..|..... +...+.....+++.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 78 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFN 78 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 458999999999999988877777764 4556776543211 22333433221 12233333333333
Q ss_pred HHHhccC--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHH-hcCCccccceeeeeccCCCCCCCCCCCCh
Q 020219 118 SFVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLS-RLGLEDCFEGIICFETLNPTHKNTVSDDE 191 (329)
Q Consensus 118 ~~~~~~~--~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~-~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 191 (329)
+.+.... ...+..++||+.++|+.|+ ++++|+||.....+...++ .+|+..+|+.++++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~---------- 148 (382)
T PLN02940 79 SEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK---------- 148 (382)
T ss_pred HHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC----------
Confidence 2222111 1245778999999999884 7799999999888888887 6899999999999987664
Q ss_pred hhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHH
Q 020219 192 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~ 271 (329)
+||+|+++..++++++++|++|++|||+.+|+++|+
T Consensus 149 --------------------------------------------~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~ 184 (382)
T PLN02940 149 --------------------------------------------GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGK 184 (382)
T ss_pred --------------------------------------------CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHH
Confidence 799999999999999999999999999999999999
Q ss_pred HcCceEEEEcCCC----CCCCCCEEeCCHhHHHHH
Q 020219 272 RVGLDTVLIGKSQ----RVKGADYAFESIHNIKEA 302 (329)
Q Consensus 272 ~~G~~~v~v~~~~----~~~~ad~i~~~l~el~~~ 302 (329)
++|+.+++++++. ....++++++++.++...
T Consensus 185 ~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~ 219 (382)
T PLN02940 185 AAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPE 219 (382)
T ss_pred HcCCEEEEECCCCcchhhccCccEEeCCHhHcCHH
Confidence 9999999998764 346899999999987644
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.88 E-value=1.5e-21 Score=178.62 Aligned_cols=199 Identities=16% Similarity=0.149 Sum_probs=135.3
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHh-CCCc---hhHHHHHHHHHH-----------hhccc-HHHHHH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKL-GIER---SKIEDLGNLLYK-----------NYGTT-MAGLRA 106 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~-gi~~---~~~~~~~~~~~~-----------~~g~~-~~~l~~ 106 (329)
.++|+|+||+||||+|+...+..++.+.+.. +.... +... .....+...+.. ..+.. ...+..
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAF-VQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD 86 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHH-HHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence 3579999999999999888888877765543 21110 1111 111111111100 00001 111233
Q ss_pred cCCCCCHH-----HHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccC
Q 020219 107 IGYDFDYD-----DYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETL 179 (329)
Q Consensus 107 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 179 (329)
.+...+.. ...+.+.. ......++||+.++|+.|+ ++++++||++.. ++.+|+..+|+.++++++.
T Consensus 87 ~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~ 159 (238)
T PRK10748 87 AGLSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH 159 (238)
T ss_pred cCCCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccC
Confidence 33322211 11111211 1134788999999999985 678999998765 4778999999999998876
Q ss_pred CCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 020219 180 NPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLF 259 (329)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~ 259 (329)
+. .||+|++|+++++++|++|++|+|
T Consensus 160 ~~------------------------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 160 GR------------------------------------------------------SKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred Cc------------------------------------------------------CCCcHHHHHHHHHHcCCChhHEEE
Confidence 64 699999999999999999999999
Q ss_pred EeCCh-hchHHHHHcCceEEEEcCCCC--------CCCCCEEeCCHhHHHHHH
Q 020219 260 FEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI 303 (329)
Q Consensus 260 VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~ad~i~~~l~el~~~l 303 (329)
|||+. +|+.+|+++|+.+++++++.. ...+++.+.++.+|.++|
T Consensus 186 VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 99995 999999999999999987532 246889999999988763
No 29
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.87 E-value=3.2e-21 Score=192.59 Aligned_cols=203 Identities=14% Similarity=0.168 Sum_probs=144.9
Q ss_pred cCCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHh-CCCchhHHHHHHHHHHhhcccHHHH-HHcCCCCC---HHH-
Q 020219 42 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKL-GIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFD---YDD- 115 (329)
Q Consensus 42 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~-gi~~~~~~~~~~~~~~~~g~~~~~l-~~~~~~~~---~~~- 115 (329)
.+|+++|+||+||||+|+...+..++.+.+.++..... +... ..+ .+.+..|...... ..+..... .++
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~-~~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~ 312 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT-PID----KYREIMGVPLPKVWEALLPDHSLEIREQT 312 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC-CHH----HHHHHcCCChHHHHHHHhhhcchhHHHHH
Confidence 35679999999999999999999999887766421111 1111 111 1222334332221 11110111 112
Q ss_pred ---HHHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 116 ---YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 116 ---~~~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
+.+.+..........++||+.++|++|+ ++++++|++....+...++++|+..+|+.++++++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~--------- 383 (459)
T PRK06698 313 DAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN--------- 383 (459)
T ss_pred HHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC---------
Confidence 2222222222245788999999998884 7899999999999999999999999999999987653
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
.||+|+.+..++++++ |++|++|||+.+|+++
T Consensus 384 ----------------------------------------------~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~a 415 (459)
T PRK06698 384 ----------------------------------------------SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINA 415 (459)
T ss_pred ----------------------------------------------CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHH
Confidence 3677789999998875 6899999999999999
Q ss_pred HHHcCceEEEEcCCC----CCCCCCEEeCCHhHHHHHHHHH
Q 020219 270 GKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAIPEL 306 (329)
Q Consensus 270 a~~~G~~~v~v~~~~----~~~~ad~i~~~l~el~~~l~~~ 306 (329)
|+++|+.++++.++. ....++++++++.++.+.+..+
T Consensus 416 Ak~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 416 AKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred HHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 999999999997764 2456899999999998887554
No 30
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.87 E-value=4.8e-21 Score=169.82 Aligned_cols=104 Identities=21% Similarity=0.407 Sum_probs=95.5
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 127 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
....++||+.++|+.|+ ++++++||++...+...++++|+..+|+.++++++.+.
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~---------------------- 146 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA---------------------- 146 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------------
Confidence 34678999999999884 77999999999999999999999999999999987765
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
.||+|++|+++++++|++|++|++|||+.+|+++|+++|+.+|++++.
T Consensus 147 --------------------------------~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 147 --------------------------------YKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred --------------------------------CCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 699999999999999999999999999999999999999999999875
Q ss_pred C
Q 020219 284 Q 284 (329)
Q Consensus 284 ~ 284 (329)
.
T Consensus 195 ~ 195 (198)
T TIGR01428 195 G 195 (198)
T ss_pred C
Confidence 4
No 31
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.86 E-value=8.6e-21 Score=178.48 Aligned_cols=198 Identities=20% Similarity=0.269 Sum_probs=132.7
Q ss_pred CCccEEEEeCCCCcccCc-ccHHHHHHHHHHHHHHHHhCCCc-h-hHHHHHHHHHHhhcccHHH----HHHcCCC-----
Q 020219 43 AKYDCLLFDLDDTLYPYS-SGIAAACGQNIKDYMVEKLGIER-S-KIEDLGNLLYKNYGTTMAG----LRAIGYD----- 110 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~~gi~~-~-~~~~~~~~~~~~~g~~~~~----l~~~~~~----- 110 (329)
+.+++|+|||||||+|+. ..+..++.+ ..+..|++. . ..+. ...+.. .|..... +...+..
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 110 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVEL-YDELLN-IGGGKERMTWYFNENGWPTSTIE 110 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHH-HHHHHc-cCCChHHHHHHHHHcCCCccccc
Confidence 568999999999999988 777778775 344567632 1 1111 111111 2211110 1111111
Q ss_pred ---CCH---H----HHH----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcccc---
Q 020219 111 ---FDY---D----DYH----SFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF--- 170 (329)
Q Consensus 111 ---~~~---~----~~~----~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f--- 170 (329)
... + .+. +.+........+.++||+.++|+.| +++++++||+....+...++.++...+|
T Consensus 111 ~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~ 190 (286)
T PLN02779 111 KAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL 190 (286)
T ss_pred cCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce
Confidence 011 1 111 1111111112368899999999877 5889999999999888888877433334
Q ss_pred ceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHc
Q 020219 171 EGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA 250 (329)
Q Consensus 171 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~ 250 (329)
+.+ ++++.+. .||+|++|..+++++
T Consensus 191 ~~v-~~~~~~~------------------------------------------------------~KP~p~~~~~a~~~~ 215 (286)
T PLN02779 191 DVF-AGDDVPK------------------------------------------------------KKPDPDIYNLAAETL 215 (286)
T ss_pred EEE-eccccCC------------------------------------------------------CCCCHHHHHHHHHHh
Confidence 333 4444332 699999999999999
Q ss_pred CCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCC----CCCCCEEeCCHhHHHHH
Q 020219 251 SINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR----VKGADYAFESIHNIKEA 302 (329)
Q Consensus 251 ~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~ad~i~~~l~el~~~ 302 (329)
+++|++|++|||+.+|+++|+++|+.+|++.++.. ...++++++++.++...
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 99999999999999999999999999999977642 34699999999997643
No 32
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.86 E-value=1.1e-20 Score=165.09 Aligned_cols=170 Identities=22% Similarity=0.342 Sum_probs=121.2
Q ss_pred ccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH-----HHHcCCCCCHHHHHH-
Q 020219 45 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-----LRAIGYDFDYDDYHS- 118 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~-----l~~~~~~~~~~~~~~- 118 (329)
+++|+||+||||+|+...+..++.. +.++.|.+... . ......|..... +...+...+.+.+.+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--Q---YNTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--H---HHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4789999999999988777666664 44556665321 1 111112322211 111111233332221
Q ss_pred ------HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 119 ------FVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 119 ------~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
.+...+......++||+.++|+.| +++++++|++ ..+..+++++|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 222211124578999999999887 4778899987 667889999999999999998876654
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
.||+|+++++++++++++|+++++|||+.+|+++
T Consensus 141 ----------------------------------------------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 141 ----------------------------------------------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQA 174 (185)
T ss_pred ----------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHH
Confidence 6999999999999999999999999999999999
Q ss_pred HHHcCceEEEE
Q 020219 270 GKRVGLDTVLI 280 (329)
Q Consensus 270 a~~~G~~~v~v 280 (329)
|+++|+.++.|
T Consensus 175 A~~~G~~~i~v 185 (185)
T TIGR02009 175 ARAAGMFAVAV 185 (185)
T ss_pred HHHCCCeEeeC
Confidence 99999998864
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.86 E-value=5.2e-21 Score=167.06 Aligned_cols=169 Identities=22% Similarity=0.255 Sum_probs=119.6
Q ss_pred EEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH-----HHHHcCCCCCHHHHHH---
Q 020219 47 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA-----GLRAIGYDFDYDDYHS--- 118 (329)
Q Consensus 47 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~-----~l~~~~~~~~~~~~~~--- 118 (329)
+|+||+||||+|+...+..++.+ +.+.+|++..... .....|.... .+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEF-----NESLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 48999999999988888887775 4555676533211 0111222111 1112233333222211
Q ss_pred ----HHhccCC-CCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCC
Q 020219 119 ----FVHGRLP-YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 190 (329)
Q Consensus 119 ----~~~~~~~-~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 190 (329)
.+..... .....++||+.++|+.|+ ++++++|++.. ....++++|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~--------- 139 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK--------- 139 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence 1111111 123578999999999884 77889998643 4678999999999999998876654
Q ss_pred hhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHH
Q 020219 191 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a 270 (329)
.||+|++|++++++++++|++|++|||+.+|+++|
T Consensus 140 ---------------------------------------------~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA 174 (185)
T TIGR01990 140 ---------------------------------------------GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAI 174 (185)
T ss_pred ---------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHH
Confidence 69999999999999999999999999999999999
Q ss_pred HHcCceEEEEc
Q 020219 271 KRVGLDTVLIG 281 (329)
Q Consensus 271 ~~~G~~~v~v~ 281 (329)
+++|+.+|+++
T Consensus 175 ~~aG~~~i~v~ 185 (185)
T TIGR01990 175 KAAGMFAVGVG 185 (185)
T ss_pred HHcCCEEEecC
Confidence 99999999864
No 34
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.85 E-value=2.7e-20 Score=165.55 Aligned_cols=173 Identities=23% Similarity=0.301 Sum_probs=120.7
Q ss_pred cEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHH---HHh-------h----cccHH---------
Q 020219 46 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLL---YKN-------Y----GTTMA--------- 102 (329)
Q Consensus 46 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~---~~~-------~----g~~~~--------- 102 (329)
|+|+||+||||+|+...+..++.+ +.+++|++....+ +...+ +.. + |....
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 74 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDE-LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRD 74 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHH
Confidence 579999999999988888887775 4455777643221 11111 110 1 22211
Q ss_pred HHHHcCCCC--CHHHHHHHHhc-cCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeee
Q 020219 103 GLRAIGYDF--DYDDYHSFVHG-RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICF 176 (329)
Q Consensus 103 ~l~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~ 176 (329)
.+...+... ....+.+.+.. ........++||+.++|+.|+ ++++++||+... ....++++|+..+|+.++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 75 TFGRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHHhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 111122111 11112121111 111234578999999999884 778999998765 57788999999999999998
Q ss_pred ccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCc
Q 020219 177 ETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQR 256 (329)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e 256 (329)
++.+. .||+|++|+++++++|++|++
T Consensus 154 ~~~~~------------------------------------------------------~KP~~~~~~~~~~~~~~~~~~ 179 (203)
T TIGR02252 154 YEVGA------------------------------------------------------EKPDPKIFQEALERAGISPEE 179 (203)
T ss_pred cccCC------------------------------------------------------CCCCHHHHHHHHHHcCCChhH
Confidence 87664 799999999999999999999
Q ss_pred EEEEeCCh-hchHHHHHcCceEEE
Q 020219 257 TLFFEDSV-RNIQAGKRVGLDTVL 279 (329)
Q Consensus 257 ~l~VGDs~-~Di~~a~~~G~~~v~ 279 (329)
|++|||+. +|+++|+++|+.+|+
T Consensus 180 ~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 180 ALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EEEECCCchHHHHHHHHcCCeeeC
Confidence 99999998 899999999999874
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.84 E-value=1.8e-21 Score=166.29 Aligned_cols=168 Identities=31% Similarity=0.505 Sum_probs=120.8
Q ss_pred EEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH----H-HHcCCCCCHHHHHHHHhc
Q 020219 48 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L-RAIGYDFDYDDYHSFVHG 122 (329)
Q Consensus 48 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~----l-~~~~~~~~~~~~~~~~~~ 122 (329)
|+||+||||+++...+..++.. .+.++.+.+.. .+. +.+..+..... + ...+. ....+.+.+..
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-AEE----LRELFGKSYEEALERLLERFGI--DPEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-HHH----HHHHTTSHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-HHH----HHHHhCCCHHHHHHHhhhccch--hHHHHHHHhhh
Confidence 7999999999966655555443 33455554321 111 11111211111 0 00000 02223332322
Q ss_pred cCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHh
Q 020219 123 RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVES 199 (329)
Q Consensus 123 ~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (329)
........++||+.++|+.|+ ++++++|+++...+...++++|+..+|+.++++++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------ 131 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------ 131 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------
Confidence 211245788999999998874 88999999999999999999999999999999987775
Q ss_pred hhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEE
Q 020219 200 AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
.||++.+|+++++++|++|++|++|||+..|+++|+++|+.+|+
T Consensus 132 ------------------------------------~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~ 175 (176)
T PF13419_consen 132 ------------------------------------RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIW 175 (176)
T ss_dssp ------------------------------------STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred ------------------------------------hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEe
Confidence 69999999999999999999999999999999999999999998
Q ss_pred E
Q 020219 280 I 280 (329)
Q Consensus 280 v 280 (329)
+
T Consensus 176 v 176 (176)
T PF13419_consen 176 V 176 (176)
T ss_dssp E
T ss_pred C
Confidence 6
No 36
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.82 E-value=7.4e-20 Score=162.19 Aligned_cols=181 Identities=15% Similarity=0.156 Sum_probs=120.6
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH--HHHHcCCCCCHH---HHHH
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA--GLRAIGYDFDYD---DYHS 118 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~--~l~~~~~~~~~~---~~~~ 118 (329)
|+|+|+||+||||+|+...+ . ++.++.|++... +....|.... .....+ .+.+ ++.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~~-------~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~ 62 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTDH-------ILKMIQDERFRDPGELFG--CDQELAKKLIE 62 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHHH-------HHHHHhHhhhcCHHHHhc--ccHHHHHHHhh
Confidence 36999999999999944322 2 245667765321 1111221100 001111 1111 2222
Q ss_pred HHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccc----cceeeeeccCCCCCCCCCCCChh
Q 020219 119 FVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDC----FEGIICFETLNPTHKNTVSDDED 192 (329)
Q Consensus 119 ~~~~~~~~~~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~~~~~~~~~~ 192 (329)
.+..........++||+.++|+.|+ .+.+++|+.........++.+++..+ |+.++++++
T Consensus 63 ~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------- 128 (197)
T PHA02597 63 KYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------- 128 (197)
T ss_pred hhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------
Confidence 2221111244678999999999985 56778888777766667777887654 455665542
Q ss_pred hHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHH
Q 020219 193 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~ 272 (329)
.||+|++++++++++| |++|+||||+.+|+++|++
T Consensus 129 -------------------------------------------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~ 163 (197)
T PHA02597 129 -------------------------------------------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHE 163 (197)
T ss_pred -------------------------------------------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHH
Confidence 3677899999999999 8899999999999999999
Q ss_pred c--CceEEEEcCCCCCC--CCCEEeCCHhHHHH
Q 020219 273 V--GLDTVLIGKSQRVK--GADYAFESIHNIKE 301 (329)
Q Consensus 273 ~--G~~~v~v~~~~~~~--~ad~i~~~l~el~~ 301 (329)
+ |+++++++++.... .+++.+.++.|+..
T Consensus 164 a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 164 ALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred HHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 9 99999998886533 66688888888753
No 37
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.82 E-value=2.1e-20 Score=162.37 Aligned_cols=97 Identities=34% Similarity=0.493 Sum_probs=87.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
..++||+.++|+.| +++++++||+.... ...+.++|+..+|+.++++++.+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~------------------------ 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR------------------------ 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC------------------------
Confidence 68899999999887 47799999998887 666667999999999998876554
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEE
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
+||+|.+|+.++++++++|++|++|||+..|+++|+++|+.+|++
T Consensus 139 ------------------------------~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 139 ------------------------------GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred ------------------------------CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 799999999999999999999999999999999999999999874
No 38
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.82 E-value=1.2e-19 Score=162.45 Aligned_cols=101 Identities=18% Similarity=0.257 Sum_probs=86.0
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChhh--HHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhc
Q 020219 128 NLKPDPVLRSLLLSLP---LRKIIFTNADKVH--AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS 202 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (329)
...++||+.++|+.|+ ++++++||+.... ....+...++..+|+.++++++.+.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------------- 150 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------------- 150 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC---------------------
Confidence 5778999999998884 7889999976543 3334455678889999998876664
Q ss_pred cccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcC
Q 020219 203 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~ 282 (329)
+||+|.+|+.+++++|++|++|+||||+..|+.+|+++|+.++++.+
T Consensus 151 ---------------------------------~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 151 ---------------------------------RKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred ---------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 69999999999999999999999999999999999999999999543
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.81 E-value=4.1e-19 Score=159.69 Aligned_cols=200 Identities=16% Similarity=0.185 Sum_probs=126.8
Q ss_pred cccCCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH-----HHHHcCCCCCHH
Q 020219 40 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA-----GLRAIGYDFDYD 114 (329)
Q Consensus 40 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~-----~l~~~~~~~~~~ 114 (329)
+.+.++++++||+||||+++. ++. .+.+..|.+... ..+...... -..... ....+ .....+
T Consensus 9 ~~~~~~k~iiFD~DGTL~~~~-----~~~-----~l~~~~g~~~~~-~~~~~~~~~-g~~~~~~~~~~~~~~~-~~~~~~ 75 (219)
T TIGR00338 9 PLLRSKKLVVFDMDSTLINAE-----TID-----EIAKIAGVEEEV-SEITERAMR-GELDFKASLRERVALL-KGLPVE 75 (219)
T ss_pred hhhccCCEEEEeCcccCCCch-----HHH-----HHHHHhCCHHHH-HHHHHHHHc-CCCCHHHHHHHHHHHh-CCCCHH
Confidence 344567999999999999953 222 244555653221 111111111 011111 11111 112233
Q ss_pred HHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCCh
Q 020219 115 DYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 191 (329)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 191 (329)
.+.+.. ....++||+.++|+.| +++++++|++....+..+++++|+..+|+..+..++.. +.+
T Consensus 76 ~~~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~-~~~------- 141 (219)
T TIGR00338 76 LLKEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK-LTG------- 141 (219)
T ss_pred HHHHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE-EEE-------
Confidence 333322 3366899999999887 47899999999999999999999988886554433111 000
Q ss_pred hhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHH
Q 020219 192 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~ 271 (329)
.. ......++|++.+++.+++++++++++|+||||+.+|+++|+
T Consensus 142 --------------~~----------------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~ 185 (219)
T TIGR00338 142 --------------LV----------------------EGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIK 185 (219)
T ss_pred --------------Ee----------------------cCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHH
Confidence 00 000012577899999999999999999999999999999999
Q ss_pred HcCceEEEEcCCCCCCCCCEEeC--CHhHHHHH
Q 020219 272 RVGLDTVLIGKSQRVKGADYAFE--SIHNIKEA 302 (329)
Q Consensus 272 ~~G~~~v~v~~~~~~~~ad~i~~--~l~el~~~ 302 (329)
++|+.+++.+.......|++++. ++.++.+.
T Consensus 186 ~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 186 AAGLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred hCCCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 99998766443334568889877 45665543
No 40
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.81 E-value=3.2e-19 Score=193.16 Aligned_cols=194 Identities=21% Similarity=0.301 Sum_probs=144.7
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHH-----HcCC-CCCHHH-
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGY-DFDYDD- 115 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~-----~~~~-~~~~~~- 115 (329)
+++++|+|||||||+|+...+..++.+ +.++.|++.... . +....|....... ..+. ..+.+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e-~----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVE-D----FVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHH-H----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 478999999999999988888887775 445567754321 1 2223343332211 1111 122222
Q ss_pred ---HHHHHhccCC-CCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCc-cccceeeeeccCCCCCCCCC
Q 020219 116 ---YHSFVHGRLP-YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE-DCFEGIICFETLNPTHKNTV 187 (329)
Q Consensus 116 ---~~~~~~~~~~-~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~ 187 (329)
+.+.+..... .....++||+.++|++|+ ++++|+|+.....+...++++|+. .+|+.++++++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------ 216 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------ 216 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence 2222222111 122347899999999884 789999999999999999999996 78999999887664
Q ss_pred CCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhch
Q 020219 188 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 267 (329)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di 267 (329)
.||+|++|++++++++++|++|++|||+.+|+
T Consensus 217 ------------------------------------------------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di 248 (1057)
T PLN02919 217 ------------------------------------------------LKPAPDIFLAAAKILGVPTSECVVIEDALAGV 248 (1057)
T ss_pred ------------------------------------------------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHH
Confidence 69999999999999999999999999999999
Q ss_pred HHHHHcCceEEEEcCCCC-----CCCCCEEeCCHhHHH
Q 020219 268 QAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIK 300 (329)
Q Consensus 268 ~~a~~~G~~~v~v~~~~~-----~~~ad~i~~~l~el~ 300 (329)
++|+++|+.+|++.++.. ..+++++++++.++.
T Consensus 249 ~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 249 QAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred HHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 999999999999987752 568999999999974
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.80 E-value=1.9e-18 Score=153.62 Aligned_cols=119 Identities=16% Similarity=0.330 Sum_probs=95.7
Q ss_pred cCCCCCHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHh-cCCccccceeeeeccCCCC
Q 020219 107 IGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFETLNPT 182 (329)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~ 182 (329)
.+...+.+.+.+.+... ...++||+.++|+.| +++++++||++.......+.. .++..+|+.++++++.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~----~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~- 139 (199)
T PRK09456 65 MALSLSYEQFAHGWQAV----FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM- 139 (199)
T ss_pred hCCCCCHHHHHHHHHHH----HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC-
Confidence 34444444444444331 135789999999888 478999999987776665554 478889999999987775
Q ss_pred CCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 020219 183 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED 262 (329)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGD 262 (329)
+||+|++|+++++++|++|++|+||||
T Consensus 140 -----------------------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD 166 (199)
T PRK09456 140 -----------------------------------------------------RKPEARIYQHVLQAEGFSAADAVFFDD 166 (199)
T ss_pred -----------------------------------------------------CCCCHHHHHHHHHHcCCChhHeEEeCC
Confidence 799999999999999999999999999
Q ss_pred ChhchHHHHHcCceEEEEcCC
Q 020219 263 SVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 263 s~~Di~~a~~~G~~~v~v~~~ 283 (329)
+..|+++|+++|+.++++..+
T Consensus 167 ~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 167 NADNIEAANALGITSILVTDK 187 (199)
T ss_pred CHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999997664
No 42
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.78 E-value=7e-19 Score=152.71 Aligned_cols=89 Identities=21% Similarity=0.332 Sum_probs=81.3
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 127 ENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
....++||+.++|+ +++++||++...+...++++|+..+|+.++++++.+.
T Consensus 87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------- 137 (175)
T TIGR01493 87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA------------------------- 137 (175)
T ss_pred hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC-------------------------
Confidence 35678999999998 4789999999999999999999999999999886664
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
.||+|++|+.+++++|++|++|+||||+.+|+.+|+++
T Consensus 138 -----------------------------~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 -----------------------------YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred -----------------------------CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 69999999999999999999999999999999999864
No 43
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.78 E-value=6.2e-18 Score=150.05 Aligned_cols=88 Identities=25% Similarity=0.281 Sum_probs=77.8
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCC
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 207 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (329)
+.+++.++|+.| +++++++||++...+...++++|+..+|+.++++++..
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------------------- 159 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP--------------------------- 159 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC---------------------------
Confidence 344557777666 58899999999999999999999999999999987654
Q ss_pred CCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 208 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
.||+|+.+..+++++|+++++|++|||+.+|+++|+++
T Consensus 160 ----------------------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 ----------------------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred ----------------------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 49999999999999999999999999999999999874
No 44
>PLN02811 hydrolase
Probab=99.77 E-value=3.3e-18 Score=154.55 Aligned_cols=185 Identities=19% Similarity=0.226 Sum_probs=128.5
Q ss_pred CCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH----H-HHcCCC--CCHHHHHHHHhccC
Q 020219 52 LDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L-RAIGYD--FDYDDYHSFVHGRL 124 (329)
Q Consensus 52 lDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~----l-~~~~~~--~~~~~~~~~~~~~~ 124 (329)
|||||+|+...+..++.. +.+++|++... + ......|..... + ...+.+ ...+.+.+..+...
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-S----LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999988888887775 44556765321 1 122233443321 1 122322 12222222111100
Q ss_pred --CCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHH-HhcCCccccceeeeec--cCCCCCCCCCCCChhhHHH
Q 020219 125 --PYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVL-SRLGLEDCFEGIICFE--TLNPTHKNTVSDDEDDIAF 196 (329)
Q Consensus 125 --~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~~ 196 (329)
...+..++||+.++|+.| +++++++|+.........+ +..++.++|+.+++++ +.+.
T Consensus 71 ~~~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~--------------- 135 (220)
T PLN02811 71 QDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ--------------- 135 (220)
T ss_pred HHHHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC---------------
Confidence 123577899999999887 4789999998766554433 3347788999999987 4443
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC---CCCCcEEEEeCChhchHHHHHc
Q 020219 197 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS---INPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~---v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
+||+|++|.+++++++ ++|++|+||||+..|+++|+++
T Consensus 136 ---------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~a 176 (220)
T PLN02811 136 ---------------------------------------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNA 176 (220)
T ss_pred ---------------------------------------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHC
Confidence 6999999999999997 9999999999999999999999
Q ss_pred CceEEEEcCCC----CCCCCCEEeCCHhHHH
Q 020219 274 GLDTVLIGKSQ----RVKGADYAFESIHNIK 300 (329)
Q Consensus 274 G~~~v~v~~~~----~~~~ad~i~~~l~el~ 300 (329)
|+.+|++.++. ....++++++++.++.
T Consensus 177 G~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 177 GMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred CCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 99999997764 2347888888888754
No 45
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.76 E-value=1.2e-17 Score=141.97 Aligned_cols=151 Identities=23% Similarity=0.272 Sum_probs=108.1
Q ss_pred EEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHHcCCCCCHHHHHHHHhccCCC
Q 020219 47 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPY 126 (329)
Q Consensus 47 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 126 (329)
+|+||+||||+|+...+..++... .++.+..... +....|.....+.... ..+.+... ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~g~~~~~~~~~~-----~~~~~~~~---~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEET-----LEEFGEDFQA-------LKALRGLAEELLYRIA-----TSFEELLG---YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHH-----HHHhcccHHH-------HHHHHccChHHHHHHH-----HHHHHHhC---cc
Confidence 489999999999877777777753 3344542211 1112222211111110 11222211 11
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
.....+||+.++|+.| +++++++|++....+...++.+ +..+|+.++++++.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~----------------------- 116 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG----------------------- 116 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------------
Confidence 3455679999999888 4789999999999999999887 778899998876533
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcC
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 274 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G 274 (329)
+||+|+++.++++++++++ +|++|||+.+|+++|+++|
T Consensus 117 --------------------------------~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 --------------------------------AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --------------------------------CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 5999999999999999999 9999999999999999987
No 46
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.74 E-value=4.3e-17 Score=143.00 Aligned_cols=125 Identities=19% Similarity=0.213 Sum_probs=95.9
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------hhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCC
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 190 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 190 (329)
..++||+.++|++| +++++++||.+. ......++++|+ .|+.++.+.+....
