Query 020230
Match_columns 329
No_of_seqs 232 out of 1433
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020230.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020230hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 2.2E-65 4.8E-70 474.9 28.5 316 11-329 18-333 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 1.1E-44 2.5E-49 327.1 22.4 237 16-287 1-240 (240)
3 cd00505 Glyco_transf_8 Members 100.0 1.9E-38 4.2E-43 287.7 17.3 224 17-261 2-246 (246)
4 PRK15171 lipopolysaccharide 1, 100.0 6.6E-39 1.4E-43 301.8 14.3 260 14-302 24-304 (334)
5 cd06914 GT8_GNT1 GNT1 is a fun 100.0 3.9E-37 8.5E-42 280.1 18.3 230 16-286 1-277 (278)
6 cd04194 GT8_A4GalT_like A4GalT 100.0 2.4E-36 5.2E-41 274.2 12.9 219 22-260 5-247 (248)
7 COG1442 RfaJ Lipopolysaccharid 100.0 6.3E-36 1.4E-40 277.2 14.5 222 22-263 7-248 (325)
8 cd06431 GT8_LARGE_C LARGE cata 100.0 2.2E-35 4.8E-40 271.2 16.3 240 16-287 3-271 (280)
9 cd06429 GT8_like_1 GT8_like_1 100.0 4.6E-35 1E-39 265.5 14.4 213 22-285 5-257 (257)
10 PF01501 Glyco_transf_8: Glyco 100.0 5.7E-35 1.2E-39 263.3 12.6 225 22-262 4-249 (250)
11 PLN02523 galacturonosyltransfe 100.0 1.2E-29 2.6E-34 244.3 14.1 253 11-287 244-548 (559)
12 cd06430 GT8_like_2 GT8_like_2 100.0 5.5E-29 1.2E-33 228.4 15.9 216 20-257 4-257 (304)
13 PLN02718 Probable galacturonos 100.0 5.7E-29 1.2E-33 242.4 13.4 252 12-286 310-591 (603)
14 cd06432 GT8_HUGT1_C_like The C 100.0 3.5E-28 7.6E-33 220.1 13.8 214 22-253 6-239 (248)
15 PLN02867 Probable galacturonos 99.9 1.3E-27 2.8E-32 230.5 7.3 177 91-286 329-523 (535)
16 PLN02659 Probable galacturonos 99.9 1.7E-27 3.7E-32 228.9 7.6 181 91-288 328-523 (534)
17 PLN02769 Probable galacturonos 99.9 1.1E-26 2.4E-31 227.3 12.3 170 91-287 436-619 (629)
18 PLN02870 Probable galacturonos 99.9 1.9E-27 4E-32 228.5 5.6 180 91-287 327-521 (533)
19 PLN02742 Probable galacturonos 99.9 1.6E-25 3.6E-30 215.6 13.4 176 91-287 337-524 (534)
20 PLN02829 Probable galacturonos 99.9 3.8E-26 8.3E-31 222.2 7.3 175 91-287 441-628 (639)
21 PLN02910 polygalacturonate 4-a 99.9 3.3E-25 7.1E-30 215.4 6.7 173 92-286 460-645 (657)
22 COG5597 Alpha-N-acetylglucosam 99.6 2.9E-17 6.2E-22 147.2 -0.8 241 24-282 67-353 (368)
23 KOG1950 Glycosyl transferase, 99.2 5.6E-11 1.2E-15 114.0 7.5 200 94-294 113-327 (369)
24 PF11051 Mannosyl_trans3: Mann 98.3 3.1E-06 6.6E-11 77.9 8.5 110 16-130 2-115 (271)
25 PF03407 Nucleotid_trans: Nucl 98.0 4.4E-05 9.6E-10 67.4 10.1 170 57-253 12-201 (212)
26 KOG1879 UDP-glucose:glycoprote 97.3 0.0012 2.6E-08 70.2 10.2 219 22-263 1187-1427(1470)
27 PLN03182 xyloglucan 6-xylosylt 95.8 0.033 7.1E-07 53.3 7.6 85 175-263 243-366 (429)
28 PF07801 DUF1647: Protein of u 95.2 0.14 3.1E-06 42.2 8.6 63 2-67 48-110 (142)
29 PF05637 Glyco_transf_34: gala 94.3 0.024 5.2E-07 51.2 1.9 77 173-253 141-231 (239)
30 KOG1928 Alpha-1,4-N-acetylgluc 90.4 0.33 7.1E-06 46.2 4.0 72 110-217 242-316 (409)
31 KOG4748 Subunit of Golgi manno 85.2 2.7 5.9E-05 40.0 6.7 143 103-253 173-332 (364)
32 PLN03181 glycosyltransferase; 80.7 3.9 8.5E-05 39.6 5.9 103 104-231 197-326 (453)
33 cd04186 GT_2_like_c Subfamily 72.4 20 0.00043 28.8 7.5 81 29-121 9-90 (166)
34 PRK15384 type III secretion sy 71.9 2.7 5.8E-05 37.7 2.1 32 105-138 215-246 (336)
35 PF04488 Gly_transf_sug: Glyco 71.9 2.1 4.5E-05 33.0 1.3 89 33-128 5-99 (103)
36 PRK15383 type III secretion sy 71.0 3 6.5E-05 37.4 2.2 32 105-138 218-249 (335)
37 cd00761 Glyco_tranf_GTA_type G 69.6 11 0.00023 29.4 5.1 83 29-123 9-95 (156)
38 PRK15382 non-LEE encoded effec 67.9 4.5 9.7E-05 36.3 2.6 32 105-138 210-241 (326)
39 PF04765 DUF616: Protein of un 67.7 16 0.00036 34.1 6.4 103 11-128 60-175 (305)
40 cd02515 Glyco_transf_6 Glycosy 65.3 45 0.00098 30.6 8.6 184 24-231 42-247 (271)
41 cd06439 CESA_like_1 CESA_like_ 64.1 14 0.0003 32.5 5.2 102 13-128 28-133 (251)
42 PRK11204 N-glycosyltransferase 62.8 18 0.00038 35.0 6.1 99 14-127 54-157 (420)
43 cd06423 CESA_like CESA_like is 61.6 19 0.0004 28.8 5.2 87 30-125 10-99 (180)
44 cd02525 Succinoglycan_BP_ExoA 61.3 27 0.00059 30.3 6.5 87 30-126 13-103 (249)
45 TIGR03469 HonB hopene-associat 60.8 21 0.00046 34.3 6.1 22 106-127 134-156 (384)
46 PF00535 Glycos_transf_2: Glyc 59.0 21 0.00045 28.4 5.0 87 27-128 11-102 (169)
47 cd06434 GT2_HAS Hyaluronan syn 56.8 55 0.0012 28.2 7.7 93 30-136 14-110 (235)
48 cd06427 CESA_like_2 CESA_like_ 56.0 48 0.0011 29.1 7.2 83 30-121 14-100 (241)
49 cd06437 CESA_CaSu_A2 Cellulose 55.9 80 0.0017 27.4 8.6 18 104-121 86-103 (232)
50 KOG1950 Glycosyl transferase, 54.5 6 0.00013 38.0 1.1 36 92-127 150-185 (369)
51 cd06433 GT_2_WfgS_like WfgS an 54.4 40 0.00088 27.9 6.2 85 30-126 11-97 (202)
52 PF10111 Glyco_tranf_2_2: Glyc 53.1 28 0.0006 31.9 5.3 24 104-127 87-111 (281)
53 cd02520 Glucosylceramide_synth 50.3 22 0.00047 30.2 3.9 17 104-120 85-101 (196)
54 cd04185 GT_2_like_b Subfamily 49.9 47 0.001 28.0 6.0 85 30-121 10-95 (202)
55 cd06421 CESA_CelA_like CESA_Ce 49.1 75 0.0016 27.2 7.3 82 31-121 16-100 (234)
56 cd04195 GT2_AmsE_like GT2_AmsE 49.0 54 0.0012 27.5 6.2 18 104-121 79-96 (201)
57 cd02514 GT13_GLCNAC-TI GT13_GL 48.7 73 0.0016 30.3 7.4 24 104-127 96-119 (334)
58 cd02522 GT_2_like_a GT_2_like_ 47.2 64 0.0014 27.5 6.4 76 30-121 12-88 (221)
59 cd02510 pp-GalNAc-T pp-GalNAc- 46.1 36 0.00078 31.1 4.9 88 29-128 11-107 (299)
60 cd06442 DPM1_like DPM1_like re 44.4 26 0.00057 30.0 3.5 23 105-127 78-101 (224)
61 COG0463 WcaA Glycosyltransfera 43.7 75 0.0016 25.5 6.1 86 27-122 13-99 (291)
62 cd02511 Beta4Glucosyltransfera 41.9 82 0.0018 27.5 6.4 75 30-121 13-87 (229)
63 PF01793 Glyco_transf_15: Glyc 41.7 85 0.0018 29.8 6.6 114 12-127 53-197 (328)
64 PRK10073 putative glycosyl tra 41.4 75 0.0016 29.8 6.3 85 30-127 19-108 (328)
65 cd06438 EpsO_like EpsO protein 39.7 1.8E+02 0.0038 24.1 7.9 84 30-121 10-97 (183)
66 PLN02726 dolichyl-phosphate be 38.5 73 0.0016 28.0 5.5 23 105-127 93-116 (243)
67 PF03314 DUF273: Protein of un 37.5 22 0.00047 31.4 1.8 43 176-218 81-127 (222)
68 cd04192 GT_2_like_e Subfamily 37.1 73 0.0016 27.1 5.2 24 104-127 81-105 (229)
69 cd06420 GT2_Chondriotin_Pol_N 36.9 78 0.0017 25.9 5.2 87 30-127 10-102 (182)
70 cd06913 beta3GnTL1_like Beta 1 36.4 1.2E+02 0.0025 26.0 6.4 26 101-126 80-106 (219)
71 TIGR03472 HpnI hopanoid biosyn 35.7 46 0.00099 31.8 4.0 18 104-121 125-142 (373)
72 cd04184 GT2_RfbC_Mx_like Myxoc 34.4 99 0.0022 25.8 5.5 22 105-126 83-105 (202)
73 PRK14583 hmsR N-glycosyltransf 34.2 87 0.0019 30.7 5.7 18 104-121 154-171 (444)
74 cd04179 DPM_DPG-synthase_like 34.1 41 0.00089 27.7 3.0 90 30-128 10-103 (185)
75 TIGR03111 glyc2_xrt_Gpos1 puta 31.9 91 0.002 30.6 5.4 100 13-126 48-153 (439)
76 KOG4472 Glycolipid 2-alpha-man 31.4 1.6E+02 0.0034 28.5 6.6 58 8-67 75-135 (399)
77 COG5020 KTR1 Mannosyltransfera 31.4 1.6E+02 0.0034 28.5 6.6 58 8-67 75-135 (399)
78 PF03071 GNT-I: GNT-I family; 31.3 1.4E+02 0.003 29.5 6.4 106 19-128 97-214 (434)
79 cd04196 GT_2_like_d Subfamily 31.2 1.1E+02 0.0023 25.7 5.2 90 30-128 11-103 (214)
80 PRK10063 putative glycosyl tra 31.0 2.6E+02 0.0055 25.0 7.8 18 105-122 82-99 (248)
81 PRK10714 undecaprenyl phosphat 30.3 4E+02 0.0087 24.9 9.4 15 105-119 90-104 (325)
82 PF03452 Anp1: Anp1; InterPro 27.2 2.3E+02 0.0051 26.0 6.8 49 8-57 19-67 (269)
83 PRK11498 bcsA cellulose syntha 27.2 4.7E+02 0.01 28.3 10.0 60 51-122 297-356 (852)
84 PF07069 PRRSV_2b: Porcine rep 23.5 17 0.00036 25.3 -1.0 14 303-316 9-22 (73)
85 PRK05454 glucosyltransferase M 21.5 2.6E+02 0.0057 29.4 6.7 34 104-137 219-255 (691)
86 cd04187 DPM1_like_bac Bacteria 21.4 1.7E+02 0.0037 24.0 4.6 23 106-128 81-104 (181)
87 COG1215 Glycosyltransferases, 21.1 1.6E+02 0.0036 28.2 5.0 85 35-128 73-161 (439)
88 PRK13915 putative glucosyl-3-p 20.2 3.1E+02 0.0068 25.4 6.5 89 30-127 44-139 (306)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=2.2e-65 Score=474.91 Aligned_cols=316 Identities=81% Similarity=1.419 Sum_probs=279.9
Q ss_pred CCCCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhcc
Q 020230 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAY 90 (329)
Q Consensus 11 ~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~ 90 (329)
+..+++||||+|++|++|++|+.+|++||+++++.+++++++++++++++++.|++.|+.+++|+++.+++++.++..++
T Consensus 18 ~~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~ 97 (333)
T PLN00176 18 AKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAY 97 (333)
T ss_pred cccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccch
Confidence 34679999999999999999999999999999999999999999999999999999999999999887665555555555
Q ss_pred ccccccceecccccccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCCcccC
Q 020230 91 YVINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMG 170 (329)
Q Consensus 91 ~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg 170 (329)
...+|+||++|+|.+||||||||||+||++||++||+++.+.+|||.||+|+..+++++++.+++|+.+|++.+||..+|
T Consensus 98 ~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g 177 (333)
T PLN00176 98 YVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELG 177 (333)
T ss_pred hhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhcc
Confidence 67789999999999999999999999999999999999877899999999998899999999999999999999998777
Q ss_pred CCCCCcccceEEEEecChHhHHHHHHHHhcCCCCCCCChHHHHHHhcCceeecCCCCCcchhhhhhccccCCCCCeEEEE
Q 020230 171 SPPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLENVDVDKVKVVH 250 (329)
Q Consensus 171 ~~~~~yfNsGVmlin~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~IiH 250 (329)
.++..||||||||+||+.++++++++.++.+....|+|||+||.+|.++|..||.+||++..+.|++++.++.++++|||
T Consensus 178 ~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~~~~~~~vkIIH 257 (333)
T PLN00176 178 PPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVELDKVKVVH 257 (333)
T ss_pred CCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhChhhcccCCcEEEE
Confidence 65678999999999999999999999987766678999999999999999999999999988878888777778999999
Q ss_pred eeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhccccccccccCCcCCCccccccchhhhcccCccccccccCCCCC
Q 020230 251 YCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDESLDYKNFIVPATTNSEKIGSLFVTALSEDGVVVQQRNAPSAA 329 (329)
Q Consensus 251 f~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (329)
|+|+..|||+..+.++++++++...+.++||++|+++..+.|+..... ...++. .-|+.|++|.|+ |.-..|||||
T Consensus 258 Y~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 333 (333)
T PLN00176 258 YCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKNFVPAD-EEEVKL-QPFIAALSEAGV-VSYVPAPSAA 333 (333)
T ss_pred eeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcccccccccccccc-cccccc-chhhhhcccccc-cccccCCCCC
Confidence 996357999998888899888888999999999999999999887653 223333 357789999996 5556699997
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.1e-44 Score=327.14 Aligned_cols=237 Identities=42% Similarity=0.759 Sum_probs=194.9
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccc
Q 020230 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINY 95 (329)
Q Consensus 16 ~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y 95 (329)
.||||++ +|++|+++++|+++||++++++++++++++++++++.++.|++.+.+++.++.+..+.........++..+|
T Consensus 1 ~ay~t~~-~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLL-TNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEe-cChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 4899965 699999999999999999999999998888899999999999999888888876654221111223456789
Q ss_pred cceecccccccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCCcccCCCCCC
Q 020230 96 SKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPL 175 (329)
Q Consensus 96 ~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg~~~~~ 175 (329)
+||++|++.++|||||||+|++|++||++||+. ...++|+.|.. | ..
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~-~~~~~a~~d~~------------------------~--------~~ 126 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDL-PGEFAAAPDCG------------------------W--------PD 126 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCC-CCceeeecccC------------------------c--------cc
Confidence 999999999999999999999999999999998 44588876531 0 26
Q ss_pred cccceEEEEecChHhHHHHHHHHhcCCCCCCCChHHHHHHhcCc--eeecCCCCCcchhhhhhccc-cCCCCCeEEEEee
Q 020230 176 YFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDI--YKPIPPTYNLVVAMLWRHLE-NVDVDKVKVVHYC 252 (329)
Q Consensus 176 yfNsGVmlin~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~--~~~Lp~~yN~~~~~~~~~~~-~~~~~~~~IiHf~ 252 (329)
|||||||+++++...++++++.+.+..++.++||++||.+|+++ |..||.+||++....+..++ .+...+++||||+
T Consensus 127 ~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 127 LFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred cccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 89999999999999999999999876557789999999999999 99999999998765433322 2336789999999
Q ss_pred CCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 253 AAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 253 g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
| ..|||+....+.+....+.......||+.|.++
T Consensus 207 g-~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 207 G-GDKPWSWWRDPETKEKDDYNELHQWWWDIYDEL 240 (240)
T ss_pred C-CCCCCCCCcCCCcccccchHHHHHHHHHHHhhC
Confidence 9 799999876544433445678999999999864
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1.9e-38 Score=287.69 Aligned_cols=224 Identities=25% Similarity=0.424 Sum_probs=159.9
Q ss_pred EEEEEeeeCcccHHHHHHHHHHHHhcCCC-CcEEEEECCCCCHHHHHHHHHcC----cEEEEeeecCCCCchh-hh-hhc
Q 020230 17 AYVTFLAGNGDYVKGVVGLAKGLRKAKSE-YPLVVAILPDVPEDHRQILESQG----CIVREIEPVYPPENQT-EF-AMA 89 (329)
Q Consensus 17 a~vT~l~~d~~Y~~~a~vli~SL~~~~~~-~~i~vlv~~~ls~~~~~~L~~~~----~~i~~v~~~~~~~~~~-~~-~~~ 89 (329)
++++ +|+|++|++++.|+++||++++++ +.++ +++++++++.++.|++.. ..+ ++..+..+.... .. ...
T Consensus 2 ~i~~-~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~-il~~~is~~~~~~L~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~ 78 (246)
T cd00505 2 AIVI-VATGDEYLRGAIVLMKSVLRHRTKPLRFH-VLTNPLSDTFKAALDNLRKLYNFNY-ELIPVDILDSVDSEHLKRP 78 (246)
T ss_pred eEEE-EecCcchhHHHHHHHHHHHHhCCCCeEEE-EEEccccHHHHHHHHHHHhccCceE-EEEeccccCcchhhhhcCc
Confidence 5676 567889999999999999999875 3444 456889999999998742 222 122222221111 11 123
Q ss_pred cccccccceecccccc-cceeEEEecceeeccCchhhhCCC--CCceeeeechhccCCCCCCCCccccccccCCCccCCC
Q 020230 90 YYVINYSKLRIWEFVE-YEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWP 166 (329)
Q Consensus 90 ~~~~~y~KL~i~~L~~-ydrVLYLDaD~lv~~dl~eLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p 166 (329)
++..+|+||++|++++ ++||||||+|+||++||++||+++ +..+|||+|+..... .. .+ .
T Consensus 79 ~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~-~~--~~--------------~ 141 (246)
T cd00505 79 IKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRRE-GK--YY--------------R 141 (246)
T ss_pred cccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhc-cc--hh--------------h
Confidence 4678999999999876 999999999999999999999996 357999998642110 00 00 0
Q ss_pred cccCCC-CCCcccceEEEEecChHhHHHHHHHHhc-----CCCCCCCChHHHHHHhcCc---eeecCCCCCcchhhhhhc
Q 020230 167 VEMGSP-PPLYFNAGMFVYEPNLLTYHDLLETVKV-----TPPTIFAEQDFLNMYFKDI---YKPIPPTYNLVVAMLWRH 237 (329)
Q Consensus 167 ~~lg~~-~~~yfNsGVmlin~~~~~~~~ll~~~~~-----~~~~~~~DQdiLN~~f~~~---~~~Lp~~yN~~~~~~~~~ 237 (329)
..++.. ...||||||||+|+++++++++++.+.+ ..+..++|||+||.+|.++ +..||.+||++....+..
