Query 020226
Match_columns 329
No_of_seqs 193 out of 1759
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 13:42:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1E-73 3.5E-78 556.0 33.8 307 17-329 2-316 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 1.8E-70 6.3E-75 537.1 34.8 320 2-329 13-343 (520)
3 3ifg_A Succinate-semialdehyde 100.0 1.4E-69 4.7E-74 527.4 34.0 302 20-329 11-321 (484)
4 3rh9_A Succinate-semialdehyde 100.0 4.5E-69 1.6E-73 525.7 37.2 303 19-329 9-320 (506)
5 3b4w_A Aldehyde dehydrogenase; 100.0 1E-68 3.4E-73 522.6 36.0 306 18-329 5-318 (495)
6 1bxs_A Aldehyde dehydrogenase; 100.0 1.5E-68 5E-73 521.9 37.2 303 22-329 21-333 (501)
7 3ek1_A Aldehyde dehydrogenase; 100.0 4.7E-69 1.6E-73 525.3 33.1 301 21-329 32-341 (504)
8 2o2p_A Formyltetrahydrofolate 100.0 8.3E-69 2.8E-73 525.1 34.9 303 22-329 37-352 (517)
9 4f3x_A Putative aldehyde dehyd 100.0 1.6E-68 5.4E-73 521.3 33.9 305 16-329 20-333 (498)
10 3i44_A Aldehyde dehydrogenase; 100.0 3.1E-68 1.1E-72 519.1 35.0 304 17-329 21-333 (497)
11 3u4j_A NAD-dependent aldehyde 100.0 2.7E-68 9.1E-73 522.7 34.5 302 20-329 21-334 (528)
12 1a4s_A ALDH, betaine aldehyde 100.0 4.9E-68 1.7E-72 518.7 35.5 300 21-329 19-327 (503)
13 3k2w_A Betaine-aldehyde dehydr 100.0 2E-68 6.8E-73 521.1 32.7 305 17-329 8-321 (497)
14 2ve5_A BADH, betaine aldehyde 100.0 5.6E-68 1.9E-72 517.9 34.3 307 16-329 1-316 (490)
15 3iwj_A Putative aminoaldehyde 100.0 6.9E-68 2.4E-72 518.0 34.5 305 19-329 5-324 (503)
16 3r31_A BADH, betaine aldehyde 100.0 3.3E-68 1.1E-72 520.8 31.8 300 18-329 11-322 (517)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 7.6E-68 2.6E-72 518.8 33.7 300 22-329 27-335 (515)
18 4e4g_A Methylmalonate-semialde 100.0 6.5E-68 2.2E-72 519.2 33.2 305 16-329 21-335 (521)
19 1o04_A Aldehyde dehydrogenase, 100.0 9E-68 3.1E-72 516.2 33.8 303 22-329 20-332 (500)
20 3prl_A NADP-dependent glyceral 100.0 1.1E-67 3.7E-72 516.2 34.1 299 21-329 11-323 (505)
21 2imp_A Lactaldehyde dehydrogen 100.0 7.9E-68 2.7E-72 515.3 32.4 305 17-329 2-315 (479)
22 1wnd_A Putative betaine aldehy 100.0 1.2E-67 4.2E-72 514.6 33.2 308 13-329 15-331 (495)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 1.7E-67 5.8E-72 518.1 34.3 300 20-329 36-351 (538)
24 3jz4_A Succinate-semialdehyde 100.0 1.5E-67 5E-72 513.6 32.2 303 19-329 7-318 (481)
25 4dng_A Uncharacterized aldehyd 100.0 9E-67 3.1E-71 508.8 33.8 303 19-329 4-317 (485)
26 2w8n_A Succinate-semialdehyde 100.0 9.4E-67 3.2E-71 508.1 32.0 298 22-329 13-323 (487)
27 1t90_A MMSDH, probable methylm 100.0 1.7E-66 5.7E-71 506.5 32.5 301 20-329 4-313 (486)
28 1euh_A NADP dependent non phos 100.0 2.3E-66 7.7E-71 504.5 33.3 298 20-329 3-314 (475)
29 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.9E-66 6.6E-71 509.2 32.5 299 21-329 37-352 (516)
30 3ty7_A Putative aldehyde dehyd 100.0 1.1E-66 3.7E-71 507.4 30.1 301 18-329 4-312 (478)
31 3r64_A NAD dependent benzaldeh 100.0 3.7E-66 1.3E-70 506.3 33.3 304 18-329 9-324 (508)
32 3pqa_A Lactaldehyde dehydrogen 100.0 4.3E-66 1.5E-70 502.8 29.8 292 24-329 2-305 (486)
33 3ju8_A Succinylglutamic semial 100.0 2E-65 6.9E-70 499.3 34.1 298 22-329 6-313 (490)
34 2j6l_A Aldehyde dehydrogenase 100.0 1.3E-65 4.5E-70 501.5 32.8 299 20-329 22-333 (500)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.6E-65 5.5E-70 500.7 31.4 297 21-329 18-327 (501)
36 3ros_A NAD-dependent aldehyde 100.0 7.7E-65 2.6E-69 493.7 30.0 283 38-329 5-295 (484)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 2.9E-65 9.8E-70 503.5 26.2 301 19-329 61-378 (563)
38 3v4c_A Aldehyde dehydrogenase 100.0 1.4E-63 4.7E-68 490.5 30.8 296 18-325 26-351 (528)
39 4f9i_A Proline dehydrogenase/d 100.0 1E-63 3.5E-68 517.8 31.2 301 20-329 530-845 (1026)
40 3etf_A Putative succinate-semi 100.0 9.4E-63 3.2E-67 478.0 31.3 286 35-329 5-298 (462)
41 2y53_A Aldehyde dehydrogenase 100.0 1.2E-62 4.1E-67 484.4 25.7 295 21-329 7-329 (534)
42 1ez0_A ALDH, aldehyde dehydrog 100.0 1.1E-61 3.9E-66 475.0 29.2 286 33-325 3-317 (510)
43 4h7n_A Aldehyde dehydrogenase; 100.0 1.3E-61 4.3E-66 471.0 27.5 284 34-329 3-296 (474)
44 3lns_A Benzaldehyde dehydrogen 100.0 1.7E-60 5.8E-65 461.1 31.6 280 37-325 6-297 (457)
45 3sza_A Aldehyde dehydrogenase, 100.0 3.5E-56 1.2E-60 431.6 31.4 262 55-325 14-287 (469)
46 3haz_A Proline dehydrogenase; 100.0 1.2E-56 4.2E-61 464.0 28.5 269 53-329 544-824 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 4.8E-56 1.6E-60 429.7 15.5 258 40-311 10-285 (463)
48 3my7_A Alcohol dehydrogenase/a 100.0 1.7E-52 5.7E-57 404.6 23.8 256 53-321 1-269 (452)
49 3k9d_A LMO1179 protein, aldehy 100.0 2.9E-52 9.9E-57 404.2 21.6 258 52-322 5-275 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 6.7E-52 2.3E-56 399.4 22.9 257 58-328 25-308 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 8.9E-52 3E-56 396.7 22.0 256 57-325 12-294 (427)
52 1vlu_A Gamma-glutamyl phosphat 100.0 3.5E-52 1.2E-56 403.2 17.6 253 60-325 15-296 (468)
53 4gic_A HDH, histidinol dehydro 76.6 48 0.0017 30.7 22.5 136 149-295 119-266 (423)
54 3v4g_A Arginine repressor; vib 71.6 18 0.00062 29.5 8.1 38 185-225 115-152 (180)
55 1b93_A Protein (methylglyoxal 63.7 17 0.00057 28.8 6.2 114 161-300 12-135 (152)
56 2xw6_A MGS, methylglyoxal synt 62.7 2.3 8E-05 33.1 1.0 75 182-267 26-109 (134)
57 2yvq_A Carbamoyl-phosphate syn 58.8 17 0.00057 28.3 5.4 72 187-269 50-131 (143)
58 3v42_A Folliculin; tumor suppr 58.8 12 0.00041 31.8 4.8 69 177-253 21-89 (226)
59 3lap_A Arginine repressor; arg 53.9 84 0.0029 25.2 9.4 37 185-225 110-146 (170)
60 3fxd_A Protein ICMQ; helix bun 50.0 49 0.0017 21.3 5.7 46 56-107 5-50 (57)
61 3mwd_B ATP-citrate synthase; A 49.3 1.5E+02 0.005 26.6 11.2 130 185-328 167-321 (334)
62 1vmd_A MGS, methylglyoxal synt 43.7 21 0.0007 29.1 3.7 119 156-300 22-151 (178)
63 1b4b_A Arginine repressor; cor 40.7 58 0.002 21.9 5.2 36 186-225 12-47 (71)
64 2zfz_A Arginine repressor; DNA 40.3 61 0.0021 22.3 5.3 36 186-225 20-55 (79)
65 2p5m_A Arginine repressor; alp 37.0 57 0.0019 22.7 4.8 36 186-225 24-59 (83)
66 2ioj_A Hypothetical protein AF 36.8 24 0.00082 27.0 3.1 44 217-260 53-96 (139)
67 3pzy_A MOG; ssgcid, seattle st 36.4 45 0.0015 26.5 4.7 50 201-251 28-79 (164)
68 1xxa_A ARGR, arginine represso 36.1 48 0.0016 22.8 4.2 37 186-225 14-50 (78)
69 3iwt_A 178AA long hypothetical 32.9 62 0.0021 25.7 5.1 52 200-251 40-94 (178)
70 1y5e_A Molybdenum cofactor bio 30.3 33 0.0011 27.3 3.0 52 200-251 31-85 (169)
71 3rfq_A Pterin-4-alpha-carbinol 27.6 53 0.0018 26.7 3.8 52 201-252 50-103 (185)
72 1kae_A HDH, histidinol dehydro 26.8 3.9E+02 0.013 24.8 20.0 162 122-295 87-260 (434)
73 3fgh_A Transcription factor A, 25.7 65 0.0022 20.9 3.4 29 76-104 36-64 (67)
74 1b4a_A Arginine repressor; hel 25.0 1.1E+02 0.0039 23.8 5.1 36 186-225 90-125 (149)
75 2i2c_A Probable inorganic poly 24.7 1.1E+02 0.0037 26.3 5.5 88 190-295 5-94 (272)
76 3nol_A Glutamine cyclotransfer 23.5 95 0.0033 26.7 4.8 33 25-57 179-212 (262)
77 3nok_A Glutaminyl cyclase; bet 23.0 93 0.0032 26.9 4.6 32 25-56 188-220 (268)
78 1gt0_D Transcription factor SO 21.2 1.7E+02 0.0058 19.5 5.0 27 76-102 40-66 (80)
79 3mbr_X Glutamine cyclotransfer 21.0 1E+02 0.0034 26.2 4.4 32 25-56 157-189 (243)
80 3gtx_A Organophosphorus hydrol 20.8 4E+02 0.014 23.5 8.7 95 175-274 174-283 (339)
81 3nme_A Ptpkis1 protein, SEX4 g 20.7 85 0.0029 27.4 4.0 65 21-91 220-285 (294)
82 1use_A VAsp, vasodilator-stimu 20.5 1.1E+02 0.0039 18.6 3.2 27 86-112 14-40 (45)
83 1v63_A Nucleolar transcription 20.5 1.1E+02 0.0039 21.9 4.0 33 76-108 44-76 (101)
84 2co9_A Thymus high mobility gr 20.4 2.4E+02 0.0081 20.0 6.4 34 76-109 55-88 (102)
85 2eqz_A High mobility group pro 20.1 89 0.003 21.5 3.3 29 76-104 55-83 (86)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1e-73 Score=556.01 Aligned_cols=307 Identities=41% Similarity=0.675 Sum_probs=291.2
Q ss_pred CCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 020226 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (329)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l 96 (329)
..+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|+++|++++++|
T Consensus 2 ~~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l 79 (490)
T 2wme_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL 79 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 345567899999999988889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhh
Q 020226 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (329)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 176 (329)
++++++|++++++|+|||+.+++..|+..+++.++||+.+++++.++..+...+...+++++|+|||++|+|||||++..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhh
Confidence 99999999999999999999998556999999999999999988888777766777889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHH
Q 020226 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (329)
Q Consensus 177 ~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (329)
+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|++|.+
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999887
Q ss_pred HhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhccc
Q 020226 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKL 328 (329)
Q Consensus 257 ~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~v 328 (329)
.++.+++||+++|||||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++
T Consensus 240 ~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~G---Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~l-~v 315 (490)
T 2wme_A 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSG---QVCTNGTRVFIHRSQQARFEAKVLERVQRI-RL 315 (490)
T ss_dssp HHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCCCEEEEEGGGHHHHHHHHHHHHHTC-CB
T ss_pred hhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCC---CcCCCceeeccchhHHHHHHHHHHHHHHhC-cC
Confidence 55544899999999999999999999999999999999999999 99999999 99999999999988 66
Q ss_pred C
Q 020226 329 G 329 (329)
Q Consensus 329 g 329 (329)
|
T Consensus 316 G 316 (490)
T 2wme_A 316 G 316 (490)
T ss_dssp S
T ss_pred C
Confidence 5
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.8e-70 Score=537.11 Aligned_cols=320 Identities=37% Similarity=0.594 Sum_probs=294.6
Q ss_pred CCCCCCccccccccCCCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhc--ccCCCCC
Q 020226 2 EGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPR 79 (329)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~--~~g~w~~ 79 (329)
+|+++.-...+-|.......+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| + .|+.
