Query 020230
Match_columns 329
No_of_seqs 232 out of 1433
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:46:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020230.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020230hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 4.9E-47 1.7E-51 344.3 19.1 241 14-290 3-260 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 9.4E-44 3.2E-48 334.1 18.4 245 14-294 2-263 (333)
3 3tzt_A Glycosyl transferase fa 100.0 4.4E-40 1.5E-44 301.8 15.1 242 15-287 5-271 (276)
4 1g9r_A Glycosyl transferase; a 100.0 6E-36 2E-40 279.0 15.8 220 22-263 5-256 (311)
5 2p6w_A VP54, putative glycosyl 76.5 6.4 0.00022 33.0 6.6 73 176-253 119-198 (213)
6 3bcv_A Putative glycosyltransf 69.1 3.3 0.00011 34.8 3.4 101 11-127 2-107 (240)
7 2d7i_A Polypeptide N-acetylgal 62.0 4.8 0.00016 39.5 3.4 102 14-128 112-220 (570)
8 1fo8_A Alpha-1,3-mannosyl-glyc 59.0 27 0.00094 31.9 7.7 99 22-127 9-121 (343)
9 1qg8_A Protein (spore coat pol 57.1 8.6 0.0003 32.5 3.8 89 30-127 14-111 (255)
10 3f1y_A Mannosyl-3-phosphoglyce 53.5 36 0.0012 31.5 7.7 95 14-117 94-191 (387)
11 1o7q_A N-acetyllactosaminide a 51.0 95 0.0032 27.5 9.5 188 24-232 56-263 (289)
12 1xhb_A Polypeptide N-acetylgal 49.5 20 0.00067 33.8 5.3 23 105-127 114-137 (472)
13 2z86_A Chondroitin synthase; G 45.1 67 0.0023 31.3 8.6 100 14-126 93-196 (625)
14 3ckj_A Putative uncharacterize 45.0 43 0.0015 29.8 6.7 103 13-127 47-155 (329)
15 1s4n_A Glycolipid 2-alpha-mann 41.3 79 0.0027 28.8 7.6 115 12-128 25-169 (348)
16 3ioh_A Histo-blood group ABO s 41.2 1.5E+02 0.0051 26.4 9.2 187 24-232 66-272 (298)
17 2z86_A Chondroitin synthase; G 27.7 95 0.0032 30.1 6.4 101 10-126 371-476 (625)
18 2ffu_A Ppgalnact-2, polypeptid 26.5 1.5E+02 0.005 27.9 7.4 24 104-127 145-169 (501)
19 2l9x_A Uncharacterized protein 22.7 18 0.00062 19.7 0.0 14 301-314 15-28 (30)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=4.9e-47 Score=344.32 Aligned_cols=241 Identities=30% Similarity=0.514 Sum_probs=196.5
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCCc--hhhhhhccc
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPEN--QTEFAMAYY 91 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~~--~~~~~~~~~ 91 (329)
++.|||| +++|++|+++++|+++||++++++++++++++++++++.+++|++.+.+++.|+.+..+.. ...+..+..
T Consensus 3 ~~~AyvT-l~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~ 81 (263)
T 3u2u_A 3 TDQAFVT-LTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPEL 81 (263)
T ss_dssp TTEEEEE-EESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTG
T ss_pred cceEEEE-EEECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcch
Confidence 5899999 5689999999999999999999999999999999999999999999999998887764321 111223345
Q ss_pred cccccceecccccccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCCcccCC
Q 020230 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGS 171 (329)
Q Consensus 92 ~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg~ 171 (329)
..+|+||.+|++.+||||||||+|++|++||++||+.+ .+||++|. +||
T Consensus 82 ~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~--~~aA~~d~------------------------~~~----- 130 (263)
T 3u2u_A 82 GVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDRE--ELSAAPDP------------------------GWP----- 130 (263)
T ss_dssp GGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEECT------------------------TST-----
T ss_pred hHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCC--cceEeccC------------------------CCC-----
Confidence 67899999999999999999999999999999999997 48888762 232
Q ss_pred CCCCcccceEEEEecChHhHHHHHHHHhcCCCCCCCChHHHHHHhcC-----ceeecCCCCCcchhhhhhccccCC--CC
Q 020230 172 PPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKD-----IYKPIPPTYNLVVAMLWRHLENVD--VD 244 (329)
Q Consensus 172 ~~~~yfNsGVmlin~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~-----~~~~Lp~~yN~~~~~~~~~~~~~~--~~ 244 (329)
.|||||||||||+..+++++++.+.++.++.++|||+||.+|.+ +++.||.+||++....|.+...+. .+
T Consensus 131 ---~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~ 207 (263)
T 3u2u_A 131 ---DCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGA 207 (263)
T ss_dssp ---TSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGG
T ss_pred ---ccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhcC
Confidence 69999999999999999999999887667788999999999987 789999999999876554332221 56
Q ss_pred CeEEEEeeCCCCCCCccCCCCCC--------CCchhhHHHHHHHHHHHhccccc
Q 020230 245 KVKVVHYCAAGSKPWRFTGKEEN--------MDRTDIKLLVKKWWDIYEDESLD 290 (329)
Q Consensus 245 ~~~IiHf~g~~~KPW~~~~~~~~--------~~~~~~~~~~~~Ww~y~~~~~~~ 290 (329)
+++||||+| ..|||+....+.. .....+..+...||..|.+....