T Consensus 142 ~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~ 221 (246)
T cd00505 142 QKRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRS 221 (246)
T ss_pred cccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCcccc
Confidence 011111 2479999999999999987777654322 2346789999999999998 999999999987543322
Q ss_pred cccC--CCCCeEEEEeeCCCCCCCcc
Q 020230 238 LENV--DVDKVKVVHYCAAGSKPWRF 261 (329)
Q Consensus 238 ~~~~--~~~~~~IiHf~g~~~KPW~~ 261 (329)
.... ...+++||||+| ..|||+.
T Consensus 222 ~~~~~~~~~~~~iiHy~g-~~KPW~~ 246 (246)
T cd00505 222 LNCFKAFVKNAKVIHFNG-PTKPWNK 246 (246)
T ss_pred ccchhhhcCCCEEEEeCC-CCCCCCC
Confidence 1111 267999999999 7999973
No 4
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=6.6e-39 Score=301.82 Aligned_cols=260 Identities=17% Similarity=0.251 Sum_probs=177.1
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEE-EECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhhhh-
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVV-AILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEFA- 87 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~v-lv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~~- 87 (329)
....+| +++|++|+++++|++.||+.++++.++.+ ++++++++++++.|+++ +..+. +..++.. ....+.
T Consensus 24 ~~i~Iv--~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~-~~~id~~-~~~~~~~ 99 (334)
T PRK15171 24 NSLDIA--YGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRIN-IYLINCE-RLKSLPS 99 (334)
T ss_pred CceeEE--EECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEE-EEEeCHH-HHhCCcc
Confidence 344444 78899999999999999999887654432 45688999998887764 33332 2222211 011111
Q ss_pred -hccccccccceeccccc--ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCc
Q 020230 88 -MAYYVINYSKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEK 162 (329)
Q Consensus 88 -~~~~~~~y~KL~i~~L~--~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~ 162 (329)
..++.++|+||++|+++ ++|||||||||+||++||++||+++. +.+|||.+......+. .. ..+
T Consensus 100 ~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~-------~~----~~~ 168 (334)
T PRK15171 100 TKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWS-------KR----AQS 168 (334)
T ss_pred cCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHH-------HH----HHh
Confidence 13467899999999975 59999999999999999999999963 5688774321000000 00 001
Q ss_pred cCCCcccCCCCCCcccceEEEEecChHhHHHH----HHHHhcC---CCCCCCChHHHHHHhcCceeecCCCCCcchhhhh
Q 020230 163 VQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVT---PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLW 235 (329)
Q Consensus 163 ~~~p~~lg~~~~~yfNsGVmlin~~~~~~~~l----l~~~~~~---~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~ 235 (329)
.+.| +. ...||||||||||+++|+.+++ ++.+.+. ..+.++|||+||.+|.++|..||.+||++....+
T Consensus 169 l~~~---~~-~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~ 244 (334)
T PRK15171 169 LQTP---GL-ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNY 244 (334)
T ss_pred cCCc---cc-cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhH
Confidence 1111 10 1369999999999999876654 4444432 2467899999999999999999999999865432
Q ss_pred hcccc---CCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhccccccccccCCcCCCc
Q 020230 236 RHLEN---VDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDESLDYKNFIVPATTNS 302 (329)
Q Consensus 236 ~~~~~---~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~~~~~~~~~~~~~~~~ 302 (329)
...+. ....+|+||||+| ..|||+... .+++.+.||+|+..++.+-.....|.+.+.
T Consensus 245 ~~~~~~~~~~~~~p~IIHy~G-~~KPW~~~~---------~~~~~~~f~~~~~~spw~~~~~~~~~~~~~ 304 (334)
T PRK15171 245 ELKDSVINPVNDETVFIHYIG-PTKPWHSWA---------DYPVSQYFLKAKEASPWKNEALLKPVNSNQ 304 (334)
T ss_pred HHHhcccccccCCCEEEEECC-CCCCCCCCC---------CCchHHHHHHHHhcCCCCCccccCCCCHHH
Confidence 21111 1145899999999 899998643 257789999999986655455555555433
No 5
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=3.9e-37 Score=280.09 Aligned_cols=230 Identities=25% Similarity=0.398 Sum_probs=173.2
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHH-------HHHcCcEEEEeeecCCCCchhhhhh
Q 020230 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQI-------LESQGCIVREIEPVYPPENQTEFAM 88 (329)
Q Consensus 16 ~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~-------L~~~~~~i~~v~~~~~~~~~~~~~~ 88 (329)
+||||++ +++.|++||+++.+||+++++.+++|+|++++++...... +...+..+..|+.+..+. ..
T Consensus 1 fAYvtl~-Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~-----~~ 74 (278)
T cd06914 1 YAYVNYA-TNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG-----GD 74 (278)
T ss_pred CeEEEEe-cChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC-----CC
Confidence 5999965 6999999999999999999999999999999987654332 223355555555433322 12
Q ss_pred ccccccccceecccccccceeEEEecceeeccCchhhhCCCC-CceeeeechhccCCCCCCCCccccccccCCCccCCCc
Q 020230 89 AYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPD-GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (329)
Q Consensus 89 ~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~-~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 167 (329)
..+..+|+||.+|++.+||||||||||++|+++|++||+++. ..+||+ + .+
T Consensus 75 ~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap-~------------------------~~--- 126 (278)
T cd06914 75 AYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAP-R------------------------AY--- 126 (278)
T ss_pred ccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeee-c------------------------Cc---
Confidence 233456999999999999999999999999999999999973 334443 1 01
Q ss_pred ccCCCCCCcccceEEEEecChHhHHHHHHHHhcCC--CCCCCChHHHHHHhcCc-------eeecCCC-CCcchhhhhhc
Q 020230 168 EMGSPPPLYFNAGMFVYEPNLLTYHDLLETVKVTP--PTIFAEQDFLNMYFKDI-------YKPIPPT-YNLVVAMLWRH 237 (329)
Q Consensus 168 ~lg~~~~~yfNsGVmlin~~~~~~~~ll~~~~~~~--~~~~~DQdiLN~~f~~~-------~~~Lp~~-yN~~~~~~~~~ 237 (329)
.|||||||||+|+.++++++++.+.+.. +..++|||+||.+|.++ +..||.+ ||+..+.+...
T Consensus 127 -------~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 127 -------WKFASHLMVIKPSKEAFKELMTEILPAYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred -------ceecceeEEEeCCHHHHHHHHHHHHHhcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 3899999999999999999999887542 23679999999999999 9999996 99988643211
Q ss_pred ------------cccCC----CCCeEEEEeeCC-CCCCCccCCCC---------CCC---CchhhHHHHHHHHHHHhc
Q 020230 238 ------------LENVD----VDKVKVVHYCAA-GSKPWRFTGKE---------ENM---DRTDIKLLVKKWWDIYED 286 (329)
Q Consensus 238 ------------~~~~~----~~~~~IiHf~g~-~~KPW~~~~~~---------~~~---~~~~~~~~~~~Ww~y~~~ 286 (329)
.+.|+ ..+.++|||+.+ -+|||...+.+ |.. ..+..+..+++|+..|++
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~iW~~~y~~ 277 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNNLEDIYCIEKIYCKMVKPRLEDDCRACDLWNSLYAD 277 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcCHHHHHHhCCccccCCCCCccCcchHHHHHHHHhhc
Confidence 12232 368999999983 26999986431 111 112346789999999875
No 6
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=2.4e-36 Score=274.16 Aligned_cols=219 Identities=25% Similarity=0.378 Sum_probs=158.0
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCC--CcEEEEECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhh--hhhccccc
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAKSE--YPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTE--FAMAYYVI 93 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~~~--~~i~vlv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~--~~~~~~~~ 93 (329)
+++|++|+++++|++.||+++++. ++|+ +++++++++.++.|++. +..+.. ..++.+..... ....++..
T Consensus 5 ~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~-il~~~is~~~~~~L~~~~~~~~~~i~~-~~i~~~~~~~~~~~~~~~~~~ 82 (248)
T cd04194 5 FAIDDNYAPYLAVTIKSILANNSKRDYDFY-ILNDDISEENKKKLKELLKKYNSSIEF-IKIDNDDFKFFPATTDHISYA 82 (248)
T ss_pred EEecHhhHHHHHHHHHHHHhcCCCCceEEE-EEeCCCCHHHHHHHHHHHHhcCCeEEE-EEcCHHHHhcCCcccccccHH
Confidence 668999999999999999999884 4455 44678999999999886 333322 22222110000 11234567
Q ss_pred cccceecccccc-cceeEEEecceeeccCchhhhCCC--CCceeeeechhccCCCCCCCCccccccccCCCccCCCcccC
Q 020230 94 NYSKLRIWEFVE-YEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMG 170 (329)
Q Consensus 94 ~y~KL~i~~L~~-ydrVLYLDaD~lv~~dl~eLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg 170 (329)
+|+||+++++.+ ++||||||+|++|++||++||+++ +..+||++|+.......+ .. ...+
T Consensus 83 ~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~--------------~~---~~~~ 145 (248)
T cd04194 83 TYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKR--------------KR---RLGG 145 (248)
T ss_pred HHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHH--------------Hh---hcCC
Confidence 899999999874 999999999999999999999985 357899998643210000 00 0011
Q ss_pred CCCCCcccceEEEEecChHhHH----HHHHHHhcCC-CCCCCChHHHHHHhcCceeecCCCCCcchhhhhhccc------
Q 020230 171 SPPPLYFNAGMFVYEPNLLTYH----DLLETVKVTP-PTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLE------ 239 (329)
Q Consensus 171 ~~~~~yfNsGVmlin~~~~~~~----~ll~~~~~~~-~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~------ 239 (329)
.....||||||||+|++.|+.+ ++++.++++. ...++|||+||.+|.++|..||.+||++.........
T Consensus 146 ~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~ 225 (248)
T cd04194 146 YDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQ 225 (248)
T ss_pred CcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhHH
Confidence 1235799999999999997654 5555565543 3678999999999999999999999999865432211
Q ss_pred --cCCCCCeEEEEeeCCCCCCCc
Q 020230 240 --NVDVDKVKVVHYCAAGSKPWR 260 (329)
Q Consensus 240 --~~~~~~~~IiHf~g~~~KPW~ 260 (329)
....++++||||+| ..|||+
T Consensus 226 ~~~~~~~~~~iiHf~g-~~KPW~ 247 (248)
T cd04194 226 ELEEARKNPVIIHYTG-SDKPWN 247 (248)
T ss_pred HHHHHhcCCEEEEeCC-CCCCCC
Confidence 12367899999999 799997
No 7
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=6.3e-36 Score=277.18 Aligned_cols=222 Identities=21% Similarity=0.346 Sum_probs=164.0
Q ss_pred eeeCcccHHHHHHHHHHHHhcCC--CCcEEEEECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhhh---hhcccc
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAKS--EYPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEF---AMAYYV 92 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~~--~~~i~vlv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~---~~~~~~ 92 (329)
+++|.+|+.|++|+++||+.|++ .+.|+++ .+++++|+.++|++. +..+. +..++... ...+ ..+++.
T Consensus 7 ~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil-~~~i~~e~~~~l~~~~~~f~~~i~-~~~id~~~-~~~~~~~~~~~s~ 83 (325)
T COG1442 7 FAFDKNYLIPAGVSIYSLLEHNRKIFYKFHIL-VDGLNEEDKKKLNETAEPFKSFIV-LEVIDIEP-FLDYPPFTKRFSK 83 (325)
T ss_pred EEcccccchhHHHHHHHHHHhCccccEEEEEE-ecCCCHHHHHHHHHHHHhhcccee-eEEEechh-hhcccccccchHH
Confidence 67899999999999999999998 6778865 589999999888874 33222 22222111 1111 234567
Q ss_pred ccccceeccccc-ccceeEEEecceeeccCchhhhCCC--CCceeeeechhccCCCCCCCCccccccccCCCccCCCccc
Q 020230 93 INYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEM 169 (329)
Q Consensus 93 ~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~l 169 (329)
.+|.|++++++. ++||+||||+|+||+++|++||+++ +.++|||.|........+ ..+ ...
T Consensus 84 ~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~------------~~~----~~~ 147 (325)
T COG1442 84 MVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEG------------ALR----LEK 147 (325)
T ss_pred HHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhh------------hhH----hhh
Confidence 899999999985 7899999999999999999999995 357999999743110000 000 011
Q ss_pred CCCCCCcccceEEEEecChHhHHHH----HHHHhcC-CCCCCCChHHHHHHhcCceeecCCCCCcchhhhhhccc---cC
Q 020230 170 GSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVT-PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLE---NV 241 (329)
Q Consensus 170 g~~~~~yfNsGVmlin~~~~~~~~l----l~~~~~~-~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~---~~ 241 (329)
+.....|||||||++|++.|+.+++ ++.+.+. +.+.++|||+||.+|+++|..||.+||++......... ..
T Consensus 148 ~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~ 227 (325)
T COG1442 148 GDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIYP 227 (325)
T ss_pred cccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhhcc
Confidence 2223589999999999999986655 4444433 35788999999999999999999999999876543222 22
Q ss_pred CCCCeEEEEeeCCCCCCCccCC
Q 020230 242 DVDKVKVVHYCAAGSKPWRFTG 263 (329)
Q Consensus 242 ~~~~~~IiHf~g~~~KPW~~~~ 263 (329)
...++.|+||+| ..|||+..+
T Consensus 228 ~~~~~~iiHy~g-~~KPW~~~~ 248 (325)
T COG1442 228 FGDDPVILHYAG-PTKPWHSDS 248 (325)
T ss_pred CCCCceEEEecC-CCCCCcCcc
Confidence 367899999999 789999875
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2.2e-35 Score=271.16 Aligned_cols=240 Identities=21% Similarity=0.229 Sum_probs=159.4
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCC-CcEEEEECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhhh---h
Q 020230 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSE-YPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEF---A 87 (329)
Q Consensus 16 ~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~-~~i~vlv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~---~ 87 (329)
.|+| +++ .+|++++.|+++||+.++.. +.++ ++++++++++++.|.+. ++++.. ....+....+ .
T Consensus 3 ~~iv--~~~-~~y~~~~~~~i~Sil~n~~~~~~fh-ii~d~~s~~~~~~l~~~~~~~~~~i~f---~~i~~~~~~~~~~~ 75 (280)
T cd06431 3 VAIV--CAG-YNASRDVVTLVKSVLFYRRNPLHFH-LITDEIARRILATLFQTWMVPAVEVSF---YNAEELKSRVSWIP 75 (280)
T ss_pred EEEE--Ecc-CCcHHHHHHHHHHHHHcCCCCEEEE-EEECCcCHHHHHHHHHhccccCcEEEE---EEhHHhhhhhccCc
Confidence 4555 556 99999999999999998642 4455 45788999998888753 333332 2221100111 1
Q ss_pred -hccccc-cccceeccccc--ccceeEEEecceeeccCchhhhCC--C--CC-ceeeeechhccCCCCCCCCcccccccc
Q 020230 88 -MAYYVI-NYSKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDA--P--DG-YFYAVMDCFCEKTWSNSPQFTIGYCQQ 158 (329)
Q Consensus 88 -~~~~~~-~y~KL~i~~L~--~ydrVLYLDaD~lv~~dl~eLf~~--~--~~-~iaAv~d~~~~~~~~~~~~~~~~~~~~ 158 (329)
.+++.. +|.||++|+++ ++|||||||||+||++||++||++ + +. .+||+.|. ...+ .....
T Consensus 76 ~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~-~~~~--------~~~~~- 145 (280)
T cd06431 76 NKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQ-SDWY--------LGNLW- 145 (280)
T ss_pred ccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccc-hhhh--------hhhhh-
Confidence 122222 56899999976 499999999999999999999987 2 23 34555442 1000 00000
Q ss_pred CCCccCCCcccCCCCCCcccceEEEEecChHhHHHHHHHH----hc----CCCCCCCChHHHHHHhcCc---eeecCCCC
Q 020230 159 CPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDLLETV----KV----TPPTIFAEQDFLNMYFKDI---YKPIPPTY 227 (329)
Q Consensus 159 ~p~~~~~p~~lg~~~~~yfNsGVmlin~~~~~~~~ll~~~----~~----~~~~~~~DQdiLN~~f~~~---~~~Lp~~y 227 (329)
.....|+ .+ ..||||||||||+++|+.+++.+.+ ++ ..+..++|||+||.+|.++ +..||.+|
T Consensus 146 -~~~~~~~-~~----~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~w 219 (280)
T cd06431 146 -KNHRPWP-AL----GRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAW 219 (280)
T ss_pred -hccCCCc-cc----ccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCcc
Confidence 0000111 11 2599999999999998866554433 22 2346789999999999999 88999999
Q ss_pred CcchhhhhhccccC-CCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 228 NLVVAMLWRHLENV-DVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 228 N~~~~~~~~~~~~~-~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
|++..........+ ...+|+||||+| +.|||....+ ..++++.|-.|.+.+
T Consensus 220 N~~~~~~~~~~~~~~~~~~p~IIHf~g-~~KPW~~~~~--------~~~~~~~~~~~~~~~ 271 (280)
T cd06431 220 NVQLSDHTRSEQCYRDVSDLKVIHWNS-PKKLRVKNKH--------VEFFRNLYLTFLEYD 271 (280)
T ss_pred ccccCccchHhHhhcCcCCCEEEEeCC-CCCCCCcCCC--------ChHHHHHHHHHHhcC
Confidence 99864321111111 256899999999 8999986642 268999999998754
No 9
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=4.6e-35 Score=265.52 Aligned_cols=213 Identities=15% Similarity=0.195 Sum_probs=148.3
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCC-CcEEE-EECCCCCHHHHHHHHHc----CcEEEEeeecCCCC--ch-h--------
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAKSE-YPLVV-AILPDVPEDHRQILESQ----GCIVREIEPVYPPE--NQ-T-------- 84 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~~~-~~i~v-lv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~--~~-~-------- 84 (329)
+++| +|+. +++++.|+..++++ .++++ +++++++.+..+.+... +..+ .+..++... .. .
T Consensus 5 ~~~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~~~~ 81 (257)
T cd06429 5 IFSD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATV-KVLNFDDFKLLGKVKVDSLMQLE 81 (257)
T ss_pred EEec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceE-EEEEeCcHHhhcccccchhhhhh
Confidence 3467 9995 55666666666644 55543 56888998887777653 3332 222221100 00 0
Q ss_pred --------hhh--hccccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCc
Q 020230 85 --------EFA--MAYYVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQF 151 (329)
Q Consensus 85 --------~~~--~~~~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~ 151 (329)
+.. ...+..+|+||++|++. +++||||||||+||++||++||+++. ..+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~-------------- 147 (257)
T cd06429 82 SEADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVE-------------- 147 (257)
T ss_pred ccccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEh--------------
Confidence 000 12356789999999975 68999999999999999999999964 3466653
Q ss_pred cccccccCCCccCCCcccCCCCCCcccceEEEEecChHhHHHH----HHHHhcCC-C----CCCCChHHHHHHhcCceee
Q 020230 152 TIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVTP-P----TIFAEQDFLNMYFKDIYKP 222 (329)
Q Consensus 152 ~~~~~~~~p~~~~~p~~lg~~~~~yfNsGVmlin~~~~~~~~l----l~~~~~~~-~----~~~~DQdiLN~~f~~~~~~ 222 (329)
+||||||||+|+++|+.+++ ++.++... . ..++|||+||.+|.+++..
T Consensus 148 -----------------------dyfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~ 204 (257)
T cd06429 148 -----------------------TSWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSP 204 (257)
T ss_pred -----------------------hhcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEE
Confidence 27999999999999886554 44444332 1 3458999999999999999
Q ss_pred cCCCCCcchhhhhhcc-ccCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHh
Q 020230 223 IPPTYNLVVAMLWRHL-ENVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYE 285 (329)
Q Consensus 223 Lp~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~ 285 (329)
||.+||++. ..+... ......+++||||+| ..|||+..+ ..++++.||+|+.
