BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020234
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/329 (92%), Positives = 316/329 (96%)
Query: 1 MGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT 60
MGGCK PITTFIVEPFVPH+QEYYLSIVS+RLG TISFSECGGIEIEENWDKVKTIFLPT
Sbjct: 95 MGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLPT 154
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDM 120
EK MT DACAPLIATLPLE RGKIGDFI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDM
Sbjct: 155 EKPMTPDACAPLIATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDM 214
Query: 121 RGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWT 180
RGELDDTAAFKNFKKW NIEFPLPFGRVLSSTE FIH LDEKTSASLKFTVLNPKGRIWT
Sbjct: 215 RGELDDTAAFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWT 274
Query: 181 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRA 240
MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRA
Sbjct: 275 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRA 334
Query: 241 LLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEE 300
LLIGGGIANFTDV TF+GIIRALREKESKLKAARMHI+VRRGGPNYQTGLAKMR LG E
Sbjct: 335 LLIGGGIANFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAE 394
Query: 301 LGIPLEVYGPEATMTGICKQAIDCIMSAS 329
LG+P+EVYGPEATMTGICKQAI+C+M+A+
Sbjct: 395 LGVPIEVYGPEATMTGICKQAIECVMAAA 423
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 298/326 (91%), Positives = 313/326 (96%)
Query: 1 MGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT 60
M GCK PITTFIVEPFVPH+QEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLP
Sbjct: 95 MEGCKAPITTFIVEPFVPHDQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPA 154
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDM 120
EK MTL+ CAPLIATLPLE R KIG+FIMG FAVFQDLDFSF+EMNPFTLV+GEP+PLDM
Sbjct: 155 EKSMTLEVCAPLIATLPLEVRAKIGNFIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDM 214
Query: 121 RGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWT 180
RGELDDTAAFKNF KW +IEFPLPFGRVLSSTE+FIH LDEKTSASLKFTVLNPKGRIWT
Sbjct: 215 RGELDDTAAFKNFNKWGDIEFPLPFGRVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWT 274
Query: 181 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRA 240
MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT DPDGRKRA
Sbjct: 275 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRA 334
Query: 241 LLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEE 300
LLIGGGIANFTDVA TFNGIIRALREKE++LKA+RMHI+VRRGGPNYQTGLA+MRALGEE
Sbjct: 335 LLIGGGIANFTDVAATFNGIIRALREKETRLKASRMHIYVRRGGPNYQTGLARMRALGEE 394
Query: 301 LGIPLEVYGPEATMTGICKQAIDCIM 326
LG+PLEVYGPEATMTGICK+AIDCIM
Sbjct: 395 LGVPLEVYGPEATMTGICKRAIDCIM 420
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 630 bits (1624), Expect = e-180, Method: Compositional matrix adjust.
Identities = 297/329 (90%), Positives = 315/329 (95%)
Query: 1 MGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT 60
MGGCK PITTFIVEPFVPH+QEYYLSIVS+RLG TISFSECGGIEIEENWDKVKT+FLPT
Sbjct: 95 MGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTVFLPT 154
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDM 120
EK MT DACAPLIATLPLE R KIGDFI GV++VFQDLDFSF+EMNPFT+VNGEPYPLDM
Sbjct: 155 EKAMTPDACAPLIATLPLEVRTKIGDFIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDM 214
Query: 121 RGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWT 180
RGELDDTAAFKNFKKW NI+FPLPFGRVLS +ESFIH LDEKTS+SLKFTVLNPKGRIWT
Sbjct: 215 RGELDDTAAFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWT 274
Query: 181 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRA 240
MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRA
Sbjct: 275 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRA 334
Query: 241 LLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEE 300
LLIGGGIANFTDVA TF+GIIRALREKESKLKAARM+I+VRRGGPNYQTGLAKMR LG E
Sbjct: 335 LLIGGGIANFTDVAATFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAE 394
Query: 301 LGIPLEVYGPEATMTGICKQAIDCIMSAS 329
LG+P+EVYGPEATMTGICKQAIDCIM+ +
Sbjct: 395 LGVPIEVYGPEATMTGICKQAIDCIMAEA 423
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 590 bits (1520), Expect = e-168, Method: Compositional matrix adjust.
Identities = 275/329 (83%), Positives = 306/329 (93%)
Query: 1 MGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT 60
M GCKGPITTFIVEPFVPHN+EYYL++VSDRLGC+ISFSECGGIEIEENWDKVKTIFLPT
Sbjct: 95 MSGCKGPITTFIVEPFVPHNEEYYLNVVSDRLGCSISFSECGGIEIEENWDKVKTIFLPT 154
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDM 120
+T + CAPL+ATLPLE + +I +FI +F +FQDLDF+F+EMNPFTLV+G PYPLDM
Sbjct: 155 GASLTPEICAPLVATLPLEIKAEIEEFIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDM 214
Query: 121 RGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWT 180
RGELDDTAAFKNFKKW +IEFPLPFGRV+S TESFIH LDEKTSASLKFTVLNPKGRIWT
Sbjct: 215 RGELDDTAAFKNFKKWGDIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWT 274
Query: 181 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRA 240
MVAGGGASVIYADTVGDLGYASELGNYAEYSGAP E+EVLQYARVVIDCATA+PDG+ RA
Sbjct: 275 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRA 334
Query: 241 LLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEE 300
L+IGGGIANFTDVA TFNGIIRAL+EKE+KLKAARMHIFVRRGGPNYQ GLAKMRALG++
Sbjct: 335 LVIGGGIANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDD 394
Query: 301 LGIPLEVYGPEATMTGICKQAIDCIMSAS 329
+G+P+EVYGPEATMTGICK+AI I +A+
Sbjct: 395 IGVPIEVYGPEATMTGICKEAIQYITAAA 423
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/329 (82%), Positives = 308/329 (93%)
Query: 1 MGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT 60
M GCKGPITTFIVEPFVPHN+E+YL+IVSDRLGC+ISFSECGGI+IEENWDKVKTI +PT
Sbjct: 95 MSGCKGPITTFIVEPFVPHNEEFYLNIVSDRLGCSISFSECGGIDIEENWDKVKTITIPT 154
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDM 120
+T + CAPL+ATLPLE +G++ DFI +F +F+DLDF+F+EMNPFTLV+G+PYPLDM
Sbjct: 155 GASLTFEICAPLVATLPLEIKGELEDFIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDM 214
Query: 121 RGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWT 180
RGELDDTAAFKNFKKW +IEFP+PFGRV+SSTESFIH LDEKTSASLKFTVLNPKGRIWT
Sbjct: 215 RGELDDTAAFKNFKKWGDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWT 274
Query: 181 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRA 240
MVAGGGASVIYADTVGDLGYASELGNYAEYSGAP E+EVLQYARVVIDCATA+PDG+ RA
Sbjct: 275 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRA 334
Query: 241 LLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEE 300
L+IGGGIANFTDVA TFNGIIRAL+EKE+KLKAARMHIFVRRGGPNYQ GLAKMR+LG+E
Sbjct: 335 LVIGGGIANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDE 394
Query: 301 LGIPLEVYGPEATMTGICKQAIDCIMSAS 329
+G+P+EVYGPEATMTGICK+AI I +A+
Sbjct: 395 IGVPIEVYGPEATMTGICKEAIQYITAAA 423