T Consensus 208 ~~~IIHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~~~~~~~~~ 260 (263)
T 3u2u_A 208 SAKVVHFLG-RVKPWNYTYDPKTKSVKSEAHDPNMTHPEFLILWWNIFTTNVLP 260 (263)
T ss_dssp GCSEEECCS-SSCGGGSEEETTTTEEECCSSCGGGSSTHHHHHHHHHHHHHTGG
T ss_pred CeEEEEECC-CCcCCCCCCCCCCCcccccCCCcchhHHHHHHHHHHHHHhhcCc
Confidence 899999999 7999997532110 00001257899999999876543
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=9.4e-44 Score=334.07 Aligned_cols=245 Identities=28% Similarity=0.499 Sum_probs=194.2
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeecCCCC--chhhhhhccc
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPE--NQTEFAMAYY 91 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~~~--~~~~~~~~~~ 91 (329)
++.||||+ ++|++|++++.|+++||++++++++++++++++++++.++.|++.+..++.|+.+.... ....+..+++
T Consensus 2 s~~a~vt~-~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 2 TDQAFVTL-TTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp CSEEEEEE-ESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred CceEEEEE-EeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccch
Confidence 57899994 68999999999999999999999999988999999999999999998888887664332 1111223345
Q ss_pred cccccceecccccccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCccCCCcccCC
Q 020230 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGS 171 (329)
Q Consensus 92 ~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~lg~ 171 (329)
..+|+||++|+|.+||||||||||+||++||++||+++ .+|||+|. +||
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~--~~aAv~d~------------------------~~~----- 129 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFERE--ELSAAPDP------------------------GWP----- 129 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEECS------------------------SST-----
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCC--ceeEEecC------------------------CCC-----
Confidence 67899999999999999999999999999999999997 48888762 332
Q ss_pred CCCCcccceEEEEecChHhHHHHHHHHhcCCCCCCCChHHHHHHhcCce-----eecCCCCCcchhhhhhccccC--CCC
Q 020230 172 PPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDIY-----KPIPPTYNLVVAMLWRHLENV--DVD 244 (329)
Q Consensus 172 ~~~~yfNsGVmlin~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~-----~~Lp~~yN~~~~~~~~~~~~~--~~~ 244 (329)
.||||||||+|++..+++++++.+.++..+.++|||+||.+|.+.. ..||.+||++....|.+...+ ...
T Consensus 130 ---~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~ 206 (333)
T 1ll2_A 130 ---DCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGA 206 (333)
T ss_dssp ---TSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGG
T ss_pred ---cceeeeEEEEeCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcC
Confidence 6899999999999999999999988766778899999999998532 799999999986544321111 146
Q ss_pred CeEEEEeeCCCCCCCccCCCC--CCC--Cchh----hHHHHHHHHHHHhccccccccc
Q 020230 245 KVKVVHYCAAGSKPWRFTGKE--ENM--DRTD----IKLLVKKWWDIYEDESLDYKNF 294 (329)
Q Consensus 245 ~~~IiHf~g~~~KPW~~~~~~--~~~--~~~~----~~~~~~~Ww~y~~~~~~~~~~~ 294 (329)
+++||||+| ..|||+..... ... ..+. ...+.+.||++|++.+......
T Consensus 207 ~~~IiHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~~~~~~~~~~~~~ 263 (333)
T 1ll2_A 207 NAKVVHFLG-QTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSVVPLLQQ 263 (333)
T ss_dssp GCSEEECCS-SCCGGGSCEETTTTEEC--------CCHHHHHHHHHHHHHTHHHHHTC
T ss_pred CCEEEEECC-CCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHhhcccccch
Confidence 899999999 79999976311 110 1111 2478999999999987765543
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=4.4e-40 Score=301.84 Aligned_cols=242 Identities=18% Similarity=0.249 Sum_probs=163.4
Q ss_pred CeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEE-EECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhhh--h
Q 020230 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVV-AILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEF--A 87 (329)
Q Consensus 15 ~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i~v-lv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~--~ 87 (329)
++.+| +++|++|++++.|+++||++++++.++.+ ++++++++++++.|++. ++++..+..- . +....+ .
T Consensus 5 ~i~I~--~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~-~-~~~~~~~~~ 80 (276)
T 3tzt_A 5 ADALL--LTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRAT-D-DLFSFAKVT 80 (276)
T ss_dssp CEEEE--EECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred eEEEE--EEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeC-H-HHHhcCccc
Confidence 34455 77899999999999999999998655543 56789999998887763 5555444321 1 111111 1
Q ss_pred hccccccccceeccccc--ccceeEEEecceeeccCchhhhCCCC--CceeeeechhccCCCCCCCCccccccccCCCcc
Q 020230 88 MAYYVINYSKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDAPD--GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV 163 (329)
Q Consensus 88 ~~~~~~~y~KL~i~~L~--~ydrVLYLDaD~lv~~dl~eLf~~~~--~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~ 163 (329)
.+++..+|+||++|++. +++||||||+|++|++||++||+++. ..+|||+|+.+......
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~---------------- 144 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANN---------------- 144 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC-------------------------
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHH----------------
Confidence 23456789999999985 59999999999999999999999863 47999999754210000
Q ss_pred CCCcccCCCCCCcccceEEEEecChHhH----HHHHHHHhcCC-CCCCCChHHHHHHhcCceeecCC-CCCcchhhhh--
Q 020230 164 QWPVEMGSPPPLYFNAGMFVYEPNLLTY----HDLLETVKVTP-PTIFAEQDFLNMYFKDIYKPIPP-TYNLVVAMLW-- 235 (329)
Q Consensus 164 ~~p~~lg~~~~~yfNsGVmlin~~~~~~----~~ll~~~~~~~-~~~~~DQdiLN~~f~~~~~~Lp~-~yN~~~~~~~-- 235 (329)
.+...++. +..||||||||+|+++|+. +++++.++++. ++.++|||+||.+|.++|+.||. +||++.....
