Query 020242
Match_columns 329
No_of_seqs 315 out of 1654
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 13:56:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 3.4E-39 1.1E-43 275.7 6.9 109 161-270 2-112 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 2.9E-37 9.8E-42 254.1 6.7 106 162-269 2-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 9.1E-37 3.1E-41 253.7 7.6 106 163-269 2-108 (116)
4 2cbp_A Cucumber basic protein; 100.0 2.3E-35 7.8E-40 237.6 6.7 96 163-265 1-96 (96)
5 1jer_A Cucumber stellacyanin; 100.0 1.6E-33 5.5E-38 240.6 7.0 90 8-97 21-112 (138)
6 1f56_A Plantacyanin; cupredoxi 100.0 8.6E-32 2.9E-36 214.7 8.2 91 163-265 1-91 (91)
7 2cbp_A Cucumber basic protein; 100.0 6.4E-32 2.2E-36 217.5 6.6 90 2-92 7-96 (96)
8 1ws8_A Mavicyanin; oxidized fo 100.0 6.2E-32 2.1E-36 222.3 6.5 93 4-96 13-107 (109)
9 1x9u_A Umecyanin; cupredoxin, 100.0 1.5E-31 5.2E-36 222.2 7.3 87 8-94 19-106 (116)
10 1f56_A Plantacyanin; cupredoxi 100.0 4E-30 1.4E-34 205.1 7.3 86 5-92 6-91 (91)
11 1qhq_A Protein (auracyanin); e 99.1 4.7E-11 1.6E-15 100.5 6.8 95 161-265 15-139 (140)
12 1bxv_A Plastocyanin; copper pr 99.1 2.2E-10 7.5E-15 88.6 6.6 86 163-265 3-91 (91)
13 2cal_A Rusticyanin; iron respi 98.9 5.5E-10 1.9E-14 96.3 5.1 77 188-265 61-154 (154)
14 1qhq_A Protein (auracyanin); e 98.9 6.9E-10 2.4E-14 93.3 3.8 79 14-92 32-139 (140)
15 2cal_A Rusticyanin; iron respi 98.9 1.1E-09 3.9E-14 94.3 5.3 76 16-92 62-154 (154)
16 1pmy_A Pseudoazurin; electron 98.8 1.1E-08 3.9E-13 85.0 9.4 73 188-267 21-95 (123)
17 1paz_A Pseudoazurin precursor; 98.8 1.3E-08 4.4E-13 84.6 8.7 72 188-266 21-94 (123)
18 1bxv_A Plastocyanin; copper pr 98.7 5.3E-09 1.8E-13 80.7 4.2 72 14-92 18-91 (91)
19 1iuz_A Plastocyanin; electron 98.7 1E-08 3.4E-13 81.0 5.8 91 163-265 2-98 (98)
20 2aan_A Auracyanin A; cupredoxi 98.7 4.1E-08 1.4E-12 82.3 9.4 94 161-265 17-139 (139)
21 2gim_A Plastocyanin; beta shee 98.7 3.3E-08 1.1E-12 78.6 8.4 91 163-265 4-105 (106)
22 1plc_A Plastocyanin; electron 98.7 3.1E-08 1.1E-12 78.0 7.6 75 188-265 17-99 (99)
23 3erx_A Pseudoazurin; copper pr 98.7 2.6E-08 8.9E-13 82.9 7.4 72 188-266 21-94 (123)
24 1b3i_A PETE protein, protein ( 98.7 6.1E-08 2.1E-12 75.9 9.0 90 163-265 3-97 (97)
25 3tu6_A Pseudoazurin (blue copp 98.7 5.1E-08 1.8E-12 81.6 8.8 74 188-268 23-98 (127)
26 3ef4_A Pseudoazurin, blue copp 98.7 5.5E-08 1.9E-12 81.1 8.4 72 188-266 22-95 (124)
27 1byp_A Protein (plastocyanin); 98.6 6.2E-08 2.1E-12 76.1 7.5 76 188-265 17-99 (99)
28 1kdj_A Plastocyanin; electron 98.6 5.1E-08 1.8E-12 77.0 6.8 90 164-265 2-102 (102)
29 1pmy_A Pseudoazurin; electron 98.6 1E-07 3.4E-12 79.2 7.6 74 14-94 20-95 (123)
30 2plt_A Plastocyanin; electron 98.6 4.2E-08 1.4E-12 76.9 4.9 91 163-265 2-98 (98)
31 3erx_A Pseudoazurin; copper pr 98.5 1.1E-07 3.9E-12 79.0 6.7 74 13-93 19-94 (123)
32 1paz_A Pseudoazurin precursor; 98.5 1.3E-07 4.4E-12 78.6 6.9 76 10-93 16-94 (123)
33 1pcs_A Plastocyanin; electron 98.5 2.9E-07 9.8E-12 72.1 7.5 91 163-265 3-98 (98)
34 3tu6_A Pseudoazurin (blue copp 98.5 1.7E-07 5.7E-12 78.4 6.5 78 10-94 18-97 (127)
35 2aan_A Auracyanin A; cupredoxi 98.5 4.4E-07 1.5E-11 76.0 8.2 78 14-92 34-139 (139)
36 3ef4_A Pseudoazurin, blue copp 98.4 2.2E-07 7.7E-12 77.4 6.0 73 14-93 21-95 (124)
37 1plc_A Plastocyanin; electron 98.4 4.1E-07 1.4E-11 71.5 5.9 80 11-92 13-99 (99)
38 1iuz_A Plastocyanin; electron 98.4 1.4E-07 4.7E-12 74.4 3.0 77 14-92 17-98 (98)
39 2gim_A Plastocyanin; beta shee 98.4 5.8E-07 2E-11 71.2 6.2 72 14-92 19-105 (106)
40 1b3i_A PETE protein, protein ( 98.3 1.1E-06 3.6E-11 68.7 7.3 76 14-92 18-97 (97)
41 1byp_A Protein (plastocyanin); 98.2 1.3E-06 4.6E-11 68.4 5.7 77 14-92 16-99 (99)
42 1kdj_A Plastocyanin; electron 98.2 1E-06 3.6E-11 69.4 4.9 77 14-92 16-102 (102)
43 2plt_A Plastocyanin; electron 98.1 1.2E-06 4.2E-11 68.3 2.7 77 14-92 17-98 (98)
44 1pcs_A Plastocyanin; electron 98.0 6.8E-06 2.3E-10 64.2 5.6 77 14-92 18-98 (98)
45 3cvb_A Plastocyanin; cupredoxi 98.0 1.5E-05 5E-10 62.7 7.2 88 164-265 4-104 (105)
46 3ay2_A Lipid modified azurin p 98.0 1.6E-05 5.3E-10 69.5 7.7 94 161-265 41-166 (167)
47 2ux6_A Pseudoazurin; type-1 co 97.9 1.9E-05 6.3E-10 65.3 7.2 70 188-266 21-92 (122)
48 4hci_A Cupredoxin 1; structura 97.9 4E-06 1.4E-10 66.2 2.7 67 188-265 28-100 (100)
49 1cuo_A Protein (azurin ISO-2); 97.9 4.8E-05 1.6E-09 63.5 8.5 91 164-265 4-128 (129)
50 4hci_A Cupredoxin 1; structura 97.8 5.4E-06 1.8E-10 65.4 1.1 68 14-92 27-100 (100)
51 2ov0_A Amicyanin; beta-sandwic 97.8 3.9E-05 1.3E-09 61.1 6.0 67 188-265 33-105 (105)
52 1id2_A Amicyanin; beta barrel, 97.7 7.7E-05 2.6E-09 59.6 6.8 67 188-265 34-106 (106)
53 2iaa_C Azurin; quinoprotein, t 97.6 0.00016 5.4E-09 60.3 8.1 77 188-265 17-127 (128)
54 2ccw_A Azurin II, AZN-2; elect 97.6 0.00014 4.9E-09 60.6 7.3 91 164-265 4-128 (129)
55 1nwp_A Azurin; electron transp 97.6 0.00015 5E-09 60.5 7.1 91 164-265 4-128 (128)
56 3ay2_A Lipid modified azurin p 97.5 6.5E-05 2.2E-09 65.6 4.1 76 16-92 59-166 (167)
57 2ux6_A Pseudoazurin; type-1 co 97.5 0.00018 6E-09 59.4 6.5 72 14-94 20-93 (122)
58 1cuo_A Protein (azurin ISO-2); 97.5 0.00043 1.5E-08 57.7 8.7 78 14-92 17-128 (129)
59 1iko_P Ephrin-B2; greek KEY, g 97.5 5.3E-05 1.8E-09 66.7 3.1 80 191-270 25-144 (178)
60 1id2_A Amicyanin; beta barrel, 97.4 0.00024 8.3E-09 56.6 6.4 67 15-92 34-106 (106)
61 3c75_A Amicyanin; copper prote 97.4 0.00024 8.1E-09 59.2 6.1 67 188-265 60-132 (132)
62 3cvb_A Plastocyanin; cupredoxi 97.3 0.00025 8.5E-09 55.5 5.1 75 14-92 18-104 (105)
63 2ov0_A Amicyanin; beta-sandwic 97.3 0.00043 1.5E-08 54.9 6.4 67 15-92 33-105 (105)
64 3c75_A Amicyanin; copper prote 97.2 0.00057 2E-08 56.8 6.4 67 15-92 60-132 (132)
65 1nwp_A Azurin; electron transp 97.1 0.00051 1.8E-08 57.2 4.8 77 15-92 18-128 (128)
66 2iaa_C Azurin; quinoprotein, t 97.1 0.0021 7E-08 53.5 8.5 75 17-92 19-127 (128)
67 2ccw_A Azurin II, AZN-2; elect 97.0 0.0015 5.2E-08 54.4 7.0 75 17-92 20-128 (129)
68 1iko_P Ephrin-B2; greek KEY, g 96.7 0.00097 3.3E-08 58.7 3.8 79 18-96 25-143 (178)
69 2dv6_A Nitrite reductase; elec 96.6 0.0078 2.7E-07 58.9 9.8 73 15-94 55-133 (447)
70 1iby_A Nitrosocyanin; RED copp 96.5 0.0017 5.9E-08 51.7 3.5 67 188-265 38-111 (112)
71 2vsm_B Ephrin-B2; developmenta 96.3 0.0031 1.1E-07 53.4 4.4 77 190-266 23-139 (140)
72 2cua_A Protein (CUA); CUA cent 96.1 0.016 5.6E-07 48.3 7.5 68 188-266 60-135 (135)
73 3d12_B Ephrin-B3; beta propell 95.9 0.0093 3.2E-07 50.5 5.4 76 190-265 22-140 (141)
74 1oe1_A Dissimilatory copper-co 95.9 0.092 3.2E-06 49.4 12.9 36 234-269 285-321 (336)
75 1shx_A Ephrin-A5; ephrin signa 95.8 0.012 3.9E-07 49.8 5.5 76 190-268 23-135 (138)
76 1iby_A Nitrosocyanin; RED copp 95.7 0.013 4.6E-07 46.4 5.4 66 16-92 39-111 (112)
77 3czu_B Ephrin-A1; ATP-binding, 95.7 0.011 3.7E-07 52.1 5.0 77 190-269 50-163 (182)
78 3gdc_A Multicopper oxidase; be 95.6 0.021 7.3E-07 53.0 7.0 78 188-266 195-288 (288)
79 2x11_B Ephrin-A5; receptor-sig 95.5 0.015 5.2E-07 50.9 5.1 77 190-269 52-165 (177)
80 3fsa_A Azurin; copper, cupredo 95.2 0.074 2.5E-06 44.1 8.2 74 188-265 18-125 (125)
81 1mzy_A Copper-containing nitri 94.7 0.19 6.6E-06 47.2 10.7 74 17-93 66-152 (333)
82 3fsa_A Azurin; copper, cupredo 94.2 0.3 1E-05 40.4 9.4 72 17-92 20-125 (125)