T Consensus 205 L~~~wN~~~-l~~~~~~~~~~~~~~~IIHy~G-~~KPW~~~~---------~~~~~~~w~~yl~ 257 (257)
T cd06429 205 LDPSWHVRG-LGYNYGIRPQDIKAAAVLHFNG-NMKPWLRTA---------IPSYKELWEKYLS 257 (257)
T ss_pred CChHHcccC-CcccccccccccCCcEEEEECC-CCCCcCCCC---------CChHHHHHHHHhC
Confidence 999999973 222211 011246899999999 899999765 3578999999963
No 10
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=5.7e-35 Score=263.31 Aligned_cols=225 Identities=27% Similarity=0.436 Sum_probs=150.1
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCC-CcE-EEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCch--------hhhhhccc
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAKSE-YPL-VVAILPDVPEDHRQILESQGCIVREIEPVYPPENQ--------TEFAMAYY 91 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~~~-~~i-~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~--------~~~~~~~~ 91 (329)
+++|++|+.+++|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+...... ......++
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFS 83 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGG
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccccc
Confidence 668999999999999999999885 455 34567899999999999877654322211111110 11112345
Q ss_pred cccccceecccc-cccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCC-CCCCCCccccccccCCCccCCCc
Q 020230 92 VINYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKT-WSNSPQFTIGYCQQCPEKVQWPV 167 (329)
Q Consensus 92 ~~~y~KL~i~~L-~~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~-~~~~~~~~~~~~~~~p~~~~~p~ 167 (329)
..+|.||+++++ .++|||||||+|++|++||++||+++. ..+||+.|...... +.... . ..
T Consensus 84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~----------~-----~~ 148 (250)
T PF01501_consen 84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFP----------F-----SE 148 (250)
T ss_dssp GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTS----------S-----EE
T ss_pred HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccc----------h-----hh
Confidence 788999999998 799999999999999999999999753 46888877211100 00000 0 00
Q ss_pred ccCCCCCCcccceEEEEecChHhHHHHHHHHh----cC-CCCCCCChHHHHHHhcCceeecCCCCCcchhhh-hhccc-c
Q 020230 168 EMGSPPPLYFNAGMFVYEPNLLTYHDLLETVK----VT-PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAML-WRHLE-N 240 (329)
Q Consensus 168 ~lg~~~~~yfNsGVmlin~~~~~~~~ll~~~~----~~-~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~-~~~~~-~ 240 (329)
........|||||||++|++.++.+++.+.+. .. ....++||++||.+|.+++..||.+||++.... +.... .
T Consensus 149 ~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~~~~~ 228 (250)
T PF01501_consen 149 RKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSDDYFN 228 (250)
T ss_dssp ECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTHHHHH
T ss_pred cccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccchhhH
Confidence 11112358999999999999988777655543 22 246789999999999999999999999998654 11111 1
Q ss_pred CCCCCeEEEEeeCCCCCCCccC
Q 020230 241 VDVDKVKVVHYCAAGSKPWRFT 262 (329)
Q Consensus 241 ~~~~~~~IiHf~g~~~KPW~~~ 262 (329)
...++++||||+| ..|||...
T Consensus 229 ~~~~~~~iiHy~g-~~KPW~~~ 249 (250)
T PF01501_consen 229 PILEDAKIIHYSG-PPKPWKST 249 (250)
T ss_dssp HHGCC-SEEE--S-SS-TTSTT
T ss_pred hhcCCeEEEEeCC-CCcCCCCC
Confidence 1267999999999 89999864
No 11
>PLN02523 galacturonosyltransferase
Probab=99.96 E-value=1.2e-29 Score=244.33 Aligned_cols=253 Identities=15% Similarity=0.263 Sum_probs=163.3
Q ss_pred CCCCCeEEEEEeeeCcccHHHHHHHHHHHHhc-CCCCcEE-EEECCCCCHHHHHHHHHc----C--cEEEEeee---cCC
Q 020230 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLV-VAILPDVPEDHRQILESQ----G--CIVREIEP---VYP 79 (329)
Q Consensus 11 ~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~~~~i~-vlv~~~ls~~~~~~L~~~----~--~~i~~v~~---~~~ 79 (329)
...+-.=||. .+|. +.++.|.+.|+..+ ++...++ .++|++++...++.+-.. + +++..|+. +..
T Consensus 244 ~dp~l~Hy~i--fSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~ 319 (559)
T PLN02523 244 EDPSLYHYAI--FSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNS 319 (559)
T ss_pred cCCCcceEEE--ecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhccc
Confidence 3344455663 3444 99999999999987 4443443 267899998776655432 2 23344442 110
Q ss_pred ---C-----Cch------------------hhhh--hc--cccccccceeccccc-ccceeEEEecceeeccCchhhhCC
Q 020230 80 ---P-----ENQ------------------TEFA--MA--YYVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDA 128 (329)
Q Consensus 80 ---~-----~~~------------------~~~~--~~--~~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~ 128 (329)
+ +.. ..++ .+ .+..+|.||++|++. +++||||||+|+||++||++||++
T Consensus 320 ~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~i 399 (559)
T PLN02523 320 SYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKI 399 (559)
T ss_pred ccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhC
Confidence 0 000 0000 00 235678999999975 699999999999999999999998
Q ss_pred CC--CceeeeechhccCCCCCCCCccccccccCCCccCCCcccCCCCCCcccceEEEEecChHhHHHHHHHHh----cCC
Q 020230 129 PD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDLLETVK----VTP 202 (329)
Q Consensus 129 ~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg~~~~~yfNsGVmlin~~~~~~~~ll~~~~----~~~ 202 (329)
+. +.+|||.||.... ..+.++ .+. .+|. .. ..+. ...+|||+||||||+++|+.+++.+.+. .+.
T Consensus 400 DL~gkv~aAVeDc~~~~--~r~~~~-ln~--s~p~-i~--~yFN-s~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~ 470 (559)
T PLN02523 400 DMDGKVNGAVETCFGSF--HRYAQY-LNF--SHPL-IK--EKFN-PKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNE 470 (559)
T ss_pred cCCCceEEEehhhhhHH--HHHHHh-hcc--cchh-hh--hCcC-CCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcc
Confidence 63 5689999874210 000000 000 0010 00 0010 1246777799999999999887766543 123
Q ss_pred CCCCCChHHHH---HHhcCceeecCCCCCcchhhhhhcc-ccCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHH
Q 020230 203 PTIFAEQDFLN---MYFKDIYKPIPPTYNLVVAMLWRHL-ENVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVK 278 (329)
Q Consensus 203 ~~~~~DQdiLN---~~f~~~~~~Lp~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~ 278 (329)
+..+.|||+|| .+|.+++..||.+||+... .+... ..-..++++||||+| ..|||...+ ..++++
T Consensus 471 ~~~l~DqdaLpp~LivF~gri~~LD~rWNvlgl-Gy~~~i~~~~i~~paIIHYnG-~~KPWle~~---------i~~yr~ 539 (559)
T PLN02523 471 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGL-GYNPSISMDEIRNAAVIHFNG-NMKPWLDIA---------MNQFKP 539 (559)
T ss_pred ccccccccccchHHHHhcCceEecCchhhccCC-ccCCCccccccCCCEEEEECC-CCCccccCC---------CCcchH
Confidence 45789999995 8999999999999998652 22111 011257899999999 899998765 357899
Q ss_pred HHHHHHhcc
Q 020230 279 KWWDIYEDE 287 (329)
Q Consensus 279 ~Ww~y~~~~ 287 (329)
+||+|+..+
T Consensus 540 ~W~kYl~~~ 548 (559)
T PLN02523 540 LWTKYVDYD 548 (559)
T ss_pred HHHHHHccC
Confidence 999997654
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.96 E-value=5.5e-29 Score=228.40 Aligned_cols=216 Identities=13% Similarity=0.178 Sum_probs=141.8
Q ss_pred EEeeeCcccHHHHHHHHHHHHhcCC-CCcEEEEECCC-CCHHHHHHHHHc---CcEEE--EeeecCCCCc-hhhhhhccc
Q 020230 20 TFLAGNGDYVKGVVGLAKGLRKAKS-EYPLVVAILPD-VPEDHRQILESQ---GCIVR--EIEPVYPPEN-QTEFAMAYY 91 (329)
Q Consensus 20 T~l~~d~~Y~~~a~vli~SL~~~~~-~~~i~vlv~~~-ls~~~~~~L~~~---~~~i~--~v~~~~~~~~-~~~~~~~~~ 91 (329)
++++++++ +..+.++++|++.++. ...++++ +++ ++++.+++|++. +...+ .+.++..|.. ...+..-..
T Consensus 4 ~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~-~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 4 AVVACGER-LEETLTMLKSAIVFSQKPLRFHIF-AEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEE-ECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 34456666 8999999999988763 3344544 555 788887778775 22222 4444444422 112221112
Q ss_pred cccccceeccccc-ccceeEEEecceeeccCchhhhCC--C--CCceeee-echhccCCCCCCCCccccccccCCCccCC
Q 020230 92 VINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDA--P--DGYFYAV-MDCFCEKTWSNSPQFTIGYCQQCPEKVQW 165 (329)
Q Consensus 92 ~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~--~--~~~iaAv-~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 165 (329)
..+|.||++|+++ ++|||||||+|+||++||++||++ + +..+||+ +|... . ..+|
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~-~------------------~~~~ 142 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEE-P------------------NIGW 142 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccc-c------------------chhh
Confidence 4789999999975 689999999999999999999987 4 2345554 44210 0 0111
Q ss_pred Cc---ccCCCCCCcccceEEEEecChHhH---------------HHHHHHHhcCC-CCCCCChHHHHHHhcCc---eeec
Q 020230 166 PV---EMGSPPPLYFNAGMFVYEPNLLTY---------------HDLLETVKVTP-PTIFAEQDFLNMYFKDI---YKPI 223 (329)
Q Consensus 166 p~---~lg~~~~~yfNsGVmlin~~~~~~---------------~~ll~~~~~~~-~~~~~DQdiLN~~f~~~---~~~L 223 (329)
.. ..+.....+||||||+||+++|+. +++++.++++. ++.++|||+||.+|.++ ++.|
T Consensus 143 ~~~~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~L 222 (304)
T cd06430 143 YNRFARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVF 222 (304)
T ss_pred hhhhcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEc
Confidence 10 011111257999999999999875 23555666553 57899999999999987 8999
Q ss_pred CCCCCcchhhh-hh-ccccCCCCCeEEEEeeCCCCC
Q 020230 224 PPTYNLVVAML-WR-HLENVDVDKVKVVHYCAAGSK 257 (329)
Q Consensus 224 p~~yN~~~~~~-~~-~~~~~~~~~~~IiHf~g~~~K 257 (329)
|.+||++...- |. .+..-+.+.++|||+.+ +.|
T Consensus 223 p~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~-~~~ 257 (304)
T cd06430 223 PCHWNYRPDHCMYGSNCKAAEEEGVFILHGNR-GVY 257 (304)
T ss_pred CccccCCccceeecccccccccccceEEEcCC-CCC
Confidence 99999877431 11 11111357899999997 455
No 13
>PLN02718 Probable galacturonosyltransferase
Probab=99.96 E-value=5.7e-29 Score=242.37 Aligned_cols=252 Identities=13% Similarity=0.184 Sum_probs=164.2
Q ss_pred CCCCeEEEEEeeeCcccHHHHHHHHHHHHhc--CCCCcEEE-EECCCCCHHHHHHHHHcC----cE--EEEeeecC-CCC
Q 020230 12 NVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA--KSEYPLVV-AILPDVPEDHRQILESQG----CI--VREIEPVY-PPE 81 (329)
Q Consensus 12 ~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~--~~~~~i~v-lv~~~ls~~~~~~L~~~~----~~--i~~v~~~~-~~~ 81 (329)
.++-.=|| +. .|+| .+++|++.|+..+ ++. .+++ +++++++.+.++.+.... +. +..++... .+.
T Consensus 310 d~~~~Hia--~~-sDNv-laasVvInSil~Ns~np~-~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~ 384 (603)
T PLN02718 310 DPDLYHYV--VF-SDNV-LACSVVVNSTISSSKEPE-KIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPA 384 (603)
T ss_pred CCcceeEE--EE-cCCc-eeEEEEhhhhhhccCCCC-cEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccc
Confidence 34445555 43 4557 4899999999987 333 4432 568899999888766542 22 22332111 111
Q ss_pred c----hhhhh----hccccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCC-CCCC
Q 020230 82 N----QTEFA----MAYYVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTW-SNSP 149 (329)
Q Consensus 82 ~----~~~~~----~~~~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~-~~~~ 149 (329)
. ...+. ...+..+|+||++|++. +++||||||+|+||.+||++||+++. ..+|||.||...... ....
T Consensus 385 ~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~ 464 (603)
T PLN02718 385 DYNSLLMKQNSHDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMD 464 (603)
T ss_pred cchhhhhhccccccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhh
Confidence 0 00111 12346789999999975 69999999999999999999999863 468899987432100 0000
Q ss_pred CccccccccCCCccCCCcccCCCCCCcccceEEEEecChHhHHHHH----HHHhcCCCCCCCChHHHH---HHhcCceee
Q 020230 150 QFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDLL----ETVKVTPPTIFAEQDFLN---MYFKDIYKP 222 (329)
Q Consensus 150 ~~~~~~~~~~p~~~~~p~~lg~~~~~yfNsGVmlin~~~~~~~~ll----~~~~~~~~~~~~DQdiLN---~~f~~~~~~ 222 (329)
.+ +++. .|-.. +.+ .+..+|||+||||||+++|+.+++. ++++.+....+.|||.|| .+|.+++..
T Consensus 465 ~~-lnfs--~p~i~---~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~ 537 (603)
T PLN02718 465 TF-INFS--DPWVA---KKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVA 537 (603)
T ss_pred hh-hhcc--chhhh---ccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceee
Confidence 00 1110 01000 011 1135899999999999999876554 444444334678999997 899999999
Q ss_pred cCCCCCcchhhhhhcc-ccCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhc
Q 020230 223 IPPTYNLVVAMLWRHL-ENVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYED 286 (329)
Q Consensus 223 Lp~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~ 286 (329)
||++||... ..+... .....++++||||+| ..|||...+ ...|+++|-.|.+.
T Consensus 538 LD~rWNv~g-LG~~~~i~~~~i~~aaIIHYnG-~~KPWle~~---------i~~yr~~W~k~v~~ 591 (603)
T PLN02718 538 LDKRWHVLG-LGHESGVGASDIEQAAVIHYDG-VMKPWLDIG---------IGKYKRYWNIHVPY 591 (603)
T ss_pred cChHHhccC-ccccccccccccCCCEEEEECC-CCCccccCC---------hhhHHHHHHhhcCC
Confidence 999999876 322211 111367899999999 899999876 46889999988554
No 14
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.95 E-value=3.5e-28 Score=220.12 Aligned_cols=214 Identities=15% Similarity=0.197 Sum_probs=141.3
Q ss_pred eeeCcccHHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhhhhh-ccccccc
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEFAM-AYYVINY 95 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~~-~~~i~vlv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~~~-~~~~~~y 95 (329)
+++++.|+++++|++.||+.++. .+.+++ +++++|++.++.|++. +..+..+. ++.+.....+.. .....+|
T Consensus 6 ~~~~~~y~~~~~v~l~Sll~nn~~~~~fyi-l~~~is~e~~~~l~~~~~~~~~~i~~i~-i~~~~~~~~~~~~~~~~~~y 83 (248)
T cd06432 6 VASGHLYERFLRIMMLSVMKNTKSPVKFWF-IKNFLSPQFKEFLPEMAKEYGFEYELVT-YKWPRWLHKQTEKQRIIWGY 83 (248)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCCCEEEEE-EeCCCCHHHHHHHHHHHHHhCCceEEEE-ecChhhhhcccccchhHHHH
Confidence 36799999999999999999864 455554 4578999998888763 44332222 221111000000 1112357
Q ss_pred cceeccccc--ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCc-cccccccCCCccCCCcccC
Q 020230 96 SKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQF-TIGYCQQCPEKVQWPVEMG 170 (329)
Q Consensus 96 ~KL~i~~L~--~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~-~~~~~~~~p~~~~~p~~lg 170 (329)
.||.+.+++ ++|||||||+|+||.+||++||+++. ..+|||+|+...... ....+ ..++ |...+
T Consensus 84 ~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~-~~~~~~~~~~---------~~~~l- 152 (248)
T cd06432 84 KILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEM-DGFRFWKQGY---------WKSHL- 152 (248)
T ss_pred HHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhc-ccchhhhhhh---------hhhhc-
Confidence 788777654 48999999999999999999999964 468888875211000 00000 0000 00011
Q ss_pred CCCCCcccceEEEEecChHhHHHHHHHHh-------cC-CCCCCCChHHHHHHhcCc-eeecCCCCCcchhhhhhccccC
Q 020230 171 SPPPLYFNAGMFVYEPNLLTYHDLLETVK-------VT-PPTIFAEQDFLNMYFKDI-YKPIPPTYNLVVAMLWRHLENV 241 (329)
Q Consensus 171 ~~~~~yfNsGVmlin~~~~~~~~ll~~~~-------~~-~~~~~~DQdiLN~~f~~~-~~~Lp~~yN~~~~~~~~~~~~~ 241 (329)
....||||||||||+++|+.+++.+.+. ++ .++.++|||+||.++.++ ++.||.+||++.. |+..+
T Consensus 153 -~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~--~~~~~-- 227 (248)
T cd06432 153 -RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET--WCSDE-- 227 (248)
T ss_pred -CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH--Hhccc--
Confidence 1236999999999999998766544222 22 347789999999999885 9999999999753 43322
Q ss_pred CCCCeEEEEeeC
Q 020230 242 DVDKVKVVHYCA 253 (329)
Q Consensus 242 ~~~~~~IiHf~g 253 (329)
.++.+++|||..
T Consensus 228 ~~~~~~~~~~~~ 239 (248)
T cd06432 228 SKKKAKTIDLCN 239 (248)
T ss_pred ccCccceeeccc
Confidence 278999999975
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=99.94 E-value=1.3e-27 Score=230.55 Aligned_cols=177 Identities=19% Similarity=0.356 Sum_probs=125.5
Q ss_pred ccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCC--CC-CCCccccccccCCCccC
Q 020230 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTW--SN-SPQFTIGYCQQCPEKVQ 164 (329)
Q Consensus 91 ~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~--~~-~~~~~~~~~~~~p~~~~ 164 (329)
+..+|.||++|++. +++||||||+|+||++||++||+++. +.+|||.|..|.... ++ ...| +++ ..|. +
T Consensus 329 S~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~Y-lNf--snp~-i- 403 (535)
T PLN02867 329 SLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDY-LNF--SHPL-I- 403 (535)
T ss_pred hHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhh-ccc--cchh-h-
Confidence 45679999999975 68999999999999999999999964 569999886553210 00 0000 000 0010 0
Q ss_pred CCcccCCC-CCCcccceEEEEecChHhHHHHHHH----HhcCC--CCCCCChHHHHH---HhcCceeecCCCCCcchhhh
Q 020230 165 WPVEMGSP-PPLYFNAGMFVYEPNLLTYHDLLET----VKVTP--PTIFAEQDFLNM---YFKDIYKPIPPTYNLVVAML 234 (329)
Q Consensus 165 ~p~~lg~~-~~~yfNsGVmlin~~~~~~~~ll~~----~~~~~--~~~~~DQdiLN~---~f~~~~~~Lp~~yN~~~~~~ 234 (329)
..+.. ...||||||||||+++|+.+++.+. ++.+. ...+.|||.||. +|.++|..||.+||+. +..