T Consensus 145 ~~~~~l~~-~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~ 223 (276)
T 3tzt_A 145 VNRIRLGT-DTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSY 223 (276)
T ss_dssp ------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGGGEEEEEHHHHSEETTCHHHH
T ss_pred HHHhcCCC-CCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhCCEEECCchheeeecccchhh
Confidence 00011222 2489999999999999764 56667776553 56789999999999999999999 9999975321
Q ss_pred h--ccccC----CCCCeEEEEeeCCCCCCCccCCCCCCCCchhhHHHHHHHHHHHhcc
Q 020230 236 R--HLENV----DVDKVKVVHYCAAGSKPWRFTGKEENMDRTDIKLLVKKWWDIYEDE 287 (329)
Q Consensus 236 ~--~~~~~----~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~y~~~~ 287 (329)
. ....+ ..++++||||+| ..|||+..+ .++++++||+|++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~iiHy~g-~~KPW~~~~---------~~~~~~~w~~Y~~~~ 271 (276)
T 3tzt_A 224 LIRSKKQADLAWLMDHTVVLHFCG-RDKPWKKNH---------RNKFTSLYKHYMSLT 271 (276)
T ss_dssp HHHTTTCCSHHHHHHHCCEEECCS-SCCTTSTTC---------CSTTHHHHHHHHHHH
T ss_pred hccccchhhhhhhccCCeEEEECC-CCCCcCCCC---------CCchHHHHHHHHHHH
Confidence 1 11111 145799999999 899999765 357899999998753
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=6e-36 Score=278.99 Aligned_cols=220 Identities=25% Similarity=0.391 Sum_probs=159.3
Q ss_pred eeeCcccHHHHHHHHHHH-HhcCC-CCcEEEEECCCCCHHHHHHHHHc----CcEEEEeeecCCCCchhhhh---hcccc
Q 020230 22 LAGNGDYVKGVVGLAKGL-RKAKS-EYPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEFA---MAYYV 92 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL-~~~~~-~~~i~vlv~~~ls~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~~---~~~~~ 92 (329)
+++|++|+.++.|+++|| +++++ ++.+++ ++++++++.++.|++. +.++..+.. +.. ....+. ..++.
T Consensus 5 ~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~i-l~~~ls~~~~~~L~~~~~~~~~~i~~~~~-~~~-~~~~~~~~~~~~s~ 81 (311)
T 1g9r_A 5 FAADDNYAAYLCVAAKSVEAAHPDTEIRFHV-LDAGISEANRAAVAANLRGGGGNIRFIDV-NPE-DFAGFPLNIRHISI 81 (311)
T ss_dssp EEECGGGHHHHHHHHHHHHHTCTTSCCEEEE-EESSCCHHHHHHHHHHSGGGTTTEEEEEC-CGG-GGTTSCCCCTTCCG
T ss_pred EECCHhHHHHHHHHHHHHHHHcCCCCceEEE-EECCCCHHHHHHHHHHHHHcCCEEEEEEc-CHH-HHhcCccccccCCH
Confidence 568999999999999999 66543 344554 5788999999988875 554443321 110 011111 12346
Q ss_pred ccccceecccc-cccceeEEEecceeeccCchhhhCCC--CCceeeeechhccCCCCCCCCccccccccCCCccCCCccc
Q 020230 93 INYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEM 169 (329)
Q Consensus 93 ~~y~KL~i~~L-~~ydrVLYLDaD~lv~~dl~eLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~l 169 (329)
.+|+||++|++ .++|||||||||+||++||++||+++ +..+|||+|+.+... ..|...+
T Consensus 82 ~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~------------------~~~~~~~ 143 (311)
T 1g9r_A 82 TTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQ------------------EGYKQKI 143 (311)
T ss_dssp GGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTS------------------TTHHHHT
T ss_pred HHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhh------------------HHHHHhc
Confidence 78999999996 48999999999999999999999985 357999999865310 0111234
Q ss_pred CCC-CCCcccceEEEEecChHh----HHHHHHHHhcC-CCCCCCChHHHHHHhcCceeecCCCCCcchhhhhh-----cc
Q 020230 170 GSP-PPLYFNAGMFVYEPNLLT----YHDLLETVKVT-PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWR-----HL 238 (329)
Q Consensus 170 g~~-~~~yfNsGVmlin~~~~~----~~~ll~~~~~~-~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~-----~~ 238 (329)
|.. ...||||||||+|+++|+ .+++++.++++ ....++|||+||.+|.++|..||.+||++...... .+
T Consensus 144 ~~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~ 223 (311)
T 1g9r_A 144 GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFAS 223 (311)
T ss_dssp TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----C
T ss_pred CCCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhccc
Confidence 432 346999999999999875 56777777654 34678999999999999999999999999754211 00
Q ss_pred c---------cCCCCCeEEEEeeCCCCCCCccCC
Q 020230 239 E---------NVDVDKVKVVHYCAAGSKPWRFTG 263 (329)
Q Consensus 239 ~---------~~~~~~~~IiHf~g~~~KPW~~~~ 263 (329)
. ....++++||||+| ..|||+..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~iiHy~g-~~KPW~~~~ 256 (311)
T 1g9r_A 224 RHTDPLYRDRTNTVMPVAVSHYCG-PAKPWHRDC 256 (311)
T ss_dssp SCCCHHHHHHHSCCSSCSEEECCS-SCCTTSSSC
T ss_pred ccchhhhhHHhhccCCCEEEEeCC-cCCCCCCCC
Confidence 0 01145889999999 799999764
No 5
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=76.54 E-value=6.4 Score=33.00 Aligned_cols=73 Identities=19% Similarity=0.226 Sum_probs=40.7
Q ss_pred cccceEEEEecChHhHHHH---HHHHhcCCCCCCCChHHHHHHhc---Cc-eeecCCCCCcchhhhhhccccCCCCCeEE
Q 020230 176 YFNAGMFVYEPNLLTYHDL---LETVKVTPPTIFAEQDFLNMYFK---DI-YKPIPPTYNLVVAMLWRHLENVDVDKVKV 248 (329)
Q Consensus 176 yfNsGVmlin~~~~~~~~l---l~~~~~~~~~~~~DQdiLN~~f~---~~-~~~Lp~~yN~~~~~~~~~~~~~~~~~~~I 248 (329)
..|+|++|+..+.-..+++ ++++.....+.+....+...+|. ++ +..=|..-||.... +++. .+++..
