Query 020229
Match_columns 329
No_of_seqs 172 out of 1463
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:45:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u1j_A 5-methyltetrahydroptero 100.0 8.6E-70 3E-74 558.6 34.0 327 1-329 1-329 (765)
2 3ppg_A 5-methyltetrahydroptero 100.0 1.1E-67 3.8E-72 535.7 31.0 322 1-329 24-360 (789)
3 2nq5_A 5-methyltetrahydroptero 100.0 1.2E-65 4.1E-70 526.3 31.7 315 1-329 4-320 (755)
4 1t7l_A 5-methyltetrahydroptero 100.0 2.2E-60 7.6E-65 480.4 27.7 307 1-329 33-342 (766)
5 3rpd_A Methionine synthase (B1 100.0 1.2E-59 4E-64 444.6 21.0 287 1-329 18-326 (357)
6 1ypx_A Putative vitamin-B12 in 100.0 5.6E-59 1.9E-63 444.0 18.3 295 2-329 8-335 (375)
7 1t7l_A 5-methyltetrahydroptero 100.0 2E-55 7E-60 444.2 28.6 293 1-329 436-737 (766)
8 3ppg_A 5-methyltetrahydroptero 100.0 3.9E-55 1.3E-59 444.0 27.4 289 2-329 464-762 (789)
9 1u1j_A 5-methyltetrahydroptero 100.0 1.4E-52 4.7E-57 430.9 22.3 295 1-329 432-734 (765)
10 2nq5_A 5-methyltetrahydroptero 100.0 1.2E-52 4E-57 430.2 20.7 294 1-329 417-718 (755)
11 2inf_A URO-D, UPD, uroporphyri 99.8 2.5E-18 8.7E-23 162.8 14.5 184 135-329 129-329 (359)
12 1j93_A UROD, uroporphyrinogen 99.7 1.1E-18 3.7E-23 165.0 7.8 186 135-329 128-331 (353)
13 3cyv_A URO-D, UPD, uroporphyri 99.6 5.2E-15 1.8E-19 139.7 13.7 185 136-329 123-328 (354)
14 1r3s_A URO-D, uroporphyrinogen 99.6 2.4E-15 8.4E-20 142.7 11.4 184 137-329 134-340 (367)
15 2eja_A URO-D, UPD, uroporphyri 99.6 2.3E-14 7.9E-19 134.5 14.9 184 135-329 115-315 (338)
16 4ay7_A Methylcobalamin\: coenz 99.5 4.4E-13 1.5E-17 126.3 15.6 182 136-329 132-326 (348)
17 4exq_A UPD, URO-D, uroporphyri 99.5 4.1E-13 1.4E-17 127.3 13.8 185 136-329 128-338 (368)
18 1aj0_A DHPS, dihydropteroate s 93.7 2.5 8.5E-05 37.8 15.3 133 189-329 41-189 (282)
19 1eye_A DHPS 1, dihydropteroate 93.1 3.4 0.00012 36.9 15.3 130 190-329 33-181 (280)
20 3cu2_A Ribulose-5-phosphate 3- 93.0 0.52 1.8E-05 41.2 9.5 78 189-279 29-114 (237)
21 3k2g_A Resiniferatoxin-binding 93.0 0.57 2E-05 43.6 10.4 109 214-329 184-306 (364)
22 3rhg_A Putative phophotriester 92.5 1.8 6.2E-05 40.2 13.0 142 182-329 140-296 (365)
23 3o63_A Probable thiamine-phosp 92.4 0.44 1.5E-05 41.8 8.3 69 193-270 50-123 (243)
24 1tx2_A DHPS, dihydropteroate s 92.4 1.7 5.6E-05 39.3 12.2 131 188-329 65-208 (297)
25 2ob3_A Parathion hydrolase; me 91.7 1.8 6.1E-05 39.4 11.9 120 201-329 130-269 (330)
26 3inp_A D-ribulose-phosphate 3- 91.6 1.8 6.1E-05 38.0 11.2 84 188-279 42-131 (246)
27 1tqj_A Ribulose-phosphate 3-ep 91.6 2.2 7.7E-05 36.8 11.8 73 189-268 20-94 (230)
28 4h3d_A 3-dehydroquinate dehydr 91.4 3.9 0.00013 36.0 13.4 127 192-327 38-180 (258)
29 3gtx_A Organophosphorus hydrol 90.6 2.1 7.1E-05 39.4 11.1 124 198-329 151-282 (339)
30 3nl6_A Thiamine biosynthetic b 90.1 0.97 3.3E-05 44.4 8.8 66 192-270 31-96 (540)
31 3tr9_A Dihydropteroate synthas 90.0 11 0.00037 34.2 15.3 129 190-329 53-203 (314)
32 1tqx_A D-ribulose-5-phosphate 89.7 1.1 3.6E-05 38.9 7.8 20 188-207 20-39 (227)
33 2y5s_A DHPS, dihydropteroate s 89.0 12 0.00042 33.5 14.8 129 190-329 50-197 (294)
34 3pnz_A Phosphotriesterase fami 88.4 9.9 0.00034 34.6 13.9 138 182-329 129-274 (330)
35 2vp8_A Dihydropteroate synthas 88.2 8.6 0.00029 34.9 13.1 130 190-329 69-221 (318)
36 3o1n_A 3-dehydroquinate dehydr 87.3 15 0.00052 32.5 14.4 128 192-327 58-200 (276)
37 3ctl_A D-allulose-6-phosphate 87.1 3.3 0.00011 35.9 9.3 68 188-267 15-88 (231)
38 3tn4_A Phosphotriesterase; lac 87.1 7.7 0.00026 35.9 12.4 108 214-328 187-301 (360)
39 3ovp_A Ribulose-phosphate 3-ep 86.9 4.7 0.00016 34.7 10.2 72 188-267 19-95 (228)
40 1xi3_A Thiamine phosphate pyro 85.5 9.9 0.00034 31.6 11.5 68 189-269 29-96 (215)
41 4djd_D C/Fe-SP, corrinoid/iron 84.9 20 0.00069 32.5 13.7 123 189-329 83-218 (323)
42 3ovg_A Amidohydrolase; structu 84.6 6 0.0002 36.7 10.3 105 216-329 165-276 (363)
43 2yci_X 5-methyltetrahydrofolat 84.5 21 0.00071 31.5 13.8 126 190-329 38-173 (271)
44 1h1y_A D-ribulose-5-phosphate 83.6 6.5 0.00022 33.6 9.6 81 190-279 23-110 (228)
45 1rpx_A Protein (ribulose-phosp 81.1 7.6 0.00026 33.0 9.0 70 190-268 27-100 (230)
46 1vzw_A Phosphoribosyl isomeras 80.9 4.6 0.00016 34.7 7.6 68 193-268 39-106 (244)
47 2fli_A Ribulose-phosphate 3-ep 80.6 14 0.00048 30.9 10.6 69 189-266 19-91 (220)
48 1q7z_A 5-methyltetrahydrofolat 79.7 48 0.0017 32.4 15.4 136 181-329 121-274 (566)
49 3mcm_A 2-amino-4-hydroxy-6-hyd 79.7 26 0.00089 33.2 12.8 130 190-329 216-370 (442)
50 3noy_A 4-hydroxy-3-methylbut-2 78.5 14 0.00049 34.0 10.1 122 187-326 47-184 (366)
51 2v82_A 2-dehydro-3-deoxy-6-pho 77.4 13 0.00046 30.9 9.3 85 190-291 23-107 (212)
52 2vef_A Dihydropteroate synthas 77.2 19 0.00066 32.5 10.8 85 190-280 37-127 (314)
53 3vnd_A TSA, tryptophan synthas 74.3 15 0.0005 32.5 8.9 77 188-265 34-129 (267)
54 1thf_D HISF protein; thermophI 73.8 23 0.00079 30.2 10.1 69 193-268 37-105 (253)
55 1ur4_A Galactanase; hydrolase, 73.8 36 0.0012 31.8 11.9 93 176-269 131-235 (399)
56 4dnh_A Uncharacterized protein 73.5 5.1 0.00017 36.4 5.6 83 180-267 131-233 (396)
57 2tps_A Protein (thiamin phosph 73.4 15 0.00052 30.8 8.7 69 190-268 35-103 (227)
58 1yad_A Regulatory protein TENI 73.2 32 0.0011 28.8 10.7 64 192-269 35-98 (221)
59 3gg7_A Uncharacterized metallo 73.2 19 0.00065 31.4 9.4 20 309-328 178-197 (254)
60 3l5l_A Xenobiotic reductase A; 72.1 30 0.001 31.7 11.0 91 176-267 149-267 (363)
61 3l0g_A Nicotinate-nucleotide p 72.1 9 0.00031 34.5 7.0 61 191-267 219-280 (300)
62 2h9a_B CO dehydrogenase/acetyl 71.4 58 0.002 29.3 13.7 126 187-329 75-211 (310)
63 2x7v_A Probable endonuclease 4 70.3 38 0.0013 29.0 10.8 85 181-267 84-179 (287)
64 2ffi_A 2-pyrone-4,6-dicarboxyl 69.6 36 0.0012 29.3 10.6 131 190-328 96-237 (288)
65 3hgj_A Chromate reductase; TIM 69.3 44 0.0015 30.4 11.3 91 176-267 143-260 (349)
66 1rd5_A Tryptophan synthase alp 68.1 29 0.001 30.0 9.5 76 188-266 34-125 (262)
67 1h5y_A HISF; histidine biosynt 67.5 18 0.00062 30.6 7.9 71 190-267 37-107 (253)
68 4i6k_A Amidohydrolase family p 67.0 32 0.0011 30.1 9.7 131 190-328 109-249 (294)
69 3ipw_A Hydrolase TATD family p 65.9 37 0.0013 30.7 9.9 111 201-328 130-248 (325)
70 3rcm_A TATD family hydrolase; 65.3 44 0.0015 29.5 10.2 113 201-328 91-210 (287)
71 2yr1_A 3-dehydroquinate dehydr 65.2 69 0.0024 27.8 15.2 127 192-327 38-180 (257)
72 3tva_A Xylose isomerase domain 63.9 39 0.0013 29.1 9.6 84 183-267 99-183 (290)
73 3flu_A DHDPS, dihydrodipicolin 63.5 60 0.0021 28.7 10.8 119 187-308 29-156 (297)
74 3s5o_A 4-hydroxy-2-oxoglutarat 63.4 40 0.0014 30.1 9.6 119 187-308 36-165 (307)
75 2y1h_A Putative deoxyribonucle 63.4 66 0.0023 27.4 10.9 20 309-328 198-217 (272)
76 1z41_A YQJM, probable NADH-dep 63.4 56 0.0019 29.5 10.7 88 176-266 135-249 (338)
77 3kru_A NADH:flavin oxidoreduct 63.1 53 0.0018 29.9 10.5 89 176-266 134-249 (343)
78 3m5v_A DHDPS, dihydrodipicolin 62.0 64 0.0022 28.6 10.7 122 187-310 29-159 (301)
79 1vhc_A Putative KHG/KDPG aldol 61.9 37 0.0013 28.9 8.7 92 191-308 34-125 (224)
80 3b4u_A Dihydrodipicolinate syn 61.7 64 0.0022 28.5 10.6 121 187-310 25-158 (294)
81 3cpr_A Dihydrodipicolinate syn 61.7 77 0.0026 28.2 11.2 120 187-309 38-166 (304)
82 1sfl_A 3-dehydroquinate dehydr 61.5 77 0.0026 27.1 13.1 127 192-327 23-166 (238)
83 1qtw_A Endonuclease IV; DNA re 61.2 74 0.0025 27.1 10.8 88 179-267 82-180 (285)
84 3gr7_A NADPH dehydrogenase; fl 60.6 73 0.0025 28.8 11.0 88 176-266 135-249 (340)
85 2dqw_A Dihydropteroate synthas 60.2 85 0.0029 27.9 11.0 128 190-329 56-201 (294)
86 3a5f_A Dihydrodipicolinate syn 60.1 70 0.0024 28.2 10.6 120 187-309 23-151 (291)
87 3tak_A DHDPS, dihydrodipicolin 60.0 54 0.0018 29.0 9.8 119 187-308 23-150 (291)
88 4hb7_A Dihydropteroate synthas 59.4 93 0.0032 27.4 15.4 127 191-329 35-174 (270)
89 3tqv_A Nicotinate-nucleotide p 59.2 21 0.00073 31.8 6.8 61 190-266 209-270 (287)
90 1xky_A Dihydrodipicolinate syn 59.2 79 0.0027 28.0 10.8 120 187-309 34-162 (301)
91 1qop_A Tryptophan synthase alp 58.6 45 0.0015 29.0 8.9 76 189-266 34-129 (268)
92 2yxg_A DHDPS, dihydrodipicolin 58.1 73 0.0025 28.0 10.3 121 187-310 22-151 (289)
93 3gnn_A Nicotinate-nucleotide p 58.0 24 0.00082 31.6 7.0 61 191-267 221-282 (298)
94 3obe_A Sugar phosphate isomera 57.9 41 0.0014 29.6 8.7 62 183-246 111-173 (305)
95 1vyr_A Pentaerythritol tetrani 57.8 70 0.0024 29.3 10.4 90 176-267 152-272 (364)
96 2qgq_A Protein TM_1862; alpha- 57.8 81 0.0028 27.8 10.6 128 189-325 39-191 (304)
97 1zzm_A Putative deoxyribonucle 57.6 85 0.0029 26.5 10.5 91 220-328 114-208 (259)
98 2ehh_A DHDPS, dihydrodipicolin 57.3 82 0.0028 27.7 10.5 121 187-310 22-151 (294)
99 3guw_A Uncharacterized protein 56.7 43 0.0015 29.1 8.4 91 218-328 108-208 (261)
100 2wkj_A N-acetylneuraminate lya 56.7 80 0.0027 28.0 10.4 120 187-309 33-162 (303)
101 3si9_A DHDPS, dihydrodipicolin 56.3 82 0.0028 28.2 10.4 121 187-310 44-173 (315)
102 2r14_A Morphinone reductase; H 56.2 61 0.0021 29.9 9.7 90 176-267 157-276 (377)
103 2ftp_A Hydroxymethylglutaryl-C 56.1 74 0.0025 28.1 10.1 73 190-268 163-237 (302)
104 3na8_A Putative dihydrodipicol 55.9 83 0.0028 28.1 10.4 120 187-309 46-174 (315)
105 3n22_A Protein S100-A2; EF-han 55.9 26 0.00089 25.5 5.8 52 15-68 11-77 (98)
106 1icp_A OPR1, 12-oxophytodienoa 55.6 68 0.0023 29.5 10.0 85 181-266 162-276 (376)
107 1wbh_A KHG/KDPG aldolase; lyas 55.4 55 0.0019 27.5 8.6 83 191-291 33-115 (214)
108 1q7z_A 5-methyltetrahydrofolat 54.5 1.6E+02 0.0055 28.7 13.5 127 186-328 340-476 (566)
109 3l21_A DHDPS, dihydrodipicolin 54.5 96 0.0033 27.5 10.5 120 187-309 37-165 (304)
110 2nx9_A Oxaloacetate decarboxyl 54.3 67 0.0023 30.6 9.8 68 189-265 161-232 (464)
111 3daq_A DHDPS, dihydrodipicolin 54.3 86 0.003 27.6 10.1 119 187-308 24-151 (292)
112 3fkr_A L-2-keto-3-deoxyarabona 54.2 96 0.0033 27.6 10.5 120 187-310 30-161 (309)
113 3qfe_A Putative dihydrodipicol 54.1 73 0.0025 28.5 9.7 121 187-310 33-165 (318)
114 1fob_A Beta-1,4-galactanase; B 53.9 1.2E+02 0.0042 27.1 12.3 92 176-268 102-215 (334)
115 2r8w_A AGR_C_1641P; APC7498, d 53.8 82 0.0028 28.4 10.0 120 187-309 56-184 (332)
116 2hsa_B 12-oxophytodienoate red 53.7 60 0.0021 30.2 9.3 89 176-266 162-286 (402)
117 1f6k_A N-acetylneuraminate lya 53.5 90 0.0031 27.5 10.1 120 187-309 25-154 (293)
118 1mxs_A KDPG aldolase; 2-keto-3 53.4 43 0.0015 28.5 7.7 84 191-292 43-126 (225)
119 1ydn_A Hydroxymethylglutaryl-C 53.2 66 0.0023 28.3 9.2 70 192-267 161-232 (295)
120 3gka_A N-ethylmaleimide reduct 53.0 87 0.003 28.7 10.2 126 176-312 152-307 (361)
121 2rag_A Dipeptidase; aminohydro 52.7 1.5E+02 0.0051 27.7 12.2 29 300-328 333-361 (417)
122 3aal_A Probable endonuclease 4 52.7 98 0.0034 26.8 10.3 89 179-268 87-185 (303)
123 2rfg_A Dihydrodipicolinate syn 52.7 78 0.0027 28.0 9.6 120 187-309 22-150 (297)
124 2v9d_A YAGE; dihydrodipicolini 52.7 83 0.0029 28.5 9.9 121 187-310 53-182 (343)
125 3paj_A Nicotinate-nucleotide p 52.5 41 0.0014 30.4 7.6 60 191-266 243-303 (320)
126 3qze_A DHDPS, dihydrodipicolin 52.2 1E+02 0.0035 27.5 10.4 119 187-308 45-172 (314)
127 4eto_A Protein S100-A4; calciu 52.0 33 0.0011 24.5 5.8 52 15-68 10-76 (93)
128 1o5k_A DHDPS, dihydrodipicolin 52.0 93 0.0032 27.6 10.0 121 187-310 34-163 (306)
129 3l23_A Sugar phosphate isomera 51.7 63 0.0022 28.3 8.8 60 183-244 105-167 (303)
130 3d0c_A Dihydrodipicolinate syn 51.7 90 0.0031 27.8 9.9 76 187-266 34-113 (314)
131 2cw6_A Hydroxymethylglutaryl-C 51.6 73 0.0025 28.1 9.2 66 192-265 162-231 (298)
132 3zwh_A Protein S100-A4; Ca-bin 50.9 34 0.0012 25.2 5.8 52 15-68 13-79 (104)
133 3k13_A 5-methyltetrahydrofolat 50.7 1.4E+02 0.0046 26.6 11.2 130 189-329 40-182 (300)
134 2gou_A Oxidoreductase, FMN-bin 50.4 87 0.003 28.6 9.8 90 176-267 152-271 (365)
135 2yw3_A 4-hydroxy-2-oxoglutarat 50.3 76 0.0026 26.4 8.7 61 191-266 30-90 (207)
136 3ble_A Citramalate synthase fr 50.1 83 0.0028 28.4 9.5 111 188-316 171-293 (337)
137 3nxa_A Protein S100-A16; S100 50.1 33 0.0011 25.0 5.6 51 15-67 11-77 (100)
138 2y88_A Phosphoribosyl isomeras 50.0 43 0.0015 28.3 7.2 69 192-268 37-105 (244)
139 2ojp_A DHDPS, dihydrodipicolin 49.9 1.2E+02 0.0041 26.6 10.4 120 187-309 23-151 (292)
140 4dpp_A DHDPS 2, dihydrodipicol 49.9 1.4E+02 0.0047 27.4 10.9 118 187-308 81-206 (360)
141 3dz1_A Dihydrodipicolinate syn 49.8 85 0.0029 28.0 9.4 120 187-310 30-159 (313)
142 4ab4_A Xenobiotic reductase B; 49.8 95 0.0032 28.4 9.8 126 176-312 144-299 (362)
143 1rqb_A Transcarboxylase 5S sub 49.7 1E+02 0.0035 30.0 10.4 69 190-265 179-251 (539)
144 3kws_A Putative sugar isomeras 49.1 97 0.0033 26.5 9.6 89 179-267 97-197 (287)
145 2vc6_A MOSA, dihydrodipicolina 48.8 1.2E+02 0.0041 26.6 10.2 121 187-310 22-151 (292)
146 3nav_A Tryptophan synthase alp 48.5 65 0.0022 28.3 8.2 76 189-265 37-131 (271)
147 2bmb_A Folic acid synthesis pr 48.5 1.7E+02 0.0059 28.4 11.7 85 191-280 254-353 (545)
148 1o4u_A Type II quinolic acid p 47.4 29 0.00098 30.9 5.7 64 191-267 205-269 (285)
149 1lt8_A Betaine-homocysteine me 46.9 1.6E+02 0.0054 27.4 11.0 87 181-278 134-228 (406)
150 3nso_A Protein S100-A3; EF-han 46.5 35 0.0012 25.0 5.3 49 15-68 10-76 (101)
151 1k77_A EC1530, hypothetical pr 46.3 97 0.0033 25.9 9.0 87 182-268 81-180 (260)
152 2ekc_A AQ_1548, tryptophan syn 46.3 1.1E+02 0.0038 26.4 9.4 76 189-265 34-128 (262)
153 3h5d_A DHDPS, dihydrodipicolin 45.5 1.1E+02 0.0038 27.2 9.5 119 187-308 29-157 (311)
154 3hg3_A Alpha-galactosidase A; 45.2 64 0.0022 30.2 7.9 84 178-269 35-142 (404)
155 3e96_A Dihydrodipicolinate syn 44.6 98 0.0034 27.6 9.0 76 187-266 34-113 (316)
156 3a1g_A RNA-directed RNA polyme 44.0 22 0.00074 24.8 3.3 25 15-39 44-68 (80)
157 1i60_A IOLI protein; beta barr 43.0 1.4E+02 0.0047 25.0 9.5 86 182-268 80-176 (278)
158 1bf6_A Phosphotriesterase homo 43.0 1.5E+02 0.0053 25.1 13.9 106 216-329 134-244 (291)
159 3e2v_A 3'-5'-exonuclease; stru 42.9 2.1E+02 0.0072 26.6 13.0 115 200-328 154-304 (401)
160 3a98_A DOCK2, dedicator of cyt 42.7 44 0.0015 27.4 5.8 47 15-61 129-175 (184)
161 3ewb_X 2-isopropylmalate synth 42.6 1.1E+02 0.0039 26.9 9.0 74 189-267 153-230 (293)
162 1qpo_A Quinolinate acid phosph 42.4 55 0.0019 29.0 6.7 63 191-266 206-269 (284)
163 1xwy_A DNAse TATD, deoxyribonu 41.9 1.2E+02 0.0041 25.5 8.9 21 308-328 188-208 (264)
164 3t7v_A Methylornithine synthas 41.9 1.8E+02 0.006 25.9 10.4 120 192-324 100-236 (350)
165 2i5g_A Amidohydrolase; NYSGXRC 41.7 1.9E+02 0.0066 25.9 13.3 55 271-328 194-250 (325)
166 1qo2_A Molecule: N-((5-phospho 41.5 50 0.0017 27.9 6.3 69 192-268 36-104 (241)
167 1a4p_A S100A10; S100 family, E 41.4 38 0.0013 24.2 4.7 26 15-40 9-36 (96)
168 2gzx_A Putative TATD related D 41.2 1.3E+02 0.0046 25.1 9.1 19 310-328 187-205 (265)
169 3bg3_A Pyruvate carboxylase, m 40.4 1.1E+02 0.0038 30.9 9.3 48 190-243 265-312 (718)
170 1h8b_A ACT-EF34, alpha-actinin 39.7 45 0.0015 23.0 4.6 24 14-37 9-34 (75)
171 1hjs_A Beta-1,4-galactanase; 4 39.6 2.1E+02 0.0071 25.6 12.3 92 176-268 101-214 (332)
172 2r91_A 2-keto-3-deoxy-(6-phosp 39.4 1.9E+02 0.0066 25.2 10.2 116 187-308 20-145 (286)
173 3ngf_A AP endonuclease, family 39.2 1.5E+02 0.0052 25.0 9.1 85 182-267 89-184 (269)
174 3hbl_A Pyruvate carboxylase; T 38.5 1.3E+02 0.0046 32.0 10.1 75 188-267 694-768 (1150)
175 3l5a_A NADH/flavin oxidoreduct 38.4 2.1E+02 0.007 26.7 10.4 91 176-267 161-286 (419)
176 3dx5_A Uncharacterized protein 37.8 1.3E+02 0.0044 25.5 8.5 84 184-267 82-173 (286)
177 2d16_A Hypothetical protein PH 37.8 23 0.00078 28.4 3.0 32 286-318 126-158 (162)
178 3tha_A Tryptophan synthase alp 37.4 1.2E+02 0.0042 26.2 8.0 74 191-265 33-122 (252)
179 3ayv_A Putative uncharacterize 37.3 51 0.0017 27.8 5.6 90 179-268 69-164 (254)
180 1j6o_A TATD-related deoxyribon 37.3 1.9E+02 0.0065 24.5 9.5 21 308-328 195-215 (268)
181 1geq_A Tryptophan synthase alp 37.1 1.8E+02 0.0063 24.3 11.7 74 189-267 22-116 (248)
182 3eeg_A 2-isopropylmalate synth 37.0 91 0.0031 28.0 7.5 73 190-267 155-231 (325)
183 3lmz_A Putative sugar isomeras 36.7 1.9E+02 0.0063 24.2 12.2 114 189-311 33-152 (257)
184 1qap_A Quinolinic acid phospho 36.3 96 0.0033 27.6 7.4 59 191-265 220-279 (296)
185 1ydo_A HMG-COA lyase; TIM-barr 36.1 73 0.0025 28.4 6.6 68 192-267 163-234 (307)
186 2jvf_A De novo protein M7; tet 36.1 37 0.0013 23.4 3.5 44 184-231 31-74 (96)
187 3rmj_A 2-isopropylmalate synth 36.0 1.5E+02 0.005 27.2 8.8 73 190-267 161-237 (370)
188 1vgg_A Conserved hypothetical 35.7 21 0.00073 28.5 2.5 32 286-318 126-158 (161)
189 2ekm_A Hypothetical protein ST 35.3 22 0.00075 28.5 2.5 32 286-318 127-159 (162)
190 2zvr_A Uncharacterized protein 35.1 1.8E+02 0.0061 24.8 9.0 86 180-268 107-204 (290)
191 2xf7_A GP23.1; viral protein; 35.0 45 0.0015 20.8 3.4 20 16-38 23-42 (51)
192 2vc7_A Aryldialkylphosphatase; 34.7 2.2E+02 0.0076 24.5 10.8 104 216-328 147-257 (314)
193 2xio_A Putative deoxyribonucle 34.1 2.3E+02 0.0079 24.5 11.7 119 190-328 91-220 (301)
194 2lnk_A Protein S100-A4; EF-han 34.1 54 0.0018 24.5 4.6 26 15-40 22-52 (113)
195 4do4_A Alpha-N-acetylgalactosa 33.9 1.4E+02 0.0048 27.1 8.5 85 178-270 35-143 (400)
196 3p6l_A Sugar phosphate isomera 33.7 2.1E+02 0.0071 23.9 10.6 124 189-327 25-164 (262)
197 2ymb_A MITD1, MIT domain-conta 33.3 99 0.0034 27.0 6.7 71 195-269 118-198 (257)
198 3cqj_A L-ribulose-5-phosphate 32.9 2.1E+02 0.0072 24.4 9.1 88 180-268 102-196 (295)
199 1nvm_A HOA, 4-hydroxy-2-oxoval 32.7 2.7E+02 0.0093 24.9 13.0 123 189-324 33-168 (345)
200 3nwr_A A rubisco-like protein; 32.5 2.3E+02 0.0077 26.7 9.5 75 193-268 184-263 (432)
201 1uas_A Alpha-galactosidase; TI 32.4 1.8E+02 0.0061 26.3 8.8 84 178-269 25-133 (362)
202 3aty_A Tcoye, prostaglandin F2 32.4 1.7E+02 0.0057 26.9 8.6 90 176-267 164-287 (379)
203 1qjt_A EH1, epidermal growth f 32.4 77 0.0026 22.7 5.2 49 15-68 11-68 (99)
204 4a5z_A MITD1, MIT domain-conta 32.2 2E+02 0.0068 23.2 8.3 69 197-269 32-110 (163)
205 1ep3_A Dihydroorotate dehydrog 32.0 1.5E+02 0.0052 25.7 8.1 73 188-265 113-195 (311)
206 2qf7_A Pyruvate carboxylase pr 31.8 1.9E+02 0.0065 30.9 9.9 72 188-266 711-784 (1165)
207 3a5v_A Alpha-galactosidase; be 31.7 1.9E+02 0.0065 26.6 8.9 84 178-269 25-132 (397)
208 1w3i_A EDA, 2-keto-3-deoxy glu 31.1 2.7E+02 0.0091 24.3 10.1 116 187-308 21-146 (293)
209 1wvq_A Hypothetical protein PA 30.4 48 0.0016 26.7 3.8 31 286-317 131-162 (167)
210 2nuw_A 2-keto-3-deoxygluconate 30.4 2.7E+02 0.0093 24.2 10.3 74 187-266 21-98 (288)
211 1jub_A Dihydroorotate dehydrog 30.4 2.7E+02 0.0093 24.2 10.5 75 188-265 108-191 (311)
212 2bdq_A Copper homeostasis prot 30.3 2.5E+02 0.0086 23.8 9.3 69 186-264 76-151 (224)
213 1yxy_A Putative N-acetylmannos 30.0 2.4E+02 0.0081 23.4 8.7 27 242-268 84-110 (234)
214 3cny_A Inositol catabolism pro 30.0 2.5E+02 0.0087 23.7 9.5 87 182-268 86-192 (301)
215 4fo4_A Inosine 5'-monophosphat 29.9 2E+02 0.0068 26.3 8.6 67 189-265 110-176 (366)
216 1ka9_F Imidazole glycerol phos 29.4 2E+02 0.0068 24.1 8.2 70 192-268 37-106 (252)
217 3a21_A Putative secreted alpha 29.3 1.3E+02 0.0046 29.4 7.8 83 178-268 28-144 (614)
218 1rlh_A Conserved hypothetical 29.2 24 0.00082 28.4 1.8 32 286-318 138-170 (173)
219 1x1o_A Nicotinate-nucleotide p 29.1 1.5E+02 0.0053 26.1 7.4 59 191-265 208-267 (286)
220 3ceu_A Thiamine phosphate pyro 28.5 81 0.0028 26.1 5.3 21 190-210 17-37 (210)
221 1ps9_A 2,4-dienoyl-COA reducta 28.5 2E+02 0.007 28.2 9.1 89 176-265 132-247 (671)
222 1nvm_A HOA, 4-hydroxy-2-oxoval 28.2 2.3E+02 0.0079 25.4 8.7 70 190-266 153-226 (345)
223 3eb2_A Putative dihydrodipicol 28.1 3E+02 0.01 24.1 12.4 119 187-308 26-153 (300)
224 2hmc_A AGR_L_411P, dihydrodipi 28.0 2.8E+02 0.0095 25.0 9.2 116 187-309 48-174 (344)
225 1fa2_A Beta-amylase; TIM barre 27.8 1.5E+02 0.0052 28.3 7.4 82 187-268 35-128 (498)
226 3iix_A Biotin synthetase, puta 27.7 3.1E+02 0.011 24.0 12.4 118 192-323 93-226 (348)
227 3u0h_A Xylose isomerase domain 27.1 2.5E+02 0.0086 23.4 8.5 85 182-267 80-180 (281)
228 3ffs_A Inosine-5-monophosphate 26.9 2.9E+02 0.0099 25.6 9.2 66 189-265 146-211 (400)
229 3bdk_A D-mannonate dehydratase 26.5 2.6E+02 0.0087 25.7 8.7 24 182-205 100-123 (386)
230 2p12_A Hypothetical protein DU 25.7 1E+02 0.0036 25.2 5.2 37 15-55 123-159 (176)
231 2xn2_A Alpha-galactosidase; hy 25.7 2.2E+02 0.0077 28.6 8.8 19 192-210 356-374 (732)
232 3kdn_A Rubisco, ribulose bisph 25.5 3.4E+02 0.012 25.5 9.4 80 192-272 177-261 (444)
233 1j55_A S-100P protein; metal b 25.0 89 0.003 22.1 4.3 26 15-40 9-39 (95)
234 2w0m_A SSO2452; RECA, SSPF, un 25.0 1.3E+02 0.0046 24.2 6.1 34 197-230 119-154 (235)
235 2b7n_A Probable nicotinate-nuc 24.6 1.8E+02 0.006 25.4 7.0 62 191-265 194-256 (273)
236 3i5g_C Myosin catalytic light 24.6 1.3E+02 0.0045 23.3 5.7 27 14-40 84-113 (159)
237 3r2g_A Inosine 5'-monophosphat 24.4 3.5E+02 0.012 24.6 9.2 68 188-265 101-168 (361)
238 3qfw_A Ribulose-1,5-bisphospha 24.2 3E+02 0.01 25.4 8.6 75 192-268 152-232 (378)
239 4fnq_A Alpha-galactosidase AGA 24.1 4.1E+02 0.014 26.6 10.4 18 194-211 354-371 (729)
240 1vem_A Beta-amylase; beta-alph 24.0 35 0.0012 33.0 2.3 61 187-247 30-94 (516)
241 2zds_A Putative DNA-binding pr 23.9 2.1E+02 0.0073 24.8 7.6 90 179-268 104-210 (340)
242 3fk4_A Rubisco-like protein; s 23.8 3.5E+02 0.012 25.2 9.1 87 192-279 162-253 (414)
243 1wdp_A Beta-amylase; (beta/alp 23.7 1.3E+02 0.0043 28.8 6.0 81 187-267 34-126 (495)
244 3cc1_A BH1870 protein, putativ 23.6 2.3E+02 0.008 26.3 8.0 30 178-210 28-57 (433)
245 2zvi_A 2,3-diketo-5-methylthio 23.5 4.6E+02 0.016 24.5 11.2 86 193-279 176-266 (425)
246 1vli_A Spore coat polysacchari 23.5 4.4E+02 0.015 24.3 12.4 74 240-325 117-191 (385)
247 2w6r_A Imidazole glycerol phos 23.4 1.9E+02 0.0065 24.4 7.0 70 192-268 36-105 (266)
248 1s2w_A Phosphoenolpyruvate pho 23.4 2E+02 0.0068 25.5 7.1 68 188-268 172-240 (295)
249 3hq1_A 2-isopropylmalate synth 23.2 2.9E+02 0.01 27.4 8.8 70 190-268 97-171 (644)
250 3lrk_A Alpha-galactosidase 1; 23.0 1.8E+02 0.0061 27.8 7.0 84 178-269 46-152 (479)
251 4af0_A Inosine-5'-monophosphat 22.9 3.2E+02 0.011 26.6 8.7 67 189-267 283-351 (556)
252 2y5i_A S100Z, S100 calcium bin 22.6 1.2E+02 0.0041 21.6 4.7 26 15-40 10-40 (99)
253 3rm1_A Protein S100-B; alpha-h 22.5 1.9E+02 0.0067 19.9 6.1 26 15-40 9-39 (92)
254 2k6i_A Uncharacterized protein 22.5 86 0.0029 20.6 3.2 19 4-22 8-26 (56)
255 2lhi_A Calmodulin, serine/thre 22.5 2.1E+02 0.0071 22.5 6.6 48 15-68 84-142 (176)
256 1y0e_A Putative N-acetylmannos 22.0 3.2E+02 0.011 22.2 11.1 28 242-269 71-98 (223)
257 1yix_A Deoxyribonuclease YCFH; 21.8 3.4E+02 0.012 22.4 8.6 16 186-201 111-126 (265)
258 2lv7_A Calcium-binding protein 21.6 87 0.003 22.5 3.7 26 15-40 36-64 (100)
259 1nfp_A LUXF gene product; flav 21.5 45 0.0015 27.9 2.3 28 299-326 170-198 (228)
260 2oem_A 2,3-diketo-5-methylthio 21.5 4.9E+02 0.017 24.2 11.1 86 193-279 162-252 (413)
261 2g0w_A LMO2234 protein; putati 21.4 3.3E+02 0.011 23.1 8.3 75 186-267 105-185 (296)
262 1c07_A Protein (epidermal grow 21.4 1.3E+02 0.0043 21.1 4.5 49 15-68 10-67 (95)
263 3zy2_A Putative GDP-fucose pro 21.3 55 0.0019 30.0 2.9 29 300-328 261-289 (362)
264 1szn_A Alpha-galactosidase; (b 21.3 3.7E+02 0.013 24.8 8.9 84 178-269 28-135 (417)
265 4e38_A Keto-hydroxyglutarate-a 21.3 3.8E+02 0.013 22.7 9.4 96 191-312 51-146 (232)
266 2jbm_A Nicotinate-nucleotide p 21.2 2.1E+02 0.0073 25.2 6.9 63 191-266 209-272 (299)
267 3gzf_A Replicase polyprotein 1 21.2 1.8E+02 0.0061 21.1 5.0 36 22-57 49-84 (96)
268 3tjl_A NADPH dehydrogenase; OL 21.1 4.9E+02 0.017 24.0 9.8 89 176-266 158-286 (407)
269 3tdn_A FLR symmetric alpha-bet 20.9 2.7E+02 0.0093 23.3 7.4 68 191-267 40-109 (247)
270 2xfr_A Beta-amylase; hydrolase 20.9 1.6E+02 0.0053 28.5 6.0 82 186-267 31-124 (535)
271 2qiw_A PEP phosphonomutase; st 20.8 3.3E+02 0.011 23.4 7.9 67 187-268 169-238 (255)
272 3ivs_A Homocitrate synthase, m 20.2 4.3E+02 0.015 24.6 9.0 71 190-267 184-256 (423)
No 1
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=100.00 E-value=8.6e-70 Score=558.55 Aligned_cols=327 Identities=62% Similarity=0.984 Sum_probs=291.3
Q ss_pred CceeeccCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCccC
Q 020229 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (329)
Q Consensus 1 ~~t~~~G~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~~ 80 (329)
|.||++||||||..||||+|+|+||+|++|.++|+++.+++++++|+.|+++|||+||||||+|||||||++++||+||+
T Consensus 1 ~~~~~~g~PR~g~~reLk~a~e~~~~g~i~~~~L~~~~~~~~~~~~~~Q~~aGld~i~~gdfs~yd~vld~~~~l~~ip~ 80 (765)
T 1u1j_A 1 MASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPP 80 (765)
T ss_dssp -CBBCSCCCCSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTTCSBCEESCCCSSCHHHHHHHHTTCCCG
T ss_pred CCcceecCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEeccCCcccchHHHHHHHHhCCcCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhcCCCCCcEeecHHH
Q 020229 81 RYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVS 160 (329)
Q Consensus 81 r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~GP~t 160 (329)
||....|..++++||+|+||..++++++|||||||||||++|++.++++|++..++++++|++++++|+..||+|+||+|
T Consensus 81 r~~~~~~~~~~~~yf~~arG~~~~~a~emtkwfdtNyhy~vPe~~~~~~~~~~~~~~l~~~~~ak~~g~~~K~~l~GP~T 160 (765)
T 1u1j_A 81 RYGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVS 160 (765)
T ss_dssp GGCCCSSSCCHHHHHHHHHCCSSSCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHTTCCCEEEEECHHH
T ss_pred ceeccccCccHHHHHHHhCCCccccchhhheecccCcCceeeEEcCCcccccCCcchHHHHHHHHhcCCCceEEECCHHH
Confidence 99754444458999999999546789999999999999999999999999877788999999999988888999999999
Q ss_pred HHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeE
Q 020229 161 YLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIH 240 (329)
Q Consensus 161 l~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (329)
|+++++....++...+..+++++|+++|++++++|.++||++||||||+|+.+++++..+.+..+++.+.+.++ +.+++
T Consensus 161 ll~l~k~~~~~~~~~~~~~ll~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~-~~~i~ 239 (765)
T 1u1j_A 161 YLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLS-GLNVL 239 (765)
T ss_dssp HHHTCEECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTC-SSEEE
T ss_pred HHHhhhcccccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcC-CCeEE
Confidence 99776522222210157899999999999999999999999999999999999987666777777777765444 57899
Q ss_pred EeecccChH-HHHHHHHhCC-CcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcC
Q 020229 241 THMCYSNFN-DIIHSIIDMD-ADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 241 lH~C~Gn~~-~i~~~l~~~~-~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~ 318 (329)
||+|||++. ++++.|.+++ +|+|++|+.+.. +.++.+.+.++.++.+++||||+++...++++++.++++++++++|
T Consensus 240 lhtc~G~~~~~~~~~l~~l~~vd~l~lD~v~~~-~~l~~l~~~l~~~k~L~lGvVdgrni~~~d~e~v~~~l~~~~~~lg 318 (765)
T 1u1j_A 240 VETYFADIPAEAYKTLTSLKGVTAFGFDLVRGT-KTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVG 318 (765)
T ss_dssp EECCSSCCCHHHHHHHTTCTTCCEEEEESSSCT-THHHHHHHCCCSSCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHCC
T ss_pred EEeCCCCcchHHHHHHHcCCCCcEEEEEecCCc-ccHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHHhcC
Confidence 999999999 9999999999 999999988765 3455555445568899999999999999999999999999999999
Q ss_pred CCceEeCCCCC
Q 020229 319 TNILWVNPDLH 329 (329)
Q Consensus 319 ~~~l~ispdCG 329 (329)
.+++++||+||
T Consensus 319 ~~~l~lspsCg 329 (765)
T 1u1j_A 319 KDKLVVSTSCS 329 (765)
T ss_dssp SSCEEEEESSC
T ss_pred CCcEEEcCCCC
Confidence 99999999998
No 2
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=100.00 E-value=1.1e-67 Score=535.75 Aligned_cols=322 Identities=35% Similarity=0.605 Sum_probs=292.7
Q ss_pred CceeeccCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCccC
Q 020229 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (329)
Q Consensus 1 ~~t~~~G~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~~ 80 (329)
|+||++||||+|..||||+|.|+||+|++|.++|.++.++.+.+.|+.|+++|||.|++|+|+|||||||++.+||.||+
T Consensus 24 ~~~~~lg~prig~~relk~a~e~yw~g~~~~~eL~~~~~~lr~~~w~~q~~aGid~ip~~dFs~YD~vLd~~~~~g~ip~ 103 (789)
T 3ppg_A 24 VQSSVLGFPRIGGQRELKKITEAYWSGKATVEELLAKGKELREHNWKLQQKAGVDIIPSNDFSYYDQVLDLSLLFNAIPE 103 (789)
T ss_dssp CCEECSCCCCSCTTCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSBCEESCCCSSCHHHHHHHHTTCCCG
T ss_pred HHHhhcCCCCcCCccHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEecCCCcchHHHHHHHHHhCCCch
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhhhhhhhCCC----------CCCcccccccccCCceeeeceecCCCceeec---chhcHHHHHHHHhc
Q 020229 81 RYNWNGGEIGFDVYFSMARGNA----------SVPAMEMTKWFDTNYHFIVPELGPDVKFSYA---SHKAVTEYKEAKGL 147 (329)
Q Consensus 81 r~~~~~~~~~~~~~f~~~~g~~----------~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~---~~~~~~~~~~~~~~ 147 (329)
||+.. +..++++||+|+||.. ++++++|||||||||||+||++..+.+|++. .+.++++|++++++
T Consensus 104 r~~~~-~~~~l~~yf~~arg~~~~~~~~~~~~~~~a~eMtKWFdTNYHYiVPE~~~~~~f~l~~~~~~k~~~e~~eAk~~ 182 (789)
T 3ppg_A 104 RYTKF-DLAPIDVLFAMGRGLQAAATATQAAVDVTALEMVKWFDSNYHYVRPTFSHSTEFKLNTAAGIKPVDEFNEAKAL 182 (789)
T ss_dssp GGGSS-CCCHHHHHHHHHHCEEECC-----CEEECCCCEEECTTSSCEEECCEECTTCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred hhccc-CCCcHHHHHHHhcCCccccccccccCCcccccccccccCCCCeeceEECCCCCeeeccccchhHHHHHHHHHHc
Confidence 99854 3457899999999964 5779999999999999999999998899988 77899999999999
Q ss_pred CCCCCcEeecHHHHHhhcC-CCCC-ccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHH
Q 020229 148 GVETVPVLIGPVSYLLLSK-PAKG-VAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHS 225 (329)
Q Consensus 148 ~~~~k~~i~GP~tl~~~~~-~~~~-y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~ 225 (329)
|+.+||+|+||+||+++++ .... + .++.+++++|+++|.+.++.|.++||.|||||||+|+.+++.++.+++.++
T Consensus 183 G~~~kpVl~GPvT~L~L~k~~~~~~~---~~~~~lL~~Ll~~Y~~~l~~L~~~G~~wVQiDEP~Lv~dl~~~~~~~~~~a 259 (789)
T 3ppg_A 183 GVQTRPVILGPVSYLYLGKADKDSLD---LEPISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEAVQSKFKEA 259 (789)
T ss_dssp TCCCEEEEECHHHHHHTCEECGGGTT---CCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHHHHTHHHHH
T ss_pred CCCCCceeecHHHHHHHhcccccccc---CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEeeCCeeecCCCHHHHHHHHHH
Confidence 9999999999999999987 3221 2 366789999999999999999999999999999999999998889999999
Q ss_pred HHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHH
Q 020229 226 FRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEE 305 (329)
Q Consensus 226 ~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~ 305 (329)
|+.+.+. + ..++.|+++||+..+.++.+.+++|++|++|+.+++. .++.+.+.++.+|.+++||||.+|...++.+.
T Consensus 260 Y~~L~~~-~-~~kill~TYFg~~~~~l~~l~~lpV~gl~lDlv~~~~-~l~~v~~~~~~~k~L~aGvVdGRNiWr~dl~~ 336 (789)
T 3ppg_A 260 YDALVGA-D-VPELILTTYFGDVRPNLKAIENLPVAGFHFDFVRVPE-QLDEVASILKDGQTLSAGVVDGRNIWKTDFAK 336 (789)
T ss_dssp HHHHCST-T-SCEEEEECCSSCCGGGHHHHTTCCCSEEEEETTTCGG-GHHHHHHTCCTTCEEEEEEECSSCCBCCCHHH
T ss_pred HHHHhhC-C-CCCEEEECCCCCHHHHHHHHHcCCCcEEEEEccCCcc-hHHHHHhhcCCCCeEEEEEecCCccccCCHHH
Confidence 9998753 2 4678999999999999999999999999999998653 34444434566899999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceEeCCCCC
Q 020229 306 IADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 306 i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
+.++++++.+.+|.++++|+|+|+
T Consensus 337 ~l~~l~~l~~~lg~~~l~vspScS 360 (789)
T 3ppg_A 337 ASAVVQKAIEKVGKDKVVVATSSS 360 (789)
T ss_dssp HHHHHHHHHHHHCGGGEEEEESSC
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCC
Confidence 999999999999999999999997
No 3
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=100.00 E-value=1.2e-65 Score=526.26 Aligned_cols=315 Identities=30% Similarity=0.514 Sum_probs=282.5
Q ss_pred CceeeccCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCccC
Q 020229 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (329)
Q Consensus 1 ~~t~~~G~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~~ 80 (329)
+++|++||||||+.||||+|+|+||+|++|.++|+++.+++++.+|+.|+++|||+||+|+|+|||||||++.+||.||+
T Consensus 4 ~~~~~lgyPRig~~relk~a~e~yw~g~i~~~~L~~~~~~~r~~~~~~q~~aGid~i~~gdfs~yD~vl~~~~~~~~~p~ 83 (755)
T 2nq5_A 4 TKVSSLGYPRLGENREWKKLIEAYWAGKVSKNDLFAGAKELRLDFLKKQLNAGLDLIPVGDFSLYDHILDLSVQFNIIPK 83 (755)
T ss_dssp CEEBCSCCCSSCTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHTTCSBEEESCCCSSCHHHHHHHHTTCCCG
T ss_pred cccceecCCCCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCccchHHHHHHHHHhCCCch
Confidence 46888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhhhhhhhCC-CCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHH-hcCCCCCcEeecH
Q 020229 81 RYNWNGGEIGFDVYFSMARGN-ASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAK-GLGVETVPVLIGP 158 (329)
Q Consensus 81 r~~~~~~~~~~~~~f~~~~g~-~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~i~GP 158 (329)
||.+. ..++++||+|+||. .++ +++|||||||||||++|++.+ .+|++..+.++++|++++ ..|+..||+++||
T Consensus 84 r~~~~--~~~l~~yFa~aRG~~~~~-a~emtkwfdtNyhY~vPe~~~-~~~~~~~~~~l~~~~eA~~~~g~~vK~vl~GP 159 (755)
T 2nq5_A 84 RFAKE--PIDIDLYFAIARGNKENV-ASSMKKWFNTNYHYIVPEWSK-QRPKLNNNRLLDLYLEAREVVGDKAKPVITGP 159 (755)
T ss_dssp GGTTS--CSSHHHHHHHHHCCSSSC-CCCEEECTTSSCEEECCBCCS-CCCCCCCCHHHHHHHHHHHHHGGGEEEEEECH
T ss_pred hhccc--cccHHHHHHHHhCCCCCC-cccceeeccCCCceeeeeeeC-ceeeecCchHHHHHHHHHHhcCCCcEEEEccH
Confidence 99754 24699999999996 456 899999999999999999998 788888888999999999 6688889999999
Q ss_pred HHHHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCce
Q 020229 159 VSYLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 159 ~tl~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+||+++++. . + ..++++++|+++|++++++|.++||++||||||+|+.+++++..+.+.++++.+.+.+. +.+
T Consensus 160 ~Tla~l~k~-~---~--~~~dll~~L~~~y~~~l~~L~~~Ga~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~-~~~ 232 (755)
T 2nq5_A 160 ITYVALSTG-V---E--DFTAAVKSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVP-DAK 232 (755)
T ss_dssp HHHHHTCBS-C---S--CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSSGGGGGHHHHHHHHHHHHHHST-TCE
T ss_pred HHHHHHhcC-C---c--HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCHHHHHHHHHHHHHHHhccc-CCc
Confidence 999998763 1 1 35699999999999999999999999999999999998877777888888888864332 367
Q ss_pred eEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcC
Q 020229 239 IHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 239 i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~ 318 (329)
++||+|||+.. .++.|.++++|+|++|+.+...+.++.+.+.++.++.+++||||+++...++++++.+++++++++
T Consensus 233 v~lhtyfG~~~-~~~~l~~l~vd~l~lD~v~~~~~~l~~l~~~~~~~k~L~~GvVdgrniw~~d~e~v~~~l~~~~~~-- 309 (755)
T 2nq5_A 233 FIFQTYFEGLI-DSQVLSQLPVDAFGLDFVYGLEENLEAIKTGAFKGKEIFAGVIDGRNIWSSDFVKTSALLETIEEQ-- 309 (755)
T ss_dssp EEEECCSSCCT-THHHHTTSSCSEEEEESSSSHHHHHHHHHTTTTTTSEEEEEEECTTSCBCCCHHHHHHHHHHHHHT--
T ss_pred EEEEEeCCChH-HHHHHHhCCCCEEEEEecCCChhhHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHhh--
Confidence 89999999987 899999999999999988766344566665456689999999999999999999999999999987
Q ss_pred CCceEeCCCCC
Q 020229 319 TNILWVNPDLH 329 (329)
Q Consensus 319 ~~~l~ispdCG 329 (329)
.++++|+|+||
T Consensus 310 ~~~l~vsPsCs 320 (755)
T 2nq5_A 310 SAALTIQPSCS 320 (755)
T ss_dssp SSEEEEEESSC
T ss_pred cCCEEEcCCCC
Confidence 78999999998
No 4
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=100.00 E-value=2.2e-60 Score=480.38 Aligned_cols=307 Identities=31% Similarity=0.537 Sum_probs=276.1
Q ss_pred CceeeccCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCccC
Q 020229 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (329)
Q Consensus 1 ~~t~~~G~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~~ 80 (329)
++||++||||+|..||||+|.|+||+|++|.++|.++..+.+.+.|+.|++ |||.|+.|+|++||||||++.+||.||+
T Consensus 33 ~~~~~~g~prig~~relk~a~e~yw~g~~~~~~l~~~~~~lr~~~~~~q~~-g~~~i~~~dfs~yd~vld~~~~~g~~p~ 111 (766)
T 1t7l_A 33 TKAYAFGFPKIGEKREFKKALEDFWKGKITEEQFEEEMNKLRMYMVENYRK-NVDVIPSNELSYYDFVLDTAVMVGAVPE 111 (766)
T ss_dssp CEECCCCCCSSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH-HCSSCEESCCCSSCHHHHHHHHTTCCCG
T ss_pred HHhhccCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCeeccCCCcchhHHHhHHHHhCCCch
Confidence 358899999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhcCCCCCcEeecHHH
Q 020229 81 RYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVS 160 (329)
Q Consensus 81 r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~GP~t 160 (329)
||.+.. ++++||+|+||. ++++|||||||||||+||++. ...|++..+.++++|++++++|+.+||+++||+|
T Consensus 112 r~~~~~---~l~~yf~~arg~---~a~em~kwf~tnyhy~vpe~~-~~~f~~~~~~~~~~~~ea~~~g~~~~pvl~gp~t 184 (766)
T 1t7l_A 112 RFGEYR---GLSTYFDMARGG---KALEMTKFFNTNYHYLVPEIE-TEEFYLLENKPLEDYLFFKSKGIETAPWVIGPFT 184 (766)
T ss_dssp GGCSCC---SHHHHHHHHSST---TCCEEEECTTSSCEEEECBCC-CSCCCCSCCHHHHHHHHHHTTTCCCEEEEECHHH
T ss_pred hhcccc---chHHHHHHHcCC---cchhhhhhhcCCCCeEeeeec-CceeccCcchHHHHHHHHHhcCCCCeeEEEChHH
Confidence 997543 389999999994 789999999999999999999 8889888889999999999999999999999999
Q ss_pred HHhhcCCCCCccCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCce
Q 020229 161 YLLLSKPAKGVAKT--FSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 161 l~~~~~~~~~y~~~--~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (329)
|+++++. ..|... .+..+++++|+++|.+.++.|.++||.|||||||+|+.+++.++.++|..+|+.+. ..+
T Consensus 185 ~l~l~k~-~~~~~~~~~~~~~~l~~l~~~y~~~l~~l~~~g~~~vq~dep~l~~d~~~~~~~~~~~~y~~l~-----~~~ 258 (766)
T 1t7l_A 185 FLYLSKR-NGEWIRRPNQMEKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEKAHWDLILNVYRELS-----EFP 258 (766)
T ss_dssp HHHTCEE-TTEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGGSCCBHHHHHHHHHHHHTTT-----TSC
T ss_pred HHHHhcc-CCccccccchHHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCeeecCCCHHHHHHHHHHHHHhc-----CCc
Confidence 9999983 433100 01238999999999999999999999999999999999999888899999998872 358
Q ss_pred eEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhh-cccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhc
Q 020229 239 IHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE-GVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVL 317 (329)
Q Consensus 239 i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~-~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v 317 (329)
+.|.++||+.. .++.+.+++|+++++|+.+++. .+..+.+ .++.+|.+++||||.+|....+.+...+.++++.+
T Consensus 259 ~~~~tyf~~~~-~~~~~~~l~v~~~~~d~v~~~~-~~~~~~~~~~~~~~~l~~Gvvdgrniw~~d~~~~~~~~~~~~~-- 334 (766)
T 1t7l_A 259 LTVFTYYDSVS-DYEACVSLPVKRLHFDFVSNEE-NLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGA-- 334 (766)
T ss_dssp EEEECCSSCCS-CHHHHHTSSCSEEEEECSSCSH-HHHHHHHHCCCTTSEEEEEEECSSCCBCCCHHHHHHHHHHHTC--
T ss_pred EEEECCcCCHH-HHHHHHcCCCcEEEEEecCCHH-HHHHHHhccCCCCceEEEEEecCcchhhcCHHHHHHHHHHhhe--
Confidence 89999999998 8999999999999999998774 3555554 46779999999999999999999999999987754
Q ss_pred CCCceEeCCCCC
Q 020229 318 ETNILWVNPDLH 329 (329)
Q Consensus 318 ~~~~l~ispdCG 329 (329)
++|+|+|.