T Consensus 404 ---~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~-gLg 479 (535)
T PLN02867 404 ---SSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVA-GLG 479 (535)
T ss_pred ---hccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhccc-CCC
Confidence 11222 3579999999999999988776554 44332 246789999996 8999999999999994 333
Q ss_pred hhccccC-C-CCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhc
Q 020230 235 WRHLENV-D-VDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYED 286 (329)
Q Consensus 235 ~~~~~~~-~-~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~ 286 (329)
+..+... + .++++||||+| ..|||+..+ ..+++++|-.|.+-
T Consensus 480 y~~~~~~~~~i~~paIIHYnG-~~KPW~e~~---------~~~yR~~W~kyl~~ 523 (535)
T PLN02867 480 SRPPEVPREILESAAVLHFSG-PAKPWLEIG---------FPEVRSLWYRHVNF 523 (535)
T ss_pred cccccchhhhcCCcEEEEECC-CCCcccccC---------CCchhHHHHHhcCc
Confidence 3222111 1 57899999999 899999876 46789999777543
No 16
>PLN02659 Probable galacturonosyltransferase
Probab=99.94 E-value=1.7e-27 Score=228.89 Aligned_cols=181 Identities=18% Similarity=0.284 Sum_probs=126.6
Q ss_pred ccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCcc--ccccccCCCccCC
Q 020230 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFT--IGYCQQCPEKVQW 165 (329)
Q Consensus 91 ~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~--~~~~~~~p~~~~~ 165 (329)
+..+|+||++|++. +++||||||+|+||++||++||+++. +.+|||.||..........++. ++. ..|...
T Consensus 328 S~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~--s~p~i~-- 403 (534)
T PLN02659 328 SVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNF--SHPLIA-- 403 (534)
T ss_pred eHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcc--cchhhh--
Confidence 34578999999975 69999999999999999999999964 5789999874211000000000 000 001000
Q ss_pred CcccCCCCCCcccceEEEEecChHhHHHH----HHHHhcC--CCCCCCChHHH---HHHhcCceeecCCCCCcchhhhhh
Q 020230 166 PVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVT--PPTIFAEQDFL---NMYFKDIYKPIPPTYNLVVAMLWR 236 (329)
Q Consensus 166 p~~lg~~~~~yfNsGVmlin~~~~~~~~l----l~~~~~~--~~~~~~DQdiL---N~~f~~~~~~Lp~~yN~~~~~~~~ 236 (329)
+.++. ...|||||||+||+++|+.+++ +++++++ ....+.|||+| |.+|.+++..||.+||+.. ..+.
T Consensus 404 -~yFn~-~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~g-Lg~~ 480 (534)
T PLN02659 404 -KNFDP-NECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLG-LGYQ 480 (534)
T ss_pred -hccCc-cccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecC-Cccc
Confidence 01111 2579999999999999986554 4455443 24677899999 5889999999999999854 3332
Q ss_pred ccc-cCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhccc
Q 020230 237 HLE-NVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDES 288 (329)
Q Consensus 237 ~~~-~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~~ 288 (329)
... ....++++||||+| ..|||+..+ ..+++++|-.|.+.+-
T Consensus 481 ~~~~~~~i~~paIIHYnG-~~KPW~~~~---------~~~yr~~W~kYl~~s~ 523 (534)
T PLN02659 481 ENTSLADAESAGVVHFNG-RAKPWLDIA---------FPQLRPLWAKYIDSSD 523 (534)
T ss_pred ccccccccCCcEEEEECC-CCCcccccc---------CCcchhHHHHHhccCC
Confidence 211 11257899999999 899999876 4688999999987643
No 17
>PLN02769 Probable galacturonosyltransferase
Probab=99.94 E-value=1.1e-26 Score=227.30 Aligned_cols=170 Identities=20% Similarity=0.239 Sum_probs=121.8
Q ss_pred ccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCccCCCc
Q 020230 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (329)
Q Consensus 91 ~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 167 (329)
+..+|.||+||++. +.+||||||+|+||++||++||+++. +.+|||.||... . . .+. .+ . .
T Consensus 436 S~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~r-l-~---~~~-~y-------l---~ 499 (629)
T PLN02769 436 SVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVR-L-G---QLK-NY-------L---G 499 (629)
T ss_pred cHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhh-h-h---hhh-hh-------h---c
Confidence 35678899999975 58999999999999999999999864 578999886321 0 0 000 00 0 0
Q ss_pred ccCC-CCCCcccceEEEEecChHhHHHHHH----HHhcC-----CCCCCCChHHHHHHhcCceeecCCCCCcchhhhhhc
Q 020230 168 EMGS-PPPLYFNAGMFVYEPNLLTYHDLLE----TVKVT-----PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRH 237 (329)
Q Consensus 168 ~lg~-~~~~yfNsGVmlin~~~~~~~~ll~----~~~~~-----~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~ 237 (329)
..+. +...||||||||||+++|+.+++.+ ++++. .....++|+++|.+|.+++..||.+||++.. .+..
T Consensus 500 ~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gL-G~~~ 578 (629)
T PLN02769 500 DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGL-GHDY 578 (629)
T ss_pred ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccc-cccc
Confidence 1111 1357999999999999998765443 22221 1234578888999999999999999998642 1211
Q ss_pred c-ccCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 238 L-ENVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 238 ~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
. .....++++||||+| ..|||+..+ ..+++++||.|+..+
T Consensus 579 ~i~~~~i~~paIIHYnG-~~KPW~e~~---------i~~yr~~W~kYl~~~ 619 (629)
T PLN02769 579 GIDEQAIKKAAVLHYNG-NMKPWLELG---------IPKYKKYWKRFLNRD 619 (629)
T ss_pred cccccccCCcEEEEECC-CCCCccCCC---------CChHHHHHHHHhccC
Confidence 1 011257999999999 899999765 357899999997754
No 18
>PLN02870 Probable galacturonosyltransferase
Probab=99.94 E-value=1.9e-27 Score=228.54 Aligned_cols=180 Identities=22% Similarity=0.365 Sum_probs=125.6
Q ss_pred ccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccc-cCCCccCCC
Q 020230 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQ-QCPEKVQWP 166 (329)
Q Consensus 91 ~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~-~~p~~~~~p 166 (329)
+..+|+||++|++. +.+||||||+|+||++||++||+++. +.+|||.||.....+....++. .+.. .+|.
T Consensus 327 S~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~-~YfNfs~p~----- 400 (533)
T PLN02870 327 SLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFR-NYFNFSHPL----- 400 (533)
T ss_pred CHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhh-hhcccccch-----
Confidence 45678999999975 69999999999999999999999964 5789999874321100000010 0000 1111
Q ss_pred cccCCC-CCCcccceEEEEecChHhHHHHH----HHHhcC--CCCCCCChHHH---HHHhcCceeecCCCCCcchhhhhh
Q 020230 167 VEMGSP-PPLYFNAGMFVYEPNLLTYHDLL----ETVKVT--PPTIFAEQDFL---NMYFKDIYKPIPPTYNLVVAMLWR 236 (329)
Q Consensus 167 ~~lg~~-~~~yfNsGVmlin~~~~~~~~ll----~~~~~~--~~~~~~DQdiL---N~~f~~~~~~Lp~~yN~~~~~~~~ 236 (329)
...+.. ...||||||||||+++|+.+++. ++++++ .+..+.|||+| |.+|.+++..||.+||+.. ..+.
T Consensus 401 i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~g-Lgy~ 479 (533)
T PLN02870 401 IAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLG-LGYQ 479 (533)
T ss_pred hhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCC-CCCc
Confidence 012332 35799999999999999876554 444443 24678999999 6899999999999999854 2232
Q ss_pred ccccC-CCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 237 HLENV-DVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 237 ~~~~~-~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
..... ..++++||||+| ..|||+..+ ...++..|-.|.+.+
T Consensus 480 ~~~~~~~i~~aaIIHY~G-~~KPW~~~~---------~~~yr~~W~kYl~~s 521 (533)
T PLN02870 480 SKTNIESVKKAAVIHYNG-QSKPWLEIG---------FEHLRPFWTKYVNYS 521 (533)
T ss_pred ccccccccCCcEEEEECC-CCCCccccC---------ccchhHHHHHHHccC
Confidence 11111 267899999999 899998765 356788888886654
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.93 E-value=1.6e-25 Score=215.60 Aligned_cols=176 Identities=16% Similarity=0.244 Sum_probs=125.5
Q ss_pred ccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCccCCCc
Q 020230 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (329)
Q Consensus 91 ~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 167 (329)
+..+|.||++|++. +.+||||||+|+||.+||++||+++. ..+|||+||...- ..+..+ +++ .+| +.+
T Consensus 337 s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f--~ry~~y-Lnf--S~p----~i~ 407 (534)
T PLN02742 337 SMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETF--HRYHKY-LNF--SHP----LIS 407 (534)
T ss_pred cHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhh--hhhhhh-hcc--cch----hhh
Confidence 35678999999975 68999999999999999999999964 5799999973210 000000 000 001 001
Q ss_pred ccCC-CCCCcccceEEEEecChHhHHHHHHHH---h-cCCCCCCCChHHHHH---HhcCceeecCCCCCcchhhhhhcc-
Q 020230 168 EMGS-PPPLYFNAGMFVYEPNLLTYHDLLETV---K-VTPPTIFAEQDFLNM---YFKDIYKPIPPTYNLVVAMLWRHL- 238 (329)
Q Consensus 168 ~lg~-~~~~yfNsGVmlin~~~~~~~~ll~~~---~-~~~~~~~~DQdiLN~---~f~~~~~~Lp~~yN~~~~~~~~~~- 238 (329)
. +. +..+|||+||||||+++|+.+++.+.+ . .+....+.|||.||. +|.+++..||++||+.. ..+...
T Consensus 408 ~-~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~g-LG~~~~v 485 (534)
T PLN02742 408 S-HFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLG-LGYDTNI 485 (534)
T ss_pred c-cCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheecc-ccccccc
Confidence 1 11 245899999999999999887765533 2 233457789999996 49999999999999964 222111
Q ss_pred ccCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 239 ENVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 239 ~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
..-..++++||||+| ..|||...+ ..++.++|+.|...+
T Consensus 486 ~~~~i~~aaILHynG-~~KPWl~~~---------i~~yr~~W~kYl~~s 524 (534)
T PLN02742 486 DPRLIESAAVLHFNG-NMKPWLKLA---------IERYKPLWERYVNYS 524 (534)
T ss_pred chhhccCCeEEEECC-CCCcccccC---------CcccchHHHHHHccC
Confidence 111267999999999 899999876 357889999997754
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.92 E-value=3.8e-26 Score=222.23 Aligned_cols=175 Identities=18% Similarity=0.273 Sum_probs=124.6
Q ss_pred ccccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCccCCCc
Q 020230 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (329)
Q Consensus 91 ~~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 167 (329)
+..+|+||++|++. +++||||||+|+||++||++||+++. +.+|||.||... ...+..+ +++ ..|. .
T Consensus 441 S~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~--f~r~~~~-l~f--s~p~-i---- 510 (639)
T PLN02829 441 SILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGES--FHRFDRY-LNF--SNPL-I---- 510 (639)
T ss_pred hHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhh--hhhhhhh-hhc--cchH-h----
Confidence 45678999999975 68999999999999999999999964 568899887321 0000000 000 0010 0
Q ss_pred ccCCC-CCCcccceEEEEecChHhHHHHHH----HHhcCCCCCCCChHHHHHH---hcCceeecCCCCCcchhhhhhccc
Q 020230 168 EMGSP-PPLYFNAGMFVYEPNLLTYHDLLE----TVKVTPPTIFAEQDFLNMY---FKDIYKPIPPTYNLVVAMLWRHLE 239 (329)
Q Consensus 168 ~lg~~-~~~yfNsGVmlin~~~~~~~~ll~----~~~~~~~~~~~DQdiLN~~---f~~~~~~Lp~~yN~~~~~~~~~~~ 239 (329)
..+.. ..+|||+||||||+++|+.+++.+ +++.+..-...|||.||.. |.+++..||.+||+... .|. +.
T Consensus 511 ~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GL-Gy~-~~ 588 (639)
T PLN02829 511 SKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGL-GYN-PN 588 (639)
T ss_pred hhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCC-CCC-cc
Confidence 00111 357999999999999998776544 3333333356999999976 59999999999999863 332 21
Q ss_pred cC--CCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 240 NV--DVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 240 ~~--~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
.. ..++++||||+| ..|||...+ .++|+++|..|....
T Consensus 589 v~~~~i~~aaIIHynG-~~KPWle~~---------i~~yr~lW~kYl~~~ 628 (639)
T PLN02829 589 VNQRDIERAAVIHYNG-NMKPWLEIG---------IPKYRNYWSKYVDYD 628 (639)
T ss_pred cchhcccCCeEEEECC-CCCccccCC---------cccchHHHHHHHhcC
Confidence 11 267899999999 899999876 467999999996653
No 21
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.91 E-value=3.3e-25 Score=215.43 Aligned_cols=173 Identities=17% Similarity=0.251 Sum_probs=125.2
Q ss_pred cccccceeccccc-ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCccCCCcc
Q 020230 92 VINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE 168 (329)
Q Consensus 92 ~~~y~KL~i~~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 168 (329)
..+|+||++|++. +.+||||||+|+||++||++||+++. ..+|||.||.... . .+..+ +++ .+|. + ..
T Consensus 460 ~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f-~-r~~~y-lnf--s~P~-i---~~ 530 (657)
T PLN02910 460 MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESF-H-RFDKY-LNF--SNPK-I---SE 530 (657)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhh-h-hhhhh-hcc--CChh-h---hh
Confidence 4568999999975 58999999999999999999999964 4688888874320 0 00000 000 0110 0 00
Q ss_pred cCCC-CCCcccceEEEEecChHhHHHHHHHH---hc-CCCCCCCChHHHH---HHhcCceeecCCCCCcchhhhhhcccc
Q 020230 169 MGSP-PPLYFNAGMFVYEPNLLTYHDLLETV---KV-TPPTIFAEQDFLN---MYFKDIYKPIPPTYNLVVAMLWRHLEN 240 (329)
Q Consensus 169 lg~~-~~~yfNsGVmlin~~~~~~~~ll~~~---~~-~~~~~~~DQdiLN---~~f~~~~~~Lp~~yN~~~~~~~~~~~~ 240 (329)
..+ ..+|||+||||||+++|+.+++.+.+ .+ +.+..+.|||.|| .+|.+++..||++||+... .+. +..
T Consensus 531 -yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GL-Gyd-~~v 607 (657)
T PLN02910 531 -NFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGL-GYD-PAL 607 (657)
T ss_pred -ccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCC-CCC-ccc
Confidence 111 35899999999999999987765533 22 2456789999999 6999999999999999862 222 111
Q ss_pred C--CCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhc
Q 020230 241 V--DVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYED 286 (329)
Q Consensus 241 ~--~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~ 286 (329)
. ..++++||||+| ..|||...+ ..+|+++|-.|+..
T Consensus 608 ~~~~i~~AAVLHynG-~~KPWl~l~---------i~~Yr~~W~kYl~~ 645 (657)
T PLN02910 608 NQTEIENAAVVHYNG-NYKPWLDLA---------IAKYKPYWSRYVQY 645 (657)
T ss_pred ccccccCcEEEEeCC-CCCcccccC---------cccchHHHHHHccC
Confidence 1 267899999999 899999876 46899999999664
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.63 E-value=2.9e-17 Score=147.24 Aligned_cols=241 Identities=25% Similarity=0.409 Sum_probs=139.1
Q ss_pred eCcccHHHHHHHHHHHHhcCC-------------CCcE-EEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCc-----hh
Q 020230 24 GNGDYVKGVVGLAKGLRKAKS-------------EYPL-VVAILPDVPEDHRQILESQGCIVREIEPVYPPEN-----QT 84 (329)
Q Consensus 24 ~d~~Y~~~a~vli~SL~~~~~-------------~~~i-~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~-----~~ 84 (329)
+|..|..+..++.+++..+.+ +..+ +++...++.+...+.|+..|..+..|+.++..+. ..
T Consensus 67 ~ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di 146 (368)
T COG5597 67 TNGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDI 146 (368)
T ss_pred hcCcccccchhhhhceeecccceehhhhhhcCcchhheeeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhcc
Confidence 366666666666666654422 2223 3344445555555555554543333443332111 01
Q ss_pred hhhhccccccccceecccccccceeEEEecceeeccCchhhhCCCCCceeeeechhccCC----------CCCCCCc---
Q 020230 85 EFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKT----------WSNSPQF--- 151 (329)
Q Consensus 85 ~~~~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~----------~~~~~~~--- 151 (329)
....+++...|+||.+|++.+||||||||+|.|+++++|+||+.+-..++|.+|.+..+. ++.++.+
T Consensus 147 ~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faay 226 (368)
T COG5597 147 KPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAY 226 (368)
T ss_pred CcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhh
Confidence 112244667899999999999999999999999999999999998655777777644320 1111000
Q ss_pred c-ccccccCCCccCCCc---ccC--CC--CCCcccceEEEEecChHhHHHHHHHHhc--CCCCCCCChHHHHHHhcC---
Q 020230 152 T-IGYCQQCPEKVQWPV---EMG--SP--PPLYFNAGMFVYEPNLLTYHDLLETVKV--TPPTIFAEQDFLNMYFKD--- 218 (329)
Q Consensus 152 ~-~~~~~~~p~~~~~p~---~lg--~~--~~~yfNsGVmlin~~~~~~~~ll~~~~~--~~~~~~~DQdiLN~~f~~--- 218 (329)
. .+.....| ..-|+. .++ .+ -+.+||||+|+++|++..+.++...+-- +....+..|.++|..++.
T Consensus 227 g~~r~~ly~P-ylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~ 305 (368)
T COG5597 227 GKMRAALYAP-YLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGF 305 (368)
T ss_pred cccHhhhccc-cccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhcc
Confidence 0 00000112 111210 111 11 2579999999999999988888766521 123345689999988762
Q ss_pred -ceeecCCCCCcchhhhhhccccCCCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHH
Q 020230 219 -IYKPIPPTYNLVVAMLWRHLENVDVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWD 282 (329)
Q Consensus 219 -~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~ 282 (329)
-|.+++++||-. |.... +..-.+-+| .|||+..+.+ + -+.....||+
T Consensus 306 FPwerld~~yNG~----wa~~n--dlPylka~H-----gK~W~y~g~~--f----p~i~~~ew~~ 353 (368)
T COG5597 306 FPWERLDPRYNGY----WADAN--DLPYLKAWH-----GKPWFYTGEQ--F----PDIAGLEWPQ 353 (368)
T ss_pred CchhhcCcccccc----ccccc--ccchHHHhh-----cCcCCCCccc--C----hhhhcCcChh
Confidence 478999999932 22110 112233444 5999987632 2 1345567773
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.16 E-value=5.6e-11 Score=113.96 Aligned_cols=200 Identities=36% Similarity=0.562 Sum_probs=143.5
Q ss_pred cccceecccccccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCC--cccCC
Q 020230 94 NYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWP--VEMGS 171 (329)
Q Consensus 94 ~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~lg~ 171 (329)
.+.++.++++.++.+.+|+|.|+-...+++.+|+.....-.+...+++-..+.+..++..+.|...+++.-|+ ..+..
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~ 192 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFA 192 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhcc
Confidence 3678888888899999999999999999999999976544555666554444444455555555544433222 12222
Q ss_pred CC--CCcccceEEEEecChHhHHHHHHHHhcCCCCCCCChHHHHHHhcCceeecCCCCCcchhhhhhccccCC-----CC
Q 020230 172 PP--PLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLENVD-----VD 244 (329)
Q Consensus 172 ~~--~~yfNsGVmlin~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~~~~-----~~ 244 (329)
.+ ...||+|.|++-|+...++.+.+.......+.++||+++|.+|...-...|+.+|+.....|.++..-. ..