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~-------- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED-------- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence 45678999999888 478899999763 233445666776 37877754321100
Q ss_pred hhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHH
Q 020219 191 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a 270 (329)
.....||+|.++.+++++++++|++|++|||+.+|+.+|
T Consensus 98 -----------------------------------------~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A 136 (181)
T PRK08942 98 -----------------------------------------GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAA 136 (181)
T ss_pred -----------------------------------------CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHH
Confidence 000169999999999999999999999999999999999
Q ss_pred HHcCceEEEEcCCCC-----CCCC--CEEeCCHhHHHHHHH
Q 020219 271 KRVGLDTVLIGKSQR-----VKGA--DYAFESIHNIKEAIP 304 (329)
Q Consensus 271 ~~~G~~~v~v~~~~~-----~~~a--d~i~~~l~el~~~l~ 304 (329)
+++|+.++++.++.. ...+ +++++++.++.+.+.
T Consensus 137 ~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 137 AAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 999999999977642 3356 899999999888764
No 47
>PLN02954 phosphoserine phosphatase
Probab=99.73 E-value=2.5e-16 Score=142.07 Aligned_cols=200 Identities=15% Similarity=0.186 Sum_probs=122.5
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHH-HHH-cC-CCCCHHHHHHHH
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRA-IG-YDFDYDDYHSFV 120 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~-l~~-~~-~~~~~~~~~~~~ 120 (329)
++|+|+||+||||++. .++. .+.+++|.+. ..+.+...+. ........ +.. .+ .....+.+.+.+
T Consensus 11 ~~k~viFDfDGTL~~~-----~~~~-----~~~~~~g~~~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (224)
T PLN02954 11 SADAVCFDVDSTVCVD-----EGID-----ELAEFCGAGE-AVAEWTAKAM-GGSVPFEEALAARLSLFKPSLSQVEEFL 78 (224)
T ss_pred cCCEEEEeCCCcccch-----HHHH-----HHHHHcCChH-HHHHHHHHHH-CCCCCHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4699999999999994 2222 2556666532 1122211111 10111111 111 00 111234444444
Q ss_pred hccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCc--cccceeeeeccCCCCCCCCCCCChhhHH
Q 020219 121 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSDDEDDIA 195 (329)
Q Consensus 121 ~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (329)
.. ....++||+.++|+.+ +.+++|+|++....+..+++.+|+. ..|+..+.....+.+.|.
T Consensus 79 ~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~---------- 144 (224)
T PLN02954 79 EK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGF---------- 144 (224)
T ss_pred HH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECc----------
Confidence 33 2356889999999887 4778999999999999999999996 345543332221110000
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCc
Q 020219 196 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 275 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~ 275 (329)
....| .+.+++||.+++.++++++. ++|++|||+.+|+++|+++|+
T Consensus 145 ------------------------~~~~~--------~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~ 190 (224)
T PLN02954 145 ------------------------DENEP--------TSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGA 190 (224)
T ss_pred ------------------------cCCCc--------ccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCC
Confidence 00000 01157788999999999885 689999999999999999888
Q ss_pred eEEEEcCCC-----CCCCCCEEeCCHhHHHHHH
Q 020219 276 DTVLIGKSQ-----RVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 276 ~~v~v~~~~-----~~~~ad~i~~~l~el~~~l 303 (329)
..+....+. ....++++++++.++.+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 191 DLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 765542221 2446899999999987754
No 48
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.72 E-value=1.7e-16 Score=140.07 Aligned_cols=113 Identities=14% Similarity=0.146 Sum_probs=87.8
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
+..++||+.++|+.| +++++++|++....+..+++++|+...|+..+..++.+.+.
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------------------- 136 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------------------- 136 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe---------------------
Confidence 367899999999888 47899999999999999999999988787766654333210
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~ 284 (329)
| .+.. . ...++++.+++++++++++++++|+||||+.+|+++|+.+|+.+++.+.+.
T Consensus 137 -----p------------~~~~-~-----~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 137 -----P------------DGIV-R-----VTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred -----c------------ceee-E-----EccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 0 0000 0 002456688999999999999999999999999999999999888866554
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.71 E-value=2.1e-16 Score=150.85 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=93.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
++.++||+.++|+.| +++++|+|++........++++|+...+...+...+ +...|
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~d-g~ltg-------------------- 237 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMD-GKLTG-------------------- 237 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEEC-CEEEe--------------------
Confidence 477899999999877 478999999998888889999998654543222211 10000
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~ 284 (329)
. .......+|||++.++++++++|+++++|++|||+.||++|++.+|+.+++-+.+.
T Consensus 238 -~----------------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~ 294 (322)
T PRK11133 238 -N----------------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPK 294 (322)
T ss_pred -E----------------------ecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHH
Confidence 0 00000126899999999999999999999999999999999999999999855555
Q ss_pred CCCCCCEEeC
Q 020219 285 RVKGADYAFE 294 (329)
Q Consensus 285 ~~~~ad~i~~ 294 (329)
-+..|+++++
T Consensus 295 Vk~~Ad~~i~ 304 (322)
T PRK11133 295 VNEQAQVTIR 304 (322)
T ss_pred HHhhCCEEec
Confidence 6889999986
No 50
>PRK06769 hypothetical protein; Validated
Probab=99.71 E-value=7.4e-17 Score=140.94 Aligned_cols=121 Identities=19% Similarity=0.217 Sum_probs=92.8
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChh--------hHHHHHHhcCCccccceee-eeccCCCCCCCCCCCChhhHHH
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKV--------HAVKVLSRLGLEDCFEGII-CFETLNPTHKNTVSDDEDDIAF 196 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~--------~~~~~l~~~gl~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 196 (329)
..++||+.++|++| +++++++||.... .....++.+|+..+|.... ++++.+.
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------- 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------- 91 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence 45679999999888 5789999997641 1333466667654433222 1222221
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCce
Q 020219 197 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~ 276 (329)
.||+|+++++++++++++|++|+||||+.+|+.+|+++|+.
T Consensus 92 ---------------------------------------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 92 ---------------------------------------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred ---------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 69999999999999999999999999999999999999999
Q ss_pred EEEEcCCCC------------CCCCCEEeCCHhHHHHHH
Q 020219 277 TVLIGKSQR------------VKGADYAFESIHNIKEAI 303 (329)
Q Consensus 277 ~v~v~~~~~------------~~~ad~i~~~l~el~~~l 303 (329)
+|++.++.. ...++++++++.++.+.|
T Consensus 133 ~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 133 TILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred EEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 999987641 346889999999988765
No 51
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.71 E-value=1.4e-16 Score=141.72 Aligned_cols=193 Identities=15% Similarity=0.097 Sum_probs=125.1
Q ss_pred ccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHH---HHHHhhcccHHHHHHcCCCCCHHHHHHHHh
Q 020219 45 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGN---LLYKNYGTTMAGLRAIGYDFDYDDYHSFVH 121 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~---~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 121 (329)
|+.|+|||||||++ . .+. .+.++.|++... .... .+...++.....+... ..+.+++.....
T Consensus 1 ~~~v~FD~DGTL~~--~----~~~-----~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~i~~~~~ 65 (205)
T PRK13582 1 MEIVCLDLEGVLVP--E----IWI-----AFAEKTGIPELR--ATTRDIPDYDVLMKQRLDILDEH--GLGLADIQEVIA 65 (205)
T ss_pred CeEEEEeCCCCChh--h----HHH-----HHHHHcCChHHH--HHhcCCCCHHHHHHHHHHHHHHc--CCCHHHHHHHHH
Confidence 47899999999994 1 222 245666764321 0000 0111222222223222 244566655553
Q ss_pred ccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHh
Q 020219 122 GRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVES 199 (329)
Q Consensus 122 ~~~~~~~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (329)
...++||+.++|+.|+ ++++++|++....+...++++|+..+|+..+...+.+...|
T Consensus 66 ------~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~--------------- 124 (205)
T PRK13582 66 ------TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITG--------------- 124 (205)
T ss_pred ------hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEEC---------------
Confidence 3677999999999885 67889999999999999999999888876655432221000
Q ss_pred hhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEE
Q 020219 200 AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
. .+++|.....+++.++..+++|++|||+.+|+++++++|+...
T Consensus 125 --------------------------------~---~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~- 168 (205)
T PRK13582 125 --------------------------------Y---DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL- 168 (205)
T ss_pred --------------------------------c---cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-
Confidence 0 1122334456666666677999999999999999999998654
Q ss_pred EcCCCC--CCCCCE-EeCCHhHHHHHHHHHHhc
Q 020219 280 IGKSQR--VKGADY-AFESIHNIKEAIPELWES 309 (329)
Q Consensus 280 v~~~~~--~~~ad~-i~~~l~el~~~l~~~~~~ 309 (329)
++.++. ...+++ +++++.++.+.+.++...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 169 FRPPANVIAEFPQFPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence 444432 334555 899999999998887653
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.71 E-value=1.5e-16 Score=139.20 Aligned_cols=127 Identities=17% Similarity=0.183 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------hhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCC
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 190 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 190 (329)
+.++||+.++|++| +++++++||.+. ......+.++++. |+.++.+......
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~-------- 94 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG-------- 94 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc--------
Confidence 55779999999887 478999999874 2334566666665 7776654321100
Q ss_pred hhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHH
Q 020219 191 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 270 (329)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a 270 (329)
.. ........+||+|.+|..+++++++++++|+||||+.+|+++|
T Consensus 95 -------------------~~----------------~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA 139 (176)
T TIGR00213 95 -------------------VE----------------EFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG 139 (176)
T ss_pred -------------------cc----------------cccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH
Confidence 00 0000011269999999999999999999999999999999999
Q ss_pred HHcCceE-EEEcCCCC-----CCCCCEEeCCHhHHH
Q 020219 271 KRVGLDT-VLIGKSQR-----VKGADYAFESIHNIK 300 (329)
Q Consensus 271 ~~~G~~~-v~v~~~~~-----~~~ad~i~~~l~el~ 300 (329)
+++|+.+ +++.++.. ...|+++++++.+|.
T Consensus 140 ~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 140 VAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 9999997 78887752 346999999999875
No 53
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.70 E-value=2.9e-16 Score=141.74 Aligned_cols=195 Identities=21% Similarity=0.230 Sum_probs=146.0
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHH-----HHcCCCCCHHHHH
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH 117 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l-----~~~~~~~~~~~~~ 117 (329)
..+.+++||+||||+|+...+..++.. +..++|...+. +. ..+..|....+. .....+...+++.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~-~~----~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~ 77 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPW-DV----KVKSMGKRTSEAARLFVKKLPDPVSREEFN 77 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChH-HH----HHHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence 346789999999999988877777774 66677764322 21 122344443222 2334666777776
Q ss_pred HHHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcC-CccccceeeeeccCCCCCCCCCCCCh
Q 020219 118 SFVHGRL--PYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLG-LEDCFEGIICFETLNPTHKNTVSDDE 191 (329)
Q Consensus 118 ~~~~~~~--~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~~~ 191 (329)
...+... ......+.||+.+|++.| ++++.++|+.+......+..+++ +...|+.++.+++-...
T Consensus 78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~--------- 148 (222)
T KOG2914|consen 78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVK--------- 148 (222)
T ss_pred HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCcccc---------
Confidence 6655432 236788899999999988 47899999998888999999887 67778888884332221
Q ss_pred hhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEeCChhchHHH
Q 020219 192 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAG 270 (329)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~-~e~l~VGDs~~Di~~a 270 (329)
.+||+|++|..+++.++..| +.|++|+|++..+++|
T Consensus 149 -------------------------------------------~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa 185 (222)
T KOG2914|consen 149 -------------------------------------------NGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAA 185 (222)
T ss_pred -------------------------------------------CCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHH
Confidence 17999999999999999998 9999999999999999
Q ss_pred HHcCceEEEEcCCC----CCCCCCEEeCCHhHH
Q 020219 271 KRVGLDTVLIGKSQ----RVKGADYAFESIHNI 299 (329)
Q Consensus 271 ~~~G~~~v~v~~~~----~~~~ad~i~~~l~el 299 (329)
+++|+.++++++.. -...++++++++.+.
T Consensus 186 ~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 186 KAAGMQVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred HhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence 99999999998844 256777777776654
No 54
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.69 E-value=2.5e-16 Score=142.89 Aligned_cols=181 Identities=18% Similarity=0.194 Sum_probs=123.2
Q ss_pred CCccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhc----------cc------HHH---
Q 020219 43 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYG----------TT------MAG--- 103 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g----------~~------~~~--- 103 (329)
+++|+|+||++|||+...+.....+.+ +.+.+|++... ..+...+.+.+. .. ...
T Consensus 5 ~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDD-SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCH-HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 468999999999999877777766663 66778877333 222222222221 00 000
Q ss_pred HHHcCCCC----CHHHHHHHHhccCC----CCCCCCChhHHHHHHhCCC---cEEEEeCCChhhHHHHHHhcCCccccce
Q 020219 104 LRAIGYDF----DYDDYHSFVHGRLP----YENLKPDPVLRSLLLSLPL---RKIIFTNADKVHAVKVLSRLGLEDCFEG 172 (329)
Q Consensus 104 l~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~pgv~~lL~~L~~---~~~ivT~~~~~~~~~~l~~~gl~~~f~~ 172 (329)
+....+.. ..++..+.+..+.. .......+++.++|+.+|. ++.++||.+.. .+..+..+|+..+||.
T Consensus 79 lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~ 157 (237)
T KOG3085|consen 79 LVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDF 157 (237)
T ss_pred HHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhh
Confidence 00000000 01111111111111 1245667788899999863 45677775555 5588889999999999
Q ss_pred eeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCC
Q 020219 173 IICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI 252 (329)
Q Consensus 173 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v 252 (329)
++.+...+. .||+|.+|+.+++.+++
T Consensus 158 vv~S~e~g~------------------------------------------------------~KPDp~If~~al~~l~v 183 (237)
T KOG3085|consen 158 VVESCEVGL------------------------------------------------------EKPDPRIFQLALERLGV 183 (237)
T ss_pred hhhhhhhcc------------------------------------------------------CCCChHHHHHHHHHhCC
Confidence 999988876 79999999999999999
Q ss_pred CCCcEEEEeCCh-hchHHHHHcCceEEEEcCCC
Q 020219 253 NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 253 ~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~ 284 (329)
.|++|++|||+. ||+++|+++|+.++++..+.
T Consensus 184 ~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 184 KPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred ChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 999999999999 89999999999999987553
No 55
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.69 E-value=6.7e-16 Score=139.45 Aligned_cols=130 Identities=14% Similarity=0.160 Sum_probs=93.1
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
.+..++||+.++|+.+ +++++|+|++....+..+++++ +.. +.+++...... +
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~--~------------------- 126 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFS--G------------------- 126 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEec--C-------------------
Confidence 3478899999999877 4789999999999999999987 643 33333210000 0
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHH----------HHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA----------IEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~----------~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
+ .+ . ..||+|.. ...++++++..+++|+||||+.+|+++|+++
T Consensus 127 ----~--~~-~--------------------~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~A 179 (219)
T PRK09552 127 ----E--YI-T--------------------ITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQA 179 (219)
T ss_pred ----C--ee-E--------------------EeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHC
Confidence 0 00 0 02333322 3468888999999999999999999999999
Q ss_pred CceEEEEcCC-----CCCCCCCEEeCCHhHHHHHHHHHHhc
Q 020219 274 GLDTVLIGKS-----QRVKGADYAFESIHNIKEAIPELWES 309 (329)
Q Consensus 274 G~~~v~v~~~-----~~~~~ad~i~~~l~el~~~l~~~~~~ 309 (329)
|+..+ ... .....+.+.++++.|+.+.|+++++.
T Consensus 180 g~~~a--~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~~ 218 (219)
T PRK09552 180 DKVFA--RDFLITKCEELGIPYTPFETFHDVQTELKHLLEV 218 (219)
T ss_pred Cccee--HHHHHHHHHHcCCCccccCCHHHHHHHHHHHhcc
Confidence 99444 211 13556888899999999999999874
No 56
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.68 E-value=1.1e-16 Score=135.94 Aligned_cols=48 Identities=33% Similarity=0.488 Sum_probs=46.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
.||+|++++++++++++++++|+||||+..|+++|+++|+++++++++
T Consensus 100 ~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 699999999999999999999999999999999999999999999864
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.65 E-value=6.6e-15 Score=133.44 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=86.6
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhc---CCccccceeeeeccCCCCCCCCCCCChhhHHHHHhh
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA 200 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (329)
.+..++||+.++|++| +++++|+||++.......++.. ++.++|+..+.. ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g-------------------- 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG-------------------- 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence 4567899999999988 4789999999988888777775 566777776632 111
Q ss_pred hccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEE
Q 020219 201 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
.||+|+.|.++++++|++|++|+||||+..|+++|+++|+.++++
T Consensus 151 -----------------------------------~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v 195 (220)
T TIGR01691 151 -----------------------------------LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQL 195 (220)
T ss_pred -----------------------------------cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 599999999999999999999999999999999999999999998
Q ss_pred cCCC
Q 020219 281 GKSQ 284 (329)
Q Consensus 281 ~~~~ 284 (329)
.++.
T Consensus 196 ~r~g 199 (220)
T TIGR01691 196 VRPG 199 (220)
T ss_pred ECCC
Confidence 7665
No 58
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.64 E-value=8.4e-15 Score=133.46 Aligned_cols=207 Identities=21% Similarity=0.267 Sum_probs=140.5
Q ss_pred EEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHH-----HHhhcccHHHHHHcCCCCCHHHHHHHHh
Q 020219 47 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLL-----YKNYGTTMAGLRAIGYDFDYDDYHSFVH 121 (329)
Q Consensus 47 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~-----~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 121 (329)
+++||+|+||++.+...+ +.+..+.... ...+...+ .+........+...+ ...+++.+.+.
T Consensus 2 LvvfDFD~TIvd~dsd~~----------v~~~l~~~~~-~~~l~~~~~~~~wt~~m~~vl~~L~~~g--vt~~~I~~~l~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDW----------VIELLPPEEL-PEELRESYPKGGWTEYMDRVLQLLHEQG--VTPEDIRDALR 68 (234)
T ss_pred EEEEeCCCCccCCccHHH----------HHHhcCCccc-HHHHHHhccccchHHHHHHHHHHHHHcC--CCHHHHHHHHH
Confidence 689999999998665431 2233332211 11111111 111222233343333 55777777774
Q ss_pred ccCCCCCCCCChhHHHHHHhC-----CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHH
Q 020219 122 GRLPYENLKPDPVLRSLLLSL-----PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAF 196 (329)
Q Consensus 122 ~~~~~~~~~~~pgv~~lL~~L-----~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (329)
.+++.||+.++++.+ +..++|+|+++..++..+|++.|+...|+.|++.
T Consensus 69 ------~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TN-------------------- 122 (234)
T PF06888_consen 69 ------SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTN-------------------- 122 (234)
T ss_pred ------cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeC--------------------
Confidence 488889999999888 3558999999999999999999999999999875
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHH---cCCCCCcEEEEeCChhchHHHHHc
Q 020219 197 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKI---ASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~---~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
++..+..+.+.+.|++.|.|+.| |.++ || ..+++++++. .|+..++++||||+.||+..+.+.
T Consensus 123 -------pa~~~~~G~l~v~pyh~h~C~~C---~~Nm--CK--~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L 188 (234)
T PF06888_consen 123 -------PACFDADGRLRVRPYHSHGCSLC---PPNM--CK--GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRL 188 (234)
T ss_pred -------CceecCCceEEEeCccCCCCCcC---CCcc--ch--HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccccc
Confidence 44555566788999999999988 3332 44 3577777776 478889999999999999999998
Q ss_pred Cce-EEEEcCCCC------C----CCC-CEEeCCHhHHHHHHHHH
Q 020219 274 GLD-TVLIGKSQR------V----KGA-DYAFESIHNIKEAIPEL 306 (329)
Q Consensus 274 G~~-~v~v~~~~~------~----~~a-d~i~~~l~el~~~l~~~ 306 (329)
+-. .++..+++. + -.| -....+-+|+.+.|.++
T Consensus 189 ~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 189 RPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQL 233 (234)
T ss_pred CCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhh
Confidence 766 555555541 1 122 23456666677666654
No 59
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.63 E-value=2.7e-15 Score=124.65 Aligned_cols=95 Identities=25% Similarity=0.381 Sum_probs=78.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC--------hhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHH
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNAD--------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 198 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
.++|++.++|+.| +++++++||.. ...+...++++|+. ++.++... +.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 4567788877776 57899999998 77788899999986 44444332 21
Q ss_pred hhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHc-CCCCCcEEEEeC-ChhchHHHHHcCce
Q 020219 199 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA-SINPQRTLFFED-SVRNIQAGKRVGLD 276 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~-~v~~~e~l~VGD-s~~Di~~a~~~G~~ 276 (329)
.||+|++|+++++++ +++|++++|||| +.+|+.+|+++|+.
T Consensus 84 -------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 84 -------------------------------------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -------------------------------------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 699999999999999 599999999999 68999999999999
Q ss_pred EEEEcC
Q 020219 277 TVLIGK 282 (329)
Q Consensus 277 ~v~v~~ 282 (329)
+|++++
T Consensus 127 ~i~~~~ 132 (132)
T TIGR01662 127 FILVAP 132 (132)
T ss_pred EEEeeC
Confidence 999863
No 60
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.63 E-value=3.7e-16 Score=136.53 Aligned_cols=103 Identities=18% Similarity=0.241 Sum_probs=89.4
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCC-ChhhHHHHHHhcCCc---------cccceeeeeccCCCCCCCCCCCChhh
Q 020219 127 ENLKPDPVLRSLLLSLP---LRKIIFTNA-DKVHAVKVLSRLGLE---------DCFEGIICFETLNPTHKNTVSDDEDD 193 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L~---~~~~ivT~~-~~~~~~~~l~~~gl~---------~~f~~i~~~~~~~~~~~~~~~~~~~~ 193 (329)
....++||+.++|+.|+ ++++++|++ ....+...+..+|+. ++|+.++++++...
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 45788999999999884 778999988 788888999999998 99999998764321
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHc--CCCCCcEEEEeCChhchHHHH
Q 020219 194 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA--SINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~--~v~~~e~l~VGDs~~Di~~a~ 271 (329)
.||.+.+++++.+.+ +++|++|+||||+..|+++|+
T Consensus 110 ------------------------------------------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~ 147 (174)
T TIGR01685 110 ------------------------------------------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVW 147 (174)
T ss_pred ------------------------------------------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHH
Confidence 577778888888877 899999999999999999999
Q ss_pred HcCceEEEEcCC
Q 020219 272 RVGLDTVLIGKS 283 (329)
Q Consensus 272 ~~G~~~v~v~~~ 283 (329)
++|+.++++.++
T Consensus 148 ~aGi~~i~v~~g 159 (174)
T TIGR01685 148 GYGVTSCYCPSG 159 (174)
T ss_pred HhCCEEEEcCCC
Confidence 999999999876
No 61
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.62 E-value=7.2e-15 Score=131.68 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=120.9
Q ss_pred cEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHHHHHHcCCCCCHHHHHHHHhccCC
Q 020219 46 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLP 125 (329)
Q Consensus 46 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 125 (329)
.+++|||||||++. .|. ++..+.|+............+..+......+... ...+.+.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~~---- 65 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVIA---- 65 (203)
T ss_pred eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHHH----
Confidence 57999999999973 222 2455667533221110001111111111111111 1345666666553
Q ss_pred CCCCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 126 YENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 126 ~~~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
.+.++||+.++|+.++ .+++++|++....+..+++++|++..|...+..++.+.+.|..
T Consensus 66 --~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~----------------- 126 (203)
T TIGR02137 66 --TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQ----------------- 126 (203)
T ss_pred --hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECee-----------------
Confidence 3678999999998874 5789999999999999999999987776543333212211100
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
...++.+......+++.+. +|++|||+.||+.|++.+|.++++.+.+
T Consensus 127 ------------------------------~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~ 173 (203)
T TIGR02137 127 ------------------------------LRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPE 173 (203)
T ss_pred ------------------------------ecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence 0023333334444455553 7999999999999999999999998877
Q ss_pred CC-CCCCCE-EeCCHhHHHHHHHHH
Q 020219 284 QR-VKGADY-AFESIHNIKEAIPEL 306 (329)
Q Consensus 284 ~~-~~~ad~-i~~~l~el~~~l~~~ 306 (329)
.. ...+++ ++.+.+++...+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 174 NVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHhCCCCCcccCHHHHHHHHHHH
Confidence 63 334443 788899988887665
No 62
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.61 E-value=2.3e-14 Score=125.04 Aligned_cols=122 Identities=16% Similarity=0.159 Sum_probs=87.1
Q ss_pred CHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCC
Q 020219 112 DYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVS 188 (329)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 188 (329)
..+.+.+.+. +..++||+.++|+.| +++++++|++....+...++++|+..+|+.+++++....
T Consensus 60 ~~~~~~~~~~------~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~------- 126 (188)
T TIGR01489 60 KEDEILEVLK------SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD------- 126 (188)
T ss_pred CHHHHHHHHH------hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-------
Confidence 3445555443 367889999999877 478999999999999999999999999999998653321
Q ss_pred CChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchH
Q 020219 189 DDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQ 268 (329)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~ 268 (329)
+.+.+...++-|++|... + .+.+|+.+++++++++ +++++||||+.+|++
T Consensus 127 --------------------~~g~~~~~~~~~~~~~~~---~----~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~ 176 (188)
T TIGR01489 127 --------------------NDGRHIVWPHHCHGCCSC---P----CGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVC 176 (188)
T ss_pred --------------------CCCcEEEecCCCCccCcC---C----CCCCHHHHHHHHHhhc---CceEEEECCCcchhc
Confidence 112222222222222221 1 1456688899888765 799999999999999
Q ss_pred HHHHcCce
Q 020219 269 AGKRVGLD 276 (329)
Q Consensus 269 ~a~~~G~~ 276 (329)
+|+++++.
T Consensus 177 aa~~~d~~ 184 (188)
T TIGR01489 177 PAKLSDVV 184 (188)
T ss_pred hHhcCCcc
Confidence 99998654
No 63
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.60 E-value=3.1e-15 Score=129.29 Aligned_cols=100 Identities=19% Similarity=0.320 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCC---------------hhhHHHHHHhcCCccccceeeee-----ccCCCCCCC
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNAD---------------KVHAVKVLSRLGLEDCFEGIICF-----ETLNPTHKN 185 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~---------------~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~~~ 185 (329)
+.++||+.++|+.| +++++++||.+ ...+...++.+|+. |+.++.+ ++.+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~---- 101 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC---- 101 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence 56789999999888 47899999963 44667788999986 8766543 32222
Q ss_pred CCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChh
Q 020219 186 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR 265 (329)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~ 265 (329)
.||++.+++.+++++++++++|+||||+.+
T Consensus 102 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~ 131 (161)
T TIGR01261 102 --------------------------------------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRET 131 (161)
T ss_pred --------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHH
Confidence 699999999999999999999999999999
Q ss_pred chHHHHHcCceEEEEcCCC
Q 020219 266 NIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 266 Di~~a~~~G~~~v~v~~~~ 284 (329)
|+++|+++|+.++++.+++
T Consensus 132 Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 132 DMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred HHHHHHHCCCeEEEEChhh
Confidence 9999999999999998875
No 64
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.58 E-value=2e-14 Score=129.61 Aligned_cols=193 Identities=15% Similarity=0.128 Sum_probs=127.2
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHH--hhcccHHHHHHcCCCCCHHHHHHHHh
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYK--NYGTTMAGLRAIGYDFDYDDYHSFVH 121 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~--~~g~~~~~l~~~~~~~~~~~~~~~~~ 121 (329)
+.++++|||||||++ ..++. ++.+..|....-.......... .+..+.......-...+.+.+.+...
T Consensus 4 ~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~ 73 (212)
T COG0560 4 MKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVRE 73 (212)
T ss_pred ccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 458999999999998 33322 2445555433221111100000 11111111112223334455554443
Q ss_pred ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHH
Q 020219 122 GRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 198 (329)
Q Consensus 122 ~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
.. ++++||+.++++.+ +.+++++|++....+..+.+++|++..+...+..++ +.++|..+
T Consensus 74 ~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG~v~----------- 136 (212)
T COG0560 74 EF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTGRVV----------- 136 (212)
T ss_pred hc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEeceee-----------
Confidence 21 78899999998877 588999999999999999999999988888877776 44433111
Q ss_pred hhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEE
Q 020219 199 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV 278 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v 278 (329)
...+.++-|...++.+++++|+++++++++|||.||+.|.+.+|.+.+
T Consensus 137 --------------------------------g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia 184 (212)
T COG0560 137 --------------------------------GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184 (212)
T ss_pred --------------------------------eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeE
Confidence 111235677899999999999999999999999999999999999988
Q ss_pred EEcCCCCCCCCCEEeCC
Q 020219 279 LIGKSQRVKGADYAFES 295 (329)
Q Consensus 279 ~v~~~~~~~~ad~i~~~ 295 (329)
.-+.+.-.+.++.....
T Consensus 185 ~n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 185 VNPKPKLRALADVRIWP 201 (212)
T ss_pred eCcCHHHHHHHHHhcCh
Confidence 87766544444443333
No 65
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.56 E-value=4.6e-14 Score=129.17 Aligned_cols=97 Identities=15% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCC----ChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHh
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNA----DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVES 199 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (329)
....+.+++.++|+.+ +++++++|+. ....+..+++.+|+..+|+.++++++...
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------ 172 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------ 172 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------
Confidence 4456778899999887 5789999997 55678888889999999998888764432
Q ss_pred hhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEE
Q 020219 200 AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
.||++. .+++++++ ++||||+.+|+.+|+++|+.++.