T Consensus 335 ----~~~~~s~s 342 (766)
T 1t7l_A 335 ----SAISNSCP 342 (766)
T ss_dssp ----SEEEESSC
T ss_pred ----EEEECCcC
Confidence 89999994
No 5
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=100.00 E-value=1.2e-59 Score=444.63 Aligned_cols=287 Identities=21% Similarity=0.237 Sum_probs=245.5
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCcc
Q 020229 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (329)
Q Consensus 1 ~~t~~~G-~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~ 79 (329)
++|+++| |||| .+|++|+++|++|+||.++|+++++++++++|+.|+++|||+||||||+|.||+.+|.+.++++-
T Consensus 18 ~ptt~vGSfprp---~~l~~ar~~~~~g~i~~~~l~~~~~~ai~~~V~~Q~~~GldvvtdGE~~R~d~~~~f~~~l~G~~ 94 (357)
T 3rpd_A 18 LPTSTAGSLPKP---LWLAEPETLWSPWKLQGEELITGKHDALRLSLQDQQLAGIDIVSDGEQTRQHFVTTFIEHLNGVD 94 (357)
T ss_dssp SCCCCSSCCCCC---TTTBCTTCSSCCBSCCHHHHHHHHHHHHHHHHHHHHHTTCSSBCCTTTTCSCTTHHHHHTSEEEE
T ss_pred cccceeccCCCC---HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCcchhhHHHHHHHhCCCee
Confidence 4678888 9999 79999999999999999999999999999999999999999999999999999999988775541
Q ss_pred CCCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhc-CCCCCcEeecH
Q 020229 80 PRYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGP 158 (329)
Q Consensus 80 ~r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~i~GP 158 (329)
+...+...++ +++++..|.|.|++++ ..++.++++++++++ +...|++||||
T Consensus 95 ------------------------~~~~~~v~~~-~~~~~~~p~i~G~v~~--~~~~~v~~~~~~~~~t~~~vK~~lpgP 147 (357)
T 3rpd_A 95 ------------------------FSKRKIVKIR-DRYDASVPTVVGPVSR--QKSVFVEDAKFLRKQTTQPIKWALPGP 147 (357)
T ss_dssp ------------------------EEEEEEEEET-TTEEEEEEEEEEEEEC--CSCSSHHHHHHHHHHCSSCBEEEEECH
T ss_pred ------------------------eccCcccccc-CCceeeCCEEEccCCC--CCCCcHHHHHHHHhhccCCceEEeCCH
Confidence 0011222344 6777789999997654 567789999999987 44678899999
Q ss_pred HHHHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCce
Q 020229 159 VSYLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 159 ~tl~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+|++.++. ++.| .++++++.++|++|++++++|+++||++||||||+|+... ....+.+++++|.++++++ ..
T Consensus 148 ~t~~~~~~-~~~y---~~~~e~~~dlA~a~~~ei~~l~~aG~~~IQiDeP~l~~~~-~~~~~~~v~~~n~~~~~~~--~~ 220 (357)
T 3rpd_A 148 MTMIDTLY-DDHY---KSREKLAWEFAKILNEEAKELEAAGVDIIQFDEPAFNVFF-DEVNDWGIACLERAIEGLK--CE 220 (357)
T ss_dssp HHHHTSSE-ESSS---CCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECGGGGTCH-HHHHHTHHHHHHHHHTTCC--SE
T ss_pred HHHHHHhh-hccC---CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCccccccH-HHHHHHHHHHHHHHHhCCC--Cc
Confidence 99987665 2433 4789999999999999999999999999999999998642 2223667899999999997 56
Q ss_pred eEEeeccc------------------ChHHHHHHHHhCCCcEEEEEcCCC--chhHHHHhhhcccCCCeeeeeeecCCCC
Q 020229 239 IHTHMCYS------------------NFNDIIHSIIDMDADVITIENSRS--DEKLLSVFREGVKYGAGIGPGVYDIHSP 298 (329)
Q Consensus 239 i~lH~C~G------------------n~~~i~~~l~~~~~d~~~lE~~~~--~~~~l~~l~~~~~~~~~i~~Gvvd~~~~ 298 (329)
+++|+||| +|+++++.|.++++|+|+||+++. +.++++.++ ++.+++||||++++
T Consensus 221 ~~iHiC~G~~~~~n~d~~~t~~~~~g~y~~i~~~l~~~~~D~i~lE~~~~r~~~e~l~~~~-----~k~v~lGvvd~~s~ 295 (357)
T 3rpd_A 221 TAVHICYGYGIKANTDWKKTLGSEWRQYEEVFPKLQKSNIDIISLECHNSHVPMELLELIR-----GKKVMVGAIDVATD 295 (357)
T ss_dssp EEEEECSCCSSHHHHHHHTTSCSCCCGGGGTHHHHHHSSCCEEEECCTTCCCCGGGGGGGT-----TSEEEEECSCTTCS
T ss_pred eEEEEecCCccCCccccccccccccCcHHHHHHHHHhCCCCEEEEEecCCCCChHHHHhcC-----CCEEEeccccCcCC
Confidence 78999997 367899999999999999999875 356666554 78999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 299 RIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 299 ~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
.+|++|+|+++++++++++|++|+|+|||||
T Consensus 296 ~ve~~eev~~ri~~a~~~v~~~~l~lsPdCG 326 (357)
T 3rpd_A 296 TIETAEEVADTLRKALKFVDADKLYPCTNCG 326 (357)
T ss_dssp SCCCHHHHHHHHHHHHTTSCGGGEEEECSSC
T ss_pred CCCCHHHHHHHHHHHHHhCCcccEEEeCCCC
Confidence 9999999999999999999999999999999
No 6
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=100.00 E-value=5.6e-59 Score=444.01 Aligned_cols=295 Identities=16% Similarity=0.195 Sum_probs=236.0
Q ss_pred ceeecc-CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCccC
Q 020229 2 ASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (329)
Q Consensus 2 ~t~~~G-~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~~ 80 (329)
+|+++| |||| ++|++|+++|++|+||.++|+++++++++++|+.|+++|||+||||||+|.||++||.+.++++.
T Consensus 8 ~tt~vGSfprp---~~l~~ar~~~~~g~i~~~~l~~~~~~~i~~~v~~Q~~~GldvvtdGE~~R~d~~~~f~~~l~G~~- 83 (375)
T 1ypx_A 8 YADHVGSILRT---KGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVE- 83 (375)
T ss_dssp SBCCCSCCCCC---HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHTCSEECCTTTTC--CCHHHHTTSEEEE-
T ss_pred ccceeCcCCCC---HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcchhhHHHHHHHHCCCee-
Confidence 477777 9999 99999999999999999999999999999999999999999999999999999999998887652
Q ss_pred CCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhcC-C-C-CCcEeec
Q 020229 81 RYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGLG-V-E-TVPVLIG 157 (329)
Q Consensus 81 r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~k~~i~G 157 (329)
++. ..++.++++.+..+..|.|.|++++. .++.+++++++++.. . . .|.++||
T Consensus 84 ~~~----------------------~~~~~~f~~~~~~~~~p~i~g~i~~~--~~p~~~~~~~l~~~~~~~~~vK~~l~g 139 (375)
T 1ypx_A 84 GYD----------------------AAGGIQFSKVQTKSHSVKITGPIDFT--THPFIEDFIFLKEAVGDNHVAKQTIPS 139 (375)
T ss_dssp EC--------------------------------------CEEEEEEEECS--CCTHHHHHHHHHHHHCSSSEECEEEEC
T ss_pred eec----------------------CCCceeecCCCCCccCceecCCCCCC--CCchHHHHHHHHHHhcCCCceEEecCC
Confidence 110 11223333333237789999876653 355999999999762 2 3 4889999
Q ss_pred HHHHHhhcCCCCCccCCCCH-HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCC-------------ChHH-HHHH
Q 020229 158 PVSYLLLSKPAKGVAKTFSL-LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDL-------------DSHK-LHAF 222 (329)
Q Consensus 158 P~tl~~~~~~~~~y~~~~~~-~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~-------------~~~~-~~~~ 222 (329)
|+|++.++...+.+| .+. ++++.+++++|++++++|+++||++||||||+++..+ +.+. .+.+
T Consensus 140 P~tl~~~~~~~~~~Y--~~~~~~l~~~la~a~~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 217 (375)
T 1ypx_A 140 PAMLHYRGDIEYQPY--LDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETY 217 (375)
T ss_dssp THHHHHHEEECSHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHH
T ss_pred HHHHHHHHhcchhhc--cChHHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHH
Confidence 999997765333444 256 9999999999999999999999999999999987544 2223 3778
Q ss_pred HHHHHHHHcCCCCCceeEEeecccC----------hHHHHHHHH-hCCCcEEEEEcCCC---chhHHHHhhhcccCCCee
Q 020229 223 IHSFRITNCGVQDTTQIHTHMCYSN----------FNDIIHSII-DMDADVITIENSRS---DEKLLSVFREGVKYGAGI 288 (329)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~lH~C~Gn----------~~~i~~~l~-~~~~d~~~lE~~~~---~~~~l~~l~~~~~~~~~i 288 (329)
++++|.++++++.++.+++|+|||| +.++++.|. ++++|+|+||+++. ..++++.+.+ .++.+
T Consensus 218 v~~~n~~~~~~~~~~~i~~HiC~gn~~s~~~~~g~~~~i~~~l~~~~~~d~i~lE~~~~r~g~~e~L~~~~~---~~~~v 294 (375)
T 1ypx_A 218 KNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTR---PDLKI 294 (375)
T ss_dssp HHHHHHHTTTCCTTCEEEEEECCC----------CCSGGGHHHHTTCCCSEEEEECCSCC---CCTTCCCCC---TTCEE
T ss_pred HHHHHHHHhcCCCCCeEEEEEeccccCCccccccchHHHHHHHHhhCCCCEEEEEecCCCCCcHHHHHHhhh---cCCeE
Confidence 9999999999987799999999985 568999999 99999999998753 3455544431 26799
Q ss_pred eeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 289 GPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 289 ~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
++||||++++.+|++|+|++||++|++++|.+|+++|||||
T Consensus 295 ~lGvvd~~~~~~e~~e~v~~ri~~a~~~v~~e~l~lsPdCG 335 (375)
T 1ypx_A 295 VLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCG 335 (375)
T ss_dssp EEEEECSSSCC-CCSHHHHHHHHHHHHHSCGGGEEEEESSC
T ss_pred EEeeecCcCCCCCCHHHHHHHHHHHHHhcCccceEecCCCC
Confidence 99999999999999999999999999999999999999998
No 7
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=100.00 E-value=2e-55 Score=444.23 Aligned_cols=293 Identities=27% Similarity=0.438 Sum_probs=249.0
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCcc
Q 020229 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (329)
Q Consensus 1 ~~t~~~G-~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~ 79 (329)
++|++|| |||| +|||+|+++||+|+||.++|+++++++++++|+.|+++|||+||||||+|+|||+||.++++++|
T Consensus 436 ~pTt~IGSfPrp---~ELK~Are~y~~G~Is~eeL~~~~~~~i~~~V~~QeeaGLDvItdGEFsR~D~Vldf~~~L~Gi~ 512 (766)
T 1t7l_A 436 FPTTTIGSFPQT---PEVRKMRSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVHGEFERTDMVEFFAEKLNGIA 512 (766)
T ss_dssp SCBCCCSCCCCC---HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSSBCCCCTTCSSHHHHHHTTSEEEE
T ss_pred cceeeeCcCCCC---HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCccCCCCcchhhHHHHHHHHhCCcc
Confidence 3577788 9999 99999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhcCCC-CCcEeecH
Q 020229 80 PRYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGLGVE-TVPVLIGP 158 (329)
Q Consensus 80 ~r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~k~~i~GP 158 (329)
.|+. | ....+++. .|..|.+.|++.+ ..++.+++|+++++.+.. .|++++||
T Consensus 513 ~~~~---g---------------------~~~~~~~~-~~~~pi~~G~i~r--a~pMtlde~~~Aksl~~~pvK~~LtGP 565 (766)
T 1t7l_A 513 TTQN---G---------------------WVLSYGSR-CYRPPIIYGTVTR--PEPMTLKEITYAQSLTEKPVKGMLTGP 565 (766)
T ss_dssp CCSS---C---------------------CEEEETTE-EECCCEEEEEEEC--CSCSSHHHHHHHHHTCSSCBEEEEECH
T ss_pred cccc---c---------------------cccccccc-cccCceeecCCcc--CCcChHHHHHHHHHhcCCCeEEEEeCH
Confidence 6642 1 01112221 2444667765422 345689999999988643 69999999
Q ss_pred HHHHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCCh------HHHHHHHHHHHHHHcC
Q 020229 159 VSYLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDS------HKLHAFIHSFRITNCG 232 (329)
Q Consensus 159 ~tl~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~------~~~~~~~~~~~~~~~~ 232 (329)
+|++.++...+. .++++++++|+++|++++++|+++||++||||||+|+.+++. +.++.+.+++|.+ ++
T Consensus 566 vTlL~ls~~r~d----~~r~ell~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a-~g 640 (766)
T 1t7l_A 566 VTIMSWSYYRED----IPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-AN 640 (766)
T ss_dssp HHHHHTSEECSS----SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTSCSSGGGHHHHHHHHHHHHHHH-TC
T ss_pred HHHHHHhhccCC----CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccCCCcchhHHHHHHHHHHHHHHh-hc
Confidence 999977663222 268999999999999999999999999999999999877643 2335667888888 88
Q ss_pred CCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHHH
Q 020229 233 VQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRIN 311 (329)
Q Consensus 233 ~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~ 311 (329)
++.++.+++|+|||++.++++.|.++++|+|++|..+++.++++.+++ . ..++.+++||||++++.+|++|+++++++
T Consensus 641 v~~~~~I~lH~C~G~~~di~~~L~~l~VD~IsLE~~Rs~~elL~~l~~-~p~~~k~L~lGVVD~rn~~ved~EeI~~rI~ 719 (766)
T 1t7l_A 641 ARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFEN-FKGWIKQIGVGVWDIHSPAVPSINEMREIVE 719 (766)
T ss_dssp CCTTSEEEEECCCSCCTTTHHHHTTSCCSEEEEECTTTTTGGGHHHHT-STTCCSEEEEECSCTTSCSCCCHHHHHHHHH
T ss_pred CCCCceEEEEEecCchHHHHHHHHcCCCCEEEEecCCCchhHHHHHHh-ccccCCeEEEEEECCCCCCCCCHHHHHHHHH
Confidence 877789999999999999999999999999999988877888888863 2 12479999999999999999999999999
Q ss_pred HHHHhcCCCceEeCCCCC
Q 020229 312 KMLAVLETNILWVNPDLH 329 (329)
Q Consensus 312 ~a~~~v~~~~l~ispdCG 329 (329)
++++++|.+|+|||||||
T Consensus 720 ~a~~~Vg~erL~VsPdCG 737 (766)
T 1t7l_A 720 RVLRVLPKELIWINPDCG 737 (766)
T ss_dssp HHTTTSCGGGEEEECSSC
T ss_pred HHHHhcCcccEEEeCCCC
Confidence 999999999999999998
No 8
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=100.00 E-value=3.9e-55 Score=444.01 Aligned_cols=289 Identities=28% Similarity=0.453 Sum_probs=230.1
Q ss_pred ceeecc-CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCccC
Q 020229 2 ASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (329)
Q Consensus 2 ~t~~~G-~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~~ 80 (329)
+|+++| |||| ++|++||++|.+|+||.++|+++++++++++|+.|+++|||+||||||+|.||+.+|.+.++++-
T Consensus 464 ptt~VGSfPRp---~~L~~aR~~~~~G~is~~el~~~~~~aI~~vV~~Qe~~GLdvvtDGE~~R~d~v~~F~e~L~G~~- 539 (789)
T 3ppg_A 464 PTTTIGSFPQT---KDIRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVHGEPERNDMVQYFGEQLNGFA- 539 (789)
T ss_dssp CBBCCSCCCCC---HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSBBCCCCTTCSCTTHHHHTTSEEEE-
T ss_pred eeccccCcCCC---HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCccchhHHHHHHHhCCCee-
Confidence 577777 9999 99999999999999999999999999999999999999999999999999999999998776552
Q ss_pred CCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhc-CCCCCcEeecHH
Q 020229 81 RYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGPV 159 (329)
Q Consensus 81 r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~i~GP~ 159 (329)
+ ...+..++|++. .+..|.|.|++++ ..+..+++|++++++ ....|.++|||+
T Consensus 540 -~----------------------~~~g~vq~~g~r-~~~~p~i~G~V~~--~~p~~v~~~~~~qs~t~~pvK~~L~gP~ 593 (789)
T 3ppg_A 540 -F----------------------TTNGWVQSYGSR-YVRPPIIVGDVSR--PKAMTVKESVYAQSITSKPMKGMLTGPV 593 (789)
T ss_dssp -C----------------------CSSCCEEEETTE-EECCCEEEEEEEC--CSCSSHHHHHHHHHTCSSCBEEEEECHH
T ss_pred -E----------------------ecCcceEecCCc-cccCCeeeccCCC--CCCCcHHHHHHHHhhccCCCceeccchH
Confidence 0 011233455443 4567888887654 334459999999987 234577899999
Q ss_pred HHHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCCh-------HHHHHHHHHHHHHHcC
Q 020229 160 SYLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDS-------HKLHAFIHSFRITNCG 232 (329)
Q Consensus 160 tl~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~-------~~~~~~~~~~~~~~~~ 232 (329)
|++.++.. ..| .+.++++.+||.+|++++++|+++||++||||||++...+.. +.++.+++++|.++++
T Consensus 594 ti~~~s~~-r~~---~~~ee~~~dlA~A~r~Ei~~L~~AG~r~IQiDEPal~e~l~~r~g~d~~~~l~~av~a~n~a~~g 669 (789)
T 3ppg_A 594 TILRWSFP-RDD---VSGKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSG 669 (789)
T ss_dssp HHHHTSBC-CSS---SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTTGGGSCSSSSHHHHHHHHHHHHHHHHHHSS
T ss_pred hHhhhhcc-ccC---CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhcccccccCCHHHHHHHHHHHHHHHHhc
Confidence 99877763 333 378999999999999999999999999999999998754321 2236789999999999
Q ss_pred CCCCceeEEeecccChHHHHHHHHhCCCcEEEEEc-CCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHH
Q 020229 233 VQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN-SRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRIN 311 (329)
Q Consensus 233 ~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~-~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~ 311 (329)
+++++.|++|+||||+.. +.|.++++|+|++|| .+++.++|+.+.+ .++.|++||||++++.+|++|+|++||+
T Consensus 670 ~p~d~~I~tHiC~Gnf~~--~~I~~l~aD~islE~~~Rs~~e~L~~~~~---~~k~V~lGVvds~sp~vEs~EeV~~rI~ 744 (789)
T 3ppg_A 670 VENSTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDDPNYIQEFSE---YPNHIGLGLFDIHSPRIPSKQEFVSRIE 744 (789)
T ss_dssp SCTTSEEEEECC---CCH--HHHHHHCCSEEEEC---------CGGGGG---CCSEEEEC-------CCCCHHHHHHHHH
T ss_pred CCCCcEEEEeccCCCCCh--hHHHhCCCCEEEEecCCCcchHHHHHHHh---cCCeEEeeeecCCCCCCCCHHHHHHHHH
Confidence 998899999999999986 999999999999996 3455677777764 4689999999999999999999999999
Q ss_pred HHHHhcCCCceEeCCCCC
Q 020229 312 KMLAVLETNILWVNPDLH 329 (329)
Q Consensus 312 ~a~~~v~~~~l~ispdCG 329 (329)
++++++|++|+|+|||||
T Consensus 745 ~a~~~v~~erL~lsPdCG 762 (789)
T 3ppg_A 745 EILKVYPASKFWVNPDCG 762 (789)
T ss_dssp HHTTTSCGGGEEECCSCC
T ss_pred HHHHhcCcccEEEeCCCC
Confidence 999999999999999999
No 9
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=100.00 E-value=1.4e-52 Score=430.94 Aligned_cols=295 Identities=46% Similarity=0.618 Sum_probs=236.8
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCcc
Q 020229 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (329)
Q Consensus 1 ~~t~~~G-~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~ 79 (329)
++|++|| |||| ++|++|+++|.+|+||.++|+++++++++++|+.|+++|||+||||||+|.|||.||.+.++++-
T Consensus 432 ~~tt~vGSfprp---~~l~~ar~~~~~g~i~~~~~~~~~~~~i~~~V~~Q~~~GldvvtdGE~~R~~~~~~f~~~l~G~~ 508 (765)
T 1u1j_A 432 LPTTTIGSFPQT---VELRRVRREYKAKKVSEEDYVKAIKEEIKKVVDLQEELDIDVLVHGEPERNDMVEYFGEQLSGFA 508 (765)
T ss_dssp SCBBCCSBCCCC---SCCC-------------CCHHHHHHHHHHHHHHHHHSSCCSBBCCBCTTCSCTTHHHHTTSTTEE
T ss_pred CccCccCCCCCC---HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeeecchhccccHHHHHHHHhCCCc
Confidence 3577888 9999 78999999999999999999999999999999999999999999999999999999998876552
Q ss_pred CCCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhcC-CCCCcEeecH
Q 020229 80 PRYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGLG-VETVPVLIGP 158 (329)
Q Consensus 80 ~r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~i~GP 158 (329)
+. ..++.+.|++. .+..|.|.|++++ ..+..+++++++++.. ...|.++|||
T Consensus 509 --~~----------------------~~g~~~~~~~~-~~~~p~i~g~i~~--~~p~~ve~~~~l~~~~~~pvK~~l~GP 561 (765)
T 1u1j_A 509 --FT----------------------ANGWVQSYGSR-CVKPPVIYGDVSR--PKAMTVFWSAMAQSMTSRPMKGMLTGP 561 (765)
T ss_dssp --CC----------------------SSCCEEEETTE-EECCCEECSCCCC--CSCSSTHHHHHHTTSCSSCBEEEEECH
T ss_pred --cc----------------------cCCcccccccc-cCcCCeeecCcCC--CCCCHHHHHHHHHHHhcCCeEEEecCH
Confidence 10 11333445543 3567889998765 4566899999999762 3457789999
Q ss_pred HHHHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCC-----hHH-HHHHHHHHHHHHcC
Q 020229 159 VSYLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLD-----SHK-LHAFIHSFRITNCG 232 (329)
Q Consensus 159 ~tl~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-----~~~-~~~~~~~~~~~~~~ 232 (329)
+|++.++.. ..+ .+.++++.+++.+|++++++|+++||++||||||++...+. .+. .+.+++++|.++++
T Consensus 562 ~Tl~~~~~~-r~~---~~~~~l~~~lA~a~~~ev~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~ 637 (765)
T 1u1j_A 562 VTILNWSFV-RND---QPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCG 637 (765)
T ss_dssp HHHHHTSEE-CTT---SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhc-cCc---CcHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcccccccccCCCHHHHHHHHHHHHHHHHhc
Confidence 999866653 333 27899999999999999999999999999999999987652 223 36678999999999
Q ss_pred CCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHH
Q 020229 233 VQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINK 312 (329)
Q Consensus 233 ~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~ 312 (329)
++.++.+++|+||||+.++++.|.++++|+|+||..+.+.++++.+.+....++.+++||||++++.+|++|+|++++++
T Consensus 638 v~~~~~i~~HiC~G~~~~i~~~l~~~~~D~islE~~rs~~e~L~~~~~~~~~~~~v~lGvvd~~s~~ve~~eev~~ri~~ 717 (765)
T 1u1j_A 638 VQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNK 717 (765)
T ss_dssp SCSSSEEEEECSCSCCTTTHHHHHTTCCSEEECCBSSSCTTGGGGGTTTTCCCSEECCBSSCTTSSSCCTHHHHHHHHHH
T ss_pred CCCCCeEEEEeccCCcHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHhhccCCCeEEEeecCCccCCCCCHHHHHHHHHH
Confidence 98778999999999999999999999999999997776677777765201236799999999999999999999999999
Q ss_pred HHHhcCCCceEeCCCCC
Q 020229 313 MLAVLETNILWVNPDLH 329 (329)
Q Consensus 313 a~~~v~~~~l~ispdCG 329 (329)
+++++|.+|+++|||||
T Consensus 718 a~~~v~~e~l~lsPdCG 734 (765)
T 1u1j_A 718 MLAVLEQNILWVNPDCG 734 (765)
T ss_dssp HHHSSCSTTBCBBCSSC
T ss_pred HHHhcCcccEEEeCCCC
Confidence 99999999999999998
No 10
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=100.00 E-value=1.2e-52 Score=430.20 Aligned_cols=294 Identities=30% Similarity=0.448 Sum_probs=220.8
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcccchhHHhhhhhcCCcc
Q 020229 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (329)
Q Consensus 1 ~~t~~~G-~PRp~~~~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ld~~~~~~~~~ 79 (329)
++|++|| |||| ++|++|+++|.+|+||.++|+++++++++++|+.|+++|||+||||||+|.|||.||.+.++++-
T Consensus 417 ~~tt~VGSfprp---~~l~~ar~~~~~g~i~~~~l~~~~~~~i~~~V~~Q~~~GldvvtdGE~~R~d~v~~F~~~l~G~~ 493 (755)
T 2nq5_A 417 LPTTTIGSFPQS---REIRRTRLAWKRGDISDAEYKQFIQAEIERWIRIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFT 493 (755)
T ss_dssp SCBBCCSBCCC--------------------CHHHHHHHHHHHHHHHHHHHHHTCSBBCCBCTTCSCTTHHHHTTEEEEE
T ss_pred cceeeeCCCCCC---HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccHHHHHHHhCCCcc
Confidence 3577888 9999 99999999999999999999999999999999999999999999999999999999998876652
Q ss_pred CCCCCCCCCcchhhhhhhhhCCCCCCcccccccccCCceeeeceecCCCceeecchhcHHHHHHHHhc-CCCCCcEeecH
Q 020229 80 PRYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGP 158 (329)
Q Consensus 80 ~r~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~f~~n~~y~~P~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~i~GP 158 (329)
+. ..++.+.|++. .+..|.|.|++++ ..+..+++++++++. +...|.++|||
T Consensus 494 --~~----------------------~~g~~~~~~~~-~~~~p~i~G~i~~--~~p~~ve~~~~l~~~t~~pvK~~l~GP 546 (755)
T 2nq5_A 494 --TT----------------------KFGWVQSYGSR-AVKPPIIYGDVQH--LEPITVEETVYAQSLTDRPVKGMLTGP 546 (755)
T ss_dssp --CC----------------------SSCCEEEETTE-EECCCEEEEEEEE--CSCSSHHHHHHHHHTCSSCBEEEEECH
T ss_pred --cc----------------------cCCcccccccc-CCCCCEecCCccC--CCCCHHHHHHHHHHhcCCCeEEEecCH
Confidence 10 11233445443 3567888887654 456689999999987 33457889999
Q ss_pred HHHHhhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCC-----hHH-HHHHHHHHHHHHcC
Q 020229 159 VSYLLLSKPAKGVAKTFSLLSLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLD-----SHK-LHAFIHSFRITNCG 232 (329)
Q Consensus 159 ~tl~~~~~~~~~y~~~~~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-----~~~-~~~~~~~~~~~~~~ 232 (329)
+|++.++.. ..+ .+.++++++++++|++++++|+++||++||||||++...+. .+. .+.+++++|.++++
T Consensus 547 ~Tl~~~~~~-r~~---~~~~el~~~lA~a~~~ei~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~ 622 (755)
T 2nq5_A 547 ITITNWSFE-RTD---IPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSS 622 (755)
T ss_dssp HHHHHHSBC-CSS---SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHhc-cCc---ccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhc
Confidence 999977664 333 27899999999999999999999999999999999876442 122 36678999999999
Q ss_pred CCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHH
Q 020229 233 VQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINK 312 (329)
Q Consensus 233 ~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~ 312 (329)
++.++.+++|+||||+.++++.|.++++|+|+||..+.+.++++.+.+ ...++.+++||||++++.+|++|+|++++++
T Consensus 623 v~~~~~i~~HiC~G~~~~i~~~L~~~~aD~islE~~rsd~e~L~~~~~-~~~~~~v~lGvvd~~s~~ve~~eeV~~ri~~ 701 (755)
T 2nq5_A 623 VKDETQIHTHMCYSKFDEIIDAIRALDADVISIETSRSHGDIIESFET-AVYPLGIGLGVYDIHSPRVPTKEEVVANIER 701 (755)
T ss_dssp SCTTSEEEEEECCSCCSTTHHHHHHHCCSEEEC--------------------CEEEEECSCTTSSCCCCHHHHHHHHHG
T ss_pred CCCCCeEEEEeccCCcHHHHHHHHhCCCCEEEEecCCCCHHHHHHHHh-ccCCCeEEEeeccCccCCCCCHHHHHHHHHH
Confidence 987789999999999999999999999999999977666777777653 1125789999999999999999999999999
Q ss_pred HHHhcCCCceEeCCCCC
Q 020229 313 MLAVLETNILWVNPDLH 329 (329)
Q Consensus 313 a~~~v~~~~l~ispdCG 329 (329)
+++++|++|+++|||||
T Consensus 702 a~~~v~~e~l~lsPdCG 718 (755)
T 2nq5_A 702 PLRQLSPTQFWVNPDCG 718 (755)
T ss_dssp GGGSSCGGGEEEECSSC
T ss_pred HHHhCCcccEEEeCCCC
Confidence 99999999999999998
No 11
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=99.77 E-value=2.5e-18 Score=162.85 Aligned_cols=184 Identities=14% Similarity=0.065 Sum_probs=138.0
Q ss_pred hhcHHHHHHHHhc-C-CCCCcEeecHHHHHh-hc--CCCCC-------ccCCCC-HHHHHHHHHHHHHHHHHHHHHCCCC
Q 020229 135 HKAVTEYKEAKGL-G-VETVPVLIGPVSYLL-LS--KPAKG-------VAKTFS-LLSLLPKILPIYKEVISELKAAGAS 201 (329)
Q Consensus 135 ~~~~~~~~~~~~~-~-~~~k~~i~GP~tl~~-~~--~~~~~-------y~~~~~-~~~l~~~la~~~~~~i~~l~~aG~~ 201 (329)
...++.++.+++. + ......+.||+|++. +. ...+. .|..++ .+++++.+++++.++++++.++||+
T Consensus 129 ~~~~ea~~~l~~~~~~~~l~g~~~~P~tla~~l~~gg~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad 208 (359)
T 2inf_A 129 PYVLETIKLLVNEQLNVPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAK 208 (359)
T ss_dssp HHHHHHHHHHHHHTCSSCEEEEEECHHHHHHHHHHCSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhCCcceEEEcCcHHHHHHHHHcCCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3456677777643 2 233445999999973 32 11112 122123 5689999999999999999999999
Q ss_pred eEEecCCccCCCCChHHHHHH-HHHHHHHHcCCCC-CceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHhh
Q 020229 202 WIQFDEPLLVMDLDSHKLHAF-IHSFRITNCGVQD-TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 279 (329)
Q Consensus 202 ~IQiDEP~l~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~ 279 (329)
.|||+||. +..++++.+++| .+.++++++.++. +.++++|+| |+ ..+++.+.++++|++++|+..+..+..+. .
T Consensus 209 ~i~i~D~~-~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~-G~-~~~l~~l~~~g~d~~~~d~~~d~~~~~~~-g 284 (359)
T 2inf_A 209 AIQIFDSW-VGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGV-GA-SHLAGDWHDLPLDVVGLDWRLGIDEARSK-G 284 (359)
T ss_dssp EEEEECTT-GGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECT-TC-GGGHHHHHTSSCSEEECCTTSCHHHHHHT-T
T ss_pred EEEEeCCc-cccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcC-Cc-HHHHHHHHHhCCCEEEeCCCCCHHHHHHc-C
Confidence 99999994 556888888655 5667777776642 356677766 98 77999999999999999987554333332 2
Q ss_pred hcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCC--CceEeCCCCC
Q 020229 280 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET--NILWVNPDLH 329 (329)
Q Consensus 280 ~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~--~~l~ispdCG 329 (329)
++.++.|++|+ +...+|+|+|+++++++++. +. ...++||+||
T Consensus 285 -----~~~~l~Gnldp-~~l~~t~e~I~~~v~~~l~~-~~~~~g~Il~~gcg 329 (359)
T 2inf_A 285 -----ITKTVQGNLDP-SILLAPWEVIEQKTKEILDQ-GMESDGFIFNLGHG 329 (359)
T ss_dssp -----CCSEEECCBCG-GGGGSCHHHHHHHHHHHHHH-HTTSSCEEBCBSSC
T ss_pred -----CCEEEEecCCh-HHhcCCHHHHHHHHHHHHHh-CCCCCCeEEeCCCC
Confidence 67899999999 56689999999999999999 76 4899999998
No 12
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=99.75 E-value=1.1e-18 Score=164.99 Aligned_cols=186 Identities=13% Similarity=0.047 Sum_probs=139.5
Q ss_pred hhcHHHHHHHHhc-C--CCCCcEeecHHHHHhhcC---CCCC-------ccCCCC-HHHHHHHHHHHHHHHHHHHHHCCC
Q 020229 135 HKAVTEYKEAKGL-G--VETVPVLIGPVSYLLLSK---PAKG-------VAKTFS-LLSLLPKILPIYKEVISELKAAGA 200 (329)
Q Consensus 135 ~~~~~~~~~~~~~-~--~~~k~~i~GP~tl~~~~~---~~~~-------y~~~~~-~~~l~~~la~~~~~~i~~l~~aG~ 200 (329)
+...+.++.+++. + ......+.||+|++.... .... .|..++ .+++++.+++++.++++++.++||
T Consensus 128 ~~v~e~~~~l~~~~~~~~~~~g~~~~P~tla~~l~~g~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGa 207 (353)
T 1j93_A 128 PYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGA 207 (353)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEECHHHHHHHHHHSBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCceEEEecChHHHHHHHHHcCCCcccHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3456777777643 2 223445999999883221 0111 122123 468999999999999999999999
Q ss_pred CeEEecCCccCCCCChHHHHHH-HHHHHHHHcCCCC---CceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHH
Q 020229 201 SWIQFDEPLLVMDLDSHKLHAF-IHSFRITNCGVQD---TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLS 276 (329)
Q Consensus 201 ~~IQiDEP~l~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~ 276 (329)
+.||++||. +..++++.+++| .+.++++++.++. +.+ ++|+|.| ...+++.+.++++|++++|+..+..+..+
T Consensus 208 d~iqi~D~~-~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~-~ih~c~g-~~~~l~~l~~~g~d~~~~d~~~d~~~~~~ 284 (353)
T 1j93_A 208 QAVQIFDSW-ATELSPVDFEEFSLPYLKQIVDSVKLTHPNLP-LILYASG-SGGLLERLPLTGVDVVSLDWTVDMADGRR 284 (353)
T ss_dssp SEEEEECGG-GGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCC-EEEECSS-CTTTGGGGGGGCCSEEECCTTSCHHHHHH
T ss_pred CEEEEeCcc-cccCCHHHHHHHhHHHHHHHHHHHHHhCCCCC-EEEECCC-hHHHHHHHHhcCCCEEEeCCCCCHHHHHH
Confidence 999999995 546788877654 4666666665531 344 4799955 45789999999999999998765555555
Q ss_pred HhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 277 VFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 277 ~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
.+. ++.++.|++|+ +...+|+|+|+++++++++.++..+.++||+||
T Consensus 285 ~~g-----~~~~l~Gnldp-~~l~~~~e~i~~~v~~~l~~~~~~g~I~~~g~g 331 (353)
T 1j93_A 285 RLG-----PNVAIQGNVDP-GVLFGSKEFITNRINDTVKKAGKGKHILNLGHG 331 (353)
T ss_dssp HTC-----SSSEEECCBCG-GGGGSCHHHHHHHHHHHHHHHCSSSEEBCBSSC
T ss_pred HcC-----CCeEEEecCCH-HHHcCCHHHHHHHHHHHHHHhCCCCEEEeCCCC
Confidence 554 57899999999 566899999999999999999888999999998
No 13
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=99.61 E-value=5.2e-15 Score=139.74 Aligned_cols=185 Identities=11% Similarity=0.037 Sum_probs=138.4
Q ss_pred hcHHHHHHHHhc-C--CCCCcEeecHHHHHhhcC---CCCC-------ccCCCC-HHHHHHHHHHHHHHHHHHHHHCCCC
Q 020229 136 KAVTEYKEAKGL-G--VETVPVLIGPVSYLLLSK---PAKG-------VAKTFS-LLSLLPKILPIYKEVISELKAAGAS 201 (329)
Q Consensus 136 ~~~~~~~~~~~~-~--~~~k~~i~GP~tl~~~~~---~~~~-------y~~~~~-~~~l~~~la~~~~~~i~~l~~aG~~ 201 (329)
..++.++.+++. + ......+.||+|++.... .... .+..++ .+++++.+++.+.+.++++.++|++
T Consensus 123 ~v~eai~~l~~~~~~~~plig~~~~P~tla~~l~~g~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad 202 (354)
T 3cyv_A 123 YVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQ 202 (354)
T ss_dssp HHHHHHHHHHHHTTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhCCCeeEEEeCCcHHHHHHHHhCCCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 356666666543 2 223344889999974321 0011 121122 4678999999999999999999999
Q ss_pred eEEecCCccCCCCChHHHHHH-HHHHHHHHcCCCC-----CceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHH
Q 020229 202 WIQFDEPLLVMDLDSHKLHAF-IHSFRITNCGVQD-----TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 275 (329)
Q Consensus 202 ~IQiDEP~l~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l 275 (329)
.||+.||. +..++++.+++| .+.++++++.+.. +.+ ++|.| |+...+++.+.++++|++++|+..+..+..
T Consensus 203 ~i~i~d~~-~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~~-~g~~~~l~~l~~~g~d~i~~d~~~dl~~~~ 279 (354)
T 3cyv_A 203 AVMIFDTW-GGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLFT-KGGGQWLEAMAETGCDALGLDWTTDIADAR 279 (354)
T ss_dssp EEEEECTT-GGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEEC-TTTTTTHHHHHTTSCSEEECCTTSCHHHHH
T ss_pred EEEEeCCc-cccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEEC-CCHHHHHHHHHhcCCCEEEeCCCCCHHHHH
Confidence 99999986 446888888665 5677888877753 234 68889 555789999999999999999766656666
Q ss_pred HHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCC-CceEeCCCCC
Q 020229 276 SVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET-NILWVNPDLH 329 (329)
Q Consensus 276 ~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~-~~l~ispdCG 329 (329)
+.+. ++.++.|++|+. ...+|+|+|+++++++++.++. ...+++|+||
T Consensus 280 ~~~g-----~~~~l~Gn~dp~-~l~~t~e~i~~~v~~~l~~~g~~~g~I~~~g~g 328 (354)
T 3cyv_A 280 RRVG-----NKVALQGNMDPS-MLYAPPARIEEEVATILAGFGHGEGHVFNLGHG 328 (354)
T ss_dssp HHHT-----TTSEEECCBCGG-GGGSCHHHHHHHHHHHHTTTTTSSCEEBCBSSC
T ss_pred HHhC-----CCeEEEecCChH-HhCCCHHHHHHHHHHHHHHhCCCCCeEEecCCC
Confidence 6665 678999999994 4589999999999999999875 5899999998
No 14
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=99.60 E-value=2.4e-15 Score=142.72 Aligned_cols=184 Identities=13% Similarity=0.075 Sum_probs=136.3
Q ss_pred cHHHHHHHHhc-C--CCCCcEeecHHHHHhhc---CCCCC-------ccCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCe
Q 020229 137 AVTEYKEAKGL-G--VETVPVLIGPVSYLLLS---KPAKG-------VAKTFS-LLSLLPKILPIYKEVISELKAAGASW 202 (329)
Q Consensus 137 ~~~~~~~~~~~-~--~~~k~~i~GP~tl~~~~---~~~~~-------y~~~~~-~~~l~~~la~~~~~~i~~l~~aG~~~ 202 (329)
..+.++.+++. + ......+.||+|++... ..... .+..++ ..++++.+++.+.+.++++.++|++.
T Consensus 134 v~eai~~l~~~~~~~~plig~~~~P~tla~~l~egg~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~ 213 (367)
T 1r3s_A 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQA 213 (367)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCccEEEEcCcHHHHHHHHHcCCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 45555555532 2 22233488999998432 11111 111122 36789999999999999999999999
Q ss_pred EEecCCccCCCCChHHHHHH-HHHHHHHHcCCC------C--CceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchh
Q 020229 203 IQFDEPLLVMDLDSHKLHAF-IHSFRITNCGVQ------D--TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEK 273 (329)
Q Consensus 203 IQiDEP~l~~~~~~~~~~~~-~~~~~~~~~~~~------~--~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~ 273 (329)
||+.|+. +..++++.+++| .+.++++++.+. + +.++++|+| |+ ..+++.+.++++|++++|+..+..+
T Consensus 214 i~i~D~~-~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~-G~-~~~l~~l~~~g~d~i~~d~~~dl~~ 290 (367)
T 1r3s_A 214 LQLFESH-AGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAK-DG-HFALEELAQAGYEVVGLDWTVAPKK 290 (367)
T ss_dssp EEEEETT-GGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEET-TC-GGGHHHHTTSSCSEEECCTTSCHHH
T ss_pred EEEecCc-cccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcC-Cc-HHHHHHHHhcCCCEEEeCCCCCHHH
Confidence 9999985 456788887655 344555555443 1 367889988 87 7799999999999999998766666
Q ss_pred HHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 274 LLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 274 ~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
..+.+. ++..+.|++|+ +....|+|+|++.++++++.++....+++++||
T Consensus 291 a~~~~g-----~~~~l~Gnldp-~~L~gt~e~i~~~v~~~l~~~g~~g~I~~~ghg 340 (367)
T 1r3s_A 291 ARECVG-----KTVTLQGNLDP-CALYASEEEIGQLVKQMLDDFGPHRYIANLGHG 340 (367)
T ss_dssp HHHHHC-----SSSEEEEEECG-GGGGSCHHHHHHHHHHHHHHHCSSSEEEEESSC
T ss_pred HHHHcC-----CCeEEEeCCCh-HHhcCCHHHHHHHHHHHHHHhCCCCeeecCCCC
Confidence 666665 57899999999 455799999999999999998778899999998
No 15
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=99.57 E-value=2.3e-14 Score=134.46 Aligned_cols=184 Identities=14% Similarity=0.111 Sum_probs=132.8
Q ss_pred hhcHHHHHHHHhc-C-CCCCcEeecHHHHHhhcC---CCCC-------ccCCCC-HHHHHHHHHHHHHHHHHHHHHCCCC
Q 020229 135 HKAVTEYKEAKGL-G-VETVPVLIGPVSYLLLSK---PAKG-------VAKTFS-LLSLLPKILPIYKEVISELKAAGAS 201 (329)
Q Consensus 135 ~~~~~~~~~~~~~-~-~~~k~~i~GP~tl~~~~~---~~~~-------y~~~~~-~~~l~~~la~~~~~~i~~l~~aG~~ 201 (329)
+...+..+.+++. + ......+.||+|++.... .... .+..++ .+++++.+++.+.+.++++.++|++
T Consensus 115 ~~v~eai~~l~~~~~~~plig~~~~P~tla~~l~egg~~~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad 194 (338)
T 2eja_A 115 AYVYEIIKRVKEAQDEVPVIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGAD 194 (338)
T ss_dssp HHHHHHHHHHHHHCCSSCEEEEEECHHHHHHHHHHTSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhcCccEEEecchHHHHHHHHHcCCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3455666666543 2 122234889999874321 1111 111122 4679999999999999999999999
Q ss_pred eEEecCCccCCCCChHHHHHH-HHHHHHHHcCCC--CCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCchhHHHHh
Q 020229 202 WIQFDEPLLVMDLDSHKLHAF-IHSFRITNCGVQ--DTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 278 (329)
Q Consensus 202 ~IQiDEP~l~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l 278 (329)
.||+.||..+ .++++.+++| .+.++++++.+. .+.++++|+| |+ ..+++.+.++++|++++|+..+..+..+.+
T Consensus 195 ~i~i~d~~~~-~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~-g~-~~~l~~l~~~g~d~~~~d~~~dl~~~~~~~ 271 (338)
T 2eja_A 195 VVQIFDSWVN-NLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFR-GS-SSFIDLAVDYRADALSVDWSVDIPELFKIY 271 (338)
T ss_dssp EEEEEETTGG-GSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEES-SH-HHHHHHHTTSCCSEEECCTTSCHHHHHHHC
T ss_pred EEEEecCccc-cCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcC-Cc-HHHHHHHHHcCCCEEEeCCCCCHHHHHHhC
Confidence 9999998654 5788877654 344555555442 1367777877 88 789999999999999999865444443332
Q ss_pred hhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCC-CceEeCCCCC
Q 020229 279 REGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET-NILWVNPDLH 329 (329)
Q Consensus 279 ~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~-~~l~ispdCG 329 (329)
+..+.|++|+ +....|+|+|++.++++++.++. ...+++++||
T Consensus 272 -------~~~l~Gn~dp-~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~g~g 315 (338)
T 2eja_A 272 -------DKGFQGNLEP-AVLYASEEVIEEKTLGLLRRIPVKTRYVFNLGHG 315 (338)
T ss_dssp -------CSEEECCBCG-GGGGSCHHHHHHHHHHHHTTCCCSSSEEBCBSSC
T ss_pred -------CeEEEECCCH-HHhcCCHHHHHHHHHHHHHHhCCCCCeEEeCCCC
Confidence 4789999999 45579999999999999999876 6899999998
No 16
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=99.49 E-value=4.4e-13 Score=126.28 Aligned_cols=182 Identities=18% Similarity=0.175 Sum_probs=133.6
Q ss_pred hcHHHHHHHHhc-CCCCCcE---eecHHHHHhhcCCCCC----ccCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCeEEec
Q 020229 136 KAVTEYKEAKGL-GVETVPV---LIGPVSYLLLSKPAKG----VAKTFS-LLSLLPKILPIYKEVISELKAAGASWIQFD 206 (329)
Q Consensus 136 ~~~~~~~~~~~~-~~~~k~~---i~GP~tl~~~~~~~~~----y~~~~~-~~~l~~~la~~~~~~i~~l~~aG~~~IQiD 206 (329)
..++..+.+++. +. .+|+ +-||+|++......+. .+..++ ..++++.+++++.+.++++.++|++.|||-
T Consensus 132 ~v~eai~~l~~~l~~-~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~ 210 (348)
T 4ay7_A 132 VVLEAIKIIREKVGP-DVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIA 210 (348)
T ss_dssp HHHHHHHHHHHHHCT-TSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHhCC-CeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceee
Confidence 345666666543 32 2443 8899999733221111 111112 467888999999999999999999999999
Q ss_pred CCccCC-CCChHHHHHH-HHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCCc-hhHHHHhhhccc
Q 020229 207 EPLLVM-DLDSHKLHAF-IHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSD-EKLLSVFREGVK 283 (329)
Q Consensus 207 EP~l~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~~-~~~l~~l~~~~~ 283 (329)
|+..+. .++++.+++| .+.++++.+.++ ...++|+| |+...+++.+.++++|++++|..... .+..+.+.
T Consensus 211 D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~--~~~iih~~-g~~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g---- 283 (348)
T 4ay7_A 211 DPVASPDLMSPDSFRQFLKSRLQKFASSVN--SVTVLHIC-GNVNPILSDMADCGFEGLSVEEKIGSAKKGKEVIG---- 283 (348)
T ss_dssp CGGGSTTTSCHHHHHHHHHHHHHHHHHHSS--SEEEEECC-SCCHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHT----
T ss_pred ccccccccCCHHHHHHHhhHHHHHHHhhcc--CCcEEEec-CCcHHHHHHHHHhccccccccchhhHHHHHHHHhC----
Confidence 998664 3688888665 466788888776 34579999 99999999999999999999976543 34444554
Q ss_pred CCCeeeeeeecCC-CCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 284 YGAGIGPGVYDIH-SPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 284 ~~~~i~~Gvvd~~-~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
++..+.|++|+. .....++|+|++.++++++. ..-+++++||
T Consensus 284 -~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~~---~g~I~~~Ghg 326 (348)
T 4ay7_A 284 -TRARLVGNVSSPFTLLPGPVDKIKAEAKEALEG---GIDVLAPGCG 326 (348)
T ss_dssp -TSSEEEEEECCCCCCTTCCHHHHHHHHHHHHHT---TCSEEEESSS
T ss_pred -CCEEEEcCCCChHhhcCCCHHHHHHHHHHHHhC---CCCEEeCCCc
Confidence 567788999975 45678999999999999973 3457899998
No 17
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=99.47 E-value=4.1e-13 Score=127.35 Aligned_cols=185 Identities=10% Similarity=0.029 Sum_probs=137.4
Q ss_pred hcHHHHHHHHhc-CCC----CCcE---eecHHHHHh-hcC--CCCCc-------cCCCC-HHHHHHHHHHHHHHHHHHHH
Q 020229 136 KAVTEYKEAKGL-GVE----TVPV---LIGPVSYLL-LSK--PAKGV-------AKTFS-LLSLLPKILPIYKEVISELK 196 (329)
Q Consensus 136 ~~~~~~~~~~~~-~~~----~k~~---i~GP~tl~~-~~~--~~~~y-------~~~~~-~~~l~~~la~~~~~~i~~l~ 196 (329)
..++..+.+++. +.. ..|+ +-||+|++. +.. ....+ +..++ .+++++.+++.+.+.++++.
T Consensus 128 ~v~eai~~l~~~l~~~~~~~~vpligf~gaP~Tla~~l~~g~~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~y~~~qi 207 (368)
T 4exq_A 128 YVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQI 207 (368)
T ss_dssp HHHHHHHHHHHHTBCTTSCBSSCEEEEEECHHHHHHHHHHTBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcCcccceeEEEeCCcHHHHHHHHHcCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666543 320 2444 789999974 221 11111 11112 47789999999999999999
Q ss_pred HCCCCeEEecCCccCCCCChHHHHHH-HHHHHHHHcCCCC-----CceeEEeecccChHHHHHHHHhCCCcEEEEEcCCC
Q 020229 197 AAGASWIQFDEPLLVMDLDSHKLHAF-IHSFRITNCGVQD-----TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 197 ~aG~~~IQiDEP~l~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
++|++.||+-|+. +..++++.+++| .+.++++++.++. ..+++.|+| |. ..+++.+.++++|++++|+..+
T Consensus 208 ~aGad~i~ifDs~-~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~-g~-~~~l~~l~~~g~d~i~~d~~~d 284 (368)
T 4exq_A 208 EAGAQAVMIFDTW-GGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK-GG-GLWLEDLAATGVDAVGLDWTVN 284 (368)
T ss_dssp HHTCSEEEEEETT-GGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET-TC-GGGHHHHHTSSCSEEECCTTSC
T ss_pred HhCCCEEEEeCCc-cccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC-Cc-HHHHHHHHHhCCCEEeeCCCCC
Confidence 9999999987765 556888888765 4667888887764 256655555 75 5689999999999999998877
Q ss_pred chhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCC-CceEeCCCCC
Q 020229 271 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET-NILWVNPDLH 329 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~-~~l~ispdCG 329 (329)
..+..+.+. ++..+.|++|+... ..++|+|.+.++++++..+. ...+++++||
T Consensus 285 l~~ak~~~g-----~~~~l~Gnldp~~L-~gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghg 338 (368)
T 4exq_A 285 LGRARERVA-----GRVALQGNLDPTIL-FAPPEAIRAEARAVLDSYGNHPGHVFNLGHG 338 (368)
T ss_dssp HHHHHHHHT-----TSSEEEEEECGGGG-GSCHHHHHHHHHHHHHHHCSCSCEEEEESSC
T ss_pred HHHHHHHhC-----CCEEEEECCCHHHh-CCCHHHHHHHHHHHHHHhCCCCCEEEeCCCC
Confidence 677777776 56788999999754 79999999999999999874 6799999998
No 18
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=93.66 E-value=2.5 Score=37.84 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=78.2
Q ss_pred HHHHHHHHHCCCCeEEecCCcc---CCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLL---VMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~ 264 (329)
.+.++.+.+.|+++|-|---+- +...+ .++++.+.++++.+.+.. +.++.+++.. ..++..-++.+++.+.
