Query 020233
Match_columns 329
No_of_seqs 209 out of 1215
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 13:48:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.6E-78 8.9E-83 573.2 26.3 319 1-323 4-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 8.2E-72 2.8E-76 521.1 19.0 280 39-328 2-305 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.5E-71 2.9E-75 513.6 23.4 272 38-317 4-309 (312)
4 1odm_A Isopenicillin N synthas 100.0 5.8E-67 2E-71 491.3 24.4 267 37-318 5-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 2E-67 7E-72 490.2 19.7 266 38-320 2-308 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 4.5E-61 1.5E-65 441.1 21.3 245 39-317 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 89.9 1.1 3.8E-05 39.1 8.2 97 170-278 74-194 (243)
8 2hbt_A EGL nine homolog 1; pro 87.0 12 0.00041 32.5 13.0 37 59-96 14-50 (247)
9 2jig_A Prolyl-4 hydroxylase; h 60.3 16 0.00055 30.9 6.1 28 252-279 189-217 (224)
10 4ay7_A Methylcobalamin\: coenz 51.9 22 0.00077 32.2 5.9 47 49-98 298-348 (348)
11 3itq_A Prolyl 4-hydroxylase, a 49.4 34 0.0012 28.9 6.3 74 198-278 112-211 (216)
12 1m5a_B Insulin B chain; alpha 47.9 19 0.00066 20.4 2.9 18 59-76 10-27 (30)
13 2rg4_A Uncharacterized protein 47.7 1.2E+02 0.0042 25.3 12.1 24 258-281 185-209 (216)
14 2dbn_A Hypothetical protein YB 45.7 11 0.00036 35.9 2.6 54 38-98 98-151 (461)
15 3o2g_A Gamma-butyrobetaine dio 45.7 9 0.00031 35.6 2.2 52 40-99 122-173 (388)
16 2opi_A L-fuculose-1-phosphate 45.3 12 0.00042 31.4 2.8 36 40-81 125-160 (212)
17 3rcq_A Aspartyl/asparaginyl be 43.2 26 0.00089 29.3 4.5 63 215-282 114-187 (197)
18 1e4c_P L-fuculose 1-phosphate 38.8 16 0.00056 30.7 2.6 36 40-81 122-157 (215)
19 3i3q_A Alpha-ketoglutarate-dep 37.8 87 0.003 26.3 7.0 72 198-277 106-201 (211)
20 2iuw_A Alkylated repair protei 36.6 1.3E+02 0.0044 25.6 8.1 74 198-277 127-228 (238)
21 2fk5_A Fuculose-1-phosphate al 35.3 22 0.00075 29.6 2.8 51 40-96 117-176 (200)
22 1pvt_A Sugar-phosphate aldolas 34.6 26 0.00089 30.0 3.2 51 39-95 160-212 (238)
23 3s57_A Alpha-ketoglutarate-dep 34.5 1E+02 0.0036 25.5 7.0 73 198-276 101-200 (204)
24 1otj_A Alpha-ketoglutarate-dep 31.7 39 0.0013 29.4 4.0 49 39-96 16-64 (283)
25 1otf_A 4-oxalocrotonate tautom 31.1 35 0.0012 21.9 2.7 29 42-70 1-29 (62)
26 2opa_A Probable tautomerase YW 30.0 37 0.0013 21.6 2.7 29 42-70 1-29 (61)
27 2v9l_A Rhamnulose-1-phosphate 29.4 25 0.00085 30.9 2.2 50 40-95 179-230 (274)
28 3m20_A 4-oxalocrotonate tautom 29.0 58 0.002 21.1 3.6 28 42-70 1-28 (62)
29 2x4k_A 4-oxalocrotonate tautom 27.8 49 0.0017 21.0 3.1 24 162-185 17-40 (63)
30 2da7_A Zinc finger homeobox pr 26.4 28 0.00095 24.1 1.5 39 151-189 14-52 (71)
31 2irp_A Putative aldolase class 26.1 30 0.001 28.9 2.0 50 39-95 138-192 (208)
32 3ry0_A Putative tautomerase; o 25.5 49 0.0017 21.6 2.7 29 42-70 1-29 (65)
33 4exq_A UPD, URO-D, uroporphyri 25.3 1.1E+02 0.0038 27.9 6.0 45 52-96 309-358 (368)
34 3abf_A 4-oxalocrotonate tautom 25.3 50 0.0017 21.2 2.7 23 163-185 16-38 (64)
35 1oih_A Putative alkylsulfatase 24.8 59 0.002 28.5 3.9 51 39-98 26-77 (301)
36 2ww6_A Fibritin, T4 fibritin; 24.7 63 0.0022 17.7 2.4 13 235-247 11-23 (27)
37 2z7b_A MLR6791 protein; class 23.7 58 0.002 28.4 3.6 52 40-95 157-217 (270)
38 3pvj_A Alpha-ketoglutarate-dep 23.4 62 0.0021 28.2 3.7 50 39-97 14-63 (277)
39 1r3s_A URO-D, uroporphyrinogen 23.3 1.2E+02 0.0042 27.4 5.9 45 52-96 312-360 (367)
40 1gyx_A YDCE, B1461, hypothetic 23.0 71 0.0024 21.7 3.2 30 42-71 1-31 (76)
41 3m21_A Probable tautomerase HP 22.5 68 0.0023 21.1 3.0 28 42-69 1-31 (67)
42 1zav_A 50S ribosomal protein L 22.3 1.9E+02 0.0065 23.3 6.3 41 55-95 6-47 (180)
43 2j01_J 50S ribosomal protein L 21.2 2E+02 0.0067 23.1 6.1 39 56-94 5-45 (173)
44 2p17_A Pirin-like protein; GK1 20.6 61 0.0021 28.5 3.0 21 210-230 48-68 (277)
45 3ocr_A Class II aldolase/adduc 20.5 56 0.0019 28.7 2.8 52 39-95 155-208 (273)
46 3mb2_A 4-oxalocrotonate tautom 20.3 67 0.0023 21.5 2.6 29 42-70 2-30 (72)
47 2vf9_A Coat protein; virion, R 20.3 20 0.00069 26.0 -0.1 16 249-264 51-66 (131)
48 1e5r_A Proline oxidase; oxidor 20.1 1.1E+02 0.0039 27.0 4.7 72 197-277 92-175 (290)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.6e-78 Score=573.25 Aligned_cols=319 Identities=33% Similarity=0.547 Sum_probs=282.8
Q ss_pred ChhhhhhhhcCCCCCCCCCCcCCCCCCCccccc--CC--CCCCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEE
Q 020233 1 MACVKALAESPGLTSIPSTYNFTQNQHDHEAVS--EI--DPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTV 76 (329)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~--~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l 76 (329)
+++|++|+++ ++.+||++|++|+++++..... .. ....+||||||+.|.++++++|.+++++|.+||++||||||
T Consensus 4 ~~~v~~l~~~-~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 4 VERVESLAKS-GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCHHHHHHT-TCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred cccHHHHHhc-CCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 5789999985 7899999999998877653100 00 01246999999999877777788999999999999999999
Q ss_pred EcCCCChHHHHHHHHHHHHHhcCCHHHHHHhhccCC-CCCcccccCcccCcccccchhhhccccCCC-----CCCCCCCC
Q 020233 77 INHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHV-LDPIRCGTSFNASVEKVFFWRDFLKVFVHP-----EFHSPNKP 150 (329)
Q Consensus 77 ~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p-----~~~wP~~~ 150 (329)
+|||||.++++++++.+++||+||.|+|+++..... ...+||+........+..||+|.|.+...| .|.||+.+
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~ 162 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 162 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence 999999999999999999999999999999965443 356889866544456688999999887543 47799999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhhHHhhhccC---CCceeEEEEeeCCCCCCCcccccCCccCCCceeE
Q 020233 151 VGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLD---SGLQILVANLYPPCPQPELAMGMPPHSDHGLLTL 227 (329)
Q Consensus 151 ~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~---~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTl 227 (329)
|+|++.+++|+++|.+|+.+||++||++|||++++|.+. +. .+.+.||++|||||+.++..+|+++|||+|+|||
T Consensus 163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~--~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl 240 (356)
T 1gp6_A 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKE--VGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 240 (356)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHH--TTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH--hcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEE
Confidence 999999999999999999999999999999999999998 54 4678899999999999888999999999999999
Q ss_pred EeeCCCCceEEEeCCeEEEee---------------eeccCcccccccccccCCCCceEEEEEeeCCCCCC-eeecChhh
Q 020233 228 LTQNGICGLQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDT-VVEPSKEL 291 (329)