T Consensus 173 ------------------------------------~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~ 209 (237)
T TIGR01672 173 ------------------------------------YQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIR 209 (237)
T ss_pred ------------------------------------CCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEE
Confidence 466654 45677776 79999999999999999999999
Q ss_pred EcCCC
Q 020219 280 IGKSQ 284 (329)
Q Consensus 280 v~~~~ 284 (329)
+.++.
T Consensus 210 V~~g~ 214 (237)
T TIGR01672 210 ILRAS 214 (237)
T ss_pred EEecC
Confidence 98775
No 66
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.56 E-value=1.9e-14 Score=117.19 Aligned_cols=116 Identities=23% Similarity=0.299 Sum_probs=89.3
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 127 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
....++|++.++|+.|+ ++++++|++....+..+++++|+...++.+++..+........ .
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------~ 84 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKE----------------G 84 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccc----------------c
Confidence 45778899999988874 6789999999999999999999988888888776444210000 0
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEE
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
.... ......+||++..+..++++++.+++++++|||+.+|+++++++|+.++++
T Consensus 85 ~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 85 LFLG----------------------GGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cccc----------------------ccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 0000 001112699999999999999999999999999999999999999988764
No 67
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.55 E-value=1.4e-14 Score=134.31 Aligned_cols=68 Identities=16% Similarity=0.314 Sum_probs=61.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCC--------CCCCCCEEeCCHhHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ--------RVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~--------~~~~ad~i~~~l~el~~~l 303 (329)
+||+|.+++.++++++++|++|+||||+. +|+.+|+++|+.++++.++. ....|+++++++.++.+.|
T Consensus 178 gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred cCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 79999999999999999999999999997 89999999999999998773 1457899999999998764
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.53 E-value=1.1e-13 Score=124.61 Aligned_cols=128 Identities=13% Similarity=0.164 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
+..++||+.++|+.+ +.+++|+|++....+..+++.++.. +.+++.+..-.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~----------------------- 121 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFS----------------------- 121 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEee-----------------------
Confidence 468899999999887 4789999999999999999887543 33332210000
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHH----------HHHHHHHcCCCCCcEEEEeCChhchHHHHHcC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA----------IEKALKIASINPQRTLFFEDSVRNIQAGKRVG 274 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~----------~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G 274 (329)
.+ . +.+ .||.|.. ...++++++..+++++||||+.+|+++|+.+|
T Consensus 122 --~~--~-~~~--------------------~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad 176 (214)
T TIGR03333 122 --NE--Y-IHI--------------------DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSD 176 (214)
T ss_pred --CC--e-eEE--------------------eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCC
Confidence 00 0 000 2232222 24556666678899999999999999999999
Q ss_pred ceEEEEcCC-----CCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 275 LDTVLIGKS-----QRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 275 ~~~v~v~~~-----~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
+ +++... .....+.+.+.++.|+.+.|+++++
T Consensus 177 ~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 177 L--CFARDYLLNECEELGLNHAPFQDFYDVRKELENVKE 213 (214)
T ss_pred e--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHhc
Confidence 7 333321 2355577889999999999988876
No 69
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.52 E-value=2.9e-13 Score=124.90 Aligned_cols=64 Identities=25% Similarity=0.370 Sum_probs=57.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCC------C--CCCCEEeCCHhHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR------V--KGADYAFESIHNI 299 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~------~--~~ad~i~~~l~el 299 (329)
+||+|.+++.+++.+++++++++||||+. +|+.+|+++|+.++++.++.. . ..|+++++++.++
T Consensus 177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 79999999999999999999999999997 899999999999999988752 1 4689999988763
No 70
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.52 E-value=3.9e-14 Score=123.06 Aligned_cols=93 Identities=20% Similarity=0.236 Sum_probs=75.5
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChh------------hHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHH
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNADKV------------HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA 195 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~~~------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (329)
++||+.++|+.| +++++++||++.. .+...++++|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 568889988877 5789999997653 467788999985 355555542211
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEeCCh--------h
Q 020219 196 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSV--------R 265 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~--v~~~e~l~VGDs~--------~ 265 (329)
+||+|.++++++++++ +++++++||||+. +
T Consensus 107 ----------------------------------------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~ 146 (166)
T TIGR01664 107 ----------------------------------------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDA 146 (166)
T ss_pred ----------------------------------------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchh
Confidence 6999999999999999 9999999999996 6
Q ss_pred chHHHHHcCceEEE
Q 020219 266 NIQAGKRVGLDTVL 279 (329)
Q Consensus 266 Di~~a~~~G~~~v~ 279 (329)
|+++|+++|+.+++
T Consensus 147 Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 147 DIKFAKNLGLEFKY 160 (166)
T ss_pred HHHHHHHCCCCcCC
Confidence 99999999998764
No 71
>PRK10444 UMP phosphatase; Provisional
Probab=99.52 E-value=5.6e-13 Score=123.03 Aligned_cols=64 Identities=27% Similarity=0.407 Sum_probs=59.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCC--------CCCCCEEeCCHhHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI 299 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~ad~i~~~l~el 299 (329)
+||+|.+++.+++++++++++|+||||+. +|+.+|+++|+.++++.+|.. ...|+++++++.++
T Consensus 173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 89999999999999999999999999997 899999999999999988852 36799999999887
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.52 E-value=6.1e-13 Score=117.96 Aligned_cols=110 Identities=13% Similarity=0.060 Sum_probs=83.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
..++|++.++++.+ +.+++++|++....+..+++++|++..|...+...+.+.+.|..
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~------------------- 146 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNI------------------- 146 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCc-------------------
Confidence 46789999999876 47899999999999999999999987766533221112211100
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
....+.+++|...++.++++.++++++|+++|||.+|+++++.+|...+..+
T Consensus 147 ------------------------~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 147 ------------------------DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ------------------------cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 0011236788889999999999999999999999999999999998776644
No 73
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.48 E-value=3.3e-14 Score=123.83 Aligned_cols=97 Identities=18% Similarity=0.178 Sum_probs=83.7
Q ss_pred HHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCccccc
Q 020219 136 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 215 (329)
Q Consensus 136 ~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (329)
..+|++.++++.++|+.....+...++.+|+..+|+.
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~------------------------------------------- 79 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG------------------------------------------- 79 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-------------------------------------------
Confidence 3446677899999999999999999999999866652
Q ss_pred ccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeC
Q 020219 216 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFE 294 (329)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~ 294 (329)
.||+|..++.+++++++++++|++|||+.||++|++.+|++.++.+... .+..|++++.
T Consensus 80 --------------------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 80 --------------------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred --------------------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence 3788899999999999999999999999999999999999999886544 4777888876
Q ss_pred C
Q 020219 295 S 295 (329)
Q Consensus 295 ~ 295 (329)
+
T Consensus 140 ~ 140 (169)
T TIGR02726 140 A 140 (169)
T ss_pred C
Confidence 4
No 74
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.47 E-value=1.8e-12 Score=121.53 Aligned_cols=64 Identities=34% Similarity=0.460 Sum_probs=57.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCC--------------CCCCCEEeCCHhHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------------VKGADYAFESIHNI 299 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------------~~~ad~i~~~l~el 299 (329)
+||+|.++++++++++++|++|+||||+. +||.+|+++|++++++.+|.. ...||++++++.++
T Consensus 201 gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 201 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred CCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 79999999999999999999999999996 999999999999999988742 13699999998764
No 75
>PLN02645 phosphoglycolate phosphatase
Probab=99.47 E-value=2.5e-12 Score=122.46 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=62.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCC----------CCCCCEEeCCHhHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR----------VKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~----------~~~ad~i~~~l~el~~~l~ 304 (329)
+||+|.+++.+++++++++++++||||+. +|+.+|+++|++++++.+|.. ...||++++++.++.+++.
T Consensus 229 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 229 GKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 79999999999999999999999999998 999999999999999987742 2579999999999887653
No 76
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.46 E-value=6.9e-14 Score=119.92 Aligned_cols=112 Identities=16% Similarity=0.227 Sum_probs=90.2
Q ss_pred HHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCccccc
Q 020219 136 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 215 (329)
Q Consensus 136 ~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (329)
.+.|++-+++++++|+.+...+...++++|+..+|+.
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------------------------------- 73 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------------------------------- 73 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-------------------------------------------
Confidence 4446667899999999999999999999998766541
Q ss_pred ccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcC-CCCCCCCCEEeC
Q 020219 216 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFE 294 (329)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~-~~~~~~ad~i~~ 294 (329)
.||+++.+.++++++++++++|+||||+.+|+++++.+|+..++.+. ......|++++.
T Consensus 74 --------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~ 133 (154)
T TIGR01670 74 --------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTR 133 (154)
T ss_pred --------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEec
Confidence 36778999999999999999999999999999999999998444333 234667899998
Q ss_pred CHhH---HHHHHHHHHhcc
Q 020219 295 SIHN---IKEAIPELWESD 310 (329)
Q Consensus 295 ~l~e---l~~~l~~~~~~~ 310 (329)
+... +.+.++++++..
T Consensus 134 ~~~~~g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 134 IAGGRGAVREVCELLLLAQ 152 (154)
T ss_pred CCCCCcHHHHHHHHHHHhh
Confidence 7754 677777776643
No 77
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.45 E-value=3.3e-12 Score=118.63 Aligned_cols=71 Identities=28% Similarity=0.400 Sum_probs=64.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCC--------CCCCCEEeCCHhHHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIPEL 306 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~ad~i~~~l~el~~~l~~~ 306 (329)
|||++.+++.++++++..++++++|||+. +||.+|+++|+.+++|.+|-. ...++++++++.++...++++
T Consensus 189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~~ 268 (269)
T COG0647 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKEL 268 (269)
T ss_pred CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhcc
Confidence 99999999999999999999999999999 799999999999999988853 568899999999988876543
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.44 E-value=9.6e-13 Score=113.93 Aligned_cols=105 Identities=16% Similarity=0.208 Sum_probs=77.9
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
+++.++||+.++++.+ +.+++++|++....+..+++++|+...|...+...+.+.+.|.
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~------------------ 131 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGP------------------ 131 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCc------------------
Confidence 3466789999999877 4779999999999999999999998777666555322221110
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 273 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~ 273 (329)
+. .+....+..|+..+++++++++++++++++|||+.+|+++++.+
T Consensus 132 ---------------~~---------~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 132 ---------------IE---------GQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ---------------cC---------CcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 00 00011246677899999999999999999999999999999864
No 79
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.42 E-value=1.9e-12 Score=124.88 Aligned_cols=116 Identities=16% Similarity=0.281 Sum_probs=87.6
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCC---------------ChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 128 NLKPDPVLRSLLLSLP---LRKIIFTNA---------------DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~---~~~~ivT~~---------------~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
+..++||+.++|+.|+ ++++|+||. .......+++.+|+. |+.++.+.+...
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~s-------- 97 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPE-------- 97 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCc--------
Confidence 3677899999998884 779999995 234456677888874 776654421110
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
.+ ...+||+|.++..+++++++++++++||||+.+|+++
T Consensus 98 -------------------------------d~----------~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~a 136 (354)
T PRK05446 98 -------------------------------DN----------CSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQL 136 (354)
T ss_pred -------------------------------cc----------CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHH
Confidence 00 0017999999999999999999999999999999999
Q ss_pred HHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHH
Q 020219 270 GKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 270 a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l 303 (329)
|+++|+++++++.. --+|+++.+.|
T Consensus 137 Ak~aGi~~I~v~~~---------~~~~~~i~~~l 161 (354)
T PRK05446 137 AENMGIKGIRYARE---------TLNWDAIAEQL 161 (354)
T ss_pred HHHCCCeEEEEECC---------CCCHHHHHHHH
Confidence 99999999999653 24566666664
No 80
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.42 E-value=3.3e-13 Score=118.94 Aligned_cols=107 Identities=16% Similarity=0.261 Sum_probs=86.1
Q ss_pred HHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCccccccc
Q 020219 138 LLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIG 217 (329)
Q Consensus 138 lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (329)
.|+..+++++++|+.....+...++++|+..+|+ +
T Consensus 59 ~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~----g----------------------------------------- 93 (183)
T PRK09484 59 CLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ----G----------------------------------------- 93 (183)
T ss_pred HHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec----C-----------------------------------------
Confidence 3556678899999999999999999999876553 1
Q ss_pred ccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--CCCCCCEEeC-
Q 020219 218 HFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFE- 294 (329)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~--~~~~ad~i~~- 294 (329)
+++++..++++++++|+++++|+||||+.+|+++++++|+.++ ++... ....|++++.
T Consensus 94 ------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 94 ------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRI 154 (183)
T ss_pred ------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecC
Confidence 3667899999999999999999999999999999999999955 44332 3667899996
Q ss_pred -----CHhHHHHHHHHHHh
Q 020219 295 -----SIHNIKEAIPELWE 308 (329)
Q Consensus 295 -----~l~el~~~l~~~~~ 308 (329)
.+.++.+.|....+
T Consensus 155 ~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 155 AGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred CCCCCHHHHHHHHHHHhcC
Confidence 57777776654333
No 81
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.40 E-value=2.6e-12 Score=111.90 Aligned_cols=92 Identities=22% Similarity=0.296 Sum_probs=73.8
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC-hhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNAD-KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++|++.++|+.| +++++++||++ ...+...++.+|+..++ +.
T Consensus 44 ~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~------------------------- 89 (170)
T TIGR01668 44 AYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA------------------------- 89 (170)
T ss_pred cChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC-------------------------
Confidence 346666666665 57899999988 56666666766654211 11
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCC
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR 285 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~ 285 (329)
.||+|.++..+++++++++++|+||||+. .|+.+|+++|+.++++.++..
T Consensus 90 -----------------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 90 -----------------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred -----------------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 59999999999999999999999999998 799999999999999988753
No 82
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.40 E-value=5.5e-13 Score=120.58 Aligned_cols=72 Identities=19% Similarity=0.275 Sum_probs=60.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH--HHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e--l~~~l~~~~ 307 (329)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++.+..+ .++.|+++..+-.+ +.++|++++
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 5788999999999999999999999999999999999999988876554 46788999876544 667776653
No 83
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.40 E-value=4.3e-12 Score=112.54 Aligned_cols=220 Identities=13% Similarity=0.165 Sum_probs=143.3
Q ss_pred CccEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhh-cccHHHHHHcCCCCCHHHHHHHHhc
Q 020219 44 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY-GTTMAGLRAIGYDFDYDDYHSFVHG 122 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~ 122 (329)
+-.+++||+|-||+|.++..+-.-. +....++......+.+.+|..+ ++...++.+.| ..++++.+.+.
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~-------lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqg--v~~~~ik~~~r- 81 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDE-------LPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQG--VRIAEIKQVLR- 81 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHh-------cccchhHHHHHHhcccchHHHHHHHHHHHHHHcC--CCHHHHHHHHh-
Confidence 3368999999999986665432211 1111111111111222233332 44445555444 33666666663
Q ss_pred cCCCCCCCCChhHHHHHHhCC----CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHH
Q 020219 123 RLPYENLKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 198 (329)
Q Consensus 123 ~~~~~~~~~~pgv~~lL~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
.++..||+.++++.++ +..+|+|+.+..++..+++.+|+.+.|..|++.
T Consensus 82 -----~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTN---------------------- 134 (256)
T KOG3120|consen 82 -----SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTN---------------------- 134 (256)
T ss_pred -----cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcC----------------------
Confidence 4788899999998763 468899999999999999999999999999864
Q ss_pred hhhccccCCCCCcccccccccC-CCCCccccCCCCCCCCCCcHHHHHHHHH---HcCCCCCcEEEEeCChhchHHHHHcC
Q 020219 199 SAASTTTSANGPQIFDIIGHFA-QPNPSLVALPKTPIACKPSELAIEKALK---IASINPQRTLFFEDSVRNIQAGKRVG 274 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Kp~~~~~~~~l~---~~~v~~~e~l~VGDs~~Di~~a~~~G 274 (329)
|+..+.-+.+-++|||. |+|.+| |.++|+++ ++.++.. +-|+..++.+|+||+.||+..-...-
T Consensus 135 -----Pa~~da~G~L~v~pyH~~hsC~~C---PsNmCKg~----Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr 202 (256)
T KOG3120|consen 135 -----PACVDASGRLLVRPYHTQHSCNLC---PSNMCKGL----VLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLR 202 (256)
T ss_pred -----CcccCCCCcEEeecCCCCCccCcC---chhhhhhH----HHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcc
Confidence 44445556677899997 777777 55544444 3443333 34888899999999999999877764
Q ss_pred -ceEEEEcCCCC-----------CCCCCEEeCCHhHHHHHHHHHHhccCc
Q 020219 275 -LDTVLIGKSQR-----------VKGADYAFESIHNIKEAIPELWESDMK 312 (329)
Q Consensus 275 -~~~v~v~~~~~-----------~~~ad~i~~~l~el~~~l~~~~~~~~~ 312 (329)
...++..+++. .+..-....+-.|+...|.+++.....
T Consensus 203 ~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~~~~ 252 (256)
T KOG3120|consen 203 ACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKTIQV 252 (256)
T ss_pred cCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHHhhh
Confidence 44666666652 122334667777777777777665443
No 84
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.39 E-value=3e-12 Score=118.59 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=59.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH--HHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e--l~~~l~~~~ 307 (329)
+..|+.+++.+++++|++++++++|||+.||++|++.+|+.+++-+..+ .++.|++++.+-++ +.++|++++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 4567899999999999999999999999999999999999776654332 36789999977555 777777654
No 85
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.39 E-value=8.9e-13 Score=109.61 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=71.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCC-ChhhHHHHHHhcC-------CccccceeeeeccCCCCCCCCCCCChhhHHHHH
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNA-DKVHAVKVLSRLG-------LEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 198 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~-~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
.++||+.++|+.| +++++++|++ ........++.++ +..+|+.+++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~--------------------- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY--------------------- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC---------------------
Confidence 4668899998887 4778999999 7888888888888 777888877663
Q ss_pred hhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEeCChhchHHHHH
Q 020219 199 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~--v~~~e~l~VGDs~~Di~~a~~ 272 (329)
.+|+|..+.++++++| +.|++|+||||+..|++..++
T Consensus 88 -------------------------------------~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 88 -------------------------------------WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------------------------------------CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 3788899999999999 999999999999999877654
No 86
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.37 E-value=6.3e-12 Score=115.05 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=81.1
Q ss_pred HHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCC----hhhHHHHHHhcCC--ccccceeeeeccCCCCC
Q 020219 113 YDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNAD----KVHAVKVLSRLGL--EDCFEGIICFETLNPTH 183 (329)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~----~~~~~~~l~~~gl--~~~f~~i~~~~~~~~~~ 183 (329)
.+++++.+... ......++||++++|+.+ +.+++++|+.. ......+++.+|+ .++|+.++++++.
T Consensus 98 ~~~fw~~y~~~-~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---- 172 (237)
T PRK11009 98 NQKFWEKMNNG-WDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---- 172 (237)
T ss_pred hHHHHHHHHhc-ccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC----
Confidence 34555555543 234578899999999988 47899999953 4456666667999 7888888776531
Q ss_pred CCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 020219 184 KNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS 263 (329)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs 263 (329)
.||++. ..++++++ ++||||+
T Consensus 173 ----------------------------------------------------~K~~K~---~~l~~~~i----~I~IGDs 193 (237)
T PRK11009 173 ----------------------------------------------------GQYTKT---QWLKKKNI----RIFYGDS 193 (237)
T ss_pred ----------------------------------------------------CCCCHH---HHHHhcCC----eEEEcCC
Confidence 255544 25566776 8999999
Q ss_pred hhchHHHHHcCceEEEEcCCCC
Q 020219 264 VRNIQAGKRVGLDTVLIGKSQR 285 (329)
Q Consensus 264 ~~Di~~a~~~G~~~v~v~~~~~ 285 (329)
.+|+.+|+++|+.++.+.++..
T Consensus 194 ~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 194 DNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred HHHHHHHHHcCCcEEEEecCCC
Confidence 9999999999999999988753
No 87
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.36 E-value=1.5e-12 Score=115.60 Aligned_cols=88 Identities=20% Similarity=0.292 Sum_probs=73.8
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
...++|++.++|++| +++++++|+.+...+....+.+|+. +.++.+...
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~------------------------- 176 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI------------------------- 176 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE-------------------------
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc-------------------------
Confidence 346689999999887 4778999999999999999999983 333333200
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 274 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G 274 (329)
+||++.++..+++.+++++++|+||||+.||+.|++++|
T Consensus 177 -------------------------------~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 -------------------------------GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------------------TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------------------ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 299999999999999999999999999999999999987
No 88
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.33 E-value=1.4e-11 Score=116.08 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=89.7
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcc-ccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
..++|++.++|+.| +++++++|+.+.......++.+|+.. +|+.+++.+....|
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~---------------------- 243 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHF---------------------- 243 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhh----------------------
Confidence 56689999999887 47799999999999999999999986 89998877621100
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCC-CCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v-~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
+++ . ..+||+|.+++.++++++. ++++|++|||+.+|+++|+++|+.++++.+|
T Consensus 244 ----------~~~------------~---~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 244 ----------QRE------------Q---GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred ----------ccc------------C---CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 000 0 0169999999999999988 6799999999999999999999999999876
Q ss_pred C
Q 020219 284 Q 284 (329)
Q Consensus 284 ~ 284 (329)
.
T Consensus 299 ~ 299 (300)
T PHA02530 299 D 299 (300)
T ss_pred C
Confidence 3
No 89
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.32 E-value=1.4e-10 Score=111.04 Aligned_cols=68 Identities=13% Similarity=0.167 Sum_probs=58.1
Q ss_pred CCCcHHHHHHHHHHc--------CC-----CCCcEEEEeCCh-hchHHHHHcCceEEEEcCCC-------CCCCCCEEeC
Q 020219 236 CKPSELAIEKALKIA--------SI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ-------RVKGADYAFE 294 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~--------~v-----~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~-------~~~~ad~i~~ 294 (329)
|||++.+|+.+++.+ +. ++++++||||++ +||.+|+++|+.+++|.+|. ....|+++++
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~ 311 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN 311 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence 999999999988877 43 457999999999 89999999999999998762 1345899999
Q ss_pred CHhHHHHHH
Q 020219 295 SIHNIKEAI 303 (329)
Q Consensus 295 ~l~el~~~l 303 (329)
++.|+...|
T Consensus 312 ~l~e~~~~i 320 (321)
T TIGR01456 312 DVFDAVTKI 320 (321)
T ss_pred CHHHHHHHh
Confidence 999887764
No 90
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.31 E-value=7.7e-12 Score=94.19 Aligned_cols=64 Identities=31% Similarity=0.495 Sum_probs=59.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCC-hhchHHHHHcCceEEEEcCCCC--------CCCCCEEeCCHhHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI 299 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs-~~Di~~a~~~G~~~v~v~~~~~--------~~~ad~i~~~l~el 299 (329)
+||+|.+++.+++++++++++|++|||+ .+||.+|+++|+.++++.++.. ...||++++++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 8999999999999999999999999999 7999999999999999988752 36999999999875
No 91
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.29 E-value=6.4e-12 Score=116.51 Aligned_cols=72 Identities=13% Similarity=0.099 Sum_probs=62.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH--HHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e--l~~~l~~~~ 307 (329)
+-.|..+++.+++++|++++++++|||+.||++|.+.+|..+++-+..+ .++.|++++.+-++ +.++|++++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 6788899999999999999999999999999999999999988876554 47789999877544 777777654
No 92
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.29 E-value=3.8e-12 Score=114.61 Aligned_cols=63 Identities=24% Similarity=0.208 Sum_probs=54.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN 298 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e 298 (329)
+.+|..+++++++++|++++++++|||+.||++|++.+|+.+++-+..+ .+..|+++..+-.+
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 5788899999999999999999999999999999999999988876544 47788998866444
No 93
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.26 E-value=7.5e-11 Score=109.17 Aligned_cols=73 Identities=22% Similarity=0.272 Sum_probs=61.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH--HHHHHHHHHh
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE 308 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e--l~~~l~~~~~ 308 (329)
+..|..+++.+++++|++++++++|||+.||++|.+.+|..+++-+..+ .+..|+++..+-.+ +.+.|++++.
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 6788999999999999999999999999999999999999999887754 46677766565444 7777777654
No 94
>PRK11590 hypothetical protein; Provisional
Probab=99.26 E-value=8.5e-11 Score=105.70 Aligned_cols=106 Identities=9% Similarity=-0.070 Sum_probs=71.5
Q ss_pred CCCChhHHHHH-HhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 129 LKPDPVLRSLL-LSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 129 ~~~~pgv~~lL-~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
..++||+.++| +.+ +.+++++|++....+..++..+|+.. .+.+++++-...|+|
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg-------------------- 152 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGG-------------------- 152 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEcc--------------------
Confidence 56699999999 444 57899999999999999999998632 455666542111111
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
......|+|.-|...++..+ +.+.+.+++.|||.+|+.|...+|.+.+..+
T Consensus 153 -----------------------~~~g~~c~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 153 -----------------------WVLTLRCLGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred -----------------------EECCccCCChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 00111223444444444333 5677889999999999999999997665533
No 95
>PRK10976 putative hydrolase; Provisional
Probab=99.24 E-value=3.2e-11 Score=111.68 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=60.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCC-CCCCC--EEeCCHhH--HHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-VKGAD--YAFESIHN--IKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~ad--~i~~~l~e--l~~~l~~~~ 307 (329)
+-.|..+++.+++++|++++++++|||+.||++|.+.+|...++.+..+. ++.|+ +++.+-++ +..+|++++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 56788999999999999999999999999999999999999888876654 55665 67766444 777777765
No 96
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.21 E-value=8.8e-11 Score=100.24 Aligned_cols=81 Identities=22% Similarity=0.410 Sum_probs=70.9
Q ss_pred HHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccc
Q 020219 139 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGH 218 (329)
Q Consensus 139 L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (329)
++..+.+++++||+....+..+..++|++ .+...
T Consensus 58 ~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A------------------------------------------ 91 (175)
T COG2179 58 LKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA------------------------------------------ 91 (175)
T ss_pred HHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc------------------------------------------
Confidence 44556889999999999999999988854 44432
Q ss_pred cCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcC
Q 020219 219 FAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~ 282 (329)
.||.+..|.++++++++++++|+||||.. +|+-+++++|+.+|+|..
T Consensus 92 -----------------~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 92 -----------------KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred -----------------cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 69999999999999999999999999999 899999999999999853
No 97
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.21 E-value=2.4e-10 Score=106.64 Aligned_cols=71 Identities=15% Similarity=0.077 Sum_probs=57.3
Q ss_pred CcHHHHHHHHHHcCCCC-CcEEEEeCChhchHHHHHcCceEEEEcCCCCCC-----CC-CEEe--CC--HhHHHHHHHHH
Q 020219 238 PSELAIEKALKIASINP-QRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVK-----GA-DYAF--ES--IHNIKEAIPEL 306 (329)
Q Consensus 238 p~~~~~~~~l~~~~v~~-~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~-----~a-d~i~--~~--l~el~~~l~~~ 306 (329)
.|..+++++++.+|+++ +++++|||+.||++|++.+|+.+++.+..+..+ .+ +.+. .+ -+.+.+.|+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 67789999999999999 999999999999999999999999988665433 33 4666 33 33577777776
Q ss_pred Hh
Q 020219 307 WE 308 (329)
Q Consensus 307 ~~ 308 (329)
+.
T Consensus 270 ~~ 271 (273)
T PRK00192 270 LS 271 (273)
T ss_pred Hh
Confidence 54
No 98
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.20 E-value=3.4e-11 Score=112.07 Aligned_cols=73 Identities=8% Similarity=0.032 Sum_probs=60.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCE--EeCCHhH--HHHHHHHHHh
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADY--AFESIHN--IKEAIPELWE 308 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~--i~~~l~e--l~~~l~~~~~ 308 (329)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+..+ .++.|++ ++.+-++ +..+|++++.
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 5678899999999999999999999999999999999999888887655 3566664 6655443 7888888774
No 99
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.18 E-value=2.5e-10 Score=105.95 Aligned_cols=68 Identities=28% Similarity=0.403 Sum_probs=59.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCC------------CCCCCCEEeCCHhHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ------------RVKGADYAFESIHNIKEA 302 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~------------~~~~ad~i~~~l~el~~~ 302 (329)
|||++.+++.++++++++|++|+||||+. +||.-+++.|++++++.+|- ....|||.++++.++.+.
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~ 302 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPL 302 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhh
Confidence 99999999999999999999999999999 69999999999999997663 244688888888877665
Q ss_pred H
Q 020219 303 I 303 (329)
Q Consensus 303 l 303 (329)
+
T Consensus 303 ~ 303 (306)
T KOG2882|consen 303 L 303 (306)
T ss_pred c
Confidence 3
No 100
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.18 E-value=4e-10 Score=103.17 Aligned_cols=48 Identities=29% Similarity=0.487 Sum_probs=45.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcE-EEEeCCh-hchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRT-LFFEDSV-RNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~-l~VGDs~-~Di~~a~~~G~~~v~v~~~ 283 (329)
+||++.+++.++++++++++++ +||||+. +||.+|+++|++++++.+|
T Consensus 187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 7999999999999999999887 9999999 8999999999999998764
No 101
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.13 E-value=4.3e-11 Score=107.53 Aligned_cols=60 Identities=20% Similarity=0.261 Sum_probs=52.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFES 295 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~ 295 (329)
+..|..+++.+++++|++++++++|||+.||++|++.+|+.+++.+..+ .+..|++++.+
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCC
Confidence 4677789999999999999999999999999999999999988876544 46678888765
No 102
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.13 E-value=5.5e-10 Score=97.47 Aligned_cols=102 Identities=15% Similarity=0.177 Sum_probs=79.1
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCcc--ccceeeeeccCCCCCCCCCCCChhhHHHHHhhh
Q 020219 127 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED--CFEGIICFETLNPTHKNTVSDDEDDIAFVESAA 201 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (329)
+++.+.||+++|.+.|+ .+++++|++....+..+...+|++. .|...+-.+..+.|.|
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g----------------- 147 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG----------------- 147 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-----------------
Confidence 57888999999998884 6689999999999999999999975 6777777777777654
Q ss_pred ccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHH
Q 020219 202 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~ 272 (329)
|++-.|+.. +--|+.++..+.+ +.+...++||||+.+|+++..-
T Consensus 148 -----------------fd~~~ptsd--------sggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 148 -----------------FDTNEPTSD--------SGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred -----------------cccCCcccc--------CCccHHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 334444432 2233467776666 7788999999999999998666
No 103
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.12 E-value=5.5e-11 Score=101.19 Aligned_cols=93 Identities=15% Similarity=0.090 Sum_probs=81.3
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccc-cceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDC-FEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~-f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
...++||+.++|++|+ ++++|+|++....+..+++++++..+ |+.+++.++...