T Consensus 119 ~lNtGvfL~~~~~~~irncqWSld~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~ 193 (213)
T 2p6w_A 119 PINTGVKFVHKDALEIEKIVWSLRNEAPWNTFPYEQKTVYEYVFPRIPGRYIVHDPYTLNCIVKA---YPEH--VKDALF 193 (213)
T ss_dssp SCCTTEEEEEGGGHHHHHHHHHTTTSTTTTSTTTHHHHHHHTHHHHSTTSEEEECCTTTSEETTT---CTTT--GGGCSE
T ss_pred cccceeeeecccchhhhhceeehhhhhcccCCCcccceeeeeeccCCCcceEecCcceeeeehhh---chhh--hhhhhh
Confidence 5799999998876444443 22222222334333355566664 33 23344566766532 2322 457889
Q ss_pred EEeeC
Q 020230 249 VHYCA 253 (329)
Q Consensus 249 iHf~g 253 (329)
+|.+|
T Consensus 194 ~~~~~ 198 (213)
T 2p6w_A 194 VHMCG 198 (213)
T ss_dssp EECTT
T ss_pred hhhcc
Confidence 99998
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=69.11 E-value=3.3 Score=34.82 Aligned_cols=101 Identities=15% Similarity=0.183 Sum_probs=49.2
Q ss_pred CCCCCeEEEEEeeeCcccHHHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHc---CcEEEEeeecCCCCchhhh
Q 020230 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEF 86 (329)
Q Consensus 11 ~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~ 86 (329)
+..++..+++...-...|+. -++.||+... ++..++ ++.++-+++..+.++++ ..++.-+.. . +. .+
T Consensus 2 ~~~p~vsViIp~yn~~~~l~---~~l~Sl~~q~~~~~eiI-vvDd~S~d~t~~~~~~~~~~~~~i~~i~~--~--n~-G~ 72 (240)
T 3bcv_A 2 SLIPKVSVIVPIYNVEKYLD---QCVQALLAQTLSDIEII-LIDDESPDNCPKICDDYAAQYPNIKVIHK--K--NA-GL 72 (240)
T ss_dssp -CCCSEEEEEEESSCTTTHH---HHHHHHHTCSSSSEEEE-EEECCCSSSHHHHHHHHHHHCSSEEEEEC--C--CC-CH
T ss_pred CCCCcEEEEEecCCCHHHHH---HHHHHHHhCcCCCeEEE-EEECCCCcCHHHHHHHHHhhCCCEEEEEC--C--CC-Ch
Confidence 33456666643322344554 5677877543 344443 56665555555555543 223332221 1 11 11
Q ss_pred hhccccccccceecccccccceeEEEecceeeccC-chhhhC
Q 020230 87 AMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 87 ~~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
.. +|=...+....|-|++||+|.++..+ |..|.+
T Consensus 73 ~~-------a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~ 107 (240)
T 3bcv_A 73 GM-------ACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYN 107 (240)
T ss_dssp HH-------HHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHH
T ss_pred HH-------HHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHH
Confidence 11 11111122346889999999998665 444443
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=61.96 E-value=4.8 Score=39.50 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=51.5
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCC-CcE-EEEECCCCCHHH-HHHHHHc---CcEEEEeeecCCCCchhhhh
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSE-YPL-VVAILPDVPEDH-RQILESQ---GCIVREIEPVYPPENQTEFA 87 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~-~~i-~vlv~~~ls~~~-~~~L~~~---~~~i~~v~~~~~~~~~~~~~ 87 (329)
++..+|+ .+-|.. +..+.-++.||+..... ..+ +|+|+++-++.. .+.|+++ ...+.-|. .+++. .+.
T Consensus 112 P~vSVII-p~yNe~-~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~---~~~n~-G~~ 185 (570)
T 2d7i_A 112 PNTSIII-PFHNEG-WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILR---TKKRE-GLI 185 (570)
T ss_dssp CCEEEEE-EESSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEE---CSSCC-CHH
T ss_pred CCeEEEE-EECCCC-HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEE---CCCCC-CHH
Confidence 4555554 333543 56667788898876543 211 345666544444 4555543 22222222 11111 111
Q ss_pred hccccccccceecccccccceeEEEecceeeccC-chhhhCC
Q 020230 88 MAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (329)
Q Consensus 88 ~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf~~ 128 (329)
-+|-...+....|-|++||+|+++..+ |..|.+.
T Consensus 186 -------~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~ 220 (570)
T 2d7i_A 186 -------RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDR 220 (570)
T ss_dssp -------HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHH
T ss_pred -------HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHH
Confidence 111112222346889999999999664 5555553
No 8
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=58.96 E-value=27 Score=31.87 Aligned_cols=99 Identities=17% Similarity=0.246 Sum_probs=54.1
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCCC--cEEEEECCCCCHHHHHHHHHcCcEEEEeeecCC------CCchhhhh------
Q 020230 22 LAGNGDYVKGVVGLAKGLRKAKSEY--PLVVAILPDVPEDHRQILESQGCIVREIEPVYP------PENQTEFA------ 87 (329)
Q Consensus 22 l~~d~~Y~~~a~vli~SL~~~~~~~--~i~vlv~~~ls~~~~~~L~~~~~~i~~v~~~~~------~~~~~~~~------ 87 (329)
++.|.. . +.-++.||++..+.. ..+++..++-.++.++.+++.+.++..+..-+. +++. .+.