T Consensus 41 ~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~--~~piSIDT~~---~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 41 VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF--EVWISVDTSK---PEVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC--CCEEEEECCC---HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc--CCeEEEeCCC---HHHHHHHHHcCCCEEE
Confidence 3346778889999999885221 11233 466778888888876544 3788888883 3467777777888664
Q ss_pred EEcCCCchhHHHHhhhcccCCCeeeeeeec--CCCC----CCCC-----HHHHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 265 IENSRSDEKLLSVFREGVKYGAGIGPGVYD--IHSP----RIPS-----TEEIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 265 lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd--~~~~----~~e~-----~e~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
==......+.++..++ .+..+++=-.. +++. ..++ .+.+.+++++|.+. ++++++++.|..|
T Consensus 116 dvsg~~d~~~~~~~a~---~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~g 189 (282)
T 1aj0_A 116 DIRSLSEPGALEAAAE---TGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFG 189 (282)
T ss_dssp ETTTTCSTTHHHHHHH---HTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred ECCCCCCHHHHHHHHH---hCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCC
Confidence 2111133456666664 23333332211 1111 1111 55666677777643 3567999999765
No 19
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=93.11 E-value=3.4 Score=36.87 Aligned_cols=130 Identities=12% Similarity=0.115 Sum_probs=74.5
Q ss_pred HHHHHHHHCCCCeEEecC----CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDE----PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE----P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
+.++.+.+.|+++|-|-- |....-...+++++++++++.+.+. +.++.+++.. ..++..-++.+++.+.
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~---~~piSIDT~~---~~va~aAl~aGa~iIN- 105 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ---GITVSIDTMR---ADVARAALQNGAQMVN- 105 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT---TCCEEEECSC---HHHHHHHHHTTCCEEE-
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC---CCEEEEeCCC---HHHHHHHHHcCCCEEE-
Confidence 346778899999998884 2211111246677888888887653 4778888883 3467777778887664
Q ss_pred EcCC--CchhHHHHhhhcccCCCeeeeeeec--CCC-----CCCCC-----HHHHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 266 ENSR--SDEKLLSVFREGVKYGAGIGPGVYD--IHS-----PRIPS-----TEEIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 266 E~~~--~~~~~l~~l~~~~~~~~~i~~Gvvd--~~~-----~~~e~-----~e~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
+... ...+.++.+++ .+..+++--.. +++ +..++ .+.+.+++++|.+. ++++++++.|..|
T Consensus 106 dvsg~~~d~~m~~~~a~---~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~G 181 (280)
T 1eye_A 106 DVSGGRADPAMGPLLAE---ADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLG 181 (280)
T ss_dssp ETTTTSSCTTHHHHHHH---HTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred ECCCCCCCHHHHHHHHH---hCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCC
Confidence 3221 13456767664 24433332221 112 11122 55666677777653 3567999999765
No 20
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=92.99 E-value=0.52 Score=41.22 Aligned_cols=78 Identities=12% Similarity=0.171 Sum_probs=47.2
Q ss_pred HHHHHHHHHCCCCeEEecC------CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcE
Q 020229 189 KEVISELKAAGASWIQFDE------PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 262 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDE------P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~ 262 (329)
.++++.+.++|++++|+|. |.++.. ...+ +.+++..+.-+|+.--|....++.+.++++|+
T Consensus 29 ~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G--~~~v-----------~~lr~~~~~DvhLMv~~p~~~i~~~~~aGAd~ 95 (237)
T 3cu2_A 29 NEEVTTLLENQINVLHFDIADGQFSSLFTVG--AIGI-----------KYFPTHCFKDVHLMVRNQLEVAKAVVANGANL 95 (237)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC--THHH-----------HTSCTTSEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEEEecCccccchhhh--HHHH-----------HHHhhhCCCCeEEEEECHHHHHHHHHHcCCCE
Confidence 3456678889999999995 433322 2222 12221122267886567777889999999999
Q ss_pred --EEEEcCCCchhHHHHhh
Q 020229 263 --ITIENSRSDEKLLSVFR 279 (329)
Q Consensus 263 --~~lE~~~~~~~~l~~l~ 279 (329)
++.|......+.++.++
T Consensus 96 itvH~ea~~~~~~~i~~i~ 114 (237)
T 3cu2_A 96 VTLQLEQYHDFALTIEWLA 114 (237)
T ss_dssp EEEETTCTTSHHHHHHHHT
T ss_pred EEEecCCcccHHHHHHHHH
Confidence 44444433345555554
No 21
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=92.99 E-value=0.57 Score=43.62 Aligned_cols=109 Identities=11% Similarity=0.099 Sum_probs=65.8
Q ss_pred CChHHHHHHHHHHHHHHcCCCCCceeEEeec-ccC-hHHHHHHHHhCCCc--EEEEEcCC----CchhHHHHhhhcccCC
Q 020229 214 LDSHKLHAFIHSFRITNCGVQDTTQIHTHMC-YSN-FNDIIHSIIDMDAD--VITIENSR----SDEKLLSVFREGVKYG 285 (329)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C-~Gn-~~~i~~~l~~~~~d--~~~lE~~~----~~~~~l~~l~~~~~~~ 285 (329)
+++.+.+.|....+.+.+ . +.+|++|+. +|+ ..+++..|.+.+++ .+.+-... +.....+.++. |
T Consensus 184 ~t~~q~~~f~aq~~~A~~-~--glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~----G 256 (364)
T 3k2g_A 184 FTAEEEKSLRGAARAQVR-T--GLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR----G 256 (364)
T ss_dssp CCHHHHHHHHHHHHHHHH-H--CCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHHHHH-H--CCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC----C
Confidence 345555555555544432 2 356899974 443 45678877776554 44443332 22344555542 6
Q ss_pred CeeeeeeecCCCC------CCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 286 AGIGPGVYDIHSP------RIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 286 ~~i~~Gvvd~~~~------~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
-.+.++-+-+... ...+-+.-++.++++++.++.+|+.+++||.
T Consensus 257 ~~I~f~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p 306 (364)
T 3k2g_A 257 AFLEFDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVF 306 (364)
T ss_dssp CEEEECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred cEEEecCCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCC
Confidence 6676665432110 1345566788999999999999999999984
No 22
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=92.46 E-value=1.8 Score=40.18 Aligned_cols=142 Identities=9% Similarity=0.076 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHH-HCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc-c-ChHHHHHHHHhC
Q 020229 182 PKILPIYKEVISELK-AAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY-S-NFNDIIHSIIDM 258 (329)
Q Consensus 182 ~~la~~~~~~i~~l~-~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~-G-n~~~i~~~l~~~ 258 (329)
++|++.+..++.... ..|++...|=|-.+...++..+.+.|....+... ..+ +.+|++|+.+ | ...+++..|.+.
T Consensus 140 ~~L~~~~~~ei~~gi~~t~vkag~IGEiGld~~~t~~q~~~f~aq~~~A~-~~~-glPV~iH~~r~~~a~~e~l~iL~e~ 217 (365)
T 3rhg_A 140 DAMAKMIDDELNIGIDGTDIRAGMIGEIGVSPFFTDGEKNSLRAAALAQN-NNP-YASMNIHMPGWQRRGDEVLDILLTE 217 (365)
T ss_dssp HHHHHHHHHHHHTCSTTSSCCCCEEEEEECCTTCCHHHHHHHHHHHHHHT-TCT-TCEEEEECCTTSCCHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhccccCCceeEEEEEEEcCCCCCHHHHHHHHHHHHHHH-Hhc-CCcEEEECCCCCcCHHHHHHHHHhc
Confidence 556555555443221 1233332232323332345555555555544443 331 3689999743 2 345678888765
Q ss_pred -CCc--EEEEEcCC---Cc-hhHHHHhhhcccCCCeeeeeeecCCCCC-----CCCHHHHHHHHHHHHHhcCCCceEeCC
Q 020229 259 -DAD--VITIENSR---SD-EKLLSVFREGVKYGAGIGPGVYDIHSPR-----IPSTEEIADRINKMLAVLETNILWVNP 326 (329)
Q Consensus 259 -~~d--~~~lE~~~---~~-~~~l~~l~~~~~~~~~i~~Gvvd~~~~~-----~e~~e~i~~ri~~a~~~v~~~~l~isp 326 (329)
+++ .+.+-... .. ....+++. .|-.+.++-+-...+. ..+-+.-++.++++++..+.+|+.+++
T Consensus 218 ~~~~~~~vvi~H~~rs~~~~e~a~~~l~----~G~~I~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleT 293 (365)
T 3rhg_A 218 MGCDPAKISLAHSDPSGKDIDYQCKMLD----RGVWLEFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSH 293 (365)
T ss_dssp TCCCGGGEEESCCGGGTTCHHHHHHHHH----TTCEEEECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECC
T ss_pred cCCCCCceEEecCCCCCCCHHHHHHHHh----CCCEEEecCCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeC
Confidence 554 45444332 22 34455554 3667776654110011 234556778899999999999999999
Q ss_pred CCC
Q 020229 327 DLH 329 (329)
Q Consensus 327 dCG 329 (329)
||+
T Consensus 294 D~p 296 (365)
T 3rhg_A 294 DVF 296 (365)
T ss_dssp CCC
T ss_pred CCC
Confidence 985
No 23
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.44 E-value=0.44 Score=41.82 Aligned_cols=69 Identities=13% Similarity=-0.004 Sum_probs=41.8
Q ss_pred HHHHHCCCCeEEecCCccC-----CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEc
Q 020229 193 SELKAAGASWIQFDEPLLV-----MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 193 ~~l~~aG~~~IQiDEP~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~ 267 (329)
+++.+.|+++||+-|+... ..++..++.+....+..+++.. ++++++|-- ++.-..+++|++++..
T Consensus 50 ~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~--~~~liInd~-------~~lA~~~gAdGVHLg~ 120 (243)
T 3o63_A 50 EAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRY--GALFAVNDR-------ADIARAAGADVLHLGQ 120 (243)
T ss_dssp HHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHT--TCEEEEESC-------HHHHHHHTCSEEEECT
T ss_pred HHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhh--CCEEEEeCH-------HHHHHHhCCCEEEecC
Confidence 3456789999999999732 1234444433334445555443 256667633 3445567888888886
Q ss_pred CCC
Q 020229 268 SRS 270 (329)
Q Consensus 268 ~~~ 270 (329)
...
T Consensus 121 ~dl 123 (243)
T 3o63_A 121 RDL 123 (243)
T ss_dssp TSS
T ss_pred CcC
Confidence 543
No 24
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.37 E-value=1.7 Score=39.31 Aligned_cols=131 Identities=13% Similarity=0.176 Sum_probs=77.2
Q ss_pred HHHHHHHHHHCCCCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcE
Q 020229 188 YKEVISELKAAGASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 262 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~ 262 (329)
..+.++.+.+.|+++|.|-- |... ..+ .++++++.++++.+.+.. +.++.+.++. ..++..-++.+++.
T Consensus 65 a~~~a~~~v~~GAdiIDIGgeStrPga~-~v~~~eE~~RvvpvI~~l~~~~--~vpiSIDT~~---~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 65 AVRHAKEMRDEGAHIIDIGGESTRPGFA-KVSVEEEIKRVVPMIQAVSKEV--KLPISIDTYK---AEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEESCC----CC-CCCHHHHHHHHHHHHHHHHHHS--CSCEEEECSC---HHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHhcC--CceEEEeCCC---HHHHHHHHHcCCCE
Confidence 34456778899999999984 3222 233 456777887777776544 3678888883 34566667778887
Q ss_pred EEEEcCC--CchhHHHHhhhcccCCCeeeeeeecCCCCCCCC-----HHHHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 263 ITIENSR--SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPS-----TEEIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 263 ~~lE~~~--~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~-----~e~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
+ -+... ...+.++.+++ .+..+++--.. ..+..++ .+.+.++++.|.+. ++++++++.|..|
T Consensus 139 I-Ndvsg~~~d~~m~~~aa~---~g~~vVlmh~~-G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~G 208 (297)
T 1tx2_A 139 I-NDIWGAKAEPKIAEVAAH---YDVPIILMHNR-DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIG 208 (297)
T ss_dssp E-EETTTTSSCTHHHHHHHH---HTCCEEEECCC-SCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred E-EECCCCCCCHHHHHHHHH---hCCcEEEEeCC-CCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCC
Confidence 7 34332 23466666664 24333332221 1122111 34555566666543 3457999999875
No 25
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=91.70 E-value=1.8 Score=39.45 Aligned_cols=120 Identities=13% Similarity=-0.030 Sum_probs=66.8
Q ss_pred CeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeec---ccChHHHHHHHHhCCCc--EEEEEcCC--C-ch
Q 020229 201 SWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMC---YSNFNDIIHSIIDMDAD--VITIENSR--S-DE 272 (329)
Q Consensus 201 ~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C---~Gn~~~i~~~l~~~~~d--~~~lE~~~--~-~~ 272 (329)
+++.| |..+....++.+.+.|...++.+.+ . +.++.+|+- +.-. +++..|.+.+++ .+.+..+. . ..
T Consensus 130 k~~ai-EiGld~~~~~~q~~~f~~q~~lA~~-~--glPv~iH~~~~~r~a~-e~l~iL~~~g~~~~~~~i~H~f~~~~~e 204 (330)
T 2ob3_A 130 RAGII-KVATTGKATPFQELVLKAAARASLA-T--GVPVTTHTAASQRDGE-QQAAIFESEGLSPSRVCIGHSDDTDDLS 204 (330)
T ss_dssp CCSEE-EEECSSSCCHHHHHHHHHHHHHHHH-H--CCCEEEECCGGGTHHH-HHHHHHHHTTCCGGGEEECSGGGCCCHH
T ss_pred ceeEE-EEeCCCCCCHHHHHHHHHHHHHHHH-h--CCeEEEECCCCCCCHH-HHHHHHHHcCcCcccEEEeCCCCCCCHH
Confidence 44555 5544422344444555555444432 2 257899984 2223 567767666653 44555442 2 23
Q ss_pred hHHHHhhhcccCCCeeeeeeecCCCC------------CCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 273 KLLSVFREGVKYGAGIGPGVYDIHSP------------RIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 273 ~~l~~l~~~~~~~~~i~~Gvvd~~~~------------~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
...+.+. .|-.+.++.+-..+. .+.+.+.-.+.++++++.++.+++.+++||+
T Consensus 205 ~a~~~~~----~G~~i~~~~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p 269 (330)
T 2ob3_A 205 YLTALAA----RGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWT 269 (330)
T ss_dssp HHHHHHH----TTCEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred HHHHHHh----CCCEEEeCCCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 4444444 366666653221111 0123345567799999999999999999985
No 26
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=91.64 E-value=1.8 Score=38.00 Aligned_cols=84 Identities=21% Similarity=0.271 Sum_probs=50.2
Q ss_pred HHHHHHHHHHCCCCeEEecCCc--cCCCC--ChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEE
Q 020229 188 YKEVISELKAAGASWIQFDEPL--LVMDL--DSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 263 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~--l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~ 263 (329)
+.++++.+.++|++++++|=.. +...+ .+..+ +++++.. + +.++-+|+-.-|+...++.+.++++|.+
T Consensus 42 L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v----~~lr~~~---p-~~~ldvHLmv~~p~~~i~~~~~aGAd~i 113 (246)
T 3inp_A 42 LGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVL----KALRDYG---I-TAGMDVHLMVKPVDALIESFAKAGATSI 113 (246)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHH----HHHHHHT---C-CSCEEEEEECSSCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHH----HHHHHhC---C-CCeEEEEEeeCCHHHHHHHHHHcCCCEE
Confidence 4456777889999999999322 22122 23333 3333332 1 2455666665677777888899999999
Q ss_pred EEEcCC--CchhHHHHhh
Q 020229 264 TIENSR--SDEKLLSVFR 279 (329)
Q Consensus 264 ~lE~~~--~~~~~l~~l~ 279 (329)
++=... ...+.++.++
T Consensus 114 tvH~Ea~~~~~~~i~~ir 131 (246)
T 3inp_A 114 VFHPEASEHIDRSLQLIK 131 (246)
T ss_dssp EECGGGCSCHHHHHHHHH
T ss_pred EEccccchhHHHHHHHHH
Confidence 886432 2234454554
No 27
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=91.55 E-value=2.2 Score=36.76 Aligned_cols=73 Identities=16% Similarity=0.240 Sum_probs=42.7
Q ss_pred HHHHHHHHHCCCCeEEecCCccCC--CCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVM--DLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE 266 (329)
.++++.+.++|+++||+|...-.+ .++.. . ... +.+.+.. +.++.+|+---|....++.+.++++|++++=
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g-~-~~v---~~lr~~~--~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh 92 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIG-P-LIV---DAIRPLT--KKTLDVHLMIVEPEKYVEDFAKAGADIISVH 92 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBC-H-HHH---HHHGGGC--CSEEEEEEESSSGGGTHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhh-H-HHH---HHHHhhc--CCcEEEEEEccCHHHHHHHHHHcCCCEEEEC
Confidence 345667888999999999732111 11110 0 112 2222211 2466777765565556888899999999655
Q ss_pred cC
Q 020229 267 NS 268 (329)
Q Consensus 267 ~~ 268 (329)
..
T Consensus 93 ~e 94 (230)
T 1tqj_A 93 VE 94 (230)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 28
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=91.42 E-value=3.9 Score=35.98 Aligned_cols=127 Identities=19% Similarity=0.184 Sum_probs=66.0
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeeccc-----Ch-------HHHHHHHHhCC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-----NF-------NDIIHSIIDMD 259 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-----n~-------~~i~~~l~~~~ 259 (329)
++.+.+.|+|+|.+-==.|....+.+.+......++.....+| .+-+|+- .+ ..++..+.+.+
T Consensus 38 a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lP-----iI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~ 112 (258)
T 4h3d_A 38 AKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIP-----LLFTFRSVVEGGEKLISRDYYTTLNKEISNTG 112 (258)
T ss_dssp HHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSC-----EEEECCCGGGTCSCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCC-----EEEEEechhhCCCCCCCHHHHHHHHHHHHhcC
Confidence 3455678999876652122221122333333333333333343 5788873 21 24566666665
Q ss_pred -CcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCC-CCCCCHHHHHHHHHHHHHhcCC--CceEeCCC
Q 020229 260 -ADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHS-PRIPSTEEIADRINKMLAVLET--NILWVNPD 327 (329)
Q Consensus 260 -~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~-~~~e~~e~i~~ri~~a~~~v~~--~~l~ispd 327 (329)
+|.+.+|+........+.+......+..++ +|.|+ ....+.+++..++.++.+. ++ =++.+.|+
T Consensus 113 ~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI---~S~Hdf~~TP~~~el~~~~~~~~~~-gaDIvKia~~~~ 180 (258)
T 4h3d_A 113 LVDLIDVELFMGDEVIDEVVNFAHKKEVKVI---ISNHDFNKTPKKEEIVSRLCRMQEL-GADLPKIAVMPQ 180 (258)
T ss_dssp CCSEEEEEGGGCHHHHHHHHHHHHHTTCEEE---EEEEESSCCCCHHHHHHHHHHHHHT-TCSEEEEEECCS
T ss_pred CchhhHHhhhccHHHHHHHHHHHHhCCCEEE---EEEecCCCCCCHHHHHHHHHHHHHh-CCCEEEEEEccC
Confidence 899999987643322222211001233342 34443 2356678999999888654 43 35556654
No 29
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=90.56 E-value=2.1 Score=39.36 Aligned_cols=124 Identities=15% Similarity=0.072 Sum_probs=71.9
Q ss_pred CCCCeEEecCCccCC-CCChHHHHHHHHHHHHHHcCCCCCceeEEeecccC-hHHHHHHHHhCCCc--EEEEEcCC--C-
Q 020229 198 AGASWIQFDEPLLVM-DLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSN-FNDIIHSIIDMDAD--VITIENSR--S- 270 (329)
Q Consensus 198 aG~~~IQiDEP~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn-~~~i~~~l~~~~~d--~~~lE~~~--~- 270 (329)
.|.+...| |-.+.+ .++..+.+.|...++.+.+ . +.++++|+-.|. ..+.++.|.+.+++ .+.+-.+. .
T Consensus 151 tg~k~g~I-Eigld~~~~~~~q~~~f~aq~~lA~~-~--glPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~ 226 (339)
T 3gtx_A 151 TGIRAGVI-KLASSRDAITPYEQLFFRAAARVQRE-T--GVPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTD 226 (339)
T ss_dssp SSCCCSEE-EEECCSSCCCHHHHHHHHHHHHHHHH-H--CCCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCC
T ss_pred cCcccceE-EEEcCCCCCCHHHHHHHHHHHHHHHH-H--CCeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCC
Confidence 34444555 655554 3455555666666555543 2 357899996442 22467777776554 44444332 2
Q ss_pred chhHHHHhhhcccCCCeeeeeeecCCCC-CCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 271 DEKLLSVFREGVKYGAGIGPGVYDIHSP-RIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~Gvvd~~~~-~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
.....+++. .|-.+.++-+.+... ...+-..-.+.++++++..+.+|+.+++||.
T Consensus 227 ~e~a~~~l~----~G~~i~~~g~~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p 282 (339)
T 3gtx_A 227 PAYHRETLR----HGVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSI 282 (339)
T ss_dssp HHHHHHHHT----TTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCE
T ss_pred HHHHHHHHH----cCcEEEEccCccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCC
Confidence 234444444 366777755432111 1123224567889999999999999999984
No 30
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=90.09 E-value=0.97 Score=44.39 Aligned_cols=66 Identities=11% Similarity=0.020 Sum_probs=42.7
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
++++.+.|+++||+.++.+.. .++......+..+++.. ++++++|-. ++.-.++++|++|+.....
T Consensus 31 ve~al~~Gv~~vQlR~K~~~~----~~~~~~a~~l~~l~~~~--~v~liIND~-------~dlA~~~gAdGVHLgq~dl 96 (540)
T 3nl6_A 31 VEAGLQNGVTLVQIREKDADT----KFFIEEALQIKELCHAH--NVPLIINDR-------IDVAMAIGADGIHVGQDDM 96 (540)
T ss_dssp HHHHHHTTCSEEEECCSSSCT----THHHHHHHHHHHHHHHT--TCCEEECSC-------SHHHHHTTCSEEEECTTSS
T ss_pred HHHHHHCCCCEEEEecCCCCH----HHHHHHHHHHHHHHHhc--CCEEEEeCc-------HHHHHHcCCCEEEEChhhc
Confidence 455668899999999997642 33333333444445433 256677643 4556678999999987654
No 31
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=90.00 E-value=11 Score=34.18 Aligned_cols=129 Identities=9% Similarity=0.173 Sum_probs=73.0
Q ss_pred HHHHHHHHCCCCeEEecC-CccCC------CCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCc
Q 020229 190 EVISELKAAGASWIQFDE-PLLVM------DLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE-P~l~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d 261 (329)
+.++.+.+.|+++|-|-- .+-.. .++ .++++.+.++++.+.+.. +.++.+-+.. + .++..-++.+++
T Consensus 53 ~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--~vpISIDT~~--~-~Va~aAl~aGa~ 127 (314)
T 3tr9_A 53 RTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--PQLISVDTSR--P-RVMREAVNTGAD 127 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC--CSEEEEECSC--H-HHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC--CCeEEEeCCC--H-HHHHHHHHcCCC
Confidence 346678899999998873 22111 122 355667777777776543 3666666662 3 466666777887
Q ss_pred EEEEEcCC-CchhHHHHhhhcccCCCeeeeeeecCC-CCC-C----------CCHHHHHHHHHHHHHh-cCCCceEeCCC
Q 020229 262 VITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIH-SPR-I----------PSTEEIADRINKMLAV-LETNILWVNPD 327 (329)
Q Consensus 262 ~~~lE~~~-~~~~~l~~l~~~~~~~~~i~~Gvvd~~-~~~-~----------e~~e~i~~ri~~a~~~-v~~~~l~ispd 327 (329)
.+. +... ...+.++.+++ .+..+++ ...+ .+. . |-.+.+.+++++|.+. |+++++++.|.
T Consensus 128 iIN-DVsg~~~~~m~~v~a~---~g~~vVl--Mh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG 201 (314)
T 3tr9_A 128 MIN-DQRALQLDDALTTVSA---LKTPVCL--MHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPG 201 (314)
T ss_dssp EEE-ETTTTCSTTHHHHHHH---HTCCEEE--ECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred EEE-ECCCCCchHHHHHHHH---hCCeEEE--ECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCC
Confidence 553 3332 23356666664 2433442 2221 221 1 1244555666666544 45579999997
Q ss_pred CC
Q 020229 328 LH 329 (329)
Q Consensus 328 CG 329 (329)
.|
T Consensus 202 ~G 203 (314)
T 3tr9_A 202 FG 203 (314)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 32
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=89.66 E-value=1.1 Score=38.94 Aligned_cols=20 Identities=30% Similarity=0.644 Sum_probs=15.8
Q ss_pred HHHHHHHHHHCCCCeEEecC
Q 020229 188 YKEVISELKAAGASWIQFDE 207 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDE 207 (329)
+.++++.+.++|++|+++|-
T Consensus 20 l~~~i~~~~~~g~d~iHvDv 39 (227)
T 1tqx_A 20 LAEETQRMESLGAEWIHLDV 39 (227)
T ss_dssp HHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEE
Confidence 34456778889999999995
No 33
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=89.03 E-value=12 Score=33.48 Aligned_cols=129 Identities=12% Similarity=0.154 Sum_probs=74.8
Q ss_pred HHHHHHHHCCCCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEE
Q 020229 190 EVISELKAAGASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~ 264 (329)
+.++.+.+.|+++|-|-- |... .++ .++++.+.++++.+.+. +.++.+-+.. . .++..-++.+++.+.
T Consensus 50 ~~a~~~v~~GAdiIDIGgeSTrPga~-~v~~~eE~~Rv~pvi~~l~~~---~vpiSIDT~~--~-~Va~aAl~aGa~iIN 122 (294)
T 2y5s_A 50 RRAERMIAEGADLLDIGGESTRPGAP-PVPLDEELARVIPLVEALRPL---NVPLSIDTYK--P-AVMRAALAAGADLIN 122 (294)
T ss_dssp HHHHHHHHTTCSEEEEESSCCSTTCC-CCCHHHHHHHHHHHHHHHGGG---CSCEEEECCC--H-HHHHHHHHHTCSEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHhhC---CCeEEEECCC--H-HHHHHHHHcCCCEEE
Confidence 345678899999999885 3322 234 45678888888887653 3666666652 3 466666777887653
Q ss_pred EEcCC-CchhHHHHhhhcccCCCeeeeeeec--CCC-----CCCCC-----HHHHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 265 IENSR-SDEKLLSVFREGVKYGAGIGPGVYD--IHS-----PRIPS-----TEEIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 265 lE~~~-~~~~~l~~l~~~~~~~~~i~~Gvvd--~~~-----~~~e~-----~e~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
+... ...+.++..++ .+..+++--.. +++ +..++ .+.+.+++++|.+. ++++++++.|..|
T Consensus 123 -dVsg~~d~~m~~~~a~---~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~G 197 (294)
T 2y5s_A 123 -DIWGFRQPGAIDAVRD---GNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFG 197 (294)
T ss_dssp -ETTTTCSTTHHHHHSS---SSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred -ECCCCCchHHHHHHHH---hCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCc
Confidence 3222 23456666664 24433332221 111 12223 44555666666543 3457999999765
No 34
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=88.40 E-value=9.9 Score=34.60 Aligned_cols=138 Identities=11% Similarity=-0.047 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHH-HHCCCCeEEecCCccCC-CCChHHHHHHHHHHHHHHcCCCCCceeEEeeccc-ChHHHHHHHHhC
Q 020229 182 PKILPIYKEVISEL-KAAGASWIQFDEPLLVM-DLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-NFNDIIHSIIDM 258 (329)
Q Consensus 182 ~~la~~~~~~i~~l-~~aG~~~IQiDEP~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-n~~~i~~~l~~~ 258 (329)
+++++.+..++..- ..-|++.=.| |-.+.+ .+++.+.+.|...++.+.+ . +.++++|+-.| ...+.++.|.+.
T Consensus 129 e~l~~~~~~ei~~Gi~~t~vkaGvI-EiGld~~~~~~~q~~~f~aq~~~A~~-~--glPViiH~r~g~~a~~~l~iL~e~ 204 (330)
T 3pnz_A 129 DKLTEFVVNEVENGLEGTPYKAGQV-KFGTGYNMITPLEEKTIRAVARAHHE-T--KAPIHSHTEAGTMALEQIEILKQE 204 (330)
T ss_dssp HHHHHHHHHHHHTCSTTSSCCEEEE-EEECBTTBCCHHHHHHHHHHHHHHHH-H--CCCEEEECGGGCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhCCCcCcCcCeE-EEEcCCCCCCHHHHHHHHHHHHHHHH-H--CCeEEEeCCCCcChHHHHHHHHHc
Confidence 44555555555432 2234443122 333332 2345555566665555543 2 35789996543 233457777766
Q ss_pred CCc--EEEEEcCC--Cc-hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 259 DAD--VITIENSR--SD-EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 259 ~~d--~~~lE~~~--~~-~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
+++ .+.+-++. .. ....+.+. .|-.+.++-+-+.+ .-+.+.-.+.++++++..+.+|+.+++||.
T Consensus 205 ~~~~~~vvi~H~~~s~~~e~a~~~l~----~G~~i~~~g~~t~~--~~~~~~~~~~l~~lv~~g~~drilleTD~p 274 (330)
T 3pnz_A 205 NIPLEYLSIGHMDRNLDPYYHKQVAK----TGAFMSFDGIAKIK--YAPESARIAAILYLVSEGFEDQILVSGDTA 274 (330)
T ss_dssp TCCGGGEEETTGGGSCCHHHHHHHHT----TTCEEEECCTTCTT--TCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred CCCCCeEEEecCCCCCCHHHHHHHHH----cCcEEEEccCcccC--CCChHHHHHHHHHHHHcCCCCeEEEeCCCC
Confidence 554 55555442 22 33444444 36666665432211 112344667788889999999999999985
No 35
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=88.19 E-value=8.6 Score=34.92 Aligned_cols=130 Identities=14% Similarity=0.205 Sum_probs=71.2
Q ss_pred HHHHHHHHCCCCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEE
Q 020229 190 EVISELKAAGASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~ 264 (329)
+.++.+.+.|+++|-|-- |. . ..+ .++++.+..+++.+.+..+ +.++.+-+.. . .++..-++.+++.+.
T Consensus 69 ~~A~~~v~~GAdIIDIGgeSTrPG-~-~v~~~eEl~Rv~pvI~~l~~~~~-~vpISIDT~~--~-~VaeaAl~aGa~iIN 142 (318)
T 2vp8_A 69 DAVHRAVADGADVIDVGGVKAGPG-E-RVDVDTEITRLVPFIEWLRGAYP-DQLISVDTWR--A-QVAKAACAAGADLIN 142 (318)
T ss_dssp HHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHST-TCEEEEECSC--H-HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCC-C-CCCHHHHHHHHHHHHHHHHhhCC-CCeEEEeCCC--H-HHHHHHHHhCCCEEE
Confidence 346678899999999883 43 2 234 4667788888887776543 3566665552 3 466777777888553
Q ss_pred EEcCC-CchhHHHHhhhcccCCCeeeeeeec---CCCCC--CCC-----------HHHHHHHHHHHHHh-cCCCceEeCC
Q 020229 265 IENSR-SDEKLLSVFREGVKYGAGIGPGVYD---IHSPR--IPS-----------TEEIADRINKMLAV-LETNILWVNP 326 (329)
Q Consensus 265 lE~~~-~~~~~l~~l~~~~~~~~~i~~Gvvd---~~~~~--~e~-----------~e~i~~ri~~a~~~-v~~~~l~isp 326 (329)
+... ...+.++..++ .+..+++=-.. +++.. ..- .+.+.+++++|.+. ++++++++.|
T Consensus 143 -DVsg~~d~~m~~vaa~---~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDP 218 (318)
T 2vp8_A 143 -DTWGGVDPAMPEVAAE---FGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDP 218 (318)
T ss_dssp -ETTSSSSTTHHHHHHH---HTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEET
T ss_pred -ECCCCCchHHHHHHHH---hCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 3322 23466666664 24433332111 11110 000 14445556666543 3457999999
Q ss_pred CCC
Q 020229 327 DLH 329 (329)
Q Consensus 327 dCG 329 (329)
..|
T Consensus 219 G~G 221 (318)
T 2vp8_A 219 AHD 221 (318)
T ss_dssp TTT
T ss_pred CCC
Confidence 866
No 36
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=87.32 E-value=15 Score=32.51 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=64.7
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc-----cCh-------HHHHHHHHhCC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY-----SNF-------NDIIHSIIDMD 259 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~-----Gn~-------~~i~~~l~~~~ 259 (329)
++.+.+.|||+|.+-==.|......+.+......++....++ ++ +-+|+ |.+ -+++....+++
T Consensus 58 ~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~----Pi-I~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g 132 (276)
T 3o1n_A 58 ALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDK----PL-LFTFRSAKEGGEQALTTGQYIDLNRAAVDSG 132 (276)
T ss_dssp HHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSS----CE-EEECCBGGGTCSBCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCC----CE-EEEEEEhhhCCCCCCCHHHHHHHHHHHHhcC
Confidence 344556899988774112221111233433333344433333 44 44554 332 24666667787
Q ss_pred -CcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCC--CceEeCCC
Q 020229 260 -ADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET--NILWVNPD 327 (329)
Q Consensus 260 -~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~--~~l~ispd 327 (329)
+|.+.+|+........+.+......+..++.=.=|- ....+.+++..+++++.+ .|+ =++.+.|.
T Consensus 133 ~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf--~~tP~~~el~~~~~~~~~-~GaDIvKia~~a~ 200 (276)
T 3o1n_A 133 LVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDF--HKTPAAEEIVQRLRKMQE-LGADIPKIAVMPQ 200 (276)
T ss_dssp CCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEES--SCCCCHHHHHHHHHHHHH-TTCSEEEEEECCS
T ss_pred CCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecC--CCCcCHHHHHHHHHHHHH-cCCCEEEEEecCC
Confidence 999999997654322222221001233443323222 123457899999999854 443 35555554
No 37
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=87.11 E-value=3.3 Score=35.87 Aligned_cols=68 Identities=22% Similarity=0.344 Sum_probs=40.9
Q ss_pred HHHHHHHHHHCCCCeEEecC------CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCc
Q 020229 188 YKEVISELKAAGASWIQFDE------PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDE------P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d 261 (329)
+.++++.+ ++|++|+++|- |.++. ....+ +.++... +.++-+|+=--|+...++.+.++++|
T Consensus 15 l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~--G~~~v----~~lr~~~-----~~~~dvhLmv~dp~~~i~~~~~aGAd 82 (231)
T 3ctl_A 15 FKEQIEFI-DSHADYFHIDIMDGHFVPNLTL--SPFFV----SQVKKLA-----TKPLDCHLMVTRPQDYIAQLARAGAD 82 (231)
T ss_dssp HHHHHHHH-HTTCSCEEEEEECSSSSSCCCB--CHHHH----HHHHTTC-----CSCEEEEEESSCGGGTHHHHHHHTCS
T ss_pred HHHHHHHH-HcCCCEEEEEEEeCccCccchh--cHHHH----HHHHhcc-----CCcEEEEEEecCHHHHHHHHHHcCCC
Confidence 44567778 89999999993 22222 12222 2222221 24456666655666667888888888
Q ss_pred EEEEEc
Q 020229 262 VITIEN 267 (329)
Q Consensus 262 ~~~lE~ 267 (329)
.+.+=.
T Consensus 83 ~itvh~ 88 (231)
T 3ctl_A 83 FITLHP 88 (231)
T ss_dssp EEEECG
T ss_pred EEEECc
Confidence 886543
No 38
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=87.09 E-value=7.7 Score=35.85 Aligned_cols=108 Identities=17% Similarity=0.155 Sum_probs=61.7
Q ss_pred CChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH-HHHHHHHhCCCc--EEEEEc---CCCchhHHHHhhhcccCCCe
Q 020229 214 LDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDAD--VITIEN---SRSDEKLLSVFREGVKYGAG 287 (329)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~-~i~~~l~~~~~d--~~~lE~---~~~~~~~l~~l~~~~~~~~~ 287 (329)
+++.+.+.|..+.....+ . +.+|.+|+-.|.-. ..+..|.+.+++ .+.+-. ........+.+. .|..
T Consensus 187 ~t~~E~k~frA~a~aa~e-t--G~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~----~G~y 259 (360)
T 3tn4_A 187 ITEYEKMFFRAAARAQKE-T--GAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLA----YGVY 259 (360)
T ss_dssp CCHHHHHHHHHHHHHHHH-H--CCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT----TTCE
T ss_pred CCHHHHHHHHHHHHHHHH-h--CCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHH----cCCE
Confidence 344443444444333332 2 36889998755321 457777777664 455543 333333344443 3666
Q ss_pred eeeeeecC-CCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 288 IGPGVYDI-HSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 288 i~~Gvvd~-~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
+.+.-+=. ......+-++-++.+++.++..+.+||.+|+||
T Consensus 260 l~fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa 301 (360)
T 3tn4_A 260 IAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDT 301 (360)
T ss_dssp EEECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred EEEcccccccccCCCChHHHHHHHHHHHHhcCcceEEEecCC
Confidence 65532211 111233446677889999999999999999998
No 39
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=86.91 E-value=4.7 Score=34.74 Aligned_cols=72 Identities=15% Similarity=0.150 Sum_probs=43.7
Q ss_pred HHHHHHHHHHCCCCeEEecCCc--cCCCC--ChHHHHHHHHHHHHHH-cCCCCCceeEEeecccChHHHHHHHHhCCCcE
Q 020229 188 YKEVISELKAAGASWIQFDEPL--LVMDL--DSHKLHAFIHSFRITN-CGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 262 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~--l~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~ 262 (329)
+.++++.+.++|++++++|=.- +...+ .+..++ .++... .. .++.+|+=--|+...++.+.++++|.
T Consensus 19 l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~----~ir~~~~~~----~~~dvhLmv~~p~~~i~~~~~aGad~ 90 (228)
T 3ovp_A 19 LGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVE----SLRKQLGQD----PFFDMHMMVSKPEQWVKPMAVAGANQ 90 (228)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHH----HHHHHHCSS----SCEEEEEECSCGGGGHHHHHHHTCSE
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHH----HHHHhhCCC----CcEEEEEEeCCHHHHHHHHHHcCCCE
Confidence 4456777889999999998322 22122 233333 333332 22 33444544456667788889999999
Q ss_pred EEEEc
Q 020229 263 ITIEN 267 (329)
Q Consensus 263 ~~lE~ 267 (329)
+++=.
T Consensus 91 itvH~ 95 (228)
T 3ovp_A 91 YTFHL 95 (228)
T ss_dssp EEEEG
T ss_pred EEEcc
Confidence 98854
No 40
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=85.46 E-value=9.9 Score=31.62 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=40.2
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
.+.++++.++|+++|++++|..+ ........+.+..+.... ++.+.++ +-++...++++|++.+...
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~----~~~~~~~~~~l~~~~~~~--~v~v~v~-------~~~~~a~~~gad~v~l~~~ 95 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAP----TREMYEIGKTLRQLTREY--DALFFVD-------DRVDVALAVDADGVQLGPE 95 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCC----HHHHHHHHHHHHHHHHHT--TCEEEEE-------SCHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHCCCCEEEECCCCCC----HHHHHHHHHHHHHHHHHc--CCeEEEc-------ChHHHHHHcCCCEEEECCc
Confidence 34566788899999999988643 333322233333333322 2444443 1246677889999988754
Q ss_pred C
Q 020229 269 R 269 (329)
Q Consensus 269 ~ 269 (329)
.
T Consensus 96 ~ 96 (215)
T 1xi3_A 96 D 96 (215)
T ss_dssp S
T ss_pred c
Confidence 3
No 41
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=84.91 E-value=20 Score=32.53 Aligned_cols=123 Identities=11% Similarity=0.084 Sum_probs=68.1
Q ss_pred HHHHHHHH-HCCCCeEEec-C---CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH---HHHHHHHhCCC
Q 020229 189 KEVISELK-AAGASWIQFD-E---PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSIIDMDA 260 (329)
Q Consensus 189 ~~~i~~l~-~aG~~~IQiD-E---P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~---~i~~~l~~~~~ 260 (329)
.+..+.+. +.|+++|-|- + |... +.+.++..+ .++.+.+.. +.++.+--| ||.+ .++..-++...
T Consensus 83 ~~~A~~~v~~~GAdiIDIg~eStrP~~~-~vs~ee~~~---~V~~v~~~~--~vPlsIDg~-~~~T~~~eV~eaAleaga 155 (323)
T 4djd_D 83 GRWAQKCVAEYGADLIYLKLDGADPEGA-NHSVDQCVA---TVKEVLQAV--GVPLVVVGC-GDVEKDHEVLEAVAEAAA 155 (323)
T ss_dssp HHHHHHHHHTTCCSEEEEECGGGCTTTT-CCCHHHHHH---HHHHHHHHC--CSCEEEECC-SCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEcCccCCCCCC-CCCHHHHHH---HHHHHHhhC--CceEEEECC-CCCCCCHHHHHHHHHhcC
Confidence 33344555 8999999885 3 3211 234444433 344444434 378899999 9976 45555566554
Q ss_pred c----EEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 261 D----VITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 261 d----~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
+ .-++-..+ ..+......+ .+..+++-- . .+.+..+++++.+.+. ++++++++.|.+|
T Consensus 156 g~~~lINsv~~~~-~~~m~~laa~---~g~~vVlmh--~-----~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g 218 (323)
T 4djd_D 156 GENLLLGNAEQEN-YKSLTAACMV---HKHNIIARS--P-----LDINICKQLNILINEMNLPLDHIVIDPSIG 218 (323)
T ss_dssp TSCCEEEEEBTTB-CHHHHHHHHH---HTCEEEEEC--S-----SCHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred CCCCeEEECCccc-HHHHHHHHHH---hCCeEEEEc--c-----chHHHHHHHHHHHHHcCCCHHHEEEeCCCc
Confidence 3 23333322 2455555554 243333321 1 1345566666555544 4569999999876
No 42
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=84.64 E-value=6 Score=36.65 Aligned_cols=105 Identities=15% Similarity=0.067 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCceeEEeeccc-ChHHHHHHHHhCCC--cEEEEEcCC---CchhHHHHh-hhcccCCCee
Q 020229 216 SHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-NFNDIIHSIIDMDA--DVITIENSR---SDEKLLSVF-REGVKYGAGI 288 (329)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-n~~~i~~~l~~~~~--d~~~lE~~~---~~~~~l~~l-~~~~~~~~~i 288 (329)
+.+.+.|...+..+.+ . +.+|++|+-.| ...++++.|.+.++ ..+.+-+.. ......+.+ . .|-.+
T Consensus 165 ~~Q~~~f~aq~~~A~e-~--glPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~----~G~yI 237 (363)
T 3ovg_A 165 RLELKALEVAARTSIL-T--GCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKE----TGVTL 237 (363)
T ss_dssp HHHHHHHHHHHHHHHH-H--CCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHH----HCCEE
T ss_pred HHHHHHHHHHHHHHHH-h--CCEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHH----CCcEE
Confidence 4445556555554443 2 35789997544 22367777766544 455555543 223445555 3 25566
Q ss_pred eeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 289 GPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 289 ~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
.++-+-+.+ .-+.+.-++.++++++.++.+|+.+++||.
T Consensus 238 ~f~g~~~~~--~~~~~~ra~~l~~lv~~~p~drILleTDap 276 (363)
T 3ovg_A 238 CFDGPDRVK--YYPDSLLAENIKYLVDKGLQKHITLSLDAG 276 (363)
T ss_dssp EECCTTCTT--TCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred EECCeeccc--cCChhHHHHHHHHHHHhcCCCeEEEeCCCC
Confidence 655332111 112345677899999999999999999984
No 43
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=84.52 E-value=21 Score=31.52 Aligned_cols=126 Identities=11% Similarity=0.081 Sum_probs=69.8
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhC--CCcEEEEEc
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDM--DADVITIEN 267 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~--~~d~~~lE~ 267 (329)
+.++.+.+.|+++|-|---+ ...++.+.+.++++.+.+.. +.++.+-++. . .++..-++. +++.+. +.
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s----~~~eE~~rv~~vi~~l~~~~--~~pisIDT~~--~-~v~~aal~a~~Ga~iIN-dv 107 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGP----TADDPVRVMEWLVKTIQEVV--DLPCCLDSTN--P-DAIEAGLKVHRGHAMIN-ST 107 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCS----CSSCHHHHHHHHHHHHHHHC--CCCEEEECSC--H-HHHHHHHHHCCSCCEEE-EE
T ss_pred HHHHHHHHCCCCEEEEcCCc----CchhHHHHHHHHHHHHHHhC--CCeEEEeCCC--H-HHHHHHHHhCCCCCEEE-EC
Confidence 34566778999999987433 12346666777777766544 3677777772 3 456666666 777654 22
Q ss_pred CCC-c--hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHH----HHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 268 SRS-D--EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTE----EIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 268 ~~~-~--~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e----~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
... . .+.+...++ .+..+++=-.|.+ ..-.+.+ ...++++.+.+. ++++++++.|.+|
T Consensus 108 s~~~d~~~~~~~~~a~---~~~~vv~m~~d~~-G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~g 173 (271)
T 2yci_X 108 SADQWKMDIFFPMAKK---YEAAIIGLTMNEK-GVPKDANDRSQLAMELVANADAHGIPMTELYIDPLIL 173 (271)
T ss_dssp CSCHHHHHHHHHHHHH---HTCEEEEESCBTT-BCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCC
T ss_pred CCCccccHHHHHHHHH---cCCCEEEEecCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCC
Confidence 211 2 345555553 2443333323211 1123333 444455555432 3467899999876
No 44
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=83.62 E-value=6.5 Score=33.55 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=44.4
Q ss_pred HHHHHHHHCCCCeEEecCCccCC--C--CChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEE-
Q 020229 190 EVISELKAAGASWIQFDEPLLVM--D--LDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT- 264 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~- 264 (329)
+.++.+.++|+++||+|.--... . ...+.+ ..+.+.. +.++.+|+=--|....++.+.++++|++.
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~-------~~lr~~~--~~~~~v~lmv~d~~~~i~~~~~agad~v~v 93 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVI-------QSLRKHT--KAYLDCHLMVTNPSDYVEPLAKAGASGFTF 93 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHH-------HHHHTTC--CSEEEEEEESSCGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHH-------HHHHhhc--CCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 44666788999999999532111 1 112222 2222222 23556666544555567888888999984
Q ss_pred -EEcCCCc-hhHHHHhh
Q 020229 265 -IENSRSD-EKLLSVFR 279 (329)
Q Consensus 265 -lE~~~~~-~~~l~~l~ 279 (329)
.|..... .+..+.+.
T Consensus 94 H~~~~~~~~~~~~~~i~ 110 (228)
T 1h1y_A 94 HIEVSRDNWQELIQSIK 110 (228)
T ss_dssp EGGGCTTTHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHH
Confidence 4433333 33444444
No 45
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=81.10 E-value=7.6 Score=33.00 Aligned_cols=70 Identities=14% Similarity=0.292 Sum_probs=42.1
Q ss_pred HHHHHHHHCCCCeEEecC---CccCC-CCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDE---PLLVM-DLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE---P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
+.++++.++|+++||++. |.... ....+.+ ..+.+.. +.++.+|+..-+....++.+.++++|++.+
T Consensus 27 ~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i-------~~l~~~~--~~~~~v~l~vnd~~~~v~~~~~~Gad~v~v 97 (230)
T 1rpx_A 27 EQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVV-------DSLRPIT--DLPLDVHLMIVEPDQRVPDFIKAGADIVSV 97 (230)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHH-------HHHGGGC--CSCEEEEEESSSHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHCCCCEEEEeeccCCcccccccCHHHH-------HHHHhcc--CCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 345667889999999974 33111 1112222 2233222 245678887655555677788899999876
Q ss_pred EcC
Q 020229 266 ENS 268 (329)
Q Consensus 266 E~~ 268 (329)
-..
T Consensus 98 h~~ 100 (230)
T 1rpx_A 98 HCE 100 (230)
T ss_dssp ECS
T ss_pred Eec
Confidence 654
No 46
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=80.94 E-value=4.6 Score=34.69 Aligned_cols=68 Identities=4% Similarity=0.103 Sum_probs=40.1
Q ss_pred HHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 193 SELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 193 ~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
+.+.++|+++|++++......-... + +.+..+.+.. +.++.+|--.-+... ++.++++++|.+.+-..
T Consensus 39 ~~~~~~Gad~i~v~~~d~~~~~~~~----~-~~i~~i~~~~--~ipv~v~ggI~~~~~-~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 39 LAWQRSGAEWLHLVDLDAAFGTGDN----R-ALIAEVAQAM--DIKVELSGGIRDDDT-LAAALATGCTRVNLGTA 106 (244)
T ss_dssp HHHHHTTCSEEEEEEHHHHHTSCCC----H-HHHHHHHHHC--SSEEEEESSCCSHHH-HHHHHHTTCSEEEECHH
T ss_pred HHHHHcCCCEEEEecCchhhcCCCh----H-HHHHHHHHhc--CCcEEEECCcCCHHH-HHHHHHcCCCEEEECch
Confidence 5567799999999864322110011 1 2223333333 256777755444544 77788899999998764
No 47
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=80.63 E-value=14 Score=30.86 Aligned_cols=69 Identities=10% Similarity=0.159 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCeEEecCCccC--CCCC--hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLV--MDLD--SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~ 264 (329)
.+.++.+.++|++++|++.--.+ ..++ .+.+ +.+.+.. +.++.+|+-.-|..+.++.+.++++|++.
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i-------~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v~ 89 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVV-------ASMRKHS--KLVFDCHLMVVDPERYVEAFAQAGADIMT 89 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHH-------HHHHTTC--CSEEEEEEESSSGGGGHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHH-------HHHHHhC--CCCEEEEEeecCHHHHHHHHHHcCCCEEE
Confidence 34456677899999999952211 1112 2222 2222222 24667777655554445788888899887
Q ss_pred EE
Q 020229 265 IE 266 (329)
Q Consensus 265 lE 266 (329)
+-
T Consensus 90 vh 91 (220)
T 2fli_A 90 IH 91 (220)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 48
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=79.71 E-value=48 Score=32.44 Aligned_cols=136 Identities=15% Similarity=0.164 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeeccc---------ChHHH
Q 020229 181 LPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYS---------NFNDI 251 (329)
Q Consensus 181 ~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G---------n~~~i 251 (329)
++.+.+.|++.++.|.+.|+|++-+. ++ .+..+.++...+.+....+ .++++..++. .....
T Consensus 121 ~~e~~~~~~~qi~~l~~~gvD~l~~E--T~---~~~~Ea~aa~~a~~~~~~~----~Pv~vS~t~~~~g~~~~G~~~~~~ 191 (566)
T 1q7z_A 121 FEEFYENFRETVEIMVEEGVDGIIFE--TF---SDILELKAAVLAAREVSRD----VFLIAHMTFDEKGRSLTGTDPANF 191 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEE--EE---CCHHHHHHHHHHHHHHCSS----SCEEEEECCCTTSCCTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEe--cc---CCHHHHHHHHHHHHHhCCC----CcEEEEEEEcCCCeeCCCCcHHHH
Confidence 36778899999999999999998776 21 2234455555555544333 4566666542 23467
Q ss_pred HHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecC---------CCCCCCCHHHHHHHHHHHHHhcCCCce
Q 020229 252 IHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI---------HSPRIPSTEEIADRINKMLAVLETNIL 322 (329)
Q Consensus 252 ~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~---------~~~~~e~~e~i~~ri~~a~~~v~~~~l 322 (329)
+..+...+++++.+=.+..+......++. +......-+++.+. ...+-++|++.++.+++..+. |. -
T Consensus 192 ~~~l~~~~~~avG~NC~~gp~~~~~~l~~-l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~-G~--~ 267 (566)
T 1q7z_A 192 AITFDELDIDALGINCSLGPEEILPIFQE-LSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYEL-GV--N 267 (566)
T ss_dssp HHHHHTSSCSEEEEESSSCHHHHHHHHHH-HHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHT-TC--S
T ss_pred HHHhhccCCCEEEEeCCCCHHHHHHHHHH-HHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHc-CC--c
Confidence 88888899999999987655544444442 00111233344332 222357899888888776543 32 2
Q ss_pred EeCCCCC
Q 020229 323 WVNPDLH 329 (329)
Q Consensus 323 ~ispdCG 329 (329)
+|.-.||
T Consensus 268 iiGGCCG 274 (566)
T 1q7z_A 268 IFGGCCG 274 (566)
T ss_dssp EECCCTT
T ss_pred EEccccC
Confidence 4555665
No 49
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=79.70 E-value=26 Score=33.24 Aligned_cols=130 Identities=10% Similarity=0.107 Sum_probs=74.0
Q ss_pred HHHHHHHHCCCCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHc---CCCCCceeEEeecccChHHHHHHHHh--CC
Q 020229 190 EVISELKAAGASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNC---GVQDTTQIHTHMCYSNFNDIIHSIID--MD 259 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~lH~C~Gn~~~i~~~l~~--~~ 259 (329)
+.++++.+.|+++|-|-- |... .++ .++++++.++++.+.+ ..+.+.++.+-+.. . .++..-++ .+
T Consensus 216 ~~A~~mv~~GAdIIDIGgeSTrPGa~-~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~--~-~VaeaAL~~~aG 291 (442)
T 3mcm_A 216 LNLDELIQSGAEIIDIGAESTKPDAK-PISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRK--L-EVMQKILAKHHD 291 (442)
T ss_dssp HHHHHHHHHTCSEEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCC--H-HHHHHHHHHHGG
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCC--H-HHHHHHHhhCCC
Confidence 345678889999998873 2221 233 3567777788777765 22113566666662 3 45666666 67
Q ss_pred CcE-EEEEcC-CCchhHHHHhhhcccCCCeeeeeeecCC-CC-----------CCCCHHHHHHHHHHHHHh-cCCCceEe
Q 020229 260 ADV-ITIENS-RSDEKLLSVFREGVKYGAGIGPGVYDIH-SP-----------RIPSTEEIADRINKMLAV-LETNILWV 324 (329)
Q Consensus 260 ~d~-~~lE~~-~~~~~~l~~l~~~~~~~~~i~~Gvvd~~-~~-----------~~e~~e~i~~ri~~a~~~-v~~~~l~i 324 (329)
++. +. +.. ....+.++.+++ .+..+++ ...+ .+ ..|-.+.+.+++++|.+. |+++++++
T Consensus 292 a~i~IN-DVsg~~d~~m~~v~a~---~g~~vVl--Mh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Iil 365 (442)
T 3mcm_A 292 IIWMIN-DVECNNIEQKAQLIAK---YNKKYVI--IHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYF 365 (442)
T ss_dssp GCCEEE-ECCCTTHHHHHHHHHH---HTCEEEE--ECC----------------CTHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCEEEE-cCCCCCChHHHHHHHH---hCCeEEE--ECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEE
Confidence 776 32 222 223456666664 2444443 2221 11 112345667777777665 56699999
Q ss_pred CCCCC
Q 020229 325 NPDLH 329 (329)
Q Consensus 325 spdCG 329 (329)
.|.-|
T Consensus 366 DPGiG 370 (442)
T 3mcm_A 366 DIGFG 370 (442)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 99755
No 50
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=78.48 E-value=14 Score=33.98 Aligned_cols=122 Identities=14% Similarity=0.166 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE 266 (329)
+..+++++|.++||++|-+-=|. .+. .+++..+.+..+ .+++.-+=| |+. ++-.-.+.++|.+.+.