83 2cua_A Protein (CUA); CUA cent 94.0 0.068 2.3E-06 44.5 5.3 67 15-92 60-134 (135)
84 2wo3_B Ephrin-A2; transferase- 93.6 0.12 4E-06 44.5 6.0 76 190-268 32-145 (157)
85 2dv6_A Nitrite reductase; elec 93.4 0.049 1.7E-06 53.2 3.8 78 188-269 55-135 (447)
86 3kw8_A Laccase, putative coppe 93.3 0.32 1.1E-05 44.6 9.1 94 172-269 156-268 (276)
87 3d12_B Ephrin-B3; beta propell 92.9 0.083 2.8E-06 44.7 4.0 74 18-92 23-140 (141)
88 1shx_A Ephrin-A5; ephrin signa 92.8 0.098 3.3E-06 44.1 4.3 75 17-94 23-134 (138)
89 2x11_B Ephrin-A5; receptor-sig 92.4 0.11 3.7E-06 45.5 4.1 77 17-96 52-165 (177)
90 3czu_B Ephrin-A1; ATP-binding, 92.0 0.11 3.6E-06 45.8 3.6 76 17-95 50-162 (182)
91 2vsm_B Ephrin-B2; developmenta 91.9 0.24 8.2E-06 41.8 5.6 76 18-93 24-139 (140)
92 3s8f_B Cytochrome C oxidase su 91.8 0.51 1.7E-05 40.8 7.7 70 188-266 93-168 (168)
93 1fwx_A Nitrous oxide reductase 90.7 0.18 6.1E-06 51.9 4.4 69 188-267 513-593 (595)
94 3sbq_A Nitrous-oxide reductase 90.2 0.29 1E-05 50.3 5.4 68 188-266 558-637 (638)
95 3hei_B Ephrin-A1; EPH receptor 89.6 0.4 1.4E-05 40.1 4.8 76 190-265 22-131 (132)
96 1fwx_A Nitrous oxide reductase 89.5 0.17 6E-06 52.0 3.1 67 17-94 515-593 (595)
97 3tas_A Small laccase, multi-co 89.1 5.6 0.00019 36.9 13.0 32 240-271 245-276 (313)
98 2wo3_B Ephrin-A2; transferase- 88.9 0.55 1.9E-05 40.3 5.3 35 17-51 32-77 (157)
99 3cg8_A Laccase; oxidoreductase 88.9 0.81 2.8E-05 43.4 7.1 82 188-270 209-310 (343)
100 3sbq_A Nitrous-oxide reductase 86.2 0.43 1.5E-05 49.1 3.5 67 15-93 558-637 (638)
101 3t9w_A Small laccase, multi-co 85.2 14 0.00049 34.0 13.3 32 239-270 260-291 (299)
102 3s8f_B Cytochrome C oxidase su 82.8 1.8 6.1E-05 37.3 5.5 68 15-92 93-167 (168)
103 1mzy_A Copper-containing nitri 80.3 1.1 3.8E-05 41.9 3.5 78 188-268 64-154 (333)
104 1oe1_A Dissimilatory copper-co 79.8 1.2 3.9E-05 41.8 3.5 77 189-268 66-154 (336)
105 1kbv_A ANIA, major outer membr 74.8 1.4 4.9E-05 41.2 2.6 76 188-268 70-158 (327)
106 2zoo_A Probable nitrite reduct 70.1 1.7 5.7E-05 42.2 1.9 78 188-268 60-148 (442)
107 1kbv_A ANIA, major outer membr 67.7 3.2 0.00011 38.8 3.2 35 234-268 274-309 (327)
108 2bw4_A Copper-containing nitri 67.5 3.3 0.00011 38.7 3.3 77 189-268 72-160 (340)
109 3hei_B Ephrin-A1; EPH receptor 63.0 4.5 0.00015 33.6 2.9 35 17-51 22-67 (132)
110 2zoo_A Probable nitrite reduct 62.0 3.2 0.00011 40.2 2.0 35 235-269 265-300 (442)
111 3gdc_A Multicopper oxidase; be 60.6 6.1 0.00021 36.1 3.7 79 189-268 67-156 (288)
112 3iuw_A Activating signal coint 59.5 5.7 0.00019 30.4 2.7 18 16-33 35-53 (83)
113 2bw4_A Copper-containing nitri 58.6 5.3 0.00018 37.2 2.9 75 17-94 73-159 (340)
114 2zwn_A Two-domain type laccase 51.3 9.5 0.00033 35.7 3.4 77 188-267 35-127 (339)
115 3ghp_A Cellulosomal scaffoldin 51.3 7.9 0.00027 34.6 2.6 13 15-27 17-29 (227)
116 1zpu_A Iron transport multicop 47.6 16 0.00055 36.5 4.5 78 188-268 34-126 (534)
117 3g5w_A Multicopper oxidase typ 46.7 9.8 0.00034 35.4 2.6 80 190-269 36-128 (318)
118 2q9o_A Laccase-1; multicopper 46.1 11 0.00038 37.9 3.1 78 188-268 67-159 (559)
119 1aoz_A Ascorbate oxidase; oxid 45.5 17 0.00058 36.4 4.3 78 188-268 34-125 (552)
120 1yel_A AT1G16640; CESG, protei 45.4 7.1 0.00024 30.3 1.2 26 6-31 65-90 (104)
121 4i1k_A B3 domain-containing tr 44.8 6.3 0.00021 32.9 0.9 25 188-212 113-137 (146)
122 3ghp_A Cellulosomal scaffoldin 44.1 12 0.00043 33.3 2.7 23 21-46 40-66 (227)
123 3sqr_A Laccase; multicopper ox 41.8 20 0.00068 36.5 4.2 77 189-268 99-189 (580)
124 1aoz_A Ascorbate oxidase; oxid 41.0 28 0.00094 34.8 5.0 76 17-94 36-124 (552)
125 1cyx_A CYOA; electron transpor 40.2 21 0.00071 31.7 3.5 85 163-265 18-115 (205)
126 3t6v_A Laccase; beta barrel, o 39.2 23 0.00078 35.1 4.1 77 189-268 36-131 (495)
127 1zpu_A Iron transport multicop 38.4 30 0.001 34.6 4.8 76 17-94 36-125 (534)
128 3pxl_A Laccase; 4-copper prote 37.8 25 0.00084 35.0 4.1 77 189-268 35-130 (499)
129 2q9o_A Laccase-1; multicopper 37.6 20 0.00069 36.0 3.4 74 17-93 69-157 (559)
130 3hb3_B Cytochrome C oxidase su 36.2 27 0.00091 32.7 3.8 67 189-267 190-265 (298)
131 2gsm_B Cytochrome C oxidase su 35.5 29 0.00098 31.7 3.8 67 188-266 171-246 (262)
132 1sdd_A Coagulation factor V; c 33.4 6.8 0.00023 36.1 -0.8 79 189-267 216-301 (306)
133 1v54_B Cytochrome C oxidase po 33.3 27 0.00092 31.2 3.2 30 235-266 183-215 (227)
134 1sdd_A Coagulation factor V; c 32.6 7.5 0.00026 35.9 -0.7 79 16-94 216-301 (306)
135 1cyx_A CYOA; electron transpor 32.4 27 0.00092 31.0 3.0 78 3-92 25-115 (205)
136 3sqr_A Laccase; multicopper ox 32.4 39 0.0013 34.3 4.6 33 61-93 155-187 (580)
137 1fft_B Ubiquinol oxidase; elec 30.7 94 0.0032 29.1 6.6 85 163-265 128-225 (315)
138 3l6w_A Hemocyanin 1; cupredoxi 29.8 37 0.0013 33.9 3.8 75 189-265 412-491 (491)
139 3t6v_A Laccase; beta barrel, o 29.5 44 0.0015 33.0 4.3 34 61-94 96-130 (495)
140 3pxl_A Laccase; 4-copper prote 28.8 46 0.0016 33.0 4.3 34 61-94 95-129 (499)
141 3l6w_A Hemocyanin 1; cupredoxi 28.8 37 0.0013 34.0 3.6 74 17-92 413-491 (491)
142 3hb3_B Cytochrome C oxidase su 28.6 38 0.0013 31.6 3.4 30 62-93 232-264 (298)
143 1yel_A AT1G16640; CESG, protei 27.9 19 0.00065 27.8 1.1 18 188-205 74-91 (104)
144 2uxt_A Protein SUFI, SUFI; oxi 27.4 21 0.00072 34.7 1.5 78 189-268 51-140 (451)
145 2gsm_B Cytochrome C oxidase su 27.2 42 0.0014 30.6 3.4 30 62-93 214-246 (262)
146 1v54_B Cytochrome C oxidase po 25.1 40 0.0014 30.0 2.8 30 62-93 183-215 (227)
147 3cg8_A Laccase; oxidoreductase 24.7 58 0.002 30.4 4.0 31 66-96 279-309 (343)
148 4dny_A Metalloprotease STCE; m 24.7 31 0.001 28.3 1.8 35 163-203 79-113 (126)
149 2r7e_B Coagulation factor VIII 24.6 25 0.00084 37.0 1.5 30 240-269 269-300 (770)
150 1v10_A Laccase; multicopper bl 24.3 44 0.0015 33.1 3.3 34 235-268 117-151 (521)
151 2uxt_A Protein SUFI, SUFI; oxi 23.6 24 0.00082 34.4 1.1 76 18-94 53-139 (451)
152 1wid_A DNA-binding protein RAV 21.6 33 0.0011 27.7 1.4 21 11-31 84-104 (130)
153 2hzs_I RNA polymerase II media 21.1 1.8 6.2E-05 25.5 -4.5 19 189-207 4-22 (27)
154 2xu9_A Laccase; oxidoreductase 21.0 88 0.003 30.0 4.6 77 190-266 49-135 (439)
155 2qcp_X Cation efflux system pr 20.9 36 0.0012 25.3 1.4 15 17-31 52-66 (80)
156 1hfu_A Laccase 1; oxidoreducta 20.8 47 0.0016 32.7 2.6 78 188-268 34-130 (503)
157 2vb2_X Copper protein, cation 20.6 37 0.0013 25.8 1.4 15 17-31 60-74 (88)
158 2z0t_A Putative uncharacterize 20.6 39 0.0013 26.9 1.6 12 189-200 31-42 (109)
159 2j5w_A Ceruloplasmin, ferroxid 20.4 39 0.0013 36.8 2.0 81 16-100 633-724 (1065)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=3.4e-39 Score=275.72 Aligned_cols=109 Identities=40% Similarity=0.777 Sum_probs=101.3
Q ss_pred CceEEEEeccCCcccCCCCCcCcccccCCCeeeecCEEEEeeCCCCceEEEE-ccccccCCCCCCCcccCCCCCcEEEe-
Q 020242 161 QPATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEV-TKAAYDSCNSSSTISKSTNPPTRITL- 238 (329)
Q Consensus 161 ~~~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~h~V~~V-~~~~y~~C~~~~~i~~~~~G~~~v~L- 238 (329)
.+++|+|||+.||+++.+ ..+|++||++++|+|||+|+|+|..++|+|+|| ++++|+.|+..+++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 467899999999999753 468999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCCCCCCeEEEEecCCCCC
Q 020242 239 GTAGEHYFFCTFPGHCSAGQKLAVNVTGGSST 270 (329)
Q Consensus 239 ~~~G~~YFic~~~~HC~~GmKl~I~V~~~~~~ 270 (329)
+++|++||||++++||++||||+|+|.+..+.