T Consensus 9 ~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~-g~~~y~~ia 84 (343)
T 1fo8_A 9 IACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHR-KFQGYYKIA 84 (343)
T ss_dssp EESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCG-GGHHHHHHH
T ss_pred EECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhc-CcccchhHh
Confidence 345665 3 677888998876432 234455666677888888876544433321111 1111 110
Q ss_pred hccccccccceecccccccceeEEEecceeeccCchhhhC
Q 020230 88 MAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFD 127 (329)
Q Consensus 88 ~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~dl~eLf~ 127 (329)
.++ ..... .+++...+++||.||-|+++-.|.=+-|+
T Consensus 85 ~h~-~~al~--~vf~~~~~~~vIiLEDDl~~spdF~~y~~ 121 (343)
T 1fo8_A 85 RHY-RWALG--QIFHNFNYPAAVVVEDDLEVAPDFFEYFQ 121 (343)
T ss_dssp HHH-HHHHH--HHHTTSCCSEEEEEETTEEECTTHHHHHH
T ss_pred HHH-HHHHH--HHHHhccCCEEEEEcCCCeECHHHHHHHH
Confidence 110 00111 12333369999999999999887554443
No 9
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=57.13 E-value=8.6 Score=32.52 Aligned_cols=89 Identities=15% Similarity=0.130 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHc--CcEEEEeeecCCC-----Cchhhhhhccccccccceecc
Q 020230 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQ--GCIVREIEPVYPP-----ENQTEFAMAYYVINYSKLRIW 101 (329)
Q Consensus 30 ~~a~vli~SL~~~~-~~~~i~vlv~~~ls~~~~~~L~~~--~~~i~~v~~~~~~-----~~~~~~~~~~~~~~y~KL~i~ 101 (329)
..+.-++.||.... ++..+ ++++++-+++..+.++++ ...+.-+..-... ++. ... .+|=...
T Consensus 14 ~~l~~~l~Sl~~q~~~~~ei-ivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~-G~~-------~a~N~gi 84 (255)
T 1qg8_A 14 DYVAKSISSILSQTFSDFEL-FIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKT-RYA-------ALINQAI 84 (255)
T ss_dssp TTHHHHHHHHHTCSCCCEEE-EEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSC-HHH-------HHHHHHH
T ss_pred HHHHHHHHHHHhccCCceEE-EEEECCCCchHHHHHHHHhhcCCEEEEeccccccccccccc-CHH-------HHHHHHH
Confidence 33445677877543 34444 356666677777777765 2223222210000 111 111 1111122
Q ss_pred cccccceeEEEecceeeccC-chhhhC
Q 020230 102 EFVEYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 102 ~L~~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
+....|-|++||+|.++..+ |..+.+
T Consensus 85 ~~a~g~~i~~lD~Dd~~~~~~l~~~~~ 111 (255)
T 1qg8_A 85 EMAEGEYITYATDDNIYMPDRLLKMVR 111 (255)
T ss_dssp HHCCCSEEEEEETTEEECTTHHHHHHH
T ss_pred HHcCCCEEEEeCCCCccChHHHHHHHH
Confidence 23357899999999999765 444443
No 10
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=53.49 E-value=36 Score=31.49 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=50.2
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHcCcEEEEee--ecCCCCchhhhhhcc
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQGCIVREIE--PVYPPENQTEFAMAY 90 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~~~~i~vlv~~~ls~~~~~~L~~~~~~i~~v~--~~~~~~~~~~~~~~~ 90 (329)
.+..++.-..-...++..++..+.++... .....++ +|+++=++.+.+.+++.+.++.... .+..+.+.. ..
T Consensus 94 p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EII-VVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G-~g--- 168 (387)
T 3f1y_A 94 LTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQIL-VVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHG-KG--- 168 (387)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEE-EEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCS-HH---
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEE-EEcCcCCccHHHHHHHhCchhcccceeEecCCccCC-HH---
Confidence 44555532222345666666555554333 3355554 5677767778888888887764322 111111110 01
Q ss_pred ccccccceecccccccceeEEEeccee
Q 020230 91 YVINYSKLRIWEFVEYEKMIYLDGDIQ 117 (329)
Q Consensus 91 ~~~~y~KL~i~~L~~ydrVLYLDaD~l 117 (329)
.++-...+....|-|++||+|..
T Consensus 169 ----~A~n~G~~~A~gd~i~~lDaD~~ 191 (387)
T 3f1y_A 169 ----DAMWRALSVTRGDLVLYIDADTR 191 (387)
T ss_dssp ----HHHHHHTTTCCSSEEEECCTTCS
T ss_pred ----HHHHHHHHhcCCCEEEEEcCCCC
Confidence 11111122235799999999998
No 11
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=50.99 E-value=95 Score=27.53 Aligned_cols=188 Identities=16% Similarity=0.231 Sum_probs=89.1
Q ss_pred eCcccH-HHHHHHHHHHHhcC-CCCcEE-EEECCCCCHHHHHHHHHcC-cEEEEeeecCCCCchhhhhhcccccccccee
Q 020230 24 GNGDYV-KGVVGLAKGLRKAK-SEYPLV-VAILPDVPEDHRQILESQG-CIVREIEPVYPPENQTEFAMAYYVINYSKLR 99 (329)
Q Consensus 24 ~d~~Y~-~~a~vli~SL~~~~-~~~~i~-vlv~~~ls~~~~~~L~~~~-~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~ 99 (329)
+-.+|. .-..-.+.|-.++- +++.++ ++.||+.+.- ..+ .++ .+-..|..+.. +. .|...+..|+.