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~----------------------- 99 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF----------------------- 99 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc-----------------------
Confidence 3567899999999985 77899999999999999999998654 589998876553
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceE
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT 277 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~ 277 (329)
.||+ +.+++++++++|++|++|||+.+|+++++++|+.+
T Consensus 100 -------------------------------~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 100 -------------------------------VKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -------------------------------cCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 5775 89999999999999999999999999999998765
No 104
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.11 E-value=2e-09 Score=94.21 Aligned_cols=67 Identities=24% Similarity=0.347 Sum_probs=57.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCC-----CCCCCEEeCCHhHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKEA 302 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~ad~i~~~l~el~~~ 302 (329)
+||++.+++.+++++++++++.++|||+.+|+++|.++|+..+.+.++.. ...++.+++++.++..+
T Consensus 104 RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (181)
T COG0241 104 RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFANL 175 (181)
T ss_pred cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHHHH
Confidence 79999999999999999999999999999999999999999877765542 33567888888887733
No 105
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.10 E-value=2.6e-10 Score=100.48 Aligned_cols=69 Identities=17% Similarity=0.372 Sum_probs=60.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChh-chHHHHHcCceEEEEcCCC--------CCCCCCEEeCCHhHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVR-NIQAGKRVGLDTVLIGKSQ--------RVKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~-Di~~a~~~G~~~v~v~~~~--------~~~~ad~i~~~l~el~~~l~ 304 (329)
|||++..|+.+++.+|++|++++||||..+ |+-.|++.||..+.|.+|. ....||..++++.+..++|-
T Consensus 180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLII 257 (262)
T ss_pred cCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHH
Confidence 999999999999999999999999999996 8999999999999997763 25577888888887776653
No 106
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.10 E-value=3.2e-10 Score=108.42 Aligned_cols=87 Identities=17% Similarity=0.139 Sum_probs=76.1
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHh----cCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSR----LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~----~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
++||+.++|+.| ++.+.++|+++...+...+++ +++..+|+.+..+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------------------- 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------------------- 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---------------------------
Confidence 367788888776 467889999999999999999 8888889888654
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCce
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD 276 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~ 276 (329)
.||+|..+.++++++++.+++++||||+..|+.++++++..
T Consensus 85 --------------------------------~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 --------------------------------WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --------------------------------cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 48999999999999999999999999999999999997653
No 107
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.07 E-value=2.4e-09 Score=99.93 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeecc----CC
Q 020219 108 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET----LN 180 (329)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~----~~ 180 (329)
+..+..+.+.+.+.. ..+.+.||+.++++.| +++++|+|++....+...++++|+...+..+++..- .+
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG 178 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG 178 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC
Confidence 345567777766653 4588899999999887 478999999999999999999998766766654431 11
Q ss_pred CCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEE
Q 020219 181 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTL 258 (329)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~--v~~~e~l 258 (329)
.+.| ..+|-+- ..+| +..+++...+.++ ..+++|+
T Consensus 179 vltG----------------------~~~P~i~--------------------~~~K-~~~v~~~~~~~~~~~~~~~~vI 215 (277)
T TIGR01544 179 VLKG----------------------FKGPLIH--------------------TFNK-NHDVALRNTEYFNQLKDRSNII 215 (277)
T ss_pred eEeC----------------------CCCCccc--------------------cccc-HHHHHHHHHHHhCccCCcceEE
Confidence 1100 0000000 0022 1256667888888 8999999
Q ss_pred EEeCChhchHHHHHc
Q 020219 259 FFEDSVRNIQAGKRV 273 (329)
Q Consensus 259 ~VGDs~~Di~~a~~~ 273 (329)
+|||+.+|+.||..+
T Consensus 216 ~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 216 LLGDSQGDLRMADGV 230 (277)
T ss_pred EECcChhhhhHhcCC
Confidence 999999999998877
No 108
>PLN02887 hydrolase family protein
Probab=99.07 E-value=1.2e-09 Score=111.65 Aligned_cols=72 Identities=15% Similarity=0.118 Sum_probs=61.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH--HHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e--l~~~l~~~~ 307 (329)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..++|-+..+ .++.|++|+.+-++ +.++|++++
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 5788899999999999999999999999999999999999988887665 47789999876544 677776653
No 109
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.04 E-value=1.2e-09 Score=110.30 Aligned_cols=89 Identities=22% Similarity=0.266 Sum_probs=72.1
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCCh------------hhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHH
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNADK------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA 195 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~~------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (329)
++||+.+.|+.| +++++|+||... ..+..+++.+|+. |+.+++.+...
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~--------------- 260 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGF--------------- 260 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCC---------------
Confidence 458888888877 688999999765 3467788888985 88777654322
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC----CCCCcEEEEeCChhchHHHH
Q 020219 196 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS----INPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~----v~~~e~l~VGDs~~Di~~a~ 271 (329)
.+||+|.++.+++++++ +++++++||||+..|+++++
T Consensus 261 ---------------------------------------~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~ 301 (526)
T TIGR01663 261 ---------------------------------------YRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGK 301 (526)
T ss_pred ---------------------------------------CCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHH
Confidence 17999999999999985 89999999999999998888
Q ss_pred HcCc
Q 020219 272 RVGL 275 (329)
Q Consensus 272 ~~G~ 275 (329)
++|-
T Consensus 302 ~ag~ 305 (526)
T TIGR01663 302 AAGK 305 (526)
T ss_pred hcCC
Confidence 7774
No 110
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.02 E-value=8.9e-10 Score=99.24 Aligned_cols=44 Identities=11% Similarity=-0.001 Sum_probs=39.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEE
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
+-.|+.+++++++++|++++++++|||+.||++|++.+|..++.
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 34567889999999999999999999999999999999987664
No 111
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.01 E-value=6.8e-09 Score=99.71 Aligned_cols=121 Identities=19% Similarity=0.175 Sum_probs=85.7
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhc-C-------CccccceeeeeccCCCCCCCCCCCChhhHHH
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL-G-------LEDCFEGIICFETLNPTHKNTVSDDEDDIAF 196 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~-g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (329)
.+...||+.++|+.| +.+++++||++...+...++.+ | +.++||.++++...+.+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~F-------------- 247 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGF-------------- 247 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcc--------------
Confidence 455689999999887 4789999999999999999996 7 88999999998765542
Q ss_pred HHhhhccccCCCCCcccc-cccccCCCCCccccC--------CCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hc
Q 020219 197 VESAASTTTSANGPQIFD-IIGHFAQPNPSLVAL--------PKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RN 266 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~D 266 (329)
|. -+||+..+. ..... .++....- --...+.+.+++.+++++||||+. .|
T Consensus 248 ----------------F~~~~pf~~v~~-~~g~~~~~~~~~l~~g~vY~g---Gn~~~~~~~l~~~~~~vlYvGD~i~~D 307 (343)
T TIGR02244 248 ----------------FTEGRPFRQVDV-ETGSLKWGEVDGLEPGKVYSG---GSLKQFHELLKWRGKEVLYFGDHIYGD 307 (343)
T ss_pred ----------------cCCCCceEEEeC-CCCcccCCccccccCCCeEeC---CCHHHHHHHHCCCCCcEEEECCcchHH
Confidence 11 111111111 11010 00000011 236677888899999999999999 79
Q ss_pred hHHHH-HcCceEEEEcC
Q 020219 267 IQAGK-RVGLDTVLIGK 282 (329)
Q Consensus 267 i~~a~-~~G~~~v~v~~ 282 (329)
+..++ .+||.++++-.
T Consensus 308 i~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 308 LLRSKKKRGWRTAAIIP 324 (343)
T ss_pred HHhhHHhcCcEEEEEch
Confidence 99998 89999998643
No 112
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.01 E-value=1.5e-09 Score=101.20 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=60.0
Q ss_pred CCCcHHHHHHHHHHcCC---CCCcEEEEeCChhchHHHHHcCceEEEEcCC-C------CCCCCCEEeCCHh--HHHHHH
Q 020219 236 CKPSELAIEKALKIASI---NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-Q------RVKGADYAFESIH--NIKEAI 303 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v---~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~-~------~~~~ad~i~~~l~--el~~~l 303 (329)
+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|..++|.+.. + .+..++++..... .+.+.|
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 57888999999999999 9999999999999999999999998887433 1 2446888888766 577777
Q ss_pred HHHHh
Q 020219 304 PELWE 308 (329)
Q Consensus 304 ~~~~~ 308 (329)
+.++.
T Consensus 265 ~~~~~ 269 (271)
T PRK03669 265 DHFFS 269 (271)
T ss_pred HHHHh
Confidence 76653
No 113
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.01 E-value=1.6e-10 Score=97.55 Aligned_cols=97 Identities=23% Similarity=0.344 Sum_probs=78.5
Q ss_pred HHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCccccc
Q 020219 136 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 215 (329)
Q Consensus 136 ~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (329)
.++|..+++++.|+|+.+...++...+.+|+...|-+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG------------------------------------------- 80 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG------------------------------------------- 80 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec-------------------------------------------
Confidence 4567789999999999999999999999998643322
Q ss_pred ccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC-CCCCCCCEEeC
Q 020219 216 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFE 294 (329)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~-~~~~~ad~i~~ 294 (329)
.+.|..+++.+++++++.+++|.||||..+|+.+.+++|++++..+.. +....++++..
T Consensus 81 --------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 81 --------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTS 140 (170)
T ss_pred --------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhh
Confidence 245568999999999999999999999999999999999987665332 34556666654
Q ss_pred C
Q 020219 295 S 295 (329)
Q Consensus 295 ~ 295 (329)
.
T Consensus 141 ~ 141 (170)
T COG1778 141 K 141 (170)
T ss_pred c
Confidence 3
No 114
>PRK08238 hypothetical protein; Validated
Probab=98.98 E-value=8.3e-09 Score=103.65 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=72.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
..+.+||+.++++++ +.+++++|+++...++..++++|+ |+.++++++...
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~----------------------- 123 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN----------------------- 123 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc-----------------------
Confidence 455679999999887 467899999999999999999987 899998875432
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~ 284 (329)
+||++.. +.+.+.++ .++++++||+.+|+++++.+| ..+.|+.+.
T Consensus 124 -------------------------------~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 124 -------------------------------LKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred -------------------------------cCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 3443322 23445554 356899999999999999999 555666553
No 115
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.93 E-value=2.3e-09 Score=98.73 Aligned_cols=62 Identities=16% Similarity=0.185 Sum_probs=52.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHh
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIH 297 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~ 297 (329)
+-.|..+++.+++.++++++++++|||+.||++|++.+|+.+++.+... .+..|++++.+-+
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNN 248 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCC
Confidence 5678899999999999999999999999999999999999888865433 3667888877643
No 116
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.87 E-value=6.6e-08 Score=87.13 Aligned_cols=106 Identities=8% Similarity=-0.082 Sum_probs=69.3
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 129 LKPDPVLRSLLL-SL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 129 ~~~~pgv~~lL~-~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
..++||+.++|+ .+ +.+++|+|++....++.+.+..++.. .+.+++++-.....|
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~~gg-------------------- 151 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERGNGG-------------------- 151 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEeCCc--------------------
Confidence 467999999995 43 67899999999999999998866533 244555431000000
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
......|.|.-|...++..+ +.+.+.+++.|||.+|++|...+|.+.+.-+
T Consensus 152 -----------------------~~~g~~c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 152 -----------------------WVLPLRCLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred -----------------------eEcCccCCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 00111233444444444444 4566788999999999999999997665533
No 117
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.85 E-value=1.9e-09 Score=93.73 Aligned_cols=98 Identities=19% Similarity=0.321 Sum_probs=68.6
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeC-CChhhHHHHHHhcCCc----------cccceeeeeccCCCCCCCCCCCChh
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTN-ADKVHAVKVLSRLGLE----------DCFEGIICFETLNPTHKNTVSDDED 192 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~-~~~~~~~~~l~~~gl~----------~~f~~i~~~~~~~~~~~~~~~~~~~ 192 (329)
+.+.++|++.++|++| +.+++++|- ...+.++..|+.+++. .+|+..-.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI----------------- 104 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI----------------- 104 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE-----------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe-----------------
Confidence 5688899999999887 577889984 4567899999999998 55554222
Q ss_pred hHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHH
Q 020219 193 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~ 272 (329)
. ..+|...|+.+.++.|+++++++||+|-..+++..++
T Consensus 105 -----------------------~-------------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 105 -----------------------Y-------------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK 142 (169)
T ss_dssp -----------------------S-------------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT
T ss_pred -----------------------e-------------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEe
Confidence 1 1366789999999999999999999999999999999
Q ss_pred cCceEEEEcCC
Q 020219 273 VGLDTVLIGKS 283 (329)
Q Consensus 273 ~G~~~v~v~~~ 283 (329)
.|..++++++|
T Consensus 143 lGV~~v~v~~G 153 (169)
T PF12689_consen 143 LGVTCVLVPDG 153 (169)
T ss_dssp TT-EEEE-SSS
T ss_pred cCcEEEEeCCC
Confidence 99999999887
No 118
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.85 E-value=6.7e-08 Score=83.71 Aligned_cols=195 Identities=18% Similarity=0.250 Sum_probs=118.4
Q ss_pred CccEEEEeCCCCcccCc---ccHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcccHH--HHHH-----cCCCCCH
Q 020219 44 KYDCLLFDLDDTLYPYS---SGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA--GLRA-----IGYDFDY 113 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~---~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~g~~~~--~l~~-----~~~~~~~ 113 (329)
+.|+++.|+.||+-.-+ ...++.....+.+++.+..+- +.+..+........|.... .+.+ ...+...
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~--~~v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K~ 80 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTED--SEVKKIVDEVLSEFGIANSEEALVALLLEWIAEDSKD 80 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccC--ChhhHHHHHHHHHhCccchHHHHHHHHHHHHhccccc
Confidence 34899999999998733 345555566667755444332 2233333444444444331 1111 0111111
Q ss_pred HHHHHHHhccCC---C----CCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhc---CCccccceeeeeccCC
Q 020219 114 DDYHSFVHGRLP---Y----ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLN 180 (329)
Q Consensus 114 ~~~~~~~~~~~~---~----~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~ 180 (329)
. -.+.+++.+. | -+..+||++.+.|++. +.+++|.|+++-.......... .+..+|++.+-. ..+
T Consensus 81 t-~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG 158 (229)
T COG4229 81 T-PLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG 158 (229)
T ss_pred c-hHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc
Confidence 1 1111222111 1 2467799999999764 6899999998766544433221 233444444322 111
Q ss_pred CCCCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 020219 181 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFF 260 (329)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~V 260 (329)
.|-....|.++++..|++|.+++|.
T Consensus 159 -------------------------------------------------------~KrE~~SY~kIa~~iGl~p~eilFL 183 (229)
T COG4229 159 -------------------------------------------------------KKRESQSYAKIAGDIGLPPAEILFL 183 (229)
T ss_pred -------------------------------------------------------ccccchhHHHHHHhcCCCchheEEe
Confidence 4677789999999999999999999
Q ss_pred eCChhchHHHHHcCceEEEEcCCCCCCCCC----EEeCCHh
Q 020219 261 EDSVRNIQAGKRVGLDTVLIGKSQRVKGAD----YAFESIH 297 (329)
Q Consensus 261 GDs~~Di~~a~~~G~~~v~v~~~~~~~~ad----~i~~~l~ 297 (329)
.|+++.+.+|+.+|+.++++.+......+| .++.|+.
T Consensus 184 SDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 184 SDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred cCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 999999999999999999987665444333 4666655
No 119
>PTZ00445 p36-lilke protein; Provisional
Probab=98.85 E-value=1.8e-08 Score=89.86 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=45.2
Q ss_pred CCCcHHH--H--HHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELA--I--EKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~--~--~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
.||+|.+ | +++++++|++|++|+||+|+..++++|++.|+.++.+...
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 6899999 8 9999999999999999999999999999999999998654
No 120
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.80 E-value=2.7e-09 Score=96.16 Aligned_cols=63 Identities=24% Similarity=0.266 Sum_probs=55.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCCEEeCCHhH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN 298 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad~i~~~l~e 298 (329)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|...++-+..+ -+..|++++.+-++
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 5688899999999999999999999999999999999999887765544 47888898888776
No 121
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.76 E-value=2.7e-08 Score=102.34 Aligned_cols=48 Identities=15% Similarity=0.039 Sum_probs=42.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEE--eCChhchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFF--EDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~V--GDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
+-.|..+++.+++.++++.++++.| ||+.||++|.+.+|..+++-+..
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~ 660 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPG 660 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCC
Confidence 4677899999999999999999999 99999999999999988885433
No 122
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.74 E-value=9.8e-08 Score=87.54 Aligned_cols=85 Identities=16% Similarity=0.029 Sum_probs=66.3
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChhhHH--HHHHhcCCcc-ccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 132 DPVLRSLLLSL---PLRKIIFTNADKVHAV--KVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 132 ~pgv~~lL~~L---~~~~~ivT~~~~~~~~--~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
+||+.++|++| +++++++||+...... ..++++|+.. +|+.++++....
T Consensus 26 ~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~------------------------- 80 (242)
T TIGR01459 26 YPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA------------------------- 80 (242)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-------------------------
Confidence 46666666665 5789999998877655 7889999987 899999875322
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCc
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 275 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~ 275 (329)
...+..++++++++++++++|||+..|++.....|.
T Consensus 81 ----------------------------------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 81 ----------------------------------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ----------------------------------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 146777778889999999999999999988866654
No 123
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.74 E-value=5.7e-08 Score=88.54 Aligned_cols=70 Identities=16% Similarity=0.039 Sum_probs=54.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-CCCCCC----EEeCCH--hHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGAD----YAFESI--HNIKEAIPE 305 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~ad----~i~~~l--~el~~~l~~ 305 (329)
+++|+.+++.+++++|++++++++|||+.||++|++.+|..+++-+... .+..++ ++..+- ..+.+.|.+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 6889999999999999999999999999999999999998887765443 345566 666542 225555543
No 124
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.74 E-value=6.3e-08 Score=84.52 Aligned_cols=95 Identities=19% Similarity=0.265 Sum_probs=60.2
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCC
Q 020219 133 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 209 (329)
Q Consensus 133 pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (329)
|++.++|+.+ +.+++|+|++....+..+++.+|+.. +.+++.+. ....+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~-~~~~~~~----------------------- 145 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNEL-FDNGGGI----------------------- 145 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEE-ECTTCCE-----------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEee-eecccce-----------------------
Confidence 5666998665 68899999999999999999999863 22333332 0000000
Q ss_pred CcccccccccCCCCCccccCCCCCCCCCCcHHHHHHH---HHHcCCCCCcEEEEeCChhchHHHH
Q 020219 210 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKA---LKIASINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~---l~~~~v~~~e~l~VGDs~~Di~~a~ 271 (329)
....+.+ .. .+ -|...++.+ ... +.++.++++||||.+|+.|++
T Consensus 146 -~~~~~~~-------------~~--~~-~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 146 -FTGRITG-------------SN--CG-GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -EEEEEEE-------------EE--ES-HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred -eeeeECC-------------CC--CC-cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 0000000 00 01 155677777 444 888999999999999999986
No 125
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.74 E-value=9.3e-09 Score=94.31 Aligned_cols=47 Identities=36% Similarity=0.427 Sum_probs=43.1
Q ss_pred CCCcHHHHHHHHHHcCCC-CCcEEEEeCC-hhchHHHHHcCceEEEEcC
Q 020219 236 CKPSELAIEKALKIASIN-PQRTLFFEDS-VRNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~-~~e~l~VGDs-~~Di~~a~~~G~~~v~v~~ 282 (329)
+||+|.+++.++++++.. +++|+||||+ .+|+.+|+++|+.++++.+
T Consensus 194 gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 194 GKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 899999999999999975 6799999999 4999999999999999753
No 126
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.71 E-value=2.6e-07 Score=84.98 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=41.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
+.+|..+++.+++.+++++++|++|||+.||++|++.+|..++.+...
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 689999999999999999999999999999999999965455555433
No 127
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.70 E-value=2.1e-07 Score=85.87 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=56.3
Q ss_pred CCCcHHHHHHHHHHcCCC--CCcEEEEeCChhchHHHHHcCceEEEEcCC----CCCCC--C-CEEeCCHh--HHHHHHH
Q 020219 236 CKPSELAIEKALKIASIN--PQRTLFFEDSVRNIQAGKRVGLDTVLIGKS----QRVKG--A-DYAFESIH--NIKEAIP 304 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~--~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~----~~~~~--a-d~i~~~l~--el~~~l~ 304 (329)
+-.|..+++++++.++++ .+++++|||+.||++|++.+|..+++-+.. +.++. | +++..+-. .+.+.|+
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 467789999999999999 999999999999999999999999998765 23444 3 47775532 2566665
Q ss_pred HH
Q 020219 305 EL 306 (329)
Q Consensus 305 ~~ 306 (329)
++
T Consensus 254 ~~ 255 (256)
T TIGR01486 254 HL 255 (256)
T ss_pred Hh
Confidence 54
No 128
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.67 E-value=2.3e-07 Score=86.41 Aligned_cols=95 Identities=20% Similarity=0.255 Sum_probs=67.3
Q ss_pred CCHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChh---hHHHHHHhcCCccc-cceeeeeccCCCCC
Q 020219 111 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLEDC-FEGIICFETLNPTH 183 (329)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~---~~~~~l~~~gl~~~-f~~i~~~~~~~~~~ 183 (329)
++.+.+.+.+.. ....++||+.++|+.+ +.+++++|+.... .....++++|+... ++.++.-++
T Consensus 103 ~~~~~w~~wv~~----~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~----- 173 (266)
T TIGR01533 103 FDPETWDKWVQA----AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD----- 173 (266)
T ss_pred CCHHHHHHHHHc----CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-----
Confidence 334455555544 4567889999999866 5789999997643 34578888998754 345554321
Q ss_pred CCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 020219 184 KNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDS 263 (329)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs 263 (329)
.++|+..++.+.+.+++ +++|||+
T Consensus 174 ----------------------------------------------------~~~K~~rr~~I~~~y~I----vl~vGD~ 197 (266)
T TIGR01533 174 ----------------------------------------------------KSSKESRRQKVQKDYEI----VLLFGDN 197 (266)
T ss_pred ----------------------------------------------------CCCcHHHHHHHHhcCCE----EEEECCC
Confidence 35566788888887777 8999999
Q ss_pred hhchHHH
Q 020219 264 VRNIQAG 270 (329)
Q Consensus 264 ~~Di~~a 270 (329)
.+|+..+
T Consensus 198 ~~Df~~~ 204 (266)
T TIGR01533 198 LLDFDDF 204 (266)
T ss_pred HHHhhhh
Confidence 9999653
No 129
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.66 E-value=5.4e-07 Score=78.31 Aligned_cols=153 Identities=14% Similarity=0.148 Sum_probs=96.0
Q ss_pred HHHHHHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCC
Q 020219 113 YDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 189 (329)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 189 (329)
.++..+.+. .++.+.||.++++++++ .+.+++|++...++..++++++=....+.+-...+.-
T Consensus 61 ~~Eile~ll-----k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~--------- 126 (220)
T COG4359 61 LEEILEFLL-----KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND--------- 126 (220)
T ss_pred HHHHHHHHH-----hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---------
Confidence 355555554 45788999999998874 8899999999999999999875333333332211100
Q ss_pred ChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH
Q 020219 190 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 269 (329)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~ 269 (329)
++++.+-+. ..-++..-.|--++..+ +.+.-+++-++|+|||..|+++
T Consensus 127 ----------------------~ih~dg~h~------i~~~~ds~fG~dK~~vI----~~l~e~~e~~fy~GDsvsDlsa 174 (220)
T COG4359 127 ----------------------YIHIDGQHS------IKYTDDSQFGHDKSSVI----HELSEPNESIFYCGDSVSDLSA 174 (220)
T ss_pred ----------------------eEcCCCcee------eecCCccccCCCcchhH----HHhhcCCceEEEecCCcccccH
Confidence 111111110 01111111233334444 4444467779999999999999
Q ss_pred HHHcCceEEE---EcCCCCCCCCCEEeCCHhHHHHHHHHHHhccC
Q 020219 270 GKRVGLDTVL---IGKSQRVKGADYAFESIHNIKEAIPELWESDM 311 (329)
Q Consensus 270 a~~~G~~~v~---v~~~~~~~~ad~i~~~l~el~~~l~~~~~~~~ 311 (329)
|+....-.+- ++.=.++....+-++++.|+...++++++..+
T Consensus 175 aklsDllFAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl~~~~ 219 (220)
T COG4359 175 AKLSDLLFAKDDLLNYCREQNLNFLEFETFYEILKEIEKVLEVQE 219 (220)
T ss_pred hhhhhhHhhHHHHHHHHHHcCCCCcccccHHHHHHHHHHHHhhhc
Confidence 9988643322 11222566777889999999999999887665
No 130
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.48 E-value=3.9e-07 Score=93.11 Aligned_cols=112 Identities=13% Similarity=0.229 Sum_probs=85.3
Q ss_pred CCCCChhHHHHHHhC---CC-cEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 128 NLKPDPVLRSLLLSL---PL-RKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~-~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
+..++||+.+++++| ++ +++++|+.+...+...++++|++.+|..+.
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~----------------------------- 410 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL----------------------------- 410 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-----------------------------
Confidence 456789999999888 47 889999999999999999999976654332
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
..+| ..++++++..+++++||||+.||+++++++|+...+-..+
T Consensus 411 --------------------------------p~~K----~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~ 454 (536)
T TIGR01512 411 --------------------------------PEDK----LEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASG 454 (536)
T ss_pred --------------------------------cHHH----HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCc
Confidence 1223 3355555556689999999999999999999755543122
Q ss_pred --CCCCCCCEEe--CCHhHHHHHHH
Q 020219 284 --QRVKGADYAF--ESIHNIKEAIP 304 (329)
Q Consensus 284 --~~~~~ad~i~--~~l~el~~~l~ 304 (329)
.....+|+++ +++.++.+.+.
T Consensus 455 ~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 455 SDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred cHHHHHhCCEEEECCCHHHHHHHHH
Confidence 2366899999 89999877653
No 131
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.44 E-value=5.5e-07 Score=92.40 Aligned_cols=111 Identities=13% Similarity=0.201 Sum_probs=83.5
Q ss_pred CCCCChhHHHHHHhC---C-CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 128 NLKPDPVLRSLLLSL---P-LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~-~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
+..++||+.++|+.| + ++++++|+.+...+...++++|++.+|..+.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~----------------------------- 432 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL----------------------------- 432 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC-----------------------------
Confidence 456799999999887 5 7889999999999999999999976665431
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
+++|+.. +++++..+.+|+||||+.||+++++++|+...+- .+
T Consensus 433 --------------------------------p~~K~~~----v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~ 475 (556)
T TIGR01525 433 --------------------------------PEDKLAI----VKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AG 475 (556)
T ss_pred --------------------------------HHHHHHH----HHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CC
Confidence 1233344 4444446679999999999999999999655544 22
Q ss_pred C--CCCCCCEEeC--CHhHHHHHHH
Q 020219 284 Q--RVKGADYAFE--SIHNIKEAIP 304 (329)
Q Consensus 284 ~--~~~~ad~i~~--~l~el~~~l~ 304 (329)
. ....||+++. ++..+.+.+.
T Consensus 476 ~~~~~~~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 476 SDVAIEAADIVLLNDDLSSLPTAID 500 (556)
T ss_pred CHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 2 3567999888 6887777653
No 132
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.40 E-value=2.5e-06 Score=74.09 Aligned_cols=45 Identities=24% Similarity=0.420 Sum_probs=38.4
Q ss_pred CCcHHHHHHHHHHcCC-----CCCcEEEEeCCh-hchHHHHHcCceEEEEcCC
Q 020219 237 KPSELAIEKALKIASI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v-----~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~ 283 (329)
|| ..+..+++.++. .|+++++|||.. +|+-+|.+.|+.++++..|
T Consensus 116 KP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 116 KP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 66 666777777754 499999999999 8999999999999998765
No 133
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.40 E-value=6.5e-07 Score=77.23 Aligned_cols=42 Identities=19% Similarity=0.154 Sum_probs=33.9
Q ss_pred CCCcHHHHHHHHHHcCC----CCCcEEEEeCC-----------hhchHHHHHcCceE
Q 020219 236 CKPSELAIEKALKIASI----NPQRTLFFEDS-----------VRNIQAGKRVGLDT 277 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v----~~~e~l~VGDs-----------~~Di~~a~~~G~~~ 277 (329)
+||.+.+++.+++.+.. +.++++||||+ ..|..-|.++|++.