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~ 112 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANAT 112 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC--
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCCC
Confidence 99999999999999999999999999987654
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=2.9e-37 Score=254.12 Aligned_cols=106 Identities=42% Similarity=0.822 Sum_probs=98.3
Q ss_pred ceEEEEeccCCcccCCCCCcCcccccCCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCCcccCCCCCcEEEeCCC
Q 020242 162 PATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTA 241 (329)
Q Consensus 162 ~~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~L~~~ 241 (329)
+++|+|||+.||++++ ..+|++||++++|+|||+|+|+|.++.|+|+||++++|+.|+..+++..+++|++.|+|+++
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 5689999999999863 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCCCCCCCCeEEEEecCCCC
Q 020242 242 GEHYFFCTFPGHCSAGQKLAVNVTGGSS 269 (329)
Q Consensus 242 G~~YFic~~~~HC~~GmKl~I~V~~~~~ 269 (329)
|++||||++++||++||||+|+|.+..+
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCCC
Confidence 9999999999999999999999987654
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=9.1e-37 Score=253.71 Aligned_cols=106 Identities=42% Similarity=0.810 Sum_probs=97.2
Q ss_pred eEEEEeccCCcccCCCCCcCcccccCCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCCcccCCCCCcEEEeCCCC
Q 020242 163 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAG 242 (329)
Q Consensus 163 ~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~L~~~G 242 (329)
++|+|||+.||+++. ...+|+.|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|++.|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~-~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS-DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCS-STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCC-CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 479999999999873 3568999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCeEEE-EecCCCC
Q 020242 243 EHYFFCTFPGHCSAGQKLAV-NVTGGSS 269 (329)
Q Consensus 243 ~~YFic~~~~HC~~GmKl~I-~V~~~~~ 269 (329)
++||||++++||++||||+| +|.+.++
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred CEEEECCCCCccccCCEEEEEEECCCCC
Confidence 99999999999999999999 7776553
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=2.3e-35 Score=237.61 Aligned_cols=96 Identities=41% Similarity=0.873 Sum_probs=92.1
Q ss_pred eEEEEeccCCcccCCCCCcCcccccCCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCCcccCCCCCcEEEeCCCC
Q 020242 163 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAG 242 (329)
Q Consensus 163 ~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~L~~~G 242 (329)
++|+|||+.||++ +|++||++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|++.|+| ++|
T Consensus 1 ~~~~VG~~~GW~~------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g 73 (96)
T 2cbp_A 1 AVYVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKG 73 (96)
T ss_dssp CEEETTGGGCSCS------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSE
T ss_pred CEEEECCcCCCcc------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCC
Confidence 3799999999996 499999999999999999999999999999999999999999999999999999999 899
Q ss_pred cEEEEcCCCCCCCCCCeEEEEec
Q 020242 243 EHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 243 ~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
++||||++++||++||||+|+|+
T Consensus 74 ~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 74 QSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEEECCSTTTGGGTCEEEEEEC
T ss_pred CEEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999985
No 5
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=99.98 E-value=1.6e-33 Score=240.57 Aligned_cols=90 Identities=31% Similarity=0.496 Sum_probs=85.0
Q ss_pred CChhhccCCCceeeCCEEEEEEcCCCCcEEEe-CcccccCCCCCCCCcccCCCCcEEEe-cccCceEEEcCCCCCCCCCC
Q 020242 8 SDIDVFLCLFSFFFFTFSVFNFAAGNHDVTRV-TQSSFNACNTTSPLSRTTNSPASVTL-TASGPHYFICSFPGHCLGGQ 85 (329)
Q Consensus 8 ~~y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V-~~~~y~~C~~~~~~~~~~~G~~~v~L-~~~G~~yFiCs~~~HC~~Gm 85 (329)
.||++|+++++|+|||+|+|+|..++|+|+|| ++++|+.|+..+++..+++|+++|+| +++|++||||++++||++||
T Consensus 21 ~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~~~G~~YFicg~~gHC~~Gm 100 (138)
T 1jer_A 21 NFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQ 100 (138)
T ss_dssp THHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECCSSEEEEEECCSTTTGGGTC
T ss_pred cchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEeccCCcCEEEEcCCCCccccCC
Confidence 56999999999999999999999999999999 99999999999999999999999999 99999999999999999999
Q ss_pred eEEEEeecCCCC
Q 020242 86 KLAINVSARGSS 97 (329)
Q Consensus 86 Kl~I~V~~~~~~ 97 (329)
||+|+|....+.
T Consensus 101 Kl~I~V~~~~~~ 112 (138)
T 1jer_A 101 KLSINVVAANAT 112 (138)
T ss_dssp EEEEEEECCC--
T ss_pred EEEEEEcCCCCC
Confidence 999999876553
No 6
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=8.6e-32 Score=214.74 Aligned_cols=91 Identities=40% Similarity=0.793 Sum_probs=85.9
Q ss_pred eEEEEeccCCcccCCCCCcCcccccCCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCCcccCCCCCcEEEeCCCC
Q 020242 163 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAG 242 (329)
Q Consensus 163 ~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~L~~~G 242 (329)
++|+| ||+++ +.|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|++.|+|+ +|
T Consensus 1 ~~y~V----gW~~~-------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g 68 (91)
T 1f56_A 1 AVYNI----GWSFN-------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RG 68 (91)
T ss_dssp CEEEE----ECSSS-------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SE
T ss_pred CEEEE----eCCCC-------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CC
Confidence 36889 89973 89999999999999999999999999999999999999999999999999999996 89
Q ss_pred cEEEEcCCCCCCCCCCeEEEEec
Q 020242 243 EHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 243 ~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
++||||++++||++||||+|+|.
T Consensus 69 ~~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 69 QNYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEC
T ss_pred CeEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999984
No 7
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=99.97 E-value=6.4e-32 Score=217.46 Aligned_cols=90 Identities=30% Similarity=0.529 Sum_probs=86.1
Q ss_pred CccccCCChhhccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCCCcccCCCCcEEEecccCceEEEcCCCCCC
Q 020242 2 DRAELISDIDVFLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHC 81 (329)
Q Consensus 2 ~~~~~~~~y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFiCs~~~HC 81 (329)
|..+|..+|+.|+++++|++||+|+|+|.+++|+|+||++++|+.|+.++++..+++|+++|+| ++|++||||++++||
T Consensus 7 ~~~GW~~~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~~yFic~~~~HC 85 (96)
T 2cbp_A 7 GSGGWTFNTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQSYFICNFPGHC 85 (96)
T ss_dssp GGGCSCSSCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEEEEEECCSTTTG
T ss_pred CcCCCccChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCCEEEEcCCCCcc
Confidence 4567889999999999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred CCCCeEEEEee
Q 020242 82 LGGQKLAINVS 92 (329)
Q Consensus 82 ~~GmKl~I~V~ 92 (329)
++||||+|+|+
T Consensus 86 ~~Gmkl~I~Vl 96 (96)
T 2cbp_A 86 QSGMKIAVNAL 96 (96)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCEEEEEEC
Confidence 99999999985
No 8
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=99.97 E-value=6.2e-32 Score=222.30 Aligned_cols=93 Identities=32% Similarity=0.570 Sum_probs=85.7
Q ss_pred cccC--CChhhccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCCCcccCCCCcEEEecccCceEEEcCCCCCC
Q 020242 4 AELI--SDIDVFLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHC 81 (329)
Q Consensus 4 ~~~~--~~y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFiCs~~~HC 81 (329)
|+.. .||+.|+++++|++||+|+|+|..++|+|+||++++|+.|+.++++..+++|+++|+|+++|++||||++++||
T Consensus 13 W~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G~~yFic~~~gHC 92 (109)
T 1ws8_A 13 WTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHC 92 (109)
T ss_dssp SCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSSEEEEEECCSTTTT
T ss_pred ccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCCcCEEEECCCCCcc
Confidence 4445 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecCCC
Q 020242 82 LGGQKLAINVSARGS 96 (329)
Q Consensus 82 ~~GmKl~I~V~~~~~ 96 (329)
++||||+|+|....+
T Consensus 93 ~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 93 QLGQKVEIKVDPGSS 107 (109)
T ss_dssp TTTCEEEEEECC---
T ss_pred cCCCEEEEEEcCCCC
Confidence 999999999986543
No 9
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=99.97 E-value=1.5e-31 Score=222.22 Aligned_cols=87 Identities=37% Similarity=0.614 Sum_probs=82.7
Q ss_pred CChhhccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCCCcccCCCCcEEEecccCceEEEcCCCCCCCCCCeE
Q 020242 8 SDIDVFLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKL 87 (329)
Q Consensus 8 ~~y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~GmKl 87 (329)
.||+.|+++++|++||+|+|+|.+++|+|+||++++|++|+..+++..+++|+++|+|+++|++||||++++||++||||
T Consensus 19 ~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmkl 98 (116)
T 1x9u_A 19 KFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKL 98 (116)
T ss_dssp THHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCEEEEEECCSTTTTTTTCEE
T ss_pred cchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCCCEEEECCCCCccccCCEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EE-EeecC
Q 020242 88 AI-NVSAR 94 (329)
Q Consensus 88 ~I-~V~~~ 94 (329)
+| +|...