T Consensus 13 ~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~ 90 (520)
T 3ed6_A 13 LGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQ 90 (520)
T ss_dssp ------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTT
T ss_pred cCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--cccc
Confidence 46667777766666555667789999999987778899999999999999999999999999999999999 8 8999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEee
Q 020226 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE 158 (329)
Q Consensus 80 ~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (329)
++..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+.. .+...++.++
T Consensus 91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (520)
T 3ed6_A 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE 169 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence 9999999999999999999999999999999999999998 5999999999999999988776655543 3556789999
Q ss_pred cCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCC
Q 020226 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238 (329)
Q Consensus 159 P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~ 238 (329)
|+|||++|+|||||++..+++++|||++||+||+|||+.+|+++.++++++.++|+|+|+||+++|++.++++.|+.||+
T Consensus 170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~ 249 (520)
T 3ed6_A 170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE 249 (520)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred CCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh-------
Q 020226 239 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR------- 311 (329)
Q Consensus 239 v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r------- 311 (329)
|+.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++|
T Consensus 250 vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G---Q~C~a~~rvlV~~~i 325 (520)
T 3ed6_A 250 VDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAG---QVCSAGSRILVQNSI 325 (520)
T ss_dssp CSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---TSTTCCCEEEEEHHH
T ss_pred cCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCC---CCcccCceEEEcHHH
Confidence 9999999999999999999998 899999999999999999999999999999999999999 99999999
Q ss_pred -HHHHHHHHHHHHhhcccC
Q 020226 312 -KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 312 -d~f~~~l~~~~~~~~~vg 329 (329)
|+|+++|+++++++ ++|
T Consensus 326 ~d~f~~~l~~~~~~l-~vG 343 (520)
T 3ed6_A 326 KDKFEQALIDRVKKI-KLG 343 (520)
T ss_dssp HHHHHHHHHHHHTTC-CBC
T ss_pred HHHHHHHHHHHHHhc-cCC
Confidence 99999999999887 655
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.4e-69 Score=527.41 Aligned_cols=302 Identities=38% Similarity=0.610 Sum_probs=285.8
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 88 (484)
T 3ifg_A 11 LRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIAN 88 (484)
T ss_dssp SCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhhhHH
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 178 (329)
+++|++++++|+|||+.++. .|+..+++.++||+.++++..+...+.. .+...++.++|+|||++|+|||||++..++
T Consensus 89 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 89 SDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 99999999999999999987 5999999999999999887766555533 355678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHh
Q 020226 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (329)
Q Consensus 179 ~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (329)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 259 a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 248 a~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 321 (484)
T 3ifg_A 248 AP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNG---QTCVCTNRFFVHERVYDAFADKLAAAVSKL-KVG 321 (484)
T ss_dssp GG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCCCEEEEEGGGHHHHHHHHHHHHHTC-CBS
T ss_pred hc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCC---CcccCCCeEEEcHHHHHHHHHHHHHHHHhc-cCC
Confidence 98 899999999999999999999999999999999999999 99999999 99999999999887 655
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.5e-69 Score=525.67 Aligned_cols=303 Identities=33% Similarity=0.538 Sum_probs=287.7
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 020226 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (329)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~ 98 (329)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999887788999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEe-ecCeeEEeecCcCcchhhhH
Q 020226 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 177 (329)
++++|++++++|+|||+.++. .|+..+++.++|++..+++..+...+...+...++.+ +|+|||++|+|||||++..+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999998 6999999999999999988877655544455678888 99999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 258 ~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 320 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGG---QTCVCANRIFVHEKVADAFGQKLAERVNKM-TVG 320 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CSSSSCCEEEEETTTHHHHHHHHHHHHHHC-CBS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCC---CCcccCcEEEEcHHHHHHHHHHHHHHHHhc-cCC
Confidence 998 899999999999999999999999999999999999999 99999999 99999999999887 554
No 5
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-68 Score=522.65 Aligned_cols=306 Identities=38% Similarity=0.614 Sum_probs=286.4
Q ss_pred CccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 020226 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (329)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~ 97 (329)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|.|+.+|..+|.++|++++++|+
T Consensus 5 ~~~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~ 84 (495)
T 3b4w_A 5 ATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLA 84 (495)
T ss_dssp CEECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHH
Confidence 33445789999999876678899999999999999999999999999999999998556999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
+++++|++++++|+|||+.++...|+..+++.++||+..++++.++..+.+.+...++.++|+|||++|+|||||++..+
T Consensus 85 ~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 164 (495)
T 3b4w_A 85 ERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAV 164 (495)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHH
Confidence 99999999999999999999864699999999999999998887765554434456899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 165 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~ 243 (495)
T 3b4w_A 165 NKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRR 243 (495)
T ss_dssp HHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 88899999999999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 258 ~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 244 aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~g 318 (495)
T 3b4w_A 244 AAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAG---QGCVNQTRILAPRSRYDEIVAAVTNFVTAL-PVG 318 (495)
T ss_dssp HHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGG---CCTTCEEEEEEEGGGHHHHHHHHHHHHHHS-CBC
T ss_pred hhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCC---CCCCCCeEEEEcccHHHHHHHHHHHHHHhc-CCC
Confidence 998 899999999999999999999999999999999999999 99999999 99999999999887 554
No 6
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.5e-68 Score=521.87 Aligned_cols=303 Identities=53% Similarity=0.847 Sum_probs=283.7
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 020226 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (329)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g-~w~~~~~~~R~~~l~~~a~~l~~~~ 100 (329)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.| .|+.++..+|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987667889999999999999999999999999999999999843 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHH
Q 020226 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (329)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 180 (329)
++|++++++|+|||+.++...|+..+++.++||+..+++..+...+...+...++.++|+|||++|+|||||++..++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998765799999999999999998877665444334556899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhh-
Q 020226 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA- 259 (329)
Q Consensus 181 ~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a- 259 (329)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999987889999999999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 333 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQG---QCCIAASRLFVEESIYDEFVRRSVERAKKY-VLG 333 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTT---CCTTCCCEEEEEHHHHHHHHHHHHHHHTCC-CBS
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCC---CCCCCCCEEEEchhHHHHHHHHHHHHHHhc-CCC
Confidence 6 899999999999999999999999999999999999999 99999999 99999999999887 554
No 7
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=4.7e-69 Score=525.32 Aligned_cols=301 Identities=36% Similarity=0.626 Sum_probs=284.8
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 020226 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~ 100 (329)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhhhHHH
Q 020226 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (329)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 179 (329)
++|++++++|+|||+.++. .|+..+++.++||+.++++..+...+.. .+...++.++|+|||++|+|||||++..+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999987 5999999999999999887766554433 2456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhh
Q 020226 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (329)
Q Consensus 180 ~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a 259 (329)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999978889999999999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 341 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAG---QTCVCANRIYVQRGVYDKFAEKLAAKVKEL-KVG 341 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTSEEEEEEEHHHHHHHHHHHHHHHHTC-CBS
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCC---CCCCCCCEEEEehhHHHHHHHHHHHHHhhc-ccC
Confidence 8 899999999999999999999999999999999999999 99999999 99999999999887 655
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=8.3e-69 Score=525.06 Aligned_cols=303 Identities=43% Similarity=0.752 Sum_probs=283.4
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 020226 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (329)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~ 101 (329)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|.|+.+|..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999997656678999999999999999999999999999999999985459999999999999999999999999
Q ss_pred HHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec----CCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
+|++++++|+|||+.++...|+..+++.++||+.++++..+...+.. .+...++.++|+|||++|+|||||++..+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999998646999999999999999988776554432 22356889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999999
Q ss_pred hh-cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhccc
Q 020226 258 AA-TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKL 328 (329)
Q Consensus 258 ~a-~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~v 328 (329)
++ + ++||+++|||||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G---Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~-~v 351 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKG---ENCIAAGRLFVEESIHNQFVQKVVEEVEKM-KI 351 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCEEEEEEEHHHHHHHHHHHHHHHTTC-CB
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCC---CCCcCCeEEEEeHHHHHHHHHHHHHHHHhc-CC
Confidence 98 7 899999999999999999999999999999999999999 99999999 99999999999887 66
Q ss_pred C
Q 020226 329 G 329 (329)
Q Consensus 329 g 329 (329)
|
T Consensus 352 G 352 (517)
T 2o2p_A 352 G 352 (517)
T ss_dssp S
T ss_pred C
Confidence 5
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.6e-68 Score=521.26 Aligned_cols=305 Identities=35% Similarity=0.573 Sum_probs=284.8
Q ss_pred CCCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 020226 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (329)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~ 95 (329)
+..+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++
T Consensus 20 ~~~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 96 (498)
T 4f3x_A 20 FQSMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADA 96 (498)
T ss_dssp ---CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHH
T ss_pred hhhccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 444556789999999987666 899999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchh
Q 020226 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (329)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~ 174 (329)
|++++++|++++++|+|||+.++...|+..+++.++||+..++++.+...+.. .+...++.++|+|||++|+|||||++
T Consensus 97 l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (498)
T 4f3x_A 97 IEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLM 176 (498)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHH
Confidence 99999999999999999999998337999999999999999988766554432 35667899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHH
Q 020226 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (329)
Q Consensus 175 ~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (329)
..+++++|||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 255 (498)
T 4f3x_A 177 MMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKV 255 (498)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999888899999999999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhc
Q 020226 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQ 326 (329)
Q Consensus 255 ~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~ 326 (329)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 256 ~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~- 330 (498)
T 4f3x_A 256 LAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAG---QDCTAACRIYAEAGIYEKLVADLTSAVSTI- 330 (498)
T ss_dssp HHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGG---CSTTCEEEEEEETTTHHHHHHHHHHHHTTC-
T ss_pred HHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCC---CCccCCceEEecHHHHHHHHHHHHHHHHhc-
Confidence 999998 899999999999999999999999999999999999999 99999999 99999999999887
Q ss_pred ccC
Q 020226 327 KLG 329 (329)
Q Consensus 327 ~vg 329 (329)
++|
T Consensus 331 ~vG 333 (498)
T 4f3x_A 331 RYN 333 (498)
T ss_dssp CCS
T ss_pred ccC
Confidence 655
No 10
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.1e-68 Score=519.08 Aligned_cols=304 Identities=33% Similarity=0.514 Sum_probs=282.5
Q ss_pred CCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 020226 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (329)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l 96 (329)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|
T Consensus 21 ~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (497)
T 3i44_A 21 SMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIY 98 (497)
T ss_dssp -CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHH
T ss_pred ccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHH
Confidence 344567899999999887788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeE-eecCeeEEeecCcCcchhh
Q 020226 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~ 175 (329)
+++.++|++++++|+|||+.+++..|+..+++.++|++...........+ ..+...++. ++|+|||++|+|||||++.
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (497)
T 3i44_A 99 EKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQ 177 (497)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHH
Confidence 99999999999999999999987569999999999999877654332221 113446788 9999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcc
Q 020226 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQK 327 (329)
Q Consensus 256 ~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~ 327 (329)
+.+++ ++||+++|+|||||+||++||| |.|++.+++++|.|+| |.|++++| |+|+++|+++++++ +
T Consensus 258 ~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~ 331 (497)
T 3i44_A 258 KNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSG---QSCNAPTRMLVEQAIYDKAIKTAKDIAEKT-Q 331 (497)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGG---CCTTCCCEEEEEGGGHHHHHHHHHHHHHHC-C
T ss_pred HHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCC---CCcccCCEEEEcHHHHHHHHHHHHHHHHhc-c
Confidence 99998 8999999999999999999999 9999999999999999 99999999 99999999999887 6
Q ss_pred cC
Q 020226 328 LG 329 (329)
Q Consensus 328 vg 329 (329)
+|
T Consensus 332 vG 333 (497)
T 3i44_A 332 VG 333 (497)
T ss_dssp BC
T ss_pred CC
Confidence 65
No 11
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-68 Score=522.71 Aligned_cols=302 Identities=41% Similarity=0.666 Sum_probs=286.0
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHH
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADLI 96 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~--~~g~w~~~~~~~R~~~l~~~a~~l 96 (329)
...++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| + .|+.++..+|.++|++++++|
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l 98 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLI 98 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHH
Confidence 456899999999887788999999999 99999999999999999999999999 7 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhh
Q 020226 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
++++++|++++++|+|||+.++. .|+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+..
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 177 (528)
T 3u4j_A 99 LARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFII 177 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHH
Confidence 99999999999999999999995 6999999999999999988776655544 455678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcc
Q 020226 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQK 327 (329)
Q Consensus 256 ~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~ 327 (329)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ +
T Consensus 258 ~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~ 332 (528)
T 3u4j_A 258 EIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAG---QCCISGSRLLVQEGIRDALMERLLDISRKV-A 332 (528)
T ss_dssp HHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCEEEEEEEGGGHHHHHHHHHHHHHHC-C
T ss_pred HHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCC---CCCcCCCEEEEechHHHHHHHHHHHHHHhh-c
Confidence 99998 899999999999999999999999999999999999999 99999999 99999999999887 5
Q ss_pred cC
Q 020226 328 LG 329 (329)
Q Consensus 328 vg 329 (329)
+|
T Consensus 333 ~G 334 (528)
T 3u4j_A 333 FG 334 (528)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.9e-68 Score=518.74 Aligned_cols=300 Identities=35% Similarity=0.580 Sum_probs=282.7
Q ss_pred ccceeecCeeeeCCCCCe-EEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 21 FTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~-~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
..++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 456899999998766778 99999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHH
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 179 (329)
+++|++++++|+|||+.++. .|+..+++.++||+.++++..++..+...+...++.++|+|||++|+|||||++..+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 99999999999999999987 59999999999999999887665544333345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhh
Q 020226 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (329)
Q Consensus 180 ~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a 259 (329)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+ ++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 254 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977 89999999999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 255 ~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 327 (503)
T 1a4s_A 255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQG---QVCTNGTRVFVQREIMPQFLEEVVKRTKAI-VVG 327 (503)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGG---CCTTCCCEEEEEGGGHHHHHHHHHHHHHTC-CBS
T ss_pred h-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCC---CCCcCCcEEEEehHHHHHHHHHHHHHHHhc-CCC
Confidence 8 899999999999999999999999999999999999999 99999999 99999999999887 554
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2e-68 Score=521.10 Aligned_cols=305 Identities=35% Similarity=0.556 Sum_probs=288.3
Q ss_pred CCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 020226 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (329)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l 96 (329)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 345667899999999887788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhh
Q 020226 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
++++++|++++++|+|||+.++. .|+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||++.