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/330 (85%), Positives = 295/330 (89%), Gaps = 18/330 (5%)
Query: 1 MGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT 60
MGGCK PITTFIVEPFVPH+QEYYLSIVS+RLG TISFSECGGIEIEENWDKVKTIFL T
Sbjct: 95 MGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLST 154
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDM 120
EK MT DACAPLIATLPLE RGKIGDFI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDM
Sbjct: 155 EKPMTPDACAPLIATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDM 214
Query: 121 RGELDDTAAFKNFK-KWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIW 179
RGELDDTAAFK + KW NIEFPLPFGRVLSSTE FIH LDEKTSASLKFTVLNPKGRIW
Sbjct: 215 RGELDDTAAFKTSRSKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIW 274
Query: 180 TMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKR 239
TMVAGG EL NYAEYSGAPNEEEVLQYARVV+DCATADPDGRKR
Sbjct: 275 TMVAGG-----------------ELENYAEYSGAPNEEEVLQYARVVLDCATADPDGRKR 317
Query: 240 ALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGE 299
ALLIGGGIANFTDV TF+GIIRALREKESKLKAARMHI+VRRGGPNYQTGLAKMR LG
Sbjct: 318 ALLIGGGIANFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGA 377
Query: 300 ELGIPLEVYGPEATMTGICKQAIDCIMSAS 329
ELG+P+EVYGPEATMTGICKQAI+C+M+A+
Sbjct: 378 ELGVPIEVYGPEATMTGICKQAIECVMAAA 407
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 206/325 (63%), Gaps = 3/325 (0%)
Query: 1 MGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFL 58
+G KG + F++EPFVPH+Q E+Y+ I + R G + F GG+++ + K + + +
Sbjct: 95 VGKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLV 154
Query: 59 PT-EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYP 117
EK T D L+ P + + + FI G+F ++DL F+++E+NP + Y
Sbjct: 155 GVDEKLNTEDIKRHLLVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVTKDGVYI 214
Query: 118 LDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGR 177
LD+ ++D TA + KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGR
Sbjct: 215 LDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGR 274
Query: 178 IWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGR 237
IWTMVAGGGASV+Y+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T +
Sbjct: 275 IWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPE 334
Query: 238 KRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRAL 297
+ L+IGG IANFT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M +
Sbjct: 335 GKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEV 394
Query: 298 GEELGIPLEVYGPEATMTGICKQAI 322
G+ GIP+ V+G E MT I A+
Sbjct: 395 GKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 283 bits (724), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 216/342 (63%), Gaps = 24/342 (7%)
Query: 1 MGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFL 58
+G +G + TFIVEPF H + E Y++I S+R I F E GG++I + +K +T+ +
Sbjct: 94 VGQTEGRLHTFIVEPFCAHTEKDEMYIAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSV 153
Query: 59 PTEKHMTLDACAPL---IATL--PLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNG 113
P + + +A P + TL PL+ + F++ ++ ++DL F+++E+NPF L+N
Sbjct: 154 PVQ--LNENAMTPSDEELTTLLGPLKDSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNN 211
Query: 114 EPYPLDMRGELDDTAAFKNFKKWA----------NIEFPLPFGRVLSSTESFIHSLDEKT 163
+ + LD+ LD+TA F KW ++EFP PFGR L+S E +I +D KT
Sbjct: 212 QIHVLDLAARLDETANFLCADKWKSRLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKT 271
Query: 164 SASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYA 223
ASLK T+LN KGR+WTMVAGGGASV++ DTV DLG ASEL NY EYSG P+E + +YA
Sbjct: 272 GASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYA 331
Query: 224 RVVIDC---ATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFV 280
+ ++ T PDG + L+IGG IANFT+VA TF GI+RA SKLK ++ IFV
Sbjct: 332 KTLLSVMTEGTPRPDG--KVLIIGGSIANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFV 389
Query: 281 RRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 322
RRGGPNYQ GL +++ +L +P+ V+GPE MT I A+
Sbjct: 390 RRGGPNYQEGLRRIKDAATKLELPIHVFGPETHMTAIVGAAL 431
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 281 bits (720), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 208/326 (63%), Gaps = 7/326 (2%)
Query: 1 MGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFL 58
+G KG + F++EPFVPH+Q E+Y+ I + R G + F GG+++ + K + + +
Sbjct: 95 VGKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDTKAQKLLV 154
Query: 59 PTEKHMTL-DACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYP 117
++ + D L+ P + + + FI G+F ++DL F+++E+NP + Y
Sbjct: 155 GVDEKLNAEDIKRHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYI 214
Query: 118 LDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGR 177
LD+ ++D TA + KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGR
Sbjct: 215 LDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGR 274
Query: 178 IWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PD 235
IWTMVAGGGASV+Y+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PD
Sbjct: 275 IWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPD 334
Query: 236 GRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMR 295
G + L+IGG IANFT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M
Sbjct: 335 G--KILIIGGSIANFTNVAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMG 392
Query: 296 ALGEELGIPLEVYGPEATMTGICKQA 321
+G+ GIP+ V+G E MT I A
Sbjct: 393 EVGKTTGIPIHVFGTETHMTAIVGMA 418
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 279 bits (714), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 207/327 (63%), Gaps = 7/327 (2%)
Query: 1 MGGCKGPITTFIVEPFVPHNQE--YYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFL 58
+G G + F++EPFVPH QE +Y+ I + R G + F GG+++ + K + + +
Sbjct: 95 VGKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLV 154
Query: 59 PTEKHMT-LDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYP 117
++ + D L+ P + + + FI G+F ++DL F+++E+NP + Y
Sbjct: 155 AVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYI 214
Query: 118 LDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGR 177
LD+ ++D TA + KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGR
Sbjct: 215 LDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGR 274
Query: 178 IWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PD 235
IWTMVAGGGASV+Y+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PD
Sbjct: 275 IWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPD 334
Query: 236 GRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMR 295
G + L+IGG IANFT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M
Sbjct: 335 G--KILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMG 392
Query: 296 ALGEELGIPLEVYGPEATMTGICKQAI 322
+G+ GIP+ V+G E MT I A+