Q Consensus 228 L~qd~~~GLqV~~~g~W~~V~---------------~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~~~ 291 (329)
|+||+++||||+++|+|++|+ +||||+||||.|||+.+++.+|||++||++|+.|+ +|.|+++|
T Consensus 241 L~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~ 320 (356)
T 1gp6_A 241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM 320 (356)
T ss_dssp EEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred EEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence 999999999999999999999 99999999999999998888999999999999999 99999999
Q ss_pred hccCCCCCCCccccHHHHHHHHHhccCCCCcc
Q 020233 292 IERQSEAPAYIGIKYKDFLELQQSNQLDNKSV 323 (329)
Q Consensus 292 ~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~ 323 (329)
+++ ++|++|+++|++||+..++.++++++..
T Consensus 321 ~~~-~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 321 VSV-ESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp CCS-SSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred cCC-CCCccCCCccHHHHHHHHHHhccCcchh
Confidence 998 8999999999999999999888776543
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8.2e-72 Score=521.11 Aligned_cols=280 Identities=27% Similarity=0.530 Sum_probs=244.8
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHHHhhccCCCCCccc
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRC 118 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~gy 118 (329)
.+||||||+.+. ++++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ..||
T Consensus 2 ~~iPvIDls~l~---~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy 74 (319)
T 1w9y_A 2 ENFPIISLDKVN---GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKAL 74 (319)
T ss_dssp CCCCEEEGGGGG---STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
T ss_pred CCCCEEECcccC---cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCC
Confidence 479999999884 235778999999999999999999999999999999999999999999999998532 3477
Q ss_pred ccCcccCcccccchhhhccccCCC---CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhhHHhhhcc-CC
Q 020233 119 GTSFNASVEKVFFWRDFLKVFVHP---EFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNL-DS 194 (329)
Q Consensus 119 ~~~~~~~~~~~~d~~e~~~~~~~p---~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~-~~ 194 (329)
+... ...+..||+|.|.+...| .|.||+.+|+||+.+++|+++|.+|+.+|+++||++|||++++|.+.+.. +.
T Consensus 75 ~~~~--~e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 75 EGVQ--AEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp TTCC--CCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred Cccc--ccCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 5431 234678999999887544 46899999999999999999999999999999999999999999998422 13
Q ss_pred CceeEEEEeeCCCCCCCcccccCCccCCCceeEEeeC-CCCceEEEeCCeEEEee---------------eeccCccccc
Q 020233 195 GLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQN-GICGLQLLHNGKWVNVN---------------ILSNGKYKSV 258 (329)
Q Consensus 195 ~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~---------------~~TnG~~kS~ 258 (329)
+.+.||+||||||+.++..+|+++|||+|+||||+|| +++||||.++|+|++|+ +||||+||||
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~ 232 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSV 232 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecc
Confidence 5678999999999998889999999999999999995 79999999999999999 9999999999
Q ss_pred ccccccCCCCceEEEEEeeCCCCCCeeecChhhhccCC---CCCCCccccHHHHHHHHHhccCCCCcc-ccccc
Q 020233 259 VHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQS---EAPAYIGIKYKDFLELQQSNQLDNKSV-LDRVR 328 (329)
Q Consensus 259 ~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~---~p~~y~~~t~~ey~~~~~~~~~~~~~~-~~~~~ 328 (329)
.|||+.+++.+|||++||++|+.|++|.|+++|+++ + +|++|+++|++||+..+++..+.++.. ++.++
T Consensus 233 ~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~-~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 305 (319)
T 1w9y_A 233 MHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEK-EAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK 305 (319)
T ss_dssp CEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC---------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred cceecCCCCCCceEEEEEecCCCCCeEeCchhhcCc-ccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHH
Confidence 999999888899999999999999999999999998 7 599999999999999999998877653 45443
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.5e-71 Score=513.56 Aligned_cols=272 Identities=21% Similarity=0.305 Sum_probs=240.3
Q ss_pred CCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHHHhhccCCCCCcc
Q 020233 38 EDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIR 117 (329)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~g 117 (329)
+.+||||||+.+.+ ++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ....+|
T Consensus 4 ~~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~G 78 (312)
T 3oox_A 4 TSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARG 78 (312)
T ss_dssp CCSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSE
T ss_pred CCCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccc
Confidence 56899999998742 5678999999999999999999999999999999999999999999999999654 445678
Q ss_pred cccCccc--CcccccchhhhccccC-----------CCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhHcCCChh
Q 020233 118 CGTSFNA--SVEKVFFWRDFLKVFV-----------HPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFC 184 (329)
Q Consensus 118 y~~~~~~--~~~~~~d~~e~~~~~~-----------~p~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 184 (329)
|...... ...+..||+|.|.++. .++|.||+.+|+||+.+++|+++|.+|+.+|+++||++|||+++
T Consensus 79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 158 (312)
T 3oox_A 79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD 158 (312)
T ss_dssp EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence 8543221 2235689999998753 12578999999999999999999999999999999999999999
Q ss_pred hHHhhhccCCCceeEEEEeeCCCCCCCcccccCCccCCCceeEEeeCCCCceEEE-eCCeEEEee---------------
Q 020233 185 YIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLL-HNGKWVNVN--------------- 248 (329)
Q Consensus 185 ~f~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~--------------- 248 (329)
+|.+. +..+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+
T Consensus 159 ~f~~~--~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 159 FFKPT--VQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp TTHHH--HTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred HHHHH--hcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence 99998 566678999999999988655699999999999999999999999997 589999999
Q ss_pred eeccCcccccccccccCC----CCceEEEEEeeCCCCCCeeecChhhhccCCCCCCCc-cccHHHHHHHHHhcc
Q 020233 249 ILSNGKYKSVVHRAVVNN----KMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYI-GIKYKDFLELQQSNQ 317 (329)
Q Consensus 249 ~~TnG~~kS~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~p~~y~-~~t~~ey~~~~~~~~ 317 (329)
+||||+||||.|||+.++ +.+|||++||++|+.|++|.|+++|+++ ++|++|+ ++|++||+..+++..