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 99999999999999999999988 5999999999999999988777655542 355678899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcc
Q 020226 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQK 327 (329)
Q Consensus 256 ~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~ 327 (329)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ +
T Consensus 245 ~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~ 319 (497)
T 3k2w_A 245 KTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCG---QVCTCVERLYVHASVYDEFMAKFLPLVKGL-K 319 (497)
T ss_dssp HHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGG---CSTTSEEEEEEETTTHHHHHHHHHHHHHTC-C
T ss_pred HHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCC---CCCcCCcEEEEeHHHHHHHHHHHHHHHHhc-c
Confidence 99998 899999999999999999999999999999999999999 99999999 99999999999887 5
Q ss_pred cC
Q 020226 328 LG 329 (329)
Q Consensus 328 vg 329 (329)
+|
T Consensus 320 vg 321 (497)
T 3k2w_A 320 VG 321 (497)
T ss_dssp BS
T ss_pred CC
Confidence 54
No 14
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5.6e-68 Score=517.91 Aligned_cols=307 Identities=41% Similarity=0.678 Sum_probs=290.6
Q ss_pred CCCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 020226 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (329)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~ 95 (329)
|+++..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 1 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 78 (490)
T 2ve5_A 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDI 78 (490)
T ss_dssp -CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHH
T ss_pred CCccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 4677788999999999887788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhh
Q 020226 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.+...+...+...++.++|+|||++|+|||||+..
T Consensus 79 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~ 158 (490)
T 2ve5_A 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHH
Confidence 99999999999999999999998745999999999999999988776666655566778999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHh-hcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhc
Q 020226 256 QAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQ 326 (329)
Q Consensus 256 ~~~-a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~ 326 (329)
+.+ +. ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++
T Consensus 239 ~~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~- 313 (490)
T 2ve5_A 239 ASASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSG---QVCTNGTRVFIHRSQQARFEAKVLERVQRI- 313 (490)
T ss_dssp HHHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCCCEEEEEGGGHHHHHHHHHHHHHTC-
T ss_pred Hhchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCC---CCccCCCeEEEcHHHHHHHHHHHHHHHHhc-
Confidence 999 77 899999999999999999999999999999999999999 99999999 99999999999887
Q ss_pred ccC
Q 020226 327 KLG 329 (329)
Q Consensus 327 ~vg 329 (329)
++|
T Consensus 314 ~~g 316 (490)
T 2ve5_A 314 RLG 316 (490)
T ss_dssp CBS
T ss_pred cCC
Confidence 554
No 15
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=6.9e-68 Score=517.96 Aligned_cols=305 Identities=43% Similarity=0.691 Sum_probs=284.8
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 020226 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADL 95 (329)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g---~w~~~~~~~R~~~l~~~a~~ 95 (329)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.+ .|+.++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 345689999999988778899999999999999999999999999999999999732 69999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCcee-ee--c-CCccceeEeecCeeEEeecCcCc
Q 020226 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--S-RALQGYTLREPIGVVGHIIPWNF 171 (329)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~--~-~~~~~~~~~~P~GVv~~i~p~n~ 171 (329)
|++++++|++++++|+|||+.++. .|+..+++.++||+.+++++.+... +. . .+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 999999999999999999999987 5999999999999999887665431 21 1 34567899999999999999999
Q ss_pred chhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHH
Q 020226 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (329)
Q Consensus 172 P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (329)
|++..+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999878899999999999999999999999
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHH
Q 020226 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWS 323 (329)
Q Consensus 252 ~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~ 323 (329)
+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~ 319 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNG---QICSATSRLILHESIATEFLNRIVKWIK 319 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGG---CCTTCEEEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCC---CCcccCCeeEEcHHHHHHHHHHHHHHHH
Confidence 999999998 899999999999999999999999999999999999999 99999999 999999999998
Q ss_pred hhcccC
Q 020226 324 KRQKLG 329 (329)
Q Consensus 324 ~~~~vg 329 (329)
++ ++|
T Consensus 320 ~~-~~g 324 (503)
T 3iwj_A 320 NI-KIS 324 (503)
T ss_dssp TC-CBS
T ss_pred hc-cCC
Confidence 87 554
No 16
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.3e-68 Score=520.82 Aligned_cols=300 Identities=36% Similarity=0.588 Sum_probs=284.7
Q ss_pred CccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 020226 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (329)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~ 97 (329)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 34457899999999877888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhh----hcCceeeecCCccceeEeecCeeEEeecCcCcch
Q 020226 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (329)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 173 (329)
+++++|++++++|+|||+.++ |+..+++.++|++.++++ +.++..+...+. .++.++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999986 899999999999999887 667666544455 889999999999999999999
Q ss_pred hhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHH
Q 020226 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (329)
Q Consensus 174 ~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (329)
+..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+|+.|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7889999999999999999999999999
Q ss_pred HHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhh
Q 020226 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKR 325 (329)
Q Consensus 254 i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~ 325 (329)
|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 244 i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 319 (517)
T 3r31_A 244 VAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSG---QVCSNGTRVFVQKKAKARFLENLKRRTEAM 319 (517)
T ss_dssp HHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCH---HHHTTCEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred HHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCC---ceeccCceEEEeHHHHHHHHHHHHHHHHhc
Confidence 9999998 899999999999999999999999999999999999999 99999999 99999999999887
Q ss_pred cccC
Q 020226 326 QKLG 329 (329)
Q Consensus 326 ~~vg 329 (329)
++|
T Consensus 320 -~~G 322 (517)
T 3r31_A 320 -ILG 322 (517)
T ss_dssp -CBC
T ss_pred -cCC
Confidence 554
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=7.6e-68 Score=518.75 Aligned_cols=300 Identities=40% Similarity=0.624 Sum_probs=283.6
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 020226 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (329)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~ 101 (329)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876678899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeee-cCCccceeEeecCeeEEeecCcCcchhhhHHHH
Q 020226 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (329)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 180 (329)
+|++++++|+|||+.++. .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||++..++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999988 699999999999999988877765554 234556889999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhc
Q 020226 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (329)
Q Consensus 181 ~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~ 260 (329)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999998
Q ss_pred CCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~g 335 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNG---ERCTASSRLLVEEKIFEDFVGKVVERARAI-RVG 335 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCCCEEEEEHHHHHHHHHHHHHHHHHC-CBC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCC---CCCCCCeEEEEehhHHHHHHHHHHHHHhhc-ccC
Confidence 899999999999999999999999999999999999999 99999999 99999999999887 654
No 18
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.5e-68 Score=519.18 Aligned_cols=305 Identities=29% Similarity=0.429 Sum_probs=282.9
Q ss_pred CCCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 020226 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (329)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~ 95 (329)
..+|...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++
T Consensus 21 ~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 98 (521)
T 4e4g_A 21 QSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQL 98 (521)
T ss_dssp ---CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred hhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 3446677899999999887788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeee-cCCccceeEeecCeeEEeecCcCcchh
Q 020226 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTT 174 (329)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~ 174 (329)
|++++++|++++++|+|||+.++. .|+..+++.++||+.....+.+...+. ..+...++.++|+|||++|+|||||++
T Consensus 99 l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 177 (521)
T 4e4g_A 99 LNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGM 177 (521)
T ss_dssp HHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHH
Confidence 999999999999999999999987 599999999999998877666654432 234567899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHH
Q 020226 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (329)
Q Consensus 175 ~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (329)
..++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++| +.+.++.|+.||+|+.|+||||+.+|+.|
T Consensus 178 ~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i 256 (521)
T 4e4g_A 178 IPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYV 256 (521)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 45677999999999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh---------HHHHHHHHHHHHhh
Q 020226 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR---------KEFMMNLKRSWSKR 325 (329)
Q Consensus 255 ~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r---------d~f~~~l~~~~~~~ 325 (329)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 257 ~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G---Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~ 332 (521)
T 4e4g_A 257 YGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAG---ERCMAISVAVPVGEETANRLIDKLVPMVESL 332 (521)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTSEEEEEEBSHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCC---CCcccCeEEEEeCchHHHHHHHHHHHHHHhc
Confidence 999998 899999999999999999999999999999999999999 99999998 78999999998887
Q ss_pred cccC
Q 020226 326 QKLG 329 (329)
Q Consensus 326 ~~vg 329 (329)
++|
T Consensus 333 -~vG 335 (521)
T 4e4g_A 333 -RIG 335 (521)
T ss_dssp -CBC
T ss_pred -cCC
Confidence 554
No 19
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=9e-68 Score=516.17 Aligned_cols=303 Identities=52% Similarity=0.804 Sum_probs=283.2
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 020226 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (329)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g-~w~~~~~~~R~~~l~~~a~~l~~~~ 100 (329)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.| .|+.++..+|.++|+++++.|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999987667889999999999999999999999999999999999731 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHH
Q 020226 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (329)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 180 (329)
++|++++++|+|||+.++...|+..+++.++||++.+++..+...+...+...++.++|+|||++|+|||||++..++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999998765799999999999999988877665444334556889999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhh-
Q 020226 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA- 259 (329)
Q Consensus 181 ~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a- 259 (329)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999977789999999999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 260 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 332 (500)
T 1o04_A 260 S-NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG---QCSCAGSRTFVQEDIYDEFVERSVARAKSR-VVG 332 (500)
T ss_dssp T-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCEEEEEEEHHHHHHHHHHHHHHHHHC-CBC
T ss_pred h-cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCC---CCCCCCCEEEEehhHHHHHHHHHHHHHHhC-cCC
Confidence 6 899999999999999999999999999999999999999 99999999 99999999999887 554
No 20
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.1e-67 Score=516.21 Aligned_cols=299 Identities=31% Similarity=0.515 Sum_probs=281.8
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 020226 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~ 100 (329)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecC------CccceeEeecCeeEEeecCcCcchh
Q 020226 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR------ALQGYTLREPIGVVGHIIPWNFPTT 174 (329)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~------~~~~~~~~~P~GVv~~i~p~n~P~~ 174 (329)
++|++++++|+|||+.++. .|+..+++.++|++..+++..++..+... +...++.++|+|||++|+|||||++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 9999999999999999988 49999999999999999887766554331 3456889999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHH
Q 020226 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (329)
Q Consensus 175 ~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (329)
..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999878999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhc
Q 020226 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQ 326 (329)
Q Consensus 255 ~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~ 326 (329)
++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~- 320 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSG---QRCTAIKRVFVQDSVADQLVANIKELVEQL- 320 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGG---CCSSSEEEEEEEHHHHHHHHHHHHHHHHHC-
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCC---CccccCceEEEeHHHHHHHHHHHHHHHHhc-
Confidence 99886 79999999999999999999999999999999999999 99999999 99999999999887
Q ss_pred ccC
Q 020226 327 KLG 329 (329)
Q Consensus 327 ~vg 329 (329)
++|
T Consensus 321 ~~g 323 (505)
T 3prl_A 321 TVG 323 (505)
T ss_dssp CBS
T ss_pred ccC
Confidence 554
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.9e-68 Score=515.25 Aligned_cols=305 Identities=31% Similarity=0.515 Sum_probs=285.1
Q ss_pred CCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 020226 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (329)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l 96 (329)
++....++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|
T Consensus 2 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (479)
T 2imp_A 2 SVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGI 79 (479)
T ss_dssp -CCEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 344566789999999876678899999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhh
Q 020226 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
++++++|++++++|+|||+.++. .|+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||++.