Sbjct: 393 EVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 279 bits (713), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 208/327 (63%), Gaps = 7/327 (2%)
Query: 1 MGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFL 58
+G G + F++EPFVPH+Q E+Y+ I + R G + F GG+++ + K + + +
Sbjct: 95 VGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLV 154
Query: 59 PTEKHMT-LDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYP 117
++ + D L+ P + + + FI G+F ++DL F+++E+NP + Y
Sbjct: 155 GVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYV 214
Query: 118 LDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGR 177
LD+ ++D TA + KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGR
Sbjct: 215 LDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGR 274
Query: 178 IWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PD 235
IWTMVAGGGASV+Y+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PD
Sbjct: 275 IWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPD 334
Query: 236 GRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMR 295
G + L+IGG IANFT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M
Sbjct: 335 G--KILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMG 392
Query: 296 ALGEELGIPLEVYGPEATMTGICKQAI 322
+G+ GIP+ V+G E MT I A+
Sbjct: 393 EVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 207/327 (63%), Gaps = 7/327 (2%)
Query: 1 MGGCKGPITTFIVEPFVPHNQE--YYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFL 58
+G G + F++EPFVPH QE +Y+ I + R G + F GG+++ + K + + +
Sbjct: 95 VGKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLV 154
Query: 59 PTEKHMT-LDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYP 117
++ + D L+ P + + + FI G+F ++DL F+++E+NP + Y
Sbjct: 155 GVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYV 214
Query: 118 LDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGR 177
LD+ ++D TA + KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGR
Sbjct: 215 LDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGR 274
Query: 178 IWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PD 235
IWTMVAGGGASV+Y+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PD
Sbjct: 275 IWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPD 334
Query: 236 GRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMR 295
G + L+IGG IANFT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M
Sbjct: 335 G--KILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMG 392
Query: 296 ALGEELGIPLEVYGPEATMTGICKQAI 322
+G+ GIP+ V+G E MT I A+
Sbjct: 393 EVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 205/349 (58%), Gaps = 36/349 (10%)
Query: 6 GPITTFIVEPFVPH--NQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLP---T 60
G +TTF+VEPFVPH N EYY++I S R G I F GG+++ + K + + +P +
Sbjct: 128 GYLTTFLVEPFVPHPPNTEYYININSVREGDWILFCNEGGVDVGDVDAKARKLLVPVRLS 187
Query: 61 EKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV----NGEPY 116
E + L++ +P+E + DFI+ +++V+ D F+++E+NP ++ + +
Sbjct: 188 EFPSRATIASTLLSDIPVEQHESLVDFIIRLYSVYVDCQFTYLEINPLVVIPTAKGADVF 247
Query: 117 PLDMRGELDDTAAFKNFKKWA--------------------------NIEFPLPFGRVLS 150
LD+ +LD TA F+ KWA + FP PFGR LS
Sbjct: 248 YLDLAAKLDQTAEFECGAKWAVARAPESLGIKTSGEESGAINADHGPPMVFPAPFGRELS 307
Query: 151 STESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 210
E+++ LD KT ASLK T+LN +GR+W +VAGGGASV+YAD V G A EL NY EY
Sbjct: 308 KEEAYVQGLDAKTGASLKLTILNAEGRVWNLVAGGGASVVYADAVAVNGAADELANYGEY 367
Query: 211 SGAPNEEEVLQYARVVIDCAT-ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKES 269
SGAP + + +YA+ V+D T +P + L IGGGIANFT A TF I RAL + +
Sbjct: 368 SGAPTDGQTYEYAKTVLDLMTRGEPRADGKVLFIGGGIANFTSPAVTFRAIARALGDYKD 427
Query: 270 KLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGIC 318
KL A ++ I+VRR GPNYQ GL +R G++ +PL+VYGPE ++GI
Sbjct: 428 KLHAHKVSIWVRRAGPNYQEGLRVIREAGKKFDLPLKVYGPECHISGIV 476
>sp|Q57663|SUCC_METJA Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=sucC PE=3
SV=1
Length = 364
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 136/325 (41%), Gaps = 71/325 (21%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLGCT--ISFSECGGIEIEENWDK-----------VK 54
+ +VE +P +EYY+SI+ DR I FS GG++IEE +K V+
Sbjct: 83 VEKILVEEKLPIEKEYYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVR 142
Query: 55 TIFLPTEKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NG 113
FLP + A LP GK+ D I ++ +F++LD + +E+NP + +G
Sbjct: 143 KPFLPYIARWIVKE-----AKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDG 197
Query: 114 EPYPLDMRGELDDTAAFKN----FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
Y D LDD AAF++ F+++ N E LPF V LD
Sbjct: 198 NVYAADAVLHLDDDAAFRHNYEEFEEYKNKE-KLPFAYV---------ELD--------- 238
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
G + + G G ++ D + +LG + + G + E V R V++
Sbjct: 239 ------GDVAVIGNGAGLTLASMDIINNLGRKP--ACFLDIGGGADAETVKLALRKVLEN 290
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNY 287
+ + I GGI +VA GI+ L+E + A RM G N
Sbjct: 291 KNV------KGIFINILGGITRCDEVAK---GIVEVLKEHPNVKFAVRMM------GTNE 335
Query: 288 QTGLAKMRALGEELGIPLEVYGPEA 312
+ G R + EE GIP E EA
Sbjct: 336 EIG----RKILEEHGIPYETSMEEA 356
>sp|O67546|SUCC_AQUAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus
(strain VF5) GN=sucC PE=3 SV=1
Length = 385
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGC--TISFSECGGIEIEENWDKVKTIFLPTEKHM 64
P+ ++E ++EYYL+I DR I S GG+EIEE I + +
Sbjct: 91 PVNRVLIEKATNIDKEYYLAITLDRSKSKPVIMASAAGGMEIEE-------IVKENPEAI 143
Query: 65 TLDACAPLIATLPLEFR----------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLVN-G 113
++ P + +P + R + + ++ ++ DLD S +E+NP L G
Sbjct: 144 IIETIDPELGLMPYQARELAFKLNLPVKEFASIALKLYQIYSDLDASLVEINPLVLTKEG 203
Query: 114 EPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLD-EKTSASLKFTVL 172
LD + ++DD A F++ K +E E+ + L+ E L + L
Sbjct: 204 NLIALDAKLDIDDNALFRH-KDLEEME-----------DETQLPQLEVEAKKYGLNYIKL 251
Query: 173 NPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATA 232
N G I MV G G ++ D + G E N+ + G N E++ R+++ A
Sbjct: 252 N--GNIGCMVNGAGLAMATMDIIKLAG--GEPANFLDVGGGANVEQIANAFRILM----A 303
Query: 233 DPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
DPD + + I GGI +A G+I A SK+ R+ I R G N + G
Sbjct: 304 DPDVKAVFINIFGGILRVDRLA---QGLIEA-----SKMVELRVPIVARLEGTNVEEG 353
>sp|B4U901|SUCC_HYDS0 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum
sp. (strain Y04AAS1) GN=sucC PE=3 SV=1
Length = 382
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 59/316 (18%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEK--H 63
++ ++E P +E+YLSI DR I S+ GG+EIEE L EK
Sbjct: 92 VSRLLIEKATPIEKEFYLSITLDRSNSKILIMASKEGGMEIEE---------LSKEKPDA 142
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-N 112