T Consensus 47 atv~Qi~~l~~aG~diVRvavp~------~~~----a~al~~I~~~~~--vPlvaDiHf-~~~-lal~a~e~G~dklRIN 112 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVPH------KED----VEALEEIVKKSP--MPVIADIHF-APS-YAFLSMEKGVHGIRIN 112 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS------HHH----HHHHHHHHHHCS--SCEEEECCS-CHH-HHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEeCCCC------hHH----HHHHHHHHhcCC--CCEEEeCCC-CHH-HHHHHHHhCCCeEEEC
Confidence 45566889999999999996554 222 234444444443 566555432 343 3444567789998887
Q ss_pred cCCC--ch---hHHHHhhhcccCCCeeeeeeecCCCCC--------CCCHHHHHHHHHHH---HHhcCCCceEeCC
Q 020229 267 NSRS--DE---KLLSVFREGVKYGAGIGPGVYDIHSPR--------IPSTEEIADRINKM---LAVLETNILWVNP 326 (329)
Q Consensus 267 ~~~~--~~---~~l~~l~~~~~~~~~i~~Gvvd~~~~~--------~e~~e~i~~ri~~a---~~~v~~~~l~isp 326 (329)
=.+- .. +..+..+ ..+..+.+|| +..|.. -.+||.+.+-..+- ++.++.+++.+|.
T Consensus 113 PGNig~~~~~~~vv~~ak---~~~~piRIGv-N~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~ 184 (366)
T 3noy_A 113 PGNIGKEEIVREIVEEAK---RRGVAVRIGV-NSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSI 184 (366)
T ss_dssp HHHHSCHHHHHHHHHHHH---HHTCEEEEEE-EGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CcccCchhHHHHHHHHHH---HcCCCEEEec-CCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 5432 22 2233333 2478888887 444432 25777665554433 3445778888874
No 51
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=77.38 E-value=13 Score=30.94 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=43.9
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCC
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
+.++++.+.|+++||++++... .++.+ ..+.+..+....++.=.+.-+ .-++...++++|++++..
T Consensus 23 ~~~~~~~~~G~~~i~l~~~~~~------~~~~i----~~i~~~~~~~l~vg~g~~~~~--~~i~~a~~~Gad~V~~~~-- 88 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPLNSPQ------WEQSI----PAIVDAYGDKALIGAGTVLKP--EQVDALARMGCQLIVTPN-- 88 (212)
T ss_dssp HHHHHHHHHTCCEEEEETTSTT------HHHHH----HHHHHHHTTTSEEEEECCCSH--HHHHHHHHTTCCEEECSS--
T ss_pred HHHHHHHHCCCCEEEEeCCChh------HHHHH----HHHHHhCCCCeEEEeccccCH--HHHHHHHHcCCCEEEeCC--
Confidence 3456677889999999987521 12211 222221221133322222112 347888899999998543
Q ss_pred CchhHHHHhhhcccCCCeeeee
Q 020229 270 SDEKLLSVFREGVKYGAGIGPG 291 (329)
Q Consensus 270 ~~~~~l~~l~~~~~~~~~i~~G 291 (329)
...+..+..+. .+..+.+|
T Consensus 89 ~~~~~~~~~~~---~g~~~~~g 107 (212)
T 2v82_A 89 IHSEVIRRAVG---YGMTVCPG 107 (212)
T ss_dssp CCHHHHHHHHH---TTCEEECE
T ss_pred CCHHHHHHHHH---cCCCEEee
Confidence 22333334332 24556666
No 52
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=77.24 E-value=19 Score=32.49 Aligned_cols=85 Identities=15% Similarity=0.217 Sum_probs=51.3
Q ss_pred HHHHHHHHCCCCeEEecCCccCCC---CC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMD---LD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
+.++.+.+.|+++|-|---+-... ++ .++++.+.++++.+.+.. +.++.+-+. -..++..-++.+++.+.
T Consensus 37 ~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~--~vpiSIDT~---~~~Va~aAl~aGa~iIN- 110 (314)
T 2vef_A 37 QQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES--DVLISIDTW---KSQVAEAALAAGADLVN- 110 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC--CCEEEEECS---CHHHHHHHHHTTCCEEE-
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC--CceEEEeCC---CHHHHHHHHHcCCCEEE-
Confidence 346778899999998874221111 11 356677888877776543 356666555 23567777788887664
Q ss_pred EcCC--CchhHHHHhhh
Q 020229 266 ENSR--SDEKLLSVFRE 280 (329)
Q Consensus 266 E~~~--~~~~~l~~l~~ 280 (329)
+... ...+.++..++
T Consensus 111 DVsg~~~d~~m~~v~a~ 127 (314)
T 2vef_A 111 DITGLMGDEKMPHVVAE 127 (314)
T ss_dssp ETTTTCSCTTHHHHHHH
T ss_pred ECCCCCCChHHHHHHHH
Confidence 3222 12456666664
No 53
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=74.29 E-value=15 Score=32.45 Aligned_cols=77 Identities=12% Similarity=0.095 Sum_probs=44.9
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHHH--------------HHHHHHHHHHcCCCCCceeEEeecccC-----h
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKLH--------------AFIHSFRITNCGVQDTTQIHTHMCYSN-----F 248 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~lH~C~Gn-----~ 248 (329)
..+.+++|.++|+++|.|+=|.--.-.+...++ .+.+.+..+.+... +.++++-+++.. .
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-~~Pivlm~Y~npv~~~g~ 112 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP-DMPIGLLLYANLVFANGI 112 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TCCEEEEECHHHHHHHCH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHhhH
Confidence 345567899999999999977611112222222 12334444443311 367777666321 2
Q ss_pred HHHHHHHHhCCCcEEEE
Q 020229 249 NDIIHSIIDMDADVITI 265 (329)
Q Consensus 249 ~~i~~~l~~~~~d~~~l 265 (329)
+..+..+.++++|++-+
T Consensus 113 e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 45677778889999766
No 54
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=73.83 E-value=23 Score=30.23 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=43.6
Q ss_pred HHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 193 SELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 193 ~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
+.+.++|+++|++.++..... ......+.+..+.+.. +.++.+|-..-+.++ +..+++.++|++.+-..
T Consensus 37 ~~~~~~Gad~i~v~d~~~~~~----~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~-~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 37 KFYSEIGIDELVFLDITASVE----KRKTMLELVEKVAEQI--DIPFTVGGGIHDFET-ASELILRGADKVSINTA 105 (253)
T ss_dssp HHHHHTTCCEEEEEESSCSSS----HHHHHHHHHHHHHTTC--CSCEEEESSCCSHHH-HHHHHHTTCSEEEESHH
T ss_pred HHHHHcCCCEEEEECCchhhc----CCcccHHHHHHHHHhC--CCCEEEeCCCCCHHH-HHHHHHcCCCEEEEChH
Confidence 556789999999998764321 1112234445555544 367777766544544 66677889999988654
No 55
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=73.79 E-value=36 Score=31.81 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCC--eEEec-CCccCCC--CChHHH-HHHHHHHHHHHcCCCCCceeEEeecccC--
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGAS--WIQFD-EPLLVMD--LDSHKL-HAFIHSFRITNCGVQDTTQIHTHMCYSN-- 247 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~--~IQiD-EP~l~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~i~lH~C~Gn-- 247 (329)
+..++...+.+-.+..++.|.+.|+. +||+= |+..... ..-+.+ +.+..+++.+.+.-+ +.+|.+|+|.|.
T Consensus 131 ~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p-~~~V~ih~~~~~~~ 209 (399)
T 1ur4_A 131 NFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDS-NILVALHFTNPETS 209 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCT-TSEEEEEECCTTST
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCCCcch
Confidence 56778888887778888889888864 77665 7765331 112233 233444444444334 578899999763
Q ss_pred --hHHHHHHHHh--CCCcEEEEEcCC
Q 020229 248 --FNDIIHSIID--MDADVITIENSR 269 (329)
Q Consensus 248 --~~~i~~~l~~--~~~d~~~lE~~~ 269 (329)
+.-.++.|.. .++|+|++-+..
T Consensus 210 ~~~~~~~d~l~~~g~d~DvIG~syYp 235 (399)
T 1ur4_A 210 GRYAWIAETLHRHHVDYDVFASSYYP 235 (399)
T ss_dssp THHHHHHHHHHHTTCCCSEEEEEECT
T ss_pred HHHHHHHHHHHHcCCCcCeEeEecCc
Confidence 2234566654 468999998764
No 56
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=73.51 E-value=5.1 Score=36.44 Aligned_cols=83 Identities=18% Similarity=0.253 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCC-CChHHHHHHHHHHHHHHcCCCCCceeEEeec-----------ccC
Q 020229 180 LLPKILPIYKEVISELKAAGASWIQFDEPLLVMD-LDSHKLHAFIHSFRITNCGVQDTTQIHTHMC-----------YSN 247 (329)
Q Consensus 180 l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C-----------~Gn 247 (329)
-++++..+|.+++....++|.++|-+---.|+.- -++++ +.++|.+++++.. .+|+||-- ||+
T Consensus 131 ~l~~V~~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~~pdD---Y~~VY~~vL~q~~--~PVILHWLG~mFDPaL~GYWGs 205 (396)
T 4dnh_A 131 SIDDILAAYESQIEAIEAEGGRIILMASRALAAAAKGPED---YIRVYDRVLSQVK--EPVIIHWLGEMFDPALEGYWGN 205 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCCHHHHHHCCSHHH---HHHHHHHHHHHCS--SCEEEEEECTTTCGGGTTTTSC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEehhHHHHHHhCCHHH---HHHHHHHHHHhcC--CCEEEEecccccChhhccccCC
Confidence 4688999999999999999999998775444431 23444 4778888888885 58899965 443
Q ss_pred h--H----HHHHHHHh--CCCcEEEEEc
Q 020229 248 F--N----DIIHSIID--MDADVITIEN 267 (329)
Q Consensus 248 ~--~----~i~~~l~~--~~~d~~~lE~ 267 (329)
. . -.++.|.+ .+||+|-+-.
T Consensus 206 ~d~~~A~~t~l~lI~~~~~kVDGIKiSL 233 (396)
T 4dnh_A 206 ADHMAAMKTCLDVLEAHAAKVDGIKISL 233 (396)
T ss_dssp SSHHHHHHHHHHHHHHTGGGEEEEEEES
T ss_pred CCHHHHHHHHHHHHHhChhhcCceEEee
Confidence 2 1 34555543 3788887764
No 57
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=73.39 E-value=15 Score=30.80 Aligned_cols=69 Identities=16% Similarity=0.093 Sum_probs=38.0
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
+.++++.++|+++||++++..... .-..+....+.+..+.... ++.+.++- -++...++++|++++...
T Consensus 35 ~~~~~~~~~G~~~i~l~~~~~~~~-~~~~~~~~~~~l~~~~~~~--~v~v~v~~-------~~~~a~~~gad~v~l~~~ 103 (227)
T 2tps_A 35 TVVQKALKGGATLYQFREKGGDAL-TGEARIKFAEKAQAACREA--GVPFIVND-------DVELALNLKADGIHIGQE 103 (227)
T ss_dssp HHHHHHHHHTCSEEEECCCSTTCC-CHHHHHHHHHHHHHHHHHH--TCCEEEES-------CHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHCCCCEEEEecCCCCHh-HHHHHHHHHHHHHHHHHHc--CCeEEEcC-------HHHHHHHcCCCEEEECCC
Confidence 445667789999999998764321 1100122233333333322 13444431 256677889999988543
No 58
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=73.24 E-value=32 Score=28.75 Aligned_cols=64 Identities=6% Similarity=0.086 Sum_probs=37.6
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
++++.++|+++||++++. ++..++..+.+.+... ..+.. .+.++ + -++...+.++|++++-...
T Consensus 35 ~~~~~~~G~~~v~lr~~~----~~~~~~~~~~~~l~~~--~~~~~-~l~v~----~---~~~~a~~~gad~v~l~~~~ 98 (221)
T 1yad_A 35 IIITIQNEVDFIHIRERS----KSAADILKLLDLIFEG--GIDKR-KLVMN----G---RVDIALFSTIHRVQLPSGS 98 (221)
T ss_dssp HHHHHGGGCSEEEECCTT----SCHHHHHHHHHHHHHT--TCCGG-GEEEE----S---CHHHHHTTTCCEEEECTTS
T ss_pred HHHHHHCCCCEEEEccCC----CCHHHHHHHHHHHHHh--cCcCC-eEEEe----C---hHHHHHHcCCCEEEeCCCc
Confidence 455668899999999775 3344443333333322 12211 34444 1 2577788899999987543
No 59
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=73.24 E-value=19 Score=31.40 Aligned_cols=20 Identities=5% Similarity=0.099 Sum_probs=12.5
Q ss_pred HHHHHHHhcCCCceEeCCCC
Q 020229 309 RINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 309 ri~~a~~~v~~~~l~ispdC 328 (329)
+++++++.+|.+++.+-+||
T Consensus 178 ~~~~~v~~ip~drlLlETD~ 197 (254)
T 3gg7_A 178 KGAALIRSMPRDRVLTETDG 197 (254)
T ss_dssp HHHHHHHHSCGGGEEECCCT
T ss_pred HHHHHHHHcCCCeEEEeCCC
Confidence 44556666666666666665
No 60
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=72.14 E-value=30 Score=31.71 Aligned_cols=91 Identities=7% Similarity=0.144 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCc-------cCC--CC-------ChHH-HHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDEPL-------LVM--DL-------DSHK-LHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~-------l~~--~~-------~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.|.+..+...++|++.|+|.--- |+. +. +-+. .+...+.++.+.+.++.+.+
T Consensus 149 t~~e-I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~p 227 (363)
T 3l5l_A 149 TLDD-IARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLP 227 (363)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCce
Confidence 4444 46788888888888899999999999421 111 10 1121 23456777888877766666
Q ss_pred eEEeecc------c-----ChHHHHHHHHhCCCcEEEEEc
Q 020229 239 IHTHMCY------S-----NFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 239 i~lH~C~------G-----n~~~i~~~l~~~~~d~~~lE~ 267 (329)
|++-+.. | ++..++..|.+.++|.|++-.
T Consensus 228 V~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 228 LTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 7776652 2 122567788889999999864
No 61
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=72.08 E-value=9 Score=34.45 Aligned_cols=61 Identities=15% Similarity=0.169 Sum_probs=39.9
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH-HHHHHHHhCCCcEEEEEc
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIEN 267 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~-~i~~~l~~~~~d~~~lE~ 267 (329)
++++..++|+++|++|. ++++++++.+.. +.. .+.+-.. |+.+ +-+..+.+++||+||+=.
T Consensus 219 e~~eAl~aGaDiImLDn------~s~~~l~~av~~---~~~------~v~leaS-GGIt~~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDN------MSISEIKKAVDI---VNG------KSVLEVS-GCVNIRNVRNIALTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHTTCSEEEEES------CCHHHHHHHHHH---HTT------SSEEEEE-SSCCTTTHHHHHTTTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHHHh---hcC------ceEEEEE-CCCCHHHHHHHHHcCCCEEEeCc
Confidence 55666679999999995 345555433332 221 2344455 7654 467888999999999864
No 62
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=71.45 E-value=58 Score=29.27 Aligned_cols=126 Identities=8% Similarity=0.020 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHCCCCeEEecC----CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH---HHHHHHHhCC
Q 020229 187 IYKEVISELKAAGASWIQFDE----PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSIIDMD 259 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDE----P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~---~i~~~l~~~~ 259 (329)
...+..+.+.+.|+++|-|-- |. +...+.++..+ +++.+.+.. +.++.+- +.||.+ .++..-++..
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~StrP~-~~~vs~eee~~---vV~~v~~~~--~vplsI~-DT~~~~~~~~V~eaal~ag 147 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVSAHPD-GQNRSGAELAE---VCKAVADAI--DVPLMII-GCGVEEKDAEIFPVIGEAL 147 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGGGCTT-TTCCCHHHHHH---HHHHHHHHC--SSCEEEE-CCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcEEEEeCccCCCC-CCCCCHHHHHH---HHHHHHHhC--CceEEEE-CCCCCCCCHHHHHHHHHhC
Confidence 444556667799999998874 33 11234444322 333333323 2555442 336654 4666667777
Q ss_pred Cc--EEEEEcCC-CchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 260 AD--VITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 260 ~d--~~~lE~~~-~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
++ .+--+... ...+......+ .+..+++-- .. +.+.+.++++.+.+. ++++++++.|.+|
T Consensus 148 a~~k~iINdvs~~~~~~~~~~aa~---~g~~vv~m~--~~-----dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 148 SGRNCLLSSATKDNYKPIVATCMV---HGHSVVASA--PL-----DINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp TTSCCEEEEECTTTHHHHHHHHHH---HTCEEEEEC--SS-----CHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred CCCCCEEEECCCCccHHHHHHHHH---hCCCEEEEC--hh-----HHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 76 23233222 23455555553 244444322 11 357777788777754 4569999999876
No 63
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=70.28 E-value=38 Score=29.01 Aligned_cols=85 Identities=9% Similarity=0.116 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeeccc-------ChHHHH
Q 020229 181 LPKILPIYKEVISELKAAGASWIQFDEPLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-------NFNDII 252 (329)
Q Consensus 181 ~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-------n~~~i~ 252 (329)
.+...+.+++.++...+.|+++|.+.-... ...+ .+.++.+.+.++++.+.. .++.+.+|...+ +...+.
T Consensus 84 r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~-~~~~~~~~~~~~~~~l~~l~~~~-~gv~l~lEn~~~~~~~~~~~~~~~~ 161 (287)
T 2x7v_A 84 WQKSVELLKKEVEICRKLGIRYLNIHPGSH-LGTGEEEGIDRIVRGLNEVLNNT-EGVVILLENVSQKGGNIGYKLEQLK 161 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCEEC-TTSCHHHHHHHHHHHHHHHHTTC-CSCEEEEECCCCCTTEECSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCCC-CCCCHHHHHHHHHHHHHHHHccc-CCCEEEEeCCCCCCCccCCCHHHHH
Confidence 345556777778888889999988742221 1222 344577788888887644 368899988744 334556
Q ss_pred HHHHhCCC-cE--EEEEc
Q 020229 253 HSIIDMDA-DV--ITIEN 267 (329)
Q Consensus 253 ~~l~~~~~-d~--~~lE~ 267 (329)
..+.+++- +. +.+|.
T Consensus 162 ~l~~~~~~~~~vg~~~D~ 179 (287)
T 2x7v_A 162 KIRDLVDQRDRVAITYDT 179 (287)
T ss_dssp HHHHHCSCGGGEEEEEEH
T ss_pred HHHHhcCCCCCeEEEEEh
Confidence 66666654 44 45554
No 64
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=69.59 E-value=36 Score=29.32 Aligned_cols=131 Identities=8% Similarity=-0.032 Sum_probs=66.4
Q ss_pred HHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 190 EVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++++.+.+.|++-|.+---.-. ..+....+ .+.+..+.+ . +.++.+|+-......+...+.+.+ -.+-+...
T Consensus 96 ~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~---~~~~~~a~~-~--~lpv~iH~~~~~~~~~~~~~~~~p-l~~vi~H~ 168 (288)
T 2ffi_A 96 ATLAEMARLGVRGVRLNLMGQDMPDLTGAQW---RPLLERIGE-Q--GWHVELHRQVADIPVLVRALQPYG-LDIVIDHF 168 (288)
T ss_dssp HHHHHHHTTTCCEEECCCSSSCCCCTTSTTT---HHHHHHHHH-H--TCEEEECSCTTTHHHHHHHHTTTT-CCEEESGG
T ss_pred HHHHHHHHCCCeEEEEecccCCCCCcccHHH---HHHHHHHHH-C--CCeEEEeechhhHHHHHHHHHHCC-CCEEEECC
Confidence 4566677789887765321110 11222222 333333332 1 357788876444566777777777 34666554
Q ss_pred CCch-------hHHHHhhhcccCCCeeeeee--ecCCCCC-CCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 269 RSDE-------KLLSVFREGVKYGAGIGPGV--YDIHSPR-IPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 269 ~~~~-------~~l~~l~~~~~~~~~i~~Gv--vd~~~~~-~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
..+. .-++.+.+... ...+.+++ +-+.+.. -.+.+.....++++++.+|.+|++..+|+
T Consensus 169 g~~~~~~~~~~~~~~~~~~l~~-~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~ 237 (288)
T 2ffi_A 169 GRPDARRGLGQPGFAELLTLSG-RGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDW 237 (288)
T ss_dssp GSCCTTSCTTCTTHHHHTTCCC-CSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCT
T ss_pred CCCCCCCCCCChhHHHHHHHHh-CCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCC
Confidence 3211 01222322111 12333333 1111111 11224556778999999999999999886
No 65
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=69.31 E-value=44 Score=30.42 Aligned_cols=91 Identities=10% Similarity=0.083 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCc--c-----CC--CC-------ChHH-HHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDEPL--L-----VM--DL-------DSHK-LHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~--l-----~~--~~-------~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.|.+..+...++|++.|+|.--- | +. +. +.+. .+...+.+..+.+.++.+.+
T Consensus 143 t~~e-I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~p 221 (349)
T 3hgj_A 143 DEAG-MERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELP 221 (349)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCce
Confidence 4444 47788888888888999999999998521 1 11 00 1111 23345666666666655566
Q ss_pred eEEeecc------cC----hHHHHHHHHhCCCcEEEEEc
Q 020229 239 IHTHMCY------SN----FNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 239 i~lH~C~------Gn----~~~i~~~l~~~~~d~~~lE~ 267 (329)
|++-+.. |. +..++..|.+.++|.|++-.
T Consensus 222 V~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 222 LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp EEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 7775552 21 23567788889999999863
No 66
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=68.14 E-value=29 Score=29.95 Aligned_cols=76 Identities=13% Similarity=0.148 Sum_probs=41.4
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHH--------------HHHHHHHHHHHcCCCCCceeEEeecccChH--HH
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKL--------------HAFIHSFRITNCGVQDTTQIHTHMCYSNFN--DI 251 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~--~i 251 (329)
..+.++++.++|+++|+++-|.-....+...+ +...+.++.+.+.. +.++++-.++ |.. .-
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~--~~Pv~~m~~~-~~~~~~~ 110 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL--SCPVVLLSYY-KPIMFRS 110 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC--SSCEEEECCS-HHHHSCC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCCEEEEecC-cHHHHHH
Confidence 44557788899999999998873211222111 11233344444432 3555443332 211 01
Q ss_pred HHHHHhCCCcEEEEE
Q 020229 252 IHSIIDMDADVITIE 266 (329)
Q Consensus 252 ~~~l~~~~~d~~~lE 266 (329)
++.+.++++|++.+-
T Consensus 111 ~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 111 LAKMKEAGVHGLIVP 125 (262)
T ss_dssp THHHHHTTCCEEECT
T ss_pred HHHHHHcCCCEEEEc
Confidence 234788999988873
No 67
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=67.50 E-value=18 Score=30.58 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=41.2
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEc
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~ 267 (329)
+.++.+.++|+++|++.++..... ... ...+.+..+.+.. +.++.+|....+... +..+.++++|++.+-.
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~~~~~-~~~---~~~~~i~~i~~~~--~ipvi~~g~i~~~~~-~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDITAAPE-GRA---TFIDSVKRVAEAV--SIPVLVGGGVRSLED-ATTLFRAGADKVSVNT 107 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECCCCTT-THH---HHHHHHHHHHHHC--SSCEEEESSCCSHHH-HHHHHHHTCSEEEESH
T ss_pred HHHHHHHHcCCCEEEEEeCCcccc-CCc---ccHHHHHHHHHhc--CCCEEEECCCCCHHH-HHHHHHcCCCEEEECh
Confidence 345667789999999997654321 111 1122333344333 256666655445544 3667778899888764
No 68
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=67.00 E-value=32 Score=30.13 Aligned_cols=131 Identities=12% Similarity=0.014 Sum_probs=67.7
Q ss_pred HHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 190 EVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++++++.+.|+.-|-++-..-. .++.. ..+.+.+..+.+ . +.++.+|+-......+.+.+.+.++ .+-++..
T Consensus 109 ~eL~~l~~~gv~Gi~l~~~~~~~~~~~~---~~~~~~~~~a~~-~--glpv~iH~~~~~l~~~~~~l~~~p~-~~Vi~H~ 181 (294)
T 4i6k_A 109 NELVNLKAQGIVGVRLNLFGLNLPALNT---PDWQKFLRNVES-L--NWQVELHAPPKYLVQLLPQLNEYSF-DVVIDHF 181 (294)
T ss_dssp HHHHHHHTTTEEEEEEECTTSCCCCSSS---HHHHHHHHHHHH-T--TCEEEEECCHHHHHHHHHHHTTSSS-CEEESGG
T ss_pred HHHHHHHHCCCcEEEeccCCCCCCCccc---HHHHHHHHHHHH-c--CCEEEEeeCcchHHHHHHHHHHCCC-CEEEECC
Confidence 4566677778887777521100 01222 334444554443 2 3677888763223456666667774 4667654
Q ss_pred CCc------h-hHHHHhhhcccCCCeeeeee--ecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 269 RSD------E-KLLSVFREGVKYGAGIGPGV--YDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 269 ~~~------~-~~l~~l~~~~~~~~~i~~Gv--vd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
..+ . .-.+.+.+... ...+.+++ +-+.+..-.........++++++.+|++|++..+||
T Consensus 182 g~p~~~~g~~~~~~~~~~~l~~-~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~ 249 (294)
T 4i6k_A 182 GRVDPVKGIEDPDYQKFLSLLN-VKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDW 249 (294)
T ss_dssp GCCCTTTCTTCHHHHHHHHHCC-TTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCB
T ss_pred CCCCCCCCCCCHHHHHHHHHHh-CCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCC
Confidence 321 0 11111211111 11233332 222111111234566788999999999999999986
No 69
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=65.91 E-value=37 Score=30.75 Aligned_cols=111 Identities=12% Similarity=0.124 Sum_probs=64.7
Q ss_pred CeEEecCCccCCC---CCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCC---cEEEEEcCCCch
Q 020229 201 SWIQFDEPLLVMD---LDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA---DVITIENSRSDE 272 (329)
Q Consensus 201 ~~IQiDEP~l~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~---d~~~lE~~~~~~ 272 (329)
+++-|=|-.|-+. .++ .+.+.|..-++.+.+... .+++||+- .-..++++.|.+.+. .++.-=|..+..
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~--lPviiH~r-~A~~d~l~iL~~~~~~~~~gViH~FsGs~e 206 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPY--LPFFFHCR-KSWSDLCQLNKELGYNGCKGVVHCFDGTEE 206 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTT--CCEEEEEE-SCHHHHHHHHHHTTCTTSCEEECSCCCCHH
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhC--CeEEEEeC-chHHHHHHHHHhcCCCCCcEEEEECCCCHH
Confidence 3566655444332 122 233456666665554243 67899986 667888888877643 233322233444
Q ss_pred hHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 273 KLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 273 ~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
.+.+.+. .|-.+++|-+..+ +.+ ..++++.+|.+++.+-+||
T Consensus 207 ~a~~~l~----lG~yis~~G~~~k-----~~~-----~~~~v~~iPldrlLlETDa 248 (325)
T 3ipw_A 207 EMNQILN----EGWDIGVTGNSLQ-----SIE-----LLNVMKQIPIERLHIETDC 248 (325)
T ss_dssp HHHHHHH----TTCEEEECSGGGS-----SHH-----HHHHHTTSCGGGEEECCCT
T ss_pred HHHHHHh----cCcEEeeCccccC-----cHH-----HHHHHHhCCcccEEEeCCC
Confidence 5555554 3666766654222 222 2368899999999999887
No 70
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=65.27 E-value=44 Score=29.50 Aligned_cols=113 Identities=10% Similarity=0.097 Sum_probs=63.3
Q ss_pred CeEEecCCccCCC--CCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCC---cEEEEEcCCCchh
Q 020229 201 SWIQFDEPLLVMD--LDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA---DVITIENSRSDEK 273 (329)
Q Consensus 201 ~~IQiDEP~l~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~---d~~~lE~~~~~~~ 273 (329)
+++-|=|-.|-+. .++ .+.+.|...++.+.+ . +.++.+|+- ....++++.|.+.+. .++.--|..+...
T Consensus 91 ~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e-~--~lPv~iH~r-~a~~~~l~il~~~~~~~~~~V~H~fsG~~e~ 166 (287)
T 3rcm_A 91 RVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQ-L--RLPVFLHER-DASERLLAILKDYRDHLTGAVVHCFTGEREA 166 (287)
T ss_dssp TEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHH-H--TCCEEEEEE-SCHHHHHHHHHTTGGGCSCEEECSCCCCHHH
T ss_pred CeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHH-h--CCCEEEEcC-CcHHHHHHHHHHcCCCCCeEEEEeCCCCHHH
Confidence 3566655444332 122 223445555555543 2 257899986 667788888877654 2333223334445
Q ss_pred HHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 274 LLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 274 ~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
+.+.+. .|-.+++|-.-+.. .. .+.++++++.+|.+++.+.+||
T Consensus 167 a~~~l~----~G~yis~~g~i~~~---k~----~~~l~~~v~~ip~drlLlETD~ 210 (287)
T 3rcm_A 167 LFAYLD----LDLHIGITGWICDE---RR----GTHLHPLVGNIPEGRLMLESDA 210 (287)
T ss_dssp HHHHHH----TTCEEEECGGGGCT---TT----CGGGHHHHTTSCTTSEEECCCT
T ss_pred HHHHHH----CCcEEEECchhccc---cC----HHHHHHHHHhcCCccEEEeccC
Confidence 555554 25555554211110 01 1356778889999999999997
No 71
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=65.17 E-value=69 Score=27.79 Aligned_cols=127 Identities=12% Similarity=0.094 Sum_probs=63.1
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc-----cCh--------HHHHHHHHhC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY-----SNF--------NDIIHSIIDM 258 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~-----Gn~--------~~i~~~l~~~ 258 (329)
++.+.+.|+|.|.+-==.+....+.+.+......++..... .++ +-+|+ |.+ -.++....++
T Consensus 38 ~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~----~Pi-I~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~ 112 (257)
T 2yr1_A 38 AEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGE----IPI-LFTIRSEREGGQPIPLNEAEVRRLIEAICRS 112 (257)
T ss_dssp HHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSS----CCE-EEECCCTTTTCCCCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccC----CCE-EEEEeecccCCCCCCCCHHHHHHHHHHHHHc
Confidence 34456789997765411222111223333233333333322 344 44454 333 1466777777
Q ss_pred C-CcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCC--CceEeCCC
Q 020229 259 D-ADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET--NILWVNPD 327 (329)
Q Consensus 259 ~-~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~--~~l~ispd 327 (329)
+ +|.+.+|+.... ...+.+......+..+++=.=|- ....+.+++..+++++.+ .|+ =++.+.|+
T Consensus 113 g~~d~iDvEl~~~~-~~~~l~~~~~~~~~kvI~S~Hdf--~~tP~~~el~~~~~~~~~-~gaDivKia~~a~ 180 (257)
T 2yr1_A 113 GAIDLVDYELAYGE-RIADVRRMTEECSVWLVVSRHYF--DGTPRKETLLADMRQAER-YGADIAKVAVMPK 180 (257)
T ss_dssp TCCSEEEEEGGGTT-HHHHHHHHHHHTTCEEEEEEEES--SCCCCHHHHHHHHHHHHH-TTCSEEEEEECCS
T ss_pred CCCCEEEEECCCCh-hHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHHHHHHh-cCCCEEEEEeccC
Confidence 7 999999997643 22223321111233343322221 123346899999988754 454 35555554
No 72
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=63.88 E-value=39 Score=29.13 Aligned_cols=84 Identities=11% Similarity=0.068 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCC-CCCceeEEeecccChHHHHHHHHhCCCc
Q 020229 183 KILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGV-QDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (329)
Q Consensus 183 ~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~lH~C~Gn~~~i~~~l~~~~~d 261 (329)
...+.+++.++...+.||++|.+--...... ..+.++.+.+.++.+.+-. +.++++.+|....+...+...+.+++-+
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~~~ 177 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIGFVPES-SSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVNRP 177 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCCCCT-TSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCccc-chHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcCCC
Confidence 3445677777788889999988853222222 3445566666666665422 2247888999866666666666666544
Q ss_pred EEEEEc
Q 020229 262 VITIEN 267 (329)
Q Consensus 262 ~~~lE~ 267 (329)
.+.+-+
T Consensus 178 ~~g~~~ 183 (290)
T 3tva_A 178 NLGINF 183 (290)
T ss_dssp TEEEEE
T ss_pred CEEEEe
Confidence 444443
No 73
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=63.55 E-value=60 Score=28.74 Aligned_cols=119 Identities=11% Similarity=-0.028 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++.+++.|+.--++.+ ......++++|+
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gada 105 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA---KRVPVIAGTGANNTVEAIALSQAAEKAGADY 105 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCE
Confidence 4566677788999998776533311 12455665444444433332 3478888888334543 344556789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+++
T Consensus 106 vlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 156 (297)
T 3flu_A 106 TLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILR 156 (297)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHH
Confidence 887632 2 2234444444210 11344555555544444445665543
No 74
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=63.36 E-value=40 Score=30.13 Aligned_cols=119 Identities=8% Similarity=-0.070 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..+ .++.+.+.+.++.+++.|+..-++.+ ......++++|+
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~---v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gada 112 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLE---VVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADA 112 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHH---HHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHH---HHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677888999998776633211 1244555533 33444555555688899988334543 344556789999
Q ss_pred EEEE--cCC----CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIE--NSR----SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE--~~~----~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+= +.. +...+.+.+...- ..+..+++=+++.++...=++|.+++
T Consensus 113 vlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 165 (307)
T 3s5o_A 113 AMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVT 165 (307)
T ss_dssp EEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred EEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHH
Confidence 9984 322 2234444444210 11334555555545544456666543
No 75
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=63.36 E-value=66 Score=27.44 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=14.2
Q ss_pred HHHHHHHhcCCCceEeCCCC
Q 020229 309 RINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 309 ri~~a~~~v~~~~l~ispdC 328 (329)
.++++++.++.+++.+.+||
T Consensus 198 ~~~~~~~~~~~drll~eTD~ 217 (272)
T 2y1h_A 198 QKQKLVKQLPLTSICLETDS 217 (272)
T ss_dssp HHHHHHHHSCGGGEEECCCT
T ss_pred HHHHHHHhCCHHHEEEecCC
Confidence 46666677777777777775
No 76
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=63.35 E-value=56 Score=29.49 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccCC--C---CChH-HHHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLVM--D---LDSH-KLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~~--~---~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.|.+..+.+.++|++.|+|.- |.... | -+.+ ..+...+.+..+.+.+ +.+
T Consensus 135 t~~e-I~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~p 211 (338)
T 1z41_A 135 SAEK-VKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGP 211 (338)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCc
Confidence 4444 467778888888888999999999984 22110 1 0111 1233445555555555 366
Q ss_pred eEEeeccc------C----hHHHHHHHHhCCCcEEEEE
Q 020229 239 IHTHMCYS------N----FNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 239 i~lH~C~G------n----~~~i~~~l~~~~~d~~~lE 266 (329)
+++-+... . +..++..|.+.++|.+++-
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 77776632 1 2257778888999999984
No 77
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=63.06 E-value=53 Score=29.86 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccC--CCC---ChHH-HHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLV--MDL---DSHK-LHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~--~~~---~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ +..+.+.|.+..+...++|++.|+|.- |..- .|- +.+. .+...+.++.+.+.++.+.+
T Consensus 134 t~~e-I~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~p 212 (343)
T 3kru_A 134 SVEE-IKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKP 212 (343)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSC
T ss_pred CHHH-HHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCC
Confidence 4444 467888888888888999999999993 3211 010 1121 23456777777777765667
Q ss_pred eEEeecccC----------hHHHHHHHHhCCCcEEEEE
Q 020229 239 IHTHMCYSN----------FNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 239 i~lH~C~Gn----------~~~i~~~l~~~~~d~~~lE 266 (329)
+++-+...+ +..++..|.+. +|.+++-
T Consensus 213 v~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 213 IFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp EEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred eEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEecc
Confidence 777665321 22577778888 9999984
No 78
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=62.00 E-value=64 Score=28.63 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+...+. +.+++.|++--++.+ ......++++|+
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~--rvpviaGvg~~~t~~ai~la~~a~~~Gada 106 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGT--KVKVLAGAGSNATHEAVGLAKFAKEHGADG 106 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTS--SCEEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC--CCeEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677888999998877533211 1245555544444443333331 378889988334544 344556789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+.+..
T Consensus 107 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 107 ILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHH
Confidence 988632 2 2234444444310 1134455555555555556677765443
No 79
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=61.88 E-value=37 Score=28.86 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=52.1
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCC
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
.++++.+.|+++||+.+-.. ... +.+..+.+..+ +..++..+.. ..+-++...++++|+++... .
T Consensus 34 ~~~al~~gGv~~iel~~k~~------~~~----~~i~~l~~~~~-~l~vgaGtvl--~~d~~~~A~~aGAd~v~~p~--~ 98 (224)
T 1vhc_A 34 LADTLAKNGLSVAEITFRSE------AAA----DAIRLLRANRP-DFLIAAGTVL--TAEQVVLAKSSGADFVVTPG--L 98 (224)
T ss_dssp HHHHHHHTTCCEEEEETTST------THH----HHHHHHHHHCT-TCEEEEESCC--SHHHHHHHHHHTCSEEECSS--C
T ss_pred HHHHHHHcCCCEEEEeccCc------hHH----HHHHHHHHhCc-CcEEeeCcEe--eHHHHHHHHHCCCCEEEECC--C
Confidence 35678889999999985431 111 23333444444 3555555543 23568888899999997553 2
Q ss_pred chhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 271 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
..+..+...+ .+....+|+ .|++++.+
T Consensus 99 d~~v~~~ar~---~g~~~i~Gv--------~t~~e~~~ 125 (224)
T 1vhc_A 99 NPKIVKLCQD---LNFPITPGV--------NNPMAIEI 125 (224)
T ss_dssp CHHHHHHHHH---TTCCEECEE--------CSHHHHHH
T ss_pred CHHHHHHHHH---hCCCEEecc--------CCHHHHHH
Confidence 2333333332 255566673 35666544
No 80
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=61.75 E-value=64 Score=28.51 Aligned_cols=121 Identities=12% Similarity=0.014 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++. +.+.+...++.+++.|+.--++.+. .....++++|+
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~---~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gada 101 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAIL---SSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARN 101 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHH---HHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHH---HHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCE
Confidence 4566677888899997776533211 124555553333 3344444445788999984355543 44446789999
Q ss_pred EEEEc--C-C-C-chhHHHHhhh---cccC-CCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIEN--S-R-S-DEKLLSVFRE---GVKY-GAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~--~-~-~-~~~~l~~l~~---~~~~-~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=- . . . .....+.+.. ..++ +..+++=+++.++...=++|.+++..
T Consensus 102 vlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 102 ILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp EEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 98752 2 3 2 2344444442 1100 23444444554554455677765554
No 81
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=61.73 E-value=77 Score=28.16 Aligned_cols=120 Identities=13% Similarity=0.036 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++...+.+..-+... ++.+++.++.--++.+ ......++++|+
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~st~~ai~la~~A~~~Gada 114 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG---DRAKLIAGVGTNNTRTSVELAEAAASAGADG 114 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEecCCCCCHHHHHHHHHHHHhcCCCE
Confidence 4556677788899998777533211 12455565444444333333 2478889988334444 344446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++.++...=++|.+++.
T Consensus 115 vlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 166 (304)
T 3cpr_A 115 LLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRL 166 (304)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 887532 2 2234444443210 113345555555444444456655443
No 82
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=61.46 E-value=77 Score=27.09 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=62.0
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc-----cCh-------HHHHHHHHhC-
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY-----SNF-------NDIIHSIIDM- 258 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~-----Gn~-------~~i~~~l~~~- 258 (329)
++.+.+.|++.|.+-==.+. +.+.+.+ .+.+..+.+.. ++.++ +-+|+ |.+ -.++....++
T Consensus 23 ~~~~~~~~~D~vElRvD~l~-~~~~~~v---~~~~~~lr~~~-~~~Pi-I~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~ 96 (238)
T 1sfl_A 23 KINHRIDAIDVLELRIDQFE-NVTVDQV---AEMITKLKVMQ-DSFKL-LVTYRTKLQGGYGQFTNDSYLNLISDLANIN 96 (238)
T ss_dssp HHHHTTTTCSEEEEECTTST-TCCHHHH---HHHHHHHC----CCSEE-EEECCBGGGTSCBCCCHHHHHHHHHHGGGCT
T ss_pred HHHhhhcCCCEEEEEecccc-cCCHHHH---HHHHHHHHHhc-cCCCE-EEEeeccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 44456779997766411222 1222333 33333333222 12455 44554 221 2466666777
Q ss_pred CCcEEEEEcCC--CchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCC--ceEeCCC
Q 020229 259 DADVITIENSR--SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETN--ILWVNPD 327 (329)
Q Consensus 259 ~~d~~~lE~~~--~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~--~l~ispd 327 (329)
.+|.+.+|+.. ......+.+......+..+++=.=|- ....+.+++..+++++. ..|++ ++.+.|+
T Consensus 97 ~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf--~~tp~~~el~~~~~~~~-~~gaDivKia~~a~ 166 (238)
T 1sfl_A 97 GIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNF--ESTPPLDELQFIFFKMQ-KFNPEYVKLAVMPH 166 (238)
T ss_dssp TCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEES--SCCCCHHHHHHHHHHHH-TTCCSEEEEEECCS
T ss_pred CCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCC--CCCcCHHHHHHHHHHHH-HcCCCEEEEEecCC
Confidence 69999999986 43322222221111233343322221 12344689999998875 44543 4555554
No 83
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=61.16 E-value=74 Score=27.05 Aligned_cols=88 Identities=15% Similarity=0.166 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeeccc-------ChHH
Q 020229 179 SLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-------NFND 250 (329)
Q Consensus 179 ~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-------n~~~ 250 (329)
+..+...+.+++.++...+.|+++|.+--.......+ .+.++.+.+.++++.+.. .++.+.++...| +...
T Consensus 82 ~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~-~gv~l~lEn~~~~~~~~~~~~~~ 160 (285)
T 1qtw_A 82 EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKT-QGVTAVIENTAGQGSNLGFKFEH 160 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHC-SSCEEEEECCCCCTTBCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhcc-CCCEEEEecCCCCCCcccCCHHH
Confidence 4445566677888888899999999875332222212 334566777777776432 257888988743 2345
Q ss_pred HHHHHHhC-CCc--EEEEEc
Q 020229 251 IIHSIIDM-DAD--VITIEN 267 (329)
Q Consensus 251 i~~~l~~~-~~d--~~~lE~ 267 (329)
+...+..+ +-+ ++.+|.
T Consensus 161 ~~~l~~~v~~~~~~g~~~D~ 180 (285)
T 1qtw_A 161 LAAIIDGVEDKSRVGVCIDT 180 (285)
T ss_dssp HHHHHHHCSCGGGEEEEEEH
T ss_pred HHHHHHhhcCccceEEEEEh
Confidence 56666666 443 455664
No 84
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=60.64 E-value=73 Score=28.80 Aligned_cols=88 Identities=9% Similarity=0.118 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCC-----------ccC--CC---CChHH-HHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDEP-----------LLV--MD---LDSHK-LHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP-----------~l~--~~---~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.|.+..+...++|++.|+|.-- ..- .| -+.+. .+...+.++.+.+.+ +.+
T Consensus 135 t~~e-I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v--~~p 211 (340)
T 3gr7_A 135 TKAD-IEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW--DGP 211 (340)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc--CCc
Confidence 4444 4778888888888889999999999832 110 01 01111 123345555555555 355
Q ss_pred eEEeeccc----------ChHHHHHHHHhCCCcEEEEE
Q 020229 239 IHTHMCYS----------NFNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 239 i~lH~C~G----------n~~~i~~~l~~~~~d~~~lE 266 (329)
|++-+... ++..++..|.+.++|.|++=
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 66666532 22367888889999999985
No 85
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=60.21 E-value=85 Score=27.93 Aligned_cols=128 Identities=10% Similarity=0.147 Sum_probs=71.0
Q ss_pred HHHHHHHHCCCCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEE
Q 020229 190 EVISELKAAGASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~ 264 (329)
+.++.+.+.|+++|-|-- |... .++ .++++.+..+++.+.+. +.++.+-+.. . .++..-++.+++.+.
T Consensus 56 ~~a~~~v~~GAdIIDIGgeSTrPga~-~v~~~eE~~Rv~pvI~~l~~~---~vpiSIDT~~--~-~Va~aAl~aGa~iIN 128 (294)
T 2dqw_A 56 ERAREMVAEGADILDLGAESTRPGAA-PVPVEEEKRRLLPVLEAVLSL---GVPVSVDTRK--P-EVAEEALKLGAHLLN 128 (294)
T ss_dssp HHHHHHHHHTCSEEEEECC------------CCHHHHHHHHHHHHHTT---CSCEEEECSC--H-HHHHHHHHHTCSEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHhC---CCeEEEECCC--H-HHHHHHHHhCCCEEE
Confidence 345678889999998884 2211 222 46778888888887753 3666666662 3 456666677888553
Q ss_pred EEcCC-CchhHHHHhhhcccCCCeeeeeeec---CCC----CCCCC-----HHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 265 IENSR-SDEKLLSVFREGVKYGAGIGPGVYD---IHS----PRIPS-----TEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 265 lE~~~-~~~~~l~~l~~~~~~~~~i~~Gvvd---~~~----~~~e~-----~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
+... ...+.++..++ .+..+++--.. +++ +..++ .+.+.+++++|. ..|-+++++.|.-|
T Consensus 129 -dVsg~~d~~m~~v~a~---~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~-~~Gi~~IilDPG~G 201 (294)
T 2dqw_A 129 -DVTGLRDERMVALAAR---HGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRAL-SAGVPQVVLDPGFG 201 (294)
T ss_dssp -CSSCSCCHHHHHHHHH---HTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHH-HTTCSCEEEECCTT
T ss_pred -ECCCCCChHHHHHHHH---hCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHH-HCCCCcEEEcCCCC
Confidence 3222 23466666664 24444442222 111 11122 334555555554 44656999998654
No 86
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=60.13 E-value=70 Score=28.18 Aligned_cols=120 Identities=8% Similarity=-0.093 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+...+ +.+++.|+.--++.+. .....++++|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pvi~Gvg~~~t~~ai~la~~a~~~Gada 99 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK---RIPVIAGTGSNNTAASIAMSKWAESIGVDG 99 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHhcCCCE
Confidence 5666778888999998776533211 124555554444443333332 4678889883345443 44446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhccc-CCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGVK-YGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~~-~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +.....+.+...-. .+..+++=+++.++...=++|.+++.
T Consensus 100 vlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (291)
T 3a5f_A 100 LLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKEL 151 (291)
T ss_dssp EEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 987632 2 23455555543111 12345544455444444455555443
No 87
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=59.98 E-value=54 Score=28.95 Aligned_cols=119 Identities=9% Similarity=-0.017 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++.+++.|+.--++.+ ......++++|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~Gada 99 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN---KRIPIIAGTGANSTREAIELTKAAKDLGADA 99 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 4556677788899997766533311 12455565444444333332 3478888988334544 344456789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . +.....+.+...- ..+..+++=+++..+...=++|.+++
T Consensus 100 vlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 150 (291)
T 3tak_A 100 ALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVR 150 (291)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHH
Confidence 887632 2 2234444443210 11344555455544444445555543
No 88
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=59.41 E-value=93 Score=27.35 Aligned_cols=127 Identities=13% Similarity=0.239 Sum_probs=76.1
Q ss_pred HHHHHHHCCCCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 191 VISELKAAGASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
.++.+.+.|+++|-|=- |... .++ .++++.+.++++.+.+ .+.++.+-++. ..++..-++.+++.+.
T Consensus 35 ~a~~m~~~GAdiIDIGgeSTRPga~-~vs~eeE~~Rv~pvi~~l~~---~~v~iSIDT~~---~~Va~~al~aGa~iIN- 106 (270)
T 4hb7_A 35 RVKAMIDEGADIIDVGGVSTRPGHE-MVTLEEELNRVLPVVEAIVG---FDVKISVDTFR---SEVAEACLKLGVDMIN- 106 (270)
T ss_dssp HHHHHHHTTCSEEEEESCCCSTTCC-CCCHHHHHHHHHHHHHHHTT---SSSEEEEECSC---HHHHHHHHHHTCCEEE-
T ss_pred HHHHHHHCCCCEEEECCccCCCCCC-CCchHHHHHHHHHHHHHhhc---CCCeEEEECCC---HHHHHHHHHhccceec-
Confidence 36678899999998852 3322 233 4667888888887753 25788888884 3567777888998775
Q ss_pred EcCC--CchhHHHHhhhcccCCCeeeeeeecCCCCCCCC-HH----HHHHHHHHHHHh-cCCCceEeCCCCC
Q 020229 266 ENSR--SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPS-TE----EIADRINKMLAV-LETNILWVNPDLH 329 (329)
Q Consensus 266 E~~~--~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~-~e----~i~~ri~~a~~~-v~~~~l~ispdCG 329 (329)
|... ...+.++.+.+ .+..+++== ...++.-++ .+ .+.+++.++.+. |+.+++++.|.-|
T Consensus 107 DVs~g~~d~~m~~~va~---~~~~~vlMH-~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiG 174 (270)
T 4hb7_A 107 DQWAGLYDHRMFQIVAK---YDAEIILMH-NGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIG 174 (270)
T ss_dssp ETTTTSSCTHHHHHHHH---TTCEEEEEC-CCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred cccccccchhHHHHHHH---cCCCeEEec-cccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCC
Confidence 3322 24567777775 233333211 011222222 23 344555555432 3458999999765
No 89
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=59.21 E-value=21 Score=31.80 Aligned_cols=61 Identities=16% Similarity=0.290 Sum_probs=38.8
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH-HHHHHHHhCCCcEEEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~-~i~~~l~~~~~d~~~lE 266 (329)
+++++..++|+++|++|-+ +++.+++.++ .+.. .+.+-.. |+.+ +-+..+.++++|+|++=
T Consensus 209 ~ea~eAl~aGaD~I~LDn~------~~~~l~~av~---~~~~------~v~ieaS-GGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 209 DELNQAIAAKADIVMLDNF------SGEDIDIAVS---IARG------KVALEVS-GNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHHTTCSEEEEESC------CHHHHHHHHH---HHTT------TCEEEEE-SSCCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHHcCCCEEEEcCC------CHHHHHHHHH---hhcC------CceEEEE-CCCCHHHHHHHHHcCCCEEEEC
Confidence 3566667799999999964 3455533333 2221 2234444 6553 46788899999999874
No 90
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=59.16 E-value=79 Score=28.03 Aligned_cols=120 Identities=11% Similarity=-0.001 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++...+.+..-+... ++.+++.++.--++.+. .....++++|+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gada 110 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD---KRVPVIAGTGSNNTHASIDLTKKATEVGVDA 110 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCceEEeCCCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888899998776533211 12455565444444333333 24678888883345443 44446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=.. . +...+.+.+...- ..+..+++=+++.++...=++|.+++.