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 158 (479)
T 2imp_A 80 RERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFL 158 (479)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHH
Confidence 99999999999999999999987 6999999999999998877766654432 234568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcc
Q 020226 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQK 327 (329)
Q Consensus 256 ~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~ 327 (329)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ +
T Consensus 239 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~G---Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~-~ 313 (479)
T 2imp_A 239 ATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSG---QVCNCAERVYVQKGIYDQFVNRLGEAMQAV-Q 313 (479)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTT---CCSSSCSEEEEEGGGHHHHHHHHHHHHHTC-C
T ss_pred HHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCC---CcCcCCcEEEEehhhHHHHHHHHHHHHHhc-c
Confidence 99997 899999999999999999999999999999999999999 99999999 99999999999887 5
Q ss_pred cC
Q 020226 328 LG 329 (329)
Q Consensus 328 vg 329 (329)
+|
T Consensus 314 ~g 315 (479)
T 2imp_A 314 FG 315 (479)
T ss_dssp BS
T ss_pred cC
Confidence 54
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.2e-67 Score=514.62 Aligned_cols=308 Identities=36% Similarity=0.565 Sum_probs=282.4
Q ss_pred cccCCCccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 020226 13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKF 92 (329)
Q Consensus 13 ~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~ 92 (329)
.++...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++
T Consensus 15 ~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~ 91 (495)
T 1wnd_A 15 LYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKL 91 (495)
T ss_dssp -------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred ccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Confidence 34444444567899999997655 7899999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCc
Q 020226 93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNF 171 (329)
Q Consensus 93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~ 171 (329)
++.|++++++|++++++|+|||+.++...|+..+++.++|++..+++..++..+.. .+...++.++|+|||++|+||||
T Consensus 92 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 171 (495)
T 1wnd_A 92 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNY 171 (495)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcc
Confidence 99999999999999999999999998744999999999999999887766554433 23456889999999999999999
Q ss_pred chhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHH
Q 020226 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (329)
Q Consensus 172 P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (329)
|++..++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|+.|+||||+.+|
T Consensus 172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 172 PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999 99999999999777899999999999999999999999
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHH
Q 020226 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWS 323 (329)
Q Consensus 252 ~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~ 323 (329)
+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++
T Consensus 251 ~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~ 326 (495)
T 1wnd_A 251 EHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG---QDCTAACRIYAQKGIYDTLVEKLGAAVA 326 (495)
T ss_dssp HHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGG---CSTTCCCEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCC---CCCCCCcEEEecchhHHHHHHHHHHHHH
Confidence 999999998 899999999999999999999999999999999999999 99999999 999999999998
Q ss_pred hhcccC
Q 020226 324 KRQKLG 329 (329)
Q Consensus 324 ~~~~vg 329 (329)
++ ++|
T Consensus 327 ~~-~~g 331 (495)
T 1wnd_A 327 TL-KSG 331 (495)
T ss_dssp TC-CBC
T ss_pred hc-cCC
Confidence 87 554
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.7e-67 Score=518.06 Aligned_cols=300 Identities=29% Similarity=0.449 Sum_probs=282.9
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~ 98 (329)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 111 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR 111 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence 3568899999997 567899999999 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHh-hhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
++++|++++++|+|||+.++.. |+..+++.++||+.. .+...++..+...+...++.++|+|||++|+|||||++..+
T Consensus 112 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 112 RKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 9999999999999999999985 999999999999998 55566655554445667899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhcCC------CccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHH
Q 020226 258 AATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWS 323 (329)
Q Consensus 258 ~a~~~------~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~ 323 (329)
+++ + +||+++|||||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++
T Consensus 271 aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~ 346 (538)
T 3qan_A 271 AAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSG---QKCSAGSRAVIHKDVYDEVLEKTVALAK 346 (538)
T ss_dssp HTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCCCEEEEETTTHHHHHHHHHHHHT
T ss_pred hhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCC---CCCccCceeEEehHHHHHHHHHHHHHHH
Confidence 987 6 99999999999999999999999999999999999999 99999999 999999999998
Q ss_pred hhcccC
Q 020226 324 KRQKLG 329 (329)
Q Consensus 324 ~~~~vg 329 (329)
++ ++|
T Consensus 347 ~~-~vG 351 (538)
T 3qan_A 347 NL-TVG 351 (538)
T ss_dssp TC-CBS
T ss_pred hc-cCC
Confidence 87 554
No 24
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.5e-67 Score=513.61 Aligned_cols=303 Identities=38% Similarity=0.641 Sum_probs=285.5
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 020226 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (329)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~ 98 (329)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 7 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 84 (481)
T 3jz4_A 7 LFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMME 84 (481)
T ss_dssp GCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CcccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3455789999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
++++|++++++|+|||+.++. .|+..+++.++|++....+..+...+.. .+...++.++|+|||++|+|||||++..+
T Consensus 85 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 163 (481)
T 3jz4_A 85 HQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMIT 163 (481)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHH
Confidence 999999999999999999987 5999999999999998877666554432 34567889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~ 243 (481)
T 3jz4_A 164 RKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQ 243 (481)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 258 ~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 244 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 318 (481)
T 3jz4_A 244 CAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAG---QTCVCANRLYVQDGVYDRFAEKLQQAMSKL-HIG 318 (481)
T ss_dssp HTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTSEEEEEEEGGGHHHHHHHHHHHHTTC-CBS
T ss_pred Hhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCC---CcccCCcEEEEeHHHHHHHHHHHHHHHHhc-cCC
Confidence 998 899999999999999999999999999999999999999 99999999 99999999999887 554
No 25
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9e-67 Score=508.78 Aligned_cols=303 Identities=26% Similarity=0.425 Sum_probs=281.4
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 020226 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (329)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~ 98 (329)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHE 81 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec--CCccceeEeecCeeEEeecCcCcchhhh
Q 020226 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (329)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 176 (329)
++++|++++++|+|||+.++.. |+..+++.++|++...+.+.+...+.. .+...++.++|+|||++|+|||||++..
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 160 (485)
T 4dng_A 82 NRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLS 160 (485)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHH
Confidence 9999999999999999999985 999999999999999887766655432 3456789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 177 ~~~~~~AL~aGN~Vvlkps~~~p~~~-~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
++++++||++||+||+|||+.+|+++ .++++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 161 ~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~ 240 (485)
T 4dng_A 161 MRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG 240 (485)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997777999999999999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcc
Q 020226 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQK 327 (329)
Q Consensus 256 ~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~ 327 (329)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ +
T Consensus 241 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~ 315 (485)
T 4dng_A 241 EIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQG---QICMIINRIIVHQDVYDEFVEKFTARVKQL-P 315 (485)
T ss_dssp HHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC-------CCEEEEEEEHHHHHHHHHHHHHHHHHC-C
T ss_pred HHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCC---CccccCCEEEEeHHHHHHHHHHHHHHHHhc-c
Confidence 99988 899999999999999999999999999999999999999 99999999 99999999999887 5
Q ss_pred cC
Q 020226 328 LG 329 (329)
Q Consensus 328 vg 329 (329)
+|
T Consensus 316 ~g 317 (485)
T 4dng_A 316 YG 317 (485)
T ss_dssp BS
T ss_pred CC
Confidence 54
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=9.4e-67 Score=508.11 Aligned_cols=298 Identities=36% Similarity=0.606 Sum_probs=280.2
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 020226 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (329)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~ 101 (329)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999753 6899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhhhHHHH
Q 020226 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (329)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 180 (329)
+|++++++|+|||+.++. .|+..+++.++|++..+++..++..+.. .+...++.++|+|||++|+|||||++..++++
T Consensus 89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 999999999999999988 4999999999999999888766654432 34556889999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 181 ~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++ |.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8667889999999999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHh-hccc
Q 020226 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSK-RQKL 328 (329)
Q Consensus 258 ~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~-~~~v 328 (329)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.+++++ + ++
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-~~ 322 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTG---QTCVCSNQFLVQRGIHDAFVKAFAEAMKKNL-RV 322 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCS---CCCSEEEEEEEEHHHHHHHHHHHHHHHHHHC-CB
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCC---CccccCCEEEEcccHHHHHHHHHHHHHHhhc-cc
Confidence 997 899999999999999999999999999999999999999 99999999 9999999999988 6 55
Q ss_pred C
Q 020226 329 G 329 (329)
Q Consensus 329 g 329 (329)
|
T Consensus 323 G 323 (487)
T 2w8n_A 323 G 323 (487)
T ss_dssp S
T ss_pred C
Confidence 4
No 27
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-66 Score=506.52 Aligned_cols=301 Identities=31% Similarity=0.507 Sum_probs=280.9
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 81 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQH 81 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999876678899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceee-ecCCccceeEeecCeeEEeecCcCcchhhhHH
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 178 (329)
+++|++++++|+|||+.++. .|+..+++.++|++...+...++..+ ...+...++.++|+|||++|+|||||+...++
T Consensus 82 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 160 (486)
T 1t90_A 82 KEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCW 160 (486)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHH
Confidence 99999999999999999987 69999999999999777666665443 22344568899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHh
Q 020226 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (329)
Q Consensus 179 ~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (329)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 161 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~a 239 (486)
T 1t90_A 161 MFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKG 239 (486)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 667899999999999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 259 a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 240 a~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvv~v~~~~d~f~~~l~~~~~~~-~vG 313 (486)
T 1t90_A 240 SE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAG---ERCMACAVVTVEEGIADEFMAKLQEKVADI-KIG 313 (486)
T ss_dssp HH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCEEEEEEEHHHHHHHHHHHHHHHTTC-CBS
T ss_pred hc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCC---CCcccCCeeEEecCCHHHHHHHHHHHHHhc-ccC
Confidence 88 899999999999999999999999999999999999999 99999999 89999999999887 554
No 28
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.3e-66 Score=504.50 Aligned_cols=298 Identities=28% Similarity=0.453 Sum_probs=278.0
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
+++++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 3457899999997643 899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CC----ccc-eeEeecCeeEEeecCcCcch
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT 173 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~ 173 (329)
+++|++++++|+|||+.++. .|+..+++.++|++..+++..++..+.. .+ ... ++.++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 99999999999999999987 5999999999999998887666554432 23 345 88999999999999999999
Q ss_pred hhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHH
Q 020226 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (329)
Q Consensus 174 ~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (329)
+..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999976778999999999999999999999999
Q ss_pred HHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhh
Q 020226 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKR 325 (329)
Q Consensus 254 i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~ 325 (329)
|++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~G---Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 311 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSG---QRCTAVKRVLVMESVADELVEKIREKVLAL 311 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CCSSSEEEEEEEHHHHHHHHHHHHHHHHTS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCC---CcCCCCcEEEEehhHHHHHHHHHHHHHHhc
Confidence 999886 78999999999999999999999999999999999999 99999999 99999999999887
Q ss_pred cccC
Q 020226 326 QKLG 329 (329)
Q Consensus 326 ~~vg 329 (329)
++|
T Consensus 312 -~~g 314 (475)
T 1euh_A 312 -TIG 314 (475)
T ss_dssp -CBS
T ss_pred -cCC
Confidence 554
No 29
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.9e-66 Score=509.20 Aligned_cols=299 Identities=28% Similarity=0.449 Sum_probs=279.8
Q ss_pred ccceeecCeeeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4578999999963 5689999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceee--ecCCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
+++|++++++|+|||+.++. .|+..+++.++||+..++++.+...+ ...+...++.++|+|||++|+|||||++..+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 99999999999999999987 59999999999999998887765432 1123456889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999778899999999999999999999999999999
Q ss_pred hh------cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHH
Q 020226 258 AA------TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWS 323 (329)
Q Consensus 258 ~a------~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~ 323 (329)
++ + ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++
T Consensus 272 aa~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~ 347 (516)
T 1uzb_A 272 AGRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQG---QKCSAASRLILTQGAYEPVLERVLKRAE 347 (516)
T ss_dssp HTSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred hhhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCC---CccccCcEEEEchHHHHHHHHHHHHHHH
Confidence 98 5 799999999999999999999999999999999999999 99999999 999999999998
Q ss_pred hhcccC
Q 020226 324 KRQKLG 329 (329)
Q Consensus 324 ~~~~vg 329 (329)
++ ++|
T Consensus 348 ~~-~~G 352 (516)
T 1uzb_A 348 RL-SVG 352 (516)
T ss_dssp TC-CBS
T ss_pred hc-cCC
Confidence 87 554
No 30
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-66 Score=507.37 Aligned_cols=301 Identities=36% Similarity=0.535 Sum_probs=282.3
Q ss_pred CccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 020226 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (329)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~ 97 (329)
|+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 4 m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 81 (478)
T 3ty7_A 4 MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYE 81 (478)
T ss_dssp CEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 44567899999999987888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
+++++|++++++|+|||+.++...|+..+++.++|+++.+.+..+... ....++.++|+|||++|+|||||++..+
T Consensus 82 ~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 157 (478)
T 3ty7_A 82 NRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTS 157 (478)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHH
Confidence 999999999999999999998457999999999999998887665432 2356789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|.+.
T Consensus 158 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~ 237 (478)
T 3ty7_A 158 LKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEK 237 (478)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CS
T ss_pred HHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 258 ~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 238 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~g 312 (478)
T 3ty7_A 238 AAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTG---QVCTAGTRVLVPNKIKDAFLAELKEQFSQV-RVG 312 (478)
T ss_dssp TTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCCCEEEEETTTHHHHHHHHHHHHHTC-CBS
T ss_pred HHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCC---CCccCCCeEEEcHHHHHHHHHHHHHHHHhc-cCC
Confidence 988 899999999999999999999999999999999999999 99999999 99999999999887 554
No 31
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.7e-66 Score=506.32 Aligned_cols=304 Identities=34% Similarity=0.538 Sum_probs=284.0
Q ss_pred CccccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 020226 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (329)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~ 97 (329)
.+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (508)
T 3r64_A 9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLE 86 (508)
T ss_dssp TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHH
Confidence 34556899999999877788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec--CCccceeEeecCeeEEeecCcCcchhh
Q 020226 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
+++++|++++++|+|||..++.. |+..+++.++|++...++..+ ..+.. .+...++.++|+|||++|+|||||++.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 87 EHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 99999999999999999999884 999999999999998877665 44432 245678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~-~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (329)
.++++++||++||+||+|||+.+|+++ .++++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999778899999999999999999999999999
Q ss_pred HHHhhcC-CCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhh
Q 020226 255 MQAAATS-NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKR 325 (329)
Q Consensus 255 ~~~~a~~-~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~ 325 (329)
++.++++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++
T Consensus 245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 321 (508)
T 3r64_A 245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQG---QICMSINRVIVDAAVHDEFLEKFVEAVKNI 321 (508)
T ss_dssp HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTT---CTTTCCSEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCC---CCcccCcEEEEehhHHHHHHHHHHHHHHhc
Confidence 9988742 589999999999999999999999999999999999999 99999999 89999999999887
Q ss_pred cccC
Q 020226 326 QKLG 329 (329)
Q Consensus 326 ~~vg 329 (329)
++|
T Consensus 322 -~~G 324 (508)
T 3r64_A 322 -PTG 324 (508)
T ss_dssp -CBS
T ss_pred -cCC
Confidence 554
No 32
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=4.3e-66 Score=502.75 Aligned_cols=292 Identities=29% Similarity=0.494 Sum_probs=269.8
Q ss_pred eeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 020226 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (329)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l 103 (329)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHH
Q 020226 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (329)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 183 (329)
++++++|+|||+.++. .|+..+++.++|++..++++.++..+.+ +...++.++|+|||++|+|||||++..++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999987 5999999999999999988766655543 5567899999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhh
Q 020226 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (329)
Q Consensus 184 L~aGN~Vvlkps~~~p~~~~~l~~~l~~a----GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a 259 (329)
|++||+||+|||+.+|+++.++++++.++ |+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999999875
Q ss_pred cCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~g 305 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAG---QVCISVGMILVDESIADKFIEMFVNKAKVL-NVG 305 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTSEEEEEEEGGGHHHHHHHHHHHHHTC-CBS
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCC---CCccCCcEEEEeHHHHHHHHHHHHHHHHhc-ccC
Confidence 79999999999999999999999999999999999999 99999999 99999999999887 554
No 33
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2e-65 Score=499.33 Aligned_cols=298 Identities=28% Similarity=0.405 Sum_probs=278.7
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 020226 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (329)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~ 101 (329)
.++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 82 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRAD 82 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999764 46789999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHHH
Q 020226 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (329)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~ 181 (329)
+|++++++|+|||+.++. .|+..+++.++|++...+...+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 83 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (490)
T 3ju8_A 83 ELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIV 161 (490)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHH
Confidence 999999999999999987 5999999999999998877776655433344556789999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcC
Q 020226 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (329)
Q Consensus 182 ~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 261 (329)
+||++||+||+|||+.+|+++.++++++.++|+|+|++|+++| +.+.++.|+.||+|+.|+||||+.+|+.|++.+++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~- 239 (490)
T 3ju8_A 162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG- 239 (490)
T ss_dssp HHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-
T ss_pred HHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999999999999999 67899999999999999999999999999999988
Q ss_pred CCccE-EEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh---------HHHHHHHHHHHHhhcccC
Q 020226 262 NLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR---------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 262 ~~~~~-~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r---------d~f~~~l~~~~~~~~~vg 329 (329)
+++|+ ++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 240 ~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~-~~G 313 (490)
T 3ju8_A 240 QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAG---QRCTCARRLLVPQGAWGDALLARLVAVSATL-RVG 313 (490)
T ss_dssp CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGG---CSTTSEEEEEEESSHHHHHHHHHHHHHHHHC-CBC
T ss_pred cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCC---CCCcCCCEEEEECCccHHHHHHHHHHHHHhc-cCC
Confidence 88998 7999999999999999999999999999999999 99999998 88999999999887 655
No 34
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.3e-65 Score=501.49 Aligned_cols=299 Identities=26% Similarity=0.422 Sum_probs=278.2
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
..++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3578999999994 567899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec-CCccceeEeecCeeEEeecCcCcchhhhHH
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 178 (329)
+++|++++++|+|||+.++. .|+..+++.++|++..++++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999986 6999999999999998877766554432 233457889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHH
Q 020226 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (329)
Q Consensus 179 ~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~----~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (329)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+++| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999888765 56999999999999 78899999999999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhc
Q 020226 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQ 326 (329)
Q Consensus 255 ~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~ 326 (329)
++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~- 330 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAG---QRCTTARRLFIHESIHDEVVNRLKKAYAQI- 330 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGG---CSTTCEEEEEEETTTHHHHHHHHHHHHHTC-
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCC---CCcCCCcEEEEcHHHHHHHHHHHHHHhhhc-
Confidence 999998 899999999999999999999999999999999999999 99999999 99999999999887
Q ss_pred ccC
Q 020226 327 KLG 329 (329)
Q Consensus 327 ~vg 329 (329)
++|
T Consensus 331 ~~G 333 (500)
T 2j6l_A 331 RVG 333 (500)
T ss_dssp CBS
T ss_pred ccC
Confidence 554
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.6e-65 Score=500.71 Aligned_cols=297 Identities=27% Similarity=0.400 Sum_probs=277.2
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 020226 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~ 100 (329)
.+++||||+|+.+. .+++++||+||+++++++.++.+|+++|+++|++||+. .|+.+|..+|.++|+++++.|++++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999763 68999999999999999999999999999999999972 3999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeec---C--CccceeEeecCeeEEeecCcCcchhh
Q 020226 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
++|++++++|+|||+.++. .|+..+++.++||+..+++..++..+.. . +...++.++|+|||++|+|||||++.