T Consensus 99 ~In~V~~~ 106 (116)
T 1x9u_A 99 SINVVGAG 106 (116)
T ss_dssp EEEEECC-
T ss_pred EEEEECCC
Confidence 99 77644
No 10
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.96 E-value=4e-30 Score=205.07 Aligned_cols=86 Identities=33% Similarity=0.528 Sum_probs=81.1
Q ss_pred ccCCChhhccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCCCcccCCCCcEEEecccCceEEEcCCCCCCCCC
Q 020242 5 ELISDIDVFLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGG 84 (329)
Q Consensus 5 ~~~~~y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~G 84 (329)
+|..+ +.|+++++|++||+|+|+|.+++|+|+||++++|+.|+.++++..+++|+++|+|+ +|++||||++++||++|
T Consensus 6 gW~~~-~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~~yFic~~~~HC~~G 83 (91)
T 1f56_A 6 GWSFN-VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQNYFICSFPGHCGGG 83 (91)
T ss_dssp ECSSS-CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEEEEEECCSTTTTTTT
T ss_pred eCCCC-CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCCeEEEcCCCCccccC
Confidence 45556 99999999999999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred CeEEEEee
Q 020242 85 QKLAINVS 92 (329)
Q Consensus 85 mKl~I~V~ 92 (329)
|||+|+|.
T Consensus 84 mkl~I~v~ 91 (91)
T 1f56_A 84 MKIAINAK 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 11
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.15 E-value=4.7e-11 Score=100.50 Aligned_cols=95 Identities=20% Similarity=0.322 Sum_probs=65.4
Q ss_pred CceEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-----CCceEEEEccc-cccCC-------------
Q 020242 161 QPATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-----RVHDVVEVTKA-AYDSC------------- 220 (329)
Q Consensus 161 ~~~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-----~~h~V~~V~~~-~y~~C------------- 220 (329)
...++.|+-. .+|.+.+ ..++++.||+|.|.|.+ ..|+++..... ++..+
T Consensus 15 ~~~~v~V~~~~~~~~F~P----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (140)
T 1qhq_A 15 PAQTVEVRAAPDALAFAQ----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALF 84 (140)
T ss_dssp CSEEEEEEBCSSSSSBSC----------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTT
T ss_pred CCEEEEEEEeCCCceEeC----------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccc
Confidence 3457777754 3577543 56899999999998865 57999887432 22110
Q ss_pred ----CCCC------CcccCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 221 ----NSSS------TISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 221 ----~~~~------~i~~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
+..+ .+....++..+|+++++|.|||+|++.+||+.|||+.|+|.
T Consensus 85 ~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 85 VPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 0001 11122233456888899999999999999999999999995
No 12
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.06 E-value=2.2e-10 Score=88.61 Aligned_cols=86 Identities=16% Similarity=0.188 Sum_probs=61.7
Q ss_pred eEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEccccccCCCCCCCcccCCCC-CcEEEeC
Q 020242 163 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYDSCNSSSTISKSTNP-PTRITLG 239 (329)
Q Consensus 163 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~~y~~C~~~~~i~~~~~G-~~~v~L~ 239 (329)
.++.||++ .+|.+.+ ..+++++||+|+|.+.. ..|+|.......+. .....+..| ...++++
T Consensus 3 ~~v~~~~~~~~~~f~P----------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-----~~~~~~~~g~~~~~~f~ 67 (91)
T 1bxv_A 3 VAIKMGADNGMLAFEP----------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-----HKDLAFSPGETFEATFS 67 (91)
T ss_dssp EEEEESCTTSCSSEES----------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC-----EEEEECSTTCEEEEECC
T ss_pred EEEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC-----cccceeCCCCEEEEEeC
Confidence 35667764 4465433 56899999999999874 68999976533221 001123334 4678899
Q ss_pred CCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 240 TAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 240 ~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
++|.|+|+|. .||..||+..|.|.
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999984
No 13
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.94 E-value=5.5e-10 Score=96.32 Aligned_cols=77 Identities=19% Similarity=0.256 Sum_probs=59.0
Q ss_pred CCCeeeecCEEEEeeCCC----CceEEEEcc-ccccCCCCCCCcc-------cCCCC---Cc--EEEeCCCCcEEEEcCC
Q 020242 188 RNNNFSVGDILVFDYPAR----VHDVVEVTK-AAYDSCNSSSTIS-------KSTNP---PT--RITLGTAGEHYFFCTF 250 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~----~h~V~~V~~-~~y~~C~~~~~i~-------~~~~G---~~--~v~L~~~G~~YFic~~ 250 (329)
..+++++||+|+|++.+. .|++.+++. ..|+.|.....+. ....| .. +|++ ++|.|||+|..
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~ 139 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQI 139 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCS
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCC
Confidence 358999999999999643 599999854 4787787654332 11223 23 5678 99999999999
Q ss_pred CCCCCCCCeEEEEec
Q 020242 251 PGHCSAGQKLAVNVT 265 (329)
Q Consensus 251 ~~HC~~GmKl~I~V~ 265 (329)
++||+.|||..|.|.
T Consensus 140 ~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 140 PGMAATGMFGKIVVK 154 (154)
T ss_dssp TTTGGGTCEEEEEEC
T ss_pred CCHHHCCCEEEEEEC
Confidence 999999999999984
No 14
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.89 E-value=6.9e-10 Score=93.28 Aligned_cols=79 Identities=23% Similarity=0.350 Sum_probs=55.1
Q ss_pred cCCCceeeCCEEEEEEcC-----CCCcEEEeCcc-cccC--------------CCC---CCC---CcccCCC---CcEEE
Q 020242 14 LCLFSFFFFTFSVFNFAA-----GNHDVTRVTQS-SFNA--------------CNT---TSP---LSRTTNS---PASVT 64 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-----~~H~V~~V~~~-~y~~--------------C~~---~~~---~~~~~~G---~~~v~ 64 (329)
...++++.||+|+|.|.+ ..|+++..... ++.. ... .+. ......| ..+|+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 455799999999999976 47998876422 2211 100 000 0112233 34577
Q ss_pred ecccCceEEEcCCCCCCCCCCeEEEEee
Q 020242 65 LTASGPHYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 65 L~~~G~~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
++++|.|||+|++++||..|||+.|+|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 8899999999999999999999999996
No 15
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.89 E-value=1.1e-09 Score=94.30 Aligned_cols=76 Identities=14% Similarity=0.235 Sum_probs=58.0
Q ss_pred CCceeeCCEEEEEEcCC----CCcEEEeC-cccccCCCCCCCCc-------ccCCCC---c--EEEecccCceEEEcCCC
Q 020242 16 LFSFFFFTFSVFNFAAG----NHDVTRVT-QSSFNACNTTSPLS-------RTTNSP---A--SVTLTASGPHYFICSFP 78 (329)
Q Consensus 16 ~~tf~vGD~LvF~y~~~----~H~V~~V~-~~~y~~C~~~~~~~-------~~~~G~---~--~v~L~~~G~~yFiCs~~ 78 (329)
.+++++||+|+|+|.+. .|+++.++ ...|+.|.....+. ....|. . +|++ ++|.|||+|+++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 36889999999999753 59999884 45787786554321 112332 3 4677 999999999999
Q ss_pred CCCCCCCeEEEEee
Q 020242 79 GHCLGGQKLAINVS 92 (329)
Q Consensus 79 ~HC~~GmKl~I~V~ 92 (329)
+||+.||+..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999883
No 16
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.84 E-value=1.1e-08 Score=84.96 Aligned_cols=73 Identities=19% Similarity=0.187 Sum_probs=54.1
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCCc-ccCCCC-CcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTI-SKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~i-~~~~~G-~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
..+++++||+|+|.+....|+|+... .|...+.. .....| ...++++++|.|+|+|. .||+.||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 56899999999999987789998642 12211110 011123 35789999999999998 49999999999998
Q ss_pred CC
Q 020242 266 GG 267 (329)
Q Consensus 266 ~~ 267 (329)
..
T Consensus 94 ~~ 95 (123)
T 1pmy_A 94 DK 95 (123)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 17
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.81 E-value=1.3e-08 Score=84.65 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=53.4
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCC--CcccCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSS--TISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~--~i~~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
..+++++||+|.|.+....|+|+... .|...+ ....-......++++++|.|+|+|. .||++||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEc
Confidence 56899999999999987789998531 222111 1111112235789999999999998 59999999999997
Q ss_pred C
Q 020242 266 G 266 (329)
Q Consensus 266 ~ 266 (329)
.
T Consensus 94 ~ 94 (123)
T 1paz_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 6
No 18
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.75 E-value=5.3e-09 Score=80.75 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=53.3
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCcccccCCCCCCCCcccCCC-CcEEEecccCceEEEcCCCCCCCCCCeEEEEe
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQSSFNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLAINV 91 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~~y~~C~~~~~~~~~~~G-~~~v~L~~~G~~yFiCs~~~HC~~GmKl~I~V 91 (329)
...+++++||+|+|.+.. ..|+|+......+. ........| ..+++++++|.++|+|. .||..||+..|.|
T Consensus 18 P~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-----~~~~~~~~g~~~~~~f~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-----HKDLAFSPGETFEATFSEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEETTCGGGC-----EEEEECSTTCEEEEECCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCEEEECCCCEEEEEECCCCCcEEEEeCCCccC-----cccceeCCCCEEEEEeCCCEEEEEEeC--CCccCCCEEEEEE
Confidence 445799999999999874 57999865433221 001123334 46788999999999999 8999999999988
Q ss_pred e
Q 020242 92 S 92 (329)
Q Consensus 92 ~ 92 (329)
.
T Consensus 91 ~ 91 (91)
T 1bxv_A 91 Q 91 (91)
T ss_dssp C
T ss_pred C
Confidence 3
No 19
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.75 E-value=1e-08 Score=81.00 Aligned_cols=91 Identities=22% Similarity=0.249 Sum_probs=60.8
Q ss_pred eEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEccc---cccCCCCCCCcccCCCCC-cEE
Q 020242 163 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKA---AYDSCNSSSTISKSTNPP-TRI 236 (329)
Q Consensus 163 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~---~y~~C~~~~~i~~~~~G~-~~v 236 (329)
.++.+|++ .++.+.+ ..+++++||+|.|.+.. ..|+|...+.. .++.+........+..|. ..+
T Consensus 2 ~~V~m~~~~~~~~F~P----------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~ 71 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVP----------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVR 71 (98)
T ss_dssp EEEEESCTTSCCSEES----------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEecCCCCcEEeC----------CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEE
Confidence 35566553 4455433 56899999999998875 48999865421 222221111001233443 478
Q ss_pred EeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 237 TLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 237 ~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
+++++|.|+|+|.. ||+.||+..|.|.