T Consensus 111 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 162 (301)
T 1xky_A 111 VMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRL 162 (301)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 987532 2 2234444444210 113345554555444444456655443
No 91
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=58.63 E-value=45 Score=29.04 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=43.6
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHH--------------HHHHHHHHHHcC-CCCCceeEEeeccc-----Ch
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLH--------------AFIHSFRITNCG-VQDTTQIHTHMCYS-----NF 248 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~--------------~~~~~~~~~~~~-~~~~~~i~lH~C~G-----n~ 248 (329)
.+.++.|.++|+++|.++=|......+...++ ...+.++.+.+. . +.++++-+++. ..
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pv~lm~y~n~v~~~g~ 111 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP--TIPIGLLMYANLVFNNGI 111 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS--SSCEEEEECHHHHHTTCH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC--CCCEEEEEcccHHHHhhH
Confidence 45678899999999999988732222332221 112334444433 2 24555433321 11
Q ss_pred HHHHHHHHhCCCcEEEEE
Q 020229 249 NDIIHSIIDMDADVITIE 266 (329)
Q Consensus 249 ~~i~~~l~~~~~d~~~lE 266 (329)
...++.+.++++|++.+-
T Consensus 112 ~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp HHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 356677788899977763
No 92
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=58.14 E-value=73 Score=28.00 Aligned_cols=121 Identities=13% Similarity=-0.052 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+...+... ++.+++.++.--++.+. .....++++|+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~Gada 98 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFAEDVGADA 98 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888999998777533211 12455565444444333333 24788899983345443 44446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+++..
T Consensus 99 vlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 99 VLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 987632 2 2234444444210 1134455555655555555677766554
No 93
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=57.99 E-value=24 Score=31.62 Aligned_cols=61 Identities=20% Similarity=0.285 Sum_probs=38.3
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH-HHHHHHHhCCCcEEEEEc
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIEN 267 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~-~i~~~l~~~~~d~~~lE~ 267 (329)
++++..++|+++|++|-. +.+.++. +.+.+ . ..+.+-.. |+.+ +-+..+.++++|+|++=.
T Consensus 221 e~~eAl~aGaD~I~LDn~------~~~~l~~---av~~i----~--~~v~ieaS-GGI~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDNF------TLDMMRD---AVRVT----E--GRAVLEVS-GGVNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHHHHHTTCEEEEEESC------CHHHHHH---HHHHH----T--TSEEEEEE-SSCSTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCC------CHHHHHH---HHHHh----C--CCCeEEEE-cCCCHHHHHHHHHcCCCEEEECC
Confidence 456666789999999963 3445533 32322 1 12344455 6653 457788899999998764
No 94
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=57.94 E-value=41 Score=29.62 Aligned_cols=62 Identities=13% Similarity=0.008 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCC-CCCceeEEeeccc
Q 020229 183 KILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGV-QDTTQIHTHMCYS 246 (329)
Q Consensus 183 ~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~lH~C~G 246 (329)
...+.+++.++...+.||++|.+ |......+.+.++.+.+.++.+.+-. +.++.+.+|.+.+
T Consensus 111 ~~~~~~~~~i~~A~~lG~~~v~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 111 KFDEFWKKATDIHAELGVSCMVQ--PSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEE--CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHHHHcCCCEEEe--CCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 34456777788888999998887 44332234455566677777666422 2257888888743
No 95
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=57.85 E-value=70 Score=29.26 Aligned_cols=90 Identities=10% Similarity=0.157 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccCC--C---CChH-HHHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLVM--D---LDSH-KLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~~--~---~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ +..+.+.+.+..+...++|++.|+|.- |..-. | -+.+ ..+...+.++.+.+.+..+ +
T Consensus 152 t~~e-I~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~ 229 (364)
T 1vyr_A 152 ELDE-IPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-R 229 (364)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-c
Confidence 3444 356677777777788899999999974 22110 1 0111 1133455666666666544 6
Q ss_pred eEEeecccC--------------hHHHHHHHHhCCCcEEEEEc
Q 020229 239 IHTHMCYSN--------------FNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 239 i~lH~C~Gn--------------~~~i~~~l~~~~~d~~~lE~ 267 (329)
|++-+.-++ +..++..|.+.++|.+++-.
T Consensus 230 v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 230 IGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp EEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 666443221 12457777889999999864
No 96
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=57.84 E-value=81 Score=27.77 Aligned_cols=128 Identities=10% Similarity=0.109 Sum_probs=61.5
Q ss_pred HHHHHHHHHCCCCeEEe-cCCccCCCC---ChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh----HHHHHHHHhCC-
Q 020229 189 KEVISELKAAGASWIQF-DEPLLVMDL---DSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF----NDIIHSIIDMD- 259 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQi-DEP~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~----~~i~~~l~~~~- 259 (329)
.++++.+.+.|++-|.| +.-...+.. .... +.+.++.+.+ ++ +.. .++++..|. .++++.|.+.+
T Consensus 39 ~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~---l~~Ll~~l~~-~~-gi~-~ir~~~~~p~~l~~e~l~~l~~~g~ 112 (304)
T 2qgq_A 39 TREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQA---LPDLLRRLNS-LN-GEF-WIRVMYLHPDHLTEEIISAMLELDK 112 (304)
T ss_dssp HHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCC---HHHHHHHHHT-SS-SSC-EEEECCCCGGGCCHHHHHHHHHCTT
T ss_pred HHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHH---HHHHHHHHHh-cC-CCc-EEEEeeeecccCCHHHHHHHHhCCC
Confidence 34556677789986554 322222211 1122 3344444443 22 121 334443333 36888999988
Q ss_pred -CcEEEEEcCCCch-------------hHHHHhhhccc--CCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceE
Q 020229 260 -ADVITIENSRSDE-------------KLLSVFREGVK--YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILW 323 (329)
Q Consensus 260 -~d~~~lE~~~~~~-------------~~l~~l~~~~~--~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ 323 (329)
++.+++-.-.... +.++.+..... .+-.+...+|-. .--||.|++.+.++-+ +.++.+++.
T Consensus 113 ~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~~IvG--~PgEt~ed~~~t~~~l-~~l~~~~v~ 189 (304)
T 2qgq_A 113 VVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVG--FPGETEEDFEELKQFV-EEIQFDKLG 189 (304)
T ss_dssp BCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEEEEC--CTTCCHHHHHHHHHHH-HHHCCSEEE
T ss_pred CccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEEEEEe--CCCCCHHHHHHHHHHH-HHcCCCEEE
Confidence 7888765433222 22222221000 122222222221 1248888887777666 455667665
Q ss_pred eC
Q 020229 324 VN 325 (329)
Q Consensus 324 is 325 (329)
+.
T Consensus 190 ~~ 191 (304)
T 2qgq_A 190 AF 191 (304)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 97
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=57.64 E-value=85 Score=26.47 Aligned_cols=91 Identities=13% Similarity=0.156 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCC--cEEEEEcC-CCch-hHHHHhhhcccCCCeeeeeeecC
Q 020229 220 HAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA--DVITIENS-RSDE-KLLSVFREGVKYGAGIGPGVYDI 295 (329)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~--d~~~lE~~-~~~~-~~l~~l~~~~~~~~~i~~Gvvd~ 295 (329)
+.|...++.+.+ . +.++.+|+- .....+++.+.+.+. +++. .. +... ...+.+. .|-.+.+|-.-+
T Consensus 114 ~~f~~~~~~a~~-~--~~Pv~iH~~-~a~~~~~~il~~~~~~~~~i~--H~~~g~~~~~~~~~~----~g~~i~~~g~~~ 183 (259)
T 1zzm_A 114 WLLDEQLKLAKR-Y--DLPVILHSR-RTHDKLAMHLKRHDLPRTGVV--HGFSGSLQQAERFVQ----LGYKIGVGGTIT 183 (259)
T ss_dssp HHHHHHHHHHHH-T--TCCEEEEEE-SCHHHHHHHHHHHCCTTCEEE--TTCCSCHHHHHHHHH----TTCEEEECGGGG
T ss_pred HHHHHHHHHHHH-h--CCcEEEEec-ccHHHHHHHHHhcCCCCCEEE--EcCCCCHHHHHHHHH----CCCEEEECceee
Confidence 456666665554 3 367899975 456677777776543 4443 33 2232 3333343 254444442211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 296 HSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 296 ~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
. .. .+.++++++.+|.+|+.+++||
T Consensus 184 ~----~~----~~~~~~~~~~~~~dril~eTD~ 208 (259)
T 1zzm_A 184 Y----PR----ASKTRDVIAKLPLASLLLETDA 208 (259)
T ss_dssp C----TT----TCSHHHHHHHSCGGGEEECCCB
T ss_pred c----cc----cHHHHHHHHhCCHHHEEEecCC
Confidence 1 11 1246677788999999999997
No 98
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=57.32 E-value=82 Score=27.74 Aligned_cols=121 Identities=9% Similarity=-0.066 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.++..-++.+. .....++++|+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~A~~~Gada 98 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA---GRIKVIAGTGGNATHEAVHLTAHAKEVGADG 98 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888999998776533211 12455555444444333333 24788889883355543 44446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+++..
T Consensus 99 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 99 ALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 987632 2 2234444443210 1134455555555544445666665543
No 99
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=56.67 E-value=43 Score=29.13 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCCCCceeEEeecccC----hHHHHHHHHhCCCc--EEEEEcCCCchhHHHHhhhcccCCCeeeee
Q 020229 218 KLHAFIHSFRITNCGVQDTTQIHTHMCYSN----FNDIIHSIIDMDAD--VITIENSRSDEKLLSVFREGVKYGAGIGPG 291 (329)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn----~~~i~~~l~~~~~d--~~~lE~~~~~~~~l~~l~~~~~~~~~i~~G 291 (329)
+.+.|...++.+.+ . +.++.+|+-.++ ..++++.|.+.+++ ...+-.. +.....+.+. .|-.+++|
T Consensus 108 Q~~~f~~ql~lA~e-~--~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~-~~~~a~~~l~----~G~yis~~ 179 (261)
T 3guw_A 108 EIEVLKSQLELAKR-M--DVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV-NFETLDMVLE----TEYWIGLT 179 (261)
T ss_dssp HHHHHHHHHHHHHH-H--TCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC-CTTTHHHHHT----SSSEEEEE
T ss_pred HHHHHHHHHHHHHH-h--CCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC-CHHHHHHHHh----CCEEEEec
Confidence 34455555555543 2 257789986432 46778888776543 1222222 3333444443 35566665
Q ss_pred ----eecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 292 ----VYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 292 ----vvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
+++.+ +.+++++.+|.+++.+.+||
T Consensus 180 ~~pg~~t~~------------~~~~~v~~ipldrlLlETD~ 208 (261)
T 3guw_A 180 VQPGKLSAE------------DAARIVAEHGPERFMLNSDA 208 (261)
T ss_dssp CC-------------------CCTTGGGGCC-CCEEEECCC
T ss_pred CCCCcccHH------------HHHHHHHhCCcceEEEecCC
Confidence 33221 12467888999999999998
No 100
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=56.67 E-value=80 Score=28.02 Aligned_cols=120 Identities=8% Similarity=-0.057 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.++.--++.+. .....++++|+
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gada 109 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK---GKIKLIAHVGCVSTAESQQLAASAKRYGFDA 109 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhCCCCE
Confidence 4556677788899998777533211 12455565444444333332 34788899883355543 34445689999
Q ss_pred EEEEcC---C-CchhHHHHhhhccc-CC-CeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGVK-YG-AGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~~-~~-~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +...+.+.+...-. .+ ..+++=+++.++...=++|.+++.
T Consensus 110 vlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~L 162 (303)
T 2wkj_A 110 VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTL 162 (303)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred EEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHH
Confidence 887532 2 22344444432100 12 344544455444444556665544
No 101
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=56.27 E-value=82 Score=28.16 Aligned_cols=121 Identities=10% Similarity=-0.021 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.++.--++.+ ......++++|+
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gada 120 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAEKAGADA 120 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 4556677788999998776533211 12455555444444333332 3467888887334443 344556789999
Q ss_pred EEEEcC---CC-chhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---RS-DEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~~-~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=.. .. ...+.+.+...- ..+..+++=+++.++...=++|.+++..
T Consensus 121 vlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 173 (315)
T 3si9_A 121 VLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLC 173 (315)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHH
Confidence 987632 22 234444444210 1134555555655555455677665443
No 102
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.18 E-value=61 Score=29.87 Aligned_cols=90 Identities=8% Similarity=0.012 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccCC--C---CChH-HHHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLVM--D---LDSH-KLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~~--~---~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ +..+.+.+.+..+...++|++.|+|.- |..-. | -+.+ ..+...+.++.+.+.++.+ +
T Consensus 157 t~~e-I~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~ 234 (377)
T 2r14_A 157 ETDE-IPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-R 234 (377)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-c
Confidence 3444 356677777777778889999999973 22110 1 0111 1233345555555555433 6
Q ss_pred eEEeeccc---------C----hHHHHHHHHhCCCcEEEEEc
Q 020229 239 IHTHMCYS---------N----FNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 239 i~lH~C~G---------n----~~~i~~~l~~~~~d~~~lE~ 267 (329)
|++-+.-+ + +..++..|.+.++|.|++=.
T Consensus 235 v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 235 VGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp EEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 67765421 1 22467778889999999853
No 103
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=56.06 E-value=74 Score=28.14 Aligned_cols=73 Identities=14% Similarity=0.085 Sum_probs=44.7
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHHHhCCCcEEEEEc
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l~~~~~d~~~lE~ 267 (329)
+.++++.++|++.|.|-+..-. ..+... .+.++.+.+.++ +.++++|. -+|-...-.-.-.+.+++.+..=.
T Consensus 163 ~~~~~~~~~G~d~i~l~DT~G~--~~P~~~---~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv 236 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLGDTIGV--GTAGAT---RRLIEAVASEVP-RERLAGHFHDTYGQALANIYASLLEGIAVFDSSV 236 (302)
T ss_dssp HHHHHHHHTTCSEEEEEESSSC--CCHHHH---HHHHHHHTTTSC-GGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHcCCCEEEEeCCCCC--cCHHHH---HHHHHHHHHhCC-CCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecc
Confidence 3455677889999888866532 345554 334455555564 46778887 567654333333567888777654
Q ss_pred C
Q 020229 268 S 268 (329)
Q Consensus 268 ~ 268 (329)
.
T Consensus 237 ~ 237 (302)
T 2ftp_A 237 A 237 (302)
T ss_dssp G
T ss_pred c
Confidence 3
No 104
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=55.91 E-value=83 Score=28.13 Aligned_cols=120 Identities=11% Similarity=-0.052 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.++..+... ++.+++.++.-.++.+ ......++++|+
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gada 122 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA---HRVPTIVSVSDLTTAKTVRRAQFAESLGAEA 122 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888899998776533211 12455555444444333332 3467888888445544 344456789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++..+...=++|.+++.
T Consensus 123 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 123 VMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp EEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 988632 2 2334444444310 113445555555554444456655443
No 105
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=55.87 E-value=26 Score=25.46 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=33.3
Q ss_pred HHHHHHHHHHh-C----CCCCHHHHHHHHHHH----------HHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW-D----GKSSAEDLQKVSADL----------RSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~-~----g~is~~el~~~~~~~----------~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+|++|...|. + |.||.+||+.+.... -.++-+..+++ |.=.||...+..|+
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~--D~d~DG~Idf~EF~ 77 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSL--DENSDQQVDFQEYA 77 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHH--CTTSSSSBCHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHh--CCCCCCCCcHHHHH
Confidence 67899999985 2 489999999988751 12222333333 44457877765543
No 106
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=55.65 E-value=68 Score=29.51 Aligned_cols=85 Identities=9% Similarity=0.114 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccCC--C-C--ChH-HHHHHHHHHHHHHcCCCCCceeEEee
Q 020229 181 LPKILPIYKEVISELKAAGASWIQFDE-----------PLLVM--D-L--DSH-KLHAFIHSFRITNCGVQDTTQIHTHM 243 (329)
Q Consensus 181 ~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~~--~-~--~~~-~~~~~~~~~~~~~~~~~~~~~i~lH~ 243 (329)
+..+.+.+.+.++...++|++.|+|.- |..-. | . +.+ ..+...+.++.+.+.++.+ +|++-+
T Consensus 162 I~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrl 240 (376)
T 1icp_A 162 IPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRI 240 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEe
Confidence 356667777777888899999999984 22110 1 0 111 1233445555555545433 555544
Q ss_pred cc---------cC----hHHHHHHHHhCCCcEEEEE
Q 020229 244 CY---------SN----FNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 244 C~---------Gn----~~~i~~~l~~~~~d~~~lE 266 (329)
.- ++ +..++..|.+.++|.+++-
T Consensus 241 s~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 241 SPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp CTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 31 11 2357778888999999885
No 107
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=55.38 E-value=55 Score=27.52 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=44.8
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCC
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
.++++.+.|+++||+.+-... .. +.++.+.+..+ +..++..+..- .+-++...+.++|+++... .
T Consensus 33 ~~~al~~gGv~~iel~~k~~~------~~----~~i~~l~~~~~-~~~vgagtvi~--~d~~~~A~~aGAd~v~~p~--~ 97 (214)
T 1wbh_A 33 MAKALVAGGVRVLNVTLRTEC------AV----DAIRAIAKEVP-EAIVGAGTVLN--PQQLAEVTEAGAQFAISPG--L 97 (214)
T ss_dssp HHHHHHHTTCCEEEEESCSTT------HH----HHHHHHHHHCT-TSEEEEESCCS--HHHHHHHHHHTCSCEEESS--C
T ss_pred HHHHHHHcCCCEEEEeCCChh------HH----HHHHHHHHHCc-CCEEeeCEEEE--HHHHHHHHHcCCCEEEcCC--C
Confidence 356688899999999964311 11 12333333443 23333333211 2457778888999998653 2
Q ss_pred chhHHHHhhhcccCCCeeeee
Q 020229 271 DEKLLSVFREGVKYGAGIGPG 291 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~G 291 (329)
..+..+.-.. .+....+|
T Consensus 98 d~~v~~~~~~---~g~~~i~G 115 (214)
T 1wbh_A 98 TEPLLKAATE---GTIPLIPG 115 (214)
T ss_dssp CHHHHHHHHH---SSSCEEEE
T ss_pred CHHHHHHHHH---hCCCEEEe
Confidence 2333333332 24455667
No 108
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=54.54 E-value=1.6e+02 Score=28.66 Aligned_cols=127 Identities=9% Similarity=0.146 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhC--CCcEE
Q 020229 186 PIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDM--DADVI 263 (329)
Q Consensus 186 ~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~--~~d~~ 263 (329)
+...+..+.+.+.|+++|-|- |.....-..++++++++.+... . +.++.+-++ ++ .++..-++. +.+.+
T Consensus 340 ~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~---~--~vpisIDT~--~~-~v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 340 EIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYV---S--NVPLSLDIQ--NV-DLTERALRAYPGRSLF 410 (566)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHH---T--CSCEEEECC--CH-HHHHHHHHHCSSCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhh---C--CceEEEeCC--CH-HHHHHHHHhcCCCCEE
Confidence 344556778889999999998 6433222345666666666433 2 366777666 23 456666665 66654
Q ss_pred EEEcCC-Cc--hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHH----HHHHHHHHHHHhcCC-CceEeCCCC
Q 020229 264 TIENSR-SD--EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTE----EIADRINKMLAVLET-NILWVNPDL 328 (329)
Q Consensus 264 ~lE~~~-~~--~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e----~i~~ri~~a~~~v~~-~~l~ispdC 328 (329)
. +... .. .+.++..++ .+..+++--.+.. .-.|.+ ...++++.+. ..|- +++++.|..
T Consensus 411 N-dis~~~~~~~~~~~~~~~---~g~~vV~m~~~~~--~p~t~~~~~~~l~~~~~~a~-~~Gi~~~IilDPg~ 476 (566)
T 1q7z_A 411 N-SAKVDEEELEMKINLLKK---YGGTLIVLLMGKD--VPKSFEERKEYFEKALKILE-RHDFSDRVIFDPGV 476 (566)
T ss_dssp E-EEESCHHHHHHHHHHHHH---HCCEEEEESCSSS--CCCSHHHHHHHHHHHHHHHH-HTTCGGGEEEECCC
T ss_pred E-ECCcchhhHHHHHHHHHH---hCCeEEEEeCCCC--CcCCHHHHHHHHHHHHHHHH-HCCCCCcEEEeCCC
Confidence 3 2111 12 344555554 2444444333321 112233 4444455454 4444 899999876
No 109
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=54.46 E-value=96 Score=27.50 Aligned_cols=120 Identities=7% Similarity=-0.061 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.|+.-.++.+ ......++++|+
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gada 113 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG---DRARVIAGAGTYDTAHSIRLAKACAAEGAHG 113 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677888899997776533211 12455555444444333332 3478888886345554 344456789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=.. . +.....+.+...- ..+..+++=+++.++...=++|.+++.
T Consensus 114 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 114 LLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRAL 165 (304)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 988632 2 2344544444311 113445555555555555567776544
No 110
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=54.35 E-value=67 Score=30.61 Aligned_cols=68 Identities=13% Similarity=0.230 Sum_probs=38.0
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEe--ecccChHHHHHHH--HhCCCcEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTH--MCYSNFNDIIHSI--IDMDADVIT 264 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH--~C~Gn~~~i~~~l--~~~~~d~~~ 264 (329)
.+.++++.++||+.|.|=|..-. +.+..+..++.++.... + .++++| -=+|-.. ...+ .+.+++.+.
T Consensus 161 ~~~a~~l~~~Gad~I~l~DT~G~--~~P~~v~~lv~~l~~~~-~----~~i~~H~Hnd~GlAv--AN~laAv~AGa~~VD 231 (464)
T 2nx9_A 161 VDVAQQLAELGVDSIALKDMAGI--LTPYAAEELVSTLKKQV-D----VELHLHCHSTAGLAD--MTLLKAIEAGVDRVD 231 (464)
T ss_dssp HHHHHHHHHTTCSEEEEEETTSC--CCHHHHHHHHHHHHHHC-C----SCEEEEECCTTSCHH--HHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEcCCCCC--cCHHHHHHHHHHHHHhc-C----CeEEEEECCCCChHH--HHHHHHHHhCCCEEE
Confidence 33455677899999999887633 34666655555544433 2 344555 4445432 3333 456666554
Q ss_pred E
Q 020229 265 I 265 (329)
Q Consensus 265 l 265 (329)
.
T Consensus 232 ~ 232 (464)
T 2nx9_A 232 T 232 (464)
T ss_dssp E
T ss_pred E
Confidence 3
No 111
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=54.33 E-value=86 Score=27.60 Aligned_cols=119 Identities=9% Similarity=-0.020 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.|+...++.+. .....++++|+
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gada 100 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD---KRVPVIAGTGTNDTEKSIQASIQAKALGADA 100 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHHHcCCCE
Confidence 5666677888999998777633211 12455555444444333332 34788889874455543 44446689999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++.++...=++|.+++
T Consensus 101 vlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 151 (292)
T 3daq_A 101 IMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEI 151 (292)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHH
Confidence 887632 2 2234444444200 01344555555545555555666543
No 112
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=54.24 E-value=96 Score=27.60 Aligned_cols=120 Identities=8% Similarity=-0.017 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+.. .++.+++.|+.--++.+ ......++++|+
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~---~grvpviaGvg~~~t~~ai~la~~A~~~Gada 106 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHV---AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAM 106 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHH---TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHh---CCCCcEEEecCCchHHHHHHHHHHHHHcCCCE
Confidence 4566677888999997777532211 1245555544444433333 23478889988444544 344556789999
Q ss_pred EEEE--cC----C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIE--NS----R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE--~~----~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+= |. . +...+.+.+...- ..+..+++=+++. +...=++|.+++..
T Consensus 107 vlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~~~~La 161 (309)
T 3fkr_A 107 VMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPFLARMA 161 (309)
T ss_dssp EEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHHHHHHH
T ss_pred EEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHHHHHHH
Confidence 9875 32 2 2234444444210 1133455545553 44444566655443
No 113
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=54.08 E-value=73 Score=28.52 Aligned_cols=121 Identities=9% Similarity=-0.053 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+...+.. .++++++.|+.--++.+ ......++++|+
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~---~grvpviaGvg~~~t~~ai~la~~a~~~Gada 109 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAV---GPDFPIMAGVGAHSTRQVLEHINDASVAGANY 109 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHH---CTTSCEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHh---CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677888999998777633211 1245555544444433333 23478888887334443 344556789999
Q ss_pred EEEEcC---C---CchhHHHHhhhcc-cCCCeeeeeeecCCC-CCCCCHHHHHHHH
Q 020229 263 ITIENS---R---SDEKLLSVFREGV-KYGAGIGPGVYDIHS-PRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~---~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~-~~~e~~e~i~~ri 310 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++.++ ...=++|.+++..
T Consensus 110 vlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La 165 (318)
T 3qfe_A 110 VLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIA 165 (318)
T ss_dssp EEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHH
T ss_pred EEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHH
Confidence 987532 2 1234455554310 124456666666654 4445577665544
No 114
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=53.88 E-value=1.2e+02 Score=27.10 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCC--CCeEEe-cCCccCCCCC------hHHH-HHHHHHHHHHHcCC--CCCceeEEee
Q 020229 176 SLLSLLPKILPIYKEVISELKAAG--ASWIQF-DEPLLVMDLD------SHKL-HAFIHSFRITNCGV--QDTTQIHTHM 243 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG--~~~IQi-DEP~l~~~~~------~~~~-~~~~~~~~~~~~~~--~~~~~i~lH~ 243 (329)
+..++...+++-.+..+..|.++| ++++|+ .||...+-.+ .+.+ +.+..+++.+.+.- + ..++.+|+
T Consensus 102 ~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p-~~~v~~h~ 180 (334)
T 1fob_A 102 DLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLAT-TPKIMIHL 180 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSS-CCEEEEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCC-CCeEEEEc
Confidence 456788888887778888898887 556755 5887543211 1223 44455566665443 4 46889999
Q ss_pred ccc-Ch---HHHHHHHHhC------CCcEEEEEcC
Q 020229 244 CYS-NF---NDIIHSIIDM------DADVITIENS 268 (329)
Q Consensus 244 C~G-n~---~~i~~~l~~~------~~d~~~lE~~ 268 (329)
+.| +. ...++.+... .+|.|++-+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syY 215 (334)
T 1fob_A 181 DDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYY 215 (334)
T ss_dssp SCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECC
T ss_pred CCcCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCC
Confidence 964 21 1233555443 5799999975
No 115
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=53.78 E-value=82 Score=28.43 Aligned_cols=120 Identities=11% Similarity=0.019 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.++.--++.+. .....++++|+
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~Gada 132 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR---GRRTLMAGIGALRTDEAVALAKDAEAAGADA 132 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 4556677788899998776533211 12455555444444333333 34788899883355543 34446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++.++...=++|.+++.
T Consensus 133 vlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~L 184 (332)
T 2r8w_A 133 LLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRL 184 (332)
T ss_dssp EEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 987532 2 2234444444210 113345554555444444566666544
No 116
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=53.67 E-value=60 Score=30.22 Aligned_cols=89 Identities=7% Similarity=0.102 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccCC--C-C--ChH-HHHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLVM--D-L--DSH-KLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~~--~-~--~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.+.+.++...++|++.|+|.- |..-- | . +.+ ..+...+.++.+.+.++.+ +
T Consensus 162 t~~e-I~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~-~ 239 (402)
T 2hsa_B 162 GTYE-ISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGAD-R 239 (402)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCC-c
Confidence 4444 366777888888888899999999995 33111 1 0 111 1233445555555555433 5
Q ss_pred eEEeeccc---------C----hHHHHHHHHhCC------CcEEEEE
Q 020229 239 IHTHMCYS---------N----FNDIIHSIIDMD------ADVITIE 266 (329)
Q Consensus 239 i~lH~C~G---------n----~~~i~~~l~~~~------~d~~~lE 266 (329)
|++-+.-+ + +..++..|.+.+ +|.+++=
T Consensus 240 V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~ 286 (402)
T 2hsa_B 240 VGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVT 286 (402)
T ss_dssp EEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEe
Confidence 66665422 1 225677777788 9999984
No 117
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=53.51 E-value=90 Score=27.48 Aligned_cols=120 Identities=7% Similarity=0.012 Sum_probs=64.1
Q ss_pred HHHHHHHHHHH-CCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCc
Q 020229 187 IYKEVISELKA-AGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (329)
Q Consensus 187 ~~~~~i~~l~~-aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d 261 (329)
++++.++.+.+ .|++-|.+--.+-- ..++.++...+.+..-+... ++.+++.++.--++.+. .....++++|
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gad 101 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK---DQIALIAQVGSVNLKEAVELGKYATELGYD 101 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 45666778888 99998777533211 12455555444444333333 34788899983345443 4444568999
Q ss_pred EEEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 262 VITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 262 ~~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
++.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+++.
T Consensus 102 avlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 154 (293)
T 1f6k_A 102 CLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGEL 154 (293)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHH
Confidence 9887632 2 2234444443200 012344544455444444456665443
No 118
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=53.43 E-value=43 Score=28.48 Aligned_cols=84 Identities=12% Similarity=0.143 Sum_probs=47.0
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCC
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
.++++.+.|+++||+.+-. .... +.+..+.+..+ +..++..+.. ..+-++...+.++|+++... .
T Consensus 43 ~~~al~~gGv~~iel~~k~------~~~~----~~i~~l~~~~~-~~~igagtvl--~~d~~~~A~~aGAd~v~~p~--~ 107 (225)
T 1mxs_A 43 LADALAAGGIRTLEVTLRS------QHGL----KAIQVLREQRP-ELCVGAGTVL--DRSMFAAVEAAGAQFVVTPG--I 107 (225)
T ss_dssp HHHHHHHTTCCEEEEESSS------THHH----HHHHHHHHHCT-TSEEEEECCC--SHHHHHHHHHHTCSSEECSS--C
T ss_pred HHHHHHHCCCCEEEEecCC------ccHH----HHHHHHHHhCc-ccEEeeCeEe--eHHHHHHHHHCCCCEEEeCC--C
Confidence 3566888999999998532 1122 22343444444 3555555543 22457888889999998542 2
Q ss_pred chhHHHHhhhcccCCCeeeeee
Q 020229 271 DEKLLSVFREGVKYGAGIGPGV 292 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~Gv 292 (329)
..+..+.-.. .+..+++|+
T Consensus 108 d~~v~~~~~~---~g~~~i~G~ 126 (225)
T 1mxs_A 108 TEDILEAGVD---SEIPLLPGI 126 (225)
T ss_dssp CHHHHHHHHH---CSSCEECEE
T ss_pred CHHHHHHHHH---hCCCEEEee
Confidence 2333333332 244556673
No 119
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=53.25 E-value=66 Score=28.27 Aligned_cols=70 Identities=9% Similarity=0.023 Sum_probs=41.1
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHHHhCCCcEEEEEc
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l~~~~~d~~~lE~ 267 (329)
++.+.++||+.|.|-++.-. ..+... .+.++.+.+.++ +.++++|. -+|-...-.-.-.+.+++.+..=.
T Consensus 161 ~~~~~~~G~d~i~l~Dt~G~--~~P~~~---~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv 232 (295)
T 1ydn_A 161 TEQLFSLGCHEVSLGDTIGR--GTPDTV---AAMLDAVLAIAP-AHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASV 232 (295)
T ss_dssp HHHHHHHTCSEEEEEETTSC--CCHHHH---HHHHHHHHTTSC-GGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBT
T ss_pred HHHHHhcCCCEEEecCCCCC--cCHHHH---HHHHHHHHHhCC-CCeEEEEECCCcchHHHHHHHHHHhCCCEEEecc
Confidence 45566789999988875432 345554 334444555554 35677776 667543222233467888777643
No 120
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=53.00 E-value=87 Score=28.66 Aligned_cols=126 Identities=9% Similarity=0.119 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCc-------cCC--CC-------ChHHH-HHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDEPL-------LVM--DL-------DSHKL-HAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~-------l~~--~~-------~~~~~-~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.|.+..+...++|++.|+|.--- |+. +- +.+.. +...+.++.+.+.++.+ +
T Consensus 152 t~~e-I~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~-~ 229 (361)
T 3gka_A 152 ELDE-IPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA-R 229 (361)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-e
Confidence 3344 46777888888888899999999999532 111 00 11111 23345555555544433 5
Q ss_pred eEEeeccc---------C----hHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHH
Q 020229 239 IHTHMCYS---------N----FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEE 305 (329)
Q Consensus 239 i~lH~C~G---------n----~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~ 305 (329)
|++-+... + +..++..|.+.++|.|++-....+....+.+++.++ ...++.|- + ++++
T Consensus 230 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~-iPvi~~Gg-------i-t~e~ 300 (361)
T 3gka_A 230 VGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFG-GPFIVNEN-------F-TLDS 300 (361)
T ss_dssp EEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHC-SCEEEESS-------C-CHHH
T ss_pred EEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcC-CCEEEeCC-------C-CHHH
Confidence 66655521 1 234677788899999998654322223344443211 23444443 3 5666
Q ss_pred HHHHHHH
Q 020229 306 IADRINK 312 (329)
Q Consensus 306 i~~ri~~ 312 (329)
..+.+++
T Consensus 301 a~~~l~~ 307 (361)
T 3gka_A 301 AQAALDA 307 (361)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 5555543
No 121
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=52.70 E-value=1.5e+02 Score=27.72 Aligned_cols=29 Identities=14% Similarity=0.061 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 300 IPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 300 ~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
.-|.+++++.|.-+.+.+|.+.|.+.+|.
T Consensus 333 ~atl~~~~~Hidhi~~~~G~dhVgiGsDf 361 (417)
T 2rag_A 333 RGDFDLYMKSMLHVLKVAGPKGVCVGADW 361 (417)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTSEEECCCT
T ss_pred CCCHHHHHHHHHHHHHhcCCceEEEccCC
Confidence 35799999999999999999999999884
No 122
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=52.69 E-value=98 Score=26.81 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc------c-ChHHH
Q 020229 179 SLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY------S-NFNDI 251 (329)
Q Consensus 179 ~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~------G-n~~~i 251 (329)
+..+...+.+++.++...+.||++|.+--.........+.++.+.+.++.+.+.. .++.+.++... + +...+
T Consensus 87 ~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a-~gv~l~lEn~~~~~~~~~~t~~~~ 165 (303)
T 3aal_A 87 DTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTRE-QNVQIALETMAGKGSECGRTFEEL 165 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSS-CSCEEEEECCCCCTTEECSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCCCCCccCCCHHHH
Confidence 3445556677788888889999998875322211112345577888888887655 46888898873 2 33445
Q ss_pred HHHHHhCCC-c--EEEEEcC
Q 020229 252 IHSIIDMDA-D--VITIENS 268 (329)
Q Consensus 252 ~~~l~~~~~-d--~~~lE~~ 268 (329)
...+..++- + ++.+|..
T Consensus 166 ~~li~~v~~~~~vg~~lD~~ 185 (303)
T 3aal_A 166 AYIIDGVAYNDKLSVCFDTC 185 (303)
T ss_dssp HHHHHHCTTGGGEEEEEEHH
T ss_pred HHHHHhcCCCCCEEEEEEcc
Confidence 555555652 3 4556643
No 123
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=52.69 E-value=78 Score=27.98 Aligned_cols=120 Identities=12% Similarity=-0.054 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+...+ +.+++.++.--++.+. .....++++|+
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~Gada 98 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG---RVPVIAGAGSNNPVEAVRYAQHAQQAGADA 98 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC---CCeEEEccCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888899998776533211 124555554444443333332 4678889883345443 44446689999
Q ss_pred EEEEcC--C--CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS--R--SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~--~--~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+++.
T Consensus 99 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 150 (297)
T 2rfg_A 99 VLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARL 150 (297)
T ss_dssp EEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 987532 2 2234444443210 113445555555555445566666544
No 124
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=52.66 E-value=83 Score=28.52 Aligned_cols=121 Identities=12% Similarity=0.003 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.++.--++.+. .....++++|+
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~Gada 129 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD---RRVPVLIGTGGTNARETIELSQHAQQAGADG 129 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 4556677888899997776532211 12455555444444333333 24788889884345443 34445689999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++..+...=++|.+++..
T Consensus 130 vlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 130 IVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 887632 2 2334444444210 1133455555554444444666665543
No 125
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=52.54 E-value=41 Score=30.41 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=37.6
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH-HHHHHHHhCCCcEEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~-~i~~~l~~~~~d~~~lE 266 (329)
++++..++|+++|++|-+ +++.++..++. +. +.+ .+-.. |+.+ ..+..+.++++|+|++=
T Consensus 243 ea~eAl~aGaD~I~LDn~------~~~~l~~av~~---l~----~~v--~ieaS-GGIt~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 243 ELEEAISAGADIIMLDNF------SLEMMREAVKI---NA----GRA--ALENS-GNITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHTTCSEEEEESC------CHHHHHHHHHH---HT----TSS--EEEEE-SSCCHHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHcCCCEEEECCC------CHHHHHHHHHH---hC----CCC--eEEEE-CCCCHHHHHHHHHcCCCEEEEC
Confidence 455566789999999964 34555433332 21 122 33444 6553 56788889999999874
No 126
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=52.24 E-value=1e+02 Score=27.50 Aligned_cols=119 Identities=9% Similarity=-0.055 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++.+++.++..-++.+ ......++++|+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~st~eai~la~~A~~~Gada 121 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK---GRIPVIAGTGANSTREAVALTEAAKSGGADA 121 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCE
Confidence 4556677788899998777533211 12455665444444333332 3467888888334544 344556789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . +.....+.+...- ..+..+++=+++..+...=++|.+++
T Consensus 122 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 172 (314)
T 3qze_A 122 CLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVER 172 (314)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHH
Confidence 987632 2 2234444444210 11344555555545544555666543
No 127
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=52.01 E-value=33 Score=24.51 Aligned_cols=52 Identities=12% Similarity=0.154 Sum_probs=33.1
Q ss_pred HHHHHHHHHHh--C---CCCCHHHHHHHHHHH----------HHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW--D---GKSSAEDLQKVSADL----------RSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~--~---g~is~~el~~~~~~~----------~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+|++|...|. . |.||.+||+.+.... -.++-+..++ +|.=.||...+..|+
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~--~D~d~DG~Idf~EF~ 76 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSN--LDSNRDNEVDFQEYC 76 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHH--HCTTSSSSBCHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHH--HCCCCCCCCcHHHHH
Confidence 67899999996 2 479999999988751 1222223333 344467777765543
No 128
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=51.96 E-value=93 Score=27.62 Aligned_cols=121 Identities=7% Similarity=-0.024 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+...+... ++++++.++.--++.+. .....++++|+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gada 110 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD---GKIPVIVGAGTNSTEKTLKLVKQAEKLGANG 110 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEcCCCccHHHHHHHHHHHHhcCCCE
Confidence 4556677888899998776533211 12455565444444333333 24678889883345543 34445689999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=-. . +.....+.+...- ..+..+++=+++.++...=++|.+++..
T Consensus 111 vlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 111 VLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 987632 2 2234454544311 1133455555555554445677665543
No 129
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=51.70 E-value=63 Score=28.29 Aligned_cols=60 Identities=12% Similarity=0.189 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCC-CCce--eEEeec
Q 020229 183 KILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQ-DTTQ--IHTHMC 244 (329)
Q Consensus 183 ~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--i~lH~C 244 (329)
+..+.+++.++...+.||++|.+ |......+.+..+.+.+.++++.+-.. .+++ +.+|.+
T Consensus 105 ~~~~~~~~~i~~A~~lG~~~v~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~ 167 (303)
T 3l23_A 105 KIMEYWKATAADHAKLGCKYLIQ--PMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNH 167 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEE--CSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEE--CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccC
Confidence 44556777788889999999988 333222344555666777766654321 2467 888876
No 130
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=51.66 E-value=90 Score=27.83 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHH---HHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIH---SIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~---~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++.+++.++.- ++.+.++ ...++++|+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~-st~~ai~la~~A~~~Gada 109 (314)
T 3d0c_A 34 GLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN---GRATVVAGIGY-SVDTAIELGKSAIDSGADC 109 (314)
T ss_dssp HHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECS-SHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC---CCCeEEecCCc-CHHHHHHHHHHHHHcCCCE
Confidence 4566677888899997765532211 12455555444444333332 34788999996 7765443 446789999
Q ss_pred EEEE
Q 020229 263 ITIE 266 (329)
Q Consensus 263 ~~lE 266 (329)
+.+=
T Consensus 110 vlv~ 113 (314)
T 3d0c_A 110 VMIH 113 (314)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9875
No 131
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=51.65 E-value=73 Score=28.09 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=38.3
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEe--ecccChHHHHHHH--HhCCCcEEEE
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTH--MCYSNFNDIIHSI--IDMDADVITI 265 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH--~C~Gn~~~i~~~l--~~~~~d~~~l 265 (329)
++.+.++|++.|.|-|..-. +.+..+..++..+.+. ++ +.++++| .-+|-.. ...+ .+.+++.+..
T Consensus 162 ~~~~~~~Ga~~i~l~DT~G~--~~P~~~~~lv~~l~~~---~~-~~~i~~H~Hn~~Gla~--An~laA~~aGa~~vd~ 231 (298)
T 2cw6_A 162 TKKFYSMGCYEISLGDTIGV--GTPGIMKDMLSAVMQE---VP-LAALAVHCHDTYGQAL--ANTLMALQMGVSVVDS 231 (298)
T ss_dssp HHHHHHTTCSEEEEEETTSC--CCHHHHHHHHHHHHHH---SC-GGGEEEEEBCTTSCHH--HHHHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEecCCCCC--cCHHHHHHHHHHHHHh---CC-CCeEEEEECCCCchHH--HHHHHHHHhCCCEEEe
Confidence 45677889999998877532 4566665444444433 33 2445555 4456432 2333 4678887765
No 132
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=50.88 E-value=34 Score=25.19 Aligned_cols=52 Identities=12% Similarity=0.154 Sum_probs=33.5
Q ss_pred HHHHHHHHHHh--C---CCCCHHHHHHHHHHH----------HHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW--D---GKSSAEDLQKVSADL----------RSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~--~---g~is~~el~~~~~~~----------~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+|++|...|. . |.||.+||+.+.... -.++-+..++ +|.=.||...+..|+
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~--~D~dgDG~Idf~EF~ 79 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSN--LDSNRDNEVDFQEYC 79 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHH--HCTTCSSSBCHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHH--HcCCCCCCCcHHHHH
Confidence 67899999995 2 479999999988751 1222222333 344467877766543
No 133
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=50.68 E-value=1.4e+02 Score=26.64 Aligned_cols=130 Identities=13% Similarity=0.205 Sum_probs=71.3
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHh--CCCcEEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIID--MDADVITI 265 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~--~~~d~~~l 265 (329)
.+.++.+.+.|+++|-|--. +...+ .++++++++++..+.+.. +.++.+-+.. + .++..-++ .+++.+.
T Consensus 40 ~~~A~~~v~~GAdiIDIg~g--~~~v~~~eem~rvv~~i~~~~~~~--~vpisIDT~~--~-~V~eaaL~~~~Ga~iIN- 111 (300)
T 3k13_A 40 LSIARQQVEDGALVIDVNMD--DGLLDARTEMTTFLNLIMSEPEIA--RVPVMIDSSK--W-EVIEAGLKCLQGKSIVN- 111 (300)
T ss_dssp HHHHHHHHHTTCSEEEEECC--CTTSCHHHHHHHHHHHHHTCHHHH--TSCEEEECSC--H-HHHHHHHHHCSSCCEEE-
T ss_pred HHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHHHHHHHhhhcC--CCeEEEeCCC--H-HHHHHHHHhcCCCCEEE-
Confidence 34466778999999888641 11123 345566666655321111 3566666652 3 45666566 4666443
Q ss_pred EcCCC--ch---hHHHHhhhcccCCCeeeeeeecCC-CC-CCCCHHHHHHHHHHHH-HhcC--CCceEeCCCCC
Q 020229 266 ENSRS--DE---KLLSVFREGVKYGAGIGPGVYDIH-SP-RIPSTEEIADRINKML-AVLE--TNILWVNPDLH 329 (329)
Q Consensus 266 E~~~~--~~---~~l~~l~~~~~~~~~i~~Gvvd~~-~~-~~e~~e~i~~ri~~a~-~~v~--~~~l~ispdCG 329 (329)
+.... .. +.++.+++ .+..+++--.|.+ .+ ..+..-++.+|+.+++ +..| ++++++.|..|
T Consensus 112 dIs~~~~d~~~~~~~~l~a~---~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig 182 (300)
T 3k13_A 112 SISLKEGEEVFLEHARIIKQ---YGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVL 182 (300)
T ss_dssp EECSTTCHHHHHHHHHHHHH---HTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCC
T ss_pred eCCcccCChhHHHHHHHHHH---hCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCC
Confidence 22211 22 45566654 2555555444321 11 1333446778888875 5554 58999998764
No 134
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=50.40 E-value=87 Score=28.61 Aligned_cols=90 Identities=8% Similarity=0.082 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccC--CC---CChHH-HHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLV--MD---LDSHK-LHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~--~~---~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ +..+.+.+.+.++.+.++|++.|+|.- |... .| -+.+. .+...+.+..+.+.+..+ +
T Consensus 152 t~~e-I~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-p 229 (365)
T 2gou_A 152 TKAD-IAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE-R 229 (365)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-c
Confidence 4444 466777787878888899999999974 3211 11 01111 123344445454444333 5
Q ss_pred eEEeecc-c--------C----hHHHHHHHHhCCCcEEEEEc
Q 020229 239 IHTHMCY-S--------N----FNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 239 i~lH~C~-G--------n----~~~i~~~l~~~~~d~~~lE~ 267 (329)
|++-+.- + + +..++..|.+.++|.+++=.
T Consensus 230 v~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 230 VGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp EEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 6664431 1 1 12467778889999999864
No 135
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=50.31 E-value=76 Score=26.41 Aligned_cols=61 Identities=7% Similarity=0.074 Sum_probs=37.8
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE 266 (329)
.++++.+.|+++||+.+-. +... +.+..+.+ + +..++..+.. + .+-++...+.++|+++..
T Consensus 30 ~~~~l~~gGv~~iel~~k~------~~~~----~~i~~~~~--~-~~~~gag~vl-~-~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 30 LARVLEEEGVGALEITLRT------EKGL----EALKALRK--S-GLLLGAGTVR-S-PKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp HHHHHHHTTCCEEEEECSS------THHH----HHHHHHTT--S-SCEEEEESCC-S-HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHcCCCEEEEeCCC------hHHH----HHHHHHhC--C-CCEEEeCeEe-e-HHHHHHHHHcCCCEEEcC
Confidence 3556778999999998543 1122 23344443 3 3555555543 2 255777888899998865
No 136
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=50.14 E-value=83 Score=28.41 Aligned_cols=111 Identities=13% Similarity=0.120 Sum_probs=60.1
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHH--HhCCCcEE
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSI--IDMDADVI 263 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l--~~~~~d~~ 263 (329)
+.+.++.+.++||+.|.|-|..-. ..+..+..++..+. +.+| +.++++|. =+|-. +...+ .+.+++.+
T Consensus 171 ~~~~~~~~~~~Ga~~i~l~DT~G~--~~P~~v~~lv~~l~---~~~p-~~~i~~H~Hnd~GlA--~AN~laAv~aGa~~v 242 (337)
T 3ble_A 171 VKSLVEHLSKEHIERIFLPDTLGV--LSPEETFQGVDSLI---QKYP-DIHFEFHGHNDYDLS--VANSLQAIRAGVKGL 242 (337)
T ss_dssp HHHHHHHHHTSCCSEEEEECTTCC--CCHHHHHHHHHHHH---HHCT-TSCEEEECBCTTSCH--HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEecCCCC--cCHHHHHHHHHHHH---HhcC-CCeEEEEecCCcchH--HHHHHHHHHhCCCEE
Confidence 344456788899999999887633 34666644444443 3343 35566664 34533 23333 45688876
Q ss_pred EEEcCC----C-c---hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHh
Q 020229 264 TIENSR----S-D---EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV 316 (329)
Q Consensus 264 ~lE~~~----~-~---~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~ 316 (329)
.-=... . + ++..-.+.. + .|+ ++ ...++...++.+.+.++...
T Consensus 243 d~tv~GlG~~aGN~~~E~lv~~L~~-----~---~g~-~t-gidl~~L~~~~~~v~~~~~~ 293 (337)
T 3ble_A 243 HASINGLGERAGNTPLEALVTTIHD-----K---SNS-KT-NINEIAITEASRLVEVFSGK 293 (337)
T ss_dssp EEBGGGCSSTTCBCBHHHHHHHHHH-----H---SSC-CC-CCCGGGHHHHHHHHHHHHCC
T ss_pred EEecccccccccchhHHHHHHHHHH-----h---cCC-CC-CcCHHHHHHHHHHHHHHHCC
Confidence 654431 1 1 233333432 1 132 22 23467777888877777653
No 137
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=50.12 E-value=33 Score=24.97 Aligned_cols=51 Identities=10% Similarity=0.034 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhC------CCCCHHHHHHHHHHHH----------HHHHHHHHHhCCccccCCCcccchh
Q 020229 15 RELKFALESFWD------GKSSAEDLQKVSADLR----------SSIWKQMSEAGIKYIPSNTFSYYDQ 67 (329)
Q Consensus 15 ~eL~~a~~~~~~------g~is~~el~~~~~~~~----------~~~i~~Q~~~Gld~itdGe~~~~d~ 67 (329)
.+|++|...|.+ |.||.+||+.+..... .++-+...+ +|.=.||...+..|
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~--~D~d~DG~Idf~EF 77 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQN--LDANHDGRISFDEY 77 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHH--SCCCSSCCBCHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHH--hCCCCCCCCcHHHH
Confidence 678999999854 7899999999886531 112222222 45556777776554
No 138
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=50.04 E-value=43 Score=28.30 Aligned_cols=69 Identities=9% Similarity=0.113 Sum_probs=39.7
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++.+.++|+++|++++-.....-... + +.+..+.+.. +.++.+|--.-+... ++.++++++|.+.+-..
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~----~-~~i~~i~~~~--~ipv~v~ggi~~~~~-~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSN----H-ELLAEVVGKL--DVQVELSGGIRDDES-LAAALATGCARVNVGTA 105 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCC----H-HHHHHHHHHC--SSEEEEESSCCSHHH-HHHHHHTTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEEcCcccccCCCh----H-HHHHHHHHhc--CCcEEEECCCCCHHH-HHHHHHcCCCEEEECch
Confidence 34677899999999863322111110 1 2223333323 256677655444443 77777889999988764
No 139
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=49.93 E-value=1.2e+02 Score=26.61 Aligned_cols=120 Identities=13% Similarity=-0.065 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHH---HHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS---IIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~---l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++...+.+..-+...+ +.+++.|+.--++.+.++. ..++++|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~Gada 99 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG---RIPVIAGTGANATAEAISLTQRFNDSGIVG 99 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHTTTSSCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHhcCCCE
Confidence 4556677788899998776533211 124555654444443333332 4678889883355544443 35679999
Q ss_pred EEEEcC---C-CchhHHHHhhhccc-CCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGVK-YGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~~-~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+=-. . +.....+.+...-. .+..+++=+++.++...=++|.+++.
T Consensus 100 vlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (292)
T 2ojp_A 100 CLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRL 151 (292)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHH
Confidence 987632 2 23445555543111 12344544455444444567766554
No 140
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=49.92 E-value=1.4e+02 Score=27.36 Aligned_cols=118 Identities=8% Similarity=-0.074 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+.. .+.++++.++..-++.+. .....++++|+
T Consensus 81 al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~---~grvpViaGvg~~st~eai~la~~A~~~Gada 157 (360)
T 4dpp_A 81 AYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCF---GGSIKVIGNTGSNSTREAIHATEQGFAVGMHA 157 (360)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHH---TTTSEEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHh---CCCCeEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677788999998777532211 1245555544444333333 234788888873345443 34446789999
Q ss_pred EEEEc--CC--CchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIEN--SR--SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~--~~--~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=- .. +...+.+.+...-. ...+++=+++.++...=++|.+++
T Consensus 158 vlvv~PyY~k~sq~gl~~hf~~IA~-a~PiilYNiP~rTg~~ls~e~l~~ 206 (360)
T 4dpp_A 158 ALHINPYYGKTSIEGLIAHFQSVLH-MGPTIIYNVPGRTGQDIPPRAIFK 206 (360)
T ss_dssp EEEECCCSSCCCHHHHHHHHHTTGG-GSCEEEEECHHHHSCCCCHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHH-hCCEEEEeCCcccCCCCCHHHHHH
Confidence 88763 22 23455555553111 223444445545444445665544
No 141
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=49.78 E-value=85 Score=27.98 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+.. .+.. ++.+++.++.--++.+. .....++++|+
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~---v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gada 105 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRF---IKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAG 105 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHH---HHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHH---HHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677888999998777532211 124555554444433 3333 35788899874455443 44445779999
Q ss_pred EEEE--cCC-CchhHHHHhhh---cccCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIE--NSR-SDEKLLSVFRE---GVKYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE--~~~-~~~~~l~~l~~---~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+= |.. +...+.+.+.. ..+.+..+++=+++.++...=++|.+++..