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999988 6999999999999999888766655532 2 23568999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+|++|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999976 8899999999999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcc
Q 020226 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQK 327 (329)
Q Consensus 256 ~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~ 327 (329)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ +
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~ 325 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAG---QRCDAIKLVLAERPVYGKLVEEVAKRLSSL-R 325 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCEEEEEEEHHHHHHHHHHHHHHHHTC-C
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCC---CCCcCCcEEEeccchHHHHHHHHHHHHHhc-c
Confidence 9886 79999999999999999999999999999999999999 99999999 99999999999887 5
Q ss_pred cC
Q 020226 328 LG 329 (329)
Q Consensus 328 vg 329 (329)
+|
T Consensus 326 ~g 327 (501)
T 1uxt_A 326 VG 327 (501)
T ss_dssp BS
T ss_pred CC
Confidence 54
No 36
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=7.7e-65 Score=493.68 Aligned_cols=283 Identities=28% Similarity=0.409 Sum_probs=270.1
Q ss_pred eEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHHH
Q 020226 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (329)
Q Consensus 38 ~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (329)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 488999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCC
Q 020226 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (329)
Q Consensus 118 a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~ 197 (329)
+. .|+..+++.++|++..+++..+...+...+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 69999999999999999888776655444567789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCcee
Q 020226 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (329)
Q Consensus 198 ~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~i 277 (329)
+|+++..+++++.++|+|+|++|+++|++.++++ |+.||+|+.|+||||+.+|+.|++.+++ ++||+++|+|||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999997777888 9999999999999999999999999998 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 278 IFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 278 V~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
|++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 295 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDG---QVCTSSKRIIVEKSRYDEVLHELKNVFSNL-KAG 295 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGG---CCTTSCCEEEEEGGGHHHHHHHHHHHHHTC-CBS
T ss_pred eCCCCCHHHHHHHHHHHHhcCCC---CCccCCceEEEcHHHHHHHHHHHHHHHHhc-cCC
Confidence 99999999999999999999999 99999999 99999999999887 554
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.9e-65 Score=503.53 Aligned_cols=301 Identities=23% Similarity=0.282 Sum_probs=276.2
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 020226 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (329)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~ 97 (329)
...+++||||+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|+++|++++++|+
T Consensus 61 ~~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~ 136 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS 136 (563)
T ss_dssp CEECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 3467899999999753 3678899998 899999999999999999999999999 8999999999999999999999
Q ss_pred Hh-HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeee-cCCccceeEeecCeeEEeecCcCcchhh
Q 020226 98 EH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (329)
Q Consensus 98 ~~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (329)
++ +++|+.++++|+|||+.++..+++..+++.++|++..++++.+..... +.+...+.++.|+|||++|+|||||+..
T Consensus 137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence 98 999999999999999999875459999999999999998877643221 1223345667788999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHH
Q 020226 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (329)
Q Consensus 176 ~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (329)
..++++||| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|+.||+|++|+||||+.+|+.|+
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999 6999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhcCCCc------cEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHH
Q 020226 256 QAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRS 321 (329)
Q Consensus 256 ~~~a~~~~~------~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~ 321 (329)
+.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++
T Consensus 296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~G---Q~C~A~~rv~V~~si~d~f~~~l~~~ 371 (563)
T 4e3x_A 296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGG---QKCSACSRLYVPKSLWPQIKGRLLEE 371 (563)
T ss_dssp HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCC---CCCcCCcEEEEecchHHHHHHHHHHH
Confidence 99998 777 499999999999999999999999999999999999 99999999 9999999999
Q ss_pred HHhhcccC
Q 020226 322 WSKRQKLG 329 (329)
Q Consensus 322 ~~~~~~vg 329 (329)
++++ ++|
T Consensus 372 ~~~l-~vG 378 (563)
T 4e3x_A 372 HSRI-KVG 378 (563)
T ss_dssp HHTC-CBS
T ss_pred HHhc-cCC
Confidence 9987 665
No 38
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-63 Score=490.49 Aligned_cols=296 Identities=24% Similarity=0.300 Sum_probs=269.5
Q ss_pred CccccceeecCeeeeCCCCCeEEeecCCCCceEE-EEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 020226 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (329)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~-~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l 96 (329)
++...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEI 98 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 455678999999997532 89999999998 9999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhh--cCceee----e---cCCccceeEeecCeeEEeec
Q 020226 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHII 167 (329)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~~----~---~~~~~~~~~~~P~GVv~~i~ 167 (329)
++++++|++++++|+|||+.++. .|+..+++.++||+..+++. .+...+ . ..+...++.++|+|||++|+
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 177 (528)
T 3v4c_A 99 EARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG 177 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence 99999999999999999999987 59999999999999988762 222221 0 01234678999999999999
Q ss_pred CcCcchhhhH--HHHHHHHhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCCCE
Q 020226 168 PWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (329)
Q Consensus 168 p~n~P~~~~~--~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~ 241 (329)
|||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+|++
T Consensus 178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~ 257 (528)
T 3v4c_A 178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA 257 (528)
T ss_dssp CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence 9999999865 99999999999999999999999999998865 57899999999999988889999999999999
Q ss_pred EEEeCChHHHHHHHHHhhcCCC--ccEEEeCCCCCceeEcCCC---CHHHHHHHHHHHHhccCCCCCceEecCCh-----
Q 020226 242 VSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKKFVWQVLVFMSR----- 311 (329)
Q Consensus 242 v~ftGs~~~g~~i~~~~a~~~~--~~~~lelgG~~~~iV~~da---D~~~a~~~~~~~~~~~~G~~~Q~C~a~~r----- 311 (329)
|+||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |+|.|++.+++++|.|+| |.|++++|
T Consensus 258 V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~ 333 (528)
T 3v4c_A 258 VGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG---QFCTNPGIAVVIE 333 (528)
T ss_dssp EEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGG---CCTTCCCEEEEES
T ss_pred EEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCC---CccccCcEEEEec
Confidence 9999999999999999998 88 9999999999999999999 888999999999999999 99999999
Q ss_pred ----HHHHHHHHHHHHhh
Q 020226 312 ----KEFMMNLKRSWSKR 325 (329)
Q Consensus 312 ----d~f~~~l~~~~~~~ 325 (329)
|+|+++|+++++++
T Consensus 334 ~~i~d~f~~~l~~~~~~~ 351 (528)
T 3v4c_A 334 GADADRFTTAAVEALAKV 351 (528)
T ss_dssp SHHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHHHhc
Confidence 78999999888776
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1e-63 Score=517.79 Aligned_cols=301 Identities=30% Similarity=0.456 Sum_probs=282.7
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 020226 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (329)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~ 98 (329)
...++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||+ .|+.+|..+|+++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3567899999997 357899999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeee-cCCccceeEeecCeeEEeecCcCcchhhhH
Q 020226 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (329)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (329)
++++|++++++|+|||+.++. .|+..+++.++||+..++++.+...+. ..+..+++.++|+|||++|+|||||+...+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 999999999999999999987 599999999999999998877654443 345667889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Q 020226 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (329)
Q Consensus 178 ~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (329)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hhc-----CCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHh
Q 020226 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSK 324 (329)
Q Consensus 258 ~a~-----~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~ 324 (329)
++. +++||+++|+|||||+||++|||+|.|++.+++|+|.|+| |+|++++| |+|+++|++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aG---Q~C~A~~rl~V~~~i~d~f~~~L~~~~~~ 841 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQG---QKCSACSRVIVLDAVYDKFIERLVSMAKA 841 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGG---CSTTCEEEEEEEGGGHHHHHHHHHHHHHH
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCC---CCCCCCceEEecHHHHHHHHHHHHHHHHh
Confidence 883 3789999999999999999999999999999999999999 99999999 9999999999988
Q ss_pred hcccC
Q 020226 325 RQKLG 329 (329)
Q Consensus 325 ~~~vg 329 (329)
+ ++|
T Consensus 842 l-~vG 845 (1026)
T 4f9i_A 842 T-KVG 845 (1026)
T ss_dssp C-CBC
T ss_pred c-ccC
Confidence 7 665
No 40
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=9.4e-63 Score=477.95 Aligned_cols=286 Identities=25% Similarity=0.380 Sum_probs=268.2
Q ss_pred CCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 020226 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (329)
Q Consensus 35 ~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (329)
+..+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345789999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhhCCHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEec
Q 020226 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (329)
Q Consensus 115 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkp 194 (329)
+.+++ .|+..+++.++|++....+..+.......+...++.++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99988 59999999999999988877665522223456788999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCC
Q 020226 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (329)
Q Consensus 195 s~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~ 274 (329)
|+.+|+++.++++++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999999 56788999999999999999999999999999998 8999999999999
Q ss_pred ceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 275 PLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 275 ~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
|+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~G 298 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTG---QVCAAAKRFIVEEGIAQAFTDRFVAAAAAL-KMG 298 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGG---CCTTCEEEEEEEHHHHHHHHHHHHHHHHHC-CBS
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCC---CcccCCcEEEEehhHHHHHHHHHHHHHHhh-cCC
Confidence 99999999999999999999999999 99999999 99999999999887 554
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.2e-62 Score=484.44 Aligned_cols=295 Identities=22% Similarity=0.312 Sum_probs=265.7
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 020226 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a-~~~g~w~~~~~~~R~~~l~~~a~~l~~~ 99 (329)
..++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.+|..+|.++|++++++|+++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997644 479999999999999999988 9999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHHHhhhhhcCce-------eeecC-C-ccceeEeecC-eeEEeecCc
Q 020226 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-------LKMSR-A-LQGYTLREPI-GVVGHIIPW 169 (329)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-------~~~~~-~-~~~~~~~~P~-GVv~~i~p~ 169 (329)
+++|++++++|+|||+.++. .|+..+++.++||+..++++.+.. .+... + ...+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 99999999999999999987 499999999999999887664321 12211 1 2347889997 999999999
Q ss_pred CcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHhC-CCCCEEEEeCC
Q 020226 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGS 247 (329)
Q Consensus 170 n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aG-lP~g~v~~v~g~~~~~~~~l~~~-~~v~~v~ftGs 247 (329)
|||++..++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ +..+ +++++|+||||
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999999999999999999 799999999996543 3333 67999999999
Q ss_pred hHHHHHHHHHhh--cCCCccEEEeCCCCCceeEcCCC-----CHHHHHHHHHHHHhccCCCCCceEecCCh--------H
Q 020226 248 TDVGRQVMQAAA--TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKKFVWQVLVFMSR--------K 312 (329)
Q Consensus 248 ~~~g~~i~~~~a--~~~~~~~~lelgG~~~~iV~~da-----D~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d 312 (329)
+.+|+.|++.++ + ++||+++|+|||||+||++|| |+|.|++.+++++|.|+| |.|++++| |
T Consensus 238 ~~~G~~i~~~aa~a~-~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d 313 (534)
T 2y53_A 238 ADTAATLRAHPAFVQ-RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSG---QKCTAIRRAFVPEAALE 313 (534)
T ss_dssp HHHHHHHHTSHHHHT-TCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGG---CCTTSEEEEEEEGGGHH
T ss_pred HHHHHHHHHhhhhhc-CCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCC---CcccCCCEEEEeccHHH
Confidence 999999998774 5 899999999999999999999 999999999999999999 99999999 9
Q ss_pred HHHHHHHHHHHhhcccC
Q 020226 313 EFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 313 ~f~~~l~~~~~~~~~vg 329 (329)
+|+++|+++++++ ++|
T Consensus 314 ~f~~~l~~~~~~~-~vG 329 (534)
T 2y53_A 314 PVLEALKAKLAKI-TVG 329 (534)
T ss_dssp HHHHHHHHHHTTC-CBB
T ss_pred HHHHHHHHHHHhc-cCC
Confidence 9999999999887 654
No 42
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.1e-61 Score=475.04 Aligned_cols=286 Identities=23% Similarity=0.305 Sum_probs=260.7
Q ss_pred CCCCCeEEeecCCCCceE-EEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 020226 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (329)