T Consensus 237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~-~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTA-ENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCS-SSCCSCSSCEEHHHHHHHHHHHH
T ss_pred HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCC-CCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999999998764 4679999999999999999999999999 8999999 999999999998753
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=5.8e-67 Score=491.31 Aligned_cols=267 Identities=22% Similarity=0.317 Sum_probs=238.8
Q ss_pred CCCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHH-hcCCHHHHHHhhccCCCCC
Q 020233 37 PEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRF-FNLTEEEKREFAGKHVLDP 115 (329)
Q Consensus 37 ~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~ 115 (329)
+..+||||||+.|.++++++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 5 ~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------ 75 (331)
T 1odm_A 5 SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------ 75 (331)
T ss_dssp CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------
T ss_pred cCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------
Confidence 346799999999987887788999999999999999999999999 899999999999 9999999999954
Q ss_pred cccccCccc--Cc------ccccchhhhccccCC---------------CCCCCCCC--CcchHHHHHHHHHHHHHHHHH
Q 020233 116 IRCGTSFNA--SV------EKVFFWRDFLKVFVH---------------PEFHSPNK--PVGFSEISLEYCKRIRQVARE 170 (329)
Q Consensus 116 ~gy~~~~~~--~~------~~~~d~~e~~~~~~~---------------p~~~wP~~--~~~f~~~~~~y~~~~~~l~~~ 170 (329)
+||...... .. .+..||+|.|.+... .+|.||+. +|+|++.+++|+++|.+|+.+
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 466532211 11 257899999988742 25789987 999999999999999999999
Q ss_pred HHHHHHhHcCCChhhHHhhhccCCCceeEE--EEeeC------C---CCCCCc-ccccCCccCCCceeEEeeCCCCceEE
Q 020233 171 LLKGISESLGLEFCYIERAMNLDSGLQILV--ANLYP------P---CPQPEL-AMGMPPHSDHGLLTLLTQNGICGLQL 238 (329)
Q Consensus 171 ll~~la~~Lgl~~~~f~~~~~~~~~~~~lr--l~~Yp------p---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLqV 238 (329)
|+++||++|||++++|.+. ++.+.+.|| ++||| | |+.++. .+|+++|||+|+||||+||+++||||
T Consensus 156 ll~~la~~Lgl~~~~f~~~--~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV 233 (331)
T 1odm_A 156 LLKGYALALGKEENFFARH--FKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV 233 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGG--CCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEE
T ss_pred HHHHHHHHhCCCHHHHHHH--hcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEE
Confidence 9999999999999999998 666778999 99999 7 777776 89999999999999999999999999
Q ss_pred E-eCCeEEEee---------------eeccCcccccccccccCCCCceEEEEEeeCCCCCCeeecChhhhccCCCCCCCc
Q 020233 239 L-HNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYI 302 (329)
Q Consensus 239 ~-~~g~W~~V~---------------~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~p~~y~ 302 (329)
+ ++| |++|+ +||||+||||.|||+. ++.+|||++||++|+.|++|.|+++++++ ++ ++|+
T Consensus 234 ~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~-~~-~~y~ 309 (331)
T 1odm_A 234 ETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPN-GK-SDRE 309 (331)
T ss_dssp EETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTT-CC-CSSC
T ss_pred EcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccc-cc-cCCC
Confidence 9 588 99999 9999999999999986 47899999999999999999999999988 77 8999
Q ss_pred cccHHHHHHHHHhccC
Q 020233 303 GIKYKDFLELQQSNQL 318 (329)
Q Consensus 303 ~~t~~ey~~~~~~~~~ 318 (329)
++|++||+..++++.+
T Consensus 310 ~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 310 PLSYGDYLQNGLVSLI 325 (331)
T ss_dssp CCBHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH
Confidence 9999999999988764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2e-67 Score=490.22 Aligned_cols=266 Identities=17% Similarity=0.212 Sum_probs=225.5
Q ss_pred CCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhcCC-HHHHHHhhccCCCCCc
Q 020233 38 EDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLT-EEEKREFAGKHVLDPI 116 (329)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~ 116 (329)
+.+||||||+.+.+++.+ ++|.+||++||||||+|||||.++++++++++++||+|| .|+|+++........+
T Consensus 2 ~~~iPvIDls~l~~~~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCCEEEHHHHHTTCSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCCcEEEchhhcCCCHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 357999999987654431 289999999999999999999999999999999999999 9999999765445678
Q ss_pred ccccCccc------CcccccchhhhccccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhHcCC----ChhhH
Q 020233 117 RCGTSFNA------SVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGL----EFCYI 186 (329)
Q Consensus 117 gy~~~~~~------~~~~~~d~~e~~~~~~~p~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~~f 186 (329)
||+..... ...+..||+|.|.+... +|.|| +|+|++.+++|+++|.+|+.+|+++|+++||| ++++|
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~-~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA-DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp EEEEC-----------------CEEEEECSS-SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC-CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 99765432 23467899999999865 68899 89999999999999999999999999999999 88888
Q ss_pred HhhhccCCCceeEEEEeeCCCCCCC--c--ccccCCccCCCceeEEeeC-CCCc---eEEEeCCeEEEee----------
Q 020233 187 ERAMNLDSGLQILVANLYPPCPQPE--L--AMGMPPHSDHGLLTLLTQN-GICG---LQLLHNGKWVNVN---------- 248 (329)
Q Consensus 187 ~~~~~~~~~~~~lrl~~Ypp~~~~~--~--~~g~~~HtD~g~lTlL~qd-~~~G---LqV~~~g~W~~V~---------- 248 (329)
.+. .+.||++|||||+.++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+
T Consensus 153 ~~~------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 153 LDC------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp HSC------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEE
T ss_pred hhc------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEH
Confidence 754 5789999999998764 3 6789999999999999999 8999 9999999999999
Q ss_pred -----eeccCcccccccccccCC-----CCceEEEEEeeCCCCCCeeecChhhhccCCCCCCC--ccccHHHHHHHHHhc
Q 020233 249 -----ILSNGKYKSVVHRAVVNN-----KMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAY--IGIKYKDFLELQQSN 316 (329)
Q Consensus 249 -----~~TnG~~kS~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~p~~y--~~~t~~ey~~~~~~~ 316 (329)
+||||+||||.|||+.++ +.+||||+||++|+.|++|. +++|+++ ++|++| +++|++||+..++++
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~-~~p~~y~~~~~t~~ey~~~~~~~ 304 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLAREC-GFDVSLDGETATFQDWIGGNYVN 304 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHT-TCCCCCCSSEEEHHHHHCSSCCC
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCC-CCccccCCCCccHHHHHHHHHHH
Confidence 999999999999999987 67999999999999999999 9999998 899999 999999999998887
Q ss_pred cCCC
Q 020233 317 QLDN 320 (329)
Q Consensus 317 ~~~~ 320 (329)
.+..