T Consensus 96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 89999999999999874 89999999996 57899999999874
No 134
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.38 E-value=8.7e-07 Score=78.39 Aligned_cols=47 Identities=13% Similarity=0.215 Sum_probs=35.7
Q ss_pred EEEeCChhchHHHHHcCceEEEEcCCCCCCC-CCEEeCCHhHHHHHHH
Q 020219 258 LFFEDSVRNIQAGKRVGLDTVLIGKSQRVKG-ADYAFESIHNIKEAIP 304 (329)
Q Consensus 258 l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~-ad~i~~~l~el~~~l~ 304 (329)
++|+|++..+..+.+.|++.++...+..... .-..+.+|.|+.+.+-
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i~ 186 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLIL 186 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHHH
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHHH
Confidence 8999999999999999999999977654333 5788999999988763
No 135
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.32 E-value=2.4e-06 Score=87.87 Aligned_cols=110 Identities=14% Similarity=0.240 Sum_probs=80.8
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 128 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
...++||+.+++++| +++++++|+++...+...++++|++ ++. + ..
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~-~-~~------------------------ 451 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRA-E-VL------------------------ 451 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEc-c-CC------------------------
Confidence 346789999998877 4788999999999999999999985 221 1 00
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~ 284 (329)
.++|.+.++++ +.++++|+||||+.||+.+++++|+...+- .+.
T Consensus 452 -------------------------------p~~K~~~v~~l----~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~ 495 (562)
T TIGR01511 452 -------------------------------PDDKAALIKEL----QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGT 495 (562)
T ss_pred -------------------------------hHHHHHHHHHH----HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcC
Confidence 23444444444 346789999999999999999999865443 332
Q ss_pred --CCCCCCEEe--CCHhHHHHHHH
Q 020219 285 --RVKGADYAF--ESIHNIKEAIP 304 (329)
Q Consensus 285 --~~~~ad~i~--~~l~el~~~l~ 304 (329)
....||+++ +++.++.+.+.
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHH
Confidence 366799998 47888777653
No 136
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.27 E-value=1.2e-06 Score=79.68 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=36.7
Q ss_pred CCCcHHHHHHHHHHcCC--CCCcEEEEeCChhchHHHHHcCceEE
Q 020219 236 CKPSELAIEKALKIASI--NPQRTLFFEDSVRNIQAGKRVGLDTV 278 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v--~~~e~l~VGDs~~Di~~a~~~G~~~v 278 (329)
+-.|+.+++.+++.+++ .++++++|||+.||++|++.+|+.++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 35567888999998876 67799999999999999999998754
No 137
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.20 E-value=1e-06 Score=76.24 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=78.7
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCcc-ccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
+...||+.++|+.|. +.+++.|++...++..+++.++... .|+.+++.++...
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~------------------------ 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF------------------------ 96 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE------------------------
Confidence 556799999999984 7799999999999999999999765 7888887653221
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
.+++ +.+.++.+|.++++|++|||+..|+.++.+.|+.+....
T Consensus 97 ------------------------------~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 97 ------------------------------TNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred ------------------------------eCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 2333 667788899999999999999999999999998866554
No 138
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.18 E-value=3.2e-06 Score=79.38 Aligned_cols=43 Identities=21% Similarity=0.157 Sum_probs=35.7
Q ss_pred CCcHHHHHHHHHHcCCC--CCcEEEEeCChhchHHHHHcCceEEE
Q 020219 237 KPSELAIEKALKIASIN--PQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~--~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
.+|..+++.+.+.++-. +-.++.+|||+||+.|.+.+.++++.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 46778888888877654 44799999999999999999987666
No 139
>PLN02423 phosphomannomutase
Probab=98.17 E-value=4.3e-05 Score=70.41 Aligned_cols=54 Identities=11% Similarity=0.019 Sum_probs=45.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeC----ChhchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGD----s~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
+-.|..+++.++ +++++++||| +.||++|.+.-|+.++- +.++++..+.+.+++
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~-------------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHT-------------VTSPDDTREQCTALF 244 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEE-------------eCCHHHHHHHHHHhc
Confidence 567778888777 8999999999 79999999998877766 788888888887764
No 140
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.17 E-value=7.6e-06 Score=88.39 Aligned_cols=138 Identities=20% Similarity=0.233 Sum_probs=98.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
+++||+++.++.| +++++++|+.+...+....+++|+...++.++++.+..... . +.+..+-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~-------~---~~l~~~~----- 592 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMD-------D---QQLSQIV----- 592 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCC-------H---HHHHHHh-----
Confidence 5689999998877 58899999999999999999999987777776655433210 0 0011000
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
....+| +...|+-...+.+.++-..+.+.|+||+.||..+++++++..++-..+.
T Consensus 593 -~~~~Vf----------------------ar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v 649 (884)
T TIGR01522 593 -PKVAVF----------------------ARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV 649 (884)
T ss_pred -hcCeEE----------------------EECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH
Confidence 011122 4566677777777777777899999999999999999998666532232
Q ss_pred CCCCCCEEe--CCHhHHHHHHHH
Q 020219 285 RVKGADYAF--ESIHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~--~~l~el~~~l~~ 305 (329)
.+..||+++ +++..+.+++.+
T Consensus 650 a~~aaDivl~dd~~~~i~~~i~~ 672 (884)
T TIGR01522 650 AKEAADMILTDDDFATILSAIEE 672 (884)
T ss_pred HHHhcCEEEcCCCHHHHHHHHHH
Confidence 356899999 669998887654
No 141
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.13 E-value=2.1e-05 Score=73.88 Aligned_cols=111 Identities=17% Similarity=0.191 Sum_probs=68.4
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCC
Q 020219 133 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 209 (329)
Q Consensus 133 pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (329)
||+.++|++| |.+++++|++....+...++++|+..+|+.++++++.......+. .. -...
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e--------~~--------d~~~ 212 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMS--------TE--------DRQY 212 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCcc--------cc--------cccc
Confidence 5556666555 577899999999999999999999999999999886654211000 00 0001
Q ss_pred CcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEE-EEeCCh-hch
Q 020219 210 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTL-FFEDSV-RNI 267 (329)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l-~VGDs~-~Di 267 (329)
..+|.-.||+.... ..+.+|| +|.+....|++.|++.-.++ -|+|=. ||+
T Consensus 213 ~~~~~~~~f~~d~~-~~~~lPK-------Sprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 213 RYVFTKTPFYLNTT-DGKRLPK-------SPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred ceEEecCCeEEeCC-CCCcCCC-------CCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 11222333333322 2223332 36789999999999865444 466654 444
No 142
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.11 E-value=1.7e-05 Score=65.46 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=91.6
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 128 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
.-++++.+.+.+++|. ..+++.|+.........++-.|+. .+.++.
T Consensus 28 gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a------------------------------ 75 (152)
T COG4087 28 GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA------------------------------ 75 (152)
T ss_pred CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec------------------------------
Confidence 3466788888887775 778899999999999999988865 444443
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCC
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR 285 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~ 285 (329)
-.++..-..++++++-+.+.|++|||+.||+-+.+++.+..+-+..+..
T Consensus 76 -------------------------------~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v 124 (152)
T COG4087 76 -------------------------------GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGV 124 (152)
T ss_pred -------------------------------ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCc
Confidence 2335778889999988889999999999999999999888777765443
Q ss_pred ----CCCCCEEeCCHhHHHHHHHH
Q 020219 286 ----VKGADYAFESIHNIKEAIPE 305 (329)
Q Consensus 286 ----~~~ad~i~~~l~el~~~l~~ 305 (329)
...||+++.++.++.+.+..
T Consensus 125 ~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 125 PERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred chHHHhhchhhhhhHHHHHHHhhc
Confidence 45799999999998887654
No 143
>PTZ00174 phosphomannomutase; Provisional
Probab=98.10 E-value=5.4e-05 Score=69.70 Aligned_cols=41 Identities=7% Similarity=-0.071 Sum_probs=35.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeC----ChhchHHHHHcCceEEEE
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGD----s~~Di~~a~~~G~~~v~v 280 (329)
+-.|..+++.++++ ++++++||| +.||++|.+.+|.....+
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v 230 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV 230 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEe
Confidence 57788999999998 599999999 899999999887765553
No 144
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.10 E-value=1.3e-05 Score=73.62 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=62.6
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc-------CceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHH
Q 020219 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV-------GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~-------G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
-.|..+++.+++++++++++++||||+.||+.|++.+ |..++.+..+..+..|++++++..++.++|..+.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 3456999999999999999999999999999999998 6677777777778899999999999999987653
No 145
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.07 E-value=1.9e-05 Score=72.95 Aligned_cols=47 Identities=19% Similarity=0.236 Sum_probs=37.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
+-.|..+++++++++++++++++++|||.||++|. ..+...|.|...
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 45678999999999999999999999999999999 555567766543
No 146
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.05 E-value=5.9e-05 Score=75.24 Aligned_cols=123 Identities=22% Similarity=0.156 Sum_probs=68.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhc-C--------CccccceeeeeccCCCCCCCCCCCChhhHHHH
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL-G--------LEDCFEGIICFETLNPTHKNTVSDDEDDIAFV 197 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~-g--------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (329)
...|.+..+|+.| |.+++++||.+..++...++.+ | +.++||.|++....+.+
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~F--------------- 247 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGF--------------- 247 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHH---------------
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcc---------------
Confidence 3357888888877 4678999999999988888775 2 45789999988755431
Q ss_pred HhhhccccCCCCCcccc-cccccCCCCCccc-cCCC-CCCCCCC---cHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHH
Q 020219 198 ESAASTTTSANGPQIFD-IIGHFAQPNPSLV-ALPK-TPIACKP---SELAIEKALKIASINPQRTLFFEDSV-RNIQAG 270 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~~~~~Kp---~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a 270 (329)
|. =+||+..+..+-. ...+ .....|. ..--...+.+.+|....+++||||+. .||-..
T Consensus 248 ---------------F~~~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~ 312 (448)
T PF05761_consen 248 ---------------FTEGRPFREVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKS 312 (448)
T ss_dssp ---------------HCT---EEEEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHH
T ss_pred ---------------cCCCCceEEEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhh
Confidence 10 0112222211110 0000 0000111 11235566777888889999999999 798887
Q ss_pred HHc-CceEEEEcC
Q 020219 271 KRV-GLDTVLIGK 282 (329)
Q Consensus 271 ~~~-G~~~v~v~~ 282 (329)
+.. ||.+++|-.
T Consensus 313 k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 313 KKRHGWRTAAIIP 325 (448)
T ss_dssp HHHH-SEEEEE-T
T ss_pred ccccceEEEEEeh
Confidence 776 999999743
No 147
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.05 E-value=3.8e-06 Score=69.21 Aligned_cols=49 Identities=20% Similarity=0.135 Sum_probs=40.6
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeC---CChhhHHHHHHhcCCccccceeee
Q 020219 127 ENLKPDPVLRSLLLSLPLRKIIFTN---ADKVHAVKVLSRLGLEDCFEGIIC 175 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L~~~~~ivT~---~~~~~~~~~l~~~gl~~~f~~i~~ 175 (329)
..+.++|.+++++++++.++.++|. +....+.+.|+.+++..+|+.++.
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi 89 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI 89 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe
Confidence 3578899999999999877666654 567778889999999999998875
No 148
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.03 E-value=2e-05 Score=84.76 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=82.4
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
-.++||+.+.|++| +++++++|+.+...+...++++|+...|..+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-------------------------------- 696 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-------------------------------- 696 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------
Confidence 45689999988877 5788999999999999999999986533321
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ- 284 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~- 284 (329)
. |+-..+++++++..+++++||||+.||+.+++.+|+..++-+...
T Consensus 697 -------------------------------~--p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~ 743 (834)
T PRK10671 697 -------------------------------L--PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDV 743 (834)
T ss_pred -------------------------------C--HHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH
Confidence 1 122345666777778899999999999999999999665543222
Q ss_pred CCCCCCE--EeCCHhHHHHHHH
Q 020219 285 RVKGADY--AFESIHNIKEAIP 304 (329)
Q Consensus 285 ~~~~ad~--i~~~l~el~~~l~ 304 (329)
....+|. ..+++.++.++++
T Consensus 744 a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 744 AIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHHhCCEEEecCCHHHHHHHHH
Confidence 3445555 4467888888775
No 149
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.88 E-value=0.00031 Score=71.13 Aligned_cols=100 Identities=13% Similarity=0.043 Sum_probs=61.0
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChhhHHHHHHh-cCCccccceeeeec----cCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 131 PDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFE----TLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 131 ~~pgv~~lL~~L~~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
+.|.+.+.+++.+.+ +++|......++.++++ +|++ .+++.+ ..+.++|..
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~~TG~i------------------- 166 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGRATGFM------------------- 166 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCEEeeee-------------------
Confidence 557777777776644 99999999999999976 7854 444443 122222200
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
.. .+.+.|.-|...+ .+.+|.+... ++.|||.+|..+...++...+.-.
T Consensus 167 --------------~g---------~~~c~Ge~Kv~rl---~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 167 --------------KK---------PGVLVGDHKRDAV---LKEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred --------------cC---------CCCCccHHHHHHH---HHHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 00 0001222233333 3556654444 899999999999999996654433
No 150
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.75 E-value=0.00011 Score=79.71 Aligned_cols=137 Identities=13% Similarity=0.144 Sum_probs=89.4
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccc----eeeeeccCCCCCCCCCCCChhhHHHHHhhhc
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFE----GIICFETLNPTHKNTVSDDEDDIAFVESAAS 202 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (329)
++.|++++.++.| +++++++|+.....+....+++|+...-. ..+.+.... ...+ -+....+.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~--------~~~~-~~~~~~~~- 606 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD--------EMGP-AKQRAACR- 606 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHh--------hCCH-HHHHHhhh-
Confidence 4578999988776 58899999999899999999999853211 122221111 0000 00000000
Q ss_pred cccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcC
Q 020219 203 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~ 282 (329)
..-+ .++-.|+-..++++.++-..+.+.|+||+.||+.|.+.+++..++- .
T Consensus 607 ------~~~v----------------------~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~ 657 (917)
T TIGR01116 607 ------SAVL----------------------FSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-S 657 (917)
T ss_pred ------cCeE----------------------EEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-C
Confidence 0001 1344455567777777766788999999999999999999976654 3
Q ss_pred CC--CCCCCCEEeCC--HhHHHHHHHH
Q 020219 283 SQ--RVKGADYAFES--IHNIKEAIPE 305 (329)
Q Consensus 283 ~~--~~~~ad~i~~~--l~el~~~l~~ 305 (329)
+. .+..||+++.+ +..+.+++.+
T Consensus 658 g~~~ak~aAD~vl~dd~f~~i~~~i~~ 684 (917)
T TIGR01116 658 GTEVAKEASDMVLADDNFATIVAAVEE 684 (917)
T ss_pred CcHHHHHhcCeEEccCCHHHHHHHHHH
Confidence 32 46689999987 8888877643
No 151
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.72 E-value=0.00015 Score=67.64 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=61.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc----CceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHhccC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV----GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDM 311 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~----G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~~~ 311 (329)
+-.|..+++++++.+++..+++++|||+.||+.|.+.+ |+. +.++ .....|.+.+.+..++..+|..+.....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg--~a~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVG--TGATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEEC--CCCCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 45778999999999999999999999999999999988 544 3443 3356789999999999999988776444
No 152
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.71 E-value=0.00032 Score=65.99 Aligned_cols=111 Identities=20% Similarity=0.222 Sum_probs=67.3
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCC
Q 020219 133 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 209 (329)
Q Consensus 133 pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (329)
|++.++|++| |++++++|+++...+...++.+|+..+|+.++++++.....+ .-...-...
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~----------------~~~~~d~~~ 214 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYS----------------RRVIVDNKY 214 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccc----------------cceeecccc
Confidence 4455555554 678999999999999999999999999999998876443110 000000111
Q ss_pred CcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEE-EEeCCh-hch
Q 020219 210 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTL-FFEDSV-RNI 267 (329)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l-~VGDs~-~Di 267 (329)
.-+|.-.||+.-..+.. .+| | +|.+....|++.|++.-.++ -|+|=. ||+
T Consensus 215 ~~~~~~~~f~~d~~~~~-~lP------K-SprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 215 KMVFVKKPFYLDVTDVK-NLP------K-SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred eeEEecCceeEeCCccc-CCC------C-CCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 22222333333322222 333 2 36789999999999864444 466655 444
No 153
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.66 E-value=0.00063 Score=62.05 Aligned_cols=59 Identities=10% Similarity=0.116 Sum_probs=42.0
Q ss_pred CHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhh---HHHHHHhcCCccccceeee
Q 020219 112 DYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCFEGIIC 175 (329)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~---~~~~l~~~gl~~~f~~i~~ 175 (329)
+...+.+.+.. ...++.|++.++++.+ |.+++++|+.+... ....|.+.|+..+ +.++-
T Consensus 106 ~~~~~~~wv~~----~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiL 170 (229)
T TIGR01675 106 DPTAFWLWLGK----GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLIL 170 (229)
T ss_pred CHHHHHHHHHc----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-Ceeee
Confidence 34555555543 4567789999998876 68899999988665 6778888897653 55443
No 154
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.56 E-value=8.2e-05 Score=65.92 Aligned_cols=44 Identities=20% Similarity=0.131 Sum_probs=41.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEE
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..++
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 68889999999999999999999999999999999999988764
No 155
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.48 E-value=0.00057 Score=72.62 Aligned_cols=108 Identities=14% Similarity=0.174 Sum_probs=75.9
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
-.++|++++.++.| +++.+++|+.+...+..+.+++|+..++ +..+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~~~p------------------------- 615 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------GLLP------------------------- 615 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------CCCH-------------------------
Confidence 36689999998877 5889999999999999999999985211 1000
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ- 284 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~- 284 (329)
.-|+..+ ++++ .+.+++||||+.||..+++.+++..++-...+
T Consensus 616 -------------------------------~~K~~~v----~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~ 659 (741)
T PRK11033 616 -------------------------------EDKVKAV----TELN-QHAPLAMVGDGINDAPAMKAASIGIAMGSGTDV 659 (741)
T ss_pred -------------------------------HHHHHHH----HHHh-cCCCEEEEECCHHhHHHHHhCCeeEEecCCCHH
Confidence 1123333 4444 23689999999999999999997776653222
Q ss_pred CCCCCCEEe--CCHhHHHHHH
Q 020219 285 RVKGADYAF--ESIHNIKEAI 303 (329)
Q Consensus 285 ~~~~ad~i~--~~l~el~~~l 303 (329)
....+|+++ +++..+.+.+
T Consensus 660 a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 660 ALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred HHHhCCEEEecCCHHHHHHHH
Confidence 345577766 5677776665
No 156
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.40 E-value=0.00079 Score=70.51 Aligned_cols=110 Identities=8% Similarity=0.056 Sum_probs=83.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++.|++++.+++| +++.+++|+.+...+..+.+++|+.+.|..
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~---------------------------------- 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE---------------------------------- 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC----------------------------------
Confidence 5678999988776 588999999999999999999998642211
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
-.|+-..++.+.++-...-+.|+||+.||..+.+.+.+..++- .+.
T Consensus 487 -------------------------------~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdv 534 (673)
T PRK14010 487 -------------------------------CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMS 534 (673)
T ss_pred -------------------------------CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHH
Confidence 1234455666666655567999999999999999999877776 343
Q ss_pred CCCCCCEEe--CCHhHHHHHHHH
Q 020219 285 RVKGADYAF--ESIHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~--~~l~el~~~l~~ 305 (329)
.+..+|.++ +++..+.+.++.
T Consensus 535 AkeAADiVLldd~ls~Iv~av~~ 557 (673)
T PRK14010 535 AKEAANLIDLDSNPTKLMEVVLI 557 (673)
T ss_pred HHHhCCEEEcCCCHHHHHHHHHH
Confidence 477888887 457777776643
No 157
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.39 E-value=0.0087 Score=55.50 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=42.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHH----HHHcCceEEEEcCCCCCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQA----GKRVGLDTVLIGKSQRVK 287 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~----a~~~G~~~v~v~~~~~~~ 287 (329)
+-++..++..++++.|..|+.++||+|+..++.. +++.|+...++-+...+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~~ 215 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAEE 215 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchhh
Confidence 4578899999999999999999999999976654 455688888887665433
No 158
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.35 E-value=0.0021 Score=58.04 Aligned_cols=48 Identities=23% Similarity=0.392 Sum_probs=42.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
.|-....|..+.+..|.++.|++|.-|..+-..+|+.+|+.+.++-++
T Consensus 179 ~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 179 LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRP 226 (254)
T ss_pred ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecC
Confidence 366678999999999999999999999999999999999998776444
No 159
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.35 E-value=0.00032 Score=60.30 Aligned_cols=59 Identities=27% Similarity=0.318 Sum_probs=45.4
Q ss_pred HHHHcCCCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCCCCCCCC---EEeCCHhHHHHHHHHHHh
Q 020219 246 ALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQRVKGAD---YAFESIHNIKEAIPELWE 308 (329)
Q Consensus 246 ~l~~~~v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~~~~~ad---~i~~~l~el~~~l~~~~~ 308 (329)
+.+.+.++ +++.|+. |=.+.|+++|++.+.+++.+....+. ..+.++.+..+++...+.
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~k 191 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLK 191 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhc
Confidence 45667775 8999999 67888999999999999888644443 356678888888776554
No 160
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.31 E-value=0.00053 Score=62.65 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=29.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChh---hHHHHHHhcCCcc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLED 168 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~---~~~~~l~~~gl~~ 168 (329)
..+.||+.+|++.+ |..++++|+.+.. .....|++.|+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG 159 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence 36678899988765 6889999986544 5566788889753
No 161
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.30 E-value=0.00083 Score=70.35 Aligned_cols=110 Identities=10% Similarity=0.131 Sum_probs=78.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
.+.|++++.+++| +++.+++|+.+...+....+++|+++.+..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~---------------------------------- 491 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE---------------------------------- 491 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC----------------------------------
Confidence 5678999988877 588999999999999999999998642211
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-C
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R 285 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-~ 285 (329)
.. |+-...+++.++-....+.|+||+.||..+.+.+++..++-+..+ .
T Consensus 492 -----------------------------~~--PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~a 540 (675)
T TIGR01497 492 -----------------------------AT--PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAA 540 (675)
T ss_pred -----------------------------CC--HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence 12 223333444443344579999999999999999998877753222 4
Q ss_pred CCCCCEEeC--CHhHHHHHHH
Q 020219 286 VKGADYAFE--SIHNIKEAIP 304 (329)
Q Consensus 286 ~~~ad~i~~--~l~el~~~l~ 304 (329)
+..+|+++- ++..+.++++
T Consensus 541 keaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 541 KEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHhCCEEECCCCHHHHHHHHH
Confidence 667788764 4777766654
No 162
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.29 E-value=0.0022 Score=59.76 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=33.7
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCCh---hhHHHHHHhcCCccccceee
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNADK---VHAVKVLSRLGLEDCFEGII 174 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~~~---~~~~~~l~~~gl~~~f~~i~ 174 (329)
...++.|++.+|.+.+ |.+++++|+.+. ......|++.|+.. .+.++
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~-~~~Li 194 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT-WEKLI 194 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC-cceee
Confidence 4567789999998766 688999999764 33566777788764 24444
No 163
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.27 E-value=0.0021 Score=58.54 Aligned_cols=56 Identities=18% Similarity=0.273 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhh----HHHHHHhcCCccc
Q 020219 110 DFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVH----AVKVLSRLGLEDC 169 (329)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~----~~~~l~~~gl~~~ 169 (329)
+++++.+.+++.. ...++.||+.+|++.. +..++.+||...+. ...-|+++|+...
T Consensus 106 ~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~ 168 (274)
T COG2503 106 GFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQV 168 (274)
T ss_pred CCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccc
Confidence 3445667777765 4567789999999876 67789999976554 5667788888643
No 164
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.24 E-value=0.0078 Score=54.48 Aligned_cols=165 Identities=15% Similarity=0.182 Sum_probs=95.0
Q ss_pred CCCCChhHHHHHHhCCC--cEEEEeCCChhhHHHHHHhcCCc-c-ccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 128 NLKPDPVLRSLLLSLPL--RKIIFTNADKVHAVKVLSRLGLE-D-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~~--~~~ivT~~~~~~~~~~l~~~gl~-~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
..++.||+.+.+..+.. .-+++|.....+++.....+|+. . ..+.-+..++..... +.+ -+.+. .--.
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~Pe-----eeR--~E~L~-~~~~ 152 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPE-----EER--EELLS-IIDV 152 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCCh-----HHH--HHHHH-hcCc
Confidence 36778999999998864 45688888888899999888883 1 122223333232211 111 01111 1122
Q ss_pred ccCCCCCcccc-cccccCCCCCcc-------ccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHc--
Q 020219 204 TTSANGPQIFD-IIGHFAQPNPSL-------VALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV-- 273 (329)
Q Consensus 204 ~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~-- 273 (329)
.++..+.+.|. ++.+|.+--|+- ++... +.-+..+++-.++.-+++-+ +++||||.+|++|.+.+
T Consensus 153 ~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG----gg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rg 227 (315)
T COG4030 153 IASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG----GGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARG 227 (315)
T ss_pred cccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc----CcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhc
Confidence 23333444443 444455433321 11111 23445677777777776655 99999999999998876
Q ss_pred --CceEEEEcCCCCCCCCCEEeCCH--hHHHHHHHH
Q 020219 274 --GLDTVLIGKSQRVKGADYAFESI--HNIKEAIPE 305 (329)
Q Consensus 274 --G~~~v~v~~~~~~~~ad~i~~~l--~el~~~l~~ 305 (329)
|...++.+..+..+.||..+-+. ..+.+.|+-
T Consensus 228 rGglAvaFNGNeYal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 228 RGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cCceEEEecCCcccccccceEEeccchhhhhHHHHH
Confidence 34455556666777888755553 334455543
No 165
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.24 E-value=0.0012 Score=71.26 Aligned_cols=135 Identities=10% Similarity=0.237 Sum_probs=87.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++.|++++.++.| +++++++|+.+...+..+.+++|+.. +.++++.+... . +.-+..+.+...
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~--------~-~~~el~~~~~~~--- 580 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEE--------L-SDEELARELRKY--- 580 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhh--------C-CHHHHHHHhhhC---
Confidence 4578888888776 68899999999999999999999953 23444433221 0 000111111000
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
.+ | +.-.|+-..++.+.++-....+.|+||+.||..+.+.+.+..++- .+.
T Consensus 581 ----~v------f----------------Ar~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdv 633 (867)
T TIGR01524 581 ----HI------F----------------ARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADI 633 (867)
T ss_pred ----eE------E----------------EECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHH
Confidence 11 1 223344455556655555567999999999999999999887776 333
Q ss_pred CCCCCCEEe--CCHhHHHHHHHH
Q 020219 285 RVKGADYAF--ESIHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~--~~l~el~~~l~~ 305 (329)
.+..||+++ +++..+..++.+
T Consensus 634 Ak~aADiVLldd~~~~I~~ai~~ 656 (867)
T TIGR01524 634 AKEASDIILLEKSLMVLEEGVIE 656 (867)
T ss_pred HHHhCCEEEecCChHHHHHHHHH
Confidence 478899888 457777666643
No 166
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.20 E-value=0.0012 Score=71.52 Aligned_cols=135 Identities=16% Similarity=0.253 Sum_probs=90.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++.|++++.++.| ++++.++|+.+...+..+.+++|+.. +.++++.+.... +..+....++.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l------~~~el~~~~~~------- 614 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL------SDDELANLAER------- 614 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC------CHHHHHHHHhh-------
Confidence 4467888887766 68899999999999999999999952 345554433211 00011111110
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
..+| ..-.|+-..++.+.++-...-+.|+||+.||..+.+.+.+..++- .+.
T Consensus 615 ---~~Vf----------------------Ar~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdv 668 (902)
T PRK10517 615 ---TTLF----------------------ARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDI 668 (902)
T ss_pred ---CcEE----------------------EEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHH
Confidence 0111 334455666666666656677999999999999999999887775 333
Q ss_pred CCCCCCEEe--CCHhHHHHHHHH
Q 020219 285 RVKGADYAF--ESIHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~--~~l~el~~~l~~ 305 (329)
.+..||+++ +++..+.+++.+
T Consensus 669 AkeaADiVLldd~~~~I~~ai~~ 691 (902)
T PRK10517 669 AREAADIILLEKSLMVLEEGVIE 691 (902)
T ss_pred HHHhCCEEEecCChHHHHHHHHH
Confidence 588999988 457777766644
No 167
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.13 E-value=0.0021 Score=67.40 Aligned_cols=110 Identities=8% Similarity=0.143 Sum_probs=82.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
.+.||+++.+++| +++.+++|+.+...+..+.+++|+++. +.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A------------------------------- 489 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LA------------------------------- 489 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----Ec-------------------------------
Confidence 4578999988777 588999999999999999999998642 21
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
.-.|+-...+.+.++-...-+.|+||+.||..+.+.+.+..++- .+.
T Consensus 490 ------------------------------~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdv 538 (679)
T PRK01122 490 ------------------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQA 538 (679)
T ss_pred ------------------------------cCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHH
Confidence 11234455555656555566999999999999999999887776 343
Q ss_pred CCCCCCEEeC--CHhHHHHHHHH
Q 020219 285 RVKGADYAFE--SIHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~~--~l~el~~~l~~ 305 (329)
.+..+|.++- ++..+.++++.
T Consensus 539 AkeAADiVLldd~~s~Iv~av~~ 561 (679)
T PRK01122 539 AKEAGNMVDLDSNPTKLIEVVEI 561 (679)
T ss_pred HHHhCCEEEeCCCHHHHHHHHHH
Confidence 4778888775 47777777643
No 168
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.12 E-value=0.0022 Score=69.71 Aligned_cols=135 Identities=17% Similarity=0.249 Sum_probs=90.4
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++.|++++.++.| +++++++|+.+...+..+.+++|+.. +.++++.+... . +.-+..+.+..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~--------~-~~~el~~~v~~---- 614 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEA--------M-DDAALAREVEE---- 614 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhh--------C-CHHHHHHHhhh----
Confidence 4568888888776 58899999999999999999999952 33444433221 0 00011111110
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
..+| +.-.|+--.++.+.++-...-+.|+||+.||..+.+.+.+..++- .+.