Q Consensus 33 ~~~~~~~~v~~P~~g~~i-~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~ 111 (329)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 345678999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCcHHHHhhCCHHHHHHHHHHHHHhhhh--hcCceeee------cCC-ccceeEeecCeeEEeecCcCcchhhh--HHHH
Q 020226 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLKM------SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (329)
Q Consensus 112 Gk~~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~~~------~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~ 180 (329)
|||+.++. .|+..+++.++||+..+++ ..+...+. +.+ ...++.++|+|||++|+|||||++.. .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998886 5999999999999998875 33332211 111 13578999999999999999999985 4999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHH
Q 020226 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (329)
Q Consensus 181 ~~AL~aGN~Vvlkps~~~p~~~~~l~~~l----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (329)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999988 56899999999999977889999999999999999999999999999
Q ss_pred HhhcCCC--ccEEEeCCCCCceeEcCCCCHH--HHHHHHHHHHhccCCCCCceEecCCh---------HHHHHHHHHHHH
Q 020226 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKKFVWQVLVFMSR---------KEFMMNLKRSWS 323 (329)
Q Consensus 257 ~~a~~~~--~~~~lelgG~~~~iV~~daD~~--~a~~~~~~~~~~~~G~~~Q~C~a~~r---------d~f~~~l~~~~~ 323 (329)
.+++ ++ ||+++|+|||||+||++|||+| .|++.+++++|.|+| |.|++++| |+|+++|.++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~ 315 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCG---QFCTKPGVVFALNTPETQAFIETAQSLIR 315 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGG---CCTTCCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCC---CCcCCCCEEEEeCCccHHHHHHHHHHHHH
Confidence 9998 64 9999999999999999999999 999999999999999 99999998 789999999888
Q ss_pred hh
Q 020226 324 KR 325 (329)
Q Consensus 324 ~~ 325 (329)
++
T Consensus 316 ~~ 317 (510)
T 1ez0_A 316 QQ 317 (510)
T ss_dssp HC
T ss_pred hc
Confidence 76
No 43
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.3e-61 Score=471.04 Aligned_cols=284 Identities=29% Similarity=0.396 Sum_probs=261.8
Q ss_pred CCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 020226 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (329)
Q Consensus 34 ~~~~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk 113 (329)
...++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred cHHHHhhCCHHHHHHHHHHHHHhhhhhcCceeee-c-CCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEE
Q 020226 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-S-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (329)
Q Consensus 114 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vv 191 (329)
+... . .|+...++.++|++..+.+........ . .....+..++|+|||++|+|||||++..+++++|||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 9655 3 499999999999998887655443322 2 2344567889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCC
Q 020226 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (329)
Q Consensus 192 lkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelg 271 (329)
+|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|+.| ++.|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 67888899875 8999999999999999999998 8999999999
Q ss_pred CCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 272 GKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 272 G~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
||||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|.++++++ ++|
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~G---Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~-~~g 296 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTG---QSCLSIERIYVAESKFEEFYHQLIAKAHRL-QLA 296 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGG---CSTTCEEEEEEEGGGHHHHHHHHHHHHHHC-CBC
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCC---CceeecccccchHHHHHHHHHHHHHHhhcc-ccC
Confidence 99999999999999999999999999999 99999999 99999999998887 554
No 44
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.7e-60 Score=461.14 Aligned_cols=280 Identities=24% Similarity=0.358 Sum_probs=246.8
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHH
Q 020226 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (329)
Q Consensus 37 ~~~~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (329)
..++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhCCHHHHHHHHHHHHHhhhhhcCce-eeec---CCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEE
Q 020226 117 WAKMGDIPGAANTLRYYAGAADKIHGEV-LKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (329)
Q Consensus 117 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvl 192 (329)
++...|+..+++.++|++...++..+.. .+.. .+...++.++|+|||++|+|||||++..++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9875599999999999999887665432 2211 24567889999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCC
Q 020226 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (329)
Q Consensus 193 kps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG 272 (329)
|||+.+|+++.++++++.++ +|+|++|+++| +.+.++.|+. ++|+.|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 7788999998 799999999999999999999998 89999999999
Q ss_pred CCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhh
Q 020226 273 KSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKR 325 (329)
Q Consensus 273 ~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~ 325 (329)
|||+||++|||+|.|++.+++++|.|+| |.|++++| |+|+++|+++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 297 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSG---QTXIAPDYLYVHYSVKDALLERLVERVKTE 297 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGG---CCTTSEEEEEEEGGGHHHHHHHHHHHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCC---CCccCCceEEEcHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999 99999999 99999999998876
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3.5e-56 Score=431.59 Aligned_cols=262 Identities=27% Similarity=0.338 Sum_probs=236.9
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHHHH
Q 020226 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (329)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 134 (329)
..+.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467799999999999999 99999999999999999999999999999999999999999987679999999999988
Q ss_pred HhhhhhcCceee----ecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 020226 135 GAADKIHGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (329)
Q Consensus 135 ~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~ 210 (329)
............ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 766544332211 1123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHH
Q 020226 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (329)
Q Consensus 211 ~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~ 290 (329)
++ +|+|++|+++| +.+.+..|+.| +|+.|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.
T Consensus 172 ~a-lP~gvv~vv~g-~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCC-SHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEEC-CHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 99999999999 44556678887 89999999999999999999998 89999999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhh
Q 020226 291 ALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKR 325 (329)
Q Consensus 291 ~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~ 325 (329)
+++++|.|+| |.|++++| |+|+++|.++++++
T Consensus 248 i~~~~~~n~G---Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 287 (469)
T 3sza_A 248 IAWGKFMNSG---QTCVAPDYILCDPSIQNQIVEKLKKSLKEF 287 (469)
T ss_dssp HHHHHHGGGG---CCTTSCCEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC---CCCCCCcEEEEehhHHHHHHHHHHHHHHHh
Confidence 9999999999 99999999 99999999998876
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.2e-56 Score=463.98 Aligned_cols=269 Identities=30% Similarity=0.412 Sum_probs=253.4
Q ss_pred EeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHHH
Q 020226 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (329)
Q Consensus 53 ~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (329)
++.++.+|+++|+++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence 889999999999999999999 89999999999999999999999999999999999999999987 599999999999
Q ss_pred HHHhhhhhcCcee--eecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 020226 133 YAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (329)
Q Consensus 133 ~a~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~ 210 (329)
|+..+++..+... +...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 9999988766432 33345677899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcC--CCccEEEeCCCCCceeEcCCCCHHHHH
Q 020226 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (329)
Q Consensus 211 ~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~~~~lelgG~~~~iV~~daD~~~a~ 288 (329)
++|+|+|++|+++|++.+ +..|+.||+|++|+||||+.+|+.|.+.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999997777 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhcccC
Q 020226 289 DMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKLG 329 (329)
Q Consensus 289 ~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~vg 329 (329)
+.+++++|.|+| |.|++++| |+|+++|+++++++ ++|
T Consensus 780 ~~iv~s~f~naG---Q~C~A~~rllV~e~i~d~f~~~L~~~~~~l-~vG 824 (1001)
T 3haz_A 780 DDVVTSAFRSAG---QRCSALRLLFVQEDVADRMIEMVAGAAREL-KIG 824 (1001)
T ss_dssp HHHHHHHHGGGG---CSTTCEEEEEEEHHHHHHHHHHHHHHHHTC-CBS
T ss_pred HHHHHHHHhCCC---CCCCCCceeeccHHHHHHHHHHHHHHHHhc-CCC
Confidence 999999999999 99999999 99999999999887 655
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-56 Score=429.69 Aligned_cols=258 Identities=16% Similarity=0.139 Sum_probs=214.9
Q ss_pred EeecCCCCceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------C
Q 020226 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-------G 112 (329)
Q Consensus 40 ~v~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~-------G 112 (329)
.++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CcHHH----HhhCCHHHHHHHHHHHHHhhhhhcCceeeec---CCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHh
Q 020226 113 KLHSW----AKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185 (329)
Q Consensus 113 k~~~~----a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~ 185 (329)
||+.+ +. .|+..+++.++|++..+++..++..+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 99973 44 5999999999999998877776654422 2445688999999999999887 77776 89999999
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcC
Q 020226 186 AGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (329)
Q Consensus 186 aGN~Vvlkps~~~p~~~~~l~~~l~~a----GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 261 (329)
+||+||+|||+.+|+++..+++++.++ | |+|++|+++| +.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 7778999999999999999999999999999886
Q ss_pred CCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh
Q 020226 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR 311 (329)
Q Consensus 262 ~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r 311 (329)
+||+++|+|||||+||++|||+|.|++.+++++|.| | |.|++++|
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-G---Q~C~a~~r 285 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-P---AACNALET 285 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-T---TSTTSEEE
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-C---CccccCcE
Confidence 789999999999999999999999999999999999 9 99999999
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.7e-52 Score=404.65 Aligned_cols=256 Identities=19% Similarity=0.217 Sum_probs=219.9
Q ss_pred EeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHH-H
Q 020226 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (329)
Q Consensus 53 ~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 131 (329)
++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999999 8999999999999999999999999999999999999999987644666666666 3
Q ss_pred HHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH-
Q 020226 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (329)
Q Consensus 132 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~- 210 (329)
++.. .+..+ ..+.+.+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3332 11111 1222234456889999999999999999999999999999999999999999999999998888765
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHH
Q 020226 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (329)
Q Consensus 211 ---~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a 287 (329)
++|+|+|++|++++++.+.++.|+.||+|+.|+||||+.+++ .++. ++||+++|+|||||+||++|||+|.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998889999999999999999999998654 4454 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHH
Q 020226 288 ADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRS 321 (329)
Q Consensus 288 ~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~ 321 (329)
++.+++++|.|+| |.|++.+| |+|+++|+++
T Consensus 231 a~~iv~s~~~~~G---Q~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 231 VASVLMSKTFDNG---VVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp HHHHHHGGGGGGG---CCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCC---CccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 9999999999999 99999999 8888887754
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.9e-52 Score=404.24 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=221.7
Q ss_pred EEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHHHHhhCCHHHHHHHHH
Q 020226 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (329)
Q Consensus 52 ~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 131 (329)
.++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++...+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999 89999999999999999999999999999999999999988765333444444443
Q ss_pred HHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHH----
Q 020226 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH---- 207 (329)
Q Consensus 132 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~---- 207 (329)
++....+ ..+ ..+.+.+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332211 111 2222345667889999999999999999999999999999999999999999999999987654
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCC-CCCceeEcCCCCHHH
Q 020226 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT 286 (329)
Q Consensus 208 ~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelg-G~~~~iV~~daD~~~ 286 (329)
++.++|+|+|++|++++++.+.++.|+.||+|+.|+||||+.+ .+.++. ++||+ +|+| ||||+||++|||+|.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5689999999999999988899999999999999999999984 455555 88999 7888 999999999999999
Q ss_pred HHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHH
Q 020226 287 AADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSW 322 (329)
Q Consensus 287 a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~ 322 (329)
|++.+++++|.|+| |.|++.+| |+|+++|+++.