T Consensus 193 ~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~ 272 (369)
T KOG1950|consen 193 TNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSV 272 (369)
T ss_pred CCCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhcccc
Confidence 22 245999999999999999888887776667789999999999986544888899998877776553211 23
Q ss_pred CeEEEEeeCCCCCCCccC-CCCCCCC-----chhhHHHHHHHHHHHhccccccccc
Q 020230 245 KVKVVHYCAAGSKPWRFT-GKEENMD-----RTDIKLLVKKWWDIYEDESLDYKNF 294 (329)
Q Consensus 245 ~~~IiHf~g~~~KPW~~~-~~~~~~~-----~~~~~~~~~~Ww~y~~~~~~~~~~~ 294 (329)
....+||.| ..|||... ..+|++. .+......+.||..|+++..+.+..
T Consensus 273 ~~~~~~y~~-~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 327 (369)
T KOG1950|consen 273 LRYALHYLG-ANKPELCYRDFDCNLDGDEFPRKDIDSLHKKWWDVYDDMSLDLKVH 327 (369)
T ss_pred cchhhhccc-cCCCCccccCcccccccccccchhHHHHHhccchhhccCchhhhhc
Confidence 345569998 55777765 3345543 3445677888999999999999875
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.28 E-value=3.1e-06 Score=77.93 Aligned_cols=110 Identities=19% Similarity=0.278 Sum_probs=74.1
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEEC--CCCCHHHHHHHHH-cCcEEEEeeecCCCCchh-hhhhccc
Q 020230 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAIL--PDVPEDHRQILES-QGCIVREIEPVYPPENQT-EFAMAYY 91 (329)
Q Consensus 16 ~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~--~~ls~~~~~~L~~-~~~~i~~v~~~~~~~~~~-~~~~~~~ 91 (329)
..+| ++..+.|+..+..+|+.||..+.+.||-|++. ++++++.++.|.. ....++++..+..++... .+..
T Consensus 2 rGIV--i~~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~--- 76 (271)
T PF11051_consen 2 RGIV--ITAGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSK--- 76 (271)
T ss_pred CEEE--EEecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeecccccccccc---
Confidence 3466 34567999999999999999999999977666 6799998888876 222233333222211100 0110
Q ss_pred cccccceecccccccceeEEEecceeeccCchhhhCCCC
Q 020230 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPD 130 (329)
Q Consensus 92 ~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~ 130 (329)
..-..|.++--...++.||+||+|.+.+.|++.||+.+.
T Consensus 77 ~~~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~~ 115 (271)
T PF11051_consen 77 KGFQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESEE 115 (271)
T ss_pred CCchhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCcc
Confidence 011234444334589999999999999999999999865
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.01 E-value=4.4e-05 Score=67.38 Aligned_cols=170 Identities=16% Similarity=0.171 Sum_probs=91.3
Q ss_pred CHHHHHHHHHcCcEEEEeeec--CCCCchhhhhh-ccccccccceecc-ccc-ccceeEEEecceeeccCchhhhCCCCC
Q 020230 57 PEDHRQILESQGCIVREIEPV--YPPENQTEFAM-AYYVINYSKLRIW-EFV-EYEKMIYLDGDIQVFDNIDHLFDAPDG 131 (329)
Q Consensus 57 s~~~~~~L~~~~~~i~~v~~~--~~~~~~~~~~~-~~~~~~y~KL~i~-~L~-~ydrVLYLDaD~lv~~dl~eLf~~~~~ 131 (329)
+++..+.|++.+.....+... ........... .+...++.|..+- +++ .--.|+|+|+|++.++|+.++|+.+..
T Consensus 12 D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~~ 91 (212)
T PF03407_consen 12 DEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPDA 91 (212)
T ss_pred CHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCCC
Confidence 466777888877664433322 11111111111 2223445565433 233 223599999999999999999943433
Q ss_pred ceeeeechhccCCCCCCCCccccccccCCCccCCCcccCCCCCCcccceEEEEecChHh---HHHHHHHHhcCCCCCCCC
Q 020230 132 YFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLT---YHDLLETVKVTPPTIFAE 208 (329)
Q Consensus 132 ~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg~~~~~yfNsGVmlin~~~~~---~~~ll~~~~~~~~~~~~D 208 (329)
.+....|..... + . .. ....+|+|+|.++++..+ +++..+.+... ....|
T Consensus 92 Di~~~~d~~~~~----------------~--~---~~----~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~D 144 (212)
T PF03407_consen 92 DILFSSDGWDGT----------------N--S---DR----NGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCWD 144 (212)
T ss_pred ceEEecCCCccc----------------c--h---hh----cCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcch
Confidence 344443421100 0 0 00 124579999999999865 34444444432 23359
Q ss_pred hHHHHHHhcCc--------eeecCCCCCcchhhhhhc--cccCC--CCCeEEEEeeC
Q 020230 209 QDFLNMYFKDI--------YKPIPPTYNLVVAMLWRH--LENVD--VDKVKVVHYCA 253 (329)
Q Consensus 209 QdiLN~~f~~~--------~~~Lp~~yN~~~~~~~~~--~~~~~--~~~~~IiHf~g 253 (329)
|.+||.++... +..||...-......+.. ...+. ...|.++|.+.
T Consensus 145 Q~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 145 QQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANC 201 (212)
T ss_pred HHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcC
Confidence 99999998753 456765432111111111 01111 35899999976
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.0012 Score=70.20 Aligned_cols=219 Identities=14% Similarity=0.154 Sum_probs=128.4
Q ss_pred eeeCcccHHHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHH----HcCcEEEEeeecCCCCchh--hhhhcccccc
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILE----SQGCIVREIEPVYPPENQT--EFAMAYYVIN 94 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~----~~~~~i~~v~~~~~~~~~~--~~~~~~~~~~ 94 (329)
+++..-|=.-+..++.|+.+|. +...|. ++-.-+|+.-++.+- +.+.++.-|.. ..|.-.. ..+.+ ..
T Consensus 1187 vASGHLYERflrIMm~SvlknTktpVKFW-fLkNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~EKQR---ii 1261 (1470)
T KOG1879|consen 1187 VASGHLYERFLRIMMLSVLKNTKTPVKFW-FLKNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQTEKQR---II 1261 (1470)
T ss_pred eccccHHHHHHHHHHHHHHhCCCCceeEE-eehhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhhhhhh---hh
Confidence 6678888899999999999874 334444 445568987665543 34545443432 2332110 11111 11
Q ss_pred c-cceeccc-c--cccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCccCCCcc
Q 020230 95 Y-SKLRIWE-F--VEYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE 168 (329)
Q Consensus 95 y-~KL~i~~-L--~~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 168 (329)
| +|+...+ | +..+||||.|||-||..||.||.+++. .+.|=++=|-+......+..++.|+...+ .
T Consensus 1262 WgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~h--------L 1333 (1470)
T KOG1879|consen 1262 WGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKH--------L 1333 (1470)
T ss_pred hhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHH--------h
Confidence 2 3543333 3 369999999999999999999999863 34555553321111111111233443321 2
Q ss_pred cCCCCCCcccceEEEEecChHhH----HHHHHH---Hhc-CCCCCCCChHHHHHHhc-CceeecCCCCCcchhhhhhccc
Q 020230 169 MGSPPPLYFNAGMFVYEPNLLTY----HDLLET---VKV-TPPTIFAEQDFLNMYFK-DIYKPIPPTYNLVVAMLWRHLE 239 (329)
Q Consensus 169 lg~~~~~yfNsGVmlin~~~~~~----~~ll~~---~~~-~~~~~~~DQdiLN~~f~-~~~~~Lp~~yN~~~~~~~~~~~ 239 (329)
.| ..|-=|...|+|+++-+. +++.-. +.. ..++.--|||+-|.+.+ =.++.||..|=+.- .|+..+
T Consensus 1334 ~g---rkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCE--TWC~d~ 1408 (1470)
T KOG1879|consen 1334 RG---RKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCE--TWCDDE 1408 (1470)
T ss_pred cc---CccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhh--hhcCch
Confidence 34 479999999999986321 222211 211 12355689999998875 35788998863322 243222
Q ss_pred cCCCCCeEEEEeeCCCCCCCccCC
Q 020230 240 NVDVDKVKVVHYCAAGSKPWRFTG 263 (329)
Q Consensus 240 ~~~~~~~~IiHf~g~~~KPW~~~~ 263 (329)
..+.+++|.-+ .-||....
T Consensus 1409 --skkkAktIDLC---nNP~TKEp 1427 (1470)
T KOG1879|consen 1409 --SKKKAKTIDLC---NNPLTKEP 1427 (1470)
T ss_pred --hhhhchhhhhh---cCccccch
Confidence 26788999876 47887653
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.81 E-value=0.033 Score=53.34 Aligned_cols=85 Identities=21% Similarity=0.176 Sum_probs=52.9
Q ss_pred CcccceEEEEecChHhHHHHHHHH--------------------hcCCCCCCCChHHHHHHhc-C--ce---eecCCCCC
Q 020230 175 LYFNAGMFVYEPNLLTYHDLLETV--------------------KVTPPTIFAEQDFLNMYFK-D--IY---KPIPPTYN 228 (329)
Q Consensus 175 ~yfNsGVmlin~~~~~~~~ll~~~--------------------~~~~~~~~~DQdiLN~~f~-~--~~---~~Lp~~yN 228 (329)
..+|+|+++|+..+|..+-|-+.+ ..-..+...||.+|-+++. + +| ..|...|-
T Consensus 243 ~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~ 322 (429)
T PLN03182 243 IGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYY 322 (429)
T ss_pred CccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecce
Confidence 579999999999997543322211 1112356799999998873 2 33 45666665
Q ss_pred cchhhhhh-------------ccccCCCCCeEEEEeeCCCCCCCccCC
Q 020230 229 LVVAMLWR-------------HLENVDVDKVKVVHYCAAGSKPWRFTG 263 (329)
Q Consensus 229 ~~~~~~~~-------------~~~~~~~~~~~IiHf~g~~~KPW~~~~ 263 (329)
++. +|. ++..-+..-|.|.||+| .||-....
T Consensus 323 l~G--yw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G--ckpC~~~~ 366 (429)
T PLN03182 323 LHG--YWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG--CKPCGGYG 366 (429)
T ss_pred ecc--ccHHHHHHHHHHHHhcCCCCCCcccceeEeecc--ceecCCCC
Confidence 543 121 11111245689999998 99986553
No 28
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=95.25 E-value=0.14 Score=42.17 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=53.9
Q ss_pred ccccccCCCCCCCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHc
Q 020230 2 SFVEITEPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ 67 (329)
Q Consensus 2 ~~~~~~~~~~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~ 67 (329)
.|+++..+....+..++|| ++.++++..+.-++.|++++.|+..++ ++.=|++++..+.|++.
T Consensus 48 ~~v~l~~~~~n~~~vvfVS--a~S~~h~~~~~~~i~si~~~~P~~k~i-lY~LgL~~~~i~~L~~~ 110 (142)
T PF07801_consen 48 PFVDLSSSSKNSSDVVFVS--ATSDNHFNESMKSISSIRKFYPNHKII-LYDLGLSEEQIKKLKKN 110 (142)
T ss_pred cceecccccccCCccEEEE--EecchHHHHHHHHHHHHHHHCCCCcEE-EEeCCCCHHHHHHHHhc
Confidence 4677788888888999998 457899999999999999999988865 67889999999999873
No 29
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=94.27 E-value=0.024 Score=51.17 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCCcccceEEEEecChHhHHHHHHHHhcC----CC---CCCCChHHHHHHhcC------ceeecCCCC-Ccchhhhhhcc
Q 020230 173 PPLYFNAGMFVYEPNLLTYHDLLETVKVT----PP---TIFAEQDFLNMYFKD------IYKPIPPTY-NLVVAMLWRHL 238 (329)
Q Consensus 173 ~~~yfNsGVmlin~~~~~~~~ll~~~~~~----~~---~~~~DQdiLN~~f~~------~~~~Lp~~y-N~~~~~~~~~~ 238 (329)
+...+|+|+++++.+.+.. .+++.+... .. ..+.||++|-.+++. +...+|.++ |.... ...
T Consensus 141 d~~gLNtGsFliRns~ws~-~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~---~~~ 216 (239)
T PF05637_consen 141 DWNGLNTGSFLIRNSPWSR-DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPE---DEC 216 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence 4578999999999999875 455544321 11 246899999888763 344556432 22111 000
Q ss_pred ccCCCCCeEEEEeeC
Q 020230 239 ENVDVDKVKVVHYCA 253 (329)
Q Consensus 239 ~~~~~~~~~IiHf~g 253 (329)
.....+...|+||+|
T Consensus 217 ~~~~~~GDfvvhfaG 231 (239)
T PF05637_consen 217 NYQYKEGDFVVHFAG 231 (239)
T ss_dssp ---------------
T ss_pred ccccccccccccccc
Confidence 111145669999998
No 30
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=90.39 E-value=0.33 Score=46.18 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=45.9
Q ss_pred EEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCCcccCCCCCCcccceEEEEecChH
Q 020230 110 IYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLL 189 (329)
Q Consensus 110 LYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg~~~~~yfNsGVmlin~~~~ 189 (329)
||||+|+||++++..|=+. ||..++ ... -.+.|.+||.++....
T Consensus 242 vYLDTDvIvLksl~~l~N~----ig~~~~-----------------------~~~---------~~~lnnavl~F~k~Hp 285 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV----IGVDPA-----------------------TQA---------WTRLNNAVLIFDKNHP 285 (409)
T ss_pred EEeeccEEEeccccccccc----ccccch-----------------------hhH---------HHhhcCceeecCCCCH
Confidence 7999999999999887764 321000 001 1568999999999986
Q ss_pred hH-HHHHHHHhcCCC--CCCCChHHHHHHhc
Q 020230 190 TY-HDLLETVKVTPP--TIFAEQDFLNMYFK 217 (329)
Q Consensus 190 ~~-~~ll~~~~~~~~--~~~~DQdiLN~~f~ 217 (329)
.. +.|-|+...+.. ....-.+++-.+++
T Consensus 286 fl~~cl~eF~~tfNg~~WG~NGP~LvTRVak 316 (409)
T KOG1928|consen 286 FLLECLREFALTYNGNIWGHNGPYLVTRVAK 316 (409)
T ss_pred HHHHHHHHHHHhccccccccCCcHHHHHHHH
Confidence 54 444455554432 33445567766665
No 31
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=85.22 E-value=2.7 Score=39.99 Aligned_cols=143 Identities=17% Similarity=0.119 Sum_probs=73.7
Q ss_pred ccccceeEEEecceeeccCchhhhCC---CCC-ceeeeechhccCCCCCCCCccccccccCCCcc-CCCcccCCCCCCcc
Q 020230 103 FVEYEKMIYLDGDIQVFDNIDHLFDA---PDG-YFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV-QWPVEMGSPPPLYF 177 (329)
Q Consensus 103 L~~ydrVLYLDaD~lv~~dl~eLf~~---~~~-~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~-~~p~~lg~~~~~yf 177 (329)
.++.+=|=+||.|.+++..--+|=+. +.. ...+-++. .+.+.....+.++.++..-+.. .| ..++..+...+
T Consensus 173 yP~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd--~~~~~~~n~~~~~~~~~~~d~~~~~-~~ii~qD~nG~ 249 (364)
T KOG4748|consen 173 YPDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRND--QKSINPLNIFRLRPRTPSLDDLEDI-AFIIPQDCNGI 249 (364)
T ss_pred CCCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhcccc--ccccccCCccccccccccccchhhh-ceecccCCCCc
Confidence 35789999999999999743333221 110 11112210 0111111111112221110100 11 23444455679
Q ss_pred cceEEEEecChHhHHHHHHHHhc----CCCCCCCChHHHHHHhc------CceeecCCCC-CcchhhhhhccccC-CCCC
Q 020230 178 NAGMFVYEPNLLTYHDLLETVKV----TPPTIFAEQDFLNMYFK------DIYKPIPPTY-NLVVAMLWRHLENV-DVDK 245 (329)
Q Consensus 178 NsGVmlin~~~~~~~~ll~~~~~----~~~~~~~DQdiLN~~f~------~~~~~Lp~~y-N~~~~~~~~~~~~~-~~~~ 245 (329)
|+|=+|+..+.+.. -+++...+ .-.....+|++|-.+++ +.|..||.|+ |... ...+.+ ..+.
T Consensus 250 naGSfLirns~~~~-~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~----~~~~~~g~~eg 324 (364)
T KOG4748|consen 250 NAGSFLIRNSEWGR-LLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYP----NGAPGYGYEEG 324 (364)
T ss_pred cccceEEecCccch-hHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCC----CCCCCCccccC
Confidence 99999999887421 23333322 12345689999998876 4577888775 2211 111222 2667
Q ss_pred eEEEEeeC
Q 020230 246 VKVVHYCA 253 (329)
Q Consensus 246 ~~IiHf~g 253 (329)
..++||+|
T Consensus 325 dlvvhFaG 332 (364)
T KOG4748|consen 325 DLVVHFAG 332 (364)
T ss_pred CeEEEecc
Confidence 89999999
No 32
>PLN03181 glycosyltransferase; Provisional
Probab=80.69 E-value=3.9 Score=39.63 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=55.3
Q ss_pred cccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCCccc-CCCCCCcccceEE
Q 020230 104 VEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEM-GSPPPLYFNAGMF 182 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~l-g~~~~~yfNsGVm 182 (329)
.+++-+-|||+|+||++.= +.++.... .+. .+ . ..+||..+ ..+.-..+|+|++
T Consensus 197 PeAEWfWWLDsDALIMNp~---~sLPl~ry---~~~------------NL---v----vhg~p~~vy~~qdw~GlN~GsF 251 (453)
T PLN03181 197 PEAEWIWWVDSDAVFTDMD---FKLPLHRY---RDH------------NL---V----VHGWPKLIYEKRSWTALNAGVF 251 (453)
T ss_pred CCceEEEEecCCceeecCC---CCCCHhhc---CCc------------cc---c----ccCCcccccccccccccceeee
Confidence 4789999999999999652 22221100 000 00 0 11222211 1112357999999
Q ss_pred EEecChHhHHHHHHHH--------------------hcCCCCCCCChHHHHHHhc---Cce---eecCCCCCcch
Q 020230 183 VYEPNLLTYHDLLETV--------------------KVTPPTIFAEQDFLNMYFK---DIY---KPIPPTYNLVV 231 (329)
Q Consensus 183 lin~~~~~~~~ll~~~--------------------~~~~~~~~~DQdiLN~~f~---~~~---~~Lp~~yN~~~ 231 (329)
+|+.++|-.+-|-... .......-.||.+|-+++- ++| ..|...|-++.
T Consensus 252 LIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~G 326 (453)
T PLN03181 252 LIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFEG 326 (453)
T ss_pred EEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeeee
Confidence 9999987543222111 1111234589999987763 233 35666665543
No 33
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=72.45 E-value=20 Score=28.78 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccc
Q 020230 29 VKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (329)
Q Consensus 29 ~~~a~vli~SL~~~~~-~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 107 (329)
...+.-++.||.+... ...++ ++.++-+++..+.+++....+..+. .+++.. . ...+-...+..+.+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~ii-ivdd~s~~~~~~~~~~~~~~~~~~~---~~~~~g-~-------~~a~n~~~~~~~~~ 76 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEVI-VVDNASTDGSVELLRELFPEVRLIR---NGENLG-F-------GAGNNQGIREAKGD 76 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEEE-EEECCCCchHHHHHHHhCCCeEEEe---cCCCcC-h-------HHHhhHHHhhCCCC
Confidence 4556678888887643 34444 4556656666666766543222111 111110 0 11121222233689
Q ss_pred eeEEEecceeeccC
Q 020230 108 KMIYLDGDIQVFDN 121 (329)
Q Consensus 108 rVLYLDaD~lv~~d 121 (329)
-++++|+|.++..+
T Consensus 77 ~i~~~D~D~~~~~~ 90 (166)
T cd04186 77 YVLLLNPDTVVEPG 90 (166)
T ss_pred EEEEECCCcEECcc
Confidence 99999999998654
No 34
>PRK15384 type III secretion system protein; Provisional
Probab=71.90 E-value=2.7 Score=37.68 Aligned_cols=32 Identities=16% Similarity=0.354 Sum_probs=24.6
Q ss_pred ccceeEEEecceeeccCchhhhCCCCCceeeeec
Q 020230 105 EYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMD 138 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d 138 (329)
.-+-+||||+|||+.+.|.-|+.-++ ||.-.|
T Consensus 215 ~~~GCIYLDaDMilT~KLG~ly~PDG--IavhV~ 246 (336)
T PRK15384 215 TNSGCIYLDADMIITEKLGGIYIPDG--IAVHVE 246 (336)
T ss_pred CCCceEEeeccceeecccccEEcCCc--eEEEEE
Confidence 45779999999999999998886544 554333
No 35
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=71.90 E-value=2.1 Score=33.03 Aligned_cols=89 Identities=10% Similarity=0.060 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCCCcEEEEECCCCC-----HHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccc
Q 020230 33 VGLAKGLRKAKSEYPLVVAILPDVP-----EDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (329)
Q Consensus 33 ~vli~SL~~~~~~~~i~vlv~~~ls-----~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 107 (329)
...+.|..++||++.+++ .+++.. ....+.|.+....+ ...............-..+-+.|+.+--. .