T Consensus 56 a~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~~--p~v-~l~~~r~~~V~~i~~-~~------~W~d~sm~Rm~ 125 (289)
T 1o7q_A 56 AVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRM--PLI-ELGPLRSFKVFKIKP-EK------RWQDISMMRMK 125 (289)
T ss_dssp ECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGC--CCC-CCCTTEEEEEEECCC-CS------SHHHHHHHHHH
T ss_pred EecccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhhC--Ccc-ccCCCCeEEEEEecc-cc------CCchhHHHHHH
Confidence 356888 77888888887763 455543 3556642210 000 011 11112222211 10 11122334432
Q ss_pred c------ccc-cccceeEEEecceeeccCchhhhCCCCCceeeeechhccCCCCCCCCccccccccCCCcc-CCCcccCC
Q 020230 100 I------WEF-VEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV-QWPVEMGS 171 (329)
Q Consensus 100 i------~~L-~~ydrVLYLDaD~lv~~dl~eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~-~~p~~lg~ 171 (329)
+ -++ .++|-+.++|+|+++.+++..= .+ ...+|...-.+-. .....|.-+ +.|... .-|...
T Consensus 126 ~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E-~L-g~lv~~lHp~~y~---~~~~~fpYE---Rrp~S~AyIp~~e-- 195 (289)
T 1o7q_A 126 TIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVE-TL-GESVAQLQAWWYK---ADPNDFTYE---RRKESAAYIPFGE-- 195 (289)
T ss_dssp HHHHHHHHTHHHHCSEEEEECSSEEECSCBCGG-GC-SSEEEEECTTTTT---SCGGGSCCC---CCTTSTTCCCTTC--
T ss_pred HHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHH-HH-HHHHHccCHHHhC---CCCCCCCCC---CCcCceeeecCCC--
Confidence 2 222 3799999999999999987531 11 1123332211100 000001000 111110 001112
Q ss_pred CCCCcccceEEEEecCh--HhHHHHHHHH----hcCCCCCCCChHHHHHHhc--CceeecCCCCCcchh
Q 020230 172 PPPLYFNAGMFVYEPNL--LTYHDLLETV----KVTPPTIFAEQDFLNMYFK--DIYKPIPPTYNLVVA 232 (329)
Q Consensus 172 ~~~~yfNsGVmlin~~~--~~~~~ll~~~----~~~~~~~~~DQdiLN~~f~--~~~~~Lp~~yN~~~~ 232 (329)
..-|+-+|+.==.+.. ..-+.+.+.+ +++-.-.+.|..-||.+|- ...+.|++.|++...
T Consensus 196 -GdfYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd~~ 263 (289)
T 1o7q_A 196 -GDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDYH 263 (289)
T ss_dssp -CSCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCGG
T ss_pred -CCEEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCCcc
Confidence 2468888877555543 1112222221 2222346799999999963 346889999998765
No 12
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=49.55 E-value=20 Score=33.79 Aligned_cols=23 Identities=13% Similarity=0.315 Sum_probs=17.7
Q ss_pred ccceeEEEecceeeccC-chhhhC
Q 020230 105 EYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 105 ~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
..|-|++||+|+++..+ |..|.+
T Consensus 114 ~gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 114 RGQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp CSSEEEEEESSEEECTTCHHHHHH
T ss_pred cCCeEEEECCCeEeCccHHHHHHH
Confidence 47899999999998765 555554
No 13
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=45.09 E-value=67 Score=31.25 Aligned_cols=100 Identities=13% Similarity=0.056 Sum_probs=51.1
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcE-EEEECCCCCHHHHHHHHHcCc--EEEEeeecCCCCchhhhhhcc
Q 020230 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPL-VVAILPDVPEDHRQILESQGC--IVREIEPVYPPENQTEFAMAY 90 (329)
Q Consensus 14 ~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~~~~~i-~vlv~~~ls~~~~~~L~~~~~--~i~~v~~~~~~~~~~~~~~~~ 90 (329)
++..+++ .+-|. ...+..++.||.......++ +++++++-+++..+.++++.. .+..+..- .... ....
T Consensus 93 p~vsviI-p~~n~--~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~--~~~~-g~~~-- 164 (625)
T 2z86_A 93 DGLSIVI-PTYNR--AKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQK--DYGY-QLCA-- 164 (625)
T ss_dssp CCEEEEE-EESSC--HHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEEC--CCSC-CHHH--
T ss_pred CcEEEEE-ecCCc--HHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeC--CCCc-chhH--
Confidence 3455553 22344 45666788999876432233 335566556667777776532 22222211 1110 0110
Q ss_pred ccccccceecccccccceeEEEecceeeccC-chhhh
Q 020230 91 YVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 91 ~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf 126 (329)
.+-...+....|-|++||+|+++..+ |..+.
T Consensus 165 -----a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~ 196 (625)
T 2z86_A 165 -----VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYM 196 (625)
T ss_dssp -----HHHHHHHHCCSSEEEEECTTEEECTTHHHHHH
T ss_pred -----HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHH
Confidence 11111222357899999999999655 34443
No 14
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=45.02 E-value=43 Score=29.81 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=55.2
Q ss_pred CCCeEEEEEeeeCcccHHHHHHHHHHHHhcC-CC-CcEEEEECCCCCHHHHHHHHHcCcEEEE-eeecC-CCCchhhhhh
Q 020230 13 VPKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SE-YPLVVAILPDVPEDHRQILESQGCIVRE-IEPVY-PPENQTEFAM 88 (329)
Q Consensus 13 ~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~~-~~-~~i~vlv~~~ls~~~~~~L~~~~~~i~~-v~~~~-~~~~~~~~~~ 88 (329)
..+..+++- +-|.. ..+..++.||.... +. ..++ +++++-++...+.+++.+.++.. +..+. ..++.. ..