T Consensus 235 Aa~~i~~~~~~n~G---q~C~a~~rvlV~~~i~d~f~~~l~~~~ 275 (464)
T 3k9d_A 235 AVKHILDSKTFDNG---TICASEQSVVVERVNKEAVIAEFRKQG 275 (464)
T ss_dssp HHHHHHHHHTGGGG---CSTTSCCEEEEEHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCC---CCCCCCcEEEEeHHHHHHHHHHHHHhh
Confidence 99999999999999 99999999 88888887764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=6.7e-52 Score=399.43 Aligned_cols=257 Identities=20% Similarity=0.221 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcHH----HHhh-------CCHHHH
Q 020226 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (329)
Q Consensus 58 ~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (329)
.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5899999999999999 89999999999999999999999999999999999999853 3321 378899
Q ss_pred HHHHHHHHHhhhhhcCceeee---cCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHH
Q 020226 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (329)
Q Consensus 127 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~ 203 (329)
++.+++++.+++. .+...+. +.+...++.++|+|||++|+||| | +..++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 9999999988764 3444432 23456788999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCceeE
Q 020226 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (329)
Q Consensus 204 ~l~~~l----~~aGlP~g~v~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~iV 278 (329)
.+++++ .++|+|+|++|+++|.+. .+++.|..||+|+.|+||||+.+|+.+++.+ +||+++|+|||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998765 5899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhhccc
Q 020226 279 FDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKRQKL 328 (329)
Q Consensus 279 ~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~~~v 328 (329)
++|||+|.|++.+++++|.|+| .|++++| |+|+++|+++++++ ++
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G----~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~~ 308 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG----TCNTMETLLVARGIAPAVLSPLGRLYREK-GV 308 (444)
T ss_dssp CTTCCHHHHHHHCC-------------CCCCCEEEEEGGGHHHHHHHHHHHHHHT-TC
T ss_pred CCCCCHHHHHHHHHHHhcCCCc----ccCcCceEEEeHHHHHHHHHHHHHHHHHc-CC
Confidence 9999999999999999999999 8999999 99999999999887 44
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=8.9e-52 Score=396.70 Aligned_cols=256 Identities=16% Similarity=0.164 Sum_probs=228.9
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcH----HHHhh-------CCHHH
Q 020226 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKM-------GDIPG 125 (329)
Q Consensus 57 ~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~ 125 (329)
.-+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 8999999999999999999999999999999999999986 44431 48999
Q ss_pred HHHHHHHHHHhhhhhcCceeee---cCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHH
Q 020226 126 AANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202 (329)
Q Consensus 126 ~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~ 202 (329)
+++.++||+.+++. .+...+. +.+...++.++|+|||++|+||| ++..+++++|||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 4444332 22344678999999999999875 578899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCcee
Q 020226 203 LYFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (329)
Q Consensus 203 ~~l~~~l~----~aGlP~g~v~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~i 277 (329)
..+++++. ++|+|+|++|+++|. +.++++.|..||+|+.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 789999999999984 456788899999999999999999999999876 489999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh--------HHHHHHHHHHHHhh
Q 020226 278 IFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR--------KEFMMNLKRSWSKR 325 (329)
Q Consensus 278 V~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r--------d~f~~~l~~~~~~~ 325 (329)
|++|||+|.|++.+++++|.|+| .|++++| |+|+++|.++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G----~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 294 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG----TCNAAEKLLVHEKIAKEFLPVIVEELRKH 294 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT----STTSEEEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCHHHHHHHHHHHhccCCC----CCCCccEEEEehhhHHHHHHHHHHHHHHc
Confidence 99999999999999999999988 9999999 89999999999887
No 52
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.5e-52 Score=403.21 Aligned_cols=253 Identities=17% Similarity=0.187 Sum_probs=226.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcH----HHHhhCCHHH-HHHHHHHHH
Q 020226 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (329)
Q Consensus 60 ~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a 134 (329)
.+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 57899999999999 8999999999999999999999999999999999999998 7765458888 889999999
Q ss_pred Hhhhhhc------Cceeee---cCCccceeEeecCeeEEeecCcCcchhhhHHHHHHHHhcCCEEEEecCCCChHHHHHH
Q 020226 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (329)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l 205 (329)
...++.. ++..+. +.+...++.++|+|||++|+||| | +..++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8877655 443332 12445688999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeCCCCCcee
Q 020226 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (329)
Q Consensus 206 ~~~l~----~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lelgG~~~~i 277 (329)
++++. + +|+|+|++|+++ ++.++++.|+.||+|+.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667899999999999999999999999999865 589999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCCceEecCCh-------HHHHHHHHHHHHhh
Q 020226 278 IFDDVDVNTAADMALLGILFNKKFVWQVLVFMSR-------KEFMMNLKRSWSKR 325 (329)
Q Consensus 278 V~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~r-------d~f~~~l~~~~~~~ 325 (329)
|++|||+|.|++.+++++|.|+| .|++++| |+|+++|.++++++
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G----~C~a~~rvlV~~~id~f~~~l~~~~~~~ 296 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA----GCNAMETLLINPKFSKWWEVLENLTLEG 296 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC--------CCCCEEEEECTTSTTHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC----cCCcCcEEEEECCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999 9999999 78999999999887
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=76.55 E-value=48 Score=30.73 Aligned_cols=136 Identities=24% Similarity=0.256 Sum_probs=78.2
Q ss_pred CCccceeEeecCeeEEeecCc---CcchhhhHHHHHHHHhcCCE-EEE-ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 020226 149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (329)
Q Consensus 149 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~-Vvl-kps~~~p~~~~~l~~~l~~aGlP~g~v~~v~ 223 (329)
.+.....++.|+--|++..|. .||-..+ ...+||-.+|+. +|+ -|++.. ...-.+.-+.+.+|+- .++.
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~----eIy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVD----RVFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCC----EEEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCc----EEEE
Confidence 345556788999999999995 3554444 557899999997 333 344321 1112222334556663 3333
Q ss_pred CCchhHHHHHHh----CCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeC-CCCCceeE--cCCCCHHHHHHHHHHHH
Q 020226 224 GFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GGKSPLLI--FDDVDVNTAADMALLGI 295 (329)
Q Consensus 224 g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lel-gG~~~~iV--~~daD~~~a~~~~~~~~ 295 (329)
-.|...-.+|.- -|.||.|+=-|..=+..+=.. .. + .|-..+ .|.+=++| ++++|.+.++..++.=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~-v~--g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQA 266 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKL-VF--G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQA 266 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HB--T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHH
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHH-hc--C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhh
Confidence 225544455553 589999999998876544222 22 1 233332 24443333 55689998766655443
No 54
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=71.59 E-value=18 Score=29.49 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=32.0
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 185 ~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
.+||-||+|-.|-. +..++.++...++|++++-.|.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 47999999977654 778899998889999999999884
No 55
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=63.67 E-value=17 Score=28.85 Aligned_cols=114 Identities=17% Similarity=0.144 Sum_probs=72.2
Q ss_pred eeEEeecCcCc-chhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHHHhCC
Q 020226 161 GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (329)
Q Consensus 161 GVv~~i~p~n~-P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~-aGlP~g~v~~v~g-~~~~~~~~l~~~~ 237 (329)
|.++++..-+. +-...+.+-...++.|..++.-.. | ++.|.+ .|+|-..++-++. .++.+++.+.. .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~g-----T----a~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGT-----T----GNLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEETT-----H----HHHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEccH-----H----HHHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 65665555443 444444445556778998886422 3 455555 8999766664432 23456665554 6
Q ss_pred CCCEEEEeCC-------hHHHHHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCC
Q 020226 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKK 300 (329)
Q Consensus 238 ~v~~v~ftGs-------~~~g~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G 300 (329)
.|+.|+||-+ ...+..|.+.+.. .-+|+.- +++ .++.++.+.+.+..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T--------------~la-tA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVAT--------------NVA-TADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEES--------------SHH-HHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEe--------------CHH-HHHHHHHHHhcccc
Confidence 9999999877 5678899999988 6577763 333 35566666665555
No 56
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=62.71 E-value=2.3 Score=33.10 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=49.4
Q ss_pred HHHhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHHHhCCCCCEEEEeCC-------hHHHH
Q 020226 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-------TDVGR 252 (329)
Q Consensus 182 ~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~-aGlP~g~v~~v~-g~~~~~~~~l~~~~~v~~v~ftGs-------~~~g~ 252 (329)
..++.|..++- |.-|+ +.|.+ .|+|-..++-++ +.++.+++.+.. ..|+.|+||-+ ...+.
T Consensus 26 ~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~~~~h~~D~~ 95 (134)
T 2xw6_A 26 REVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLTAQPHEPDVQ 95 (134)
T ss_dssp HHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTTCCTTSCCSH
T ss_pred HHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcccCCCccchHH
Confidence 34556766654 23343 44555 799977777666 534566766655 69999999977 33567
Q ss_pred HHHHHhhcCCCccEE
Q 020226 253 QVMQAAATSNLKPVS 267 (329)
Q Consensus 253 ~i~~~~a~~~~~~~~ 267 (329)
.|.+.+.. .-+|+.
T Consensus 96 ~IrR~A~~-~~IP~~ 109 (134)
T 2xw6_A 96 ALLRVCDV-HGVPLA 109 (134)
T ss_dssp HHHHHHHH-HTCCEE
T ss_pred HHHHHHHH-cCCCeE
Confidence 78888877 556666
No 57
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=58.82 E-value=17 Score=28.33 Aligned_cols=72 Identities=13% Similarity=0.054 Sum_probs=49.6
Q ss_pred CCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHhCCCCCEEEEeCCh-----HHHHHHHH
Q 020226 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQ 256 (329)
Q Consensus 187 GN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~g~~i~~ 256 (329)
|-.++-- .-| ++.|.+.|+|-..++-++.. . +.+.+.+.. ..|+.|++|-+. ..+..|++
T Consensus 50 Gf~i~AT-----~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR 119 (143)
T 2yvq_A 50 GFKLFAT-----EAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRR 119 (143)
T ss_dssp TCEEEEE-----HHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHH
T ss_pred CCEEEEC-----chH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHH
Confidence 7776642 233 45667899998777766542 2 567666555 589999998665 47888999
Q ss_pred HhhcCCCccEEEe
Q 020226 257 AAATSNLKPVSLE 269 (329)
Q Consensus 257 ~~a~~~~~~~~le 269 (329)
.+-. ..+|++-+
T Consensus 120 ~Av~-~~IP~~T~ 131 (143)
T 2yvq_A 120 TAVD-SGIPLLTN 131 (143)
T ss_dssp HHHH-TTCCEECS
T ss_pred HHHH-hCCCeEcC
Confidence 8888 66777744
No 58
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=58.78 E-value=12 Score=31.79 Aligned_cols=69 Identities=10% Similarity=0.148 Sum_probs=46.8
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHH
Q 020226 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (329)
Q Consensus 177 ~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (329)
+..++-.+++||-||++.+. +.....+..+|..- +|.|.+.+++.+. + ....-..+.+.+..+......
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~-~----Y~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSS-Q----YEEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEES-S----CCCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccch-h----hcchhheeeecCCCCcccCcc
Confidence 35677788999999999776 44556667777776 9999999986521 1 122335566777666655443
No 59
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=53.86 E-value=84 Score=25.19 Aligned_cols=37 Identities=22% Similarity=0.366 Sum_probs=29.9
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 185 ~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
..||-||+|-.+- .+..++.++...++| +++-.|.|+
T Consensus 110 ~~~nlvVikT~PG---~A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPG---AAHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTT---CHHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCC---cHHHHHHHHHhCCCC-CeEEEEecC
Confidence 4699999997755 477889999888876 688888884
No 60
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=49.98 E-value=49 Score=21.29 Aligned_cols=46 Identities=15% Similarity=0.249 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 020226 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE 107 (329)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~ 107 (329)
.+.++.++.+.+.-.|-..|.|..- -+|+-++..|++-++.++.-+
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i 50 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRI 50 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHh
Confidence 4667777777777777777789763 567778888888888887755
No 61
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=49.27 E-value=1.5e+02 Score=26.57 Aligned_cols=130 Identities=12% Similarity=0.014 Sum_probs=75.9
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe-CC-------chhHHHHHHhCCCCCEEEEe---CChHHHHH
Q 020226 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GF-------GPTAGAAIASHMDIDKVSFT---GSTDVGRQ 253 (329)
Q Consensus 185 ~aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~-g~-------~~~~~~~l~~~~~v~~v~ft---Gs~~~g~~ 253 (329)
..|+.-++= +.--.+..+...+.+.|+. .=.++. |. -.+..+.+..+|+.+.|... |+... +.
T Consensus 167 ~~G~vgivS---qSG~l~~~i~~~~~~~g~G--~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~ 240 (334)
T 3mwd_B 167 RPGSVAYVS---RSGGMSNELNNIISRTTDG--VYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YK 240 (334)
T ss_dssp SCCSEEEEE---SCHHHHHHHHHHHHHHSSC--EEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-HH
T ss_pred CCCCEEEEe---CchHHHHHHHHHHHhcCCC--eEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-HH
Confidence 457776663 2223344455556666773 333443 21 23456778899999998875 55554 55
Q ss_pred HHHHhhc-CCCccEEEeCCCCCce-------------eEcCCCCHHHHHHHHHHHHhccCCCCCceEecCChHHHHHHHH
Q 020226 254 VMQAAAT-SNLKPVSLELGGKSPL-------------LIFDDVDVNTAADMALLGILFNKKFVWQVLVFMSRKEFMMNLK 319 (329)
Q Consensus 254 i~~~~a~-~~~~~~~lelgG~~~~-------------iV~~daD~~~a~~~~~~~~~~~~G~~~Q~C~a~~rd~f~~~l~ 319 (329)
+.+.+.+ ...|||+.--.|++.. ++..|.. -..+..++|..+| .-...+-+++.+.++
T Consensus 241 ~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~----~a~~~~aa~~~aG----v~~v~~~~el~~~~~ 312 (334)
T 3mwd_B 241 ICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASE----TAVAKNQALKEAG----VFVPRSFDELGEIIQ 312 (334)
T ss_dssp HHHHHHTTSCCSCEEEEEECTTCC----------------CGGG----SHHHHHHHHHHTT----CBCCSSGGGHHHHHH
T ss_pred HHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCc----cHHHHHHHHHHcC----CeEcCCHHHHHHHHH
Confidence 5555543 2458999887777654 2222221 1125566788889 223333388888888
Q ss_pred HHHHhhccc
Q 020226 320 RSWSKRQKL 328 (329)
Q Consensus 320 ~~~~~~~~v 328 (329)
+.+++|+.-
T Consensus 313 ~~~~~l~~~ 321 (334)
T 3mwd_B 313 SVYEDLVAN 321 (334)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHC
Confidence 888877643
No 62
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=43.70 E-value=21 Score=29.09 Aligned_cols=119 Identities=17% Similarity=0.083 Sum_probs=76.1
Q ss_pred EeecC-eeEEeecCcCc-chhhhHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHH
Q 020226 156 LREPI-GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGA 231 (329)
Q Consensus 156 ~~~P~-GVv~~i~p~n~-P~~~~~~~~~~AL~aGN~Vvlkps~~~p~~~~~l~~~l~~-aGlP~g~v~~v~g-~~~~~~~ 231 (329)
..-|. |.|+++..-+. +-...+.+-...++.|..++. |.-|+ +.|.+ .|+|-..++-++. .++.+++
T Consensus 22 ~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d 92 (178)
T 1vmd_A 22 IFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGA 92 (178)
T ss_dssp EEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHH
T ss_pred eeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHH
Confidence 33444 76666655543 444444555566778998876 23344 45555 7999666654432 2345666
Q ss_pred HHHhCCCCCEEEEeCC-------hHHHHHHHHHhhcCCCccEEEeCCCCCceeEcCCCCHHHHHHHHHHHHhccCC
Q 020226 232 AIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKK 300 (329)
Q Consensus 232 ~l~~~~~v~~v~ftGs-------~~~g~~i~~~~a~~~~~~~~lelgG~~~~iV~~daD~~~a~~~~~~~~~~~~G 300 (329)
.+.. ..|+.|+||-+ ...+..|.+.+.. .-+|+.- +++ .++.++.+.+.+..