T Consensus 305 ~~~~ 308 (311)
T 1dcs_A 305 IRRT 308 (311)
T ss_dssp EECC
T ss_pred Hhcc
Confidence 6643
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=4.5e-61 Score=441.08 Aligned_cols=245 Identities=23% Similarity=0.305 Sum_probs=207.5
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHHHhhccCCCCCccc
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRC 118 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~gy 118 (329)
.+||||||+.. +.+++|.+||++||||||+|||||.++++++++.+++||+| |+|+++... +...+||
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~-~~~~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFN-RETHDGF 69 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCC-TTTCCEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccC-CCCCCcc
Confidence 36999999963 35789999999999999999999999999999999999998 789998543 4456899
Q ss_pred ccCc-c--cCcccccchhhhccccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhHcCCCh--hh---HHhhh
Q 020233 119 GTSF-N--ASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEF--CY---IERAM 190 (329)
Q Consensus 119 ~~~~-~--~~~~~~~d~~e~~~~~~~p~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---f~~~~ 190 (329)
.... . .......||+|.|.+. .||..+++||+.+++|+++|.+|+.+||++||++||++. ++ |.+.
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~-----p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~- 143 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY-----PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEM- 143 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC-----TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHH-
T ss_pred ccCccccccCCCCcccHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHH-
Confidence 7543 1 1223468999998874 478888999999999999999999999999999999863 33 5555
Q ss_pred ccCCC-ceeEEEEeeCCCCCCC--cccccCCccCCCceeEEeeCCCCceEEE-eCCeEEEee---------------eec
Q 020233 191 NLDSG-LQILVANLYPPCPQPE--LAMGMPPHSDHGLLTLLTQNGICGLQLL-HNGKWVNVN---------------ILS 251 (329)
Q Consensus 191 ~~~~~-~~~lrl~~Ypp~~~~~--~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~---------------~~T 251 (329)
++++ .+.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+ +||
T Consensus 144 -~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 222 (280)
T 3on7_A 144 -IANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 (280)
T ss_dssp -HTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHT
T ss_pred -hcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHh
Confidence 4444 4789999999998765 4789999999999999999999999998 589999999 999
Q ss_pred cCcccccccccccCC----CCceEEEEEeeCCCCCCeeecChhhhccCCCCCCCccccHHHHHHHHHhcc
Q 020233 252 NGKYKSVVHRAVVNN----KMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQ 317 (329)
Q Consensus 252 nG~~kS~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~p~~y~~~t~~ey~~~~~~~~ 317 (329)
||+||||.|||+.++ ..+|||++||++|+.|++|.| ++|++||+.+|++..
T Consensus 223 ng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p---------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 223 DGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE---------------RYTADSYLMERLREL 277 (280)
T ss_dssp TTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS---------------SCBHHHHHHHHHHHT
T ss_pred CCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC---------------CccHHHHHHHHHHHh
Confidence 999999999998864 458999999999999999974 499999999998863
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=89.86 E-value=1.1 Score=39.14 Aligned_cols=97 Identities=15% Similarity=0.055 Sum_probs=53.8
Q ss_pred HHHHHHHhHcCCChhhHHhhhccCCCceeEEEEeeCCCCCCCcccccCCccCCC-----------ceeEEee--C--C-C
Q 020233 170 ELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHG-----------LLTLLTQ--N--G-I 233 (329)
Q Consensus 170 ~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g-----------~lTlL~q--d--~-~ 233 (329)
.|.+.|...|+....++... ......-+++++|.+.. -..+|.|.. .+|+++. + . .
T Consensus 74 ~l~~~i~~~l~~~~~f~~~~--L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~ 145 (243)
T 3dkq_A 74 ALGQQIMDRLLAHPQFVSAA--LPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQ 145 (243)
T ss_dssp HHHHHHHHHHHTCHHHHHHH--CEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEE
T ss_pred HHHHHHHHHHccCcchhhcc--cccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCC
Confidence 33444445555554443322 11223358899998842 245666653 4566553 3 1 2
Q ss_pred Cc-eEEEeCCeEEEee-------eeccCcccccccccccCCCCceEEEEEeeC
Q 020233 234 CG-LQLLHNGKWVNVN-------ILSNGKYKSVVHRAVVNNKMTRVSLAIANG 278 (329)
Q Consensus 234 ~G-LqV~~~g~W~~V~-------~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~ 278 (329)
|| |.+.....=..|+ ++.. .++|+|.......|++++.+++
T Consensus 146 GGetvf~~~~~~~~V~P~~G~~v~F~s----~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 146 GGELVIQDTYGQQSIKLSAGSLVLYPS----SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ECCEEEEETTEEEEECCCTTCEEEEET----TSEEEECCEEEECEEEEEEEEE
T ss_pred CceEEEeeCCCcEEEecCCCEEEEECC----CCeEcCccccccCEEEEEEehh
Confidence 33 6555533224454 4443 3699997655578999999886
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=87.02 E-value=12 Score=32.46 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHH
Q 020233 59 KVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRF 96 (329)
Q Consensus 59 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 96 (329)
...+.|..++.+.|++++.| =++++.++.+.+.++.+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~-fLs~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDD-FLGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESS-SSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccCCEEEECC-CCCHHHHHHHHHHHHhh
Confidence 34467899999999877554 48999999999888764
No 9
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=60.33 E-value=16 Score=30.85 Aligned_cols=28 Identities=14% Similarity=0.006 Sum_probs=19.9
Q ss_pred cCcc-cccccccccCCCCceEEEEEeeCC
Q 020233 252 NGKY-KSVVHRAVVNNKMTRVSLAIANGP 279 (329)
Q Consensus 252 nG~~-kS~~HRV~~~~~~~R~Si~~F~~p 279 (329)
||.. ..++|+|.......|+++..+++-
T Consensus 189 ~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 189 DGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp TSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred CCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 3443 578999965445689999888754
No 10
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=51.87 E-value=22 Score=32.16 Aligned_cols=47 Identities=13% Similarity=0.079 Sum_probs=34.6
Q ss_pred CCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCC----hHHHHHHHHHHHHHhc
Q 020233 49 LTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVP----EKLMEMTMDACQRFFN 98 (329)
Q Consensus 49 l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~fF~ 98 (329)
|..++++ ++.+++.+.++.-||..=.+|||+ .+-+..+++++++|++