+ + P++ +P + R G + ++ + DLD S +E+NP L +
Sbjct: 143 IIKEYVDPVLGIMPYQTRKLSFALGLNPSLFGKIVSKLYQAYMDLDASLLEINPLVLTKD 202
Query: 113 GEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 170
G+ LD + E+DD AAF K+ ++ +I P E +
Sbjct: 203 GDIVLLDAKVEIDDNAAFRHKDIEELEDITQIDPL---------------EVEAKKYGLN 247
Query: 171 VLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCA 230
+ +G I MV G G ++ D + G A N+ + G + E++ R++
Sbjct: 248 YIKLEGNIGCMVNGAGLAMTTMDIIKLAGGAP--ANFLDVGGGASVEQIANAFRIL---- 301
Query: 231 TADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
T+D + + + I GGI +A NG+I A +K+ ++ + VR G N + G
Sbjct: 302 TSDENVKAVFINIFGGILRCDRLA---NGLIEA-----AKIVNIKIPVVVRLEGTNVEEG 353
Query: 291 LAKMRALGEELGIPLE 306
R L +E G+ E
Sbjct: 354 ----RKLLKESGLNFE 365
>sp|A8ZRW7|SUCC_DESOH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=sucC PE=3 SV=1
Length = 388
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 44/296 (14%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDR--LGCTISFSECGGIEIEE----NWDKVKTIFLPTE 61
+ +VE V +E YLS+V+DR G I SE GG++IE +K+ +F+
Sbjct: 93 VQKVLVEQGVSIAKELYLSVVADRETAGIVIMASEAGGMDIEAVAETTPEKILKVFVNPL 152
Query: 62 KHMTLDAC--APLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEP-YPL 118
++ C A LP E + G+F +F D D S +E+NP L + L
Sbjct: 153 AGLSAFHCRQAAYGLNLPAEAIKPFTQVVSGLFKLFVDYDASLVEINPLILTTDKAVMAL 212
Query: 119 DMRGELDDTAAFKNFKKWA----NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNP 174
D + DD+A F++ A + E PL E ++ +N
Sbjct: 213 DAKINFDDSALFRHKDILALRDTDEEDPL-----------------EVEASRFNLNYINM 255
Query: 175 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADP 234
G + MV G G ++ D + G +E N+ + G N E V R+++ +DP
Sbjct: 256 DGNVGNMVNGAGLAMATMDIIKLAG--AEPANFLDVGGGANAEMVENGFRIIL----SDP 309
Query: 235 DGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
+ + I GGI +A+ GI++A R A + + VR G N G
Sbjct: 310 KVKCILVNIFGGILRCDVLAS---GIVQAARN-----TAIHVPLVVRMEGTNVDEG 357
>sp|A9KBQ4|SUCC_COXBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=sucC PE=3 SV=1
Length = 390
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 37/298 (12%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKV--KTIFLPTEK 62
P+ +VE +E YL V DR I F S GG+EIE+ +K K + + +
Sbjct: 92 PVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDP 151
Query: 63 HMTLD--ACAPLIATLPLEFRGKI---GDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 116
+ L C L L L+ ++ D +MG++ +F + D S +E+NP + +GE
Sbjct: 152 AIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELI 211
Query: 117 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 176
LD + +DD+A ++ + + +T+ H E + + + G
Sbjct: 212 CLDAKINIDDSALYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDG 258
Query: 177 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 236
I MV G G ++ D + G + N+ + G+ +E V + R+++ +D +
Sbjct: 259 NIGCMVNGAGLAMATMDLIKLSG--GDPANFLDVGGSATKERVTEAFRIIV----SDKNV 312
Query: 237 RKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 294
+ + I GGI +A +GII A++E + + VR G N Q G K+
Sbjct: 313 KGILVNIFGGIVRCDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A3DLR9|SUCC_STAMF Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=sucC PE=3
SV=1
Length = 379
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMT 65
+ +VE + ++EYYLS+ DR I + S GG+EIEE K L
Sbjct: 85 VELILVEEKICIDKEYYLSLTIDRSNREIVYLVSPLGGVEIEELVKKYPDKLLRIRVDPV 144
Query: 66 LDACAPLIATLPLEFRG-------KIGDFIMGVFAVFQDLDFSFIEMNPFT-LVNGEPYP 117
+ P ++ L +F G + + ++ + ++ D +E NP + E
Sbjct: 145 I-GYKPYMSRLAAKFLGLPKELWPSMHKIMNSMYNIMKNYDADLVEFNPLVKTCSNEIVA 203
Query: 118 LDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGR 177
+D + +DD + ++ +IEF +GR LS E+ + L F+ + G
Sbjct: 204 VDAKITIDDNSLYR------HIEFAEKYGRELSEMEAI--------AKKLGFSYVELDGD 249
Query: 178 IWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGR 237
I M G G ++ D V Y N+ + G + E V + A++++ +
Sbjct: 250 IGIMCNGAGLTMATMDMVA--YYGGRPANFLDIGGGASRERVREAAKLLL------KHDK 301
Query: 238 KRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMR 295
+ LL+ GGI +VA GII A+ E + I +R G N + G R
Sbjct: 302 VKVLLVNIFGGITRCNEVA---RGIIEAVEE-----TGVKKPIVIRLLGTNEEIG----R 349
Query: 296 ALGEELG 302
L EE G
Sbjct: 350 RLLEEKG 356
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 141/334 (42%), Gaps = 51/334 (15%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLG--CTISFSECGGIEIEENWDKV-KTIFLPTEKHM 64
I +E +EYY+ V DR T+ SE GG EIEE K + IF T +
Sbjct: 93 IKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV 152
Query: 65 TLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPY 116
AP A +P E K F++ ++ VF + D S +E+NP T GE
Sbjct: 153 V--GLAPYQARRIAFNINIPKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEGEVL 210
Query: 117 PLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNP 174
LD + DD A F K+ ++ ++E P E + L + L+
Sbjct: 211 ALDAKVNFDDNALFKHKDIQELRDLEEEDP-------------KEIEASKYDLSYIALD- 256
Query: 175 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADP 234
G I MV G G ++ DT+ G N+ + G +E+V + ++++ D
Sbjct: 257 -GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKIIL----GDE 309
Query: 235 DGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 294
+ + + I GGI +A GI+ A++E E L + VR G N + G
Sbjct: 310 NVKGIFVNIFGGIMKCDIIA---EGIVAAVKEVELTLP-----LVVRLEGTNVERG---- 357
Query: 295 RALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 328
+ + +E G+ +E P ATM ++ + + A
Sbjct: 358 KEILKESGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|P53592|SUCC_COXBU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sucC PE=3 SV=2
Length = 390
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 51/305 (16%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE +E YL V DR I F S GG+EIE+ +K L +
Sbjct: 92 PVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KV 147
Query: 65 TLDACAPLIATLPLEFRG--------------KIGDFIMGVFAVFQDLDFSFIEMNPFTL 110
T+D P I P + R D +MG++ +F + D S +E+NP +
Sbjct: 148 TID---PAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVI 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
+GE LD + +DD+A ++ + + +T+ H E + +
Sbjct: 205 TGSGELICLDAKINIDDSALYRQSE----------LREMRDTTQEDEH---ETMAQQWEL 251
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
+ G I MV G G ++ D + G + N+ + G+ +E V + ++++
Sbjct: 252 NYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV-- 307
Query: 230 ATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQT 289
+D + + + I GGI +A +GII A++E + + VR G N Q
Sbjct: 308 --SDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQL 357
Query: 290 GLAKM 294
G K+
Sbjct: 358 GAKKL 362
>sp|A9N8R8|SUCC_COXBR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1
Length = 390
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 51/305 (16%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE +E YL V DR I F S GG+EIE+ +K L +