T Consensus 5 ~~~i~s~~~~nP~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~sD~~R~~~L~~---~ 77 (103)
T PF04488_consen 5 QCSIESWARHNPDYEYIL-WTDESDNVRVKRIDIEFLFEKTPWF---LELYNKWEPGRYPNYAHKSDLLRYLVLYK---Y 77 (103)
T ss_pred HHHHHHHHHHCCCCEEEE-EECCCcchhhhHHHHHHHHhCChHH---HHHHhhhhcccccchHHHHHHHHHHHHHH---c
Confidence 457889999999988764 455433 22233333211100 00000000000000001233556544221 1
Q ss_pred eeEEEecceeeccCc-hhhhCC
Q 020230 108 KMIYLDGDIQVFDNI-DHLFDA 128 (329)
Q Consensus 108 rVLYLDaD~lv~~dl-~eLf~~ 128 (329)
==+|+|.|+++++++ +++.+.
T Consensus 78 GGiY~D~D~~~~rpl~~~~~~~ 99 (103)
T PF04488_consen 78 GGIYLDLDVICLRPLDDPWLPE 99 (103)
T ss_pred CcEEEeCccccCcchhhhhhcc
Confidence 128999999999999 776643
No 36
>PRK15383 type III secretion system protein; Provisional
Probab=70.96 E-value=3 Score=37.36 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=24.5
Q ss_pred ccceeEEEecceeeccCchhhhCCCCCceeeeec
Q 020230 105 EYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMD 138 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d 138 (329)
.-+-+||||+|||+.+.|.-|+.-++ ||.-.|
T Consensus 218 ~~~GCIYLD~DMilT~KLG~ly~PDG--IavhV~ 249 (335)
T PRK15383 218 PGGGCIYLDADMLLTDKLGTLYLPDG--IAIHVS 249 (335)
T ss_pred CCCceEEeecceeeecccccEEcCCc--eEEEEE
Confidence 45779999999999999998886544 554333
No 37
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=69.64 E-value=11 Score=29.37 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHcCcE---EEEeeecCCCCchhhhhhccccccccceeccccc
Q 020230 29 VKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQGCI---VREIEPVYPPENQTEFAMAYYVINYSKLRIWEFV 104 (329)
Q Consensus 29 ~~~a~vli~SL~~~~~-~~~i~vlv~~~ls~~~~~~L~~~~~~---i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~ 104 (329)
...+..++.|+.+... ...++ +++++-+++..+.+.+.... ...+... .... ....+-...+..
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g--------~~~~~~~~~~~~ 76 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVI-VVDDGSTDGTLEILEEYAKKDPRVIRVINE---ENQG--------LAAARNAGLKAA 76 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEE-EEeCCCCccHHHHHHHHHhcCCCeEEEEec---CCCC--------hHHHHHHHHHHh
Confidence 4666778888887763 34444 45565555555555554321 2111111 1000 001111112222
Q ss_pred ccceeEEEecceeeccCch
Q 020230 105 EYEKMIYLDGDIQVFDNID 123 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~dl~ 123 (329)
+.|.++++|+|.++..+.-
T Consensus 77 ~~d~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 77 RGEYILFLDADDLLLPDWL 95 (156)
T ss_pred cCCEEEEECCCCccCccHH
Confidence 6899999999999876643
No 38
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=67.91 E-value=4.5 Score=36.29 Aligned_cols=32 Identities=28% Similarity=0.479 Sum_probs=24.6
Q ss_pred ccceeEEEecceeeccCchhhhCCCCCceeeeec
Q 020230 105 EYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMD 138 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d 138 (329)
.-+-+||||+|||+.+.|.-|+.-++ ||.-.|
T Consensus 210 ~~~GCIYLD~DMilT~KLG~ly~PDG--IavhV~ 241 (326)
T PRK15382 210 PCEGCIYLDADMIITDKLGVLYAPDG--IAVHVD 241 (326)
T ss_pred CCCceEEeecceeeecccccEEcCCc--eEEEEE
Confidence 45789999999999999998886544 554334
No 39
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=67.70 E-value=16 Score=34.09 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=61.8
Q ss_pred CCCCCeEEEEEeeeCcccHH-HHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHc-----------CcEEEEeeecC
Q 020230 11 MNVPKRAYVTFLAGNGDYVK-GVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ-----------GCIVREIEPVY 78 (329)
Q Consensus 11 ~~~~~~a~vT~l~~d~~Y~~-~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~-----------~~~i~~v~~~~ 78 (329)
|...+++.+|.+-++.+.+. +....-.|+ .+..++ +++|+.+.. .|+.. .++++.|+.+.
T Consensus 60 m~~c~vvV~saIFG~yD~l~qP~~i~~~s~----~~vcf~-mF~D~~t~~---~l~~~~~~~~~~~~ig~WrIv~v~~lp 131 (305)
T PF04765_consen 60 MEKCRVVVYSAIFGNYDKLRQPKNISEYSK----KNVCFF-MFVDEETLK---SLESEGHIPDENKKIGIWRIVVVKNLP 131 (305)
T ss_pred HhcCCEEEEEEecCCCccccCchhhCHHHh----cCccEE-EEEehhhHH---HHHhcCCccccccccCceEEEEecCCC
Confidence 34566777776666666663 444222333 244555 455655543 33331 24666665442
Q ss_pred CCCchhhhhhccccccccceecccc-cccceeEEEecceeeccCchhhhCC
Q 020230 79 PPENQTEFAMAYYVINYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDA 128 (329)
Q Consensus 79 ~~~~~~~~~~~~~~~~y~KL~i~~L-~~ydrVLYLDaD~lv~~dl~eLf~~ 128 (329)
..+ ++-...+.|++...+ .+|+--||+|+-+-+++|+..|.+.
T Consensus 132 ~~d-------~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 132 YDD-------PRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred Ccc-------hhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHH
Confidence 111 111234788888876 4899999999999999998888775
No 40
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=65.34 E-value=45 Score=30.58 Aligned_cols=184 Identities=15% Similarity=0.168 Sum_probs=86.4
Q ss_pred eCcccHHHHHHHHHHHHhcC-CCCcEE-EEECCCCCHHHHHHHHH-cCcEEEEeeecCCCCchhhhhhccccccccceec
Q 020230 24 GNGDYVKGVVGLAKGLRKAK-SEYPLV-VAILPDVPEDHRQILES-QGCIVREIEPVYPPENQTEFAMAYYVINYSKLRI 100 (329)
Q Consensus 24 ~d~~Y~~~a~vli~SL~~~~-~~~~i~-vlv~~~ls~~~~~~L~~-~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i 100 (329)
+-.+|..-..-.+.|..++- ++++.+ ++.||.-+.--.-.|.. ...++..|. +. ..|...+..|+.+
T Consensus 42 atGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~~r~~~V~~v~-----~~-----~~W~~~sl~Rm~~ 111 (271)
T cd02515 42 AVGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGPGRRLTVLKIA-----EE-----SRWQDISMRRMKT 111 (271)
T ss_pred EeccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCCCceeEEEEec-----cc-----cCCcHHHHHHHHH
Confidence 35689888888888888763 455543 45566422100001110 011222221 00 1222334445433
Q ss_pred c-----cc--cccceeEEEecceeeccCch-hhhCCCCCceeeeechhccCCCCCCCCccccccccCCCcc-CCCcccCC
Q 020230 101 W-----EF--VEYEKMIYLDGDIQVFDNID-HLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV-QWPVEMGS 171 (329)
Q Consensus 101 ~-----~L--~~ydrVLYLDaD~lv~~dl~-eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~-~~p~~lg~ 171 (329)
. ++ -++|-+.++|+|+++.+++. |.+. ..+|...-.+-.. ....+.-+ +.|... .-|...
T Consensus 112 ~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg---~lva~lHp~~y~~---~~~~fpYE---Rrp~S~AyIp~~e-- 180 (271)
T cd02515 112 LADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG---DSVAQLHPWWYGK---PRKQFPYE---RRPSSAAYIPEGE-- 180 (271)
T ss_pred HHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh---hhheecChhhhcC---CCCCCCCc---CCCCccccccCCC--
Confidence 3 22 37999999999999999886 3331 1222221110000 00001000 111100 001111
Q ss_pred CCCCcccceEEEEecChHhHHHHHHHHhc-----C-CC--CCCCChHHHHHHhcC-c-eeecCCCCCcch
Q 020230 172 PPPLYFNAGMFVYEPNLLTYHDLLETVKV-----T-PP--TIFAEQDFLNMYFKD-I-YKPIPPTYNLVV 231 (329)
Q Consensus 172 ~~~~yfNsGVmlin~~~~~~~~ll~~~~~-----~-~~--~~~~DQdiLN~~f~~-~-~~~Lp~~yN~~~ 231 (329)
..-|+-+||.==.+.. +-+|.+.+.+ . +. -.+.|..-||.+|-. + .+.|++.|+...
T Consensus 181 -GdfYy~Ga~~GG~~~~--vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 181 -GDFYYHGAVFGGSVEE--VYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred -CCeEEeeeecCccHHH--HHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCCc
Confidence 2346666654322222 2222222211 1 12 257999999999863 3 789999998865
No 41
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=64.08 E-value=14 Score=32.55 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=50.2
Q ss_pred CCCeEEEEEeeeCcccHHHHHHHHHHHHhcC-CC--CcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhc
Q 020230 13 VPKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SE--YPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMA 89 (329)
Q Consensus 13 ~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~-~~--~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~ 89 (329)
.++.+++.. +.|+. ..+..++.|+.... +. .+++ ++.++-++...+.++++... .+..+..+++...
T Consensus 28 ~~~isVvip-~~n~~--~~l~~~l~si~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~g~---- 97 (251)
T cd06439 28 LPTVTIIIP-AYNEE--AVIEAKLENLLALDYPRDRLEII-VVSDGSTDGTAEIAREYADK--GVKLLRFPERRGK---- 97 (251)
T ss_pred CCEEEEEEe-cCCcH--HHHHHHHHHHHhCcCCCCcEEEE-EEECCCCccHHHHHHHHhhC--cEEEEEcCCCCCh----
Confidence 344555532 23433 55667788887643 33 3343 45566566666666665432 1111111111110
Q ss_pred cccccccceecccccccceeEEEecceeeccC-chhhhCC
Q 020230 90 YYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 90 ~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf~~ 128 (329)
...+-...+....|-|+++|+|+++..+ +..+.+.
T Consensus 98 ----~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 98 ----AAALNRALALATGEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred ----HHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHH
Confidence 0111111122245889999999999765 5555543
No 42
>PRK11204 N-glycosyltransferase; Provisional
Probab=62.85 E-value=18 Score=35.04 Aligned_cols=99 Identities=20% Similarity=0.201 Sum_probs=49.0
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHcC---cEEEEeeecCCCCchhhhhhc
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQG---CIVREIEPVYPPENQTEFAMA 89 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~~~~i~vlv~~~ls~~~~~~L~~~~---~~i~~v~~~~~~~~~~~~~~~ 89 (329)
++.+++. -+-|+. ..+..++.|+.+. .++++++ +++|+-+++..+.+++.. .++..++ ..++... ...
T Consensus 54 p~vsViI-p~yne~--~~i~~~l~sl~~q~yp~~eii-VvdD~s~d~t~~~l~~~~~~~~~v~~i~---~~~n~Gk-a~a 125 (420)
T PRK11204 54 PGVSILV-PCYNEG--ENVEETISHLLALRYPNYEVI-AINDGSSDNTGEILDRLAAQIPRLRVIH---LAENQGK-ANA 125 (420)
T ss_pred CCEEEEE-ecCCCH--HHHHHHHHHHHhCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCcEEEEE---cCCCCCH-HHH
Confidence 3455543 233443 4456677887754 3445554 556665665555555432 2232222 1111110 000
Q ss_pred cccccccceecccccccceeEEEecceeeccC-chhhhC
Q 020230 90 YYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 90 ~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
. . ...+..++|-++.+|+|.++-.| +..+.+
T Consensus 126 l-----n--~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~ 157 (420)
T PRK11204 126 L-----N--TGAAAARSEYLVCIDGDALLDPDAAAYMVE 157 (420)
T ss_pred H-----H--HHHHHcCCCEEEEECCCCCCChhHHHHHHH
Confidence 0 0 00112358999999999998765 444443
No 43
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=61.60 E-value=19 Score=28.76 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCcEE-EEeeecCCCCchhhhhhccccccccceecccccccc
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIV-REIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~~i-~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 107 (329)
..+..++.||+... +..+++ ++.++-+++..+.+++..... ..+..+...++.. .. -.+-...+....|
T Consensus 10 ~~l~~~l~sl~~q~~~~~~ii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g-~~-------~~~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVI-VVDDGSTDDTLEILEELAALYIRRVLVVRDKENGG-KA-------GALNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEE-EEeCCCccchHHHHHHHhccccceEEEEEecccCC-ch-------HHHHHHHHhcCCC
Confidence 56667788888754 344544 455655656666666543221 0011111111110 00 0111111223688
Q ss_pred eeEEEecceeeccC-chhh
Q 020230 108 KMIYLDGDIQVFDN-IDHL 125 (329)
Q Consensus 108 rVLYLDaD~lv~~d-l~eL 125 (329)
-|+++|+|.++..+ +..+
T Consensus 81 ~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 81 IVVVLDADTILEPDALKRL 99 (180)
T ss_pred EEEEECCCCCcChHHHHHH
Confidence 99999999999776 4444
No 44
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=61.25 E-value=27 Score=30.33 Aligned_cols=87 Identities=13% Similarity=0.040 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceeccccccc
Q 020230 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEY 106 (329)
Q Consensus 30 ~~a~vli~SL~~~~~---~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 106 (329)
..+.-++.|+.+... +++++ ++.++-+++..+.++.+......+..+..+.. ... ..+-...+....
T Consensus 13 ~~l~~~l~sl~~q~~~~~~~evi-vvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~--~~~-------~a~N~g~~~a~~ 82 (249)
T cd02525 13 KYIEELLESLLNQSYPKDLIEII-VVDGGSTDGTREIVQEYAAKDPRIRLIDNPKR--IQS-------AGLNIGIRNSRG 82 (249)
T ss_pred hhHHHHHHHHHhccCCCCccEEE-EEeCCCCccHHHHHHHHHhcCCeEEEEeCCCC--Cch-------HHHHHHHHHhCC
Confidence 445666788876543 34444 45555556556666655432212222221111 000 011111222368
Q ss_pred ceeEEEecceeeccC-chhhh
Q 020230 107 EKMIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 107 drVLYLDaD~lv~~d-l~eLf 126 (329)
|-+++||+|.++..+ +..+.
T Consensus 83 d~v~~lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 83 DIIIRVDAHAVYPKDYILELV 103 (249)
T ss_pred CEEEEECCCccCCHHHHHHHH
Confidence 999999999987554 44444
No 45
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=60.85 E-value=21 Score=34.30 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=16.8
Q ss_pred cceeEEEecceeeccC-chhhhC
Q 020230 106 YEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 106 ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
.|-++++|+|+.+-.+ +..+.+
T Consensus 134 gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 134 ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred CCEEEEECCCCCCChhHHHHHHH
Confidence 7999999999998654 455543
No 46
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=59.01 E-value=21 Score=28.43 Aligned_cols=87 Identities=22% Similarity=0.388 Sum_probs=45.2
Q ss_pred ccHHHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHc---CcEEEEeeecCCCCchhhhhhccccccccceeccc
Q 020230 27 DYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWE 102 (329)
Q Consensus 27 ~Y~~~a~vli~SL~~~-~~~~~i~vlv~~~ls~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~ 102 (329)
.++. -++.||++. .....++ ++.++-+++..+.+++. +..+.-+.. +++. .+. ..+-...+
T Consensus 11 ~~l~---~~l~sl~~q~~~~~eii-vvdd~s~d~~~~~~~~~~~~~~~i~~i~~---~~n~-g~~-------~~~n~~~~ 75 (169)
T PF00535_consen 11 EYLE---RTLESLLKQTDPDFEII-VVDDGSTDETEEILEEYAESDPNIRYIRN---PENL-GFS-------AARNRGIK 75 (169)
T ss_dssp TTHH---HHHHHHHHHSGCEEEEE-EEECS-SSSHHHHHHHHHCCSTTEEEEEH---CCCS-HHH-------HHHHHHHH
T ss_pred HHHH---HHHHHHhhccCCCEEEE-Eeccccccccccccccccccccccccccc---cccc-ccc-------cccccccc
Confidence 5555 455666555 2333443 45555566777777765 233332221 1111 111 12222333
Q ss_pred ccccceeEEEecceeeccC-chhhhCC
Q 020230 103 FVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 103 L~~ydrVLYLDaD~lv~~d-l~eLf~~ 128 (329)
....+-+++||+|.++..+ +..|.+.
T Consensus 76 ~a~~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 76 HAKGEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp H--SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred ccceeEEEEeCCCceEcHHHHHHHHHH
Confidence 4456799999999999988 7777765
No 47
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=56.79 E-value=55 Score=28.22 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHc--CcEEEEeeecCCCCchhhhhhccccccccceecccccccc
Q 020230 30 KGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ--GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (329)
Q Consensus 30 ~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~--~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 107 (329)
..+..++.|+.+.. ..+++ ++.++-+++..+.|+.. ...+. +.. .. ... ... .+-...+....|
T Consensus 14 ~~l~~~l~sl~~q~-~~eii-vvdd~s~d~~~~~l~~~~~~~~~~-v~~--~~-~~g-~~~-------a~n~g~~~a~~d 79 (235)
T cd06434 14 DVFRECLRSILRQK-PLEII-VVTDGDDEPYLSILSQTVKYGGIF-VIT--VP-HPG-KRR-------ALAEGIRHVTTD 79 (235)
T ss_pred HHHHHHHHHHHhCC-CCEEE-EEeCCCChHHHHHHHhhccCCcEE-EEe--cC-CCC-hHH-------HHHHHHHHhCCC
Confidence 45556677887655 45554 45666666666665332 11111 111 11 100 000 110111223689
Q ss_pred eeEEEecceeeccC-chhhhCC-CCCceeee
Q 020230 108 KMIYLDGDIQVFDN-IDHLFDA-PDGYFYAV 136 (329)
Q Consensus 108 rVLYLDaD~lv~~d-l~eLf~~-~~~~iaAv 136 (329)
-|++||+|+++..+ |..+... ....++++
T Consensus 80 ~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v 110 (235)
T cd06434 80 IVVLLDSDTVWPPNALPEMLKPFEDPKVGGV 110 (235)
T ss_pred EEEEECCCceeChhHHHHHHHhccCCCEeEE
Confidence 99999999999987 5566544 23335554
No 48
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=55.98 E-value=48 Score=29.08 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcC-CC--CcEEEEECCCCCHHHHHHHHHcCc-EEEEeeecCCCCchhhhhhccccccccceecccccc
Q 020230 30 KGVVGLAKGLRKAK-SE--YPLVVAILPDVPEDHRQILESQGC-IVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~--~~i~vlv~~~ls~~~~~~L~~~~~-~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 105 (329)
..+.-++.||.... +. .+++ ++.++-+++..+.+++... ....+..+....+.. ... ++=...+...