T Consensus 298 l~~g~~e---~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVD---KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHH---HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHH---HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4446653 344455666678898877899975 5889999999999985
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=49.44 E-value=34 Score=28.91 Aligned_cols=74 Identities=15% Similarity=0.011 Sum_probs=41.4
Q ss_pred eEEEEeeCCCCCCCcccccCCccCCC-----------ceeEEee--C-CCCceEEEeCCeEEEee-------eecc----
Q 020233 198 ILVANLYPPCPQPELAMGMPPHSDHG-----------LLTLLTQ--N-GICGLQLLHNGKWVNVN-------ILSN---- 252 (329)
Q Consensus 198 ~lrl~~Ypp~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLqV~~~g~W~~V~-------~~Tn---- 252 (329)
-+++++|.+... ..+|.|+. .+|+|+. | ..||=-+..+.. +.|. .|-|
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~-~~V~P~~G~al~f~~~~~~ 184 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLN-LSVHPRKGMAVYFEYFYQD 184 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTT-EEECCCTTCEEEEECCCSS
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCC-CEEecCCCeEEEEeccCCC
Confidence 478889987432 45666653 4777775 2 233322222111 2222 4443
Q ss_pred Ccc-cccccccccCCCCceEEEEEeeC
Q 020233 253 GKY-KSVVHRAVVNNKMTRVSLAIANG 278 (329)
Q Consensus 253 G~~-kS~~HRV~~~~~~~R~Si~~F~~ 278 (329)
|.. ..++|+|.......|+++..+++
T Consensus 185 g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 185 QSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp HHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred CCCCCccccccceeccccEEEEEeeEe
Confidence 221 46899997544568999988775
No 12
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=47.91 E-value=19 Score=20.42 Aligned_cols=18 Identities=28% Similarity=0.652 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHhccEEEE
Q 020233 59 KVIQDLGKACRDWGFFTV 76 (329)
Q Consensus 59 ~~~~~l~~A~~~~GFf~l 76 (329)
.+++.|.-.|.+-|||+-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 678889999999999983
No 13
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=47.71 E-value=1.2e+02 Score=25.27 Aligned_cols=24 Identities=17% Similarity=0.172 Sum_probs=18.0
Q ss_pred cccccccCC-CCceEEEEEeeCCCC
Q 020233 258 VVHRAVVNN-KMTRVSLAIANGPSL 281 (329)
Q Consensus 258 ~~HRV~~~~-~~~R~Si~~F~~p~~ 281 (329)
-.|+|..+. +.+|+||+|-+.+..
T Consensus 185 l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CEEeccCCCCCCCEEEEEEEeecCC
Confidence 579998754 468999999988765
No 14
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=45.73 E-value=11 Score=35.91 Aligned_cols=54 Identities=11% Similarity=0.232 Sum_probs=41.0
Q ss_pred CCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhc
Q 020233 38 EDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFN 98 (329)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 98 (329)
..-||.||++++.++. +.++..+.+++.|++.|.|. ||.+......+.+.+|.+
T Consensus 98 ~~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 4579999999764332 22456678899999988886 899888888888888763
No 15
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=45.69 E-value=9 Score=35.60 Aligned_cols=52 Identities=12% Similarity=0.089 Sum_probs=38.9
Q ss_pred CCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhcC
Q 020233 40 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNL 99 (329)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 99 (329)
++|.||++.+..+ .+...++.+++.++|+..+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~-----d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY-----DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC-----HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC-----HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 7999999876532 256788999999999999999988765 344556666443
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=45.34 E-value=12 Score=31.44 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=28.8
Q ss_pred CCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCC
Q 020233 40 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNV 81 (329)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 81 (329)
.||++++... ++. ++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP--GSP----ELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 6999988653 343 67788899998888899999996
No 17
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=43.22 E-value=26 Score=29.31 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=38.9
Q ss_pred ccCCccCCC--ceeEEeeCCCCceEEEeCCeEEEee----eeccCcc----cccccccccCCCCceEEEEE-eeCCCCC
Q 020233 215 GMPPHSDHG--LLTLLTQNGICGLQLLHNGKWVNVN----ILSNGKY----KSVVHRAVVNNKMTRVSLAI-ANGPSLD 282 (329)
Q Consensus 215 g~~~HtD~g--~lTlL~qd~~~GLqV~~~g~W~~V~----~~TnG~~----kS~~HRV~~~~~~~R~Si~~-F~~p~~d 282 (329)
.+.+|+|.. .+++++ ||+|-.+|-++.|. .|..|+. -|-.|.|.+.+...|+-+.+ |.+|+..
T Consensus 114 ~I~pH~g~~n~~lR~HL-----~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 114 HVWPHTGPTNCRLRMHL-----GLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELT 187 (197)
T ss_dssp EEEEECCSCTTEEEEEE-----EEECCSSSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTSC
T ss_pred CcCCeeCCCCCeEEEEE-----EEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCCC
Confidence 467888875 555555 23332223444444 5555543 37789999988889987765 5566553
No 18
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=38.81 E-value=16 Score=30.75 Aligned_cols=36 Identities=14% Similarity=0.282 Sum_probs=28.5
Q ss_pred CCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCC
Q 020233 40 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNV 81 (329)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 81 (329)
.||++++... ++. ++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 6899987653 333 67788899998888899999996
No 19
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=37.81 E-value=87 Score=26.28 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=41.5
Q ss_pred eEEEEeeCCCCCCCcccccCCccCC-----C--ceeEEeeCCCCceEEEe---CCeEEEee-------eeccCccccccc
Q 020233 198 ILVANLYPPCPQPELAMGMPPHSDH-----G--LLTLLTQNGICGLQLLH---NGKWVNVN-------ILSNGKYKSVVH 260 (329)
Q Consensus 198 ~lrl~~Ypp~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqV~~---~g~W~~V~-------~~TnG~~kS~~H 260 (329)
.+-+|+|.+. . ++++|.|- + ++||-+-. ..=+.+.. .+..+.+. +|+++- +--.|
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~~H 177 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLFYH 177 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTCCE
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchH-HceEe
Confidence 4568999873 2 78899982 2 23333321 12233322 24556665 665554 34789
Q ss_pred ccccCCC-------CceEEEEEee
Q 020233 261 RAVVNNK-------MTRVSLAIAN 277 (329)
Q Consensus 261 RV~~~~~-------~~R~Si~~F~ 277 (329)
.|..... ..|+|+.|=.