T Consensus 47 ~~~vSViIp-~yN~~--~~l~~~l~sl~~q~~~~~~eii-vVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G-~~- 120 (329)
T 3ckj_A 47 GRTISVVLP-ALDEE--DTIGSVIDSISPLVDGLVDELI-VLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPG-KG- 120 (329)
T ss_dssp TCCEEEEEE-ESSCT--TTHHHHHHHHGGGBTTTBSEEE-EEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCS-HH-
T ss_pred CCcEEEEEe-eCCCH--HHHHHHHHHHHHhhCCCCcEEE-EEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCC-HH-
Confidence 345555542 23432 33456677887654 32 4444 56777677788888888776542 22221 111111 11
Q ss_pred ccccccccceecccccccceeEEEeccee-eccC-chhhhC
Q 020230 89 AYYVINYSKLRIWEFVEYEKMIYLDGDIQ-VFDN-IDHLFD 127 (329)
Q Consensus 89 ~~~~~~y~KL~i~~L~~ydrVLYLDaD~l-v~~d-l~eLf~ 127 (329)
.++-...+....|-|++||+|.+ +..+ |..+.+
T Consensus 121 ------~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~ 155 (329)
T 3ckj_A 121 ------EALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVG 155 (329)
T ss_dssp ------HHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHH
T ss_pred ------HHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHH
Confidence 11111112235689999999999 6544 566554
No 15
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=41.34 E-value=79 Score=28.85 Aligned_cols=115 Identities=23% Similarity=0.277 Sum_probs=70.5
Q ss_pred CCCCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHc--C-cEEEEeee--cCCCCc-
Q 020230 12 NVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KS--EYPLVVAILPDVPEDHRQILESQ--G-CIVREIEP--VYPPEN- 82 (329)
Q Consensus 12 ~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~--~~~i~vlv~~~ls~~~~~~L~~~--~-~~i~~v~~--~~~~~~- 82 (329)
.+.+-|+|+ |+-|. =+.+++-+|+||..+ |. .||.++|-....+++-++.++++ | +++..|.. ...|+.
T Consensus 25 ~r~nAtfV~-L~RN~-el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P~~I 102 (348)
T 1s4n_A 25 GKPKACYVT-LVRNK-ELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEWI 102 (348)
T ss_dssp SCCCEEEEE-ECCGG-GHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCCTTS
T ss_pred CCCceEEEE-EeccH-HHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCCCCc
Confidence 367888887 55554 488999999999753 43 58888776667999988888764 2 33333332 122221
Q ss_pred -hhhhh------h---cc----ccccccce---e---cccccccceeEEEecceeeccCch-hhhCC
Q 020230 83 -QTEFA------M---AY----YVINYSKL---R---IWEFVEYEKMIYLDGDIQVFDNID-HLFDA 128 (329)
Q Consensus 83 -~~~~~------~---~~----~~~~y~KL---~---i~~L~~ydrVLYLDaD~lv~~dl~-eLf~~ 128 (329)
..... . .+ +.....|+ + -+.|.+||-.-=++.|+-+..||+ ++|..
T Consensus 103 d~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~ 169 (348)
T 1s4n_A 103 NQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKW 169 (348)
T ss_dssp CHHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHH
T ss_pred CHHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHH
Confidence 11110 0 00 00011222 1 233558999999999999999998 77764
No 16
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=41.24 E-value=1.5e+02 Score=26.38 Aligned_cols=187 Identities=13% Similarity=0.182 Sum_probs=86.9
Q ss_pred eCcccHHHHHHHHHHHHhcC-CCCcEE-EEECCCCCHHHHHHHH-HcCcEEEEeeecCCCCchhhhhhccccccccceec
Q 020230 24 GNGDYVKGVVGLAKGLRKAK-SEYPLV-VAILPDVPEDHRQILE-SQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRI 100 (329)
Q Consensus 24 ~d~~Y~~~a~vli~SL~~~~-~~~~i~-vlv~~~ls~~~~~~L~-~~~~~i~~v~~~~~~~~~~~~~~~~~~~~y~KL~i 100 (329)
+-.+|+.-..-.+.|-.++- +++.++ ++.||+.+.- ..+. .-+.++. |-.+.. + ..|...+..|+.+
T Consensus 66 A~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~~v--P~v~l~~~r~~~-V~~v~~-~------~~Wqd~sm~Rm~~ 135 (298)
T 3ioh_A 66 AIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAV--PRVTLGTGRQLS-VLEVRA-Y------KRWQDVSMRRMEM 135 (298)
T ss_dssp ECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGGS--CCCCCCTTEEEE-EEECCC-C------SSHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHHhHHHhccCCceEEEEEEeCChhhC--CccccCCCCeEE-EEEecc-c------cCCccccHHHHHH
Confidence 34678877777888887763 555543 3556652210 0000 0011222 111111 0 0111223444433
Q ss_pred cc-------ccccceeEEEecceeeccCchh-hhCCCCCceeeeechhccCCCCCCCCccccccccCCCcc-CCCcccCC
Q 020230 101 WE-------FVEYEKMIYLDGDIQVFDNIDH-LFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV-QWPVEMGS 171 (329)
Q Consensus 101 ~~-------L~~ydrVLYLDaD~lv~~dl~e-Lf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~-~~p~~lg~ 171 (329)
.. +-++|-+..+|+|+++.+++.. .+ ...+|...--+ . +.+.....+ .+.|... .-|...|
T Consensus 136 i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG~E~L---g~lva~lHp~~----y-~~~~~~FpY-ERrp~S~AyIp~~eG- 205 (298)
T 3ioh_A 136 ISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEIL---TPLFGTLHPGF----Y-GSSREAFTY-ERRPQSQAYIPKDEG- 205 (298)
T ss_dssp HHHHHHHTHHHHCSEEEEEESSEEECSCBCGGGC---SSEEEEBCTTT----T-TSCGGGSCC-CCCTTSTTCCCTTCC-
T ss_pred HHHHHHHHHhhcCCEEEEecCCCeeccCccHHHh---HhhHhhcChhh----h-cCCcccCcc-cCCccccccccCCCC-
Confidence 31 2368999999999999998652 11 11122211100 0 000000000 0111100 0011122
Q ss_pred CCCCcccceEEEEecCh--HhHHHHHHHH----hcCCCCCCCChHHHHHHhc--CceeecCCCCCcchh
Q 020230 172 PPPLYFNAGMFVYEPNL--LTYHDLLETV----KVTPPTIFAEQDFLNMYFK--DIYKPIPPTYNLVVA 232 (329)
Q Consensus 172 ~~~~yfNsGVmlin~~~--~~~~~ll~~~----~~~~~~~~~DQdiLN~~f~--~~~~~Lp~~yN~~~~ 232 (329)
.-|+-+|+.==.+.. ..-+.+.+.+ +++-.-.+.|..-||.+|- .-.+.|++.|++...