T Consensus 106 vlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 106 VMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp EEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHH
Confidence 8873 211 22344444442 111114455444554444444566554443
No 142
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=49.76 E-value=95 Score=28.43 Aligned_cols=126 Identities=11% Similarity=0.129 Sum_probs=68.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCc-------cCC--CC-------ChH-HHHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDEPL-------LVM--DL-------DSH-KLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~-------l~~--~~-------~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.|.+..+...++|++.|+|.--- |+. +- +.+ ..+...+.++.+.+.++.+ +
T Consensus 144 t~~e-I~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~-~ 221 (362)
T 4ab4_A 144 ETEE-INDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ-R 221 (362)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-c
Confidence 4444 46788888888888899999999999532 111 00 111 1233345555555544433 5
Q ss_pred eEEeeccc---------C----hHHHHHHHHhCCCcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHH
Q 020229 239 IHTHMCYS---------N----FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEE 305 (329)
Q Consensus 239 i~lH~C~G---------n----~~~i~~~l~~~~~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~ 305 (329)
|++-+... + +..++..|.+.++|.|++-....+....+.+++.++ ...++.|- + ++++
T Consensus 222 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~-iPvi~~Gg-------i-t~e~ 292 (362)
T 4ab4_A 222 VGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAFG-GPYIVNER-------F-DKAS 292 (362)
T ss_dssp EEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHC-SCEEEESS-------C-CHHH
T ss_pred eEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCC-CCEEEeCC-------C-CHHH
Confidence 55555421 1 224677788899999998644322223334443211 23344443 3 5666
Q ss_pred HHHHHHH
Q 020229 306 IADRINK 312 (329)
Q Consensus 306 i~~ri~~ 312 (329)
..+.+++
T Consensus 293 a~~~l~~ 299 (362)
T 4ab4_A 293 ANAALAS 299 (362)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 5555543
No 143
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=49.73 E-value=1e+02 Score=29.99 Aligned_cols=69 Identities=20% Similarity=0.263 Sum_probs=38.0
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEe--ecccChHHHHHHH--HhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTH--MCYSNFNDIIHSI--IDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH--~C~Gn~~~i~~~l--~~~~~d~~~l 265 (329)
+.++++.++||+.|.|=|..-. +.+..+..++.++..... ++.++++| .=+|-.- ...+ .+.+++.+..
T Consensus 179 ~~a~~l~~~Gad~I~L~DT~G~--~~P~~v~~lv~~l~~~~p---~~i~I~~H~Hnd~GlAv--AN~laAveAGa~~VD~ 251 (539)
T 1rqb_A 179 KLAGQLLDMGADSIALKDMAAL--LKPQPAYDIIKAIKDTYG---QKTQINLHCHSTTGVTE--VSLMKAIEAGVDVVDT 251 (539)
T ss_dssp HHHHHHHHTTCSEEEEEETTCC--CCHHHHHHHHHHHHHHHC---TTCCEEEEEBCTTSCHH--HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCCC--cCHHHHHHHHHHHHHhcC---CCceEEEEeCCCCChHH--HHHHHHHHhCCCEEEE
Confidence 3445677889999999887633 346666555555544432 12455555 3445432 2333 3556665543
No 144
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=49.09 E-value=97 Score=26.46 Aligned_cols=89 Identities=10% Similarity=0.021 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCC----CChHHHHHHHHHHHHHHcCC-CCCceeEEeecc-------c
Q 020229 179 SLLPKILPIYKEVISELKAAGASWIQFDEPLLVMD----LDSHKLHAFIHSFRITNCGV-QDTTQIHTHMCY-------S 246 (329)
Q Consensus 179 ~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~i~lH~C~-------G 246 (329)
+..+...+.+++.++...+.|+++|.+--..-... ...+.++.+.+.++.+.+-. +.++.+.+|..- .
T Consensus 97 ~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~ 176 (287)
T 3kws_A 97 AIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLR 176 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccC
Confidence 34455666788888888999999888742211111 12344566666666665422 124678888551 2
Q ss_pred ChHHHHHHHHhCCCcEEEEEc
Q 020229 247 NFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 247 n~~~i~~~l~~~~~d~~~lE~ 267 (329)
+...+...+.+++-+.+.+-+
T Consensus 177 ~~~~~~~ll~~v~~~~vg~~~ 197 (287)
T 3kws_A 177 QVADAASLCRDINNPGVRCMG 197 (287)
T ss_dssp CHHHHHHHHHHHCCTTEEEEE
T ss_pred CHHHHHHHHHHcCCCCeeEEe
Confidence 344566666666544444443
No 145
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=48.78 E-value=1.2e+02 Score=26.62 Aligned_cols=121 Identities=10% Similarity=-0.041 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++...+.+..-+... ++.+++.++.-.++.+. .....++++|+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~~~Gada 98 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN---GRVPVIAGAGSNSTAEAIAFVRHAQNAGADG 98 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHHHHcCCCE
Confidence 4566677888999998776533211 12455555444444333333 24678889884355543 44446789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRI 310 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri 310 (329)
+.+=.. . +.....+.+...- ..+..+++=+++.++...=++|.+++..
T Consensus 99 vlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (292)
T 2vc6_A 99 VLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIF 151 (292)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 987633 2 2234444443200 1134455555555454445666665543
No 146
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=48.48 E-value=65 Score=28.28 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=42.8
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHH--------------HHHHHHHHHHcCCCCCceeEEeeccc-----ChH
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLH--------------AFIHSFRITNCGVQDTTQIHTHMCYS-----NFN 249 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~lH~C~G-----n~~ 249 (329)
.+.+++|.++|+++|.|-=|.--...+...++ .+.+.+.++.+... +.++++-+++. ..+
T Consensus 37 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~-~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 37 LAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP-ETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHHhHH
Confidence 44567788999999999977611111221221 12334444443312 36777766632 124
Q ss_pred HHHHHHHhCCCcEEEE
Q 020229 250 DIIHSIIDMDADVITI 265 (329)
Q Consensus 250 ~i~~~l~~~~~d~~~l 265 (329)
..+..+.++++|++-+
T Consensus 116 ~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLI 131 (271)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 5567777788888554
No 147
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=48.47 E-value=1.7e+02 Score=28.41 Aligned_cols=85 Identities=15% Similarity=0.209 Sum_probs=54.2
Q ss_pred HHHHHHHCC-----CCeEEecC----CccCCCCC-hHHHHHHHHHHHHHHcC-CC--CCceeEEeecccChHHHHHHHHh
Q 020229 191 VISELKAAG-----ASWIQFDE----PLLVMDLD-SHKLHAFIHSFRITNCG-VQ--DTTQIHTHMCYSNFNDIIHSIID 257 (329)
Q Consensus 191 ~i~~l~~aG-----~~~IQiDE----P~l~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~i~lH~C~Gn~~~i~~~l~~ 257 (329)
.++.+.+.| +++|-|-- |... .++ .+++++++.+++.+.+. .+ .++++.+-++. ..++..-++
T Consensus 254 ~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~-~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~---a~VaeaAl~ 329 (545)
T 2bmb_A 254 DIIKLCKDALYLHESVIIDVGGCSTRPNSI-QASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYR---SNVAKEAIK 329 (545)
T ss_dssp HHHHHHHHHHTTCSCEEEEEECSCCSTTCC-CCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCC---HHHHHHHHH
T ss_pred HHHHHHHcCCCCCCceEEEECCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCc---HHHHHHHHH
Confidence 456788899 99998874 3322 233 46678888888888641 11 13567777773 356788888
Q ss_pred CCCcEEEEEcCC--CchhHHHHhhh
Q 020229 258 MDADVITIENSR--SDEKLLSVFRE 280 (329)
Q Consensus 258 ~~~d~~~lE~~~--~~~~~l~~l~~ 280 (329)
.++|.|. |... ...+.++.+++
T Consensus 330 aGadIIN-DVsg~~~d~~m~~vva~ 353 (545)
T 2bmb_A 330 VGVDIIN-DISGGLFDSNMFAVIAE 353 (545)
T ss_dssp TTCCEEE-ETTTTSSCTTHHHHHHT
T ss_pred cCCCEEE-eCCCCcCChHHHHHHHH
Confidence 8998774 3332 23466767764
No 148
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=47.41 E-value=29 Score=30.89 Aligned_cols=64 Identities=14% Similarity=0.146 Sum_probs=36.9
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH-HHHHHHHhCCCcEEEEEc
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIEN 267 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~-~i~~~l~~~~~d~~~lE~ 267 (329)
++++..++|+++|++|- ++++.++..++.++... + ..+ +=.- |+.+ +-+..+.++++|+|++=.
T Consensus 205 ea~eA~~aGaD~I~LDn------~~~e~l~~av~~l~~~~---~-~v~--ieAS-GGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 205 DALRAVEAGADIVMLDN------LSPEEVKDISRRIKDIN---P-NVI--VEVS-GGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHTTCSEEEEES------CCHHHHHHHHHHHHHHC---T-TSE--EEEE-ECCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHHHHhhccC---C-Cce--EEEE-CCCCHHHHHHHHHcCCCEEEEeH
Confidence 45555678999999996 34555544444433221 1 122 2222 5442 456667788999988754
No 149
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=46.91 E-value=1.6e+02 Score=27.44 Aligned_cols=87 Identities=6% Similarity=0.111 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc---c-----ChHHHH
Q 020229 181 LPKILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY---S-----NFNDII 252 (329)
Q Consensus 181 ~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~---G-----n~~~i~ 252 (329)
++.+.+.|++.++.|.+.|+|+|-+. ++ .+..+..+..++++. .+ .++.+.+++ | ++...+
T Consensus 134 ~eel~~~~~eqi~~L~~~GvDlll~E--Ti---~~~~Eakaa~~a~~~--~~----lPv~iS~T~~~~G~l~G~~~~~~~ 202 (406)
T 1lt8_A 134 ETEVKKVFLQQLEVFMKKNVDFLIAE--YF---EHVEEAVWAVETLIA--SG----KPVAATMAIGPEGDLHGVPPGEAA 202 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEC--CC---SCHHHHHHHHHHHGG--GT----SCEEEEECCBTTBCTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEc--cc---CCHHHHHHHHHHHHH--hC----CcEEEEEEECCCCCcCCCcHHHHH
Confidence 36778899999999999999998776 11 123344434444322 12 456666665 2 234677
Q ss_pred HHHHhCCCcEEEEEcCCCchhHHHHh
Q 020229 253 HSIIDMDADVITIENSRSDEKLLSVF 278 (329)
Q Consensus 253 ~~l~~~~~d~~~lE~~~~~~~~l~~l 278 (329)
..+.+++++++.+=....+......+
T Consensus 203 ~~l~~~~~~avGvNC~~gP~~~~~~l 228 (406)
T 1lt8_A 203 VRLVKAGASIIGVNCHFDPTISLKTV 228 (406)
T ss_dssp HHHHTTTCSEEEEESSSCHHHHHHHH
T ss_pred HHhhcCCCCEEEecCCCCHHHHHHHH
Confidence 88888899999999865554443333
No 150
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=46.52 E-value=35 Score=25.00 Aligned_cols=49 Identities=6% Similarity=0.078 Sum_probs=33.1
Q ss_pred HHHHHHHHHHh-C----CCCCHHHHHHHHHH-------------HHHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW-D----GKSSAEDLQKVSAD-------------LRSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~-~----g~is~~el~~~~~~-------------~~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+|++|...|. + |.||.+||+.+... .+.++++. +|.=.||...+..|+
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~-----~D~dgDG~Idf~EF~ 76 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSV-----LDTNKDCEVDFVEYV 76 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHH-----HHHCCCSCEEHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHH-----hCCCCCCCCcHHHHH
Confidence 67899999996 2 67999999998864 23333332 344457887766553
No 151
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=46.32 E-value=97 Score=25.87 Aligned_cols=87 Identities=9% Similarity=0.047 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCC-hHHHHHHHHHHHHHHcCCC-CCceeEEeecc-----c----ChHH
Q 020229 182 PKILPIYKEVISELKAAGASWIQFDEPLLVMDLD-SHKLHAFIHSFRITNCGVQ-DTTQIHTHMCY-----S----NFND 250 (329)
Q Consensus 182 ~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~lH~C~-----G----n~~~ 250 (329)
+...+.+++.++...+.|+++|.+--.......+ .+.++.+.+.++++.+-.. .++++.+|... + +...
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~ 160 (260)
T 1k77_A 81 HEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQ 160 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHHH
Confidence 3444567777788889999999875322221222 2344666677666654322 24788888762 2 2345
Q ss_pred HHHHHHhCCCc--EEEEEcC
Q 020229 251 IIHSIIDMDAD--VITIENS 268 (329)
Q Consensus 251 i~~~l~~~~~d--~~~lE~~ 268 (329)
+...+.+++-+ ++.+|..
T Consensus 161 ~~~l~~~~~~~~~g~~~D~~ 180 (260)
T 1k77_A 161 ALAIVEEVARDNVFIQLDTF 180 (260)
T ss_dssp HHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHhCCCCEEEEeeHH
Confidence 55555555544 4555543
No 152
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=46.28 E-value=1.1e+02 Score=26.37 Aligned_cols=76 Identities=8% Similarity=0.076 Sum_probs=43.3
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHH--------------HHHHHHHHHHcCCCCCceeEEeeccc-----ChH
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLH--------------AFIHSFRITNCGVQDTTQIHTHMCYS-----NFN 249 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~lH~C~G-----n~~ 249 (329)
.+.+++|.++|+++|.+.=|......+...++ ...+.+..+.+..+ +.++++-.++. ...
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~~Pi~~m~y~n~v~~~g~~ 112 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP-DIPFLLMTYYNPIFRIGLE 112 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TSCEEEECCHHHHHHHCHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC-CCCEEEEecCcHHHHhhHH
Confidence 44567888999999999988732212222221 12233445544442 25666633321 113
Q ss_pred HHHHHHHhCCCcEEEE
Q 020229 250 DIIHSIIDMDADVITI 265 (329)
Q Consensus 250 ~i~~~l~~~~~d~~~l 265 (329)
..+....++++|++.+
T Consensus 113 ~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIV 128 (262)
T ss_dssp HHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4556678889998776
No 153
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=45.49 E-value=1.1e+02 Score=27.20 Aligned_cols=119 Identities=10% Similarity=-0.011 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCC-c
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDA-D 261 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~-d 261 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+. +.+...++.+++.|+..-++.+. .....++++ |
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~---~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~d 105 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAA---VQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFA 105 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHH---HHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHH---HHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCc
Confidence 4556677788999997776543311 12455555444443 33333345788999883355543 344466786 9
Q ss_pred EEEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 262 VITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 262 ~~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
++.+=.. . +.....+.+...- ..+..+++=+++.++...=++|.+.+
T Consensus 106 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 157 (311)
T 3h5d_A 106 AGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLR 157 (311)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHH
Confidence 9887632 2 2234444444310 11344555555544444445665543
No 154
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=45.24 E-value=64 Score=30.17 Aligned_cols=84 Identities=13% Similarity=0.204 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC------CC--Ch----HHHHHHHHHHHHHHcCCCCCceeEEeecc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM------DL--DS----HKLHAFIHSFRITNCGVQDTTQIHTHMCY 245 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~------~~--~~----~~~~~~~~~~~~~~~~~~~~~~i~lH~C~ 245 (329)
++.+.+.|+++.+ ..|.++|.++++||+-.... ++ ++ ..++.+.+. +.+ . +++.+|++..
T Consensus 35 e~~i~~~ad~~~~--~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~---ih~-~--Glk~Giw~~~ 106 (404)
T 3hg3_A 35 EKLFMEMAELMVS--EGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANY---VHS-K--GLKLGIYADV 106 (404)
T ss_dssp HHHHHHHHHHHHH--TTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHH---HHH-T--TCEEEEEEES
T ss_pred HHHHHHHHHHHHH--CCcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHHHH---HHH-C--CCeeEEEecC
Confidence 5556666666543 23667899999999876542 11 11 223333333 322 1 3567776544
Q ss_pred cC------------hHHHHHHHHhCCCcEEEEEcCC
Q 020229 246 SN------------FNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 246 Gn------------~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
|+ .+.-+..+.+-+||.+-+|++.
T Consensus 107 g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~C~ 142 (404)
T 3hg3_A 107 GNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAGCY 142 (404)
T ss_dssp SSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEECCS
T ss_pred CccccCCCCccHHHHHHHHHHHHHhCCcEEEecCcC
Confidence 32 2356778888999999999875
No 155
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=44.62 E-value=98 Score=27.60 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHH---HHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIH---SIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~---~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.++.-+... ++++++.++. .++.+.+. ...++++|+
T Consensus 34 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~---grvpViaGvg-~~t~~ai~la~~A~~~Gada 109 (316)
T 3e96_A 34 HYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH---GRALVVAGIG-YATSTAIELGNAAKAAGADA 109 (316)
T ss_dssp HHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEEC-SSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEEeC-cCHHHHHHHHHHHHhcCCCE
Confidence 4566677888999997766532211 12455555444444333332 3478889987 47765444 445679999
Q ss_pred EEEE
Q 020229 263 ITIE 266 (329)
Q Consensus 263 ~~lE 266 (329)
+.+=
T Consensus 110 vlv~ 113 (316)
T 3e96_A 110 VMIH 113 (316)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8874
No 156
>3a1g_A RNA-directed RNA polymerase catalytic subunit; influenza virus, RNA polymerase, nucleotide-binding, nucleotidyltransferase, nucleus, RNA replication; 1.70A {Influenza a virus} PDB: 2ztt_A
Probab=43.96 E-value=22 Score=24.80 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHH
Q 020229 15 RELKFALESFWDGKSSAEDLQKVSA 39 (329)
Q Consensus 15 ~eL~~a~~~~~~g~is~~el~~~~~ 39 (329)
+-+..|+-+|+.|.|+.+|++++.+
T Consensus 44 rlr~dAr~d~esGri~k~efeeim~ 68 (80)
T 3a1g_A 44 RARIDARIDFESGRIKKEEFTEIMK 68 (80)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHhhhhhhccccHHHHHHHHH
Confidence 4577889999999999999998754
No 157
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=43.04 E-value=1.4e+02 Score=25.04 Aligned_cols=86 Identities=10% Similarity=0.165 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEecCCccCC-CCC-hHHHHHHHHHHHHHHcCCC-CCceeEEeeccc------ChHHHH
Q 020229 182 PKILPIYKEVISELKAAGASWIQFDEPLLVM-DLD-SHKLHAFIHSFRITNCGVQ-DTTQIHTHMCYS------NFNDII 252 (329)
Q Consensus 182 ~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~lH~C~G------n~~~i~ 252 (329)
+...+.+++.++...+.|+++|.+- |.... ..+ .+.++.+.+.++.+.+... .++++.+|...+ +...+.
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~-~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~ 158 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAV-PLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAY 158 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEE-CCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHH
Confidence 4455667777888888999988883 22221 233 3345666666666654322 246888887743 234455
Q ss_pred HHHHhCCCc--EEEEEcC
Q 020229 253 HSIIDMDAD--VITIENS 268 (329)
Q Consensus 253 ~~l~~~~~d--~~~lE~~ 268 (329)
..+.+++-+ ++.+|..
T Consensus 159 ~l~~~~~~~~~g~~~D~~ 176 (278)
T 1i60_A 159 EIVNTVNRDNVGLVLDSF 176 (278)
T ss_dssp HHHHHHCCTTEEEEEEHH
T ss_pred HHHHHhCCCCeeEEEEeE
Confidence 555555433 4555643
No 158
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=43.03 E-value=1.5e+02 Score=25.07 Aligned_cols=106 Identities=13% Similarity=0.092 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCceeEEeecccC-hHHHHHHHHhCCCc--EEEEEcCC--CchhHHHHhhhcccCCCeeee
Q 020229 216 SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSN-FNDIIHSIIDMDAD--VITIENSR--SDEKLLSVFREGVKYGAGIGP 290 (329)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn-~~~i~~~l~~~~~d--~~~lE~~~--~~~~~l~~l~~~~~~~~~i~~ 290 (329)
..+.+.|...++.+.+ . +.++.+|+-.+. ..++++.+.+.+++ .+.+.... ...+..+.+.+ .|-.+.+
T Consensus 134 ~~~~~~~~~~~~~a~~-~--~~pv~iH~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~---~G~~i~~ 207 (291)
T 1bf6_A 134 PLEEKVFIAAALAHNQ-T--GRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMID---LGAYVQF 207 (291)
T ss_dssp HHHHHHHHHHHHHHHH-H--CCCEEEECGGGCSHHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHH---TTCEEEE
T ss_pred HHHHHHHHHHHHHHHH-H--CCeEEEeCCCCCChHHHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHH---CCCEEEE
Confidence 3333444545444433 2 256789973211 22567777776654 56666653 23333333332 2545555
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCCC
Q 020229 291 GVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDLH 329 (329)
Q Consensus 291 Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdCG 329 (329)
+-+. +.. .-..+.-.+.++++++..+.+++.+++||+
T Consensus 208 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~dril~~TD~p 244 (291)
T 1bf6_A 208 DTIG-KNS-YYPDEKRIAMLHALRDRGLLNRVMLSMDIT 244 (291)
T ss_dssp CCTT-CTT-TSCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred ccCc-ccC-CCCHHHHHHHHHHHHHhCCCCeEEEcCCCC
Confidence 3221 000 012334556788888988999999999984
No 159
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=42.85 E-value=2.1e+02 Score=26.57 Aligned_cols=115 Identities=16% Similarity=0.147 Sum_probs=62.1
Q ss_pred CCeEEecCCccCCC---CChH--HHHHHHHHHHHHHcCCC--CCceeEEeecccChHHHHHHHHhCC-------------
Q 020229 200 ASWIQFDEPLLVMD---LDSH--KLHAFIHSFRITNCGVQ--DTTQIHTHMCYSNFNDIIHSIIDMD------------- 259 (329)
Q Consensus 200 ~~~IQiDEP~l~~~---~~~~--~~~~~~~~~~~~~~~~~--~~~~i~lH~C~Gn~~~i~~~l~~~~------------- 259 (329)
-+++-|=|-.|-+. .+.. +.+.|..-++.+. ..+ .+.++.||+- .-..++++.|.+..
T Consensus 154 ~~vvAIGEiGLDy~~~~~~~~e~Q~~~F~~QL~LA~-e~~~~~~lPv~IH~R-~A~~d~l~iL~~~~~~~~~~~~~~~~~ 231 (401)
T 3e2v_A 154 TSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISC-LNDKLSSYPLFLHMR-SACDDFVQILERFVVGFTDEKDTFQLQ 231 (401)
T ss_dssp CSEEEEEEEEEETTCTTTSCHHHHHHHHHHHHHHTT-SSHHHHTSCEEEEEE-SCHHHHHHHHHHHHHCEECSSCTTCGG
T ss_pred CcEEEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHH-hhhccCCCeEEEEec-chHHHHHHHHHHhhccccccccccccc
Confidence 35777777666553 2222 2344555555443 230 0368899986 66777777775531
Q ss_pred ----------------CcEEEEEcCCCchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceE
Q 020229 260 ----------------ADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILW 323 (329)
Q Consensus 260 ----------------~d~~~lE~~~~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ 323 (329)
..++.-=|..+...+.+.+.- ..+-.+++|-+..+ + ++..++++.+|.++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~V~H~FsGs~e~a~~~l~l--G~~~yis~~g~~~k-----~-----~~~~e~v~~iPldrLL 299 (401)
T 3e2v_A 232 KLGASSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNL--SPNIFIGVNGCSLR-----T-----EENLAVVKQIPTERLL 299 (401)
T ss_dssp GC--CCTTCEECCCTTCCEEECSCCCCHHHHHHHHHH--CTTEEEEECGGGGS-----S-----HHHHHHHHTSCGGGEE
T ss_pred cccccccccccccCCCCcEEEEcCCCCHHHHHHHHhC--CCCEEEEeCCEecC-----C-----HHHHHHHHhCCchhEE
Confidence 122221122333444455542 11245666544222 2 2233788999999999
Q ss_pred eCCCC
Q 020229 324 VNPDL 328 (329)
Q Consensus 324 ispdC 328 (329)
+-+||
T Consensus 300 lETDa 304 (401)
T 3e2v_A 300 LETDA 304 (401)
T ss_dssp ECCCT
T ss_pred EecCC
Confidence 98886
No 160
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=42.66 E-value=44 Score=27.37 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 020229 15 RELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNT 61 (329)
Q Consensus 15 ~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~itdGe 61 (329)
.+|...|.++-.|.++.+|+.+.-++++..+..-=+-.|+|+|.--+
T Consensus 129 ~eL~~~R~qlls~~l~~dE~~~l~~~~~~~id~gn~~l~ldlvvR~~ 175 (184)
T 3a98_A 129 YDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDE 175 (184)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC-
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhcCCceEEECC
Confidence 37888888888899999999999999999998888899999985433
No 161
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=42.62 E-value=1.1e+02 Score=26.89 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHH--HhCCCcEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSI--IDMDADVIT 264 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l--~~~~~d~~~ 264 (329)
.+.++++.++||+.|.|-|..-. ..+..+..++..+.....+.+ +.++++|. =+|-. +...+ .+.+++.+.
T Consensus 153 ~~~~~~~~~~G~~~i~l~DT~G~--~~P~~v~~lv~~l~~~~~~~~-~~~l~~H~Hnd~Gla--~AN~laA~~aGa~~vd 227 (293)
T 3ewb_X 153 IEAVQTAIDAGATVINIPDTVGY--TNPTEFGQLFQDLRREIKQFD-DIIFASHCHDDLGMA--TANALAAIENGARRVE 227 (293)
T ss_dssp HHHHHHHHHTTCCEEEEECSSSC--CCHHHHHHHHHHHHHHCTTGG-GSEEEEECBCTTSCH--HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCC--CCHHHHHHHHHHHHHhcCCcc-CceEEEEeCCCcChH--HHHHHHHHHhCCCEEE
Confidence 33456677889999999887743 346666444444443332221 24455554 34533 33444 467888654
Q ss_pred EEc
Q 020229 265 IEN 267 (329)
Q Consensus 265 lE~ 267 (329)
-=.
T Consensus 228 ~sv 230 (293)
T 3ewb_X 228 GTI 230 (293)
T ss_dssp EBG
T ss_pred eec
Confidence 443
No 162
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=42.41 E-value=55 Score=29.02 Aligned_cols=63 Identities=6% Similarity=0.094 Sum_probs=37.9
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh-HHHHHHHHhCCCcEEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVITIE 266 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~-~~i~~~l~~~~~d~~~lE 266 (329)
++++..++|+++|++|- ++++.++..++.++... + .. .+-.- |+. .+-+..+.++++|+|++=
T Consensus 206 ea~eal~aGaD~I~LDn------~~~~~~~~~v~~l~~~~---~-~v--~ieaS-GGIt~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDN------FAVWQTQTAVQRRDSRA---P-TV--MLESS-GGLSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHGGGCCSEEEEET------CCHHHHHHHHHHHHHHC---T-TC--EEEEE-SSCCTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHHHHhhccC---C-Ce--EEEEE-CCCCHHHHHHHHhcCCCEEEEC
Confidence 55666678999999996 34555544444333221 1 12 23333 655 356788889999999854
No 163
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=41.92 E-value=1.2e+02 Score=25.53 Aligned_cols=21 Identities=14% Similarity=0.354 Sum_probs=17.3
Q ss_pred HHHHHHHHhcCCCceEeCCCC
Q 020229 308 DRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 308 ~ri~~a~~~v~~~~l~ispdC 328 (329)
+.++++++.+|.+|+.+.+|+
T Consensus 188 ~~l~~~~~~~~~drll~eTD~ 208 (264)
T 1xwy_A 188 LELRELLPLIPAEKLLIETDA 208 (264)
T ss_dssp HHHHHHGGGSCGGGEEECCCT
T ss_pred HHHHHHHHhCCHHHEEEecCC
Confidence 356778888899999999987
No 164
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=41.90 E-value=1.8e+02 Score=25.93 Aligned_cols=120 Identities=15% Similarity=0.153 Sum_probs=61.9
Q ss_pred HHHHHHCCCCeEEe--cC-CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccC-hHHHHHHHHhCCCcEEEEEc
Q 020229 192 ISELKAAGASWIQF--DE-PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSN-FNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 192 i~~l~~aG~~~IQi--DE-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn-~~~i~~~l~~~~~d~~~lE~ 267 (329)
++.+.+.|++.|.| .| |.+.. + .+.+.+.++.+.+..+ .. +|+..|. ..+.+..|.+.+++.+.+-.
T Consensus 100 ~~~~~~~G~~~i~l~gGe~p~~~~--~---~~~~~~l~~~ik~~~~--i~--i~~s~g~~~~e~l~~L~~aG~~~i~i~l 170 (350)
T 3t7v_A 100 CKTLKGAGFHMVDLTMGEDPYYYE--D---PNRFVELVQIVKEELG--LP--IMISPGLMDNATLLKAREKGANFLALYQ 170 (350)
T ss_dssp HHHHTTSCCSEEEEEECCCHHHHH--S---THHHHHHHHHHHHHHC--SC--EEEECSSCCHHHHHHHHHTTEEEEECCC
T ss_pred HHHHHHCCCCEEEEeeCCCCcccc--C---HHHHHHHHHHHHhhcC--ce--EEEeCCCCCHHHHHHHHHcCCCEEEEee
Confidence 44566789996554 34 54220 1 1223344444432221 22 3433343 34689999999999887532
Q ss_pred CCCc-------------hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEe
Q 020229 268 SRSD-------------EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWV 324 (329)
Q Consensus 268 ~~~~-------------~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~i 324 (329)
.... .+.++.+......|-.+..|++-.. .||++++.+.++.+. .++.+.+.+
T Consensus 171 Et~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl---get~e~~~~~l~~l~-~l~~~~v~~ 236 (350)
T 3t7v_A 171 ETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV---GNDIESTILSLRGMS-TNDPDMVRV 236 (350)
T ss_dssp BCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS---SCCHHHHHHHHHHHH-HTCCSEEEE
T ss_pred ecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec---CCCHHHHHHHHHHHH-hCCCCEEEe
Confidence 2211 1222222211112444555665443 599999988887764 456565554
No 165
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=41.71 E-value=1.9e+02 Score=25.86 Aligned_cols=55 Identities=11% Similarity=0.251 Sum_probs=39.9
Q ss_pred chhHHHHhhhcccCCCeeeeeeecCCC--CCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 271 DEKLLSVFREGVKYGAGIGPGVYDIHS--PRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~Gvvd~~~--~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
..+.++.+.+ .+..+++-.++... ....|++.+++.+..+.+.+|.++|.+.+|.
T Consensus 194 ~De~irala~---~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf 250 (325)
T 2i5g_A 194 SDEELKFIAD---HGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDF 250 (325)
T ss_dssp CHHHHHHHHH---TTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEECCCB
T ss_pred CHHHHHHHHH---cCCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEECCcC
Confidence 3466677764 35555555444321 2346899999999999999999999999984
No 166
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=41.53 E-value=50 Score=27.92 Aligned_cols=69 Identities=9% Similarity=0.103 Sum_probs=35.9
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++.+.++|++.|++-|+..........+ +.+..+. .. +.++.+--..-+. .-+..++++++|++.+-..
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~~~~~~----~~i~~i~-~~--~ipvi~~Ggi~~~-~~~~~~~~~Gad~V~lg~~ 104 (241)
T 1qo2_A 36 VEKLIEEGFTLIHVVDLSNAIENSGENL----PVLEKLS-EF--AEHIQIGGGIRSL-DYAEKLRKLGYRRQIVSSK 104 (241)
T ss_dssp HHHHHHTTCCCEEEEEHHHHHHCCCTTH----HHHHHGG-GG--GGGEEEESSCCSH-HHHHHHHHTTCCEEEECHH
T ss_pred HHHHHHcCCCEEEEecccccccCCchhH----HHHHHHH-hc--CCcEEEECCCCCH-HHHHHHHHCCCCEEEECch
Confidence 4456689999999988754311111111 1222222 22 2444332221122 2355667789999988654
No 167
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=41.41 E-value=38 Score=24.23 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=22.0
Q ss_pred HHHHHHHHHHh--CCCCCHHHHHHHHHH
Q 020229 15 RELKFALESFW--DGKSSAEDLQKVSAD 40 (329)
Q Consensus 15 ~eL~~a~~~~~--~g~is~~el~~~~~~ 40 (329)
.+|++|...|. .|.||.+||+.+...
T Consensus 9 ~~l~~~F~~fD~~dg~Is~~El~~~l~~ 36 (96)
T 1a4p_A 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEK 36 (96)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeECHHHHHHHHHH
Confidence 57888888887 588999999998865
No 168
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=41.17 E-value=1.3e+02 Score=25.07 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=12.1
Q ss_pred HHHHHHhcCCCceEeCCCC
Q 020229 310 INKMLAVLETNILWVNPDL 328 (329)
Q Consensus 310 i~~a~~~v~~~~l~ispdC 328 (329)
++++++.+|.+|+++.+|+
T Consensus 187 ~~~~i~~~~~dril~gSD~ 205 (265)
T 2gzx_A 187 PKEVAKHVSMERLLVETDA 205 (265)
T ss_dssp HHHHHHHSCTTTEEECCCT
T ss_pred HHHHHHhCChhhEEEccCC
Confidence 4556666666777766664
No 169
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=40.40 E-value=1.1e+02 Score=30.88 Aligned_cols=48 Identities=19% Similarity=0.246 Sum_probs=29.0
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM 243 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~ 243 (329)
+.++++.++||+.|.|=|..-. +.+..+..++.++... ++ +.++++|+
T Consensus 265 ~~a~~l~~~Ga~~I~l~DT~G~--~~P~~v~~lV~~lk~~---~p-~~~I~~H~ 312 (718)
T 3bg3_A 265 GLAEELVRAGTHILCIKDMAGL--LKPTACTMLVSSLRDR---FP-DLPLHIHT 312 (718)
T ss_dssp HHHHHHHHHTCSEEEEECTTSC--CCHHHHHHHHHHHHHH---ST-TCCEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCcCCC--cCHHHHHHHHHHHHHh---CC-CCeEEEEE
Confidence 3355667789999999887733 3455654444444433 33 35566665
No 170
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=39.74 E-value=45 Score=23.04 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=19.4
Q ss_pred cHHHHHHHHHHhCCC--CCHHHHHHH
Q 020229 14 KRELKFALESFWDGK--SSAEDLQKV 37 (329)
Q Consensus 14 ~~eL~~a~~~~~~g~--is~~el~~~ 37 (329)
..+|+.|.+.|..|+ |+.++|+..
T Consensus 9 ~eel~eAFr~f~dg~G~It~~eLr~~ 34 (75)
T 1h8b_A 9 AEQVIASFRILASDKPYILAEELRRE 34 (75)
T ss_dssp HHHHHHHHHHHTTSCSSBCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcCHHHHHhc
Confidence 378999999994444 999999984
No 171
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=39.64 E-value=2.1e+02 Score=25.59 Aligned_cols=92 Identities=12% Similarity=0.097 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCC--CCeEEec-CCccCCC-----C-ChHHH-HHHHHHHHHHHcCC--CCCceeEEee
Q 020229 176 SLLSLLPKILPIYKEVISELKAAG--ASWIQFD-EPLLVMD-----L-DSHKL-HAFIHSFRITNCGV--QDTTQIHTHM 243 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG--~~~IQiD-EP~l~~~-----~-~~~~~-~~~~~~~~~~~~~~--~~~~~i~lH~ 243 (329)
+..++.+++.+-.++.++.|.+.| +.++|+= |+..... . ..+.+ +.+..+++.+.+.- + ..++.+|.
T Consensus 101 ~~~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p-~~~v~ih~ 179 (332)
T 1hjs_A 101 DIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSP-KPKIMIHL 179 (332)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSS-CCEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCC-CCeEEEEe
Confidence 346677777777778888888877 4577764 6654221 1 12333 33445555565443 4 57889999
Q ss_pred ccc-Ch---HHHHHHHHhC------CCcEEEEEcC
Q 020229 244 CYS-NF---NDIIHSIIDM------DADVITIENS 268 (329)
Q Consensus 244 C~G-n~---~~i~~~l~~~------~~d~~~lE~~ 268 (329)
+.| +. ...++.+.+. .+|.|++-+.
T Consensus 180 ~~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syY 214 (332)
T 1hjs_A 180 DNGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFY 214 (332)
T ss_dssp SCTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECC
T ss_pred CCccchHHHHHHHHHHHhcCCCCCCCcCEEEEecC
Confidence 975 22 2234666543 6899999975
No 172
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=39.44 E-value=1.9e+02 Score=25.16 Aligned_cols=116 Identities=7% Similarity=0.060 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+.. .+...+ ++.++.--++.+. .....++++|+
T Consensus 20 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~---~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gada 93 (286)
T 2r91_A 20 LFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAA---TSAARR---VIVQVASLNADEAIALAKYAESRGAEA 93 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHH---HHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHH---HHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888999998776533211 124555554444433 333332 6788873345443 44446789999
Q ss_pred EEEEcC---C-Cc-hhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SD-EKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~-~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . .. ....+.+...- ..+..+++=+++.++...=++|.+++
T Consensus 94 vlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 94 VASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp EEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred EEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 987632 2 22 34444443200 11334555455544444445666544
No 173
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=39.21 E-value=1.5e+02 Score=24.96 Aligned_cols=85 Identities=8% Similarity=0.036 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEecCCccCCCCC-hHHHHHHHHHHHHHHcCC-CCCceeEEeec---------ccChHH
Q 020229 182 PKILPIYKEVISELKAAGASWIQFDEPLLVMDLD-SHKLHAFIHSFRITNCGV-QDTTQIHTHMC---------YSNFND 250 (329)
Q Consensus 182 ~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~i~lH~C---------~Gn~~~ 250 (329)
+...+.+++.++...+.||++|.+--. .....+ .+.++.+.+.++++.+-. +.++.+.+|.. ..+...
T Consensus 89 ~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~~~~~~~~ 167 (269)
T 3ngf_A 89 QEFRDNVDIALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGYFIVHQLE 167 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccchhcCHHH
Confidence 344455677788888899998887422 222222 234566677776666432 22478888852 123455
Q ss_pred HHHHHHhCCCcEEEEEc
Q 020229 251 IIHSIIDMDADVITIEN 267 (329)
Q Consensus 251 i~~~l~~~~~d~~~lE~ 267 (329)
+...+.+++-+.+.+-+
T Consensus 168 ~~~l~~~v~~~~vg~~~ 184 (269)
T 3ngf_A 168 AVGLVKRVNRPNVAVQL 184 (269)
T ss_dssp HHHHHHHHCCTTEEEEE
T ss_pred HHHHHHHhCCCCCCeEE
Confidence 66666666554444443
No 174
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=38.54 E-value=1.3e+02 Score=32.02 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=43.0
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEc
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~ 267 (329)
|.+.++++.++||+.|.|=|..-. +.+..+..++.++.... +++ ..+|.|.-+|....-.-.-.+.++|.+..=.
T Consensus 694 ~~~~a~~~~~~Ga~~i~l~Dt~G~--~~P~~~~~lv~~l~~~~-~~~--i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai 768 (1150)
T 3hbl_A 694 YVKLAKELEREGFHILAIKDMAGL--LKPKAAYELIGELKSAV-DLP--IHLHTHDTSGNGLLTYKQAIDAGVDIIDTAV 768 (1150)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTCC--CCHHHHHHHHHHHHHHC-CSC--EEEEECBTTSCHHHHHHHHHHTTCSEEEEBC
T ss_pred HHHHHHHHHHcCCCeeeEcCccCC--CCHHHHHHHHHHHHHhc-CCe--EEEEeCCCCcHHHHHHHHHHHhCCCEEEEec
Confidence 334456678899999999877633 34666655555554443 332 4555555566543222222467888755543
No 175
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=38.36 E-value=2.1e+02 Score=26.69 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecCCc-------cCC--CC-------Ch-HHH-HHHHHHHHHHHcCC----
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDEPL-------LVM--DL-------DS-HKL-HAFIHSFRITNCGV---- 233 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~-------l~~--~~-------~~-~~~-~~~~~~~~~~~~~~---- 233 (329)
+.++ ++.+.+.|.+..+...++|+|.|+|.--- |+. +. +. +.. +...++++.+.+.+
T Consensus 161 t~~e-I~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~ 239 (419)
T 3l5a_A 161 SHEK-INSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEA 239 (419)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhc
Confidence 4444 46788888888888899999999998431 111 10 11 211 22344444444433
Q ss_pred CCCceeEEeecc--------cC----hHHHHHHHHh-CCCcEEEEEc
Q 020229 234 QDTTQIHTHMCY--------SN----FNDIIHSIID-MDADVITIEN 267 (329)
Q Consensus 234 ~~~~~i~lH~C~--------Gn----~~~i~~~l~~-~~~d~~~lE~ 267 (329)
+.+.+|++-+.- |. +..++..|.+ .++|.|++=.
T Consensus 240 ~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~ 286 (419)
T 3l5a_A 240 PDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIAS 286 (419)
T ss_dssp CTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECC
T ss_pred CCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEee
Confidence 445778887763 21 2357888888 9999999853
No 176
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=37.82 E-value=1.3e+02 Score=25.53 Aligned_cols=84 Identities=7% Similarity=0.024 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHCCCCeEEecCCccCC-CCChHHHHHHHHHHHHHHcCC-CCCceeEEeecccCh----HHHHHHHHh
Q 020229 184 ILPIYKEVISELKAAGASWIQFDEPLLVM-DLDSHKLHAFIHSFRITNCGV-QDTTQIHTHMCYSNF----NDIIHSIID 257 (329)
Q Consensus 184 la~~~~~~i~~l~~aG~~~IQiDEP~l~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~i~lH~C~Gn~----~~i~~~l~~ 257 (329)
..+.+++.++...+.||++|.+--..... ..+.+..+.+.+.++.+.+-. +.++.+.+|.+.+++ ..+...+.+
T Consensus 82 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~ 161 (286)
T 3dx5_A 82 TIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGE 161 (286)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHh
Confidence 34456677777888999988874222111 123344556666666665422 124788899886543 445555555
Q ss_pred CCCc--EEEEEc
Q 020229 258 MDAD--VITIEN 267 (329)
Q Consensus 258 ~~~d--~~~lE~ 267 (329)
++-+ ++.+|.
T Consensus 162 ~~~~~vg~~~D~ 173 (286)
T 3dx5_A 162 VDHPNLKINLDF 173 (286)
T ss_dssp HCCTTEEEEEEH
T ss_pred cCCCCeEEEecc
Confidence 5433 455554
No 177
>2d16_A Hypothetical protein PH1918; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=37.79 E-value=23 Score=28.37 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=24.7
Q ss_pred CeeeeeeecCCCC-CCCCHHHHHHHHHHHHHhcC
Q 020229 286 AGIGPGVYDIHSP-RIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 286 ~~i~~Gvvd~~~~-~~e~~e~i~~ri~~a~~~v~ 318 (329)
..-++||||..++ -+|+.++++.| ++.++.+|
T Consensus 126 GrgvlGVvDG~~p~GVE~e~d~~~R-k~lLr~iG 158 (162)
T 2d16_A 126 GRAVIGVVDGKAANKIETDEQKKER-RELVEKIG 158 (162)
T ss_dssp CEEEEEEEESSCCCSCCCHHHHHHH-HHHHHHHT
T ss_pred CcEEEEEecCCCCCCccCHHHHHHH-HHHHHHhC
Confidence 4678999999877 59999999887 34555555
No 178
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=37.37 E-value=1.2e+02 Score=26.22 Aligned_cols=74 Identities=7% Similarity=0.130 Sum_probs=40.3
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHH-----H------HHHHHHHHHcCCCCCceeEEeecccC-----hHHHHHH
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLH-----A------FIHSFRITNCGVQDTTQIHTHMCYSN-----FNDIIHS 254 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~~i~lH~C~Gn-----~~~i~~~ 254 (329)
.+++|.++||++|.|-=|.--.-.+...++ + +...++.+.+ +....++++-+|+-- .+..+..
T Consensus 33 ~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~-~r~~~Pivlm~Y~N~i~~~G~e~F~~~ 111 (252)
T 3tha_A 33 FLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLAR-IKTKKALVFMVYYNLIFSYGLEKFVKK 111 (252)
T ss_dssp HHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHH-CCCSSEEEEECCHHHHHHHCHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHH-HhcCCCEEEEeccCHHHHhhHHHHHHH
Confidence 456788999999999977722111222221 1 1233444433 332368878777310 2344555
Q ss_pred HHhCCCcEEEE
Q 020229 255 IIDMDADVITI 265 (329)
Q Consensus 255 l~~~~~d~~~l 265 (329)
+.++++|++-+
T Consensus 112 ~~~aGvdG~Ii 122 (252)
T 3tha_A 112 AKSLGICALIV 122 (252)
T ss_dssp HHHTTEEEEEC
T ss_pred HHHcCCCEEEe
Confidence 56666666654
No 179
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=37.32 E-value=51 Score=27.75 Aligned_cols=90 Identities=4% Similarity=-0.079 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCCCC---ChHHHHHHHHHHHHHHcCCC-CCceeEEeeccc-ChHHHHH
Q 020229 179 SLLPKILPIYKEVISELKAAGASWIQFDEPLLVMDL---DSHKLHAFIHSFRITNCGVQ-DTTQIHTHMCYS-NFNDIIH 253 (329)
Q Consensus 179 ~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~C~G-n~~~i~~ 253 (329)
+..+...+.+++.++...+.|+++|.+--....... ..+.++.+.+.++.+.+... .++.+.+|.+.+ +...+..
T Consensus 69 ~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~ 148 (254)
T 3ayv_A 69 EVRGLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHEPHPEALRP 148 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCSSGGGTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCCCHHHHHH
Confidence 344555667778888889999999887633322221 12234556666666654221 146788888854 3344455
Q ss_pred HHHhCC-CcEEEEEcC
Q 020229 254 SIIDMD-ADVITIENS 268 (329)
Q Consensus 254 ~l~~~~-~d~~~lE~~ 268 (329)
.+.+++ -=++.+|..
T Consensus 149 l~~~v~~~vg~~~D~~ 164 (254)
T 3ayv_A 149 VLEAHAGELGFCFDAA 164 (254)
T ss_dssp HHHHHTTSSEEEEEHH
T ss_pred HHHhcCcCEEEEEEch
Confidence 554554 334566643
No 180
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=37.27 E-value=1.9e+02 Score=24.50 Aligned_cols=21 Identities=5% Similarity=0.216 Sum_probs=16.5
Q ss_pred HHHHHHHHhcCCCceEeCCCC
Q 020229 308 DRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 308 ~ri~~a~~~v~~~~l~ispdC 328 (329)
+.++++++.+|.+|+.+.+|+
T Consensus 195 ~~l~~~i~~~~~driL~eTD~ 215 (268)
T 1j6o_A 195 EALREVVKRVGLEYIVLETDC 215 (268)
T ss_dssp HHHHHHHHHHCGGGEEECCCB
T ss_pred HHHHHHHHhCChhhEEEecCC
Confidence 356677788888999988886
No 181
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=37.11 E-value=1.8e+02 Score=24.27 Aligned_cols=74 Identities=12% Similarity=0.043 Sum_probs=43.2
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHH--------------HHHHHHHHHHHcCCCCCceeEEeeccc-Ch-----
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKL--------------HAFIHSFRITNCGVQDTTQIHTHMCYS-NF----- 248 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~lH~C~G-n~----- 248 (329)
.+.++.+.++ +++|.++=|.-...++...+ ....+.+..+.+..+ .+ +|+.-+ |.
T Consensus 22 ~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~--~p--v~~~~~~~~~~~~~ 96 (248)
T 1geq_A 22 LNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS--TP--IVLMTYYNPIYRAG 96 (248)
T ss_dssp HHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC--CC--EEEEECHHHHHHHC
T ss_pred HHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC--CC--EEEEeccchhhhcC
Confidence 3445677778 99999996653323332211 112344555554432 34 444422 44
Q ss_pred -HHHHHHHHhCCCcEEEEEc
Q 020229 249 -NDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 249 -~~i~~~l~~~~~d~~~lE~ 267 (329)
...++.+.++++|++.+-.
T Consensus 97 ~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 97 VRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHHHCCCCEEEECC
Confidence 4677888899999999963
No 182
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=36.99 E-value=91 Score=28.01 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=40.0
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHH--HhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSI--IDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l--~~~~~d~~~l 265 (329)
+.++++.++||+.|.|-|..-. ..+..+..++..+.+...+++ +.++++|. =+|-. +...+ .+.+++.+.-
T Consensus 155 ~~~~~~~~~G~~~i~l~DT~G~--~~P~~v~~lv~~l~~~~~~~~-~~~i~~H~Hnd~GlA--~AN~laA~~aGa~~vd~ 229 (325)
T 3eeg_A 155 RMVEAVIEAGADVVNIPDTTGY--MLPWQYGERIKYLMDNVSNID-KAILSAHCHNDLGLA--TANSLAALQNGARQVEC 229 (325)
T ss_dssp HHHHHHHHHTCSEEECCBSSSC--CCHHHHHHHHHHHHHHCSCGG-GSEEEECBCCTTSCH--HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCCEEEecCccCC--cCHHHHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCHH--HHHHHHHHHhCCCEEEE
Confidence 3345667789999999887633 345666444444443332211 24566654 33433 34444 4567777654
Q ss_pred Ec
Q 020229 266 EN 267 (329)
Q Consensus 266 E~ 267 (329)
=.
T Consensus 230 tv 231 (325)
T 3eeg_A 230 TI 231 (325)
T ss_dssp BG
T ss_pred ec
Confidence 43
No 183
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=36.71 E-value=1.9e+02 Score=24.18 Aligned_cols=114 Identities=10% Similarity=0.072 Sum_probs=58.2
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeeccc-----ChHHHHHHHHhCCCcEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-----NFNDIIHSIIDMDADVI 263 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-----n~~~i~~~l~~~~~d~~ 263 (329)
.+.++.+.++|++.|++--..+..+.++..++.+.+.++.. ++ .+..+.++. .+...++....+++..+
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~--gl----~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAH--KV----TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHT--TC----EEEEEEEEEECSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHc--CC----eEEEEeccccCCHHHHHHHHHHHHHhCCCEE
Confidence 34455677889999998855333344555555444444322 33 333333321 12345555567788888
Q ss_pred EEEcCCCchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHHH
Q 020229 264 TIENSRSDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRIN 311 (329)
Q Consensus 264 ~lE~~~~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~ 311 (329)
.+.-. .+.++.+.+.. ..|-.+.+=..+.....+.+++++.+.++
T Consensus 107 ~~~p~---~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 107 VGVPN---YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp EEEEC---GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred EecCC---HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHH
Confidence 77532 22222322100 12444444444322345678887776654
No 184
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=36.25 E-value=96 Score=27.56 Aligned_cols=59 Identities=15% Similarity=0.372 Sum_probs=34.4
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh-HHHHHHHHhCCCcEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVITI 265 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~-~~i~~~l~~~~~d~~~l 265 (329)
+++...++|+++|++|- ++.+.++..++ .+++..++ - .-|+. ...+..+.++++|+|++
T Consensus 220 e~~eA~~aGaD~I~ld~------~~~e~l~~~v~-------~~~~~~~I--~-ASGGIt~~~i~~~a~~GvD~isv 279 (296)
T 1qap_A 220 ELDDALKAGADIIMLDN------FNTDQMREAVK-------RVNGQARL--E-VSGNVTAETLREFAETGVDFISV 279 (296)
T ss_dssp HHHHHHHTTCSEEEESS------CCHHHHHHHHH-------TTCTTCCE--E-ECCCSCHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHHH-------HhCCCCeE--E-EECCCCHHHHHHHHHcCCCEEEE
Confidence 45556678999999984 33444432222 12212222 2 22554 35677888899998876
No 185
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=36.14 E-value=73 Score=28.40 Aligned_cols=68 Identities=12% Similarity=0.122 Sum_probs=39.5
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHH--HhCCCcEEEEEc
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSI--IDMDADVITIEN 267 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l--~~~~~d~~~lE~ 267 (329)
++++.++|++.|.|-|..-. ..+..+..+ ++.+.+.++ +.++++|. -+|-.. ...+ .+.+++.+..=.
T Consensus 163 ~~~~~~~Ga~~i~l~DT~G~--~~P~~v~~l---v~~l~~~~~-~~~l~~H~Hnd~Gla~--AN~laAv~aGa~~vd~tv 234 (307)
T 1ydo_A 163 SEALFEFGISELSLGDTIGA--ANPAQVETV---LEALLARFP-ANQIALHFHDTRGTAL--ANMVTALQMGITVFDGSA 234 (307)
T ss_dssp HHHHHHHTCSCEEEECSSCC--CCHHHHHHH---HHHHHTTSC-GGGEEEECBGGGSCHH--HHHHHHHHHTCCEEEEBG
T ss_pred HHHHHhcCCCEEEEcCCCCC--cCHHHHHHH---HHHHHHhCC-CCeEEEEECCCCchHH--HHHHHHHHhCCCEEEEcc
Confidence 45566789999999887633 345555333 344445554 35677765 346432 3333 456777666543
No 186
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=36.10 E-value=37 Score=23.40 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHc
Q 020229 184 ILPIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNC 231 (329)
Q Consensus 184 la~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~ 231 (329)
|-.++.+.-++|..+|++.+||. ++... ++...++.+.+.++++
T Consensus 31 leralqelekalaragarnvqit---isaen-deqakelleliarllq 74 (96)
T 2jvf_A 31 LERALQELEKALARAGARNVQIT---ISAEN-DEQAKELLELIARLLQ 74 (96)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEE---EECSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccceEEE---EEecC-hHHHHHHHHHHHHHHH
Confidence 44567777788999999999996 23222 2333344455545444
No 187
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=35.98 E-value=1.5e+02 Score=27.23 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=39.5
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHH--HhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSI--IDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l--~~~~~d~~~l 265 (329)
+.++++.++||+.|.|-|..-. ..+..+..++..+.....+.+ ..++.+|+ =+|-. +...+ .+.+++.+..
T Consensus 161 ~~~~~~~~~Ga~~i~l~DT~G~--~~P~~~~~lv~~l~~~~~~~~-~~~l~~H~Hnd~GlA--vAN~laAv~aGa~~vd~ 235 (370)
T 3rmj_A 161 EICGAVIEAGATTINIPDTVGY--SIPYKTEEFFRELIAKTPNGG-KVVWSAHCHNDLGLA--VANSLAALKGGARQVEC 235 (370)
T ss_dssp HHHHHHHHHTCCEEEEECSSSC--CCHHHHHHHHHHHHHHSTTGG-GSEEEEECBCTTSCH--HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEecCccCC--cCHHHHHHHHHHHHHhCCCcC-ceEEEEEeCCCCChH--HHHHHHHHHhCCCEEEE
Confidence 3455677789999999887633 345565444444433332211 14555554 34433 34444 3567776554
Q ss_pred Ec
Q 020229 266 EN 267 (329)
Q Consensus 266 E~ 267 (329)
=.