T Consensus 615 ---~~Vf----------------------Ar~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdv 668 (903)
T PRK15122 615 ---RTVF----------------------AKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADI 668 (903)
T ss_pred ---CCEE----------------------EEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHH
Confidence 0111 333455566667766656677999999999999999999887765 333
Q ss_pred CCCCCCEEe--CCHhHHHHHHHH
Q 020219 285 RVKGADYAF--ESIHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~--~~l~el~~~l~~ 305 (329)
.+..||+++ +++..+.+++++
T Consensus 669 AkeaADiVLldd~f~~Iv~ai~~ 691 (903)
T PRK15122 669 AKESADIILLEKSLMVLEEGVIK 691 (903)
T ss_pred HHHhcCEEEecCChHHHHHHHHH
Confidence 488999988 568877777644
No 169
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.12 E-value=0.0018 Score=71.33 Aligned_cols=138 Identities=11% Similarity=0.030 Sum_probs=88.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcccc----------ceeeeeccCCCCCCCCCCCChhhHHH
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF----------EGIICFETLNPTHKNTVSDDEDDIAF 196 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f----------~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (329)
++.|++++.++.| +++++++|+.....+..+.+++|+.+.. ..++++..... ..+ -+.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~--------l~~-~~l 716 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA--------LSD-EEV 716 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh--------cCH-HHH
Confidence 5678888888776 6899999999999999999999995321 12333322111 100 000
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCce
Q 020219 197 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~ 276 (329)
-+.+.. ..+| +.-.|+-...+.+.++-....+.|+||+.||..+.+.+.+.
T Consensus 717 ~~~~~~-------~~V~----------------------ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG 767 (1053)
T TIGR01523 717 DDLKAL-------CLVI----------------------ARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG 767 (1053)
T ss_pred HHHhhc-------CeEE----------------------EecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc
Confidence 000000 0111 23334555555665555556799999999999999999988
Q ss_pred EEEEcCCC--CCCCCCEEeCC--HhHHHHHHHH
Q 020219 277 TVLIGKSQ--RVKGADYAFES--IHNIKEAIPE 305 (329)
Q Consensus 277 ~v~v~~~~--~~~~ad~i~~~--l~el~~~l~~ 305 (329)
.++-..+. .+..||+++.+ +..+..++.+
T Consensus 768 IAmg~~gt~vak~aADivl~dd~f~~I~~~i~~ 800 (1053)
T TIGR01523 768 IAMGINGSDVAKDASDIVLSDDNFASILNAIEE 800 (1053)
T ss_pred EecCCCccHHHHHhcCEEEecCCHHHHHHHHHH
Confidence 77642332 57789999865 8877776643
No 170
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.10 E-value=0.0041 Score=49.43 Aligned_cols=44 Identities=25% Similarity=0.197 Sum_probs=28.5
Q ss_pred hhHHHHHHhC---CCcEEEEeCCCh---hhHHHHHHhcCCccccceeeee
Q 020219 133 PVLRSLLLSL---PLRKIIFTNADK---VHAVKVLSRLGLEDCFEGIICF 176 (329)
Q Consensus 133 pgv~~lL~~L---~~~~~ivT~~~~---~~~~~~l~~~gl~~~f~~i~~~ 176 (329)
||+.++|+.| +.+++++||++. ......++.+|+.-..+.++++
T Consensus 17 pga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts 66 (101)
T PF13344_consen 17 PGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITS 66 (101)
T ss_dssp TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEH
T ss_pred cCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEECh
Confidence 5555555544 688999999753 3455667888998666777775
No 171
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.10 E-value=0.0018 Score=70.71 Aligned_cols=137 Identities=9% Similarity=-0.000 Sum_probs=89.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++.|++++.++.| +++++++|+.+...+..+.+++|+.+.-..++.+++.... .+ +.+..+-.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l--------~~--~el~~~i~---- 644 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL--------VY--EEMDPILP---- 644 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC--------CH--HHHHHHhc----
Confidence 5578888888776 6889999999999999999999996433445555433210 00 00111000
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
...+| +.-.|+-..++.+.++-...-+.|+||+.||..+.+++.+..++-..+.
T Consensus 645 --~~~Vf----------------------ar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv 700 (941)
T TIGR01517 645 --KLRVL----------------------ARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV 700 (941)
T ss_pred --cCeEE----------------------EECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence 00111 2333444555555555445679999999999999999988777642332
Q ss_pred CCCCCCEEeC--CHhHHHHHHH
Q 020219 285 RVKGADYAFE--SIHNIKEAIP 304 (329)
Q Consensus 285 ~~~~ad~i~~--~l~el~~~l~ 304 (329)
.+..||+++. ++..+..++.
T Consensus 701 Ak~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 701 AKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred HHHhCCEEEecCCHHHHHHHHH
Confidence 5778899887 6888877763
No 172
>PLN02382 probable sucrose-phosphatase
Probab=97.06 E-value=0.0018 Score=64.25 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=56.9
Q ss_pred CCCcHHHHHHHHHHc---CCCCCcEEEEeCChhchHHHHHcC-ceEEEEcCCCC-C--------CCCCEEeC---CHhHH
Q 020219 236 CKPSELAIEKALKIA---SINPQRTLFFEDSVRNIQAGKRVG-LDTVLIGKSQR-V--------KGADYAFE---SIHNI 299 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~---~v~~~e~l~VGDs~~Di~~a~~~G-~~~v~v~~~~~-~--------~~ad~i~~---~l~el 299 (329)
+-.|..+++++++++ |++++++++|||+.||++|.+.+| ..+++-+.... + ..++++.. .-+-+
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 456789999999999 999999999999999999999999 57776554432 1 12344433 24447
Q ss_pred HHHHHHHHhccC
Q 020219 300 KEAIPELWESDM 311 (329)
Q Consensus 300 ~~~l~~~~~~~~ 311 (329)
.++|.++...+.
T Consensus 253 ~~al~~f~l~~~ 264 (413)
T PLN02382 253 IQAIGHFNLGPN 264 (413)
T ss_pred HHHHHHhCCCCC
Confidence 788887776554
No 173
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.03 E-value=0.0001 Score=62.92 Aligned_cols=49 Identities=27% Similarity=0.301 Sum_probs=38.7
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCC-ccccceeeeec
Q 020219 129 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL-EDCFEGIICFE 177 (329)
Q Consensus 129 ~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl-~~~f~~i~~~~ 177 (329)
+.+.||+.++|+++. +.+++.|.+...++..+++.+.- ..+|+.+++.+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~ 86 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRD 86 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGG
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhccccccccccc
Confidence 456799999999884 88999999999999999999876 45788888655
No 174
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.02 E-value=0.0022 Score=67.51 Aligned_cols=110 Identities=13% Similarity=0.248 Sum_probs=79.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
-.+.|+.++.+++| +++.+++|+.+...++.+.+++|++.++..+.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell------------------------------- 584 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL------------------------------- 584 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC-------------------------------
Confidence 35568888877666 68899999999999999999999864333332
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc-CCC
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG-KSQ 284 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~-~~~ 284 (329)
| +=.....++++-....+.||||+.||-.+...+.+..++-. ++-
T Consensus 585 --------------------------------P--edK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv 630 (713)
T COG2217 585 --------------------------------P--EDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV 630 (713)
T ss_pred --------------------------------c--HHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH
Confidence 1 22344444454444679999999999999999987766654 333
Q ss_pred CCCCCCEEeCC--HhHHHHHH
Q 020219 285 RVKGADYAFES--IHNIKEAI 303 (329)
Q Consensus 285 ~~~~ad~i~~~--l~el~~~l 303 (329)
....||.++-+ +..+..++
T Consensus 631 A~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 631 AIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHhCCEEEecCCHHHHHHHH
Confidence 57788876644 77776665
No 175
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.01 E-value=0.011 Score=50.67 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=26.8
Q ss_pred cHHHHHHHHHHcCCCCCc-EEEEeCChhchHHHHHcCce
Q 020219 239 SELAIEKALKIASINPQR-TLFFEDSVRNIQAGKRVGLD 276 (329)
Q Consensus 239 ~~~~~~~~l~~~~v~~~e-~l~VGDs~~Di~~a~~~G~~ 276 (329)
|.+.++.+.+.+.-..-. ++.+||+.+|+++-+++|+.
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 456677777655422222 34588889999999999987
No 176
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.87 E-value=0.0047 Score=67.22 Aligned_cols=139 Identities=16% Similarity=0.153 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccc--eeeeeccCCCCCCCCCCCChhhHHHHHhhhcc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFE--GIICFETLNPTHKNTVSDDEDDIAFVESAAST 203 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
-++.+++++.++.| +++++++|+.....+..+.+++|+...-+ .++.+..... +.|. +..+.+...
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~--------l~~~-el~~~~~~~ 616 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDA--------LSDE-ELAELVEEL 616 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhh--------cCHH-HHHHHhhhC
Confidence 35678888887766 69999999999999999999999865443 3555543332 1111 111111111
Q ss_pred ccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 204 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
. + +++=.|+-..++.+.++-...-+.|+||+.||..|.++|.+.+.+...|
T Consensus 617 ~-------V----------------------fARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~G 667 (917)
T COG0474 617 S-------V----------------------FARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEG 667 (917)
T ss_pred c-------E----------------------EEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence 1 1 1344455556666666555677999999999999999999888787655
Q ss_pred C--CCCCCCEEeCC--HhHHHHHHHH
Q 020219 284 Q--RVKGADYAFES--IHNIKEAIPE 305 (329)
Q Consensus 284 ~--~~~~ad~i~~~--l~el~~~l~~ 305 (329)
. .+..+|+++.+ +..+..++.+
T Consensus 668 tdaak~Aadivl~dd~~~~i~~av~e 693 (917)
T COG0474 668 TDAAKEAADIVLLDDNFATIVLAVVE 693 (917)
T ss_pred HHHHHhhcceEeecCcHHHHHHHHHH
Confidence 4 35567665543 5555555543
No 177
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.86 E-value=0.0025 Score=67.98 Aligned_cols=140 Identities=17% Similarity=0.115 Sum_probs=86.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
++.|++++.++.| +++++++|+.+...+..+.+++|+... +++++.... +.+. +..+.-+.-+.+....
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~--~~~~-~~~~~~~~~~~~~~~~-- 513 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLK--GDNR-DDLPSGELGEMVEDAD-- 513 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcC--Ccch-hhCCHHHHHHHHHhCC--
Confidence 5678888888776 588999999999999999999999642 222221110 0000 0000001111111111
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC--
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 284 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~-- 284 (329)
+ | .+-.|+-...+.+.++-...-+.|+||+.||..+.+.+.+..++- .+.
T Consensus 514 -----v------f----------------Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdv 565 (755)
T TIGR01647 514 -----G------F----------------AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDA 565 (755)
T ss_pred -----E------E----------------EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHH
Confidence 1 1 233345556666666656677999999999999999999887764 333
Q ss_pred CCCCCCEEeCC--HhHHHHHHHH
Q 020219 285 RVKGADYAFES--IHNIKEAIPE 305 (329)
Q Consensus 285 ~~~~ad~i~~~--l~el~~~l~~ 305 (329)
.+..||.++-+ +..+..+++.
T Consensus 566 AkeaADivLl~d~l~~I~~ai~~ 588 (755)
T TIGR01647 566 ARSAADIVLTEPGLSVIVDAILE 588 (755)
T ss_pred HHHhCCEEEEcCChHHHHHHHHH
Confidence 47778887744 7766666543
No 178
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.83 E-value=0.0032 Score=66.81 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=56.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
+-.|..+++.+++ +++++.+++|||+.||++|.+.++.....+.-+.....|++.+.+.+++.+.|..+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 4567899999998 778899999999999999999974322333334467889999999999988888765
No 179
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=96.77 E-value=0.0051 Score=53.67 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=27.4
Q ss_pred HHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc
Q 020219 244 EKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 244 ~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
...+...++ -++.|||.+||.+|+.+|+..|-+.
T Consensus 178 t~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 178 TQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred cHHHHhcCc----eEEecCCchhhhHHHhcCccceeEE
Confidence 356666666 4899999999999999999876653
No 180
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.71 E-value=0.0059 Score=67.10 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=86.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccc------------------------eeeeeccCCCC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFE------------------------GIICFETLNPT 182 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~------------------------~i~~~~~~~~~ 182 (329)
++.|++++.++.+ +++++++|+.....+....+++|+-..-. .++++....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~-- 645 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK-- 645 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh--
Confidence 4578888888776 58899999999999999999999842110 111111111
Q ss_pred CCCCCCCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 020219 183 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED 262 (329)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGD 262 (329)
...+. +..+.+....+ -+| +.-.|+-...+.+.++-...-+.++||
T Consensus 646 ------~l~~~-el~~~~~~~~~-----~Vf----------------------aR~sPeqK~~IV~~lq~~g~vv~~~GD 691 (997)
T TIGR01106 646 ------DMTSE-QLDEILKYHTE-----IVF----------------------ARTSPQQKLIIVEGCQRQGAIVAVTGD 691 (997)
T ss_pred ------hCCHH-HHHHHHHhcCC-----EEE----------------------EECCHHHHHHHHHHHHHCCCEEEEECC
Confidence 00000 00000000000 011 333445555555555544567999999
Q ss_pred ChhchHHHHHcCceEEEEcCCC--CCCCCCEEeCC--HhHHHHHHHH
Q 020219 263 SVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFES--IHNIKEAIPE 305 (329)
Q Consensus 263 s~~Di~~a~~~G~~~v~v~~~~--~~~~ad~i~~~--l~el~~~l~~ 305 (329)
+.||..|.+.+.+..++-..|. .+..||+++.+ +..+.+++.+
T Consensus 692 G~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~ 738 (997)
T TIGR01106 692 GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 738 (997)
T ss_pred CcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHH
Confidence 9999999999998877753333 47788998887 8777776643
No 181
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.52 E-value=0.0047 Score=64.91 Aligned_cols=143 Identities=15% Similarity=0.162 Sum_probs=91.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
-+|+|++++.++.+ |+|+.++|+.+.+.+..+.++.|+...-+. +++ ..+.|.+..++.+. +.-..+.-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~---~~~TG~efD~ls~~-~~~~~~~~--- 654 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSS---MALTGSEFDDLSDE-ELDDAVRR--- 654 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-ccc---cccchhhhhcCCHH-HHHHHhhc---
Confidence 35678888777665 799999999999999999999997543332 111 11222222121111 11111111
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCC-
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ- 284 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~- 284 (329)
..+| ..-.|....++.+.++-..+=+.|-||+.||-.+.|.+.+.++|-..|.
T Consensus 655 ----~~vF----------------------aR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 655 ----VLVF----------------------ARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred ----ceEE----------------------EecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccH
Confidence 1111 2233455666777777666779999999999999999999988875554
Q ss_pred -CCCCCCEEeCC--HhHHHHHHHH
Q 020219 285 -RVKGADYAFES--IHNIKEAIPE 305 (329)
Q Consensus 285 -~~~~ad~i~~~--l~el~~~l~~ 305 (329)
.+..+|.|+.| ++.+..++++
T Consensus 709 VaKeAsDMVL~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 709 VAKEASDMVLADDNFSTIVAAVEE 732 (972)
T ss_pred hhHhhhhcEEecCcHHHHHHHHHH
Confidence 47788888755 6666666554
No 182
>PLN02645 phosphoglycolate phosphatase
Probab=96.17 E-value=0.027 Score=53.68 Aligned_cols=86 Identities=16% Similarity=0.095 Sum_probs=62.4
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChh---hHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccc
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 204 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (329)
++||+.++|+.| +.+++++||++.. .....++.+|+...++.++++.
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~--------------------------- 97 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS--------------------------- 97 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH---------------------------
Confidence 347777777665 5889999998733 3344557789876677777652
Q ss_pred cCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEE
Q 020219 205 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
......++..+....+.++++++..+.+.++.+|+..+.
T Consensus 98 ------------------------------------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 ------------------------------------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred ------------------------------------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 356666776666555568888888999999999998654
No 183
>PLN02580 trehalose-phosphatase
Probab=96.15 E-value=0.024 Score=55.58 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=57.4
Q ss_pred CCcHHHHHHHHHHcCCCCCc---EEEEeCChhchHHHHHc-----CceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 237 KPSELAIEKALKIASINPQR---TLFFEDSVRNIQAGKRV-----GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~~~e---~l~VGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
-.|..+++.+++.++++..+ .+||||..||..|.+.+ |+. |.+..+.....|.|.+.+..++.++|..+..
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 46678999999999988663 38999999999999963 544 4555555677899999999999999987654
No 184
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=96.14 E-value=0.011 Score=50.84 Aligned_cols=50 Identities=18% Similarity=0.258 Sum_probs=42.5
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCc-ccc-ceeeeec
Q 020219 128 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLE-DCF-EGIICFE 177 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~-~~f-~~i~~~~ 177 (329)
...++||+.++|+.+. +.++++|++...++..+++.++.. .+| +.+++.+
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd 109 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRD 109 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEec
Confidence 4677899999999984 778999999999999999999987 478 6677654
No 185
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.98 E-value=0.021 Score=61.65 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=57.7
Q ss_pred CCCcHHHHHHHHH---HcCCCCCcEEEEeCChhchHHHHHcCce-----------EEEEcCCCCCCCCCEEeCCHhHHHH
Q 020219 236 CKPSELAIEKALK---IASINPQRTLFFEDSVRNIQAGKRVGLD-----------TVLIGKSQRVKGADYAFESIHNIKE 301 (329)
Q Consensus 236 ~Kp~~~~~~~~l~---~~~v~~~e~l~VGDs~~Di~~a~~~G~~-----------~v~v~~~~~~~~ad~i~~~l~el~~ 301 (329)
+-.|..+++.+++ .+|+.++++++|||+.||..|.+.++-. .+.+.-|.....|.+-+.+..++.+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~ 839 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR 839 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence 4577788998875 4689999999999999999999988621 1223334557788899999999999
Q ss_pred HHHHHHh
Q 020219 302 AIPELWE 308 (329)
Q Consensus 302 ~l~~~~~ 308 (329)
+|..+..
T Consensus 840 lL~~L~~ 846 (854)
T PLN02205 840 LMQGLAS 846 (854)
T ss_pred HHHHHHh
Confidence 9988765
No 186
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.97 E-value=0.13 Score=51.85 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=26.1
Q ss_pred hhHHHHHHhCCCcEEEEeCCChhhHHHHHHh-cCCc
Q 020219 133 PVLRSLLLSLPLRKIIFTNADKVHAVKVLSR-LGLE 167 (329)
Q Consensus 133 pgv~~lL~~L~~~~~ivT~~~~~~~~~~l~~-~gl~ 167 (329)
+...+.....+ +.+++|..+...++..++. +|.+
T Consensus 99 ~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 99 MEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 33445555556 8999999999999999998 7753
No 187
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.97 E-value=0.039 Score=58.71 Aligned_cols=109 Identities=16% Similarity=0.209 Sum_probs=72.7
Q ss_pred CChhHHH---HHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCC
Q 020219 131 PDPVLRS---LLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 207 (329)
Q Consensus 131 ~~pgv~~---lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (329)
+.|++.. .|+.++++.+++|+.+...++...+++| ++.+++.
T Consensus 724 vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~ae------------------------------- 768 (951)
T KOG0207|consen 724 VRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAE------------------------------- 768 (951)
T ss_pred cchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEec-------------------------------
Confidence 3455444 5666689999999999999999999999 5556542
Q ss_pred CCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC-CCC
Q 020219 208 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRV 286 (329)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~-~~~ 286 (329)
-+| +--....++++-....+.||||+.||-.+...+.+..+..... -..
T Consensus 769 ----------------------------v~P--~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAi 818 (951)
T KOG0207|consen 769 ----------------------------VLP--EQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAI 818 (951)
T ss_pred ----------------------------cCc--hhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHH
Confidence 122 1223333444444466999999999999988887665544333 346
Q ss_pred CCCCEEe--CCHhHHHHHHH
Q 020219 287 KGADYAF--ESIHNIKEAIP 304 (329)
Q Consensus 287 ~~ad~i~--~~l~el~~~l~ 304 (329)
..||+++ +++.++..++.
T Consensus 819 eaADIVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 819 EAADIVLMRNDLRDVPFAID 838 (951)
T ss_pred hhCCEEEEccchhhhHHHHH
Confidence 6677654 45777666653
No 188
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.77 E-value=0.017 Score=63.90 Aligned_cols=50 Identities=18% Similarity=0.296 Sum_probs=39.0
Q ss_pred CCcEEEEeCChhchHHHHHcCceEEEEcCC--CCCCCCCEEeCCHhHHHHHH
Q 020219 254 PQRTLFFEDSVRNIQAGKRVGLDTVLIGKS--QRVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 254 ~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~--~~~~~ad~i~~~l~el~~~l 303 (329)
..-++++||+.||+.|.+.|.+.....+.. .....+|+++.++..|...|
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 467999999999999999997665333333 24668999999988887765
No 189
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.40 E-value=0.066 Score=47.77 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=32.5
Q ss_pred CChhHHHHHHhC--CCcEEEEeCCChhhHHHHHHhcCCc
Q 020219 131 PDPVLRSLLLSL--PLRKIIFTNADKVHAVKVLSRLGLE 167 (329)
Q Consensus 131 ~~pgv~~lL~~L--~~~~~ivT~~~~~~~~~~l~~~gl~ 167 (329)
..|++.+||+.+ .+.++|.|++...++..++..+|+.
T Consensus 46 kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 46 MRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred eCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 469999999988 4889999999999999999998763
No 190
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.31 E-value=0.11 Score=57.54 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=49.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCCCCCCCEEe--CCHhHHHHHHHH
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAF--ESIHNIKEAIPE 305 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~--~~l~el~~~l~~ 305 (329)
+.=.|+--..+.+.++-...-+.|+||+.||..+.++|.+..++-.. +....|+++. +++..+..+|++
T Consensus 783 AR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 783 ARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred EecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cceeecccccCCCcHHHHHHHHHH
Confidence 34455566666666665556799999999999999999887777543 3345677774 467777777754
No 191
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.19 E-value=0.073 Score=48.15 Aligned_cols=39 Identities=15% Similarity=0.084 Sum_probs=25.4
Q ss_pred HHHHHHHHHcC-CCCCc-EEEEeCChhchHHHHHcCceEEE
Q 020219 241 LAIEKALKIAS-INPQR-TLFFEDSVRNIQAGKRVGLDTVL 279 (329)
Q Consensus 241 ~~~~~~l~~~~-v~~~e-~l~VGDs~~Di~~a~~~G~~~v~ 279 (329)
.+...+++.+. +...+ ++.+||++||+.+.......++.
T Consensus 194 ~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV 234 (274)
T COG3769 194 QAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIV 234 (274)
T ss_pred HHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheee
Confidence 34444444332 33445 88999999999998877654443
No 192
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.10 E-value=0.53 Score=46.16 Aligned_cols=118 Identities=17% Similarity=0.095 Sum_probs=71.7
Q ss_pred HHHHHHhCCCcEEEEeCCChhhHHHHHHhc---CCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCc
Q 020219 135 LRSLLLSLPLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQ 211 (329)
Q Consensus 135 v~~lL~~L~~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
....+...|.+..++||.+..+.......+ +...+|+.++.....+.+
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~f----------------------------- 256 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGF----------------------------- 256 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCcc-----------------------------
Confidence 344455566778899988777666555543 567889998877644431
Q ss_pred ccccccccCCCCCccccCCCCCCC-------CCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchH-HHHHcCceEEEEcC
Q 020219 212 IFDIIGHFAQPNPSLVALPKTPIA-------CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQ-AGKRVGLDTVLIGK 282 (329)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~-------~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~-~a~~~G~~~v~v~~ 282 (329)
|.-...+-+++|..-. .+.+++ +++++.....+.+.++....+++++||+. .|+- .-+.-|+.++++..
T Consensus 257 -f~e~~vlreV~t~~g~-l~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 257 -FHEGTVLREVEPQEGL-LKNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred -ccccceeeeecccccc-ccccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 1111111222222211 111111 44566777788888888889999999999 4654 45667888888754
Q ss_pred C
Q 020219 283 S 283 (329)
Q Consensus 283 ~ 283 (329)
.
T Consensus 335 e 335 (424)
T KOG2469|consen 335 E 335 (424)
T ss_pred h
Confidence 4
No 193
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.02 E-value=0.12 Score=52.49 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=71.4
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
-.+.|++.+.++.| +++.+++|+.....+....+.+|+ ++
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~------------------------------ 388 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA------------------------------ 388 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee------------------------------
Confidence 35578888877766 577899999999999999999886 11
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCC
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR 285 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~ 285 (329)
.-.|+-...+.+++.-....+.++||+.||..+.+.++...++. .
T Consensus 389 -------------------------------~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a 433 (499)
T TIGR01494 389 -------------------------------RVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----A 433 (499)
T ss_pred -------------------------------ccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----h
Confidence 11123334444444434477999999999999999998765553 4
Q ss_pred CCCCCEEeCC--HhHHHHHH
Q 020219 286 VKGADYAFES--IHNIKEAI 303 (329)
Q Consensus 286 ~~~ad~i~~~--l~el~~~l 303 (329)
...+|.++.+ +..+..++
T Consensus 434 ~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 434 KAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred HHhCCeEEecCCHHHHHHHH
Confidence 5668887765 44444443
No 194
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=94.70 E-value=0.98 Score=43.13 Aligned_cols=49 Identities=14% Similarity=0.283 Sum_probs=36.3
Q ss_pred CCCCcHHHHHHHHHHc--------C-CCCCcEEEEeCCh-hchHHHH---------------HcCceEEEEcCC
Q 020219 235 ACKPSELAIEKALKIA--------S-INPQRTLFFEDSV-RNIQAGK---------------RVGLDTVLIGKS 283 (329)
Q Consensus 235 ~~Kp~~~~~~~~l~~~--------~-v~~~e~l~VGDs~-~Di~~a~---------------~~G~~~v~v~~~ 283 (329)
.|||.+-.|.++.+.+ + -++...++|||++ +|+..|. +-|+.+|++.+|
T Consensus 269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 3899886666554322 2 3567899999999 7999996 568888998766
No 195
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.66 E-value=0.27 Score=46.12 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=33.3
Q ss_pred HHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeec
Q 020219 139 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE 177 (329)
Q Consensus 139 L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~ 177 (329)
|++.+..+++=|-|+.+++...++++++.++||.+++..
T Consensus 154 Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 154 LKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred HHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCC
Confidence 444455677889999999999999999999999999876
No 196
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.58 E-value=0.07 Score=52.92 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=76.3
Q ss_pred HHHHHHhccCCCCCCCCChhH--HHHHHhC---CCcEEEEeCC--ChhhHHHHHHhcCCccccceeeeeccCCCCCCCCC
Q 020219 115 DYHSFVHGRLPYENLKPDPVL--RSLLLSL---PLRKIIFTNA--DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV 187 (329)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~pgv--~~lL~~L---~~~~~ivT~~--~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 187 (329)
.+.+...-.+..++..++|.. .++.+.+ +.|++++|+. +....+..|...|.+..---++.+...-.
T Consensus 82 ~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl------ 155 (635)
T COG5610 82 SFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL------ 155 (635)
T ss_pred HHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh------
Confidence 344433333323444444443 3445544 4789999985 56667888888886532222343332211
Q ss_pred CCChhhHHHHHhhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hc
Q 020219 188 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RN 266 (329)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~D 266 (329)
.|.+...|..+++.-+++|...+++||+. .|
T Consensus 156 ------------------------------------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD 187 (635)
T COG5610 156 ------------------------------------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVAD 187 (635)
T ss_pred ------------------------------------------------hcccchHHHHHHhhcCCChhheEEecCchhhh
Confidence 57888999999999999999999999999 69
Q ss_pred hHHHHHcCceEEEE
Q 020219 267 IQAGKRVGLDTVLI 280 (329)
Q Consensus 267 i~~a~~~G~~~v~v 280 (329)
+.++++.|+.+.+.
T Consensus 188 ~l~pk~LgI~Tlf~ 201 (635)
T COG5610 188 YLKPKNLGISTLFY 201 (635)
T ss_pred hcCccccchhHHHH
Confidence 99999999987664
No 197
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=94.50 E-value=1.1 Score=41.79 Aligned_cols=65 Identities=15% Similarity=0.176 Sum_probs=43.0
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcC---ceEEEEcCCCCCCCCCEEeCCHhHHHHHH
Q 020219 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG---LDTVLIGKSQRVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G---~~~v~v~~~~~~~~ad~i~~~l~el~~~l 303 (329)
..|..++.+++++...+..-+++.||...|-.+...+. -.++.+..+ ...+++-..........+
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~--~t~a~~~~~~~~~~~~~l 248 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG--STQAKFRLAGVYGFLRSL 248 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC--cccccccccccHHHHHHH
Confidence 45778899999988887777999999999988888775 445555444 333333333333333333
No 198
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=93.87 E-value=0.16 Score=42.86 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=69.7
Q ss_pred CCCCCChhHHHHHHhC--CCcEEEEeCCC------hhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHH
Q 020219 127 ENLKPDPVLRSLLLSL--PLRKIIFTNAD------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 198 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L--~~~~~ivT~~~------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
+++.+.|++.+.+++| .+.++++|... ....+++.+.+.+-++-..++|+.
T Consensus 65 RnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn--------------------- 123 (180)
T COG4502 65 RNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN--------------------- 123 (180)
T ss_pred hhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC---------------------
Confidence 5677889999999998 58889998762 223455566666666666777753
Q ss_pred hhhccccCCCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEE
Q 020219 199 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV 278 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v 278 (329)
|. + +.. =++|+|++..++..+ |.++.