Sbjct: 92 PVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KV 147
Query: 65 TLDACAPLIATLPLEFRG--------------KIGDFIMGVFAVFQDLDFSFIEMNPFTL 110
T+D P I P + R D +MG++ +F + D S +E+NP +
Sbjct: 148 TID---PAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVI 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
+GE LD + +DD+A ++ + + +T+ H E + +
Sbjct: 205 TGSGELICLDAKINIDDSALYRQSE----------LREMRDTTQEDEH---ETMAQQWEL 251
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
+ G I MV G G ++ D + G + N+ + G+ +E V + ++++
Sbjct: 252 NYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV-- 307
Query: 230 ATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQT 289
+D + + + I GGI +A +GII A++E + + VR G N Q
Sbjct: 308 --SDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQL 357
Query: 290 GLAKM 294
G K+
Sbjct: 358 GAKKL 362
>sp|B6IZ97|SUCC_COXB2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuG_Q212) GN=sucC PE=3 SV=1
Length = 390
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 37/298 (12%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKV--KTIFLPTEK 62
P+ +VE +E YL V DR I F S GG+EIE+ +K K + + +
Sbjct: 92 PVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDP 151
Query: 63 HMTLD--ACAPLIATLPLEFRGKI---GDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 116
+ L C L L L+ ++ D +MG++ +F + D S +E+NP + +GE
Sbjct: 152 AIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELI 211
Query: 117 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 176
LD + +DD+A ++ + + +T+ H E + + + G
Sbjct: 212 CLDAKINIDDSALYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDG 258
Query: 177 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 236
I MV G G ++ D + G + N+ + G+ +E V + ++++ +D +
Sbjct: 259 NIGCMVNGAGLAMATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNV 312
Query: 237 RKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 294
+ + I GGI +A +GII A++E + + VR G N Q G K+
Sbjct: 313 KGILVNIFGGIVRCDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A0LIY8|SUCC_SYNFM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=sucC PE=3 SV=1
Length = 388
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEE----NWDKVKTIFLPTE 61
+ +VE +P +E YLS++ DR I F SE GG++IEE +K+ +F+
Sbjct: 93 VKKLLVEEGLPIEKELYLSVLPDRGTSKIVFMASEAGGMDIEEVAAKTPEKIIKVFIDPL 152
Query: 62 KHMTLDACAPLIATLPL--EFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPL 118
L L L E + + ++ + D D S +E+NP L + L
Sbjct: 153 LGFKGFHANELAYGLNLKPELIKQFNAMVAALYKLCTDYDCSLVEINPLVLTSDNRVIAL 212
Query: 119 DMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 176
D + DD A + K+ +++ +++ PF E + L + + P G
Sbjct: 213 DGKINFDDNAMYRHKDIQEYRDLDEEDPFEI-------------EASKFELNYIKM-PGG 258
Query: 177 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 236
I MV G G ++ D + G A N+ + G + E+V R+++ ADP
Sbjct: 259 NIGNMVNGAGLAMATMDIIQQAGAAP--ANFLDVGGGASAEQVENGFRIIL----ADPAV 312
Query: 237 RKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
+ + I GGI +A NG++ A +K R+ + +R G N + G
Sbjct: 313 KGVLINIFGGILRCDRLA---NGVVEA-----AKKVGIRVPVVIRMEGTNVEQG 358
>sp|B6J8N7|SUCC_COXB1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuK_Q154) GN=sucC PE=3 SV=1
Length = 390
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 37/298 (12%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKV--KTIFLPTEK 62
P+ +VE +E YL V DR I F S GG+EIE+ +K K + + +
Sbjct: 92 PVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDP 151
Query: 63 HMTLD--ACAPLIATLPLEFRGKI---GDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 116
+ L C L L L+ ++ D +MG++ +F + D S +E+NP + +GE
Sbjct: 152 AIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELI 211
Query: 117 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 176
LD + +DD+A ++ + + +T+ H E + + + G
Sbjct: 212 CLDAKINIDDSALYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDG 258
Query: 177 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 236
I MV G G ++ D + G + N+ + G+ +E V + +++ +D +
Sbjct: 259 NIGCMVNGAGLAMATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKII----ASDKNV 312
Query: 237 RKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 294
+ + I GGI +A +GII A++E + + VR G N Q G K+
Sbjct: 313 KGILVNIFGGIVRCDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A4IZC2|SUCC_FRATW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain WY96-3418) GN=sucC
PE=3 SV=1
Length = 387
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + + E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L KG I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--KGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|B2V8I4|SUCC_SULSY Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=sucC
PE=3 SV=1
Length = 389
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 44/310 (14%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCT--ISFSECGGIEIEE----NWDKV--KTI-- 56
P++ +E ++E+Y++I DR I S GG+EIEE N + + +TI
Sbjct: 92 PVSRLYIEEATAIDKEFYVAITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITQTIEP 151
Query: 57 FLPTEKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEP 115
F+ + + L LP K ++ ++ +LD S +E+NP L +G
Sbjct: 152 FIGLRSYHARELALKL--GLPKNLLNKAASIFTTLYKIYIELDASMVEINPLVLTKDGNI 209
Query: 116 YPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPK 175
LD + E DD F++ + ++ P + + F +L + L+
Sbjct: 210 VILDAKIEFDDNGLFRH-PEIMEMDDPTQISPLEVEAKKF----------NLNYIKLD-- 256
Query: 176 GRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPD 235
G I MV G G ++ DT+ G E N+ + G+ N ++ ++++ +DP+
Sbjct: 257 GNIACMVNGAGLAMSTMDTIKLAG--GEPANFLDVGGSANATQIANAFKIIL----SDPN 310
Query: 236 GRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMR 295
+ + I GGI +A GII A +E + + + VR G N + G +
Sbjct: 311 VKAIFINIFGGILRCDRLA---EGIITAAKE-----VSINVPVIVRMEGTNVELG----K 358
Query: 296 ALGEELGIPL 305
+ +E G+PL
Sbjct: 359 KMLQESGLPL 368
>sp|B0TZ23|SUCC_FRAP2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
philomiragia subsp. philomiragia (strain ATCC 25017)
GN=sucC PE=3 SV=1
Length = 387
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + + E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E L +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNY 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q0BKS4|SUCC_FRATO Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain OSU18) GN=sucC PE=3
SV=1
Length = 387
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + I E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q2A253|SUCC_FRATH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain LVS) GN=sucC PE=3
SV=1
Length = 387