T Consensus 236 tv 237 (370)
T 3rmj_A 236 TV 237 (370)
T ss_dssp BG
T ss_pred ec
Confidence 43
No 188
>1vgg_A Conserved hypothetical protein TT1634; thermus thermophilus HB8, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.75A {Thermus thermophilus} SCOP: d.256.1.1
Probab=35.67 E-value=21 Score=28.49 Aligned_cols=32 Identities=28% Similarity=0.279 Sum_probs=24.3
Q ss_pred CeeeeeeecCCCC-CCCCHHHHHHHHHHHHHhcC
Q 020229 286 AGIGPGVYDIHSP-RIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 286 ~~i~~Gvvd~~~~-~~e~~e~i~~ri~~a~~~v~ 318 (329)
..-++||||..++ -+|+.++++.|= +.++.+|
T Consensus 126 GrgvlGVvDG~~p~GVE~e~d~~~Rk-~lLr~iG 158 (161)
T 1vgg_A 126 QRAILGVMDGFTPLGVEDEAEVAWRK-DLLRRLG 158 (161)
T ss_dssp EEEEEEEEESCCCCEECCHHHHHHHH-HHHHHHT
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHH-HHHHHhC
Confidence 4678999999887 599999998873 4445444
No 189
>2ekm_A Hypothetical protein ST1511; NPPSFA, national project on protein ST and functional analyses, riken structural genomics/proteomi initiative; 2.06A {Sulfolobus tokodaii}
Probab=35.27 E-value=22 Score=28.46 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=24.7
Q ss_pred CeeeeeeecCCCC-CCCCHHHHHHHHHHHHHhcC
Q 020229 286 AGIGPGVYDIHSP-RIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 286 ~~i~~Gvvd~~~~-~~e~~e~i~~ri~~a~~~v~ 318 (329)
..-++||||..++ -+|+.++++.| ++.++.+|
T Consensus 127 GrgvlGVvDG~~p~GVE~e~d~~~R-k~lLr~iG 159 (162)
T 2ekm_A 127 GRGVIGVVDGYTPLGIETEADIKER-KELLRKFG 159 (162)
T ss_dssp CEEEEEEEESCCCCEECCHHHHHHH-HHHHHHTT
T ss_pred CcEEEEEecCCCCCCccCHHHHHHH-HHHHHHhC
Confidence 4678999999887 59999999887 44555555
No 190
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=35.11 E-value=1.8e+02 Score=24.79 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC--CCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecc-------cChH
Q 020229 180 LLPKILPIYKEVISELKAAGASWIQFDEPLLVM--DLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCY-------SNFN 249 (329)
Q Consensus 180 l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~-------Gn~~ 249 (329)
.-+...+.+++.++...+.||++|. =|.... ..+ .+.++.+.+.++++.+...+ +++.+|.+. .+..
T Consensus 107 ~r~~~~~~~~~~i~~A~~lG~~~v~--~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~-v~l~lEn~~~~~~~~~~~~~ 183 (290)
T 2zvr_A 107 IRKKAIERVVKHTEVAGMFGALVII--GLVRGRREGRSYEETEELFIESMKRLLELTEH-AKFVIEPLNRYETDFINTID 183 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEE--SGGGCCCTTSCHHHHHHHHHHHHHHHHHHCSS-CCEEECCCCTTTCSSCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEE--ecCCCCCCCcCHHHHHHHHHHHHHHHHHHhcc-CEEEEEeCCCcCccccCCHH
Confidence 3455566777888888889999887 221111 112 34457778888888876665 788888751 2334
Q ss_pred HHHHHHHhCCCc--EEEEEcC
Q 020229 250 DIIHSIIDMDAD--VITIENS 268 (329)
Q Consensus 250 ~i~~~l~~~~~d--~~~lE~~ 268 (329)
.+...+.+++-+ ++.+|..
T Consensus 184 ~~~~l~~~~~~~~vgl~~D~~ 204 (290)
T 2zvr_A 184 DALRILRKINSNRVGILADTF 204 (290)
T ss_dssp HHHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHHcCCCCEEEEEehh
Confidence 555555555433 4555643
No 191
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=35.02 E-value=45 Score=20.77 Aligned_cols=20 Identities=25% Similarity=0.435 Sum_probs=13.0
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHH
Q 020229 16 ELKFALESFWDGKSSAEDLQKVS 38 (329)
Q Consensus 16 eL~~a~~~~~~g~is~~el~~~~ 38 (329)
+|++|.+ +|+|+++|..++.
T Consensus 23 ~mR~AV~---~G~iTQ~E~D~I~ 42 (51)
T 2xf7_A 23 LLRVAVN---AGDLTQEEADKIM 42 (51)
T ss_dssp HHHHHHH---HTSSCHHHHHHHH
T ss_pred HHHHHHh---cCcccHHHHHHHH
Confidence 4555544 4888888877664
No 192
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=34.71 E-value=2.2e+02 Score=24.49 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCceeEEeec-ccC-hHHHHHHHHhCCCc--EEEEEcCC--Cch-hHHHHhhhcccCCCee
Q 020229 216 SHKLHAFIHSFRITNCGVQDTTQIHTHMC-YSN-FNDIIHSIIDMDAD--VITIENSR--SDE-KLLSVFREGVKYGAGI 288 (329)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~i~lH~C-~Gn-~~~i~~~l~~~~~d--~~~lE~~~--~~~-~~l~~l~~~~~~~~~i 288 (329)
..+.+.|...++.+.+ . +.++.+|+- +|. ..++++.|.+.+++ .+.+.... ... ...+.+. .|..+
T Consensus 147 ~~q~~~~~~~~~lA~~-~--~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~----~G~~i 219 (314)
T 2vc7_A 147 KDVEKVIRAAAIANKE-T--KVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIAD----KGSFI 219 (314)
T ss_dssp HHHHHHHHHHHHHHHH-H--CCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHH----TTCEE
T ss_pred HHHHHHHHHHHHHHHH-H--CCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHH----cCCEE
Confidence 3333444444444332 2 246788985 222 34667777766654 44454442 223 3333333 25555
Q ss_pred eeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 289 GPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 289 ~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
.++-... ....+.+...+.+.+.++.-+.+++.+++||
T Consensus 220 ~~~~~~~--~~~~~~~~~~~~i~~~~~~g~~drilleTD~ 257 (314)
T 2vc7_A 220 GLDRYGL--DLFLPVDKRNETTLRLIKDGYSDKIMISHDY 257 (314)
T ss_dssp EECCTTC--TTTSCHHHHHHHHHHHHHTTCTTTEEECCCC
T ss_pred EEeCCCc--ccCCCHHHHHHHHHHHHHcCCCCeEEEcCCc
Confidence 5542111 1123445666667776665456999999998
No 193
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=34.13 E-value=2.3e+02 Score=24.54 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=63.0
Q ss_pred HHHHHHHHC-CCCeEEecCCccCCCC---Ch--HHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCC---
Q 020229 190 EVISELKAA-GASWIQFDEPLLVMDL---DS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA--- 260 (329)
Q Consensus 190 ~~i~~l~~a-G~~~IQiDEP~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~--- 260 (329)
++++.+.+. +-+++-|-|-.|-+.. +. .+.+.|...++.+.+ . +.++.+|+= ....++++.|.+.+.
T Consensus 91 ~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~-~--~lPv~iH~r-~a~~~~~~il~~~~~~~~ 166 (301)
T 2xio_A 91 KELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQ-T--KLPMFLHCR-NSHAEFLDITKRNRDRCV 166 (301)
T ss_dssp HHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHH-H--CCCEEEEEE-SCHHHHHHHHHHTGGGSS
T ss_pred HHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHH-h--CCcEEEEec-CchHHHHHHHHhccCCCC
Confidence 445555443 2245666554443211 22 222445555555543 2 257899973 556678887776543
Q ss_pred cEEEEEcC-CCc-hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 261 DVITIENS-RSD-EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 261 d~~~lE~~-~~~-~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
.++ -.. +.. ....+.+. .|-.+.++-+ + ..+.+ .+++++.+|.+|+.+.+||
T Consensus 167 ~~i--~H~f~g~~~~~~~~l~----~g~yi~~~g~-~----~~~~~-----~~~~~~~~p~drlLleTD~ 220 (301)
T 2xio_A 167 GGV--VHSFDGTKEAAAALID----LDLYIGFNGC-S----LKTEA-----NLEVLKSIPSEKLMIETDA 220 (301)
T ss_dssp CEE--ETTCCCCHHHHHHHHH----TTCEEEECGG-G----SSSHH-----HHHHHHTSCGGGEEECCCT
T ss_pred cEE--EEccCCCHHHHHHHHh----cCcEEEEccc-c----cCChH-----HHHHHHhCChHHEEEecCC
Confidence 333 222 223 33344443 2555555432 1 12222 2378889999999999997
No 194
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=34.09 E-value=54 Score=24.53 Aligned_cols=26 Identities=8% Similarity=0.179 Sum_probs=21.4
Q ss_pred HHHHHHHHHHh--C--C-CCCHHHHHHHHHH
Q 020229 15 RELKFALESFW--D--G-KSSAEDLQKVSAD 40 (329)
Q Consensus 15 ~eL~~a~~~~~--~--g-~is~~el~~~~~~ 40 (329)
.+|++|...|. . | .|+.+||+.++..
T Consensus 22 ~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~ 52 (113)
T 2lnk_A 22 DVMVSTFHKYSGKEGDKFKLNKSELKELLTR 52 (113)
T ss_dssp HHHHHHHHHTTTTTSCTTCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHH
Confidence 57899999997 2 3 7999999999864
No 195
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=33.94 E-value=1.4e+02 Score=27.13 Aligned_cols=85 Identities=12% Similarity=0.187 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC-----CC--Ch----HHHHHHHHHHHHHHcCCCCCceeEEeeccc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM-----DL--DS----HKLHAFIHSFRITNCGVQDTTQIHTHMCYS 246 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~-----~~--~~----~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G 246 (329)
++.+.+.|+++.+. -|.++|.++|+||+-.... ++ ++ ..++.+.+. +.+ . +.+.++|...|
T Consensus 35 e~~i~~~ad~~~~~--gl~~~Gy~yv~iDdgW~~~rd~~G~~~~d~~rFP~G~k~lady---ih~-~--Glk~Giy~~~~ 106 (400)
T 4do4_A 35 EQLFMEMADRMAQD--GWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADY---VHS-L--GLKLGIYADMG 106 (400)
T ss_dssp HHHHHHHHHHHHHS--SHHHHTCCEEECCSSCEEEECTTCCEEECTTTSTTCHHHHHHH---HHH-T--TCEEEEEEEBS
T ss_pred HHHHHHHHHHHHHC--cchhhCCeEEEECCCcccCCCCCCCEeECcccCCcccHHHHHH---HHH-C--CceEEEecCCC
Confidence 56666666666552 3678899999999865321 11 11 224333333 221 2 36778887654
Q ss_pred Ch-------------HHHHHHHHhCCCcEEEEEcCCC
Q 020229 247 NF-------------NDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 247 n~-------------~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
.. ..-+..+.+-++|.+-+|+...
T Consensus 107 ~~~c~g~~~~~~~~~~~da~~~a~wGvdylK~D~~~~ 143 (400)
T 4do4_A 107 NFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFS 143 (400)
T ss_dssp SBCTTSCBCBCGGGHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CcccCCCCchhHhHHHHHHHHHHHhCCceEeeccCcC
Confidence 32 2346677889999999998753
No 196
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=33.74 E-value=2.1e+02 Score=23.87 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=63.8
Q ss_pred HHHHHHHHHCCCCeEEecCCc----------cCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccC-----hHHHHH
Q 020229 189 KEVISELKAAGASWIQFDEPL----------LVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSN-----FNDIIH 253 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn-----~~~i~~ 253 (329)
.+.++.+.++|++.|++--.. +....++...+++.+.++.. + ..+..|.++.+ +...++
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g----l~i~~~~~~~~~~~~~~~~~i~ 98 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASK--G----IKIVGTGVYVAEKSSDWEKMFK 98 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHT--T----CEEEEEEEECCSSTTHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHc--C----CeEEEEeccCCccHHHHHHHHH
Confidence 344566778999999997321 12234455554444443322 2 44455555443 235666
Q ss_pred HHHhCCCcEEEEEcCCCchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEeCCC
Q 020229 254 SIIDMDADVITIENSRSDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPD 327 (329)
Q Consensus 254 ~l~~~~~d~~~lE~~~~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ispd 327 (329)
....+++..+.+... .+.++.+.+.. ..|-.+.+=..+. .....+++++.+.++ . +..++.+.-|
T Consensus 99 ~A~~lGa~~v~~~~~---~~~~~~l~~~a~~~gv~l~~En~~~-~~~~~~~~~~~~ll~----~-~~~~~g~~~D 164 (262)
T 3p6l_A 99 FAKAMDLEFITCEPA---LSDWDLVEKLSKQYNIKISVHNHPQ-PSDYWKPENLLKAIS----G-RSQSLGSCSD 164 (262)
T ss_dssp HHHHTTCSEEEECCC---GGGHHHHHHHHHHHTCEEEEECCSS-SSSSSSHHHHHHHHT----T-SCTTEEEEEE
T ss_pred HHHHcCCCEEEecCC---HHHHHHHHHHHHHhCCEEEEEeCCC-ccccCCHHHHHHHHH----h-CCCceEEEec
Confidence 667789998888632 22333333210 1243444444432 123457877766554 1 3456665544
No 197
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=33.27 E-value=99 Score=26.97 Aligned_cols=71 Identities=13% Similarity=0.177 Sum_probs=45.3
Q ss_pred HHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccC----------hHHHHHHHHhCCCcEEE
Q 020229 195 LKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSN----------FNDIIHSIIDMDADVIT 264 (329)
Q Consensus 195 l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn----------~~~i~~~l~~~~~d~~~ 264 (329)
+.+.|+..|-|.||.+.. .-.+..|++....++...+....|.|.++... +..+-..|...++. |.
T Consensus 118 yl~~~~~~i~i~DPYir~---~hQ~~Nl~~f~E~~vk~~~~~~~i~L~T~~d~~~~~~~q~~~l~~ik~sl~~~gi~-~~ 193 (257)
T 2ymb_A 118 YLNETVTEVWIEDPYIRH---THQLYNFLRFCEMLIKRPCKVKTIHLLTSLDEGIEQVQQSRGLQEIEESLRSHGVL-LE 193 (257)
T ss_dssp TCSTTCCEEEEECSCCCS---HHHHHHHHHHHHHHTC--CCCCEEEEEECCCSSTTHHHHHHHHHHHHHHHHHHTCE-EE
T ss_pred HHhcCCeEEEEeCceecc---hHHHHHHHHHHHHHhhccCccceEEEEecCCCcccHHHHHHHHHHHHHHHHhCCCE-EE
Confidence 334588899999999774 45667788888877765443345666665431 12345555666775 88
Q ss_pred EEcCC
Q 020229 265 IENSR 269 (329)
Q Consensus 265 lE~~~ 269 (329)
++|+.
T Consensus 194 ~~~~~ 198 (257)
T 2ymb_A 194 VQYSS 198 (257)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 88864
No 198
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=32.91 E-value=2.1e+02 Score=24.35 Aligned_cols=88 Identities=9% Similarity=0.050 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEecCCccC-CCC-ChHHHHHHHHHHHHHHcCCC-CCceeEEeecccC----hHHHH
Q 020229 180 LLPKILPIYKEVISELKAAGASWIQFDEPLLV-MDL-DSHKLHAFIHSFRITNCGVQ-DTTQIHTHMCYSN----FNDII 252 (329)
Q Consensus 180 l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~C~Gn----~~~i~ 252 (329)
..+...+.+++.++...+.||++|.+- +.-. ... ..+..+.+.+.++.+.+-.. .++++.+|...++ ...+.
T Consensus 102 ~r~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~ 180 (295)
T 3cqj_A 102 VRAQGLEIMRKAIQFAQDVGIRVIQLA-GYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKAL 180 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEC-CCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEC-CCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCHHHHH
Confidence 344556677788888889999988874 2111 111 23445666666666554221 1467888887542 34455
Q ss_pred HHHHhCCCcEEEEEcC
Q 020229 253 HSIIDMDADVITIENS 268 (329)
Q Consensus 253 ~~l~~~~~d~~~lE~~ 268 (329)
..+.+++-+.+.+-++
T Consensus 181 ~l~~~v~~~~vg~~~D 196 (295)
T 3cqj_A 181 GYAHYLNNPWFQLYPD 196 (295)
T ss_dssp HHHHHHCCTTEEEECB
T ss_pred HHHHhcCCCCeEEEec
Confidence 5555555444555443
No 199
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=32.73 E-value=2.7e+02 Score=24.91 Aligned_cols=123 Identities=12% Similarity=0.152 Sum_probs=61.9
Q ss_pred HHHHHHHHHCCCCeEEec----CCccCC--CCC-hHHHHHHHHHHHHHHcCCCCCceeEEee--cccChHHHHHHHHhCC
Q 020229 189 KEVISELKAAGASWIQFD----EPLLVM--DLD-SHKLHAFIHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDMD 259 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiD----EP~l~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~--C~Gn~~~i~~~l~~~~ 259 (329)
.+.+++|.++|++.|.+= =|.-+. ... ....+ .++.+.+.++ +.++.+.+ ++|+. +-++...+++
T Consensus 33 ~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e----~l~~i~~~~~-~~~i~~l~~p~~~~~-~~i~~a~~aG 106 (345)
T 1nvm_A 33 RAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLE----YIEAVAGEIS-HAQIATLLLPGIGSV-HDLKNAYQAG 106 (345)
T ss_dssp HHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHH----HHHHHHTTCS-SSEEEEEECBTTBCH-HHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHH----HHHHHHhhCC-CCEEEEEecCCcccH-HHHHHHHhCC
Confidence 344566778999999993 232111 111 11222 2334444444 45655543 33443 3466667788
Q ss_pred CcEEEEEcCCCc-h---hHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceEe
Q 020229 260 ADVITIENSRSD-E---KLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWV 324 (329)
Q Consensus 260 ~d~~~lE~~~~~-~---~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~i 324 (329)
+|.+.+-...+. . +..+..++ .+..+...+-++. .-++|.+.+.++++.++ |...+.+
T Consensus 107 vd~v~I~~~~s~~~~~~~~i~~ak~---~G~~v~~~~~~a~---~~~~e~~~~ia~~~~~~-Ga~~i~l 168 (345)
T 1nvm_A 107 ARVVRVATHCTEADVSKQHIEYARN---LGMDTVGFLMMSH---MIPAEKLAEQGKLMESY-GATCIYM 168 (345)
T ss_dssp CCEEEEEEETTCGGGGHHHHHHHHH---HTCEEEEEEESTT---SSCHHHHHHHHHHHHHH-TCSEEEE
T ss_pred cCEEEEEEeccHHHHHHHHHHHHHH---CCCEEEEEEEeCC---CCCHHHHHHHHHHHHHC-CCCEEEE
Confidence 888887644321 2 22333332 2555665554442 23456665555555444 4444444
No 200
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=32.52 E-value=2.3e+02 Score=26.67 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=48.6
Q ss_pred HHHHHCCCCeEEecCCccCCCCCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcEEEEEc
Q 020229 193 SELKAAGASWIQFDEPLLVMDLDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADVITIEN 267 (329)
Q Consensus 193 ~~l~~aG~~~IQiDEP~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~~~lE~ 267 (329)
.++..-|+|+|-=||+...-...+ +-+..+.++++++.+.-.+...-.+.+. |.... ..+...+++.+++-++.
T Consensus 184 ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-~~~~em~~Ra~~a~e~G~~~~mvd~ 262 (432)
T 3nwr_A 184 RELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNIT-DDLDAMRRHAELVEREGGSCVMASI 262 (432)
T ss_dssp HHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred HHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecC-CCHHHHHHHHHHHHHcCCCEEEEec
Confidence 345667999999999886543333 3345567777777653221122345555 77664 46777889999999986
Q ss_pred C
Q 020229 268 S 268 (329)
Q Consensus 268 ~ 268 (329)
.
T Consensus 263 ~ 263 (432)
T 3nwr_A 263 N 263 (432)
T ss_dssp H
T ss_pred c
Confidence 4
No 201
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=32.45 E-value=1.8e+02 Score=26.31 Aligned_cols=84 Identities=7% Similarity=0.132 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC------CC--ChH----HHHHHHHHHHHHHcCCCCCceeEEeecc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM------DL--DSH----KLHAFIHSFRITNCGVQDTTQIHTHMCY 245 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~------~~--~~~----~~~~~~~~~~~~~~~~~~~~~i~lH~C~ 245 (329)
++.+...++.+.+ ..|.++|+++|.||+-.... ++ +++ .++.+.+ .+.+ . ++++++|...
T Consensus 25 e~~i~~~ad~~~~--~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~---~ih~-~--Glk~Giw~~~ 96 (362)
T 1uas_A 25 EQIIRETADALVN--TGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALAD---YVHA-K--GLKLGIYSDA 96 (362)
T ss_dssp HHHHHHHHHHHHH--TSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHH---HHHH-T--TCEEEEEEES
T ss_pred HHHHHHHHHHHHH--cCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHH---HHHH-C--CCEeEEEeeC
Confidence 3444555554433 23578999999999865441 11 111 2433333 3332 1 3677888765
Q ss_pred cC-------------hHHHHHHHHhCCCcEEEEEcCC
Q 020229 246 SN-------------FNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 246 Gn-------------~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
|. .+..+..+.+.+||.+=+|+..
T Consensus 97 ~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~ 133 (362)
T 1uas_A 97 GSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCN 133 (362)
T ss_dssp SSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCC
T ss_pred CCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccC
Confidence 42 2457788889999999999874
No 202
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=32.42 E-value=1.7e+02 Score=26.91 Aligned_cols=90 Identities=10% Similarity=0.069 Sum_probs=53.7
Q ss_pred CHHHHHH-HHHHHHHHHHHHHH-HCCCCeEEecC-----------CccC---CC-C---ChH-HHHHHHHHHHHHHcCCC
Q 020229 176 SLLSLLP-KILPIYKEVISELK-AAGASWIQFDE-----------PLLV---MD-L---DSH-KLHAFIHSFRITNCGVQ 234 (329)
Q Consensus 176 ~~~~l~~-~la~~~~~~i~~l~-~aG~~~IQiDE-----------P~l~---~~-~---~~~-~~~~~~~~~~~~~~~~~ 234 (329)
+.++. . .+.+.+.+.++... ++|++.|+|.- |... .| . +.+ ..+...+.+..+.+.+.
T Consensus 164 t~~eI-~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg 242 (379)
T 3aty_A 164 TDDEV-RDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVG 242 (379)
T ss_dssp CHHHH-HHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHH-hHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcC
Confidence 44554 4 67778888888888 99999999974 2210 11 0 211 12334455555555444
Q ss_pred CCceeEEeecc---------cC----hHHHHHHHHhCCCcEEEEEc
Q 020229 235 DTTQIHTHMCY---------SN----FNDIIHSIIDMDADVITIEN 267 (329)
Q Consensus 235 ~~~~i~lH~C~---------Gn----~~~i~~~l~~~~~d~~~lE~ 267 (329)
.+ +|++-+.- |+ +..++..|.+.++|.|++-.
T Consensus 243 ~~-~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 287 (379)
T 3aty_A 243 SD-RVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLR 287 (379)
T ss_dssp GG-GEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred CC-eEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 33 46664432 11 22567778889999998865
No 203
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=32.37 E-value=77 Score=22.70 Aligned_cols=49 Identities=12% Similarity=0.025 Sum_probs=33.1
Q ss_pred HHHHHHHHHHh---CCCCCHHHHHHHHH------HHHHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW---DGKSSAEDLQKVSA------DLRSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~---~g~is~~el~~~~~------~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+++++...+. .|.|+.+||+++.. +.+.++|+. +|.=.||.+.+..|+
T Consensus 11 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~-----~D~d~dG~i~~~EF~ 68 (99)
T 1qjt_A 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDL-----ADTDGKGVLSKQEFF 68 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHH-----HCCSSSSSCCSHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHH-----HCCCCCCcCCHHHHH
Confidence 67888888886 47799999998874 334444432 233357888776654
No 204
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=32.22 E-value=2e+02 Score=23.19 Aligned_cols=69 Identities=13% Similarity=0.158 Sum_probs=44.6
Q ss_pred HCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh----------HHHHHHHHhCCCcEEEEE
Q 020229 197 AAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF----------NDIIHSIIDMDADVITIE 266 (329)
Q Consensus 197 ~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~----------~~i~~~l~~~~~d~~~lE 266 (329)
+-++..|-|.||.+.. .-.+..|++..+.+++..+....|.|.++.-.. ..+-..|...++. |.++
T Consensus 32 ~~~~~~I~IeDPYIR~---~hQi~NfvrF~Ellvk~~~~~~~I~L~T~~d~~~~~~~Q~~~L~~ik~sL~~~gI~-l~~~ 107 (163)
T 4a5z_A 32 NETVTEVWIEDPYIRH---THQLYNFLRFCEMLIKRPCKVKTIHLLTSLDEGIEQVQQSRGLQEIEESLRSHGVL-LEVQ 107 (163)
T ss_dssp CTTCCEEEEECSCCCS---HHHHHHHHHHHHHHHC--CCCCEEEEEECCCCSTTHHHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred hCCceEEEEECCcccc---HHHHHHHHHHHHHHHhcCCCccEEEEEeCCccccCHHHHHHHHHHHHHHHHHCCCE-EEEE
Confidence 4468899999999774 456777888888887653333457777775322 2355555556665 7777
Q ss_pred cCC
Q 020229 267 NSR 269 (329)
Q Consensus 267 ~~~ 269 (329)
|+.
T Consensus 108 fs~ 110 (163)
T 4a5z_A 108 YSS 110 (163)
T ss_dssp ECT
T ss_pred eCC
Confidence 764
No 205
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=31.99 E-value=1.5e+02 Score=25.74 Aligned_cols=73 Identities=14% Similarity=0.175 Sum_probs=41.7
Q ss_pred HHHHHHHHHH-CCCCeEEec--CCccC-----CCCChHHHHHHHHHHHHHHcCCCCCceeEEeeccc--ChHHHHHHHHh
Q 020229 188 YKEVISELKA-AGASWIQFD--EPLLV-----MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYS--NFNDIIHSIID 257 (329)
Q Consensus 188 ~~~~i~~l~~-aG~~~IQiD--EP~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G--n~~~i~~~l~~ 257 (329)
+.+.++.+.+ +|++.|.|+ .|... +..+... +.+.++.+.+.+ +.++.+.+..+ +...++..+.+
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~---~~eii~~v~~~~--~~pv~vk~~~~~~~~~~~a~~l~~ 187 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEV---AAALVKACKAVS--KVPLYVKLSPNVTDIVPIAKAVEA 187 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHH---HHHHHHHHHHHC--SSCEEEEECSCSSCSHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHH---HHHHHHHHHHhc--CCCEEEEECCChHHHHHHHHHHHH
Confidence 3344455666 899998886 23210 0011222 233334443333 25677776533 44567888899
Q ss_pred CCCcEEEE
Q 020229 258 MDADVITI 265 (329)
Q Consensus 258 ~~~d~~~l 265 (329)
.++|++.+
T Consensus 188 ~G~d~i~v 195 (311)
T 1ep3_A 188 AGADGLTM 195 (311)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 99999998
No 206
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=31.84 E-value=1.9e+02 Score=30.90 Aligned_cols=72 Identities=19% Similarity=0.314 Sum_probs=39.1
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHH--HhCCCcEEEE
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSI--IDMDADVITI 265 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l--~~~~~d~~~l 265 (329)
+.+.++++.++||+.|.|=|..-. +.+..+..++.++.... +++ ..+|.|.=+|... ...| .+.+++.+..
T Consensus 711 ~~~~~~~~~~~Ga~~i~l~DT~G~--~~P~~~~~lv~~l~~~~-~~~--i~~H~Hnd~GlAv--An~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 711 YTNLAVELEKAGAHIIAVKDMAGL--LKPAAAKVLFKALREAT-GLP--IHFHTHDTSGIAA--ATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTCC--CCHHHHHHHHHHHHHHC-SSC--EEEEECBTTSCHH--HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCccCC--cCHHHHHHHHHHHHHhc-CCe--EEEEECCCCCHHH--HHHHHHHHhCCCEEEe
Confidence 334456677899999999887633 34566555555544433 232 3444444455432 2333 3456665544
Q ss_pred E
Q 020229 266 E 266 (329)
Q Consensus 266 E 266 (329)
=
T Consensus 784 t 784 (1165)
T 2qf7_A 784 A 784 (1165)
T ss_dssp B
T ss_pred c
Confidence 3
No 207
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=31.71 E-value=1.9e+02 Score=26.62 Aligned_cols=84 Identities=12% Similarity=0.130 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC------CC--ChH----HHHHHHHHHHHHHcCCCCCceeEEeecc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM------DL--DSH----KLHAFIHSFRITNCGVQDTTQIHTHMCY 245 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~------~~--~~~----~~~~~~~~~~~~~~~~~~~~~i~lH~C~ 245 (329)
++.+...++.+.+ ..|.++|+++|.||+-.... ++ +++ .++.+.+. +.+ . +++++||+..
T Consensus 25 e~~i~~~ad~~~~--~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~---i~~-~--Glk~Giw~~p 96 (397)
T 3a5v_A 25 EQLILDAAKAIAS--SGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDD---IHN-L--GLKAGIYSSA 96 (397)
T ss_dssp HHHHHHHHHHHHH--HTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHH---HHH-T--TCEEEEEEES
T ss_pred HHHHHHHHHHHHH--cCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHH---HHH-c--CCEEEEEecC
Confidence 3444555555444 24667899999999866541 11 112 23333333 322 2 3678888876
Q ss_pred cC-----------h-HHHHHHHHhCCCcEEEEEcCC
Q 020229 246 SN-----------F-NDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 246 Gn-----------~-~~i~~~l~~~~~d~~~lE~~~ 269 (329)
|. + ...+..+.+.+||.|-+|+.+
T Consensus 97 g~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~ 132 (397)
T 3a5v_A 97 GTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDNCY 132 (397)
T ss_dssp SSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 64 2 246777888999999999875
No 208
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=31.11 E-value=2.7e+02 Score=24.33 Aligned_cols=116 Identities=12% Similarity=0.025 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHH---HHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~---~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++. .+.++.+.+...+ ++.++.--++.+.+ ....++++|+
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr---~~v~~~~~~~~~g---viaGvg~~~t~~ai~la~~A~~~Gada 94 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEK---LENLKAVYDVTNK---IIFQVGGLNLDDAIRLAKLSKDFDIVG 94 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHH---HHHHHHHHTTCSC---EEEECCCSCHHHHHHHHHHGGGSCCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHH---HHHHHHHHHHcCC---EEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888899997776533211 12445554 3344445555542 77888833455443 3445689999
Q ss_pred EEEEcC---C-Cc-hhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SD-EKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~-~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . .. ..+.+.+...- ..+..+++=+++.++...=++|.+++
T Consensus 95 vlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 95 IASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp EEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 987632 2 22 34444444210 11334555555544444446666654
No 209
>1wvq_A Hypothetical protein PAE2307; phosphorylated histidine, structural genomics, unknown funct; HET: NEP; 1.45A {Pyrobaculum aerophilum} PDB: 2gl0_A* 2jb7_A*
Probab=30.45 E-value=48 Score=26.65 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=23.6
Q ss_pred CeeeeeeecCCCC-CCCCHHHHHHHHHHHHHhc
Q 020229 286 AGIGPGVYDIHSP-RIPSTEEIADRINKMLAVL 317 (329)
Q Consensus 286 ~~i~~Gvvd~~~~-~~e~~e~i~~ri~~a~~~v 317 (329)
..-++||||..++ -+|+.++++.|=+ .++.+
T Consensus 131 GrgvlGVvDG~~P~GVE~e~d~~~Rk~-lLr~i 162 (167)
T 1wvq_A 131 RRGVVGVVDGHSPLGVETEKDREERKK-FLREV 162 (167)
T ss_dssp EEEEEEEEESCCCCEECCHHHHHHHHH-HHHHT
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHH-HHHhc
Confidence 4578999999887 5999999988844 44433
No 210
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=30.42 E-value=2.7e+02 Score=24.20 Aligned_cols=74 Identities=14% Similarity=0.067 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++. .+.++.+.+...+ ++.++.--++.+ ......++++|+
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr---~~v~~~~~~~~~g---ViaGvg~~~t~~ai~la~~A~~~Gada 94 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEK---RQNLNALYDVTHK---LIFQVGSLNLNDVMELVKFSNEMDILG 94 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHH---HHHHHHHTTTCSC---EEEECCCSCHHHHHHHHHHHHTSCCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHH---HHHHHHHHHHhCC---eEEeeCCCCHHHHHHHHHHHHhcCCCE
Confidence 4566677888899998776533211 12444554 3444445555542 777887334444 344456789999
Q ss_pred EEEE
Q 020229 263 ITIE 266 (329)
Q Consensus 263 ~~lE 266 (329)
+.+=
T Consensus 95 vlv~ 98 (288)
T 2nuw_A 95 VSSH 98 (288)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9875
No 211
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=30.39 E-value=2.7e+02 Score=24.20 Aligned_cols=75 Identities=7% Similarity=0.054 Sum_probs=43.1
Q ss_pred HHHHHHHHHHCCCC-eEEec--CCccCCCCC-hHHHHHHHHHHHHHHcCCCCCceeEEeecccCh-----HHHHHHHHhC
Q 020229 188 YKEVISELKAAGAS-WIQFD--EPLLVMDLD-SHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF-----NDIIHSIIDM 258 (329)
Q Consensus 188 ~~~~i~~l~~aG~~-~IQiD--EP~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~-----~~i~~~l~~~ 258 (329)
+.+.++.+.++|++ +|.|. .|....... ....+...+.+..+.+.. +.++.+-+. .++ ..++..+.+.
T Consensus 108 ~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~-~~~~~~~~~~~a~~~~~~ 184 (311)
T 1jub_A 108 NIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLP-PYFDLVHFDIMAEILNQF 184 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEEC-CCCSHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEEC-CCCCHHHHHHHHHHHHHc
Confidence 44445667789999 88886 344311100 112233345555555544 357777766 433 2346777888
Q ss_pred CCcEEEE
Q 020229 259 DADVITI 265 (329)
Q Consensus 259 ~~d~~~l 265 (329)
++|++.+
T Consensus 185 G~d~i~v 191 (311)
T 1jub_A 185 PLTYVNS 191 (311)
T ss_dssp CCCEEEE
T ss_pred CCcEEEe
Confidence 9999865
No 212
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=30.34 E-value=2.5e+02 Score=23.80 Aligned_cols=69 Identities=13% Similarity=0.239 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHCCCCeEEecCCccCCC--CChHHHHHHHHHHHHHHcCCCCCceeEEeeccc-----ChHHHHHHHHhC
Q 020229 186 PIYKEVISELKAAGASWIQFDEPLLVMD--LDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYS-----NFNDIIHSIIDM 258 (329)
Q Consensus 186 ~~~~~~i~~l~~aG~~~IQiDEP~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~G-----n~~~i~~~l~~~ 258 (329)
+++.+.++.+.++|++-|-|= .|..+ ++.+..+.++++ .. ++++..|-.|- |....++.|.++
T Consensus 76 ~~M~~Di~~~~~~GadGvV~G--~Lt~dg~iD~~~~~~Li~~----a~----~~~vTFHRAFD~~~~~d~~~ale~L~~l 145 (224)
T 2bdq_A 76 RIMEEDILRAVELESDALVLG--ILTSNNHIDTEAIEQLLPA----TQ----GLPLVFHMAFDVIPKSDQKKSIDQLVAL 145 (224)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC--CBCTTSSBCHHHHHHHHHH----HT----TCCEEECGGGGGSCTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEe--eECCCCCcCHHHHHHHHHH----hC----CCeEEEECchhccCCcCHHHHHHHHHHc
Confidence 467778889999999866554 23322 222333322222 22 35678899873 445678889999
Q ss_pred CCcEEE
Q 020229 259 DADVIT 264 (329)
Q Consensus 259 ~~d~~~ 264 (329)
+++.+-
T Consensus 146 Gv~rIL 151 (224)
T 2bdq_A 146 GFTRIL 151 (224)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 998876
No 213
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=29.99 E-value=2.4e+02 Score=23.36 Aligned_cols=27 Identities=7% Similarity=0.160 Sum_probs=18.9
Q ss_pred eecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 242 HMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 242 H~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
|+.-+++.+-++.+.+.++|.+.+...
T Consensus 84 ~~~i~~~~~~i~~~~~~Gad~V~l~~~ 110 (234)
T 1yxy_A 84 EPFITATMTEVDQLAALNIAVIAMDCT 110 (234)
T ss_dssp CCCBSCSHHHHHHHHTTTCSEEEEECC
T ss_pred ccccCChHHHHHHHHHcCCCEEEEccc
Confidence 444344545677788899999988765
No 214
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=29.98 E-value=2.5e+02 Score=23.71 Aligned_cols=87 Identities=9% Similarity=0.010 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEecCC-----c-cCC------CC-ChHHHHHHHHHHHHHHcCCC-CCceeEEeecccC
Q 020229 182 PKILPIYKEVISELKAAGASWIQFDEP-----L-LVM------DL-DSHKLHAFIHSFRITNCGVQ-DTTQIHTHMCYSN 247 (329)
Q Consensus 182 ~~la~~~~~~i~~l~~aG~~~IQiDEP-----~-l~~------~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~C~Gn 247 (329)
+...+.+++.++...+.||++|.+-.+ . ... .. ..+.++.+.+.++.+.+... .++++.+|.+.++
T Consensus 86 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~ 165 (301)
T 3cny_A 86 EKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGT 165 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCc
Confidence 445566777788888999998877531 0 000 11 33445666666666654221 2478889887553
Q ss_pred ----hHHHHHHHHhCCCc--EEEEEcC
Q 020229 248 ----FNDIIHSIIDMDAD--VITIENS 268 (329)
Q Consensus 248 ----~~~i~~~l~~~~~d--~~~lE~~ 268 (329)
...+...+.+++-+ ++.+|..
T Consensus 166 ~~~~~~~~~~l~~~~~~~~vg~~~D~~ 192 (301)
T 3cny_A 166 GIQTKEETDRLMANTDPKLVGLLYDTG 192 (301)
T ss_dssp SSCSHHHHHHHHHTSCTTTCEEEEEHH
T ss_pred ccCCHHHHHHHHHhCCccceeEEechH
Confidence 34455555556543 5666643
No 215
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=29.94 E-value=2e+02 Score=26.29 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=41.8
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
.+.++.+.++|+++|.||-.. ..+.. ..+.++.+.+..+ +.+++...| .+.+ .+..+.++++|.+.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~---G~~~~----~~~~I~~ik~~~p-~v~Vi~G~v-~t~e-~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSH---GHSEG----VLQRIRETRAAYP-HLEIIGGNV-ATAE-GARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSC---TTSHH----HHHHHHHHHHHCT-TCEEEEEEE-CSHH-HHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCC---CCCHH----HHHHHHHHHHhcC-CCceEeeee-CCHH-HHHHHHHcCCCEEEE
Confidence 455677889999999998321 11222 2333444444444 356666666 4443 466678899999998
No 216
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=29.39 E-value=2e+02 Score=24.05 Aligned_cols=70 Identities=10% Similarity=0.097 Sum_probs=38.0
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++.+.++|++.|++-++..... .. ....+.+.++.+... .++.+.-..-+. +-+..++++++|++.+-..
T Consensus 37 a~~~~~~Gad~i~v~d~~~~~~-~~---~~~~~~i~~i~~~~~--iPvi~~Ggi~~~-~~~~~~~~~Gad~V~lg~~ 106 (252)
T 1ka9_F 37 ARAYDEAGADELVFLDISATHE-ER---AILLDVVARVAERVF--IPLTVGGGVRSL-EDARKLLLSGADKVSVNSA 106 (252)
T ss_dssp HHHHHHHTCSCEEEEECCSSTT-CH---HHHHHHHHHHHTTCC--SCEEEESSCCSH-HHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEEcCCcccc-Cc---cccHHHHHHHHHhCC--CCEEEECCcCCH-HHHHHHHHcCCCEEEEChH
Confidence 4456778999999987753321 11 112233445554432 555443332222 3455666678888887643
No 217
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=29.33 E-value=1.3e+02 Score=29.40 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC------CC--ChH----HHHHHHHHHHHHHcCCCCCceeEEeecc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM------DL--DSH----KLHAFIHSFRITNCGVQDTTQIHTHMCY 245 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~------~~--~~~----~~~~~~~~~~~~~~~~~~~~~i~lH~C~ 245 (329)
++.+...++.+.+ ..|.++|.++|.||+-.... ++ +++ .++.+.+. +.+ . +++++||...
T Consensus 28 ~~~~~~~ad~~~~--~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~fP~gl~~l~~~---i~~-~--Glk~gi~~~~ 99 (614)
T 3a21_A 28 YSVIKKQVDAFVA--AGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPGGMSAITAY---IHS-K--GLKAGIYTDA 99 (614)
T ss_dssp HHHHHHHHHHHHH--TTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTTSTTCHHHHHHH---HHH-T--TCEEEEEEES
T ss_pred HHHHHHHHHHHHH--cCHHhhCCEEEEECCCcCCCCcCCCCCEEECccccCCcHHHHHHH---HHH-C--CCeeEEEecC
Confidence 3444555554433 34678899999999866431 11 112 23333333 332 2 3677888865
Q ss_pred cC----------------------hHHHHHHHHhCCCcEEEEEcC
Q 020229 246 SN----------------------FNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 246 Gn----------------------~~~i~~~l~~~~~d~~~lE~~ 268 (329)
|. +...+..+.+-+||.+-+|+.
T Consensus 100 ~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~ 144 (614)
T 3a21_A 100 GKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWC 144 (614)
T ss_dssp SSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECH
T ss_pred CCccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEeccc
Confidence 54 445677788899999999985
No 218
>1rlh_A Conserved hypothetical protein; structural genomics, T. acidophilum, PSI, protein structure initiative; 1.80A {Thermoplasma acidophilum} SCOP: d.256.1.1
Probab=29.23 E-value=24 Score=28.45 Aligned_cols=32 Identities=28% Similarity=0.290 Sum_probs=14.3
Q ss_pred CeeeeeeecCCCC-CCCCHHHHHHHHHHHHHhcC
Q 020229 286 AGIGPGVYDIHSP-RIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 286 ~~i~~Gvvd~~~~-~~e~~e~i~~ri~~a~~~v~ 318 (329)
..-++||||..++ -+|+.++++.|= +.++.+|
T Consensus 138 GRgvlGVvDG~~P~GVE~eed~~~Rk-~lLr~iG 170 (173)
T 1rlh_A 138 GNGVLGVIDGYSPVGVESDADIEKRR-QFLRRIG 170 (173)
T ss_dssp SEEEEEEEESCCCCSCCC----------------
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHH-HHHHHcC
Confidence 4678999999877 599999998773 3334333
No 219
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=29.11 E-value=1.5e+02 Score=26.07 Aligned_cols=59 Identities=17% Similarity=0.204 Sum_probs=34.5
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh-HHHHHHHHhCCCcEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVITI 265 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~-~~i~~~l~~~~~d~~~l 265 (329)
++++..++|+++|++|.+. +..++. +.+.+.. ..++ .+-|+. .+-+..+.++++|++++
T Consensus 208 ea~eA~~aGaD~I~ld~~~------~~~~k~---av~~v~~----~ipi---~AsGGIt~eni~~~a~tGvD~IsV 267 (286)
T 1x1o_A 208 ELEEALEAGADLILLDNFP------LEALRE---AVRRVGG----RVPL---EASGNMTLERAKAAAEAGVDYVSV 267 (286)
T ss_dssp HHHHHHHHTCSEEEEESCC------HHHHHH---HHHHHTT----SSCE---EEESSCCHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHcCCCEEEECCCC------HHHHHH---HHHHhCC----CCeE---EEEcCCCHHHHHHHHHcCCCEEEE
Confidence 3445557899999999643 334432 2222211 1222 122544 35678888999999997
No 220
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.50 E-value=81 Score=26.10 Aligned_cols=21 Identities=19% Similarity=0.398 Sum_probs=16.7
Q ss_pred HHHHHHHHCCCCeEEecCCcc
Q 020229 190 EVISELKAAGASWIQFDEPLL 210 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l 210 (329)
+.++++.+.|+++||+-++.+
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~~ 37 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPET 37 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSSC
T ss_pred HHHHHHHHCCCCEEEEccCCC
Confidence 445667789999999998863
No 221
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=28.47 E-value=2e+02 Score=28.22 Aligned_cols=89 Identities=12% Similarity=0.097 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCeEEecC-----------CccCC--C---CChH-HHHHHHHHHHHHHcCCCCCce
Q 020229 176 SLLSLLPKILPIYKEVISELKAAGASWIQFDE-----------PLLVM--D---LDSH-KLHAFIHSFRITNCGVQDTTQ 238 (329)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~l~~aG~~~IQiDE-----------P~l~~--~---~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (329)
+.++ ++.+.+.+.+..+...++|++.|+|.- |.... | -+.+ ..+...+.+..+.+.++.+.+
T Consensus 132 t~~e-i~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~ 210 (671)
T 1ps9_A 132 SHEE-ILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFI 210 (671)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCce
Confidence 4444 467778888888888999999999973 21100 1 0111 223345555666555554566
Q ss_pred eEEeecc------cC----hHHHHHHHHhCCCcEEEE
Q 020229 239 IHTHMCY------SN----FNDIIHSIIDMDADVITI 265 (329)
Q Consensus 239 i~lH~C~------Gn----~~~i~~~l~~~~~d~~~l 265 (329)
+++-+.. |. +..++..|.+.++|.+++
T Consensus 211 v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 211 IIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp EEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence 6664431 21 225677778889999987
No 222
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=28.23 E-value=2.3e+02 Score=25.40 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=38.6
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeec--ccChHHHHHHH--HhCCCcEEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMC--YSNFNDIIHSI--IDMDADVITI 265 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C--~Gn~~~i~~~l--~~~~~d~~~l 265 (329)
+.++++.++|++.|.+-+..-.. .+..+..++..+.+. .+++.++++|+= +|-- +...+ .+.+++.+.-
T Consensus 153 ~ia~~~~~~Ga~~i~l~DT~G~~--~P~~v~~lv~~l~~~---~~~~~pi~~H~Hn~~G~a--vAn~laA~~aGa~~vd~ 225 (345)
T 1nvm_A 153 EQGKLMESYGATCIYMADSGGAM--SMNDIRDRMRAFKAV---LKPETQVGMHAHHNLSLG--VANSIVAVEEGCDRVDA 225 (345)
T ss_dssp HHHHHHHHHTCSEEEEECTTCCC--CHHHHHHHHHHHHHH---SCTTSEEEEECBCTTSCH--HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCcc--CHHHHHHHHHHHHHh---cCCCceEEEEECCCccHH--HHHHHHHHHcCCCEEEe
Confidence 33455666799999998876332 356664444444433 422366777654 3432 23333 4567776543
Q ss_pred E
Q 020229 266 E 266 (329)
Q Consensus 266 E 266 (329)
=
T Consensus 226 t 226 (345)
T 1nvm_A 226 S 226 (345)
T ss_dssp B
T ss_pred c
Confidence 3
No 223
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.14 E-value=3e+02 Score=24.06 Aligned_cols=119 Identities=13% Similarity=0.004 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++..++.+..-+... ++++++.++.--++.+. .....++++|+
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gada 102 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ---RRVPVVAGVASTSVADAVAQAKLYEKLGADG 102 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCBEEEEEESSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 4566677788899987655422211 12455555444444333332 34678888873345543 44456789999
Q ss_pred EEEEcC---C-CchhHHHHhhhcc-cCCCeeeeeeecCCCCCCCCHHHHHH
Q 020229 263 ITIENS---R-SDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSTEEIAD 308 (329)
Q Consensus 263 ~~lE~~---~-~~~~~l~~l~~~~-~~~~~i~~Gvvd~~~~~~e~~e~i~~ 308 (329)
+.+=-. . +...+.+.+...- ..+..+++=+++..+...=++|.+++
T Consensus 103 vlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 153 (300)
T 3eb2_A 103 ILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIAR 153 (300)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHH
Confidence 887632 2 2344444444310 12345666666666665566776644
No 224
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=27.99 E-value=2.8e+02 Score=24.99 Aligned_cols=116 Identities=9% Similarity=-0.144 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccC-CCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHH---HHHHHhCCCcE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLV-MDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDI---IHSIIDMDADV 262 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i---~~~l~~~~~d~ 262 (329)
++++.++.+.+.|++-|.+--.+-- ..++.++...+.+. ...+ +++++.++.--++.+. .....++++|+
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~~~g---rvpViaGvg~~st~eai~la~~A~~~Gada 121 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER---LVKA---GIPVIVGTGAVNTASAVAHAVHAQKVGAKG 121 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH---HHHT---TCCEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH---HhCC---CCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 4556677788899997776532211 12455666555555 2222 3678889884345443 44446789999
Q ss_pred EEEE--cC-C-C-chhHHHHhhhccc--CCCeeeeeeecCCCCCCCCHHHHHHH
Q 020229 263 ITIE--NS-R-S-DEKLLSVFREGVK--YGAGIGPGVYDIHSPRIPSTEEIADR 309 (329)
Q Consensus 263 ~~lE--~~-~-~-~~~~l~~l~~~~~--~~~~i~~Gvvd~~~~~~e~~e~i~~r 309 (329)
+.+= +. . . ...+.+.+...-. .+..+++=+++ ++...=++|.+++.
T Consensus 122 vlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 122 LMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYGFATRADLFFAL 174 (344)
T ss_dssp EEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGTBCCCHHHHHHH
T ss_pred EEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccCCCcCHHHHHHH
Confidence 9875 22 2 2 2344555543111 13456666666 55555577776554
No 225
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=27.76 E-value=1.5e+02 Score=28.28 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHCCCCeEEecCCc-cCCCCChH--HHHHHHHHHHHHHc-CCCCCceeEEeecccChH--------HHHHH
Q 020229 187 IYKEVISELKAAGASWIQFDEPL-LVMDLDSH--KLHAFIHSFRITNC-GVQDTTQIHTHMCYSNFN--------DIIHS 254 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~-l~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~i~lH~C~Gn~~--------~i~~~ 254 (329)
+++..+++|+.+|++-|-+|==. ++..-.+. ....+.+.++.+.+ +++-.+-+..|-|-||.. +-.-.
T Consensus 35 ~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mv~~~GLKlq~vmSFHqCGgNVGD~~~IPLP~WV~~ 114 (498)
T 1fa2_A 35 KVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQ 114 (498)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEECSCBCCCTTCCCCBCSCHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEEEeeecCCCCCCcccccCCHHHHH
Confidence 56677889999999999999211 11101111 11334444444432 554223455699988753 22333
Q ss_pred HHhCCCcEEEEEcC
Q 020229 255 IIDMDADVITIENS 268 (329)
Q Consensus 255 l~~~~~d~~~lE~~ 268 (329)
..+.+-|.++-|-.
T Consensus 115 ~~~~~pDi~ftDr~ 128 (498)
T 1fa2_A 115 IGDKNPDIFYTNRA 128 (498)
T ss_dssp HTTTCGGGEEECTT
T ss_pred hhccCCCceEECCC
Confidence 45566677776643
No 226
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=27.65 E-value=3.1e+02 Score=24.02 Aligned_cols=118 Identities=11% Similarity=0.074 Sum_probs=60.9
Q ss_pred HHHHHHCCCCeEEec--C-CccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 192 ISELKAAGASWIQFD--E-PLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 192 i~~l~~aG~~~IQiD--E-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++.+.+.|++.|.|- | |.+. .+. +.+.++.+.+. +..+.++.. .-..+.+..|.+.+++.+.+-..
T Consensus 93 i~~~~~~g~~~i~~~gGe~p~~~----~~~---~~~li~~i~~~---~~~i~~s~g-~l~~e~l~~L~~ag~~~v~i~le 161 (348)
T 3iix_A 93 ARLAVQFGAKTIVLQSGEDPYXM----PDV---ISDIVKEIKKM---GVAVTLSLG-EWPREYYEKWKEAGADRYLLRHE 161 (348)
T ss_dssp HHHHHHTTCSEEEEEESCCGGGT----THH---HHHHHHHHHTT---SCEEEEECC-CCCHHHHHHHHHHTCCEEECCCB
T ss_pred HHHHHHCCCCEEEEEeCCCCCcc----HHH---HHHHHHHHHhc---CceEEEecC-CCCHHHHHHHHHhCCCEEeeeee
Confidence 445667898855553 4 4332 122 34444444432 233333222 12356889999999988876543
Q ss_pred CCc-------------hhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcCCCceE
Q 020229 269 RSD-------------EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILW 323 (329)
Q Consensus 269 ~~~-------------~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~~~~l~ 323 (329)
... .+.++.+......|-.+..|++-... .++.+++.+.++.+.+ ++.+.+.