T Consensus 72 tf~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 72 KLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EcCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 89999999999996 9999999999984
No 20
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.73 E-value=4.1e-08 Score=82.33 Aligned_cols=94 Identities=20% Similarity=0.309 Sum_probs=64.1
Q ss_pred CceEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCCC----CceEEEEccc------------------cc
Q 020242 161 QPATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPAR----VHDVVEVTKA------------------AY 217 (329)
Q Consensus 161 ~~~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~----~h~V~~V~~~------------------~y 217 (329)
...++.||.. .++.+.+ ..+++++||+|.|.|.+. .|+++.+... +|
T Consensus 17 ~~~~V~v~~~~~~~~F~p----------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~ 86 (139)
T 2aan_A 17 GPVTIEIGSKGEELAFDK----------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANY 86 (139)
T ss_dssp CCEEEEEEBCTTSSSBSC----------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTT
T ss_pred cCEEEEEEecCCccEEcC----------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccc
Confidence 4456777532 3455432 568899999999887543 6999987532 46
Q ss_pred cCCCCCCCc---ccCCCCC-c--EEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 218 DSCNSSSTI---SKSTNPP-T--RITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 218 ~~C~~~~~i---~~~~~G~-~--~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
..|...+.+ ..+..|. . +|+++++|.|+|+|.+.+||+ ||+..|.|.
T Consensus 87 ~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 87 LPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 666533221 1233443 2 445558999999999999999 999999984
No 21
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.73 E-value=3.3e-08 Score=78.58 Aligned_cols=91 Identities=23% Similarity=0.196 Sum_probs=59.9
Q ss_pred eEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEcccccc-----CCCCCCCcccCCCC-Cc
Q 020242 163 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYD-----SCNSSSTISKSTNP-PT 234 (329)
Q Consensus 163 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~~y~-----~C~~~~~i~~~~~G-~~ 234 (329)
.++.||.+ .++.+.+ ..+++++||+|.|.+.. ..|+|...+....+ .............| ..
T Consensus 4 ~~V~~~~~~~~~~F~P----------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~ 73 (106)
T 2gim_A 4 YTVKLGSDKGLLVFEP----------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQST 73 (106)
T ss_dssp EEEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEE
T ss_pred EEEEEEecCCcceEcC----------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEE
Confidence 35667653 4565433 56899999999999765 57999864322100 00000001112333 35
Q ss_pred EEEe---CCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 235 RITL---GTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 235 ~v~L---~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
.+++ +++|.|+|+|. .||++||+..|+|.
T Consensus 74 ~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 74 STTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 7788 89999999999 89999999999996
No 22
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.71 E-value=3.1e-08 Score=77.99 Aligned_cols=75 Identities=24% Similarity=0.370 Sum_probs=53.1
Q ss_pred CCCeeeecCEEEEeeCCC-CceEEEEccc---cccCCCC---CCCcccCCCC-CcEEEeCCCCcEEEEcCCCCCCCCCCe
Q 020242 188 RNNNFSVGDILVFDYPAR-VHDVVEVTKA---AYDSCNS---SSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQK 259 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-~h~V~~V~~~---~y~~C~~---~~~i~~~~~G-~~~v~L~~~G~~YFic~~~~HC~~GmK 259 (329)
..+++++||+|+|.+... .|+|...+.. ..+.+.. ...+ .+..| ...++++++|.|+|+|. +||+.||+
T Consensus 17 ~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~-~~~~G~~~~~tf~~~G~y~~~C~--~H~~~gM~ 93 (99)
T 1plc_A 17 SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDL-LNAKGETFEVALSNKGEYSFYCS--PHQGAGMV 93 (99)
T ss_dssp SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCC-BCSTTCEEEEECCSCEEEEEECG--GGTTTTCE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCcc-ccCCCCEEEEEECCCceEEEEcC--CCcccCCE
Confidence 568999999999988764 7999865431 1121110 0111 12333 35788999999999999 89999999
Q ss_pred EEEEec
Q 020242 260 LAVNVT 265 (329)
Q Consensus 260 l~I~V~ 265 (329)
..|+|.
T Consensus 94 G~i~V~ 99 (99)
T 1plc_A 94 GKVTVN 99 (99)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999984
No 23
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.70 E-value=2.6e-08 Score=82.91 Aligned_cols=72 Identities=19% Similarity=0.206 Sum_probs=54.7
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCC--cccCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSST--ISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~--i~~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
+..++++||+|.|.+.+..|+|...+. |...+. ...-......++++++|.|+|+|. .||..||+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 678999999999999887899986432 222111 111112346889999999999999 79999999999998
Q ss_pred C
Q 020242 266 G 266 (329)
Q Consensus 266 ~ 266 (329)
.
T Consensus 94 ~ 94 (123)
T 3erx_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 6
No 24
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.70 E-value=6.1e-08 Score=75.88 Aligned_cols=90 Identities=23% Similarity=0.311 Sum_probs=60.4
Q ss_pred eEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEcccc---ccCCCCCCCcccCCCCCcEEE
Q 020242 163 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAA---YDSCNSSSTISKSTNPPTRIT 237 (329)
Q Consensus 163 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~~---y~~C~~~~~i~~~~~G~~~v~ 237 (329)
.++.+|++ .++.+.+ ..+++++||+|+|.+.. ..|+|...+... .+.+.... ..........++
T Consensus 3 ~~V~~~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~t 71 (97)
T 1b3i_A 3 VQIKMGTDKYAPLYEP----------KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK-LAIAPGSFYSVT 71 (97)
T ss_dssp EEEEEEETTTEEEEES----------SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC-CCCSCSCCEEEE
T ss_pred EEEEEeccCCccEEeC----------CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc-eecCCCCEEEEE
Confidence 35667653 4565433 56899999999999865 479998654321 00111111 111122346788
Q ss_pred eCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 238 LGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 238 L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
++++|.|+|+|. +||+.||+..|.|.
T Consensus 72 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 72 LGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred eCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999999 89999999999984
No 25
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.69 E-value=5.1e-08 Score=81.57 Aligned_cols=74 Identities=18% Similarity=0.189 Sum_probs=55.3
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCC--cccCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSST--ISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~--i~~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
...++++||+|.|.+.+..|+|...+. +..... ...-......++++++|.|+|+|. .||..||+..|.|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 578999999999999877899986432 111111 111112346899999999999999 69999999999998
Q ss_pred CCC
Q 020242 266 GGS 268 (329)
Q Consensus 266 ~~~ 268 (329)
...
T Consensus 96 ~~~ 98 (127)
T 3tu6_A 96 EPA 98 (127)
T ss_dssp SCT
T ss_pred cCC
Confidence 643
No 26
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.67 E-value=5.5e-08 Score=81.15 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=54.8
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCCcc-cCCC-CCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTIS-KSTN-PPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~i~-~~~~-G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
+..++++||+|.|.+....|+|...+. +...+... .... ....++++++|.|.|+|. .||..||+..|+|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 578999999999999888999986432 22221111 1122 346889999999999997 69999999999998
Q ss_pred C
Q 020242 266 G 266 (329)
Q Consensus 266 ~ 266 (329)
.
T Consensus 95 ~ 95 (124)
T 3ef4_A 95 K 95 (124)
T ss_dssp S
T ss_pred C
Confidence 6
No 27
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.64 E-value=6.2e-08 Score=76.13 Aligned_cols=76 Identities=22% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCCeeeecCEEEEeeCCC-CceEEEEccc---cccCCCCC--CCcccCCCC-CcEEEeCCCCcEEEEcCCCCCCCCCCeE
Q 020242 188 RNNNFSVGDILVFDYPAR-VHDVVEVTKA---AYDSCNSS--STISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKL 260 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-~h~V~~V~~~---~y~~C~~~--~~i~~~~~G-~~~v~L~~~G~~YFic~~~~HC~~GmKl 260 (329)
..+++++||+|+|.+... .|+|...+.. .++.+... .....+..| ...++++++|.|+|+|. .||++||+.
T Consensus 17 ~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~~~G~y~~~C~--~H~~~gM~G 94 (99)
T 1byp_A 17 SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCA--PHAGAGMVG 94 (99)
T ss_dssp SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECG--GGTTTTCEE
T ss_pred CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeCCCcEEEEEcC--CccccCCEE
Confidence 567899999999988764 7998865421 22222110 000122334 35788999999999999 899999999
Q ss_pred EEEec
Q 020242 261 AVNVT 265 (329)
Q Consensus 261 ~I~V~ 265 (329)
.|.|.
T Consensus 95 ~i~V~ 99 (99)
T 1byp_A 95 KVTVN 99 (99)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 28
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.63 E-value=5.1e-08 Score=77.02 Aligned_cols=90 Identities=22% Similarity=0.254 Sum_probs=60.2
Q ss_pred EEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEcccccc----CCCCCCCc----ccCCCC-
Q 020242 164 THVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYD----SCNSSSTI----SKSTNP- 232 (329)
Q Consensus 164 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~~y~----~C~~~~~i----~~~~~G- 232 (329)
++.||++ .++.+ .. ..+++++||+|.|.+.. ..|+|...+...++ .|.....+ ..+..|
T Consensus 2 ~V~~g~~~~~~~F--------~P--~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~ 71 (102)
T 1kdj_A 2 KVEVGDEVGNFKF--------YP--DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEP 71 (102)
T ss_dssp EEEESCTTCCCCE--------ES--SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBC
T ss_pred EEEEecCCCccEE--------eC--CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCC
Confidence 4567763 33443 32 56899999999998765 47999875433321 11111111 112333
Q ss_pred CcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 233 PTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 233 ~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
...++++++|.|+|+|. .||++||+..|.|.
T Consensus 72 ~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 72 SFKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 35778899999999999 89999999999984
No 29
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.59 E-value=1e-07 Score=79.23 Aligned_cols=74 Identities=19% Similarity=0.159 Sum_probs=54.1
Q ss_pred cCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCCC-cccCCC-CcEEEecccCceEEEcCCCCCCCCCCeEEEEe
Q 020242 14 LCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSPL-SRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLAINV 91 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~~-~~~~~G-~~~v~L~~~G~~yFiCs~~~HC~~GmKl~I~V 91 (329)
...+++.+||+|+|.+....|+|+... .|...... .....| ..+++++++|.|+|+|+ .||..||+..|+|
T Consensus 20 P~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V 92 (123)
T 1pmy_A 20 PALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVV 92 (123)
T ss_dssp SSEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEE
T ss_pred CCEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEE
Confidence 455789999999999987789997542 23222111 011123 35789999999999998 5999999999999
Q ss_pred ecC
Q 020242 92 SAR 94 (329)
Q Consensus 92 ~~~ 94 (329)
...