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + I E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|A7NDR1|SUCC_FRATF Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain FTNF002-00 / FTA)
GN=sucC PE=3 SV=1
Length = 387
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + I E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q3SKM1|SUCC_THIDA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=sucC PE=3 SV=1
Length = 386
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 50/300 (16%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHM 64
P+ T +VE +P +E YLS++ DR ++ S GG++IE+ + T + +
Sbjct: 92 PVHTVLVEETLPIARELYLSLLVDRASERVAVVASAAGGMDIEQ-------VAHATPEKV 144
Query: 65 TLDACAPLIATLPLEFR------GKIGD-------FIMGVFAVFQDLDFSFIEMNPFTL- 110
+ C PL+ + R G GD + ++ VF D S +E+NP +
Sbjct: 145 LTEICDPLLGVQDFQCRALAFALGLGGDAYKDFCRLLPQLYRVFVANDLSLLEINPLVVT 204
Query: 111 VNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 170
+ PLD + +DD A ++ K A++ +S I + E + +
Sbjct: 205 TDNRVLPLDCKMSVDDNALYRR-KALADLR-----------DDSQIDA-KEAAANAANVN 251
Query: 171 VLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCA 230
+ G I MV G G ++ D + G A N+ + G E V Q ++++
Sbjct: 252 YVALAGNIGCMVNGAGLAMATMDLIQLEGGAP--ANFLDVGGGATPETVAQGFKIIL--- 306
Query: 231 TADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
DP+ + + I GGI +A GII+A+RE + + VR G N + G
Sbjct: 307 -LDPNVKAVLINIFGGIVRCDVIA---EGIIQAVRE-----VGVEVPVIVRLEGTNAELG 357
>sp|Q5NHF3|SUCC_FRATT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=sucC PE=3 SV=1
Length = 387
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + + E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAILINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q14IV5|SUCC_FRAT1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain FSC 198) GN=sucC
PE=3 SV=1
Length = 387
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + + E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAILINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|B2SDM1|SUCC_FRATM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. mediasiatica (strain FSC147) GN=sucC
PE=3 SV=1
Length = 387
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + + E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|C1F2F2|SUCC_ACIC5 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=sucC PE=3 SV=1
Length = 391
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDK-----VKTIFLPT 60
+ ++E ++E YL IV DR + F S+ GG+EIEE K K P
Sbjct: 96 VQRLLIEETAAIDRELYLGIVLDRAAAKLVFMASQAGGMEIEEVAAKDPSAIFKAYIDPA 155
Query: 61 EKHMTLDA--CAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYP 117
A A + P + + F+MG++ + D D S +E+NPF T + + +
Sbjct: 156 VGFQAYQARQLAFALGLKPTQINDAV-KFMMGLYKAYMDTDASLLEINPFITTKDDKLFA 214
Query: 118 LDMRGELDDTAAF--KNFKKWANI--EFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLN 173
LD + DD A F K+ K+ +I E PL E + +L + L+
Sbjct: 215 LDCKINFDDNAMFRHKDLKELRDIAEEDPLEV---------------EASKYALNYIKLD 259
Query: 174 PKGRIWTMVAGGGASVIYADTVGDLGYASEL-GNYAEYSGAPNEEEVLQYARVVIDCATA 232
G I MV G G ++ D + YA + N+ + G N++++ +++ +
Sbjct: 260 --GNIACMVNGAGLAMATMDII---QYAGGMPANFLDVGGGANQQQIEHAFEILL----S 310
Query: 233 DPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
D + + + I GGI V T +G++ A ++ K+ I +R G N + G
Sbjct: 311 DKNVQAVFINIFGGILR---VDTLAHGVVGAAQKLNVKVP-----IVLRLEGTNVEEG 360
>sp|A0Q5H4|SUCC_FRATN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. novicida (strain U112) GN=sucC PE=3
SV=1
Length = 387
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 50/279 (17%)
Query: 7 PITTF-IVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKH 63
P+ + + E P +E YL V DR ++F S GG++IEE L E
Sbjct: 92 PVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-- 149
Query: 64 MTLDACAPLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL 110
PL+ P + R +I DF+ +G + F + DF+ E+NP +
Sbjct: 150 -----VDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAV 204
Query: 111 V-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKF 169
NGE +D + LD A +++ K A + + L ++E H L+ +
Sbjct: 205 RENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------Y 253
Query: 170 TVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC 229
L +G I MV G G ++ D + Y + N+ + G +E V++ ++++D
Sbjct: 254 VAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD- 308
Query: 230 ATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALRE 266
D +A+LI GGI +A II A++E
Sbjct: 309 -----DENVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q1H031|SUCC_METFK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=sucC
PE=3 SV=1
Length = 387
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 129/305 (42%), Gaps = 60/305 (19%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE +P +E Y+S++ DR + S GG+EIEE I + + +
Sbjct: 92 PVEKVLVEATLPIARELYVSMLVDRSLERVVLVASAAGGMEIEE-------IAKDSPEKI 144
Query: 65 TLDACAPLIATLPLEFR------GKIGDFIM-------GVFAVFQDLDFSFIEMNPFTL- 110
+ C PL + + R G +GD + G++ +F++ D + +E+NP +
Sbjct: 145 LQEVCDPLNGLVDYQARNIAFALGLVGDQVAAFTRLAKGLYRLFKENDLALLEINPLIVT 204
Query: 111 VNGEPYPLDMRGELDDTAAFKNF-----KKWANIEFPLPFGRVLSSTESFIHSLDEKTSA 165
G LD + +DD A ++ + W+ + + E+ H +A
Sbjct: 205 AEGALVALDCKMSVDDNALYRRRELAEQRDWSQDD----------AKEAEAH------NA 248
Query: 166 SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARV 225
L + LN G I MV G G ++ D + G A N+ + G V + ++
Sbjct: 249 GLNYIALN--GNIGCMVNGAGLAMATMDLIKLHGGAP--ANFLDVGGGATATTVARAFKI 304
Query: 226 VIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGP 285
++ ADP+ + + I GGI +A GII A++E + + VR G
Sbjct: 305 IL----ADPNVKAILVNIFGGIMRCDIIA---EGIITAVKE-----VGIEIPVVVRLEGT 352
Query: 286 NYQTG 290
N + G
Sbjct: 353 NVELG 357
>sp|Q5X7K6|SUCC_LEGPA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Paris) GN=sucC PE=3 SV=1
Length = 387
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 60/305 (19%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE ++E YL V DR I S GG+EIE+ + T + +
Sbjct: 92 PVNAILVEETCEIDKELYLGAVVDRATRRVVIMASTEGGVEIEK-------VAHETPEKI 144
Query: 65 TLDACAPLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV 111
PL+ +P + R K+G +MG+ +F D D S +E+NP +
Sbjct: 145 FKVVVDPLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVIT 204
Query: 112 -NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---L 167
+G+ LD + +D A F+ K L + D + AS L
Sbjct: 205 KSGQLICLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWEL 250
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ L+ G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 251 NYIPLD--GTIGCMVNGAGLAMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV 306
Query: 228 DCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGP 285
D + + +L+ GGI +A +GI+ A++E + K+ + VR G
Sbjct: 307 ------SDEKVKGILVNIFGGIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGN 352