T Consensus 124 --------------------------------------Kn---i---------vka--DilIDDnp~nLE~F~--G~kIl 149 (180)
T COG4502 124 --------------------------------------KN---I---------VKA--DILIDDNPLNLENFK--GNKIL 149 (180)
T ss_pred --------------------------------------CC---e---------EEe--eEEecCCchhhhhcc--CceEE
Confidence 21 0 111 278999999998776 44555
Q ss_pred EEcCCCCCCCCCEEeCCHhHHHHHHHH
Q 020219 279 LIGKSQRVKGADYAFESIHNIKEAIPE 305 (329)
Q Consensus 279 ~v~~~~~~~~ad~i~~~l~el~~~l~~ 305 (329)
+-+.-.........+.+|.|+.+.+-+
T Consensus 150 FdA~HN~nenRF~Rv~~W~e~eq~ll~ 176 (180)
T COG4502 150 FDAHHNKNENRFVRVRDWYEAEQALLE 176 (180)
T ss_pred EecccccCccceeeeccHHHHHHHHHH
Confidence 544444555666778999998866543
No 199
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=93.86 E-value=0.9 Score=47.58 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCc--eEEEEcCCCCCCCCCEEeCCHhHHHHHH
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL--DTVLIGKSQRVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~--~~v~v~~~~~~~~ad~i~~~l~el~~~l 303 (329)
++.+.+.++-| .++.+|||+.||+.|.+.+.. .+++-.-.+..=.||+-+..+..+...|
T Consensus 771 ~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 771 QVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence 44444444444 689999999999999887654 3333323334557888888887776664
No 200
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.71 E-value=0.39 Score=48.16 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=35.6
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCc
Q 020219 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 275 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~ 275 (329)
-|+.+-++++++++++..+-.+|++|++..-+.-++-+-
T Consensus 310 ~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 310 DPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 688899999999999999999999999988888888774
No 201
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=93.18 E-value=0.58 Score=45.48 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcC
Q 020219 239 SELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 239 ~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~ 282 (329)
|...|+++.+++|- +-.-++|||+.-.-.+|++..|++.-+..
T Consensus 410 KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 410 KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 36899999999997 57788899999999999999999887654
No 202
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.17 E-value=0.26 Score=55.19 Aligned_cols=48 Identities=19% Similarity=0.271 Sum_probs=38.0
Q ss_pred CcEEEEeCChhchHHHHHcCceEEEE-cCC--CCCCCCCEEeCCHhHHHHHH
Q 020219 255 QRTLFFEDSVRNIQAGKRVGLDTVLI-GKS--QRVKGADYAFESIHNIKEAI 303 (329)
Q Consensus 255 ~e~l~VGDs~~Di~~a~~~G~~~v~v-~~~--~~~~~ad~i~~~l~el~~~l 303 (329)
.-+++|||+.||+.|.++|.+.+ ++ +.. +....+|+.+..+..|...|
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHH
Confidence 45899999999999999996654 33 222 25779999999999887775
No 203
>PLN03017 trehalose-phosphatase
Probab=92.85 E-value=0.5 Score=46.18 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=56.7
Q ss_pred CCcHHHHHHHHHHcCCCC---CcEEEEeCChhchHHHHHcC----ceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 237 KPSELAIEKALKIASINP---QRTLFFEDSVRNIQAGKRVG----LDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~~---~e~l~VGDs~~Di~~a~~~G----~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
-.|..+++.+++.++... .-.+||||..+|-.+.+.+. --.|.|........|.|.+.+..++.++|.++..
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 356789999999998753 35899999999988887662 2356666444567899999999999999988755
No 204
>PLN02151 trehalose-phosphatase
Probab=92.61 E-value=0.53 Score=45.78 Aligned_cols=71 Identities=18% Similarity=0.166 Sum_probs=55.1
Q ss_pred CcHHHHHHHHHHcCCCCC---cEEEEeCChhchHHHHHcC----ceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 238 PSELAIEKALKIASINPQ---RTLFFEDSVRNIQAGKRVG----LDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 238 p~~~~~~~~l~~~~v~~~---e~l~VGDs~~Di~~a~~~G----~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
.|..+++.+++.++.... -.+||||..+|-.+.+.+. --.+.|..+.....|.|.+.+..++.++|..+..
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 567899999999886532 2899999999988887652 1245565545667899999999999999987654
No 205
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=91.83 E-value=0.21 Score=41.34 Aligned_cols=16 Identities=31% Similarity=0.428 Sum_probs=13.6
Q ss_pred ccEEEEeCCCCcccCc
Q 020219 45 YDCLLFDLDDTLYPYS 60 (329)
Q Consensus 45 ~k~viFDlDGTL~d~~ 60 (329)
+|+|+||+||||++..
T Consensus 1 ~K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 1 MKRLVMDLDNTITLTE 16 (126)
T ss_pred CCEEEEeCCCCcccCC
Confidence 3799999999999753
No 206
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.05 E-value=1.1 Score=38.59 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=17.8
Q ss_pred EEEEeCChhchHHHHHcCce
Q 020219 257 TLFFEDSVRNIQAGKRVGLD 276 (329)
Q Consensus 257 ~l~VGDs~~Di~~a~~~G~~ 276 (329)
...+|.+.+|+.+-+++|++
T Consensus 122 ~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 122 YAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred EEecCCcHHHHHHHHHcCCC
Confidence 44599999999999999987
No 207
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=90.49 E-value=1.3 Score=41.38 Aligned_cols=47 Identities=21% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---hhHHHHHHhcCCccccceeeee
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADK---VHAVKVLSRLGLEDCFEGIICF 176 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~---~~~~~~l~~~gl~~~f~~i~~~ 176 (329)
.++||+.++|+.| +.+++++||++. ......++++|+....+.++++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts 70 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS 70 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH
Confidence 4568888888776 477899999653 3334567888987555666654
No 208
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=90.38 E-value=1.2 Score=40.95 Aligned_cols=45 Identities=11% Similarity=-0.067 Sum_probs=40.4
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCC
Q 020219 239 SELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 239 ~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~ 283 (329)
|...|+.+.+++|-+...-++|||+..--++|+..+++++-+...
T Consensus 215 K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 215 KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence 368999999999998889999999999999999999999887543
No 209
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=90.13 E-value=1.8 Score=40.01 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=36.3
Q ss_pred CCHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCC
Q 020219 111 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGL 166 (329)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl 166 (329)
+..+.+.+.+.. ..+.+++|+.++++.| .+++.|+|.+-...+..++++.|.
T Consensus 75 l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~ 129 (246)
T PF05822_consen 75 LTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV 129 (246)
T ss_dssp -BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred cCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence 445667666665 4688889999998877 588999999999999999999865
No 210
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=89.06 E-value=0.36 Score=42.43 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=20.6
Q ss_pred EEEEeCCCCcccCc-ccHHHHHHHHHHH
Q 020219 47 CLLFDLDDTLYPYS-SGIAAACGQNIKD 73 (329)
Q Consensus 47 ~viFDlDGTL~d~~-~~~~~~~~~~~~~ 73 (329)
+++||+||||++.. ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999865 5566666666666
No 211
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=88.36 E-value=3.9 Score=45.28 Aligned_cols=57 Identities=14% Similarity=0.107 Sum_probs=41.5
Q ss_pred cCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcE-EEEeCChh-chHHHHHcCceEEE
Q 020219 219 FAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRT-LFFEDSVR-NIQAGKRVGLDTVL 279 (329)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~-l~VGDs~~-Di~~a~~~G~~~v~ 279 (329)
|++..-..+.+|. +-.+..+++++..++|++.+++ +|+||+.| |++....--.++|.
T Consensus 941 ys~~~~~LDVlP~----~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi 999 (1050)
T TIGR02468 941 YCRNGTRLNVIPL----LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVI 999 (1050)
T ss_pred eecCCcEeeeeeC----CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEE
Confidence 3344445555565 3678899999999999999999 55999999 98876443333433
No 212
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=87.84 E-value=2.5 Score=39.56 Aligned_cols=51 Identities=20% Similarity=0.113 Sum_probs=36.7
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChhh---HHHHHHh-cCCccccceeeeec
Q 020219 127 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSR-LGLEDCFEGIICFE 177 (329)
Q Consensus 127 ~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~---~~~~l~~-~gl~~~f~~i~~~~ 177 (329)
....++||+.++|+.| +.+++++||++... ....|.. .+++...+.++++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 3467789999999876 58899999976443 4455565 56666778888764
No 213
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=87.33 E-value=2.6 Score=39.18 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=27.6
Q ss_pred HHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCC
Q 020219 246 ALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR 285 (329)
Q Consensus 246 ~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~ 285 (329)
+|+.++-. +||+|....++.|. .+++++.|+++-.
T Consensus 228 vL~~~~ph----IFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 228 VLKAFRPH----IFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred HHHhhCCC----EeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 45555543 99999999999998 7888999988743
No 214
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=86.21 E-value=0.68 Score=39.64 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=30.2
Q ss_pred CCCCcEEEEeCCh-hchHHHHHcCceEEEEcCCC
Q 020219 252 INPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ 284 (329)
Q Consensus 252 v~~~e~l~VGDs~-~Di~~a~~~G~~~v~v~~~~ 284 (329)
.+++|++||||.+ .||-+|...|.-.+|..++-
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 5889999999999 89999999999999987764
No 215
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=85.94 E-value=0.81 Score=42.59 Aligned_cols=28 Identities=25% Similarity=0.230 Sum_probs=20.7
Q ss_pred cEEEEeCCCCcccC-----cccHHHHHHHHHHH
Q 020219 46 DCLLFDLDDTLYPY-----SSGIAAACGQNIKD 73 (329)
Q Consensus 46 k~viFDlDGTL~d~-----~~~~~~~~~~~~~~ 73 (329)
.+|+||+||||++. ...+.....+.+..
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~ 47 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQL 47 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 68999999999984 44555666666665
No 216
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=85.12 E-value=1 Score=45.73 Aligned_cols=86 Identities=12% Similarity=0.215 Sum_probs=64.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
.+-||+++-+.+| +++.+.+|+.+.-.+..+.++.|++++.. +
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA-----e----------------------------- 492 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA-----E----------------------------- 492 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh-----c-----------------------------
Confidence 4458888877665 69999999999999999999999864211 0
Q ss_pred CCCCcccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEE
Q 020219 207 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
+|| +-...++++.+-...=+.|.||+.||-.+...+....+|-
T Consensus 493 -----------------------------atP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 493 -----------------------------ATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred -----------------------------CCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 344 4455666667766677899999999999988887665554
No 217
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=83.86 E-value=2.4 Score=41.08 Aligned_cols=115 Identities=20% Similarity=0.192 Sum_probs=68.5
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhc---CCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccC
Q 020219 133 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 206 (329)
Q Consensus 133 pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (329)
|....+|+.| |.+++++||.+..++..-++.+ .+.+.||.++.-.+.+.+
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~F------------------------ 298 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEF------------------------ 298 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcc------------------------
Confidence 4555566555 5779999999888876655543 235678888765544331
Q ss_pred CCCCcccc--cccccCCCCCccc-------cCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCh-hchHHHH-HcCc
Q 020219 207 ANGPQIFD--IIGHFAQPNPSLV-------ALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGK-RVGL 275 (329)
Q Consensus 207 ~~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~-~Di~~a~-~~G~ 275 (329)
|- =+||=+-++-+.. .+.|+-+.- ...+...++.-|-...+++++||.+ +|+.... +.||
T Consensus 299 ------ftde~rPfR~~dek~~sl~wdkv~klekgkiYy---~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgW 369 (510)
T KOG2470|consen 299 ------FTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYY---QGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGW 369 (510)
T ss_pred ------cccccCcchhhcccccchhhhhhhhcccCceee---eccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhccc
Confidence 10 0111111111111 112211111 1235567777788888999999999 7988776 8999
Q ss_pred eEEEE
Q 020219 276 DTVLI 280 (329)
Q Consensus 276 ~~v~v 280 (329)
.+..+
T Consensus 370 RTgAI 374 (510)
T KOG2470|consen 370 RTGAI 374 (510)
T ss_pred ccccc
Confidence 87665
No 218
>PLN02580 trehalose-phosphatase
Probab=79.83 E-value=4 Score=40.25 Aligned_cols=33 Identities=9% Similarity=0.187 Sum_probs=22.8
Q ss_pred CChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHh
Q 020219 131 PDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSR 163 (329)
Q Consensus 131 ~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~ 163 (329)
+.|++.+.|+.|. .+++|+|+.+...+..++.-
T Consensus 142 ~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 142 MSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 3456666666662 56889999888877766643
No 219
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=78.80 E-value=2.9 Score=37.88 Aligned_cols=61 Identities=15% Similarity=0.203 Sum_probs=31.3
Q ss_pred CCCcHHHHHHHHHHcCCC---CCcEEEEeCChhchHHHHHcCce-----EEEEcCCC---CCCCCCEEeCCH
Q 020219 236 CKPSELAIEKALKIASIN---PQRTLFFEDSVRNIQAGKRVGLD-----TVLIGKSQ---RVKGADYAFESI 296 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~---~~e~l~VGDs~~Di~~a~~~G~~-----~v~v~~~~---~~~~ad~i~~~l 296 (329)
+..|..+++.++++++.. +.-++|+||..+|-.|.+.+.-. .+.+.... ....|.|-+.|.
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 345789999999999876 78899999999999998886542 45554433 456666666553
No 220
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.61 E-value=7.5 Score=36.12 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCC
Q 020219 109 YDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGL 166 (329)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl 166 (329)
..++...+.+.+.. ..+.+..|+.++++.| .++..+.|.+-...++.++++...
T Consensus 121 ~~f~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~ 177 (298)
T KOG3128|consen 121 GGFSKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLV 177 (298)
T ss_pred CCcCHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhc
Confidence 44556666666654 3455567777766655 588999999988888887766543
No 221
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=75.90 E-value=6.2 Score=44.09 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=27.5
Q ss_pred hhHHHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccc
Q 020219 133 PVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDC 169 (329)
Q Consensus 133 pgv~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~ 169 (329)
|+..+.|.+.+++++++|+.-.+.+..+.-..++-..
T Consensus 657 PetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~ 693 (1151)
T KOG0206|consen 657 PETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQ 693 (1151)
T ss_pred hHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCC
Confidence 5555666677899999999888877777766666443
No 222
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=73.21 E-value=18 Score=33.06 Aligned_cols=47 Identities=13% Similarity=0.224 Sum_probs=35.7
Q ss_pred CChhHHHHHHhC---CCcEEEEeC---CChhhHHHHHHhcCCccccceeeeec
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTN---ADKVHAVKVLSRLGLEDCFEGIICFE 177 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~---~~~~~~~~~l~~~gl~~~f~~i~~~~ 177 (329)
+.|++.++|++| +.+++++|| .+.......++.+|++...+.++++.
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 456788887766 578899997 34666777888899987777888764
No 223
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=71.30 E-value=15 Score=39.63 Aligned_cols=136 Identities=12% Similarity=0.037 Sum_probs=78.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhcccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 205 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (329)
-+.+||+++.++.+ ++.+=.+|+.+-..++.+..+.|+-..=+...+-+...+ + ++++ +...+....+.+-
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r--~~s~-ee~~~i~pkl~Vl-- 719 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-R--ELSQ-EERDKIWPKLRVL-- 719 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-h--hcCH-HHHHhhhhhheee--
Confidence 34578888888766 577789999999999999999998543221222221111 0 0000 0001111111000
Q ss_pred CCCCCcccccccccCCCCCccccCCCCCCCCCCcH---HHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcC
Q 020219 206 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSE---LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 282 (329)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~---~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~ 282 (329)
...+| ..+-+.+++.| +=+.+-||+.||-.+.++|.+..+|--.
T Consensus 720 ------------------------------ARSSP~DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIa 766 (1034)
T KOG0204|consen 720 ------------------------------ARSSPNDKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIA 766 (1034)
T ss_pred ------------------------------ecCCCchHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhcccc
Confidence 11111 33334444333 3366789999999999999888776533
Q ss_pred C--CCCCCCCEEeCC--HhHHHHHH
Q 020219 283 S--QRVKGADYAFES--IHNIKEAI 303 (329)
Q Consensus 283 ~--~~~~~ad~i~~~--l~el~~~l 303 (329)
| -.+..+|+|+-| +..+..++
T Consensus 767 GTeVAKEaSDIIi~DDNFssIVk~v 791 (1034)
T KOG0204|consen 767 GTEVAKEASDIIILDDNFSSIVKAV 791 (1034)
T ss_pred chhhhhhhCCeEEEcCchHHHHHHH
Confidence 3 357888887754 66666553
No 224
>PRK10444 UMP phosphatase; Provisional
Probab=70.02 E-value=21 Score=32.84 Aligned_cols=47 Identities=13% Similarity=0.059 Sum_probs=33.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhh---HHHHHHhcCCccccceeeee
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCFEGIICF 176 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~---~~~~l~~~gl~~~f~~i~~~ 176 (329)
.+.|++.++++.| +.+.+++||..... ....++++|++-.-+.++++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 6689999998776 57799999976643 45556667886555666654
No 225
>PLN03017 trehalose-phosphatase
Probab=69.74 E-value=4.7 Score=39.49 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=19.5
Q ss_pred ccEEEEeCCCCccc----Ccc-cHHHHHHHHHHH
Q 020219 45 YDCLLFDLDDTLYP----YSS-GIAAACGQNIKD 73 (329)
Q Consensus 45 ~k~viFDlDGTL~d----~~~-~~~~~~~~~~~~ 73 (329)
-.++++|+||||++ ... .+.....+++.+
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 36788899999992 222 455666666665
No 226
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=65.65 E-value=3.6 Score=37.50 Aligned_cols=13 Identities=38% Similarity=0.636 Sum_probs=12.0
Q ss_pred cEEEEeCCCCccc
Q 020219 46 DCLLFDLDDTLYP 58 (329)
Q Consensus 46 k~viFDlDGTL~d 58 (329)
.+++||+||||++
T Consensus 4 ~~l~lD~DGTL~~ 16 (244)
T TIGR00685 4 RAFFFDYDGTLSE 16 (244)
T ss_pred EEEEEecCccccC
Confidence 6899999999997
No 227
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=63.44 E-value=85 Score=30.02 Aligned_cols=110 Identities=11% Similarity=0.104 Sum_probs=60.7
Q ss_pred HHHHhCCCcEEEEeCCC-----hhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCCc
Q 020219 137 SLLLSLPLRKIIFTNAD-----KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQ 211 (329)
Q Consensus 137 ~lL~~L~~~~~ivT~~~-----~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
-...+||.+.+.++.+. .+.+....+-++ .++|.|..-...+ ..++.+..-+.+|+......
T Consensus 64 va~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLs--r~~D~I~~R~~~~-----------~~ve~lA~~s~VPViNgLtD 130 (310)
T COG0078 64 VAATQLGGHAIYLGPGDSQLGRGESIKDTARVLS--RMVDAIMIRGFSH-----------ETLEELAKYSGVPVINGLTD 130 (310)
T ss_pred HHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHH--hhhheEEEecccH-----------HHHHHHHHhCCCceEccccc
Confidence 33456666656555432 233333333322 4567665443222 34555566666666554333
Q ss_pred ccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC-CCCCcEEEEeCChh----chHHHHHcCceEEEE
Q 020219 212 IFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS-INPQRTLFFEDSVR----NIQAGKRVGLDTVLI 280 (329)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~-v~~~e~l~VGDs~~----Di~~a~~~G~~~v~v 280 (329)
.+ |||+-. .=+..+.+++| +..-.++||||+-| =+.++...|+....+
T Consensus 131 ~~-------HP~Q~L--------------ADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia 183 (310)
T COG0078 131 EF-------HPCQAL--------------ADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIA 183 (310)
T ss_pred cc-------CcHHHH--------------HHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEE
Confidence 32 222222 22556667777 78889999999942 155677889986554
No 228
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=63.31 E-value=22 Score=32.72 Aligned_cols=47 Identities=19% Similarity=0.230 Sum_probs=33.6
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChh---hHHHHHHhcCCccccceeeeec
Q 020219 131 PDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLEDCFEGIICFE 177 (329)
Q Consensus 131 ~~pgv~~lL~~L---~~~~~ivT~~~~~---~~~~~l~~~gl~~~f~~i~~~~ 177 (329)
+.|++.+.|+.| +.+++++||.+.. .....++.+|++-..+.++++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH
Confidence 456777777665 5889999986554 4667788889875567777653
No 229
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=62.65 E-value=63 Score=34.27 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEc-CCCCCCCCCEEeCC
Q 020219 239 SELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG-KSQRVKGADYAFES 295 (329)
Q Consensus 239 ~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~-~~~~~~~ad~i~~~ 295 (329)
.|+.-..+.++++-....|-+.||+.||..+.+++.+.++..+ +......+|.++..
T Consensus 569 fpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVlte 626 (942)
T KOG0205|consen 569 FPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (942)
T ss_pred CHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcC
Confidence 3556667777787777789999999999999999987766554 33456677777765
No 230
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=62.42 E-value=6.3 Score=42.02 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=20.0
Q ss_pred CccEEEEeCCCCcccCc-----ccHHHHHHHHHHH
Q 020219 44 KYDCLLFDLDDTLYPYS-----SGIAAACGQNIKD 73 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~-----~~~~~~~~~~~~~ 73 (329)
+.++++||+||||++.. ....+...+++.+
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~ 525 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRR 525 (726)
T ss_pred cceEEEEecCccccCCCCCcccCCCCHHHHHHHHH
Confidence 45899999999999732 1233455555554
No 231
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=61.77 E-value=47 Score=30.04 Aligned_cols=49 Identities=27% Similarity=0.239 Sum_probs=34.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCC---hhhHHHHHHh-cCCccccceeeeec
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNAD---KVHAVKVLSR-LGLEDCFEGIICFE 177 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~---~~~~~~~l~~-~gl~~~f~~i~~~~ 177 (329)
-.++|++.+.|+.+ +.++.++||+. .......+.+ +|+.-..+.++++.
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 44578999999877 57889999754 3444455666 78776677777653
No 232
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=60.34 E-value=14 Score=39.97 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=54.5
Q ss_pred CCCcHHHHHHHHHHc------CCCCCcEEEEeCCh-hchHHHHHcCceE------------------------------E
Q 020219 236 CKPSELAIEKALKIA------SINPQRTLFFEDSV-RNIQAGKRVGLDT------------------------------V 278 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~------~v~~~e~l~VGDs~-~Di~~a~~~G~~~------------------------------v 278 (329)
+-.|..+++.+++++ +-.++=++++||.. .|=.|.+..+-.. +
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 347789999999976 33567799999976 4877777654211 2
Q ss_pred EEcCCCCCCCCCEEeCCHhHHHHHHHHHHhc
Q 020219 279 LIGKSQRVKGADYAFESIHNIKEAIPELWES 309 (329)
Q Consensus 279 ~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~ 309 (329)
.+.-|.....|.|-+++..|+.+.|..+...
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~ 786 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAVA 786 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhcc
Confidence 2333456889999999999999999887653
No 233
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=59.60 E-value=9.8 Score=41.80 Aligned_cols=36 Identities=14% Similarity=0.272 Sum_probs=26.6
Q ss_pred CCChhHHHHHHhC----CCcEEEEeCCChhhHHHHHHhcC
Q 020219 130 KPDPVLRSLLLSL----PLRKIIFTNADKVHAVKVLSRLG 165 (329)
Q Consensus 130 ~~~pgv~~lL~~L----~~~~~ivT~~~~~~~~~~l~~~g 165 (329)
.+.|++.++|+.| +..++|+|+.+...+..++...+
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 4456777777766 46689999998888888876543
No 234
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=58.82 E-value=16 Score=39.44 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=31.1
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChhhHHHHHHhcCCc
Q 020219 128 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE 167 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~---~~~~ivT~~~~~~~~~~l~~~gl~ 167 (329)
..++-|+.++.+++|. .+++.+|+.+.-.+.++.+.+|+-
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 3455688888888884 778899998888888888887763
No 235
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=58.04 E-value=5.3 Score=28.87 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=16.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCChhchHHHH
Q 020219 243 IEKALKIASINPQRTLFFEDSVRNIQAGK 271 (329)
Q Consensus 243 ~~~~l~~~~v~~~e~l~VGDs~~Di~~a~ 271 (329)
.+.+|+++|+ .+++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5688999998 799999999999865
No 236
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=55.32 E-value=11 Score=41.04 Aligned_cols=17 Identities=35% Similarity=0.589 Sum_probs=14.4
Q ss_pred CccEEEEeCCCCcccCc
Q 020219 44 KYDCLLFDLDDTLYPYS 60 (329)
Q Consensus 44 ~~k~viFDlDGTL~d~~ 60 (329)
+.++|++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 45899999999999754
No 237
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=54.88 E-value=42 Score=36.43 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=29.4
Q ss_pred EEEEeCChhchHHHHHcCceEEE-EcCCC-CCCCCCEEeC
Q 020219 257 TLFFEDSVRNIQAGKRVGLDTVL-IGKSQ-RVKGADYAFE 294 (329)
Q Consensus 257 ~l~VGDs~~Di~~a~~~G~~~v~-v~~~~-~~~~ad~i~~ 294 (329)
+.+.||+.||-.+.|++.+..++ +.-+. .+..||.|+=
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILL 747 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILL 747 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEe
Confidence 56689999999999999998888 33333 4777887653
No 238
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=54.65 E-value=12 Score=33.68 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=25.6
Q ss_pred cEEEEeCCCCcccCcccHHHHHHHHHHHHHHHHh
Q 020219 46 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKL 79 (329)
Q Consensus 46 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~ 79 (329)
-++.||+||||......+...+.+.+.+ +.+..
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~-lr~~v 44 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK-LRKKV 44 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH-Hhhhe
Confidence 4789999999999888777777776666 55543
No 239
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=54.47 E-value=8.2 Score=33.01 Aligned_cols=16 Identities=38% Similarity=0.522 Sum_probs=13.6
Q ss_pred cEEEEeCCCCcccCcc
Q 020219 46 DCLLFDLDDTLYPYSS 61 (329)
Q Consensus 46 k~viFDlDGTL~d~~~ 61 (329)
+++++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5799999999998654
No 240
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=54.08 E-value=8.6 Score=32.18 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=13.6
Q ss_pred cEEEEeCCCCcccCcc
Q 020219 46 DCLLFDLDDTLYPYSS 61 (329)
Q Consensus 46 k~viFDlDGTL~d~~~ 61 (329)
+.+++|+||||++...
T Consensus 3 ~~lvldld~tl~~~~~ 18 (148)
T smart00577 3 KTLVLDLDETLVHSTH 18 (148)
T ss_pred cEEEEeCCCCeECCCC
Confidence 5799999999998643
No 241
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=53.08 E-value=56 Score=35.42 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=28.2
Q ss_pred CCChhHHHHHHhC----CCcEEEEeCCChhhHHHHHHhc
Q 020219 130 KPDPVLRSLLLSL----PLRKIIFTNADKVHAVKVLSRL 164 (329)
Q Consensus 130 ~~~pgv~~lL~~L----~~~~~ivT~~~~~~~~~~l~~~ 164 (329)
.+.|++.++|+.| +..++|+|+.+...+..++...
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4667888889888 4669999999999888888643
No 242
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=51.72 E-value=35 Score=31.04 Aligned_cols=41 Identities=15% Similarity=0.108 Sum_probs=31.9
Q ss_pred CCcEEEEeCCh----hchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHH
Q 020219 254 PQRTLFFEDSV----RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 254 ~~e~l~VGDs~----~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
.++++||||.. ||.+.....+....- +.+++|-.+.|.+++
T Consensus 175 ~~~I~FfGDkt~pGGNDyei~~~~rt~g~~-------------V~~p~DT~~~l~~l~ 219 (220)
T PF03332_consen 175 FDEIHFFGDKTFPGGNDYEIFEDPRTIGHT-------------VTSPEDTIKQLKELF 219 (220)
T ss_dssp -SEEEEEESS-STTSTTHHHHHSTTSEEEE--------------SSHHHHHHHHHHHH
T ss_pred cceEEEEehhccCCCCCceeeecCCccEEE-------------eCCHHHHHHHHHHHh
Confidence 68999999988 999998887765544 788888888888775
No 243
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=51.65 E-value=1.1e+02 Score=30.42 Aligned_cols=56 Identities=16% Similarity=0.271 Sum_probs=35.9
Q ss_pred EEEEeCChhchHHHHHcCceEEEEcCCCCCCCCCEEeCC-------HhHHHHHHHHHHhccCcC
Q 020219 257 TLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFES-------IHNIKEAIPELWESDMKS 313 (329)
Q Consensus 257 ~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~-------l~el~~~l~~~~~~~~~~ 313 (329)
-.||.|+- |++.+.+-=+...+.+.|+..-.+||++.+ ++++...|++..+.+.+.
T Consensus 216 P~~vd~~~-d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~e 278 (477)
T KOG2456|consen 216 PCYVDKNC-DLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKE 278 (477)
T ss_pred CeeecCCc-CHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccc
Confidence 36676666 766654432334558899999999999988 344555555555544433
No 244
>PLN02382 probable sucrose-phosphatase
Probab=48.14 E-value=18 Score=35.92 Aligned_cols=14 Identities=29% Similarity=0.287 Sum_probs=11.8
Q ss_pred cEEEEeCCCCcccC
Q 020219 46 DCLLFDLDDTLYPY 59 (329)
Q Consensus 46 k~viFDlDGTL~d~ 59 (329)
-+|+.||||||++.