T Consensus 93 ~~~ 95 (123)
T 1pmy_A 93 GDK 95 (123)
T ss_dssp SSC
T ss_pred cCC
Confidence 753
No 30
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.58 E-value=4.2e-08 Score=76.88 Aligned_cols=91 Identities=22% Similarity=0.231 Sum_probs=60.0
Q ss_pred eEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCCC-CceEEEEccc---cccCCCCCCCcccCCCCC-cEE
Q 020242 163 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPAR-VHDVVEVTKA---AYDSCNSSSTISKSTNPP-TRI 236 (329)
Q Consensus 163 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~-~h~V~~V~~~---~y~~C~~~~~i~~~~~G~-~~v 236 (329)
.++.+|++ .++.+.+ ...++++||+|.|.+... .|+|...... +++.+........+..|. ..+
T Consensus 2 ~~V~m~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~ 71 (98)
T 2plt_A 2 ATVKLGADSGALEFVP----------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSV 71 (98)
T ss_dssp EEEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEecCCCCceEeC----------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEE
Confidence 45667643 3455432 458899999999988754 7999865321 122111000001233343 478
Q ss_pred EeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 237 TLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 237 ~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
+++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 72 KLTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp ECCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred EeCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 8899999999999 79999999999984
No 31
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.54 E-value=1.1e-07 Score=78.99 Aligned_cols=74 Identities=15% Similarity=0.053 Sum_probs=54.7
Q ss_pred ccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCC--CcccCCCCcEEEecccCceEEEcCCCCCCCCCCeEEEE
Q 020242 13 FLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAIN 90 (329)
Q Consensus 13 Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~GmKl~I~ 90 (329)
=.+..++++||+|.|.+....|+|+... .|..... ...-.....+++++++|.|+|+|. .||..||+..|.
T Consensus 19 ~P~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~ 91 (123)
T 3erx_A 19 EPAFVRAEPGDVINFVPTDKSHNVEAIK-----EILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQ 91 (123)
T ss_dssp ESSEEEECTTEEEEEEESSTTCCCEECT-----TSSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEE
T ss_pred eCCEEEECCCCEEEEEECCCCceEEEcC-----CcCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEE
Confidence 3456799999999999987789996532 1222211 111112336799999999999999 799999999999
Q ss_pred eec
Q 020242 91 VSA 93 (329)
Q Consensus 91 V~~ 93 (329)
|..
T Consensus 92 V~~ 94 (123)
T 3erx_A 92 VGD 94 (123)
T ss_dssp ESS
T ss_pred ECC
Confidence 975
No 32
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.54 E-value=1.3e-07 Score=78.57 Aligned_cols=76 Identities=14% Similarity=0.076 Sum_probs=55.1
Q ss_pred hhhccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCC--CcccCCC-CcEEEecccCceEEEcCCCCCCCCCCe
Q 020242 10 IDVFLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQK 86 (329)
Q Consensus 10 y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G-~~~v~L~~~G~~yFiCs~~~HC~~GmK 86 (329)
+..-...+++++||+|+|.+....|+|+.. +.|..... ... ..| ..+++++++|.|+|+|+ .||..||+
T Consensus 16 ~~F~P~~i~V~~GdtV~f~~~~~~H~v~~~-----~~~~p~~~~~~~~-~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~ 87 (123)
T 1paz_A 16 MVFEPAYIKANPGDTVTFIPVDKGHNVESI-----KDMIPEGAEKFKS-KINENYVLTVTQPGAYLVKCT--PHYAMGMI 87 (123)
T ss_dssp EEEESSEEEECTTCEEEEEESSSSCCCEEC-----TTCSCTTCCCCBC-CTTCCEEEECCSCEEEEEECT--TTGGGTCE
T ss_pred ceEeCCEEEECCCCEEEEEECCCCeEEEEe-----cccCCCCccceec-CCCCEEEEEeCCCEEEEEEeC--CcccCCCE
Confidence 333355679999999999998778999653 12322211 111 123 35789999999999998 59999999
Q ss_pred EEEEeec
Q 020242 87 LAINVSA 93 (329)
Q Consensus 87 l~I~V~~ 93 (329)
..|+|..
T Consensus 88 G~I~V~~ 94 (123)
T 1paz_A 88 ALIAVGD 94 (123)
T ss_dssp EEEEESS
T ss_pred EEEEEcC
Confidence 9999975
No 33
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.49 E-value=2.9e-07 Score=72.12 Aligned_cols=91 Identities=18% Similarity=0.161 Sum_probs=58.8
Q ss_pred eEEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEcccc--ccCCCCCCCcccCCCC-CcEEE
Q 020242 163 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAA--YDSCNSSSTISKSTNP-PTRIT 237 (329)
Q Consensus 163 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~~--y~~C~~~~~i~~~~~G-~~~v~ 237 (329)
.++.+|.+ .++.+.+ ...++++||+|+|.+.. ..|+|...+... .+.............| ...++
T Consensus 3 ~~V~~~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~t 72 (98)
T 1pcs_A 3 ATVKMGSDSGALVFEP----------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTST 72 (98)
T ss_dssp EEEEESCTTSCSSEES----------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEE
Confidence 35666643 4455432 56899999999999765 479998653210 0000000000112333 35678
Q ss_pred eCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 238 LGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 238 L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
++++|.|+|+|. .||..||+..|.|.
T Consensus 73 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 73 FTEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred cCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 899999999999 79999999999984
No 34
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.49 E-value=1.7e-07 Score=78.43 Aligned_cols=78 Identities=17% Similarity=0.097 Sum_probs=56.5
Q ss_pred hhhccCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCC--CcccCCCCcEEEecccCceEEEcCCCCCCCCCCeE
Q 020242 10 IDVFLCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKL 87 (329)
Q Consensus 10 y~~Wa~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~GmKl 87 (329)
+..=....++++||+|.|.+....|+|+..+. +..... ...-.....+++++++|.|+|+|. .||..||+.
T Consensus 18 ~~F~P~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G 90 (127)
T 3tu6_A 18 MAFEPAVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIG 90 (127)
T ss_dssp EEEESSEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEE
T ss_pred cEEeCCEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEE
Confidence 44445667999999999999877899965422 222111 111112236899999999999999 699999999
Q ss_pred EEEeecC
Q 020242 88 AINVSAR 94 (329)
Q Consensus 88 ~I~V~~~ 94 (329)
.|.|...
T Consensus 91 ~I~V~~~ 97 (127)
T 3tu6_A 91 AIVVGEP 97 (127)
T ss_dssp EEEESSC
T ss_pred EEEECcC
Confidence 9999864
No 35
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.45 E-value=4.4e-07 Score=76.02 Aligned_cols=78 Identities=17% Similarity=0.258 Sum_probs=54.9
Q ss_pred cCCCceeeCCEEEEEEcCC----CCcEEEeCcc------------------cccCCCCCCCC---cccCCCC-cEEEe--
Q 020242 14 LCLFSFFFFTFSVFNFAAG----NHDVTRVTQS------------------SFNACNTTSPL---SRTTNSP-ASVTL-- 65 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~----~H~V~~V~~~------------------~y~~C~~~~~~---~~~~~G~-~~v~L-- 65 (329)
...+++++||+|.|.|.+. .|+++.+... +|..|...+.+ .....|. .+|++
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~ 113 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA 113 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC
Confidence 3446899999999999754 6999877532 45555432211 1233443 34444
Q ss_pred cccCceEEEcCCCCCCCCCCeEEEEee
Q 020242 66 TASGPHYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 66 ~~~G~~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
+++|.|+|+|.+++||. ||+..|.|.
T Consensus 114 ~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 114 PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 48999999999999999 999999883
No 36
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.44 E-value=2.2e-07 Score=77.44 Aligned_cols=73 Identities=12% Similarity=0.027 Sum_probs=54.4
Q ss_pred cCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCCC-cccCCC-CcEEEecccCceEEEcCCCCCCCCCCeEEEEe
Q 020242 14 LCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSPL-SRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLAINV 91 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~~-~~~~~G-~~~v~L~~~G~~yFiCs~~~HC~~GmKl~I~V 91 (329)
....++++||+|.|.+....|+|+..+ .+...... .....| ..+++++++|.|+|+|. .||..||+..|.|
T Consensus 21 P~~i~V~~GDTV~f~n~~~~Hnv~~~~-----~~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V 93 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPTDKSHNAESVR-----EVWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQV 93 (124)
T ss_dssp SSEEEECTTCEEEEECSSSSCCCEECT-----TTSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCEEEECCCCEEEEEECCCCccEEEeC-----CcCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEE
Confidence 456789999999999987899996532 23222211 111223 35799999999999997 7999999999999
Q ss_pred ec
Q 020242 92 SA 93 (329)
Q Consensus 92 ~~ 93 (329)
..
T Consensus 94 ~~ 95 (124)
T 3ef4_A 94 GK 95 (124)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 37
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.38 E-value=4.1e-07 Score=71.45 Aligned_cols=80 Identities=23% Similarity=0.196 Sum_probs=53.7
Q ss_pred hhccCCCceeeCCEEEEEEcCC-CCcEEEeCcc---cccCCCCC--CCCcccCCCC-cEEEecccCceEEEcCCCCCCCC
Q 020242 11 DVFLCLFSFFFFTFSVFNFAAG-NHDVTRVTQS---SFNACNTT--SPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLG 83 (329)
Q Consensus 11 ~~Wa~~~tf~vGD~LvF~y~~~-~H~V~~V~~~---~y~~C~~~--~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~ 83 (329)
..=....++++||+|+|....+ .|+|+..+.. +.+.+... ........|. .+++++++|.|+|+|. .||+.
T Consensus 13 ~F~P~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~~~G~y~~~C~--~H~~~ 90 (99)
T 1plc_A 13 AFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCS--PHQGA 90 (99)
T ss_dssp CEESSEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECCSCEEEEEECG--GGTTT
T ss_pred eEeCCEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEECCCceEEEEcC--CCccc
Confidence 3334557999999999988754 7999765321 11111100 0001123343 5789999999999999 89999
Q ss_pred CCeEEEEee
Q 020242 84 GQKLAINVS 92 (329)
Q Consensus 84 GmKl~I~V~ 92 (329)
||+..|.|.
T Consensus 91 gM~G~i~V~ 99 (99)
T 1plc_A 91 GMVGKVTVN 99 (99)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999983
No 38
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.38 E-value=1.4e-07 Score=74.37 Aligned_cols=77 Identities=17% Similarity=0.067 Sum_probs=52.4
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCcc---cccCCCCCCCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQS---SFNACNTTSPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~---~y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
....++++||+|.|.+.. ..|+|+..+.. +++.+...........|. .+++++++|.|+|+|+. ||+.||+..
T Consensus 17 P~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~~G~y~y~C~~--H~~~gM~G~ 94 (98)
T 1iuz_A 17 PSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLSTPGVYGVYCEP--HAGAGMKMT 94 (98)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCSCEEEEEECTT--TGGGTCEEE
T ss_pred CCEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCCCEEEEEEchh--hccCCCEEE
Confidence 455789999999999875 38999654311 122111000001233444 47889999999999996 999999999
Q ss_pred EEee
Q 020242 89 INVS 92 (329)
Q Consensus 89 I~V~ 92 (329)
|.|.