T Consensus 162 t~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p--~et~e~~~~~~~~l~~-l~~~~i~ 226 (348)
T 3iix_A 162 TANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLP--GQTIDDLVDDLLFLKE-HDFDMVG 226 (348)
T ss_dssp CSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCT--TCCHHHHHHHHHHHHH-HTCSEEC
T ss_pred eCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCC--CCCHHHHHHHHHHHHh-cCCCEEe
Confidence 221 12222332211234456666655432 4788888877776644 4555443
No 227
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=27.06 E-value=2.5e+02 Score=23.39 Aligned_cols=85 Identities=8% Similarity=0.017 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEec-CCccCCCCChHHHHHHHHHHHHHHcCC-CCCceeEEeecc------------cC
Q 020229 182 PKILPIYKEVISELKAAGASWIQFD-EPLLVMDLDSHKLHAFIHSFRITNCGV-QDTTQIHTHMCY------------SN 247 (329)
Q Consensus 182 ~~la~~~~~~i~~l~~aG~~~IQiD-EP~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~lH~C~------------Gn 247 (329)
.+..+.+++.++...+.||++|.+- -|... ....+.++.+.+.++.+.+.. +.++++.+|... .+
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~~~~~p~~~-~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~ 158 (281)
T 3u0h_A 80 LRELSLLPDRARLCARLGARSVTAFLWPSMD-EEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQS 158 (281)
T ss_dssp HHHHHTHHHHHHHHHHTTCCEEEEECCSEES-SCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeecCCCC-CcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCC
Confidence 3445667788888899999988742 12111 111234455666666665422 124678888651 23
Q ss_pred hHHHHHHHHhCCCc--EEEEEc
Q 020229 248 FNDIIHSIIDMDAD--VITIEN 267 (329)
Q Consensus 248 ~~~i~~~l~~~~~d--~~~lE~ 267 (329)
...++..+.+++-+ ++.+|.
T Consensus 159 ~~~~~~l~~~v~~~~vg~~~D~ 180 (281)
T 3u0h_A 159 LADLKTFWEAIGAPNVGALVDS 180 (281)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEH
T ss_pred HHHHHHHHHHcCCCCeeEEeeh
Confidence 44555555555443 444553
No 228
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=26.95 E-value=2.9e+02 Score=25.57 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=42.0
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
.+.++.+.++|+++|.||-.. .. +..+ .+.+..+.+.. +.+++++.| .+. ..+..+.++++|.+.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~---G~-~~~~---~e~I~~ik~~~--~i~Vi~g~V-~t~-e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH---GH-SLNI---IRTLKEIKSKM--NIDVIVGNV-VTE-EATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC---CS-BHHH---HHHHHHHHTTC--CCEEEEEEE-CSH-HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCC---CC-cccH---HHHHHHHHhcC--CCeEEEeec-CCH-HHHHHHHHcCCCEEEE
Confidence 356778889999999998221 11 2222 33344444444 256666677 444 4567788999999988
No 229
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=26.51 E-value=2.6e+02 Score=25.75 Aligned_cols=24 Identities=25% Similarity=0.428 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEe
Q 020229 182 PKILPIYKEVISELKAAGASWIQF 205 (329)
Q Consensus 182 ~~la~~~~~~i~~l~~aG~~~IQi 205 (329)
+...+.|++.++.+.++|+++|+.
T Consensus 100 ~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 100 DALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE
Confidence 455667888899999999999986
No 230
>2p12_A Hypothetical protein DUF402; APC7392, beta-barrel, rhodococcus SP. RHA1, structural genom 2, protein structure initiative; 1.63A {Rhodococcus SP} SCOP: b.175.1.1
Probab=25.74 E-value=1e+02 Score=25.18 Aligned_cols=37 Identities=14% Similarity=0.090 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCc
Q 020229 15 RELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIK 55 (329)
Q Consensus 15 ~eL~~a~~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld 55 (329)
.||.+|.+ +|.||.++.+.+.+.+.+ ++....++|.|
T Consensus 123 DEL~~A~~---~GlIs~e~ae~Alr~a~~-~v~~i~~~g~d 159 (176)
T 2p12_A 123 DELMEAHT---TGLLDTATAEQAILTATT-AIDGIAAHGHD 159 (176)
T ss_dssp HHHHHHHH---TTSSCHHHHHHHHHHHHH-HHHHHHHTTTC
T ss_pred HHHHHHHH---cCCCCHHHHHHHHHHHHH-HHHHHHHccCC
Confidence 46666655 699999999998877744 44555667766
No 231
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=25.70 E-value=2.2e+02 Score=28.60 Aligned_cols=19 Identities=16% Similarity=0.324 Sum_probs=14.9
Q ss_pred HHHHHHCCCCeEEecCCcc
Q 020229 192 ISELKAAGASWIQFDEPLL 210 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l 210 (329)
++.+.+.|+++|.||+-..
T Consensus 356 ad~~~~~G~~~~viDDGW~ 374 (732)
T 2xn2_A 356 VDKAKKLGLEMFVLDDGWF 374 (732)
T ss_dssp HHHHHHTTCCEEEECSSSB
T ss_pred HHHHHHcCCcEEEEcCccc
Confidence 4455778999999998665
No 232
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=25.46 E-value=3.4e+02 Score=25.53 Aligned_cols=80 Identities=9% Similarity=0.115 Sum_probs=50.1
Q ss_pred HHHHHHCCCCeEEecCCccCCCCCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChH---HHHHHHHhCCCcEEEEE
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSIIDMDADVITIE 266 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~---~i~~~l~~~~~d~~~lE 266 (329)
+.++...|+|+|-=||+.-.-...+ +-+..+.++++++.+.-.+...-.+.+. +..+ +..+...+++.+++-++
T Consensus 177 ~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-a~~~eM~~Ra~~a~e~G~~~~mvd 255 (444)
T 3kdn_A 177 AYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANIT-ADLLEMEQRLEVLADLGLKHAMVD 255 (444)
T ss_dssp HHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-SSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecC-CCHHHHHHHHHHHHHcCCCEEEEc
Confidence 3346678999999999986543333 3345667777777653221122234444 6654 45666778899999999
Q ss_pred cCCCch
Q 020229 267 NSRSDE 272 (329)
Q Consensus 267 ~~~~~~ 272 (329)
....+.
T Consensus 256 ~~~~G~ 261 (444)
T 3kdn_A 256 VVITGW 261 (444)
T ss_dssp HHHHCH
T ss_pred cccccH
Confidence 654333
No 233
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=24.99 E-value=89 Score=22.05 Aligned_cols=26 Identities=4% Similarity=0.032 Sum_probs=21.3
Q ss_pred HHHHHHHHHHh-C----CCCCHHHHHHHHHH
Q 020229 15 RELKFALESFW-D----GKSSAEDLQKVSAD 40 (329)
Q Consensus 15 ~eL~~a~~~~~-~----g~is~~el~~~~~~ 40 (329)
.+|+++...|. + |.||.+||+.+...
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~ 39 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEK 39 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHH
Confidence 57888999997 2 46999999999865
No 234
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=24.98 E-value=1.3e+02 Score=24.21 Aligned_cols=34 Identities=6% Similarity=-0.083 Sum_probs=21.1
Q ss_pred HCCCC--eEEecCCccCCCCChHHHHHHHHHHHHHH
Q 020229 197 AAGAS--WIQFDEPLLVMDLDSHKLHAFIHSFRITN 230 (329)
Q Consensus 197 ~aG~~--~IQiDEP~l~~~~~~~~~~~~~~~~~~~~ 230 (329)
..+.+ +|-||||......++.....+...+..+.
T Consensus 119 ~~~~~~~llilDe~~~~~~~d~~~~~~~~~~l~~~~ 154 (235)
T 2w0m_A 119 KLGYGKARLVIDSVSALFLDKPAMARKISYYLKRVL 154 (235)
T ss_dssp HHCSSCEEEEEETGGGGSSSCGGGHHHHHHHHHHHH
T ss_pred hhCCCceEEEEECchHhhcCCHHHHHHHHHHHHHHH
Confidence 35788 99999999554334444444455555444
No 235
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=24.61 E-value=1.8e+02 Score=25.37 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=35.1
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh-HHHHHHHHhCCCcEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVITI 265 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~-~~i~~~l~~~~~d~~~l 265 (329)
+++...++|+++|++|- ++++.++..++.++ ...+ +.++ -.- |+. .+.+..+.+.++|++++
T Consensus 194 e~~~A~~aGaD~I~ld~------~~~~~l~~~v~~l~---~~~~-~~~i--~As-GGI~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 194 EAKNAMNAGADIVMCDN------LSVLETKEIAAYRD---AHYP-FVLL--EAS-GNISLESINAYAKSGVDAISV 256 (273)
T ss_dssp HHHHHHHHTCSEEEEET------CCHHHHHHHHHHHH---HHCT-TCEE--EEE-SSCCTTTHHHHHTTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHHHHhh---ccCC-CcEE--EEE-CCCCHHHHHHHHHcCCcEEEE
Confidence 34444467999999984 33455544343332 2222 2322 122 443 34677888899998876
No 236
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=24.56 E-value=1.3e+02 Score=23.26 Aligned_cols=27 Identities=22% Similarity=0.247 Sum_probs=21.7
Q ss_pred cHHHHHHHHHHhC---CCCCHHHHHHHHHH
Q 020229 14 KRELKFALESFWD---GKSSAEDLQKVSAD 40 (329)
Q Consensus 14 ~~eL~~a~~~~~~---g~is~~el~~~~~~ 40 (329)
..+|++|.+.|.+ |.||.++|+++...
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~ 113 (159)
T 3i5g_C 84 ADEFMEAFKTFDREGQGLISSAEIRNVLKM 113 (159)
T ss_dssp HHHHHHHHHHHCTTSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcCcHHHHHHHHHH
Confidence 3679999988864 66999999998754
No 237
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=24.37 E-value=3.5e+02 Score=24.59 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=39.5
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEE
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~l 265 (329)
..+.++.+.++|+++|.+|-+.- .+ ..+ .+.++.+.+..+ +.+++.-.| .+.+ -...+.+.++|++.+
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G---~~-~~~---~e~I~~ir~~~~-~~~Vi~G~V-~T~e-~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHA---HA-KYV---GKTLKSLRQLLG-SRCIMAGNV-ATYA-GADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCC---SS-HHH---HHHHHHHHHHHT-TCEEEEEEE-CSHH-HHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCC---Cc-HhH---HHHHHHHHHhcC-CCeEEEcCc-CCHH-HHHHHHHcCCCEEEE
Confidence 34557788899999999995431 11 111 222233333222 245544244 3343 467778899999998
No 238
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=24.24 E-value=3e+02 Score=25.37 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=45.5
Q ss_pred HHHHHHCCCCeEEecCCccCCCCCh--HHHHHHHHHHHHHHcCCCCCceeE-EeecccChHH---HHHHHHhCCCcEEEE
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDS--HKLHAFIHSFRITNCGVQDTTQIH-THMCYSNFND---IIHSIIDMDADVITI 265 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~-lH~C~Gn~~~---i~~~l~~~~~d~~~l 265 (329)
+.++...|+|+|-=||+...-...+ +-+..+.++++++.+.-.+ .+.. +.+. |..++ ..+...+++.+++-+
T Consensus 152 ~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~~~eai~ra~~eTGe-~k~y~~NiT-a~~~em~~ra~~a~e~G~~~~mv 229 (378)
T 3qfw_A 152 AHQLALGGVDLIKDDHGLADQAFSPFAERAAAVGKAVREANAARGG-RTLYAPNIS-GTLDDMRRQLGVIRDEGIGAVLV 229 (378)
T ss_dssp HHHHHHTTCSEEEECTTCSSCTTSCHHHHHHHHHHHHHHHHHHHTC-CCEEECBCC-SSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHhcCCCcccCCcCcCCCCcccHHHHHHHHHHHHHHHHHhhCC-ccEEEeecC-CCHHHHHHHHHHHHHcCCCEEEE
Confidence 3456678999999999986543333 2335566777777653221 2222 2333 65543 456667788888888
Q ss_pred EcC
Q 020229 266 ENS 268 (329)
Q Consensus 266 E~~ 268 (329)
+..
T Consensus 230 d~~ 232 (378)
T 3qfw_A 230 APM 232 (378)
T ss_dssp CHH
T ss_pred ecc
Confidence 853
No 239
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=24.08 E-value=4.1e+02 Score=26.64 Aligned_cols=18 Identities=11% Similarity=0.115 Sum_probs=14.1
Q ss_pred HHHHCCCCeEEecCCccC
Q 020229 194 ELKAAGASWIQFDEPLLV 211 (329)
Q Consensus 194 ~l~~aG~~~IQiDEP~l~ 211 (329)
++.++|++++.||+-...
T Consensus 354 ~aa~lG~e~fviDDGWf~ 371 (729)
T 4fnq_A 354 TEAELGIELFVLDDGWFG 371 (729)
T ss_dssp HHHHHTCCEEEECSCCBT
T ss_pred HHHhcCccEEEEcceeec
Confidence 355689999999997643
No 240
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=23.97 E-value=35 Score=33.03 Aligned_cols=61 Identities=18% Similarity=0.114 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccCCCCC-hH--HHHHHHHHHHHHHc-CCCCCceeEEeecccC
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLVMDLD-SH--KLHAFIHSFRITNC-GVQDTTQIHTHMCYSN 247 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~~~~~-~~--~~~~~~~~~~~~~~-~~~~~~~i~lH~C~Gn 247 (329)
.+.+.++.++++|++.|.+..+.-..... +. .++.+.++++.+.+ ++..-+.+.+|.|-||
T Consensus 30 ~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~~~d~~id~a~~~GL~viv~L~~h~c~g~ 94 (516)
T 1vem_A 30 TFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGN 94 (516)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEEECSCBSSS
T ss_pred HHHHHHHHHHHcCCCEEEEecchhhccCCCCCccchHHHHHHHHHHHHCCCEEEEEecccccCCC
Confidence 56667788999999999997532111111 11 12333444444443 5541112567999654
No 241
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=23.89 E-value=2.1e+02 Score=24.77 Aligned_cols=90 Identities=4% Similarity=-0.026 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC----CC-------ChHHHHHHHHHHHHHHcCCC-CCceeEEeeccc
Q 020229 179 SLLPKILPIYKEVISELKAAGASWIQFDEPLLVM----DL-------DSHKLHAFIHSFRITNCGVQ-DTTQIHTHMCYS 246 (329)
Q Consensus 179 ~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~----~~-------~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~C~G 246 (329)
+..+...+.+++.++...+.||++|.+--..... .. ..+.++.+.+.++.+.+-.. .++++.+|.+.+
T Consensus 104 ~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 183 (340)
T 2zds_A 104 GVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPS 183 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 4445556677888888889999988874111100 00 11233455666666554221 146788888743
Q ss_pred ----ChHHHHHHHHhCC-CcEEEEEcC
Q 020229 247 ----NFNDIIHSIIDMD-ADVITIENS 268 (329)
Q Consensus 247 ----n~~~i~~~l~~~~-~d~~~lE~~ 268 (329)
+...+...+.+++ -+.+.+-++
T Consensus 184 ~~~~~~~~~~~ll~~v~~~~~vg~~~D 210 (340)
T 2zds_A 184 EIAYDYWTTHRALEAVGHRPAFGLNFD 210 (340)
T ss_dssp SSCCSHHHHHHHHHHTTTCTTEEEEEC
T ss_pred cccCCHHHHHHHHHhcCCCCCeeEEEc
Confidence 3345555555565 444554444
No 242
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=23.77 E-value=3.5e+02 Score=25.17 Aligned_cols=87 Identities=10% Similarity=0.090 Sum_probs=52.8
Q ss_pred HHHHHHCCCCeEEecCCccCCCCCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChH---HHHHHHHhCCCcEEEEE
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSIIDMDADVITIE 266 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~---~i~~~l~~~~~d~~~lE 266 (329)
+.++..-|+|+|-=||+...-...+ +-+..+.++++++.+.-.+...-.+++. +..+ +..+...+++.+++-++
T Consensus 162 ~ye~~~GGlDfiKDDE~l~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-a~~~em~~ra~~a~e~G~~~~mvd 240 (414)
T 3fk4_A 162 LRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQSVYETYGHKTLYAVNLT-GRTFDLKENAKRAVQAGADILLFN 240 (414)
T ss_dssp HHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-SCGGGHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCcCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEeEcC-CCHHHHHHHHHHHHHcCCCEEEEc
Confidence 3456678999999999986543333 2345667777777653221122233444 6654 34566678889999988
Q ss_pred cCCCchhHHHHhh
Q 020229 267 NSRSDEKLLSVFR 279 (329)
Q Consensus 267 ~~~~~~~~l~~l~ 279 (329)
....+...++.+.
T Consensus 241 ~~~~G~~a~~~l~ 253 (414)
T 3fk4_A 241 VFAYGLDVLQSLA 253 (414)
T ss_dssp HHHHCHHHHHHHH
T ss_pred ccccChHHHHHHH
Confidence 6544444444444
No 243
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=23.71 E-value=1.3e+02 Score=28.82 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHCCCCeEEecCCc-cCCCCChHH--HHHHHHHHHHHHc-CCCCCceeEEeecccChH--------HHHHH
Q 020229 187 IYKEVISELKAAGASWIQFDEPL-LVMDLDSHK--LHAFIHSFRITNC-GVQDTTQIHTHMCYSNFN--------DIIHS 254 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~-l~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~i~lH~C~Gn~~--------~i~~~ 254 (329)
+++..+++|+.+|++-|-+|==. ++..-.+.. ...+.+.++.+.+ +++-.+-+..|-|-||.. +-.-.
T Consensus 34 ~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq~vmSFHqCGgNVGD~~~IPLP~WV~~ 113 (495)
T 1wdp_A 34 GLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLD 113 (495)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEEECSCBCCSTTCSCCBCSCHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEEEeeecCCCCCCcccccCCHHHHH
Confidence 56677889999999999999211 111111111 1334444444432 554223455699988753 12223
Q ss_pred HHhCCCcEEEEEc
Q 020229 255 IIDMDADVITIEN 267 (329)
Q Consensus 255 l~~~~~d~~~lE~ 267 (329)
..+.+-|.++-|-
T Consensus 114 ~~~~~pDi~ftDr 126 (495)
T 1wdp_A 114 IGESNHDIFYTNR 126 (495)
T ss_dssp HHHHCGGGEEECT
T ss_pred hhccCCCcEEECC
Confidence 3455667666664
No 244
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=23.59 E-value=2.3e+02 Score=26.32 Aligned_cols=30 Identities=17% Similarity=0.048 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCcc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLL 210 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l 210 (329)
++.+...|+++. +.|.++|+++++||+=..
T Consensus 28 e~~i~~~ad~~~---~gl~~~G~~~~~iDDgW~ 57 (433)
T 3cc1_A 28 EEEVLGNAEYMA---NHLKKYGWEYIVVDIQWY 57 (433)
T ss_dssp HHHHHHHHHHHH---HHTGGGTCCEEEECSCTT
T ss_pred HHHHHHHHHHHH---hcchhhCCeEEEECCCcC
Confidence 455566777662 467889999999998543
No 245
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=23.51 E-value=4.6e+02 Score=24.50 Aligned_cols=86 Identities=12% Similarity=0.095 Sum_probs=54.0
Q ss_pred HHHHHCCCCeEEecCCccCCCCCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcEEEEEc
Q 020229 193 SELKAAGASWIQFDEPLLVMDLDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADVITIEN 267 (329)
Q Consensus 193 ~~l~~aG~~~IQiDEP~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~~~lE~ 267 (329)
-++..-|+|+|-=||+.-.-...+ +-+..+.++++++.+.-.+...-.+.+. +.... ..+...+++.+++-+++
T Consensus 176 ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiT-~~~~em~~Ra~~a~e~G~~~~mvd~ 254 (425)
T 2zvi_A 176 RQQALGGVDLIKDDEIFFETGLAPFETRIAEGKQILKETYEQTGHKTLYAVNLT-GRTADLKDKARRAAELGADALLFNV 254 (425)
T ss_dssp HHHHHTTCSEEECCTTCCCSSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCGGGHHHHHHHHHHTTCSEEEECG
T ss_pred HHHHhCCCCeeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceeeCcCC-CCHHHHHHHHHHHHHhCCCeEEEee
Confidence 345668999999999985433332 3345566777776643221122334555 66653 45667889999999998
Q ss_pred CCCchhHHHHhh
Q 020229 268 SRSDEKLLSVFR 279 (329)
Q Consensus 268 ~~~~~~~l~~l~ 279 (329)
...++..+..+.
T Consensus 255 ~~~G~~a~~~l~ 266 (425)
T 2zvi_A 255 FAYGLDVMQGLA 266 (425)
T ss_dssp GGTCHHHHHHHH
T ss_pred eccChHHHHHHH
Confidence 766655555544
No 246
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=23.46 E-value=4.4e+02 Score=24.27 Aligned_cols=74 Identities=7% Similarity=-0.019 Sum_probs=48.2
Q ss_pred EEeecccChHHHHHHHHhCCCcEEEEEcCC-CchhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHHHHHhcC
Q 020229 240 HTHMCYSNFNDIIHSIIDMDADVITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 318 (329)
Q Consensus 240 ~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~-~~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~a~~~v~ 318 (329)
.+-..|.-. -++.|.++++|.|=+-..+ .+...|+.+.+ .+|.+++ ++ -+-|.+||..-++-+.+ -+
T Consensus 117 ~~stpfD~~--svd~l~~~~vd~~KIgS~~~~N~pLL~~va~---~gKPViL---St---GmaTl~Ei~~Ave~i~~-~G 184 (385)
T 1vli_A 117 FLSTVCDEG--SADLLQSTSPSAFKIASYEINHLPLLKYVAR---LNRPMIF---ST---AGAEISDVHEAWRTIRA-EG 184 (385)
T ss_dssp EECBCCSHH--HHHHHHTTCCSCEEECGGGTTCHHHHHHHHT---TCSCEEE---EC---TTCCHHHHHHHHHHHHT-TT
T ss_pred EEEccCCHH--HHHHHHhcCCCEEEECcccccCHHHHHHHHh---cCCeEEE---EC---CCCCHHHHHHHHHHHHH-CC
Confidence 355554422 3788888999999998875 56778888874 3555443 22 23488888766665543 35
Q ss_pred CCceEeC
Q 020229 319 TNILWVN 325 (329)
Q Consensus 319 ~~~l~is 325 (329)
.+++++.
T Consensus 185 n~~iiLl 191 (385)
T 1vli_A 185 NNQIAIM 191 (385)
T ss_dssp CCCEEEE
T ss_pred CCcEEEE
Confidence 5677774
No 247
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=23.42 E-value=1.9e+02 Score=24.43 Aligned_cols=70 Identities=11% Similarity=-0.037 Sum_probs=38.4
Q ss_pred HHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcC
Q 020229 192 ISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (329)
Q Consensus 192 i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~ 268 (329)
++.+.++|++.|++-++.......... .+.+..+.+..+ .++.+--...+..+ +..++++++|++.+-..
T Consensus 36 a~~~~~~Ga~~i~v~d~~~~~~~~g~~----~~~i~~i~~~~~--iPvi~~ggi~~~~~-i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 36 VVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTT--LPIIASGGAGKMEH-FLEAFLAGADKALAASV 105 (266)
T ss_dssp HHHHHHHTCSEEEEEETTTSSCSSCCC----HHHHHHHGGGCC--SCEEEESCCCSTHH-HHHHHHHTCSEEECCCC
T ss_pred HHHHHHCCCCEEEEEecCcccCCCccc----HHHHHHHHHhcC--CCEEEECCCCCHHH-HHHHHHcCCcHhhhhHH
Confidence 455677899999997766432111111 122344444332 55554333233333 45566788999888754
No 248
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=23.40 E-value=2e+02 Score=25.45 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=42.0
Q ss_pred HHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEee-cccChHHHHHHHHhCCCcEEEEE
Q 020229 188 YKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHM-CYSNFNDIIHSIIDMDADVITIE 266 (329)
Q Consensus 188 ~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~-C~Gn~~~i~~~l~~~~~d~~~lE 266 (329)
..+-.+++.++||+.|.+.-+. .+.+.++++.+.+. + ..++.+.. -+|.+. .+.|.++++..+++-
T Consensus 172 ai~Ra~ay~eAGAd~i~~e~~~----~~~~~~~~i~~~~~----~---~~P~i~~~~~~~~~~--~~eL~~lGv~~v~~~ 238 (295)
T 1s2w_A 172 ALKRAEAYRNAGADAILMHSKK----ADPSDIEAFMKAWN----N---QGPVVIVPTKYYKTP--TDHFRDMGVSMVIWA 238 (295)
T ss_dssp HHHHHHHHHHTTCSEEEECCCS----SSSHHHHHHHHHHT----T---CSCEEECCSTTTTSC--HHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCC----CCHHHHHHHHHHcC----C---CCCEEEeCCCCCCCC--HHHHHHcCCcEEEEC
Confidence 3444678999999999987321 12345544444431 1 13443332 245554 789999999999998
Q ss_pred cC
Q 020229 267 NS 268 (329)
Q Consensus 267 ~~ 268 (329)
..
T Consensus 239 ~~ 240 (295)
T 1s2w_A 239 NH 240 (295)
T ss_dssp SH
T ss_pred hH
Confidence 65
No 249
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=23.18 E-value=2.9e+02 Score=27.38 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=40.9
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHc-CC-CCCceeEEeeccc---ChHHHHHHHHhCCCcEEE
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNC-GV-QDTTQIHTHMCYS---NFNDIIHSIIDMDADVIT 264 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~i~lH~C~G---n~~~i~~~l~~~~~d~~~ 264 (329)
+.++.|.++|+++|..==|... +.+.+.+ ..+.+ ++ +++..+.. .|+. +.+..++.+..++++.++
T Consensus 97 ~Ia~~L~~lGVd~IEaGfP~as----p~D~e~v----~~i~~~~l~~~~~~i~a-L~r~~~~did~a~eal~~a~~~~Vh 167 (644)
T 3hq1_A 97 RMFDLLVRMGYKEIEVGFPSAS----QTDFDFV----REIIEQGAIPDDVTIQV-LTQCRPELIERTFQACSGAPRAIVH 167 (644)
T ss_dssp HHHHHHHHHTCSEEEEECTTTC----HHHHHHH----HHHHHTTCSCTTCEEEE-EEESCHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCC----hhHHHHH----HHHHhcCCCCCCeEEEE-EecCCHhhHHHHHHHHhcCCCCEEE
Confidence 3456788999999998766643 4444433 33332 22 33444322 2322 234556677788999898
Q ss_pred EEcC
Q 020229 265 IENS 268 (329)
Q Consensus 265 lE~~ 268 (329)
+=.+
T Consensus 168 if~s 171 (644)
T 3hq1_A 168 FYNS 171 (644)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8654
No 250
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=23.04 E-value=1.8e+02 Score=27.80 Aligned_cols=84 Identities=13% Similarity=0.045 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC-----CC--ChH----HHHHHHHHHHHHHcCCCCCceeEEeeccc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM-----DL--DSH----KLHAFIHSFRITNCGVQDTTQIHTHMCYS 246 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~-----~~--~~~----~~~~~~~~~~~~~~~~~~~~~i~lH~C~G 246 (329)
++.+...++++.+ ..|.++|.++|+||+-.... ++ +++ .++.+.+. +.+ . +++++|+++.|
T Consensus 46 e~~i~~~Ad~~~~--~Gl~~~GyeyvvIDDGW~~~rd~~G~~~~d~~kFP~Glk~Lad~---ih~-~--GlKfGIw~~pG 117 (479)
T 3lrk_A 46 EQLLLDTADRISD--LGLKDMGYKYIILDDCWSSGRDSDGFLVADEQKFPNGMGHVADH---LHN-N--SFLFGMYSSAG 117 (479)
T ss_dssp HHHHHHHHHHHHH--TTCGGGTCCEEECCSSCEEEECTTSCEEECTTTCTTCHHHHHHH---HHH-T--TCEEEEEEESS
T ss_pred HHHHHHHHHHHHh--cCccccCceEEEECCccccccCCCCCEecChhhcCCCHHHHHHH---HHH-C--CCeeEEEecCc
Confidence 4444555554433 13556899999999876531 11 111 23333333 321 2 36778887764
Q ss_pred C------------hHHHHHHHHhCCCcEEEEEcCC
Q 020229 247 N------------FNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 247 n------------~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
. ....+..+.+-+||.+-+|+..
T Consensus 118 ~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~c~ 152 (479)
T 3lrk_A 118 EYTCAGYPGSLGREEEDAQFFANNRVDYLKYDNCY 152 (479)
T ss_dssp SBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEECTT
T ss_pred cccccCCCchhHHHHHHHHHHHHhCCcEEEEccCC
Confidence 2 2356777889999999999875
No 251
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=22.89 E-value=3.2e+02 Score=26.58 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=40.4
Q ss_pred HHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh--HHHHHHHHhCCCcEEEEE
Q 020229 189 KEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF--NDIIHSIIDMDADVITIE 266 (329)
Q Consensus 189 ~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~--~~i~~~l~~~~~d~~~lE 266 (329)
.+-+++|.++|+++|.||-.- .-+... .+.++.+.+..+ +..++ + ||. ......|.+.++|++-+=
T Consensus 283 ~eR~~aLv~AGvD~iviD~ah---Ghs~~v----~~~i~~ik~~~p-~~~vi---a-GNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQ---GNSVYQ----IEFIKWIKQTYP-KIDVI---A-GNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSC---CCSHHH----HHHHHHHHHHCT-TSEEE---E-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCcEEEEeccc---cccHHH----HHHHHHHHhhCC-cceEE---e-ccccCHHHHHHHHHcCCCEEeec
Confidence 445678899999999999322 122222 333444444444 34442 2 554 245777888899988776
Q ss_pred c
Q 020229 267 N 267 (329)
Q Consensus 267 ~ 267 (329)
.
T Consensus 351 i 351 (556)
T 4af0_A 351 M 351 (556)
T ss_dssp S
T ss_pred C
Confidence 4
No 252
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=22.63 E-value=1.2e+02 Score=21.60 Aligned_cols=26 Identities=19% Similarity=0.315 Sum_probs=21.2
Q ss_pred HHHHHHHHHHh--CC---CCCHHHHHHHHHH
Q 020229 15 RELKFALESFW--DG---KSSAEDLQKVSAD 40 (329)
Q Consensus 15 ~eL~~a~~~~~--~g---~is~~el~~~~~~ 40 (329)
.+|++|...|. .| .|+.+||+.+...
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~ 40 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNA 40 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHH
Confidence 57889999885 33 7999999999865
No 253
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=22.52 E-value=1.9e+02 Score=19.87 Aligned_cols=26 Identities=15% Similarity=0.277 Sum_probs=20.8
Q ss_pred HHHHHHHHHHh--CC---CCCHHHHHHHHHH
Q 020229 15 RELKFALESFW--DG---KSSAEDLQKVSAD 40 (329)
Q Consensus 15 ~eL~~a~~~~~--~g---~is~~el~~~~~~ 40 (329)
.+|+++...|. .| .||.+||+.+...
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~ 39 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINN 39 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHH
Confidence 56788888886 34 8999999998876
No 254
>2k6i_A Uncharacterized protein MJ0223; H subunit, A1AO ATP synthase, V1VO ATPase, F1FO ATP synthase, structural protein; NMR {Methanocaldococcus jannaschii}
Probab=22.48 E-value=86 Score=20.56 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=13.8
Q ss_pred eeccCCCCCCcHHHHHHHH
Q 020229 4 HIVGYPRMGPKRELKFALE 22 (329)
Q Consensus 4 ~~~G~PRp~~~~eL~~a~~ 22 (329)
|..|.||+...+++|.|-+
T Consensus 8 ~~~~~~~~EvL~eIKeAE~ 26 (56)
T 2k6i_A 8 HPMGVSVMEAIKEVKLAEE 26 (56)
T ss_dssp --CCCCCTTTSCTTCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 5688999988888887744
No 255
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=22.47 E-value=2.1e+02 Score=22.47 Aligned_cols=48 Identities=23% Similarity=0.217 Sum_probs=31.8
Q ss_pred HHHHHHHHHHh---CCCCCHHHHHHHHH--------HHHHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW---DGKSSAEDLQKVSA--------DLRSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~---~g~is~~el~~~~~--------~~~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+|+.|...|. .|.|+.+||+.+.. +.+.++++.. | =.||..++.+|+
T Consensus 84 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~-----d-d~dG~I~~~EF~ 142 (176)
T 2lhi_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-----S-DGSGEINIQQFA 142 (176)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHH-----H-TTSSCBCTTHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhh-----c-CCCCeEeHHHHH
Confidence 56888888886 46799999998874 3344444432 2 247777766543
No 256
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=21.95 E-value=3.2e+02 Score=22.19 Aligned_cols=28 Identities=11% Similarity=0.318 Sum_probs=18.9
Q ss_pred eecccChHHHHHHHHhCCCcEEEEEcCC
Q 020229 242 HMCYSNFNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 242 H~C~Gn~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
|+.-+++.+-++.+.+.++|.+.+....
T Consensus 71 ~~~i~~~~~~i~~~~~~Gad~v~l~~~~ 98 (223)
T 1y0e_A 71 DVFITATSKEVDELIESQCEVIALDATL 98 (223)
T ss_dssp CCCBSCSHHHHHHHHHHTCSEEEEECSC
T ss_pred ccccCCcHHHHHHHHhCCCCEEEEeeec
Confidence 4443455455677788899998887653
No 257
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=21.85 E-value=3.4e+02 Score=22.44 Aligned_cols=16 Identities=6% Similarity=-0.037 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHCCCC
Q 020229 186 PIYKEVISELKAAGAS 201 (329)
Q Consensus 186 ~~~~~~i~~l~~aG~~ 201 (329)
+.+...++...+.|..
T Consensus 111 ~~~~~~~~~a~~~~~p 126 (265)
T 1yix_A 111 ESFIHHIQIGRELNKP 126 (265)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 3455555555566653
No 258
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=21.60 E-value=87 Score=22.50 Aligned_cols=26 Identities=23% Similarity=0.272 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhC---CCCCHHHHHHHHHH
Q 020229 15 RELKFALESFWD---GKSSAEDLQKVSAD 40 (329)
Q Consensus 15 ~eL~~a~~~~~~---g~is~~el~~~~~~ 40 (329)
.+|++|...|.+ |.||.+||+.+...
T Consensus 36 ~el~~~F~~~D~d~~G~I~~~El~~~l~~ 64 (100)
T 2lv7_A 36 EEIREAFKVFDRDGNGFISKQELGTAMRS 64 (100)
T ss_dssp HHHHHHHHHTCSSCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 578888888854 77999999988754
No 259
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=21.50 E-value=45 Score=27.86 Aligned_cols=28 Identities=0% Similarity=-0.224 Sum_probs=23.2
Q ss_pred CCCCHHHHHH-HHHHHHHhcCCCceEeCC
Q 020229 299 RIPSTEEIAD-RINKMLAVLETNILWVNP 326 (329)
Q Consensus 299 ~~e~~e~i~~-ri~~a~~~v~~~~l~isp 326 (329)
.++|||+|++ ++++..+..|.+.+++..
T Consensus 170 ~vGtpe~v~~~~l~~~~~~~G~de~~~~~ 198 (228)
T 1nfp_A 170 AAGNFDTCLHHVAEMAQGLNNKVDFLFCF 198 (228)
T ss_dssp EEECHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 3688999999 999988888888888754
No 260
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=21.48 E-value=4.9e+02 Score=24.15 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=53.6
Q ss_pred HHHHHCCCCeEEecCCccCCCCCh--HHHHHHHHHHHHHHcCCCCCceeEEeecccChHH---HHHHHHhCCCcEEEEEc
Q 020229 193 SELKAAGASWIQFDEPLLVMDLDS--HKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDADVITIEN 267 (329)
Q Consensus 193 ~~l~~aG~~~IQiDEP~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~---i~~~l~~~~~d~~~lE~ 267 (329)
-++..-|+|+|-=||+.-.-...+ +-+..+.++++++.+.-.+...-.+++. ++... ..+...+++.+++-+++
T Consensus 162 ye~~~GGlDfiKDDE~~~~qpf~p~~eR~~~v~eai~ra~~eTGe~k~~~~NiT-~~~~em~~Ra~~a~e~G~~~~mvd~ 240 (413)
T 2oem_A 162 KKQALGGVDLVKDDEILFDSELLPFEKRITEGKAALQEVYEQTGKRTLYAVNLT-GKTFALKDKAKRAAELGADVLLFNV 240 (413)
T ss_dssp HHHHHTTCSEEECCTTCCCCSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCGGGHHHHHHHHHHTTCSEEEECG
T ss_pred HHHHhCCCceeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCcceeeCcCC-CCHHHHHHHHHHHHHhCCCeEEEee
Confidence 345667999999999885433322 3345566777776543221122334555 76653 46667889999999998
Q ss_pred CCCchhHHHHhh
Q 020229 268 SRSDEKLLSVFR 279 (329)
Q Consensus 268 ~~~~~~~l~~l~ 279 (329)
...+...+..+.
T Consensus 241 ~~~G~~a~~~l~ 252 (413)
T 2oem_A 241 FAYGLDVLQALR 252 (413)
T ss_dssp GGSCHHHHHHHH
T ss_pred eccChHHHHHHH
Confidence 765555544444
No 261
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=21.43 E-value=3.3e+02 Score=23.15 Aligned_cols=75 Identities=9% Similarity=0.029 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc----cChHHHHHHHHhCCCc
Q 020229 186 PIYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY----SNFNDIIHSIIDMDAD 261 (329)
Q Consensus 186 ~~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~----Gn~~~i~~~l~~~~~d 261 (329)
+.+++.++...+.||++|.+ +.. ...+ .+.+.+.++++.+-. .++++.+|... .+....+..+.+++-+
T Consensus 105 ~~~~~~i~~A~~lGa~~v~~--g~~-~~~~---~~~~~~~l~~l~~~a-~Gv~l~lE~~~~~~~~~~~~~~~l~~~v~~~ 177 (296)
T 2g0w_A 105 KKEQTTFHMARLFGVKHINC--GLL-EKIP---EEQIIVALGELCDRA-EELIIGLEFMPYSGVADLQAAWRVAEACGRD 177 (296)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--CCC-SCCC---HHHHHHHHHHHHHHH-TTSEEEEECCTTSSSCSHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHcCCCEEEE--cCC-CCCC---HHHHHHHHHHHHHHh-cCCEEEEEecCCCCCCCHHHHHHHHHHhCCC
Confidence 45566777778899998887 222 1122 333444444444322 35788888762 2344566666555443
Q ss_pred --EEEEEc
Q 020229 262 --VITIEN 267 (329)
Q Consensus 262 --~~~lE~ 267 (329)
++.+|.
T Consensus 178 ~vgl~~D~ 185 (296)
T 2g0w_A 178 NAQLICDT 185 (296)
T ss_dssp TEEEEEEH
T ss_pred CeEEEEeh
Confidence 455554
No 262
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=21.43 E-value=1.3e+02 Score=21.10 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=30.6
Q ss_pred HHHHHHHHHHh---CCCCCHHHHHHHHHH------HHHHHHHHHHHhCCccccCCCcccchhH
Q 020229 15 RELKFALESFW---DGKSSAEDLQKVSAD------LRSSIWKQMSEAGIKYIPSNTFSYYDQV 68 (329)
Q Consensus 15 ~eL~~a~~~~~---~g~is~~el~~~~~~------~~~~~i~~Q~~~Gld~itdGe~~~~d~~ 68 (329)
.+++++...+. .|.|+.+||+.+... .+.++++. +|.=.||.+.+..|+
T Consensus 10 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~-----~D~d~dG~i~~~EF~ 67 (95)
T 1c07_A 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSL-----CDTKDCGKLSKDQFA 67 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHH-----HCTTCSSSEETTTHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHH-----HCCCCCCcCCHHHHH
Confidence 56777777776 367999999988743 33333332 233346777766553
No 263
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=21.34 E-value=55 Score=30.03 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=27.1
Q ss_pred CCCHHHHHHHHHHHHHhcCCCceEeCCCC
Q 020229 300 IPSTEEIADRINKMLAVLETNILWVNPDL 328 (329)
Q Consensus 300 ~e~~e~i~~ri~~a~~~v~~~~l~ispdC 328 (329)
+.+.+.|+++|++.++.++.+.|+|++|.
T Consensus 261 lPSle~I~rqIk~~vk~~~lksVFIATDa 289 (362)
T 3zy2_A 261 SPSKQQILEQIVEKVGSIGAKSVFVASDK 289 (362)
T ss_dssp SCCHHHHHHHHHHHHHHHTCSEEEEEESS
T ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEecCC
Confidence 68999999999999999999999999885
No 264
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=21.31 E-value=3.7e+02 Score=24.84 Aligned_cols=84 Identities=11% Similarity=0.122 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeEEecCCccCC------CC--ChH----HHHHHHHHHHHHHcCCCCCceeEEeecc
Q 020229 178 LSLLPKILPIYKEVISELKAAGASWIQFDEPLLVM------DL--DSH----KLHAFIHSFRITNCGVQDTTQIHTHMCY 245 (329)
Q Consensus 178 ~~l~~~la~~~~~~i~~l~~aG~~~IQiDEP~l~~------~~--~~~----~~~~~~~~~~~~~~~~~~~~~i~lH~C~ 245 (329)
++.+...++++.+ ..|.++|+++|+||+-.... ++ +++ .++.+.+ .+.+ . +++++||+..
T Consensus 28 e~~i~~~ad~~~~--~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~---~i~~-~--Glk~Giw~~~ 99 (417)
T 1szn_A 28 ESKFLSAAELIVS--SGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAK---KVHA-L--GLKLGIYSTA 99 (417)
T ss_dssp HHHHHHHHHHHHH--TTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHH---HHHH-T--TCEEEEEEES
T ss_pred HHHHHHHHHHHHH--cCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHH---HHHH-c--CCEEEEEeCC
Confidence 4445555555543 34678999999999866432 11 112 3433333 3332 1 3677887765
Q ss_pred cC------------hHHHHHHHHhCCCcEEEEEcCC
Q 020229 246 SN------------FNDIIHSIIDMDADVITIENSR 269 (329)
Q Consensus 246 Gn------------~~~i~~~l~~~~~d~~~lE~~~ 269 (329)
|. ...-...+.+-+||.+-+|+..
T Consensus 100 g~~~c~~~Pgs~~~~~~d~~~~~~wGvdylK~D~~~ 135 (417)
T 1szn_A 100 GTATCAGYPASLGYEDVDAADFADWGVDYLKYDNCN 135 (417)
T ss_dssp SSBCTTSCBCCTTCHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCchhccCcchHhHHHHHHHHHHHcCCCEEEECCCC
Confidence 43 2234667788999999999873
No 265
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=21.28 E-value=3.8e+02 Score=22.71 Aligned_cols=96 Identities=13% Similarity=0.136 Sum_probs=54.8
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHHHhCCCcEEEEEcCCC
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 270 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l~~~~~d~~~lE~~~~ 270 (329)
.+++|.+.|+++||+.--+ +... +.+..+.+.++ +..++.-+.. + .+-++...+.+++.+.... .
T Consensus 51 ~a~al~~gGi~~iEvt~~t------~~a~----e~I~~l~~~~~-~~~iGaGTVl-t-~~~a~~Ai~AGA~fIvsP~--~ 115 (232)
T 4e38_A 51 LGKVLAENGLPAAEITFRS------DAAV----EAIRLLRQAQP-EMLIGAGTIL-N-GEQALAAKEAGATFVVSPG--F 115 (232)
T ss_dssp HHHHHHHTTCCEEEEETTS------TTHH----HHHHHHHHHCT-TCEEEEECCC-S-HHHHHHHHHHTCSEEECSS--C
T ss_pred HHHHHHHCCCCEEEEeCCC------CCHH----HHHHHHHHhCC-CCEEeECCcC-C-HHHHHHHHHcCCCEEEeCC--C
Confidence 3567888999999995211 1122 22233333344 3555544442 2 3457888889999887432 2
Q ss_pred chhHHHHhhhcccCCCeeeeeeecCCCCCCCCHHHHHHHHHH
Q 020229 271 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINK 312 (329)
Q Consensus 271 ~~~~l~~l~~~~~~~~~i~~Gvvd~~~~~~e~~e~i~~ri~~ 312 (329)
..+..+...+ .+..+.+|+. ||+|+.+-++.
T Consensus 116 ~~~vi~~~~~---~gi~~ipGv~--------TptEi~~A~~~ 146 (232)
T 4e38_A 116 NPNTVRACQE---IGIDIVPGVN--------NPSTVEAALEM 146 (232)
T ss_dssp CHHHHHHHHH---HTCEEECEEC--------SHHHHHHHHHT
T ss_pred CHHHHHHHHH---cCCCEEcCCC--------CHHHHHHHHHc
Confidence 3445555443 2667778863 67777655443
No 266
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=21.22 E-value=2.1e+02 Score=25.23 Aligned_cols=63 Identities=16% Similarity=0.265 Sum_probs=36.7
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccCh-HHHHHHHHhCCCcEEEEE
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVITIE 266 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~-~~i~~~l~~~~~d~~~lE 266 (329)
+++...++|+++|++|- ++.+.++..++.++ ...+ ..++ - .-|+. .+.+..+.++++|++++=
T Consensus 209 e~~~A~~aGaD~I~ld~------~~~~~l~~~v~~l~---~~~~-~~~I--~-ASGGIt~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 209 EAVQAAEAGADLVLLDN------FKPEELHPTATVLK---AQFP-SVAV--E-ASGGITLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHHHHTTCSEEEEES------CCHHHHHHHHHHHH---HHCT-TSEE--E-EESSCCTTTHHHHCCTTCCEEECT
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHHHHhh---ccCC-CeeE--E-EECCCCHHHHHHHHHCCCCEEEEC
Confidence 45555678999999984 33455544443332 2222 2332 1 22544 246778889999998873
No 267
>3gzf_A Replicase polyprotein 1AB; FCOV, NSP4, viral protein; 2.76A {Feline coronavirus}
Probab=21.17 E-value=1.8e+02 Score=21.12 Aligned_cols=36 Identities=8% Similarity=0.075 Sum_probs=32.0
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHHHHHhCCccc
Q 020229 22 ESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYI 57 (329)
Q Consensus 22 ~~~~~g~is~~el~~~~~~~~~~~i~~Q~~~Gld~i 57 (329)
-+|..|..++++++++.......++..-.+.|-|++
T Consensus 49 YKYySGs~~~adYr~Ac~AhLakAl~~fs~~g~d~L 84 (96)
T 3gzf_A 49 YKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDKL 84 (96)
T ss_dssp HHSCCSCCCHHHHHHHHHHHHHHHHHHHHHSCCCEE
T ss_pred hccccCCcchHHHHHHHHHHHHHHHHHHhccCCcee
Confidence 355689999999999999999999999999998876
No 268
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=21.13 E-value=4.9e+02 Score=24.03 Aligned_cols=89 Identities=12% Similarity=0.230 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHH-HHHHHHHHHHCCCCeEEecCCc-------cCC--CC-------ChHH-HHHHHHHHHHHHcCCCCCc
Q 020229 176 SLLSLLPKILPI-YKEVISELKAAGASWIQFDEPL-------LVM--DL-------DSHK-LHAFIHSFRITNCGVQDTT 237 (329)
Q Consensus 176 ~~~~l~~~la~~-~~~~i~~l~~aG~~~IQiDEP~-------l~~--~~-------~~~~-~~~~~~~~~~~~~~~~~~~ 237 (329)
+.++ +..+.+. +.+..+...++|++.|+|.--- |+. +- +.+. .+...+.++.+.+.++.+
T Consensus 158 t~~e-I~~ii~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~- 235 (407)
T 3tjl_A 158 TTQE-VKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGAD- 235 (407)
T ss_dssp CHHH-HHHHHHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCC-
Confidence 4445 4667777 8888888899999999998532 111 00 1111 123345555555544433
Q ss_pred eeEEeec-cc---------C-------hHHHHHHH---HhCC--CcEEEEE
Q 020229 238 QIHTHMC-YS---------N-------FNDIIHSI---IDMD--ADVITIE 266 (329)
Q Consensus 238 ~i~lH~C-~G---------n-------~~~i~~~l---~~~~--~d~~~lE 266 (329)
+|++-+. ++ + +..++..| .+.+ ++.+++=
T Consensus 236 ~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~ 286 (407)
T 3tjl_A 236 KIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVV 286 (407)
T ss_dssp GEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred eEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEE
Confidence 5677666 22 2 23466777 6777 9999975
No 269
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=20.94 E-value=2.7e+02 Score=23.26 Aligned_cols=68 Identities=13% Similarity=0.024 Sum_probs=34.8
Q ss_pred HHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChH--HHHHHHHhCCCcEEEEEc
Q 020229 191 VISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFN--DIIHSIIDMDADVITIEN 267 (329)
Q Consensus 191 ~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~--~i~~~l~~~~~d~~~lE~ 267 (329)
.++.+.++|+++|++-+..-........ .+.+.++.+... .++.+ . |... +-+..+++.++|.+.+-.
T Consensus 40 ~a~~~~~~G~~~i~v~d~~~~~~~~~~~----~~~i~~i~~~~~--ipvi~--~-Ggi~~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 40 WVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTT--LPIIA--S-GGAGKMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTCSSCCC----HHHHHHHGGGCC--SCEEE--E-SCCCSHHHHHHHHHTTCSEECCSH
T ss_pred HHHHHHHcCCCEEEEEecCcccCCCccc----HHHHHHHHHhCC--CCEEE--e-CCCCCHHHHHHHHHcCCCeeehhh
Confidence 4556778999999987643221111111 122344444432 34422 2 3221 235555677888877654
No 270
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=20.85 E-value=1.6e+02 Score=28.46 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHCCCCeEEecCCc-cCCCCChHH--HHHHHHHHHHHHc-CCCCCceeEEeecccChH--------HHHH
Q 020229 186 PIYKEVISELKAAGASWIQFDEPL-LVMDLDSHK--LHAFIHSFRITNC-GVQDTTQIHTHMCYSNFN--------DIIH 253 (329)
Q Consensus 186 ~~~~~~i~~l~~aG~~~IQiDEP~-l~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~i~lH~C~Gn~~--------~i~~ 253 (329)
++++..+++|+.+|++-|-+|==. ++..-.+.. ...+.+.++.+.+ +++-.+-+..|-|-||.. +-.-
T Consensus 31 ~~l~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mvr~~GLKlq~vmSFHqCGgNVGD~~~IPLP~WV~ 110 (535)
T 2xfr_A 31 DELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVR 110 (535)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEEECSCBCCSTTCSCCBCSCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEEEeeecCCCCCCcccccCCHHHH
Confidence 356677889999999999999211 111111211 2334444444432 554223455699977753 1222
Q ss_pred HHHhCCCcEEEEEc
Q 020229 254 SIIDMDADVITIEN 267 (329)
Q Consensus 254 ~l~~~~~d~~~lE~ 267 (329)
...+.+-|.++-|-
T Consensus 111 e~~~~~pDi~ftDr 124 (535)
T 2xfr_A 111 DVGTRDPDIFYTDG 124 (535)
T ss_dssp HHHHHCGGGEEECT
T ss_pred HhhhcCCCceEEcC
Confidence 33455666666664
No 271
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=20.76 E-value=3.3e+02 Score=23.37 Aligned_cols=67 Identities=9% Similarity=-0.011 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecc-cC--hHHHHHHHHhCCCcEE
Q 020229 187 IYKEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCY-SN--FNDIIHSIIDMDADVI 263 (329)
Q Consensus 187 ~~~~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~-Gn--~~~i~~~l~~~~~d~~ 263 (329)
...+..+++.++||+.|.+.-+ .+.+.. .++.+.++ .++-+ +|. |. +..-.+.|.++++..+
T Consensus 169 ~ai~ra~a~~eAGAd~i~~e~~-----~~~~~~-------~~i~~~~~--~P~n~-~~~~~~~~p~~~~~eL~~lGv~~v 233 (255)
T 2qiw_A 169 EAIKRIKLMEQAGARSVYPVGL-----STAEQV-------ERLVDAVS--VPVNI-TAHPVDGHGAGDLATLAGLGVRRV 233 (255)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC-----CSHHHH-------HHHHTTCS--SCBEE-ECBTTTBBTTBCHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHcCCcEEEEcCC-----CCHHHH-------HHHHHhCC--CCEEE-EecCCCCCCCCCHHHHHHcCCCEE
Confidence 3444577899999999999532 122333 34445554 23322 242 21 0123788889999988
Q ss_pred EEEcC
Q 020229 264 TIENS 268 (329)
Q Consensus 264 ~lE~~ 268 (329)
++-..
T Consensus 234 ~~~~~ 238 (255)
T 2qiw_A 234 TFGPL 238 (255)
T ss_dssp ECTTH
T ss_pred EEHHH
Confidence 87654
No 272
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=20.19 E-value=4.3e+02 Score=24.61 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=38.5
Q ss_pred HHHHHHHHCCCCeEEecCCccCCCCChHHHHHHHHHHHHHHcCCCCCceeEEeecccChHHHHHHH--HhCCCcEEEEEc
Q 020229 190 EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFIHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSI--IDMDADVITIEN 267 (329)
Q Consensus 190 ~~i~~l~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~C~Gn~~~i~~~l--~~~~~d~~~lE~ 267 (329)
+.++++.++||+.|.|-|..-. ..+..+..++..+... .+....++.|.=+|-.. ...+ .+.+++.+..=.
T Consensus 184 ~v~~~~~~~Ga~~i~l~DTvG~--~~P~~v~~lv~~l~~~---~~~~i~~H~Hnd~GlAv--AN~laAv~aGa~~vd~ti 256 (423)
T 3ivs_A 184 SLYKAVDKIGVNRVGIADTVGC--ATPRQVYDLIRTLRGV---VSCDIECHFHNDTGMAI--ANAYCALEAGATHIDTSI 256 (423)
T ss_dssp HHHHHHHHHCCSEEEEEETTSC--CCHHHHHHHHHHHHHH---CSSEEEEEEBCTTSCHH--HHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHhCCCccccCCccCc--CCHHHHHHHHHHHHhh---cCCeEEEEECCCCchHH--HHHHHHHHhCCCEEEEec
Confidence 3345566789999988877633 3455554444444332 22123334444455443 3444 457888655544
Done!