T Consensus 178 ~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 178 GIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp EECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ccCcccCCcCCCCCCCEEEEEeee
Confidence 9965432 3599999864
No 20
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=36.55 E-value=1.3e+02 Score=25.58 Aligned_cols=74 Identities=20% Similarity=0.215 Sum_probs=41.8
Q ss_pred eEEEEeeCCCCCCCcccccCCccCC--------CceeEEeeCCCCceEEEe-C----------CeEEEee-------eec
Q 020233 198 ILVANLYPPCPQPELAMGMPPHSDH--------GLLTLLTQNGICGLQLLH-N----------GKWVNVN-------ILS 251 (329)
Q Consensus 198 ~lrl~~Ypp~~~~~~~~g~~~HtD~--------g~lTlL~qd~~~GLqV~~-~----------g~W~~V~-------~~T 251 (329)
.+-+|+|++.. -++++|.|- .+.||-+-.. .=+.+.. . +..+.+. +|+
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 45689998742 267888884 2333333211 1122322 1 3566666 555
Q ss_pred cCcccccccccccC--CCCceEEEEEee
Q 020233 252 NGKYKSVVHRAVVN--NKMTRVSLAIAN 277 (329)
Q Consensus 252 nG~~kS~~HRV~~~--~~~~R~Si~~F~ 277 (329)
+.--..=.|.|... ....|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCSSCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcCCCCCCEEEEEeee
Confidence 55444446888643 256899999855
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=35.26 E-value=22 Score=29.64 Aligned_cols=51 Identities=10% Similarity=0.154 Sum_probs=35.0
Q ss_pred CCcEE-ecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCC--Ch------HHHHHHHHHHHHH
Q 020233 40 SIPVI-DFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNV--PE------KLMEMTMDACQRF 96 (329)
Q Consensus 40 ~iPvI-Dls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi--~~------~~~~~~~~~~~~f 96 (329)
.||++ ++... +++ ++++.+.+++.+.-.+.|.|||+ -- +.+++++..+..+
T Consensus 117 ~ip~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATE----EAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCS--SSH----HHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC--CcH----HHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 69999 66543 333 67778888888888899999995 12 4556666555443
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=34.64 E-value=26 Score=29.98 Aligned_cols=51 Identities=16% Similarity=0.068 Sum_probs=34.9
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCC--hHHHHHHHHHHHH
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVP--EKLMEMTMDACQR 95 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~--~~~~~~~~~~~~~ 95 (329)
..||++++... ++. ++++.+.+++++.-.+.+.|||+= -+.+++++..+..
T Consensus 160 ~~v~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 212 (238)
T 1pvt_A 160 QGISVVEFEKP--GSV----ELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEI 212 (238)
T ss_dssp SCCEEECCCST--TCH----HHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHH
T ss_pred CCceEecCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 36999988643 343 677888889988888999999962 1334455544444
No 23
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=34.54 E-value=1e+02 Score=25.51 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=41.1
Q ss_pred eEEEEeeCCCCCCCcccccCCccCCC--------ceeEEeeCCCCceEEEeC----------CeEEEee-------eecc
Q 020233 198 ILVANLYPPCPQPELAMGMPPHSDHG--------LLTLLTQNGICGLQLLHN----------GKWVNVN-------ILSN 252 (329)
Q Consensus 198 ~lrl~~Ypp~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~~----------g~W~~V~-------~~Tn 252 (329)
.+-+|+|.+.. -++++|.|-. +.+|-+.. ..=+.+... +..+.+. +|++
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 35689998843 2578888862 22333321 112333221 1344554 6766
Q ss_pred CcccccccccccCC--CCceEEEEEe
Q 020233 253 GKYKSVVHRAVVNN--KMTRVSLAIA 276 (329)
Q Consensus 253 G~~kS~~HRV~~~~--~~~R~Si~~F 276 (329)
+--..-.|.|-... ...|+|+.|=
T Consensus 175 ~~q~~w~H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWYHSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEEEEECCCTTCCSCEEEEEEE
T ss_pred hhhheeEeeccccCCCCCCEEEEEee
Confidence 65555679986532 3689999883
No 24
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=31.71 E-value=39 Score=29.39 Aligned_cols=49 Identities=16% Similarity=0.142 Sum_probs=35.4
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHH
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRF 96 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 96 (329)
++|+-|||+... ++ +..++|.+++.++|+..+.+-.++.+. ..+.++.|
T Consensus 16 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~ 64 (283)
T 1otj_A 16 AQISGADLTRPL--SD----NQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRF 64 (283)
T ss_dssp EEEESCCSSSCC--CH----HHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTT
T ss_pred EEEECCCcCccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 357778888744 33 356889999999999999998887653 34455555
No 25
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=31.09 E-value=35 Score=21.85 Aligned_cols=29 Identities=14% Similarity=0.466 Sum_probs=15.8
Q ss_pred cEEecCCCCCCChhHHHHHHHHHHHHHHh
Q 020233 42 PVIDFSLLTSSSPDQRSKVIQDLGKACRD 70 (329)
Q Consensus 42 PvIDls~l~~~~~~~~~~~~~~l~~A~~~ 70 (329)
|.|.+.-+...+++.++++++.|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44555433333555666666666666654
No 26
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.02 E-value=37 Score=21.65 Aligned_cols=29 Identities=14% Similarity=0.495 Sum_probs=16.3
Q ss_pred cEEecCCCCCCChhHHHHHHHHHHHHHHh
Q 020233 42 PVIDFSLLTSSSPDQRSKVIQDLGKACRD 70 (329)
Q Consensus 42 PvIDls~l~~~~~~~~~~~~~~l~~A~~~ 70 (329)
|.|.+.-+...+++.+++++++|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555433333555666666666666654
No 27
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=29.39 E-value=25 Score=30.90 Aligned_cols=50 Identities=8% Similarity=0.095 Sum_probs=34.1
Q ss_pred CCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCC--hHHHHHHHHHHHH
Q 020233 40 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVP--EKLMEMTMDACQR 95 (329)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~--~~~~~~~~~~~~~ 95 (329)
.||++++... ++. ++++.+.+++++.-.+.+.|||+= -+.+++++..+..