T Consensus 95 I~V~ 98 (98)
T 1iuz_A 95 ITVQ 98 (98)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 39
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.35 E-value=5.8e-07 Score=71.24 Aligned_cols=72 Identities=18% Similarity=0.093 Sum_probs=51.1
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCcccccCCCCC----------CCCcccCCC-CcEEEe---cccCceEEEcCCC
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQSSFNACNTT----------SPLSRTTNS-PASVTL---TASGPHYFICSFP 78 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~~y~~C~~~----------~~~~~~~~G-~~~v~L---~~~G~~yFiCs~~ 78 (329)
...+++++||+|+|.+.. ..|+|+.... |... ........| ..+|++ +++|.|+|+|.
T Consensus 19 P~~i~v~~Gd~V~~~n~~~~~H~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEFLNNKVPPHNVVFDAA-----LNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEEEECSSSCCCBEECSS-----SSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEEEECCCCCceEEEeCC-----CCcccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 345689999999999764 4799975432 2211 001112333 356888 88999999999
Q ss_pred CCCCCCCeEEEEee
Q 020242 79 GHCLGGQKLAINVS 92 (329)
Q Consensus 79 ~HC~~GmKl~I~V~ 92 (329)
.||+.||+..|.|.
T Consensus 92 ~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 92 PHRGAGMVGKITVA 105 (106)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred ChhhcCcEEEEEEc
Confidence 89999999999985
No 40
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.34 E-value=1.1e-06 Score=68.73 Aligned_cols=76 Identities=25% Similarity=0.179 Sum_probs=51.7
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCccc---ccCCCCCCCCcccCCCCcEEEecccCceEEEcCCCCCCCCCCeEEE
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQSS---FNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAI 89 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~~---y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~GmKl~I 89 (329)
....++++||+|+|.+.. ..|+|+...... .+.+.. +..........+++++++|.|+|+|. .||..||+..|
T Consensus 18 P~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i 94 (97)
T 1b3i_A 18 PKALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSN-TKLAIAPGSFYSVTLGTPGTYSFYCT--PHRGAGMVGTI 94 (97)
T ss_dssp SSEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCB-CCCCCSCSCCEEEECCSCSEEEEECS--STTTTTCEEEE
T ss_pred CCEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccc-cceecCCCCEEEEEeCCCeEEEEEcc--ChhhcCCEEEE
Confidence 455789999999999764 379997653211 000101 11111122335788999999999999 89999999999
Q ss_pred Eee
Q 020242 90 NVS 92 (329)
Q Consensus 90 ~V~ 92 (329)
.|.
T Consensus 95 ~V~ 97 (97)
T 1b3i_A 95 TVE 97 (97)
T ss_dssp EEC
T ss_pred EEC
Confidence 883
No 41
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.23 E-value=1.3e-06 Score=68.37 Aligned_cols=77 Identities=21% Similarity=0.145 Sum_probs=52.2
Q ss_pred cCCCceeeCCEEEEEEcCC-CCcEEEeCcc---cccCCCCC--CCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCe
Q 020242 14 LCLFSFFFFTFSVFNFAAG-NHDVTRVTQS---SFNACNTT--SPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQK 86 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~-~H~V~~V~~~---~y~~C~~~--~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmK 86 (329)
...+++++||+|+|..... .|+|+..... +++.+... ........|. .+++++++|.|+|+|. .||+.||+
T Consensus 16 P~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~~~G~y~~~C~--~H~~~gM~ 93 (99)
T 1byp_A 16 PSDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCA--PHAGAGMV 93 (99)
T ss_dssp SSEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECG--GGTTTTCE
T ss_pred CCEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeCCCcEEEEEcC--CccccCCE
Confidence 4456899999999988753 7998764321 12211100 0001223343 5789999999999999 89999999
Q ss_pred EEEEee
Q 020242 87 LAINVS 92 (329)
Q Consensus 87 l~I~V~ 92 (329)
..|.|.
T Consensus 94 G~i~V~ 99 (99)
T 1byp_A 94 GKVTVN 99 (99)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999883
No 42
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.22 E-value=1e-06 Score=69.36 Aligned_cols=77 Identities=10% Similarity=0.094 Sum_probs=52.6
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCccccc----CCCCCCCC----cccCCC-CcEEEecccCceEEEcCCCCCCCC
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQSSFN----ACNTTSPL----SRTTNS-PASVTLTASGPHYFICSFPGHCLG 83 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~~y~----~C~~~~~~----~~~~~G-~~~v~L~~~G~~yFiCs~~~HC~~ 83 (329)
...+++++||+|+|.... ..|+|+......++ .|.....+ .....| ..+++++++|.|+|+|. .||..
T Consensus 16 P~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~y~C~--~H~~~ 93 (102)
T 1kdj_A 16 PDSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVSTPGTYTFYCT--PHKSA 93 (102)
T ss_dssp SSEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCSCEEEEEECS--TTGGG
T ss_pred CCEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEeCCCeEEEEEeC--CCccc
Confidence 345789999999999764 37999765333321 11110111 112334 35788899999999999 89999
Q ss_pred CCeEEEEee
Q 020242 84 GQKLAINVS 92 (329)
Q Consensus 84 GmKl~I~V~ 92 (329)
||+..|.|.
T Consensus 94 gM~G~i~V~ 102 (102)
T 1kdj_A 94 NMKGTLTVK 102 (102)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999883
No 43
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.09 E-value=1.2e-06 Score=68.35 Aligned_cols=77 Identities=22% Similarity=0.109 Sum_probs=51.5
Q ss_pred cCCCceeeCCEEEEEEcCC-CCcEEEeCcc---cccCCCCCCCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 14 LCLFSFFFFTFSVFNFAAG-NHDVTRVTQS---SFNACNTTSPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~-~H~V~~V~~~---~y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
....++++||+|+|....+ .|+|+..... +++.+...........|. .+++++++|.|+|+|. .||+.||+..
T Consensus 17 P~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~y~C~--~H~~~gM~G~ 94 (98)
T 2plt_A 17 PKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTAAGEYGYYCE--PHQGAGMVGK 94 (98)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCSCEEEEEECG--GGGGGTCEEE
T ss_pred CCEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCCCeEEEEEcC--CccccCCeEE
Confidence 4457899999999988753 7998654211 111110000001233344 4688999999999999 7999999999
Q ss_pred EEee
Q 020242 89 INVS 92 (329)
Q Consensus 89 I~V~ 92 (329)
|.|.
T Consensus 95 i~V~ 98 (98)
T 2plt_A 95 IIVQ 98 (98)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 44
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.01 E-value=6.8e-06 Score=64.17 Aligned_cols=77 Identities=12% Similarity=-0.000 Sum_probs=50.9
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCccc--ccCCCCCCCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCeEEE
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQSS--FNACNTTSPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQKLAI 89 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~~--y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmKl~I 89 (329)
....++++||+|+|.... ..|+|+..+... -+.............|. .+++++++|.|+|+|. .||..||+..|
T Consensus 18 P~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~~~C~--~H~~~gM~G~i 95 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEPGTYTYYCE--PHRGAGMVGKV 95 (98)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSCEEEEEECG--GGTTTTCEEEE
T ss_pred CCEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCCeEEEEEcC--CccccCCeEEE
Confidence 455789999999999764 479986543210 00000000001223343 4688899999999999 79999999999
Q ss_pred Eee
Q 020242 90 NVS 92 (329)
Q Consensus 90 ~V~ 92 (329)
.|.
T Consensus 96 ~V~ 98 (98)
T 1pcs_A 96 VVE 98 (98)
T ss_dssp EEC
T ss_pred EEC
Confidence 883
No 45
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.99 E-value=1.5e-05 Score=62.73 Aligned_cols=88 Identities=22% Similarity=0.222 Sum_probs=57.0
Q ss_pred EEEEecc-CCcccCCCCCcCcccccCCCeeeecCEEEEeeCC-CCceEEEEccccccCCCC-------CCCcccCCCC-C
Q 020242 164 THVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYDSCNS-------SSTISKSTNP-P 233 (329)
Q Consensus 164 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~h~V~~V~~~~y~~C~~-------~~~i~~~~~G-~ 233 (329)
++.||.+ .+..+.+ ...+++.||+|.|.... ..|+|..-... + .+.. .........| .
T Consensus 4 ~V~~~~~~~~~~f~p----------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~-~-~~~~g~~~~~~~~~~~~i~pG~~ 71 (105)
T 3cvb_A 4 TVKMGADSGLFQFEP----------ANVTVHPGDTVKWVNNKLPPHNILFDDKQ-V-PGASKELADKLSHSQLMFSPGES 71 (105)
T ss_dssp EEEESCTTCCSCEES----------SEEEECTTEEEEEEECSSCCEEEEECTTS-S-GGGCHHHHHHHCEEEEECSTTCE
T ss_pred EEEEeecCCccEEeC----------CEEEEcCCCEEEEEECCCCCCeEEEeCCC-C-CcccccccccccccccccCCCCe
Confidence 5667643 4555432 45789999999998754 47998864211 1 1100 0000112233 3
Q ss_pred cEEEe---CCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 234 TRITL---GTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 234 ~~v~L---~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
..+++ +++|.|+|.|. .|+..||+..|.|.
T Consensus 72 ~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 72 YEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 46677 78999999999 79999999999985
No 46
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.97 E-value=1.6e-05 Score=69.52 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=59.0
Q ss_pred CceEEEEeccCCcccCCCCCcCcccccCCCee-eecCEEEEeeC--CC------CceEEEEcccccc-------------
Q 020242 161 QPATHVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYP--AR------VHDVVEVTKAAYD------------- 218 (329)
Q Consensus 161 ~~~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~--~~------~h~V~~V~~~~y~------------- 218 (329)
...++.|+...++.+.+ +.+++ +.||.|.|.+. .. .|+++..+..+++
T Consensus 41 ~~~~V~I~~~d~m~F~P----------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~ 110 (167)
T 3ay2_A 41 GNCAATVESNDNMQFNT----------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTD 110 (167)
T ss_dssp -CCEEEEEECTTSCBSC----------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGT
T ss_pred CceEEEEEeCCCceEec----------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccc
Confidence 34567776555665532 45777 78997666653 33 2999877544322
Q ss_pred --CCCCCCCc---ccCCCCC-cEEEeC----CCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 219 --SCNSSSTI---SKSTNPP-TRITLG----TAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 219 --~C~~~~~i---~~~~~G~-~~v~L~----~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
.=+..+.+ ..+..|. ..|+++ ++|.|+|+|.+++|=+ |||..|.|.
T Consensus 111 ~v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 111 YVKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TSCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 11111111 1233443 356665 7999999999999999 999999985
No 47
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.94 E-value=1.9e-05 Score=65.29 Aligned_cols=70 Identities=19% Similarity=0.171 Sum_probs=51.0
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEEccccccCCCCCCC--cccCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSST--ISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~~--i~~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
...++++||+|.|.+....|+|..... +..... ...-......++++++|.|+|+|.. |+. |+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 568999999999999877899986431 111111 1111122467889999999999997 887 99999997
Q ss_pred C
Q 020242 266 G 266 (329)
Q Consensus 266 ~ 266 (329)
.