T Consensus 10 ~lI~sDLDGTLL~~ 23 (413)
T PLN02382 10 LMIVSDLDHTMVDH 23 (413)
T ss_pred EEEEEcCCCcCcCC
Confidence 46777999999985
No 245
>PLN02151 trehalose-phosphatase
Probab=48.02 E-value=15 Score=35.87 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=18.5
Q ss_pred ccEEEEeCCCCcccC----cc-cHHHHHHHHHHH
Q 020219 45 YDCLLFDLDDTLYPY----SS-GIAAACGQNIKD 73 (329)
Q Consensus 45 ~k~viFDlDGTL~d~----~~-~~~~~~~~~~~~ 73 (329)
-.++++|+||||.+. .. .......+++..
T Consensus 98 ~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~ 131 (354)
T PLN02151 98 QIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRK 131 (354)
T ss_pred ceEEEEecCccCCCCCCCcccccCCHHHHHHHHH
Confidence 367888999999942 22 344555555554
No 246
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ....
Probab=47.40 E-value=1.7e+02 Score=26.10 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=52.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceE-EEEcCCCCCCCCCEEeCCHhHHHHHHHHHHhcc
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT-VLIGKSQRVKGADYAFESIHNIKEAIPELWESD 310 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~-v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~~ 310 (329)
..-..++++++++-.+...+.|-..=.+-.++.+.+. |.-+.+...-+--.|+.+.++..+.+.+++...
T Consensus 4 ~faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~~ViKadGla~GKGV~i~~~~~eA~~~l~~~~~~~ 74 (194)
T PF01071_consen 4 SFAKEFMKRYGIPTAKYKVFTDYEEALEYLEEQGYPYVVIKADGLAAGKGVVIADDREEALEALREIFVDR 74 (194)
T ss_dssp HHHHHHHHHTT-SB--EEEESSHHHHHHHHHHHSSSEEEEEESSSCTTTSEEEESSHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHcCCCCCCeeEECCHHHHHHHHHhcCCCceEEccCCCCCCCEEEEeCCHHHHHHHHHHhcccc
Confidence 4567889999999888888876444556677778887 555677777677889999999999999999743
No 247
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A.
Probab=46.07 E-value=1.6e+02 Score=24.42 Aligned_cols=69 Identities=16% Similarity=0.252 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhchHH-HHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHhcc
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNIQA-GKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESD 310 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di~~-a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~~ 310 (329)
..+..++++.|++--+...+.+. .++.. +...|.+.+.-+.........+++.+.+++.+.+.++....
T Consensus 6 ~~~~~~~~~~gv~~P~~~~~~~~-~~~~~~~~~~~~p~vvKp~~g~gs~gv~~~~~~~~l~~~~~~~~~~~ 75 (184)
T PF13535_consen 6 YRMRELLKKAGVPVPKTRIVDSE-EELRAFAEDLGFPFVVKPVDGSGSRGVFIVHSPEELEAALAEIREDS 75 (184)
T ss_dssp HHHHHHHHHHTS----EEEECSH-HHHHHHHHHSSSSEEEEESS-STTTT-EEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCCCEEEECCH-HHHHHHHHHcCCCEEEEcCccccCCCEEEeCCHHHHHHHHHHHHHhc
Confidence 56778888999976566766654 45444 57778888887776666778889999999999988887654
No 248
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=46.02 E-value=72 Score=30.85 Aligned_cols=83 Identities=22% Similarity=0.245 Sum_probs=63.0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCChhc-hHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHhccCcCccccC
Q 020219 240 ELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYP 318 (329)
Q Consensus 240 ~~~~~~~l~~~~v~~~e~l~VGDs~~D-i~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~~~~~~~~~~ 318 (329)
..+-+.+.+++|++-+ -+.|-|+..+ .+++.+.|++++.-+--...-+-..++.+.+++.++ |+......-|..
T Consensus 115 egiRrlAAeeLglpTs-~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsvv~~~e~ve~A----W~~A~~g~R~~~ 189 (394)
T COG0027 115 EGIRRLAAEELGLPTS-KYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQSVVRSPEDVEKA----WEYAQQGGRGGS 189 (394)
T ss_pred HHHHHHHHHHhCCCCc-cccccccHHHHHHHHHHcCCCeecccccccCCCCceeecCHHHHHHH----HHHHHhcCCCCC
Confidence 3455567789999765 4667788876 556788999988876555566667788998887766 888888888899
Q ss_pred cceeeeeec
Q 020219 319 GQVAVETSV 327 (329)
Q Consensus 319 ~~~~~~~~~ 327 (329)
+.|-||.-|
T Consensus 190 ~RVIVE~fv 198 (394)
T COG0027 190 GRVIVEEFV 198 (394)
T ss_pred CcEEEEEEe
Confidence 999998654
No 249
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=44.97 E-value=24 Score=31.78 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=12.0
Q ss_pred EEeCCCCcccCcc-----cHHHHHHHHHHH
Q 020219 49 LFDLDDTLYPYSS-----GIAAACGQNIKD 73 (329)
Q Consensus 49 iFDlDGTL~d~~~-----~~~~~~~~~~~~ 73 (329)
+||+||||.+... .....+.+.+.+
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~ 30 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRA 30 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHH
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHH
Confidence 6899999997443 333444444444
No 250
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=41.49 E-value=19 Score=30.70 Aligned_cols=16 Identities=38% Similarity=0.443 Sum_probs=13.8
Q ss_pred cEEEEeCCCCcccCcc
Q 020219 46 DCLLFDLDDTLYPYSS 61 (329)
Q Consensus 46 k~viFDlDGTL~d~~~ 61 (329)
..+++|+|.||+++..
T Consensus 7 l~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTK 22 (156)
T ss_pred eEEEEeCCCCcccccc
Confidence 6799999999998654
No 251
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=40.15 E-value=46 Score=30.91 Aligned_cols=62 Identities=16% Similarity=0.275 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCh------hchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHH
Q 020219 241 LAIEKALKIASINPQRTLFFEDSV------RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPEL 306 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~------~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~ 306 (329)
+.=..++++++++ +++-=||. .=+++|++.|++.+++.++.. ..+..++.+++++.+++.++
T Consensus 187 e~n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 187 ELEKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARL 254 (256)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHh
Confidence 4445777888885 56655553 348999999999999999864 34457789999999988764
No 252
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=40.13 E-value=36 Score=33.55 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=33.0
Q ss_pred CcHHHHHHHHHHc----CCCCCcEEEEeCCh-----hchHHHHHcCceEEEEcCC
Q 020219 238 PSELAIEKALKIA----SINPQRTLFFEDSV-----RNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 238 p~~~~~~~~l~~~----~v~~~e~l~VGDs~-----~Di~~a~~~G~~~v~v~~~ 283 (329)
.|....+.+.+.+ ++.+++|++|||-. ||+. |+.+| .++|+..+
T Consensus 349 dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP 401 (408)
T PF06437_consen 349 DKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASP 401 (408)
T ss_pred CcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCH
Confidence 3457888888888 89999999999965 6776 55555 57776544
No 253
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=38.75 E-value=18 Score=35.58 Aligned_cols=19 Identities=32% Similarity=0.431 Sum_probs=15.9
Q ss_pred CCccEEEEeCCCCcccCcc
Q 020219 43 AKYDCLLFDLDDTLYPYSS 61 (329)
Q Consensus 43 ~~~k~viFDlDGTL~d~~~ 61 (329)
..-|.+.||+||||+++..
T Consensus 73 ~~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CCcceEEEecCCceeecCC
Confidence 3558899999999998665
No 254
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=37.03 E-value=59 Score=29.91 Aligned_cols=41 Identities=22% Similarity=0.151 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC 169 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~ 169 (329)
-...+.+.+.|+.| +++++++|+.+...+...++.+|+..+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 34456777777765 578999999999999999999998654
No 255
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=36.07 E-value=1.2e+02 Score=28.94 Aligned_cols=46 Identities=26% Similarity=0.229 Sum_probs=28.1
Q ss_pred CCCChhHHHHHHhC-------CCcEEEEeCCC---hhh-HHHHHHhcCCccccceee
Q 020219 129 LKPDPVLRSLLLSL-------PLRKIIFTNAD---KVH-AVKVLSRLGLEDCFEGII 174 (329)
Q Consensus 129 ~~~~pgv~~lL~~L-------~~~~~ivT~~~---~~~-~~~~l~~~gl~~~f~~i~ 174 (329)
-.+.|++.++++.| +.+..++||+. ... +..+.+++|++-..+.++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~ 71 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVI 71 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence 34478888777655 45678999875 333 333447788764344444
No 256
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=34.49 E-value=58 Score=30.10 Aligned_cols=60 Identities=17% Similarity=0.276 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCh-----hchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHH
Q 020219 241 LAIEKALKIASINPQRTLFFEDSV-----RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 304 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~-----~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~ 304 (329)
+.=..++++++++ +++-=||. .=+++|++.|++.+++.++.... ....+.+++++.++|+
T Consensus 184 e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 184 ELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPY-GDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHh
Confidence 4556778888875 56665554 23899999999999999886553 3334799999988875
No 257
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=33.02 E-value=1.1e+02 Score=27.86 Aligned_cols=48 Identities=13% Similarity=0.114 Sum_probs=34.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCccccceeeeec
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE 177 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~ 177 (329)
.+.|...+.|+++ ++++++.|+.+...+...++.+++....+.+++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~N 70 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNN 70 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcC
Confidence 4456666766665 58889999999998999999998754333444443
No 258
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=32.54 E-value=77 Score=29.26 Aligned_cols=63 Identities=19% Similarity=0.293 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChh-----chHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHH
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVR-----NIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~-----Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
+.=..++++++++ +++-=||.. =+++|+..|++.+++.++.... ...++.+++++.+++.+.+
T Consensus 180 e~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 180 ELERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPALPY-ADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHHHhh
Confidence 4445777888875 565544442 4889999999999999886432 3367899999999887754
No 259
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.72 E-value=42 Score=24.50 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=22.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCChhchHHHHH
Q 020219 243 IEKALKIASINPQRTLFFEDSVRNIQAGKR 272 (329)
Q Consensus 243 ~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~ 272 (329)
.+.+|+++|+ ++++||..-||++.+-
T Consensus 7 VqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 7 VQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 5688999998 8999999999998753
No 260
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=30.64 E-value=26 Score=35.09 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=23.2
Q ss_pred HHHHHHHHcCCCCCcEE-EEeCChhchHHHHHcCce
Q 020219 242 AIEKALKIASINPQRTL-FFEDSVRNIQAGKRVGLD 276 (329)
Q Consensus 242 ~~~~~l~~~~v~~~e~l-~VGDs~~Di~~a~~~G~~ 276 (329)
+++.-++.+.+.+.--+ -||....|+.+-+.+|++
T Consensus 481 ayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 481 AYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 33444444455444334 589999999999999887
No 261
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=29.47 E-value=92 Score=27.30 Aligned_cols=46 Identities=11% Similarity=-0.029 Sum_probs=33.5
Q ss_pred cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcc
Q 020219 123 RLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 168 (329)
Q Consensus 123 ~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~ 168 (329)
.+...+-.+.|...+.|+++ +.+++++|+.+...+...++.+++..
T Consensus 11 TLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 11 TLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred CcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 33333445667777777765 57889999999888888888888753
No 262
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=28.71 E-value=97 Score=34.35 Aligned_cols=46 Identities=17% Similarity=0.144 Sum_probs=34.5
Q ss_pred hHHHHHHhCCCcEEEEeCCChhhHHHHHHhcCCccccceeeeeccC
Q 020219 134 VLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETL 179 (329)
Q Consensus 134 gv~~lL~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 179 (329)
.+.+-|.+.++|.+++|+.+-..+..+.+..|+-.....++..+..
T Consensus 712 ~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~ 757 (1140)
T KOG0208|consen 712 RVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELE 757 (1140)
T ss_pred HHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEecc
Confidence 4444455557999999999888888888999987777776665533
No 263
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=28.32 E-value=3.1e+02 Score=26.27 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=74.4
Q ss_pred hHHHHHHhCCCc---EEEEeCCChhhHHHHHHhcCCccccceeeeeccCCCCCCCCCCCChhhHHHHHhhhccccCCCCC
Q 020219 134 VLRSLLLSLPLR---KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 210 (329)
Q Consensus 134 gv~~lL~~L~~~---~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+|...|..++.+ .+.+-....++....++..|+...|-.+-.. ++.++.....-...++..|.|
T Consensus 41 NVa~vL~~lG~~~~a~GflGg~tg~~~~~~l~~~gi~~~fv~v~g~-------------TRinvki~~~~~~~~Tein~~ 107 (310)
T COG1105 41 NVARVLKDLGIPVTALGFLGGFTGEFFVALLKDEGIPDAFVEVKGD-------------TRINVKILDEEDGEETEINFP 107 (310)
T ss_pred eHHHHHHHcCCCceEEEecCCccHHHHHHHHHhcCCCceEEEccCC-------------CeeeEEEEecCCCcEEEecCC
Confidence 378889999866 3455566777889999999987655443211 111111111111111222211
Q ss_pred cccccccccCCCCCccccCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEeCCh-----hc-----hHHHHHcCceEE
Q 020219 211 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSV-----RN-----IQAGKRVGLDTV 278 (329)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~l~~~~--v~~~e~l~VGDs~-----~D-----i~~a~~~G~~~v 278 (329)
+ ..-++.-++.+++++. +...+++++.=|. .| +..+++.|.+.+
T Consensus 108 G------------------------p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vi 163 (310)
T COG1105 108 G------------------------PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVI 163 (310)
T ss_pred C------------------------CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEE
Confidence 1 1223355666666552 5667777766543 22 455777787777
Q ss_pred EEcCCCC-----CCCCCEEeCCHhHHHHHH
Q 020219 279 LIGKSQR-----VKGADYAFESIHNIKEAI 303 (329)
Q Consensus 279 ~v~~~~~-----~~~ad~i~~~l~el~~~l 303 (329)
.-..+.. +..|..|=.+.+||.+++
T Consensus 164 lD~Sg~~L~~~L~~~P~lIKPN~~EL~~~~ 193 (310)
T COG1105 164 LDTSGEALLAALEAKPWLIKPNREELEALF 193 (310)
T ss_pred EECChHHHHHHHccCCcEEecCHHHHHHHh
Confidence 7655542 455888888888876654
No 264
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=28.15 E-value=4.9e+02 Score=24.11 Aligned_cols=44 Identities=11% Similarity=0.278 Sum_probs=33.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCCh---hchHHHHHcCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSV---RNIQAGKRVGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~---~Di~~a~~~G~~~v~v~~~ 283 (329)
|--++..++.++++.+++ +.|+-+. +|...|-+.|...+++|+.
T Consensus 160 Gi~n~~~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 160 GIQNPYNLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp -SSTHHHHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred CCCCHHHHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 566789999999999875 5666555 7999999999999999864
No 265
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the ATP-binding domain found in the large subunit of carbamoyl phosphate synthase, as well as in related proteins.; GO: 0003824 catalytic activity, 0005524 ATP binding, 0008152 metabolic process; PDB: 3U9S_A 3U9T_A 2C00_B 2VQD_A 1W96_B 1W93_A 1M6V_C 1CS0_C 1C30_E 1C3O_G ....
Probab=28.04 E-value=1.3e+02 Score=26.82 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCCCCcEEEE-eCCh-hchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHhccCcCccccC
Q 020219 241 LAIEKALKIASINPQRTLFF-EDSV-RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYP 318 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~V-GDs~-~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~~~~~~~~~~ 318 (329)
..+.++++++|++.-.-.-. -++. .=++.|++.|.+.+.-+...--...-.++.+.++|.+.+.+...... ..++.
T Consensus 3 ~~~~~~~~~~gvp~~pg~~~~~~~~eea~~~a~~iGyPVliKas~ggGG~gm~iv~~~~eL~~~~~~~~~~s~--~~fg~ 80 (211)
T PF02786_consen 3 IRFRKLAKKLGVPVPPGSTVPISSVEEALEFAEEIGYPVLIKASAGGGGRGMRIVHNEEELEEAFERAQRESP--AAFGD 80 (211)
T ss_dssp HHHHHHHHHTT-BBSSBESSSBSSHHHHHHHHHHH-SSEEEEETTSSTTTSEEEESSHHHHHHHHHHHHHHHH--HHHST
T ss_pred HHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhcCCceEEeecccccccccccccchhhhhhhhhhccccCc--ccccc
Confidence 45788999999754222222 2444 44777888999966655444455566789999999999877555432 23556
Q ss_pred cceeeeeec
Q 020219 319 GQVAVETSV 327 (329)
Q Consensus 319 ~~~~~~~~~ 327 (329)
++|-||-.+
T Consensus 81 ~~v~iek~i 89 (211)
T PF02786_consen 81 GPVLIEKFI 89 (211)
T ss_dssp S-EEEEE--
T ss_pred ceEEEeeeh
Confidence 677776654
No 266
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=26.52 E-value=1.1e+02 Score=26.81 Aligned_cols=40 Identities=10% Similarity=-0.032 Sum_probs=30.8
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 168 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~ 168 (329)
-.+.|...+.|+++ +.+++++|+.+...+...++.+|+..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 19 RRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 34556677777665 57889999999888888888888764
No 267
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=26.20 E-value=39 Score=31.56 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=29.6
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcC
Q 020219 129 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLG 165 (329)
Q Consensus 129 ~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~g 165 (329)
+.-+|++.++|+... +..++.|++...++..++..+.
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD 168 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILD 168 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHcc
Confidence 344699999999885 6678889988888888888764
No 268
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=25.23 E-value=3.5e+02 Score=26.30 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
.....+++++|++--+...+.|...-.+.+...|.+.+.-+.+.....--.++.+.+++.+++.+++.
T Consensus 69 ~~~k~~l~~~gIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~~gkGV~iv~~~~el~~a~~~~~~ 136 (379)
T PRK13790 69 LFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYG 136 (379)
T ss_pred HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh
Confidence 55668899999987666666554333445567898888877766655667899999999999988763
No 269
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=24.91 E-value=2.3e+02 Score=27.06 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=22.6
Q ss_pred ChhHHHHH---HhCCCcEEEEeCCChhhH---HHHHHhcCCc
Q 020219 132 DPVLRSLL---LSLPLRKIIFTNADKVHA---VKVLSRLGLE 167 (329)
Q Consensus 132 ~pgv~~lL---~~L~~~~~ivT~~~~~~~---~~~l~~~gl~ 167 (329)
.||+.+.+ ..++.+++++||++...- ..+.+++|+.
T Consensus 40 ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 40 IPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 35555554 555788999999765443 3445566765
No 270
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=24.40 E-value=2.2e+02 Score=22.30 Aligned_cols=24 Identities=8% Similarity=0.004 Sum_probs=19.2
Q ss_pred cEEEEeCChhchHHHHHcCceEEEE
Q 020219 256 RTLFFEDSVRNIQAGKRVGLDTVLI 280 (329)
Q Consensus 256 e~l~VGDs~~Di~~a~~~G~~~v~v 280 (329)
++.+||| ..-+-.++-+|+..+.+
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~~ 25 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVYE 25 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEEe
Confidence 4789999 66688899999986653
No 271
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=24.09 E-value=1.4e+02 Score=26.79 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=30.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCc
Q 020219 129 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 167 (329)
Q Consensus 129 ~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~ 167 (329)
-.+.+...+.|+++ +.+++++|+.+...+...+.++++.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 34556667666665 6888999999988888889988875
No 272
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=23.70 E-value=91 Score=32.88 Aligned_cols=51 Identities=18% Similarity=0.281 Sum_probs=39.6
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCc-ccc-ceeeeecc
Q 020219 128 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLE-DCF-EGIICFET 178 (329)
Q Consensus 128 ~~~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~-~~f-~~i~~~~~ 178 (329)
.+++.|++.+||+++. +.+.+.|-+...++..+++-+.-. .+| |+|++-+.
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 4678999999999985 778999999999998888765322 345 56777654
No 273
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=23.20 E-value=1.5e+02 Score=25.93 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=27.0
Q ss_pred HHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCc
Q 020219 135 LRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 167 (329)
Q Consensus 135 v~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~ 167 (329)
..+.|+.+ +++++++|+.+...+...++.+|+.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 55555554 6889999999999999999999875
No 274
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=22.80 E-value=1.8e+02 Score=27.48 Aligned_cols=48 Identities=23% Similarity=0.194 Sum_probs=38.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHH------cCceEEEEcCC
Q 020219 236 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR------VGLDTVLIGKS 283 (329)
Q Consensus 236 ~Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~------~G~~~v~v~~~ 283 (329)
.-|.++.|..++.++|++.+.++++=|..+...+++. .|..-|.+-.|
T Consensus 71 ~lp~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdG 124 (285)
T COG2897 71 MLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDG 124 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecC
Confidence 4688999999999999999888888777777666655 59998777544
No 275
>PRK00885 phosphoribosylamine--glycine ligase; Provisional
Probab=21.89 E-value=6.3e+02 Score=24.66 Aligned_cols=67 Identities=10% Similarity=0.040 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhch-HHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNI-QAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di-~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
.....+++++|++.-+...+.+ ..++ +.++..|.+.+.-+.......--.++.+.+++.+.+.+++.
T Consensus 104 ~~~k~~l~~~gip~p~~~~~~~-~~~~~~~~~~~~~P~VvKP~~~~gs~Gv~~v~~~~el~~~~~~~~~ 171 (420)
T PRK00885 104 AFAKDFMARYGIPTAAYETFTD-AEEALAYLDEKGAPIVVKADGLAAGKGVVVAMTLEEAKAAVDDMLA 171 (420)
T ss_pred HHHHHHHHHcCCCCCCeEEeCC-HHHHHHHHHHcCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHhh
Confidence 5567788999997666666643 4443 44567788888877665555567789999999999888765
No 276
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis. This family does not contain all known ATP-grasp domain members. All the enzymes of this family possess ATP-dependent carboxylate-amine ligase activity, and their catalytic mechanisms are likely to include acylphosphate intermediates.; PDB: 3K5H_C 3K5I_C 3AX6_A 3Q2O_B 3QFF_B 3R5H_A 3ORQ_B 3ORR_B 4E4T_B 2Z04_A ....
Probab=21.46 E-value=4e+02 Score=23.01 Aligned_cols=59 Identities=19% Similarity=0.266 Sum_probs=39.7
Q ss_pred HHHcCCCCCcEEEEeCChhchHH-HHHcCceEEEE-cCCCCCCCCCEEeCCHhHHHHHHHHH
Q 020219 247 LKIASINPQRTLFFEDSVRNIQA-GKRVGLDTVLI-GKSQRVKGADYAFESIHNIKEAIPEL 306 (329)
Q Consensus 247 l~~~~v~~~e~l~VGDs~~Di~~-a~~~G~~~v~v-~~~~~~~~ad~i~~~l~el~~~l~~~ 306 (329)
|+++|++-..-. .=++..|+.. +.+.|.++++- .++.-.-+-.+++.+-+|+.++.+.+
T Consensus 1 l~~~gip~~~~~-~i~~~~~l~~a~~~iG~P~vlK~~~~GYDGkGq~~i~~~~dl~~a~~~~ 61 (172)
T PF02222_consen 1 LDELGIPTAPYA-TIDSLEDLEEAAESIGFPAVLKTRRGGYDGKGQFVIRSEEDLEKAWQEL 61 (172)
T ss_dssp HHHTT--B-EEE-EESSHHHHHHHHHHHTSSEEEEESSSSCTTTTEEEESSGGGHHHHHHHT
T ss_pred CcccCCCCCCeE-EECCHHHHHHHHHHcCCCEEEEccCcCcCCCccEEECCHHHHHHHHHhc
Confidence 466777655444 4456667655 56779999887 44445566678999999999987776
No 277
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=21.43 E-value=1.4e+02 Score=22.39 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=34.6
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCc
Q 020219 237 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 275 (329)
Q Consensus 237 Kp~~~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~ 275 (329)
-|-...+..+++++.++++.+..|-+..-.|..++.+|-
T Consensus 26 aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 26 TPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred CchHHHHHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 577789999999999999999999888888888888884
No 278
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=21.40 E-value=1.6e+02 Score=26.69 Aligned_cols=47 Identities=23% Similarity=0.341 Sum_probs=35.6
Q ss_pred ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcc
Q 020219 122 GRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 168 (329)
Q Consensus 122 ~~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~ 168 (329)
+.+...+..+.+-+++.|+.+ +++++++|+.+...+...++.+++..
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 334444444667777777754 68899999999999999999999875
No 279
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=21.28 E-value=6.6e+02 Score=24.91 Aligned_cols=68 Identities=13% Similarity=0.048 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHh
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 308 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~ 308 (329)
.....+++++|++..+-..+.|-..-...++..|.+.+.-+.+....+--.++.+.+|+.+.+.+++.
T Consensus 110 ~~~K~~l~~~gIpt~~~~~~~~~~ea~~~~~~~~~PvVVKp~~~~~gkGV~vv~~~eel~~a~~~~~~ 177 (426)
T PRK13789 110 HFAKSLMKEAKIPTASYKTFTEYSSSLSYLESEMLPIVIKADGLAAGKGVTVATEKKMAKRALKEIFK 177 (426)
T ss_pred HHHHHHHHHcCCCCCCeEeeCCHHHHHHHHHhcCCCEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHh
Confidence 56778899999986665555432222344567788888877776666667899999999999988774
No 280
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=21.18 E-value=3.1e+02 Score=27.00 Aligned_cols=42 Identities=14% Similarity=0.272 Sum_probs=32.2
Q ss_pred CCChhHHHHHHhCC--CcEEEEeCCChhhHHHHHHhcCCccccc
Q 020219 130 KPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFE 171 (329)
Q Consensus 130 ~~~pgv~~lL~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~ 171 (329)
.-.||+..+|..+. +.++++|+...-.+..++.++.-..++.
T Consensus 214 ~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~Is 257 (393)
T KOG2832|consen 214 KKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYIS 257 (393)
T ss_pred ccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEE
Confidence 35799999999996 6788999987777787888765444444
No 281
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=21.10 E-value=1.7e+02 Score=26.72 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=33.2
Q ss_pred cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcc
Q 020219 123 RLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 168 (329)
Q Consensus 123 ~~~~~~~~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~ 168 (329)
.+...+-.+.+...+.|+++ +.++++.|+.+...+...++.+|+..
T Consensus 12 TLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 12 TLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 33333334556677777666 57788999999998999999998753
No 282
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=20.92 E-value=6.6e+02 Score=23.08 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCChhchHHHHHcCceEEEEcCCCCCCCCCEEeCCHhHHHHHHHHHH
Q 020219 241 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 307 (329)
Q Consensus 241 ~~~~~~l~~~~v~~~e~l~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~ 307 (329)
.....+++++|++--+.+.+.+...-...+...|.+.+.-+........-.++.+.+++.+.+.++.
T Consensus 100 ~~~k~~l~~~gIp~p~~~~~~~~~~~~~~~~~~~~P~ivKP~~g~~s~Gv~~v~~~~el~~~~~~~~ 166 (304)
T PRK01372 100 LRTKLVWQAAGLPTPPWIVLTREEDLLAAIDKLGLPLVVKPAREGSSVGVSKVKEEDELQAALELAF 166 (304)
T ss_pred HHHHHHHHHCCCCCCCEEEEeCcchHHHHHhhcCCCEEEeeCCCCCCCCEEEeCCHHHHHHHHHHHH
Confidence 5677889999998666666655443345567788887776655554455678899999988887764
No 283
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=20.82 E-value=2.3e+02 Score=21.63 Aligned_cols=24 Identities=13% Similarity=0.245 Sum_probs=19.0
Q ss_pred EEEEeCChhchHHHHHcCceEEEEc
Q 020219 257 TLFFEDSVRNIQAGKRVGLDTVLIG 281 (329)
Q Consensus 257 ~l~VGDs~~Di~~a~~~G~~~v~v~ 281 (329)
+.+|||. .-+...+-+|+....+.
T Consensus 1 IavIGd~-~~v~gFrLaGv~~~~~~ 24 (95)
T PF01990_consen 1 IAVIGDR-DTVLGFRLAGVEGVYVN 24 (95)
T ss_dssp EEEEE-H-HHHHHHHHTTSEEEEES
T ss_pred CEEEeCH-HHHHHHHHcCCCCccCC
Confidence 4789998 66788999999988875
No 284
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=20.31 E-value=4.9e+02 Score=25.38 Aligned_cols=69 Identities=13% Similarity=0.087 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCChhc-hHHHHHcCce-EEEEcCCCCCCCCCEEeCCHhHHHHHHHHHHhc
Q 020219 240 ELAIEKALKIASINPQRTLFFEDSVRN-IQAGKRVGLD-TVLIGKSQRVKGADYAFESIHNIKEAIPELWES 309 (329)
Q Consensus 240 ~~~~~~~l~~~~v~~~e~l~VGDs~~D-i~~a~~~G~~-~v~v~~~~~~~~ad~i~~~l~el~~~l~~~~~~ 309 (329)
......+++++|++.-+...+.+ ..+ .+.+...|.+ .+.-+.......--.++.+.+++.+.+.+++..
T Consensus 105 K~~~k~~l~~~gIp~p~~~~~~~-~~~~~~~~~~~g~P~~VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~ 175 (423)
T TIGR00877 105 KAFAKDFMKRYGIPTAEYEVFTD-PEEALSYIQEKGAPAIVVKADGLAAGKGVIVAKTNEEAIKAVEEILEQ 175 (423)
T ss_pred HHHHHHHHHHCCCCCCCeEEECC-HHHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHH
Confidence 35677889999998777666654 444 3456678888 776665544445667899999999888877654
No 285
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=20.01 E-value=1.8e+02 Score=27.85 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=30.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChhhHHHHHHhcCCcc
Q 020219 130 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 168 (329)
Q Consensus 130 ~~~pgv~~lL~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~ 168 (329)
...+-+.+.|++| ++++++.|+.....+....+++++..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3445566666655 58899999999999999999999864
Done!