T Consensus 179 ~v~v~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~ 230 (274)
T 2v9l_A 179 GVGILPWMVP--GTD----AIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDT 230 (274)
T ss_dssp CEEECCCCCS--SSH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred ceeEecCCCC--CCH----HHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 5888887543 344 677888999999889999999962 2334444444443
No 28
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=29.00 E-value=58 Score=21.09 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=17.2
Q ss_pred cEEecCCCCCCChhHHHHHHHHHHHHHHh
Q 020233 42 PVIDFSLLTSSSPDQRSKVIQDLGKACRD 70 (329)
Q Consensus 42 PvIDls~l~~~~~~~~~~~~~~l~~A~~~ 70 (329)
|+|.+.- ...+.+.++++++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 5555554 344566677777777776654
No 29
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=27.81 E-value=49 Score=20.98 Aligned_cols=24 Identities=8% Similarity=0.264 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhHcCCChhh
Q 020233 162 KRIRQVARELLKGISESLGLEFCY 185 (329)
Q Consensus 162 ~~~~~l~~~ll~~la~~Lgl~~~~ 185 (329)
..-.+|+..|.+++++.||.+++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345778999999999999999753
No 30
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.44 E-value=28 Score=24.06 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=32.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhhHHhh
Q 020233 151 VGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERA 189 (329)
Q Consensus 151 ~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 189 (329)
.+-+..++.|+..-.+-...-+..||..+||+.+...-.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVW 52 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEW 52 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHH
Confidence 456788999999888888888999999999998754443
No 31
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=26.06 E-value=30 Score=28.86 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=32.4
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhcc---EEEEEcCCCC--hHHHHHHHHHHHH
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWG---FFTVINHNVP--EKLMEMTMDACQR 95 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~G---Ff~l~nhGi~--~~~~~~~~~~~~~ 95 (329)
..||+++.. .+ ..++++.+.+++.+.+ .+.|.|||+= -+.+++++..+..
T Consensus 138 ~~vp~~~~~---~g----~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~ 192 (208)
T 2irp_A 138 IKIPIFPNE---QN----IPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEA 192 (208)
T ss_dssp CEEEEECCC---SC----HHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHH
T ss_pred cceeeecCC---CC----HHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHH
Confidence 368888763 12 3467888889998765 7889999962 1334455544443
No 32
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=25.54 E-value=49 Score=21.62 Aligned_cols=29 Identities=28% Similarity=0.476 Sum_probs=17.2
Q ss_pred cEEecCCCCCCChhHHHHHHHHHHHHHHh
Q 020233 42 PVIDFSLLTSSSPDQRSKVIQDLGKACRD 70 (329)
Q Consensus 42 PvIDls~l~~~~~~~~~~~~~~l~~A~~~ 70 (329)
|+|.+.-+...+++.++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433334566677777777777665
No 33
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=25.34 E-value=1.1e+02 Score=27.86 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=34.3
Q ss_pred CChhHHHHHHHHHHHHHH-hccEEEEEcCCCC----hHHHHHHHHHHHHH
Q 020233 52 SSPDQRSKVIQDLGKACR-DWGFFTVINHNVP----EKLMEMTMDACQRF 96 (329)
Q Consensus 52 ~~~~~~~~~~~~l~~A~~-~~GFf~l~nhGi~----~~~~~~~~~~~~~f 96 (329)
+++++-.+.++++.+++. .-||+.=.+|||+ .+.+..++++++++
T Consensus 309 gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 309 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp SCHHHHHHHHHHHHHHHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 566666677777777776 3689999999985 47788888888875
No 34
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=25.27 E-value=50 Score=21.23 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhHcCCChhh
Q 020233 163 RIRQVARELLKGISESLGLEFCY 185 (329)
Q Consensus 163 ~~~~l~~~ll~~la~~Lgl~~~~ 185 (329)
.-.+|+..|.+++++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34678899999999999999754
No 35
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=24.84 E-value=59 Score=28.53 Aligned_cols=51 Identities=6% Similarity=-0.004 Sum_probs=36.3
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCC-CChHHHHHHHHHHHHHhc
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHN-VPEKLMEMTMDACQRFFN 98 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhG-i~~~~~~~~~~~~~~fF~ 98 (329)
++|+-|||+... ++ +..++|.+++.++|++.+.+-. ++. +...+.++.|=.
T Consensus 26 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDL--DA----ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 356777888743 33 3567899999999999999887 875 355556666643
No 36
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=24.67 E-value=63 Score=17.67 Aligned_cols=13 Identities=23% Similarity=0.447 Sum_probs=10.0
Q ss_pred ceEEEeCCeEEEe
Q 020233 235 GLQLLHNGKWVNV 247 (329)
Q Consensus 235 GLqV~~~g~W~~V 247 (329)
-..|+++|.|+..
T Consensus 11 ~~Yvr~dg~WV~l 23 (27)
T 2ww6_A 11 QAYVRKFGEWVLL 23 (27)
T ss_dssp CEEEEETTEEEEG
T ss_pred ceeEEEcCeEEEc
Confidence 3567889999974
No 37
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=23.74 E-value=58 Score=28.42 Aligned_cols=52 Identities=21% Similarity=0.229 Sum_probs=33.1
Q ss_pred CCcEEecCC-------CCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCC--hHHHHHHHHHHHH
Q 020233 40 SIPVIDFSL-------LTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVP--EKLMEMTMDACQR 95 (329)
Q Consensus 40 ~iPvIDls~-------l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~--~~~~~~~~~~~~~ 95 (329)
.||++++.. ...+++ ++++.|.+++.+.-.+.|.|||+= -+.+++++..+..
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~----ela~~ia~~l~~~~avLL~nHG~~~~G~tl~eA~~~~~~ 217 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSP----DVCADIAESLGSQTVVLMARHGVVNVGKSVREVVFRAFY 217 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSH----HHHHHHHHHHTTSSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCceecccccCCcccccccCCH----HHHHHHHHHhccCCEEEEcCCceEEEeCCHHHHHHHHHH
Confidence 689988641 122343 677888888888888999999962 1234444444433
No 38
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=23.40 E-value=62 Score=28.23 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=36.5
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHh
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFF 97 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF 97 (329)
++|.=|||+... ++ +..++|.+|+.++|.+.+.|-.++.+ +..+.++.|=
T Consensus 14 aei~gvdl~~~l--~~----~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 14 AQISGVDISRDI--SA----EERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp EEEESCCTTSCC--CH----HHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred EEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 357778888743 33 45678999999999999999888765 4445566653
No 39
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=23.31 E-value=1.2e+02 Score=27.39 Aligned_cols=45 Identities=9% Similarity=0.226 Sum_probs=33.1
Q ss_pred CChhHHHHHHHHHHHHHHhccEEEEEcCCCC----hHHHHHHHHHHHHH
Q 020233 52 SSPDQRSKVIQDLGKACRDWGFFTVINHNVP----EKLMEMTMDACQRF 96 (329)
Q Consensus 52 ~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~f 96 (329)
+++++-.+.++++.+.+..-||+.=.+|||+ .+.+..+.++++++
T Consensus 312 gt~e~i~~~v~~~l~~~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~~ 360 (367)
T 1r3s_A 312 ASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH 360 (367)
T ss_dssp SCHHHHHHHHHHHHHHHCSSSEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCeeecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5665656666666666555689888999975 47888888888876
No 40
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=22.98 E-value=71 Score=21.67 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=20.9
Q ss_pred cEEecCCCCCC-ChhHHHHHHHHHHHHHHhc
Q 020233 42 PVIDFSLLTSS-SPDQRSKVIQDLGKACRDW 71 (329)
Q Consensus 42 PvIDls~l~~~-~~~~~~~~~~~l~~A~~~~ 71 (329)
|+|.+.-+... +++.+++++++|.+++.+.