Query: 286 NYQTG 290
N Q G
Sbjct: 353 NAQLG 357
>sp|O84828|SUCC_CHLTR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=sucC PE=3 SV=1
Length = 386
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 2 GGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG-C-TISFSECGGIEIEENWDKVKTIFLP 59
G PI ++ P V EYYL+IV DR C I S+ GG++IEE +K L
Sbjct: 87 AGLSLPINKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLL- 145
Query: 60 TEKHMTLDACAPL-------IATLPLEFRGKIGD----FIMGVFAVFQDLDFSFIEMNPF 108
MTL + + IA +E+ I D I + F + D S +E+NP
Sbjct: 146 ---KMTLPSSGKIYGYQLRRIAKF-MEWDQPIADQGNRIIRQLLQCFYEKDASLLEINPL 201
Query: 109 TLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASL 167
L +G LD + +DD A +++ + A+ P S E+ L ++ L
Sbjct: 202 VLTKDGSLVILDAKMTIDDNALYRH-PQLADCYDP--------SQENIRDVLAKQ----L 248
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ + G I +V G G ++ D + Y N+ + G+ +E+++ + +V+
Sbjct: 249 GLSYIALDGTIGCLVNGAGLAMSTLDILK--LYGGSAANFLDVGGSASEKQIQEAISLVL 306
Query: 228 DCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR-EKES 269
+D R + I GGI D A +G++ A++ +KE+
Sbjct: 307 ----SDKSVRVLFIHIFGGI---MDCAVVASGLVSAMQGQKET 342
>sp|Q3KKL8|SUCC_CHLTA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia
trachomatis serovar A (strain HAR-13 / ATCC VR-571B)
GN=sucC PE=3 SV=1
Length = 386
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 2 GGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG-C-TISFSECGGIEIEENWDKVKTIFLP 59
G PI ++ P V EYYL+IV DR C I S+ GG++IEE +K L
Sbjct: 87 AGLSLPINKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLL- 145
Query: 60 TEKHMTLDACAPL-------IATLPLEFRGKIGD----FIMGVFAVFQDLDFSFIEMNPF 108
MTL + + IA +E+ I D I + F + D S +E+NP
Sbjct: 146 ---KMTLPSSGKIYGYQLRRIAKF-MEWDQPIADQGNRIIRQLLQCFYEKDASLLEINPL 201
Query: 109 TLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASL 167
L +G LD + +DD A +++ + A+ P S E+ L ++ L
Sbjct: 202 VLTKDGSLVILDAKMTIDDNALYRH-PQLADCYDP--------SQENIRDVLAKQ----L 248
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ + G I +V G G ++ D + Y N+ + G+ +E+++ + +V+
Sbjct: 249 GLSYIALDGTIGCLVNGAGLAMSTLDILK--LYGGSAANFLDVGGSASEKQIQEAISLVL 306
Query: 228 DCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR-EKES 269
+D R + I GGI D A +G++ A++ +KE+
Sbjct: 307 ----SDKSVRVLFIHIFGGI---MDCAVVASGLVSAMQGQKET 342
>sp|Q5WZ04|SUCC_LEGPL Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Lens) GN=sucC PE=3 SV=1
Length = 387
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 60/305 (19%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDR--LGCTISFSECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE ++E YL V DR I S GG+EIE+ + T + +
Sbjct: 92 PVNAILVEETCEIDKELYLGAVVDRSTRRVVIMASTEGGVEIEK-------VAHETPEKI 144
Query: 65 TLDACAPLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV 111
PL+ +P + R K+G +MG+ +F D D S +E+NP +
Sbjct: 145 FKVVVDPLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVIT 204
Query: 112 -NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---L 167
+G+ LD + +D A F+ K L + D + AS L
Sbjct: 205 KSGQLICLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWEL 250
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ L+ G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 251 NYIPLD--GTIGCMVNGAGLAMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV 306
Query: 228 DCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGP 285
D + + +L+ GGI +A +GI+ A++E + K+ + VR G
Sbjct: 307 ------SDEKVKGILVNIFGGIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGN 352
Query: 286 NYQTG 290
N Q G
Sbjct: 353 NAQLG 357
>sp|A5IH21|SUCC_LEGPC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Corby) GN=sucC PE=3 SV=1
Length = 387
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 60/305 (19%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDR--LGCTISFSECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE ++E YL V DR I S GG+EIE+ + T + +
Sbjct: 92 PVNAILVEETCEIDKELYLGAVVDRSTRRVVIMASTEGGVEIEK-------VAHETPEKI 144
Query: 65 TLDACAPLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV 111
PL+ +P + R K+G +MG+ +F D D S +E+NP +
Sbjct: 145 FKVVVDPLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVIT 204
Query: 112 -NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---L 167
+G+ LD + +D A F+ K L + D + AS L
Sbjct: 205 KSGQLICLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWEL 250
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ L+ G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 251 NYIPLD--GTIGCMVNGAGLAMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV 306
Query: 228 DCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGP 285
D + + +L+ GGI +A +GI+ A++E + K+ + VR G
Sbjct: 307 ------SDEKVKGILVNIFGGIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGN 352
Query: 286 NYQTG 290
N Q G
Sbjct: 353 NAQLG 357
>sp|Q65JP0|SUCC_BACLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3
SV=1
Length = 386
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 8 ITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDK-----VKTIFLPT 60
I ++E +EYY+ +V DR I SE GG EIEE +K VK + P
Sbjct: 93 IKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPA 152
Query: 61 EKHMTLDACAPLIA-TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPL 118
+ A A +P E G+ F+MG++ F + D S E+NP + +G+ L
Sbjct: 153 VGLQSYQARKIAFAINIPKELVGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMAL 212
Query: 119 DMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 176
D + D A + K+ ++ +++ P E ++ + ++ G
Sbjct: 213 DAKLNFDSNALYRQKDILEYRDLDEEDP---------------KEIEASKYDLSYISLDG 257
Query: 177 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
I MV G G ++ D + Y E N+ + G E+V + ++++
Sbjct: 258 NIGCMVNGAGLAMSTMDIIKH--YGGEPANFLDVGGGATAEKVTEAFKIIL 306
>sp|A5UIW0|SUCC_HAEIG Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain PittGG) GN=sucC PE=3 SV=1
Length = 394
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 49/278 (17%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHM 64
P+ E ++E+YLS V DR + F S GG++IEE + E
Sbjct: 92 PVNQIYFEETCDIDKEFYLSAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVE--- 148
Query: 65 TLDACAPLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV 111
PL LP + R K+G D MG+ +F + D S +E+NP L
Sbjct: 149 ----IDPLFGGLPYQGRELAFKLGLSDAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLT 204
Query: 112 -NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 170
G LD + +DD A F++ + LS+ + + D + + + KF
Sbjct: 205 QQGNLVCLDAKIAVDDNALFRH--------------KDLSALQDLTQN-DAREAEAEKFQ 249
Query: 171 V--LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVID 228
+ + +G I MV G G ++ D V Y + N+ + G +E V + ++++
Sbjct: 250 LNYVALEGDIGCMVNGAGLAMGTMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL- 306