T Consensus 14 ~~l~~~l~sl~~~~y~~~~~eii-vVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G-~~~-------a~n~g~~~a~ 84 (241)
T cd06427 14 EVLPQLIASLSALDYPRSKLDVK-LLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRT-KPK-------ACNYALAFAR 84 (241)
T ss_pred HHHHHHHHHHHhCcCCcccEEEE-EEECCCCchHHHHHHHhccCCCeeEEEecCCCCCc-hHH-------HHHHHHHhcC
Confidence 45667788887642 22 3333 4556666777777777542 111222221111110 000 0001112235
Q ss_pred cceeEEEecceeeccC
Q 020230 106 YEKMIYLDGDIQVFDN 121 (329)
Q Consensus 106 ydrVLYLDaD~lv~~d 121 (329)
.|=|+++|+|+++-.+
T Consensus 85 gd~i~~~DaD~~~~~~ 100 (241)
T cd06427 85 GEYVVIYDAEDAPDPD 100 (241)
T ss_pred CCEEEEEcCCCCCChH
Confidence 7889999999998654
No 49
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=55.94 E-value=80 Score=27.36 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=15.3
Q ss_pred cccceeEEEecceeeccC
Q 020230 104 VEYEKMIYLDGDIQVFDN 121 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d 121 (329)
.++|=|+++|+|+++..+
T Consensus 86 a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 86 AKGEYVAIFDADFVPPPD 103 (232)
T ss_pred CCCCEEEEEcCCCCCChH
Confidence 468999999999998655
No 50
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=54.52 E-value=6 Score=38.01 Aligned_cols=36 Identities=33% Similarity=0.588 Sum_probs=32.2
Q ss_pred cccccceecccccccceeEEEecceeeccCchhhhC
Q 020230 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFD 127 (329)
Q Consensus 92 ~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~ 127 (329)
...|.+++.+.+..+++.+.+|+|..++.+.+.+|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~ 185 (369)
T KOG1950|consen 150 ELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFS 185 (369)
T ss_pred hhcccccceeeecccccceEEeccchhcCChhhhhh
Confidence 456788999988899999999999999999999998
No 51
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=54.44 E-value=40 Score=27.88 Aligned_cols=85 Identities=5% Similarity=0.000 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccce
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEK 108 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydr 108 (329)
..+..++.||.+.. ++..+ +++.++-+++..+.+++....++.+.. . ++.. ... .+-...+....|-
T Consensus 11 ~~l~~~l~sl~~q~~~~~ev-ivvDd~s~d~~~~~~~~~~~~~~~~~~--~-~~~g-~~~-------a~n~~~~~a~~~~ 78 (202)
T cd06433 11 ETLEETIDSVLSQTYPNIEY-IVIDGGSTDGTVDIIKKYEDKITYWIS--E-PDKG-IYD-------AMNKGIALATGDI 78 (202)
T ss_pred HHHHHHHHHHHhCCCCCceE-EEEeCCCCccHHHHHHHhHhhcEEEEe--c-CCcC-HHH-------HHHHHHHHcCCCE
Confidence 55667788887543 34444 355555556666777665443222221 1 1111 111 1111122235788
Q ss_pred eEEEecceeeccC-chhhh
Q 020230 109 MIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 109 VLYLDaD~lv~~d-l~eLf 126 (329)
|++||+|.++..+ +..+.
T Consensus 79 v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 79 IGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred EEEeCCCcccCchHHHHHH
Confidence 9999999998765 55554
No 52
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=53.12 E-value=28 Score=31.88 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=18.6
Q ss_pred cccceeEEEecceeeccC-chhhhC
Q 020230 104 VEYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
...|-|+++|+|+++-.+ +..+..
T Consensus 87 A~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 87 ARGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred cCCCEEEEEcCCeeeCHHHHHHHHH
Confidence 367999999999999765 555555
No 53
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=50.29 E-value=22 Score=30.21 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=13.9
Q ss_pred cccceeEEEecceeecc
Q 020230 104 VEYEKMIYLDGDIQVFD 120 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~ 120 (329)
...|=++++|+|+++-.
T Consensus 85 a~~d~i~~~D~D~~~~~ 101 (196)
T cd02520 85 ARYDILVISDSDISVPP 101 (196)
T ss_pred CCCCEEEEECCCceECh
Confidence 45799999999998744
No 54
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=49.90 E-value=47 Score=27.99 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccce
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEK 108 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydr 108 (329)
..+.-++.||.+.. +..++ +++.++-++...+.+++.+.... +..+..+++.. ...... ..+ +... ..++|-
T Consensus 10 ~~l~~~l~sl~~q~~~~~ei-iivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g-~~~~~n-~~~-~~a~--~~~~d~ 82 (202)
T cd04185 10 DLLKECLDALLAQTRPPDHI-IVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLG-GAGGFY-EGV-RRAY--ELGYDW 82 (202)
T ss_pred HHHHHHHHHHHhccCCCceE-EEEECCCCcchHHHHHHhcCCCc-eEEEECccccc-hhhHHH-HHH-HHHh--ccCCCE
Confidence 34556778887543 34444 45666666666777776554321 22222222111 000000 000 1111 235899
Q ss_pred eEEEecceeeccC
Q 020230 109 MIYLDGDIQVFDN 121 (329)
Q Consensus 109 VLYLDaD~lv~~d 121 (329)
+++||+|.++..+
T Consensus 83 v~~ld~D~~~~~~ 95 (202)
T cd04185 83 IWLMDDDAIPDPD 95 (202)
T ss_pred EEEeCCCCCcChH
Confidence 9999999998754
No 55
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=49.09 E-value=75 Score=27.24 Aligned_cols=82 Identities=10% Similarity=-0.009 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcC-CC--CcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccc
Q 020230 31 GVVGLAKGLRKAK-SE--YPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (329)
Q Consensus 31 ~a~vli~SL~~~~-~~--~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 107 (329)
.+..++.||+... +. +.++ ++.++-+++..+.+++++... .+..+..+.+. ..+. ...-...+....|
T Consensus 16 ~l~~~l~sl~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~-~~~~------~~~n~~~~~a~~d 86 (234)
T cd06421 16 IVRKTLRAALAIDYPHDKLRVY-VLDDGRRPELRALAAELGVEY-GYRYLTRPDNR-HAKA------GNLNNALAHTTGD 86 (234)
T ss_pred HHHHHHHHHHhcCCCcccEEEE-EEcCCCchhHHHHHHHhhccc-CceEEEeCCCC-CCcH------HHHHHHHHhCCCC
Confidence 3456778887543 33 3443 566666667777777765421 11111111110 0000 0000111223689
Q ss_pred eeEEEecceeeccC
Q 020230 108 KMIYLDGDIQVFDN 121 (329)
Q Consensus 108 rVLYLDaD~lv~~d 121 (329)
-+++||+|.++-.+
T Consensus 87 ~i~~lD~D~~~~~~ 100 (234)
T cd06421 87 FVAILDADHVPTPD 100 (234)
T ss_pred EEEEEccccCcCcc
Confidence 99999999998654
No 56
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=49.02 E-value=54 Score=27.48 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=14.6
Q ss_pred cccceeEEEecceeeccC
Q 020230 104 VEYEKMIYLDGDIQVFDN 121 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d 121 (329)
.+.|=+++||+|.++..+
T Consensus 79 a~gd~i~~lD~Dd~~~~~ 96 (201)
T cd04195 79 CTYDWVARMDTDDISLPD 96 (201)
T ss_pred cCCCEEEEeCCccccCcH
Confidence 457889999999987654
No 57
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=48.68 E-value=73 Score=30.26 Aligned_cols=24 Identities=21% Similarity=0.426 Sum_probs=18.9
Q ss_pred cccceeEEEecceeeccCchhhhC
Q 020230 104 VEYEKMIYLDGDIQVFDNIDHLFD 127 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~dl~eLf~ 127 (329)
..++++|.||.|+++--+.=+-|+
T Consensus 96 ~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 96 FGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred cCCCEEEEECCCCccCHhHHHHHH
Confidence 369999999999999887544443
No 58
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=47.19 E-value=64 Score=27.47 Aligned_cols=76 Identities=14% Similarity=0.192 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccce
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEK 108 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydr 108 (329)
..+.-++.||.... +...++ ++.++-+++..+.+++.+..+.. .+... .. .+-...+....+-
T Consensus 12 ~~l~~~l~sl~~q~~~~~evi-vvdd~s~d~~~~~~~~~~~~~~~-----~~~g~---~~-------a~n~g~~~a~~~~ 75 (221)
T cd02522 12 ENLPRLLASLRRLNPLPLEII-VVDGGSTDGTVAIARSAGVVVIS-----SPKGR---AR-------QMNAGAAAARGDW 75 (221)
T ss_pred HHHHHHHHHHHhccCCCcEEE-EEeCCCCccHHHHHhcCCeEEEe-----CCcCH---HH-------HHHHHHHhccCCE
Confidence 45667788887654 344443 55655566666666663332221 11111 11 1111112234689
Q ss_pred eEEEecceeeccC
Q 020230 109 MIYLDGDIQVFDN 121 (329)
Q Consensus 109 VLYLDaD~lv~~d 121 (329)
|+++|+|..+..+
T Consensus 76 i~~~D~D~~~~~~ 88 (221)
T cd02522 76 LLFLHADTRLPPD 88 (221)
T ss_pred EEEEcCCCCCChh
Confidence 9999999988654
No 59
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=46.14 E-value=36 Score=31.14 Aligned_cols=88 Identities=7% Similarity=0.059 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhcCCC---CcEEEEECCCCCHHHHHHHHH-----cCcEEEEeeecCCCCchhhhhhccccccccceec
Q 020230 29 VKGVVGLAKGLRKAKSE---YPLVVAILPDVPEDHRQILES-----QGCIVREIEPVYPPENQTEFAMAYYVINYSKLRI 100 (329)
Q Consensus 29 ~~~a~vli~SL~~~~~~---~~i~vlv~~~ls~~~~~~L~~-----~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i 100 (329)
...+..++.||....+. ..+ |+|+++=++.+...+.+ ....+. .+..+.+. .+.. .+=..
T Consensus 11 ~~~l~~~l~Sl~~~~~~~~~~EI-IvVDd~S~d~t~~~~~~~~~~~~~~~v~---vi~~~~n~-G~~~-------a~N~g 78 (299)
T cd02510 11 LSTLLRTVHSVINRTPPELLKEI-ILVDDFSDKPELKLLLEEYYKKYLPKVK---VLRLKKRE-GLIR-------ARIAG 78 (299)
T ss_pred HHHHHHHHHHHHhcCchhcCCEE-EEEECCCCchHHHHHHHHHHhhcCCcEE---EEEcCCCC-CHHH-------HHHHH
Confidence 36677788998876542 233 45666655555444422 111222 22111111 1111 01011
Q ss_pred ccccccceeEEEecceeeccC-chhhhCC
Q 020230 101 WEFVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 101 ~~L~~ydrVLYLDaD~lv~~d-l~eLf~~ 128 (329)
.+....|-|++||+|+++..+ |..|.+.
T Consensus 79 ~~~A~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 79 ARAATGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HHHccCCEEEEEeCCcccCccHHHHHHHH
Confidence 112347899999999999654 5566543
No 60
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=44.39 E-value=26 Score=30.01 Aligned_cols=23 Identities=17% Similarity=0.355 Sum_probs=16.2
Q ss_pred ccceeEEEecceeeccC-chhhhC
Q 020230 105 EYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
..|-|++||+|.++..+ +..+.+
T Consensus 78 ~gd~i~~lD~D~~~~~~~l~~l~~ 101 (224)
T cd06442 78 RGDVIVVMDADLSHPPEYIPELLE 101 (224)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHH
Confidence 34789999999887653 444444
No 61
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=43.71 E-value=75 Score=25.48 Aligned_cols=86 Identities=10% Similarity=0.105 Sum_probs=44.2
Q ss_pred ccHHHHHHHHHHHHhcCCC-CcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccc
Q 020230 27 DYVKGVVGLAKGLRKAKSE-YPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (329)
Q Consensus 27 ~Y~~~a~vli~SL~~~~~~-~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 105 (329)
+.-..+..++.|+.+.... .. ++++.++-++...+.++........+.......+. ....++-.......
T Consensus 13 n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~ 83 (291)
T COG0463 13 NEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNG--------GLGAARNAGLEYAR 83 (291)
T ss_pred chhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccCC--------ChHHHHHhhHHhcc
Confidence 3447777888998876433 34 45667766666666666554332111111011110 11122222222222
Q ss_pred cceeEEEecceeeccCc
Q 020230 106 YEKMIYLDGDIQVFDNI 122 (329)
Q Consensus 106 ydrVLYLDaD~lv~~dl 122 (329)
-+-|+++|+|.+ ..+-
T Consensus 84 ~~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 84 GDYIVFLDADDQ-HPPE 99 (291)
T ss_pred CCEEEEEccCCC-CCHH
Confidence 389999999999 6543
No 62
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=41.86 E-value=82 Score=27.50 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceeccccccccee
Q 020230 30 KGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEKM 109 (329)
Q Consensus 30 ~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydrV 109 (329)
..+..++.||.... .++ ++++++-++.+.+.+++.+.++... .. .. +.. .|=+..+....|-|
T Consensus 13 ~~l~~~l~sl~~~~--~ei-ivvD~gStD~t~~i~~~~~~~v~~~---~~-~g---~~~-------~~n~~~~~a~~d~v 75 (229)
T cd02511 13 RNIERCLESVKWAV--DEI-IVVDSGSTDRTVEIAKEYGAKVYQR---WW-DG---FGA-------QRNFALELATNDWV 75 (229)
T ss_pred HHHHHHHHHHhccc--CEE-EEEeCCCCccHHHHHHHcCCEEEEC---CC-CC---hHH-------HHHHHHHhCCCCEE
Confidence 34556677776442 244 4566666677778888877776543 11 11 111 11111222346799
Q ss_pred EEEecceeeccC
Q 020230 110 IYLDGDIQVFDN 121 (329)
Q Consensus 110 LYLDaD~lv~~d 121 (329)
++||+|.++..+
T Consensus 76 l~lDaD~~~~~~ 87 (229)
T cd02511 76 LSLDADERLTPE 87 (229)
T ss_pred EEEeCCcCcCHH
Confidence 999999998765
No 63
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=41.67 E-value=85 Score=29.76 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=51.9
Q ss_pred CCCCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHc-C--cEEEEeee--cCCCCc-
Q 020230 12 NVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KS--EYPLVVAILPDVPEDHRQILESQ-G--CIVREIEP--VYPPEN- 82 (329)
Q Consensus 12 ~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~--~~~i~vlv~~~ls~~~~~~L~~~-~--~~i~~v~~--~~~~~~- 82 (329)
.+.+-|+|+ |+.|. =+.+++-+|+||-.+ |. .||.++|-...++++-++.+++. . +.+..|.. ...|+.
T Consensus 53 ~r~~Aafv~-LvrN~-dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~~I 130 (328)
T PF01793_consen 53 PRENAAFVM-LVRNS-DLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPDWI 130 (328)
T ss_dssp S---EEEEE-E--GG-GHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--TTS
T ss_pred CCCceEEEE-EEEch-hHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCCcC
Confidence 578889998 55555 499999999999743 44 57888766667999988888764 2 23333331 112211
Q ss_pred -hh-------hhhh---ccc-c---ccccce------ecccccccceeEEEecceeeccCch-hhhC
Q 020230 83 -QT-------EFAM---AYY-V---INYSKL------RIWEFVEYEKMIYLDGDIQVFDNID-HLFD 127 (329)
Q Consensus 83 -~~-------~~~~---~~~-~---~~y~KL------~i~~L~~ydrVLYLDaD~lv~~dl~-eLf~ 127 (329)
.. .+.. .+. . ....|+ ..+.|.+||-.-=++.|+-+..||+ ++|.
T Consensus 131 D~~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~YD~F~ 197 (328)
T PF01793_consen 131 DQEKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDIDYDPFR 197 (328)
T ss_dssp -HHHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---S-HHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCCCCHHH
Confidence 11 1110 010 0 012232 1233458999999999999999987 6664
No 64
>PRK10073 putative glycosyl transferase; Provisional
Probab=41.36 E-value=75 Score=29.83 Aligned_cols=85 Identities=12% Similarity=0.160 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcC---cEEEEeeecCCCCchhhhhhccccccccceecccccc
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQG---CIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~---~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 105 (329)
..+.-++.||.... ++..++ ++.|+-++.+.+.+++.. ..+..+. . ++.. ... +|=...+...
T Consensus 19 ~~L~~~l~Sl~~Qt~~~~EII-iVdDgStD~t~~i~~~~~~~~~~i~vi~---~-~n~G-~~~-------arN~gl~~a~ 85 (328)
T PRK10073 19 KDFRAFMESLIAQTWTALEII-IVNDGSTDNSVEIAKHYAENYPHVRLLH---Q-ANAG-VSV-------ARNTGLAVAT 85 (328)
T ss_pred HHHHHHHHHHHhCCCCCeEEE-EEeCCCCccHHHHHHHHHhhCCCEEEEE---C-CCCC-hHH-------HHHHHHHhCC
Confidence 44556678887543 344443 566666666656665432 2232222 1 1111 111 1111122234
Q ss_pred cceeEEEecceeeccC-chhhhC
Q 020230 106 YEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 106 ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
-|-|++||+|-.+..+ +..+.+
T Consensus 86 g~yi~flD~DD~~~p~~l~~l~~ 108 (328)
T PRK10073 86 GKYVAFPDADDVVYPTMYETLMT 108 (328)
T ss_pred CCEEEEECCCCccChhHHHHHHH
Confidence 6789999999998765 444444
No 65
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=39.67 E-value=1.8e+02 Score=24.09 Aligned_cols=84 Identities=18% Similarity=0.279 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCch-hhhhhccccccccceecccccc
Q 020230 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQ-TEFAMAYYVINYSKLRIWEFVE 105 (329)
Q Consensus 30 ~~a~vli~SL~~~~~---~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~-~~~~~~~~~~~y~KL~i~~L~~ 105 (329)
..+..++.||.+... .+.++ ++.++-+++..+.+++.+..+.... .+.+. ...... ..+....- .-..
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eii-vvdd~s~D~t~~~~~~~~~~~~~~~---~~~~~gk~~aln---~g~~~a~~-~~~~ 81 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIF-VVADNCTDDTAQVARAAGATVLERH---DPERRGKGYALD---FGFRHLLN-LADD 81 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEE-EEeCCCCchHHHHHHHcCCeEEEeC---CCCCCCHHHHHH---HHHHHHHh-cCCC
Confidence 345566777765432 23443 4566666777788877766543211 11111 000000 00001000 0125
Q ss_pred cceeEEEecceeeccC
Q 020230 106 YEKMIYLDGDIQVFDN 121 (329)
Q Consensus 106 ydrVLYLDaD~lv~~d 121 (329)
+|-|+++|+|+++-.+
T Consensus 82 ~d~v~~~DaD~~~~p~ 97 (183)
T cd06438 82 PDAVVVFDADNLVDPN 97 (183)
T ss_pred CCEEEEEcCCCCCChh
Confidence 8899999999998654
No 66
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=38.53 E-value=73 Score=28.05 Aligned_cols=23 Identities=9% Similarity=0.241 Sum_probs=16.4
Q ss_pred ccceeEEEecceeecc-CchhhhC
Q 020230 105 EYEKMIYLDGDIQVFD-NIDHLFD 127 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~-dl~eLf~ 127 (329)
..|-+++||+|..+.. .|..+++
T Consensus 93 ~g~~i~~lD~D~~~~~~~l~~l~~ 116 (243)
T PLN02726 93 SGDFVVIMDADLSHHPKYLPSFIK 116 (243)
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHH
Confidence 5689999999998643 2455554
No 67
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=37.48 E-value=22 Score=31.44 Aligned_cols=43 Identities=12% Similarity=0.111 Sum_probs=27.3
Q ss_pred cccceEEEEecChHhHHHHHHHHhc---C-CCCCCCChHHHHHHhcC
Q 020230 176 YFNAGMFVYEPNLLTYHDLLETVKV---T-PPTIFAEQDFLNMYFKD 218 (329)
Q Consensus 176 yfNsGVmlin~~~~~~~~ll~~~~~---~-~~~~~~DQdiLN~~f~~ 218 (329)
-+.||--+++...+..+-|.+++.- . .++...|-++|-.++..