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~ 31 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRH 31 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56666544444 6778888888888888763
No 41
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=22.48 E-value=68 Score=21.08 Aligned_cols=28 Identities=18% Similarity=0.457 Sum_probs=15.7
Q ss_pred cEEecCCCC---CCChhHHHHHHHHHHHHHH
Q 020233 42 PVIDFSLLT---SSSPDQRSKVIQDLGKACR 69 (329)
Q Consensus 42 PvIDls~l~---~~~~~~~~~~~~~l~~A~~ 69 (329)
|.|.+.-+. ..+++.++++++.|.+++.
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~ 31 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMV 31 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 455554443 3455566666666666655
No 42
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=22.35 E-value=1.9e+02 Score=23.33 Aligned_cols=41 Identities=2% Similarity=0.109 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHHHhccEEEEEcC-CCChHHHHHHHHHHHH
Q 020233 55 DQRSKVIQDLGKACRDWGFFTVINH-NVPEKLMEMTMDACQR 95 (329)
Q Consensus 55 ~~~~~~~~~l~~A~~~~GFf~l~nh-Gi~~~~~~~~~~~~~~ 95 (329)
+.+...+++|.+.++++..++|+++ |++...+.++....++
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 4567788999999999998888875 8988777777766654
No 43
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=21.15 E-value=2e+02 Score=23.09 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhcc-EEEEEc-CCCChHHHHHHHHHHH
Q 020233 56 QRSKVIQDLGKACRDWG-FFTVIN-HNVPEKLMEMTMDACQ 94 (329)
Q Consensus 56 ~~~~~~~~l~~A~~~~G-Ff~l~n-hGi~~~~~~~~~~~~~ 94 (329)
.+...+++|.+.++++. .++|++ +|++.+.+.++....+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 56678888889998888 666655 4888877777666555
No 44
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=20.60 E-value=61 Score=28.47 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=17.2
Q ss_pred CCcccccCCccCCCceeEEee
Q 020233 210 PELAMGMPPHSDHGLLTLLTQ 230 (329)
Q Consensus 210 ~~~~~g~~~HtD~g~lTlL~q 230 (329)
+...++..+|.++.++|++++
T Consensus 48 ~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 48 ERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEEEE
Confidence 334677889999999999995
No 45
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=20.48 E-value=56 Score=28.65 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=34.1
Q ss_pred CCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCCCC--hHHHHHHHHHHHH
Q 020233 39 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVP--EKLMEMTMDACQR 95 (329)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~--~~~~~~~~~~~~~ 95 (329)
..||++|+..+. .+. ++++.|.+++.+.-.+.|.|||+= -+.+++++..+..
T Consensus 155 g~v~~~~y~~~~-~~~----el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~~ 208 (273)
T 3ocr_A 155 GRVAYHGYEGIA-LDL----SERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLHA 208 (273)
T ss_dssp TTEEEECCCCSS-CCH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCEEEECCCCCC-CCH----HHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHHH
Confidence 368888887542 233 566778888889999999999952 2334444444433
No 46
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=20.34 E-value=67 Score=21.48 Aligned_cols=29 Identities=17% Similarity=0.373 Sum_probs=17.2
Q ss_pred cEEecCCCCCCChhHHHHHHHHHHHHHHh
Q 020233 42 PVIDFSLLTSSSPDQRSKVIQDLGKACRD 70 (329)
Q Consensus 42 PvIDls~l~~~~~~~~~~~~~~l~~A~~~ 70 (329)
|+|.+.-+...+.+.++++++.|.+++.+
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~ 30 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAA 30 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 56665544334555666676666666654
No 47
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=20.33 E-value=20 Score=26.03 Aligned_cols=16 Identities=44% Similarity=0.563 Sum_probs=14.1
Q ss_pred eeccCccccccccccc
Q 020233 249 ILSNGKYKSVVHRAVV 264 (329)
Q Consensus 249 ~~TnG~~kS~~HRV~~ 264 (329)
.-|||+|||++.-|+.
T Consensus 51 ktsngrykstlklvvp 66 (131)
T 2vf9_A 51 KTSNGRYKSTLKLVVP 66 (131)
T ss_dssp ECTTSEEEEEEEEEEE
T ss_pred ecCCCceeeeEEEEEE
Confidence 7899999999998864
No 48
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=20.11 E-value=1.1e+02 Score=27.01 Aligned_cols=72 Identities=17% Similarity=0.093 Sum_probs=43.6
Q ss_pred eeEEEEeeCCCCCCCcccccCCccCC--------CceeEEee-CCCCceEEEeCCeEEEee---eeccCccccccccccc
Q 020233 197 QILVANLYPPCPQPELAMGMPPHSDH--------GLLTLLTQ-NGICGLQLLHNGKWVNVN---ILSNGKYKSVVHRAVV 264 (329)
Q Consensus 197 ~~lrl~~Ypp~~~~~~~~g~~~HtD~--------g~lTlL~q-d~~~GLqV~~~g~W~~V~---~~TnG~~kS~~HRV~~ 264 (329)
...|+ .-+|. -.+.+|.|+ +.+-+... ...+|..+.-+|+-+.-+ .|-=+ -+..|.|.+
T Consensus 92 ~~vRl-rL~PG------~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d--~~~~H~v~N 162 (290)
T 1e5r_A 92 QMARS-RNLKN------AIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLD--AATVHSAVN 162 (290)
T ss_dssp EEEEE-EEEES------EEEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECC--TTSCEEEEE
T ss_pred heEEE-EeCCC------CEeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEc--CCCeeEEEc
Confidence 34566 55552 247788888 23334332 124666666666554444 22222 356899999
Q ss_pred CCCCceEEEEEee
Q 020233 265 NNKMTRVSLAIAN 277 (329)
Q Consensus 265 ~~~~~R~Si~~F~ 277 (329)
.+..+|+.+.+=+
T Consensus 163 ~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 163 FSEISRQSLCVDF 175 (290)
T ss_dssp SSSSCCCEEEEEE
T ss_pred CCCCCeEEEEEEe
Confidence 9889999998766
Done!