T Consensus 206 --dfYY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hKPtKvLSPEY~Wd~~ 272 (298)
T 3ioh_A 206 --DFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPEYLWDQQ 272 (298)
T ss_dssp --SCCBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCHH
T ss_pred --CeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcCCCceeCHHHcCCcc
Confidence 367777777544443 1112222211 1222346799999999985 346899999998764
No 17
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=27.73 E-value=95 Score=30.13 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=49.4
Q ss_pred CCCCCCeEEEEEeeeCcccHHHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHc---CcEEEEeeecCCCCchhh
Q 020230 10 IMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTE 85 (329)
Q Consensus 10 ~~~~~~~a~vT~l~~d~~Y~~~a~vli~SL~~~-~~~~~i~vlv~~~ls~~~~~~L~~~---~~~i~~v~~~~~~~~~~~ 85 (329)
++...++++++...-...++ .-++.||+.. .++..++ +++++-++...+.+++. ...+.-+.. . +. .
T Consensus 371 ~~~~~~vsiii~~yn~~~~l---~~~l~s~~~q~~~~~eii-vvdd~S~d~t~~~~~~~~~~~~~i~~~~~--~--n~-G 441 (625)
T 2z86_A 371 LKRVPLVSIYIPAYNCSKYI---VRCVESALNQTITDLEVC-ICDDGSTDDTLRILQEHYANHPRVRFISQ--K--NK-G 441 (625)
T ss_dssp CCSSCSEEEEEEESSCTTTH---HHHHHHHHSSSCCSEEEE-EEEESCSSSHHHHHHHHHTTCTTEEEEEE--C--CC-C
T ss_pred hccCCeEEEEEeCCCCHHHH---HHHHHHHHhCcCCCeEEE-EEECcCChhHHHHHHHHHhhCCcEEEEeC--C--CC-C
Confidence 34455666665322233444 4567787754 3344443 55555555566666653 222322221 1 11 1
Q ss_pred hhhccccccccceecccccccceeEEEecceeeccC-chhhh
Q 020230 86 FAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (329)
Q Consensus 86 ~~~~~~~~~y~KL~i~~L~~ydrVLYLDaD~lv~~d-l~eLf 126 (329)
+.. .+-...+....|-|++||+|.++..+ |..+.
T Consensus 442 ~~~-------a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~ 476 (625)
T 2z86_A 442 IGS-------ASNTAVRLCRGFYIGQLDSDDFLEPDAVELCL 476 (625)
T ss_dssp HHH-------HHHHHHHHCCSSEEEECCTTCEECTTHHHHHH
T ss_pred HHH-------HHHHHHHhcCCCEEEEECCCcccChhHHHHHH
Confidence 111 11111122346889999999998665 44444
No 18
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=26.48 E-value=1.5e+02 Score=27.93 Aligned_cols=24 Identities=13% Similarity=0.423 Sum_probs=18.0
Q ss_pred cccceeEEEecceeeccC-chhhhC
Q 020230 104 VEYEKMIYLDGDIQVFDN-IDHLFD 127 (329)
Q Consensus 104 ~~ydrVLYLDaD~lv~~d-l~eLf~ 127 (329)
...|-|++||+|+.+..+ |..|.+
T Consensus 145 A~gd~i~flD~D~~~~p~~L~~ll~ 169 (501)
T 2ffu_A 145 AQAKVLTFLDSHCECNEHWLEPLLE 169 (501)
T ss_dssp CCSSEEEECCSSEEECTTCHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHH
Confidence 357889999999998764 555554
No 19
>2l9x_A Uncharacterized protein; thioether bridges, helical loops, crosslinked, post-translat modified, antimicrobial protein; HET: DTH; NMR {Bacillus cereus 95}
Probab=22.75 E-value=18 Score=19.74 Aligned_cols=14 Identities=57% Similarity=0.570 Sum_probs=10.7
Q ss_pred Cccccccchhhhcc
Q 020230 301 NSEKIGSLFVTALS 314 (329)
Q Consensus 301 ~~~~~~~~~~~~~~ 314 (329)
-||.||||.-||..
T Consensus 15 isegigslvgtaft 28 (30)
T 2l9x_A 15 ISEGIGSLVGTAFT 28 (30)
T ss_dssp HHTCSCHHHHTTTT
T ss_pred EeccccceeeeeEe
Confidence 37889999888753
Done!