Query: 229 CATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 266
DP + + I GGI +A G+I A+ E
Sbjct: 307 ---TDPSVKVILVNIFGGIVRCDLIA---EGVIAAVNE 338
>sp|Q9PL99|SUCC_CHLMU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=sucC PE=3 SV=1
Length = 386
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 40/300 (13%)
Query: 2 GGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG-C-TISFSECGGIEIEENWDKVKTIFLP 59
G P+ ++ P V EYY++IV DR C I S+ GGI+IEE +K + L
Sbjct: 87 AGLSLPVNKVLISPLVEIALEYYIAIVIDRKHRCPVIMLSKSGGIDIEEIAEKQPDLLLK 146
Query: 60 TEKHMTLDACAPLIATLP--LEFRGKIGD----FIMGVFAVFQDLDFSFIEMNPFTLV-N 112
+ A + + +E+ + D I + F D D S +E+NP L +
Sbjct: 147 IALPSSGKIYAYQLRHIAKFMEWDKLVADRGNHIIRKLLQCFYDNDASLLEINPLVLTKD 206
Query: 113 GEPYPLDMRGELDDTAAFKN--FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 170
G+ LD + +DD A +++ W + S E+ L ++ L +
Sbjct: 207 GDLIILDAKITIDDNALYRHPQLADWYD-----------PSQENIRDVLAKQ----LGLS 251
Query: 171 VLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCA 230
+ G I +V G G ++ D + Y N+ + G+ +E+++ + +V+
Sbjct: 252 YIALDGTIGCLVNGAGLAMSTLDILK--LYGGSAANFLDVGGSASEKQIQEAISLVL--- 306
Query: 231 TADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 290
+D + R + I GGI D A +G++ A++ ++ + +R G N G
Sbjct: 307 -SDKNVRVLFIHIFGGI---MDCAVVASGLVSAMQGQQGSIPT-----VIRLEGTNVDKG 357
>sp|A5UCR4|SUCC_HAEIE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain PittEE) GN=sucC PE=3 SV=1
Length = 389
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 49/278 (17%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHM 64
P+ E ++E+YLS V DR + F S GG++IEE + E
Sbjct: 92 PVNQIYFEETCDIDKEFYLSAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVE--- 148
Query: 65 TLDACAPLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV 111
PL LP + R K+G D MG+ +F + D S +E+NP L
Sbjct: 149 ----IDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLT 204
Query: 112 -NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 170
G LD + +DD A F++ + LS+ + + D + + + KF
Sbjct: 205 QQGNLVCLDAKIAVDDNALFRH--------------KDLSALQDLTQN-DAREAEAEKFQ 249
Query: 171 V--LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVID 228
+ + +G I MV G G ++ D V Y + N+ + G +E V + ++++
Sbjct: 250 LNYVALEGDIGCMVNGAGLAMGTMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL- 306
Query: 229 CATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 266
DP + + I GGI +A G+I A+ E
Sbjct: 307 ---TDPSVKVILVNIFGGIVRCDLIA---EGVIAAVNE 338
>sp|B0BAS9|SUCC_CHLTB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia
trachomatis serovar L2b (strain UCH-1/proctitis) GN=sucC
PE=3 SV=1
Length = 386
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 50/319 (15%)
Query: 2 GGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG-C-TISFSECGGIEIEENWDKVKTIFLP 59
G P+ ++ P V EYYL+IV DR C I S+ GG++IEE +K L
Sbjct: 87 AGLSLPVNKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLL- 145
Query: 60 TEKHMTLDACAPL-------IATLPLEFRGKIGD----FIMGVFAVFQDLDFSFIEMNPF 108
MTL + + IA +E+ I D I + F + D S +E+NP
Sbjct: 146 ---KMTLPSSGKIYGYQLRRIAKF-MEWDQPIADQGNRIIRQLLQCFYEKDASLLEINPL 201
Query: 109 TLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASL 167
L +G LD + +DD A +++ + A+ P S E+ L ++ L
Sbjct: 202 VLTKDGSLVILDAKMTIDDNALYRH-PELADCYDP--------SQENIRDVLAKQ----L 248
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ + G I +V G G ++ D + Y N+ + G+ +E+++ + +V+
Sbjct: 249 GLSYIALDGTIGCLVNGAGLAMSTLDILK--LYGGSAANFLDVGGSASEKQIQEAISLVL 306
Query: 228 DCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNY 287
+D R + I GGI D A +G++ A++ ++ + +R G N
Sbjct: 307 ----SDKSVRVLFIHIFGGI---MDCAVVASGLVSAMQGQKETIPT-----VIRLEGTNV 354
Query: 288 QTGLAKMRALGEELGIPLE 306
G + + GIP E
Sbjct: 355 DKG----KGMIINAGIPCE 369
>sp|B0B950|SUCC_CHLT2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia
trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)
GN=sucC PE=3 SV=1
Length = 386
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 50/319 (15%)
Query: 2 GGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG-C-TISFSECGGIEIEENWDKVKTIFLP 59
G P+ ++ P V EYYL+IV DR C I S+ GG++IEE +K L
Sbjct: 87 AGLSLPVNKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLL- 145
Query: 60 TEKHMTLDACAPL-------IATLPLEFRGKIGD----FIMGVFAVFQDLDFSFIEMNPF 108
MTL + + IA +E+ I D I + F + D S +E+NP
Sbjct: 146 ---KMTLPSSGKIYGYQLRRIAKF-MEWDQPIADQGNRIIRQLLQCFYEKDASLLEINPL 201
Query: 109 TLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASL 167
L +G LD + +DD A +++ + A+ P S E+ L ++ L
Sbjct: 202 VLTKDGSLVILDAKMTIDDNALYRH-PELADCYDP--------SQENIRDVLAKQ----L 248
Query: 168 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 227
+ + G I +V G G ++ D + Y N+ + G+ +E+++ + +V+
Sbjct: 249 GLSYIALDGTIGCLVNGAGLAMSTLDILK--LYGGSAANFLDVGGSASEKQIQEAISLVL 306
Query: 228 DCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNY 287
+D R + I GGI D A +G++ A++ ++ + +R G N
Sbjct: 307 ----SDKSVRVLFIHIFGGI---MDCAVVASGLVSAMQGQKETIPT-----VIRLEGTNV 354
Query: 288 QTGLAKMRALGEELGIPLE 306
G + + GIP E
Sbjct: 355 DKG----KGMIINAGIPCE 369
>sp|Q2SD35|SUCC_HAHCH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hahella
chejuensis (strain KCTC 2396) GN=sucC PE=3 SV=1
Length = 388
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 124/306 (40%), Gaps = 54/306 (17%)
Query: 7 PITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHM 64
P+ +VE +QE YL V DR I F S GG+EIE+ ++ L
Sbjct: 92 PVNKILVESCTDIDQELYLGAVMDRGTRRIVFMASTEGGVEIEKVAEETPEKILKA---- 147
Query: 65 TLDACAPLIATLPLEFR-------------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV 111
+D PL+ P + R + +G+ +FQDLD + +E+NP +
Sbjct: 148 VID---PLVGAQPYQARELAFALGLNSDQVKQFTKIFLGLAKLFQDLDLALLEVNPLVIT 204
Query: 112 N-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 170
G + LD + +D A ++ P R+ + E +A +
Sbjct: 205 KGGNLHCLDAKVVVDGNALYRQ---------P----RIRDMHDPSQEDPREAHAAKWELN 251
Query: 171 VLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCA 230
+ +G I MV G G ++ D V G A N+ + G +E V + ++++
Sbjct: 252 YVALEGNIGCMVNGAGLAMGTMDIVKLHGGAP--ANFLDVGGGATKERVTEAFKIIL--- 306
Query: 231 TADPDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQ 288
D +A+L+ GGI +A +GII A+ E ++ + VR G N +
Sbjct: 307 ---SDDNVKAVLVNIFGGIVRCDLIA---DGIIGAVEE-----VGVKIPVVVRLEGNNAE 355
Query: 289 TGLAKM 294
G K+
Sbjct: 356 LGAKKL 361
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,888,656
Number of Sequences: 539616
Number of extensions: 5540428
Number of successful extensions: 12792
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 326
Number of HSP's that attempted gapping in prelim test: 12622
Number of HSP's gapped (non-prelim): 367
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)