T Consensus 81 Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~e 127 (222)
T PF03314_consen 81 EIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTDNGALHIFLAE 127 (222)
T ss_pred hhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCccHHHHHHHHH
Confidence 3667777788777655444444421 1 24567899999887764
No 68
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=37.09 E-value=73 Score=27.12 Aligned_cols=24 Identities=17% Similarity=0.147 Sum_probs=17.6
Q ss_pred cccceeEEEecceeeccC-chhhhC
Q 020230 104 VEYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
...|-|+++|+|.++..+ |..+..
T Consensus 81 ~~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 81 AKGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred hcCCEEEEECCCcccCHHHHHHHHH
Confidence 457999999999988754 444443
No 69
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=36.88 E-value=78 Score=25.94 Aligned_cols=87 Identities=11% Similarity=0.196 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCc----EEEEeeecCCCCchhhhhhccccccccceeccccc
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGC----IVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFV 104 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~----~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~ 104 (329)
..+.-++.||.... ....++ ++.++-++...+.+++... .++.+. ..+.. +.. +..+=...+..
T Consensus 10 ~~l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~--~~~~~---~~~-----~~~~n~g~~~a 78 (182)
T cd06420 10 EALELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHVW--QEDEG---FRK-----AKIRNKAIAAA 78 (182)
T ss_pred HHHHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEEE--cCCcc---hhH-----HHHHHHHHHHh
Confidence 44566778887653 344544 4555555555555554322 222221 11111 110 00111122234
Q ss_pred ccceeEEEecceeeccC-chhhhC
Q 020230 105 EYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
..+-+++||+|.++..+ |..+.+
T Consensus 79 ~g~~i~~lD~D~~~~~~~l~~~~~ 102 (182)
T cd06420 79 KGDYLIFIDGDCIPHPDFIADHIE 102 (182)
T ss_pred cCCEEEEEcCCcccCHHHHHHHHH
Confidence 57899999999988655 344433
No 70
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=36.40 E-value=1.2e+02 Score=26.05 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=18.1
Q ss_pred ccccccceeEEEecceeeccC-chhhh
Q 020230 101 WEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 101 ~~L~~ydrVLYLDaD~lv~~d-l~eLf 126 (329)
.+....|-+++||+|.++..+ +..++
T Consensus 80 ~~~a~gd~i~~lD~D~~~~~~~l~~~~ 106 (219)
T cd06913 80 IAQSSGRYLCFLDSDDVMMPQRIRLQY 106 (219)
T ss_pred HHhcCCCEEEEECCCccCChhHHHHHH
Confidence 334567999999999887654 44443
No 71
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=35.70 E-value=46 Score=31.80 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=15.3
Q ss_pred cccceeEEEecceeeccC
Q 020230 104 VEYEKMIYLDGDIQVFDN 121 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d 121 (329)
.++|-++++|+|+++-.+
T Consensus 125 a~ge~i~~~DaD~~~~p~ 142 (373)
T TIGR03472 125 ARHDILVIADSDISVGPD 142 (373)
T ss_pred ccCCEEEEECCCCCcChh
Confidence 468999999999998654
No 72
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=34.41 E-value=99 Score=25.78 Aligned_cols=22 Identities=18% Similarity=0.141 Sum_probs=16.3
Q ss_pred ccceeEEEecceeeccC-chhhh
Q 020230 105 EYEKMIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~d-l~eLf 126 (329)
..|=++++|+|..+..+ +..+.
T Consensus 83 ~~d~i~~ld~D~~~~~~~l~~~~ 105 (202)
T cd04184 83 TGEFVALLDHDDELAPHALYEVV 105 (202)
T ss_pred cCCEEEEECCCCcCChHHHHHHH
Confidence 46899999999988664 44443
No 73
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=34.19 E-value=87 Score=30.72 Aligned_cols=18 Identities=28% Similarity=0.436 Sum_probs=15.4
Q ss_pred cccceeEEEecceeeccC
Q 020230 104 VEYEKMIYLDGDIQVFDN 121 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d 121 (329)
..+|-++.+|+|.++-.|
T Consensus 154 a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 154 ARSEYLVCIDGDALLDKN 171 (444)
T ss_pred CCCCEEEEECCCCCcCHH
Confidence 358999999999998765
No 74
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=34.13 E-value=41 Score=27.70 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceeccccccc
Q 020230 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEY 106 (329)
Q Consensus 30 ~~a~vli~SL~~~~~---~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 106 (329)
..+.-++.||.+... .+.++ ++.++-++...+.++........+..+..+++.. .. ..+-...+...-
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~eii-vvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G-~~-------~a~n~g~~~a~g 80 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYEII-VVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG-KG-------AAVRAGFKAARG 80 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEEEE-EEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC-cc-------HHHHHHHHHhcC
Confidence 345567777776532 34443 4555545555666665433322222222221111 00 111111222234
Q ss_pred ceeEEEecceeeccC-chhhhCC
Q 020230 107 EKMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 107 drVLYLDaD~lv~~d-l~eLf~~ 128 (329)
|=+++||+|..+..+ ++.|...
T Consensus 81 d~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 81 DIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHH
Confidence 789999999888665 6666663
No 75
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=31.86 E-value=91 Score=30.57 Aligned_cols=100 Identities=10% Similarity=0.063 Sum_probs=48.2
Q ss_pred CCCeEEEEEeeeCcccHHHHHHHHHHHHhcC-CCCcE-EEEECCCCCHHHHHHHHH---cCcEEEEeeecCCCCchhhhh
Q 020230 13 VPKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SEYPL-VVAILPDVPEDHRQILES---QGCIVREIEPVYPPENQTEFA 87 (329)
Q Consensus 13 ~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~-~~~~i-~vlv~~~ls~~~~~~L~~---~~~~i~~v~~~~~~~~~~~~~ 87 (329)
.++.+.+. -+-|+. ..+..++.|+.+.. +...+ +++++++-+++..+.+++ ....+. +........ ..
T Consensus 48 ~P~vsVII-P~yNe~--~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~~G---ka 120 (439)
T TIGR03111 48 LPDITIII-PVYNSE--DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSDQG---KA 120 (439)
T ss_pred CCCEEEEE-EeCCCh--HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCCCC---HH
Confidence 34555553 223444 56667888887643 33223 345666666766665543 222221 211221111 11
Q ss_pred hccccccccceecccccccceeEEEecceeeccC-chhhh
Q 020230 88 MAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 88 ~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf 126 (329)
...+ ...+....|-|+.+|+|.++..| +.++.
T Consensus 121 ~AlN-------~gl~~s~g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 121 KALN-------AAIYNSIGKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred HHHH-------HHHHHccCCEEEEECCCCCcChHHHHHHH
Confidence 1000 00111235669999999998655 34443
No 76
>KOG4472 consensus Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) [Carbohydrate transport and metabolism]
Probab=31.38 E-value=1.6e+02 Score=28.47 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=42.0
Q ss_pred CCCCCCCCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHc
Q 020230 8 EPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KS--EYPLVVAILPDVPEDHRQILESQ 67 (329)
Q Consensus 8 ~~~~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~--~~~i~vlv~~~ls~~~~~~L~~~ 67 (329)
.|.-.+++.++|+ |+.|.+ +.+++.+|+|+..+ |. .||-++|=.+..+++-++..++.
T Consensus 75 ~~~~~r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~ 135 (399)
T KOG4472|consen 75 APSYPRENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDI 135 (399)
T ss_pred CCCCCCcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHH
Confidence 3444578888998 667777 99999999999753 33 57877654445888877766653
No 77
>COG5020 KTR1 Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=31.38 E-value=1.6e+02 Score=28.47 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=42.0
Q ss_pred CCCCCCCCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHc
Q 020230 8 EPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KS--EYPLVVAILPDVPEDHRQILESQ 67 (329)
Q Consensus 8 ~~~~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~--~~~i~vlv~~~ls~~~~~~L~~~ 67 (329)
.|.-.+++.++|+ |+.|.+ +.+++.+|+|+..+ |. .||-++|=.+..+++-++..++.
T Consensus 75 ~~~~~r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~ 135 (399)
T COG5020 75 APSYPRENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDI 135 (399)
T ss_pred CCCCCCcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHH
Confidence 3444578888998 667777 99999999999753 33 57877654445888877766653
No 78
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=31.30 E-value=1.4e+02 Score=29.53 Aligned_cols=106 Identities=23% Similarity=0.363 Sum_probs=47.1
Q ss_pred EEEeeeCc-ccHHHHHHHHHHHHhcC---CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCC-----CCchhhhhhc
Q 020230 19 VTFLAGNG-DYVKGVVGLAKGLRKAK---SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYP-----PENQTEFAMA 89 (329)
Q Consensus 19 vT~l~~d~-~Y~~~a~vli~SL~~~~---~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~-----~~~~~~~~~~ 89 (329)
|.++|+|. .|+.- ++.||+++. ..++|+| .-|+-.++..+.+++.+..+..|...+. +.....+...
T Consensus 97 VlV~AcNRp~yl~r---~L~sLl~~rp~~~~fpIiV-SQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y 172 (434)
T PF03071_consen 97 VLVFACNRPDYLRR---TLDSLLKYRPSAEKFPIIV-SQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGY 172 (434)
T ss_dssp EEEEESS-TT-HHH---HHHHHHHH-S-TTTS-EEE-EE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHHH
T ss_pred EEEEecCCcHHHHH---HHHHHHHcCCCCCCccEEE-EecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccch
Confidence 33355643 44554 455555543 3456653 3344455666777777654444432211 1010011100
Q ss_pred cccccccceec---ccccccceeEEEecceeeccCchhhhCC
Q 020230 90 YYVINYSKLRI---WEFVEYEKMIYLDGDIQVFDNIDHLFDA 128 (329)
Q Consensus 90 ~~~~~y~KL~i---~~L~~ydrVLYLDaD~lv~~dl~eLf~~ 128 (329)
+..+.-+|.-+ +....|++||.|.-|+.+--|.=+-|..
T Consensus 173 ~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 173 YKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 00111222222 2223699999999999998877666653
No 79
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=31.18 E-value=1.1e+02 Score=25.72 Aligned_cols=90 Identities=11% Similarity=0.050 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCcEE-EEeeecCCCCchhhhhhccccccccceecccccccc
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIV-REIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~~i-~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 107 (329)
..+..++.||+... ++..++ ++.++-+++..+.+++..... ..+..+...++... ... +.+ .......|
T Consensus 11 ~~l~~~l~sl~~q~~~~~eii-VvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~-----~n~--g~~~~~g~ 81 (214)
T cd04196 11 KYLREQLDSILAQTYKNDELI-ISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGV-ARN-----FES--LLQAADGD 81 (214)
T ss_pred HHHHHHHHHHHhCcCCCeEEE-EEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccH-HHH-----HHH--HHHhCCCC
Confidence 44556778887643 344444 455555555556565543221 11111111111110 100 111 12234688
Q ss_pred eeEEEecceeeccC-chhhhCC
Q 020230 108 KMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 108 rVLYLDaD~lv~~d-l~eLf~~ 128 (329)
-|++||+|.++..+ |..+.+.
T Consensus 82 ~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 82 YVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred EEEEECCCcccChhHHHHHHHH
Confidence 99999999888766 6777764
No 80
>PRK10063 putative glycosyl transferase; Provisional
Probab=30.99 E-value=2.6e+02 Score=24.97 Aligned_cols=18 Identities=6% Similarity=0.100 Sum_probs=14.9
Q ss_pred ccceeEEEecceeeccCc
Q 020230 105 EYEKMIYLDGDIQVFDNI 122 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~dl 122 (329)
..|-|++||+|-++..+.
T Consensus 82 ~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 82 QGRFALFLNSGDIFHQDA 99 (248)
T ss_pred CCCEEEEEeCCcccCcCH
Confidence 468999999998887764
No 81
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=30.34 E-value=4e+02 Score=24.85 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.7
Q ss_pred ccceeEEEecceeec
Q 020230 105 EYEKMIYLDGDIQVF 119 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~ 119 (329)
..|-|+++|+|...-
T Consensus 90 ~gd~vv~~DaD~q~~ 104 (325)
T PRK10714 90 TGDLIITLDADLQNP 104 (325)
T ss_pred CCCEEEEECCCCCCC
Confidence 578999999999853
No 82
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=27.18 E-value=2.3e+02 Score=26.02 Aligned_cols=49 Identities=12% Similarity=0.069 Sum_probs=29.5
Q ss_pred CCCCCCCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCC
Q 020230 8 EPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVP 57 (329)
Q Consensus 8 ~~~~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls 57 (329)
.+...++++.++|-|-....|++.-.-++.||-.-+....+-+++ ++.+
T Consensus 19 ~~~~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv-~d~~ 67 (269)
T PF03452_consen 19 DAARNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLV-SDSS 67 (269)
T ss_pred cccccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEc-CCCc
Confidence 344557777888766445678888888888882212233444444 4555
No 83
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=27.18 E-value=4.7e+02 Score=28.31 Aligned_cols=60 Identities=17% Similarity=0.067 Sum_probs=33.3
Q ss_pred EECCCCCHHHHHHHHHcCcEEEEeeecCCCCchhhhhhccccccccceecccccccceeEEEecceeeccCc
Q 020230 51 AILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNI 122 (329)
Q Consensus 51 lv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl 122 (329)
+++|+-+++..+..++.+++++.-. ++. +.+ ........+ ..+.|=|+.+|||.++..|.
T Consensus 297 VVDDgS~D~t~~la~~~~v~yI~R~-----~n~-~gK-AGnLN~aL~-----~a~GEyIavlDAD~ip~pdf 356 (852)
T PRK11498 297 ILDDGGREEFRQFAQEVGVKYIARP-----THE-HAK-AGNINNALK-----YAKGEFVAIFDCDHVPTRSF 356 (852)
T ss_pred EEeCCCChHHHHHHHHCCcEEEEeC-----CCC-cch-HHHHHHHHH-----hCCCCEEEEECCCCCCChHH
Confidence 5566667777777777776654221 111 000 000000011 13579999999999987764
No 84
>PF07069 PRRSV_2b: Porcine reproductive and respiratory syndrome virus 2b ; InterPro: IPR009775 This family consists of several Porcine reproductive and respiratory syndrome virus (PRRSV) ORF2b proteins. The function of this family is unknown however it is known that large amounts of 2b protein are present in the virion and it is thought that this protein may be an integral component of the virion [].
Probab=23.51 E-value=17 Score=25.28 Aligned_cols=14 Identities=57% Similarity=0.816 Sum_probs=11.8
Q ss_pred cccccchhhhcccC
Q 020230 303 EKIGSLFVTALSED 316 (329)
Q Consensus 303 ~~~~~~~~~~~~~~ 316 (329)
+|||.|||.|..|=
T Consensus 9 ~kigqlfvdaftef 22 (73)
T PF07069_consen 9 NKIGQLFVDAFTEF 22 (73)
T ss_pred HHHHHHHHHHHHHH
Confidence 69999999998763
No 85
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=21.53 E-value=2.6e+02 Score=29.43 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=23.4
Q ss_pred cccceeEEEecceeeccC-chhhhCC-C-CCceeeee
Q 020230 104 VEYEKMIYLDGDIQVFDN-IDHLFDA-P-DGYFYAVM 137 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d-l~eLf~~-~-~~~iaAv~ 137 (329)
..||-++.||||++.-+| +..+-.. . +..+|+|.
T Consensus 219 ~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 219 GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 368999999999999887 4555432 1 23466664
No 86
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=21.43 E-value=1.7e+02 Score=23.98 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=17.1
Q ss_pred cceeEEEecceeeccC-chhhhCC
Q 020230 106 YEKMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 106 ydrVLYLDaD~lv~~d-l~eLf~~ 128 (329)
.|-|+++|+|...-.+ +..+.+.
T Consensus 81 ~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 81 GDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 4889999999997544 5666653
No 87
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=21.14 E-value=1.6e+02 Score=28.17 Aligned_cols=85 Identities=16% Similarity=0.261 Sum_probs=43.2
Q ss_pred HHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCcEEE-EeeecCC-CCchhhhhhccccccccceecccccccceeEE
Q 020230 35 LAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVR-EIEPVYP-PENQTEFAMAYYVINYSKLRIWEFVEYEKMIY 111 (329)
Q Consensus 35 li~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~~~~i~-~v~~~~~-~~~~~~~~~~~~~~~y~KL~i~~L~~ydrVLY 111 (329)
++.|+.... +.++++ ++.|+-+++..+.+++.+.+.. .+..... .++..+... ...-+. ...+|=|+.
T Consensus 73 ~l~s~~~~dyp~~evi-vv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~a-----l~~~l~---~~~~d~V~~ 143 (439)
T COG1215 73 TLESLLSQDYPRYEVI-VVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAGA-----LNNGLK---RAKGDVVVI 143 (439)
T ss_pred HHHHHHhCCCCCceEE-EECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchHH-----HHHHHh---hcCCCEEEE
Confidence 444444433 445544 5666677888888887654431 1111111 111110000 001111 123899999
Q ss_pred EecceeeccC-chhhhCC
Q 020230 112 LDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 112 LDaD~lv~~d-l~eLf~~ 128 (329)
+|+|++.-.| |.++...
T Consensus 144 ~DaD~~~~~d~l~~~~~~ 161 (439)
T COG1215 144 LDADTVPEPDALRELVSP 161 (439)
T ss_pred EcCCCCCChhHHHHHHhh
Confidence 9999999876 5555544
No 88
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=20.20 E-value=3.1e+02 Score=25.43 Aligned_cols=89 Identities=12% Similarity=0.073 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEee-ecC-CCCchhhhhhccccccccceeccccc
Q 020230 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIE-PVY-PPENQTEFAMAYYVINYSKLRIWEFV 104 (329)
Q Consensus 30 ~~a~vli~SL~~~~~---~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~-~~~-~~~~~~~~~~~~~~~~y~KL~i~~L~ 104 (329)
..+.-++.||..... ...+ ++++++-++...+.+++.+.++.... .+. .+.+. .... +..+ .....
T Consensus 44 ~~I~~~l~sl~~~~~~~~~~EI-IVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~-Gkg~-----A~~~--g~~~a 114 (306)
T PRK13915 44 ETVGKVVDSIRPLLMEPLVDEL-IVIDSGSTDATAERAAAAGARVVSREEILPELPPRP-GKGE-----ALWR--SLAAT 114 (306)
T ss_pred HHHHHHHHHHHHHhccCCCcEE-EEEeCCCccHHHHHHHHhcchhhcchhhhhccccCC-CHHH-----HHHH--HHHhc
Confidence 334456667765321 2344 45666667777788887766543211 110 01110 0000 0100 11123
Q ss_pred ccceeEEEeccee-ec-cCchhhhC
Q 020230 105 EYEKMIYLDGDIQ-VF-DNIDHLFD 127 (329)
Q Consensus 105 ~ydrVLYLDaD~l-v~-~dl~eLf~ 127 (329)
..|-|+++|+|.. .- +.|..|..
T Consensus 115 ~gd~vv~lDaD~~~~~p~~l~~l~~ 139 (306)
T PRK13915 115 TGDIVVFVDADLINFDPMFVPGLLG 139 (306)
T ss_pred CCCEEEEEeCccccCCHHHHHHHHH
Confidence 5789999999997 42 33555553
Done!