T Consensus 93 ~I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~T--------------nla-tA~A~v~ail~~~~ 151 (178)
T 1vmd_A 93 MIAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAI--------------TRS-TADFLISSPLMNDV 151 (178)
T ss_dssp HHHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEES--------------SHH-HHHHHHHSGGGGSC
T ss_pred HHHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEe--------------CHH-HHHHHHHHHhcccc
Confidence 5554 69999999977 3467889999987 6577763 343 46677777777766
No 63
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=40.70 E-value=58 Score=21.90 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 186 aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
.||-+|+|-.|- .+..++.++.+.++|+ ++-.+.|+
T Consensus 12 ~~n~vVikT~pG---~A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEeeC
Confidence 699999997754 4778899998888876 88888884
No 64
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=40.26 E-value=61 Score=22.28 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 186 aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
++|-+|+|-.|- .+..++.++.+.++|+ ++-.+.|+
T Consensus 20 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPG---AAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 699999997754 4788899998888876 88888874
No 65
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=36.99 E-value=57 Score=22.67 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 186 aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
+||-+|+|-.|- .+..++.++.+.++|+ ++-.+.|+
T Consensus 24 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPG---NAQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 699999997754 4788999998887776 88888884
No 66
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=36.84 E-value=24 Score=27.03 Aligned_cols=44 Identities=14% Similarity=0.051 Sum_probs=30.9
Q ss_pred CcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhc
Q 020226 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (329)
Q Consensus 217 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~ 260 (329)
|.+++++|+..+.-......+++.+|.+||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 56888878655544333332679999999998877777777755
No 67
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=36.38 E-value=45 Score=26.46 Aligned_cols=50 Identities=18% Similarity=0.228 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC--CCCCEEEEeCChHHH
Q 020226 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVG 251 (329)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g 251 (329)
....+++.+.+.|+..-...+++.+ ..+.+.|.+. .+.|.|..||++..+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 4567888899999876667788776 6666666542 368999999987654
No 68
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=36.12 E-value=48 Score=22.83 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=30.6
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 186 aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
++|-+|+|-.|- .+..++.++.+.+.+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 699999997654 4778888888887889999999884
No 69
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=32.89 E-value=62 Score=25.74 Aligned_cols=52 Identities=19% Similarity=0.020 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---hCCCCCEEEEeCChHHH
Q 020226 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (329)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~---~~~~v~~v~ftGs~~~g 251 (329)
....+|++.|.+.|+.--...+++.+-..+...+. ...+.|.|..||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 35677899999999865555666654344555443 34678999999998543
No 70
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=30.30 E-value=33 Score=27.33 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh---CCCCCEEEEeCChHHH
Q 020226 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (329)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (329)
..+..+++.|.+.|+..-...+++.+-..+.+.|.. +.+.|.|..||++..+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 455678888999998655556666544455555543 2378999999988543
No 71
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=27.57 E-value=53 Score=26.72 Aligned_cols=52 Identities=19% Similarity=0.074 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC--CCCCEEEEeCChHHHH
Q 020226 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (329)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (329)
....+++.+.+.|+..-...+++.+-..+.+.|... .+.|.|..||++..+.
T Consensus 50 n~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 50 SGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 567788889999886555667766544555555442 5789999999886543
No 72
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=26.80 E-value=3.9e+02 Score=24.79 Aligned_cols=162 Identities=22% Similarity=0.267 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHhhhhhcCceeeecCCccceeEeecCeeEEeecCc---CcchhhhHHHHHHHHhcCCEEEE--ecCC
Q 020226 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAE 196 (329)
Q Consensus 122 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~Vvl--kps~ 196 (329)
-+..+.+.++.|-..... .........|.....++.|+--|++..|. -||-.. +...+||-.+|+.=|+ -|+.
T Consensus 87 ai~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~ 164 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPP 164 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHH-HHHHHHHHHHTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHH-HHhhccHhhcCCCeEEEECCCC
Confidence 355566666666443221 11112122255555778999999999996 355444 4557899999987554 3442
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh----CCCCCEEEEeCChHHHHHHHHHhhcCCCccEEEeC-C
Q 020226 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-G 271 (329)
Q Consensus 197 ~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lel-g 271 (329)
-.|. +.-+.+.+|+. .++.-.|...-.+|.- -|.||.|+=.|..=+..+= +.... ..-.|-..+ .
T Consensus 165 i~p~----iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AK-r~Vs~-~~G~VgIDm~A 234 (434)
T 1kae_A 165 IADE----ILYAAQLCGVQ----DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK-RQVSQ-RLDGAAIDMPA 234 (434)
T ss_dssp CCHH----HHHHHHHTTCC----EEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHHH-CTTSCEESCCC
T ss_pred CCHH----HHHHHHHcCCC----EEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHH-HHhHh-hcCccccCCCC
Confidence 2332 22234566663 2332224444445543 4899999988887654431 12211 112333333 2
Q ss_pred CCCceeE--cCCCCHHHHHHHHHHHH
Q 020226 272 GKSPLLI--FDDVDVNTAADMALLGI 295 (329)
Q Consensus 272 G~~~~iV--~~daD~~~a~~~~~~~~ 295 (329)
|.+=++| +++||.+..+-.++.=+
T Consensus 235 GPSEilViAD~tAnp~~vAaDLLsQA 260 (434)
T 1kae_A 235 GPSEVLVIADSGATPDFVASDLLSQA 260 (434)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 4444333 55689999766655443
No 73
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=25.71 E-value=65 Score=20.92 Aligned_cols=29 Identities=10% Similarity=0.157 Sum_probs=23.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 020226 76 PWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (329)
Q Consensus 76 ~w~~~~~~~R~~~l~~~a~~l~~~~~~l~ 104 (329)
.|..+|..+|......+...-.++..++.
T Consensus 36 ~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 36 NWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999988887776666666554
No 74
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=24.98 E-value=1.1e+02 Score=23.79 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=29.7
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020226 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (329)
Q Consensus 186 aGN~Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~ 225 (329)
.||-+|+|-.|- .+..++.++...++|+ ++-.+.|+
T Consensus 90 ~~n~vVikT~PG---~A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999997755 4788999999888876 88888884
No 75
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.70 E-value=1.1e+02 Score=26.28 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=54.5
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCCCEEEEeCChHHHHHHHHHhhcC-CCcc-EE
Q 020226 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKP-VS 267 (329)
Q Consensus 190 Vvlkps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~-~~~~-~~ 267 (329)
+|.+|.+........+.+.|.+.|+.- .....|.|+--|+..+-....+.+... ..+| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 455654433344455566676666531 124679999999999988888877652 1456 44
Q ss_pred EeCCCCCceeEcCCCCHHHHHHHHHHHH
Q 020226 268 LELGGKSPLLIFDDVDVNTAADMALLGI 295 (329)
Q Consensus 268 lelgG~~~~iV~~daD~~~a~~~~~~~~ 295 (329)
+.+|-.+.+-=....|++.+++.++.+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 6766555332223457888888887664
No 76
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.55 E-value=95 Score=26.74 Aligned_cols=33 Identities=27% Similarity=0.503 Sum_probs=23.5
Q ss_pred eecCe-eeeCCCCCeEEeecCCCCceEEEEeCCC
Q 020226 25 FINGE-FVDSVSGKTFETIDPRTGEAIARIAEGD 57 (329)
Q Consensus 25 ~i~G~-~~~~~~~~~~~v~~P~~g~~i~~~~~~~ 57 (329)
|++|+ |+.......+.++||.||++++.+....
T Consensus 179 ~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 179 WVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp EETTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred EECCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 55665 3333334578999999999999997653
No 77
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=22.96 E-value=93 Score=26.94 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=23.4
Q ss_pred eecCe-eeeCCCCCeEEeecCCCCceEEEEeCC
Q 020226 25 FINGE-FVDSVSGKTFETIDPRTGEAIARIAEG 56 (329)
Q Consensus 25 ~i~G~-~~~~~~~~~~~v~~P~~g~~i~~~~~~ 56 (329)
|++|+ |+.......+.++||.||++++.+...
T Consensus 188 ~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 188 CANGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EETTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred EeCCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 55675 333334557899999999999999754
No 78
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=21.19 E-value=1.7e+02 Score=19.53 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=20.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 020226 76 PWPRFSGAERRGIMLKFADLIEEHAEV 102 (329)
Q Consensus 76 ~w~~~~~~~R~~~l~~~a~~l~~~~~~ 102 (329)
.|..+|.++|..+...+...-+.+..+
T Consensus 40 ~Wk~ls~eeK~~y~~~A~~~k~~y~~~ 66 (80)
T 1gt0_D 40 EWKLLSETEKRPFIDEAKRLRALHMKE 66 (80)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 599999999988887776655555443
No 79
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.95 E-value=1e+02 Score=26.25 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=23.0
Q ss_pred eecCe-eeeCCCCCeEEeecCCCCceEEEEeCC
Q 020226 25 FINGE-FVDSVSGKTFETIDPRTGEAIARIAEG 56 (329)
Q Consensus 25 ~i~G~-~~~~~~~~~~~v~~P~~g~~i~~~~~~ 56 (329)
+++|+ |+.-.....+.++||.||++++.+...
T Consensus 157 ~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 157 WVNGELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EETTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred EeCCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 45675 333223457899999999999999754
No 80
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=20.81 E-value=4e+02 Score=23.47 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=59.7
Q ss_pred hhHHHHHHHHhcCCEEEEecCC-CChHHHHHHHHHHHHcCCCCCcEEEEeC---CchhHHHHHHhCCCCCEEEEeCC---
Q 020226 175 MFFMKVSPALAAGCTMIVKPAE-QTPLIALYFAHLAKLAGVPDGVLNVVPG---FGPTAGAAIASHMDIDKVSFTGS--- 247 (329)
Q Consensus 175 ~~~~~~~~AL~aGN~Vvlkps~-~~p~~~~~l~~~l~~aGlP~g~v~~v~g---~~~~~~~~l~~~~~v~~v~ftGs--- 247 (329)
.+..++-.|...|-+|++=... .... ...++|.+.|+|..-+-+... .+.+....++.. + -.|.|+|.
T Consensus 174 ~f~aq~~lA~~~glPViiH~~~gr~a~---~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~-G-~~i~~~g~~t~ 248 (339)
T 3gtx_A 174 FFRAAARVQRETGVPIITHTQEGQQGP---QQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRH-G-VSIAFDRIGLQ 248 (339)
T ss_dssp HHHHHHHHHHHHCCCEEEECSTTCCHH---HHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTT-T-CEEEECCTTCC
T ss_pred HHHHHHHHHHHHCCeEEEeCCCCcCHH---HHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHHc-C-cEEEEccCccc
Confidence 3446666777789999987532 3322 247889999998654433222 134445555542 3 57999984
Q ss_pred --------hHHHHHHHHHhhcCCCccEEEeCCCCC
Q 020226 248 --------TDVGRQVMQAAATSNLKPVSLELGGKS 274 (329)
Q Consensus 248 --------~~~g~~i~~~~a~~~~~~~~lelgG~~ 274 (329)
....+.+.+.+..-.+.++++|..+..
T Consensus 249 ~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~ 283 (339)
T 3gtx_A 249 GMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIW 283 (339)
T ss_dssp SSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEE
T ss_pred cccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCc
Confidence 155666777666534678999987654
No 81
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=20.68 E-value=85 Score=27.39 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=32.8
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 020226 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLK 91 (329)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~g~w~~~~~~~R~~~l~~ 91 (329)
.++++|||+|+...+. .....|... ---+-.+.. +.....++++.-. .. .=..++-++|..|...
T Consensus 220 ~YkFiVDG~w~~d~~~-~~~~~d~~G~~nn~~~v~~-~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~ 285 (294)
T 3nme_A 220 EYKYIIDGEWTHNEAE-PFIGPNKDGHTNNYAKVVD-DPTSVDGTTRERL--SS--EDPELLEEERSKLIQF 285 (294)
T ss_dssp EEEEEETTEEECCTTS-CEECSCTTSCCEEEEEECC-CCCTTCTTHHHHH--SS--SSCCCCHHHHHHHHHH
T ss_pred EEEEEECCEEeeCCCC-CeeeECCCCCEeEEEEECC-CCcchhHHHHHHh--hc--CCccccHHHHHHHHHH
Confidence 4578899999874332 222233322 223445554 2222223222211 12 3358889999876544
No 82
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=20.48 E-value=1.1e+02 Score=18.63 Aligned_cols=27 Identities=4% Similarity=0.016 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 020226 86 RGIMLKFADLIEEHAEVLAVLEALDAG 112 (329)
Q Consensus 86 ~~~l~~~a~~l~~~~~~l~~~~~~e~G 112 (329)
.++|..+...|++-++++.+++..|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477888888888888888887766543
No 83
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=20.45 E-value=1.1e+02 Score=21.86 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=26.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 020226 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEA 108 (329)
Q Consensus 76 ~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~ 108 (329)
.|..|+..++..+...+...-+++..++.....
T Consensus 44 ~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 44 RWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999988888877777777765443
No 84
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.35 E-value=2.4e+02 Score=20.01 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=26.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 020226 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL 109 (329)
Q Consensus 76 ~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~ 109 (329)
.|..|+..+|..+...+...-+++..++...-..
T Consensus 55 ~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~ 88 (102)
T 2co9_A 55 MWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRAS 88 (102)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5999999999999888887777777766654443
No 85
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.11 E-value=89 Score=21.50 Aligned_cols=29 Identities=14% Similarity=0.107 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 020226 76 PWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (329)
Q Consensus 76 ~w~~~~~~~R~~~l~~~a~~l~~~~~~l~ 104 (329)
.|..|+.++|..+...+...-+++..++.
T Consensus 55 ~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 55 RWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999888887777776666554
Done!