T Consensus 92 ~ 92 (122)
T 2ux6_A 92 D 92 (122)
T ss_dssp S
T ss_pred C
Confidence 6
No 48
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.92 E-value=4e-06 Score=66.19 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=46.4
Q ss_pred CCCeeeecCEEEEeeCC---CCceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCCCCCCCCCeEE
Q 020242 188 RNNNFSVGDILVFDYPA---RVHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFPGHCSAGQKLA 261 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~---~~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~HC~~GmKl~ 261 (329)
+.+++++||+|.|.+.+ ..|++..-. ...+ .....|. ..|+.+++|.|.|+|. .||..||+..
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~-~~~~--------~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~ 96 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKK-LGID--------VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGK 96 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGG-GTEE--------EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEec-CCcc--------eeecCCcceeEEEecccCceEEEECc--cccCCCCEEE
Confidence 56899999999998753 347776321 1111 1122232 3456679999999996 6999999999
Q ss_pred EEec
Q 020242 262 VNVT 265 (329)
Q Consensus 262 I~V~ 265 (329)
|.|.
T Consensus 97 i~Ve 100 (100)
T 4hci_A 97 VIVK 100 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 49
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.86 E-value=4.8e-05 Score=63.55 Aligned_cols=91 Identities=14% Similarity=0.233 Sum_probs=57.2
Q ss_pred EEEEeccCCcccCCCCCcCcccccCCCeeeec-CEEEEeeCC-C-------CceEEEEcccc----------------cc
Q 020242 164 THVVGGALGWTVPPNASVGYQNWARNNNFSVG-DILVFDYPA-R-------VHDVVEVTKAA----------------YD 218 (329)
Q Consensus 164 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vG-D~LvF~y~~-~-------~h~V~~V~~~~----------------y~ 218 (329)
++.|+...++.+.+ +..+++.| |.+.|.+.+ + .|+++..+..+ |.
T Consensus 4 ~v~i~~~d~m~F~p----------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v 73 (129)
T 1cuo_A 4 ETTVTSGDTMTYST----------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFV 73 (129)
T ss_dssp EEEEEECSSSCCSC----------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTS
T ss_pred EEEEEeCCCceEcc----------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccc
Confidence 45565554555432 56899999 977776643 2 39998875442 21
Q ss_pred CCCCCCCc---ccCCCCC---cEEEeC---CCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 219 SCNSSSTI---SKSTNPP---TRITLG---TAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 219 ~C~~~~~i---~~~~~G~---~~v~L~---~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
.=+..+.+ ..+..|. .+|++. ++|.|+|+|.+++|=+ |||..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 74 TPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 11111111 1233443 244443 8999999999999999 999999985
No 50
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.76 E-value=5.4e-06 Score=65.44 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=45.9
Q ss_pred cCCCceeeCCEEEEEEcCC---CCcEEEeCcccccCCCCCCCCcccCCCC---cEEEecccCceEEEcCCCCCCCCCCeE
Q 020242 14 LCLFSFFFFTFSVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSFPGHCLGGQKL 87 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~---~H~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~~~HC~~GmKl 87 (329)
.+..++++||+|.|.+.+. .|++.. .....+ .....|. ..++.+++|.|.|+|. .||..||+.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~~H~~~~-~~~~~~--------~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G 95 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKSEHTFTI-KKLGID--------VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEG 95 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSSCEEEEE-GGGTEE--------EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEE
T ss_pred CCEEEECCCCEEEEEEEcCCCceEEEEE-ecCCcc--------eeecCCcceeEEEecccCceEEEECc--cccCCCCEE
Confidence 3457899999999998643 366632 111111 1122333 2456689999999996 699999999
Q ss_pred EEEee
Q 020242 88 AINVS 92 (329)
Q Consensus 88 ~I~V~ 92 (329)
.|.|.
T Consensus 96 ~i~Ve 100 (100)
T 4hci_A 96 KVIVK 100 (100)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99884
No 51
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.75 E-value=3.9e-05 Score=61.06 Aligned_cols=67 Identities=21% Similarity=0.175 Sum_probs=47.9
Q ss_pred CCCeeeecCEEEEeeCCC-CceEEEEcccc----ccCCCCCCCcccCCCC-CcEEEeCCCCcEEEEcCCCCCCCCCCeEE
Q 020242 188 RNNNFSVGDILVFDYPAR-VHDVVEVTKAA----YDSCNSSSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLA 261 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-~h~V~~V~~~~----y~~C~~~~~i~~~~~G-~~~v~L~~~G~~YFic~~~~HC~~GmKl~ 261 (329)
..+++++||+|.|..... .|+|...+..+ |+.+ .+..| ...++++++|.|+|+|.. |. ||+..
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G~ 101 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLTFTEAGTYDYHCTP--HP--FMRGK 101 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 568999999999987654 79988543211 2221 12223 356788999999999987 54 99999
Q ss_pred EEec
Q 020242 262 VNVT 265 (329)
Q Consensus 262 I~V~ 265 (329)
|.|.
T Consensus 102 i~V~ 105 (105)
T 2ov0_A 102 VVVE 105 (105)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9884
No 52
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.69 E-value=7.7e-05 Score=59.59 Aligned_cols=67 Identities=22% Similarity=0.232 Sum_probs=48.3
Q ss_pred CCCeeeecCEEEEeeCCC-CceEEEEccc----cccCCCCCCCcccCCCC-CcEEEeCCCCcEEEEcCCCCCCCCCCeEE
Q 020242 188 RNNNFSVGDILVFDYPAR-VHDVVEVTKA----AYDSCNSSSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLA 261 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-~h~V~~V~~~----~y~~C~~~~~i~~~~~G-~~~v~L~~~G~~YFic~~~~HC~~GmKl~ 261 (329)
...++++||+|.|..... .|+|...+.. .|+. ..+..| ...++++++|.|.|+|.. |. ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 568999999999987654 6998754322 1211 112233 356888999999999997 87 99999
Q ss_pred EEec
Q 020242 262 VNVT 265 (329)
Q Consensus 262 I~V~ 265 (329)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 53
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.63 E-value=0.00016 Score=60.30 Aligned_cols=77 Identities=25% Similarity=0.382 Sum_probs=47.6
Q ss_pred CCCee-eecCEEEEeeCC--C------CceEEEEcccc----------------ccCCCCCCCc---ccCCCCC-cEEEe
Q 020242 188 RNNNF-SVGDILVFDYPA--R------VHDVVEVTKAA----------------YDSCNSSSTI---SKSTNPP-TRITL 238 (329)
Q Consensus 188 ~~~~f-~vGD~LvF~y~~--~------~h~V~~V~~~~----------------y~~C~~~~~i---~~~~~G~-~~v~L 238 (329)
+.+++ +.||++.|.+.+ . .|+++..+..+ |..=+..+.+ ..+..|. ..|++
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 44566 669977776643 2 39998765432 2211111111 1233443 34444
Q ss_pred --C--CCCc-EEEEcCCCCCCCCCCeEEEEec
Q 020242 239 --G--TAGE-HYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 239 --~--~~G~-~YFic~~~~HC~~GmKl~I~V~ 265 (329)
. ++|. |.|+|.+++|=+ |||..|.|.
T Consensus 97 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 97 DVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3 6785 999999999999 999999985
No 54
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.59 E-value=0.00014 Score=60.63 Aligned_cols=91 Identities=19% Similarity=0.279 Sum_probs=53.7
Q ss_pred EEEEeccCCcccCCCCCcCcccccCCCee-eecCEEEEeeCC--C------CceEEEEcccc----------------cc
Q 020242 164 THVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYPA--R------VHDVVEVTKAA----------------YD 218 (329)
Q Consensus 164 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~~--~------~h~V~~V~~~~----------------y~ 218 (329)
++.|+...+..+.+ +.+++ +.||.+.|.+.+ . .|+++..+..+ |.
T Consensus 4 ~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~ 73 (129)
T 2ccw_A 4 EATVESNDAMQYNV----------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYV 73 (129)
T ss_dssp EEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCccEec----------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccc
Confidence 45565554555422 34556 669976666643 2 39999775442 22
Q ss_pred CCCCCCCc---ccCCCCC-cEEE--eC--CCCc-EEEEcCCCCCCCCCCeEEEEec
Q 020242 219 SCNSSSTI---SKSTNPP-TRIT--LG--TAGE-HYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 219 ~C~~~~~i---~~~~~G~-~~v~--L~--~~G~-~YFic~~~~HC~~GmKl~I~V~ 265 (329)
.=+..+.+ ..+..|. ..|+ +. ++|. |+|+|.+++|=+ |||..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 74 KAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 11111111 1233343 2344 43 5665 999999999999 999999985
No 55
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.57 E-value=0.00015 Score=60.51 Aligned_cols=91 Identities=21% Similarity=0.287 Sum_probs=55.6
Q ss_pred EEEEeccCCcccCCCCCcCcccccCCCee-eecCEEEEeeCC--C------CceEEEEcccccc----------------
Q 020242 164 THVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYPA--R------VHDVVEVTKAAYD---------------- 218 (329)
Q Consensus 164 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~~--~------~h~V~~V~~~~y~---------------- 218 (329)
++.|+...++.+.+ +.+++ +.||+|.|.+.+ . .|+++..+..+.+
T Consensus 4 ~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~ 73 (128)
T 1nwp_A 4 KVTVDSTDQMSFNT----------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYL 73 (128)
T ss_dssp EEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTS
T ss_pred EEEEEeCCCccEec----------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccc
Confidence 45566555566533 45777 789987776643 2 2999876543221
Q ss_pred CCCCCCCc---ccCCCCC-cEEEeC----CCCc-EEEEcCCCCCCCCCCeEEEEec
Q 020242 219 SCNSSSTI---SKSTNPP-TRITLG----TAGE-HYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 219 ~C~~~~~i---~~~~~G~-~~v~L~----~~G~-~YFic~~~~HC~~GmKl~I~V~ 265 (329)
.=+..+.+ ..+..|. ..|+++ ++|. |+|+|.+++|=+ |||..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 74 KDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 11111111 1233443 345443 5676 999999999999 999999984
No 56
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.49 E-value=6.5e-05 Score=65.56 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=49.0
Q ss_pred CCce-eeCCEEEEEEcC-C-------CCcEEEeCcccccC---------------CCCCCC---CcccCCCC-cEEEec-
Q 020242 16 LFSF-FFFTFSVFNFAA-G-------NHDVTRVTQSSFNA---------------CNTTSP---LSRTTNSP-ASVTLT- 66 (329)
Q Consensus 16 ~~tf-~vGD~LvF~y~~-~-------~H~V~~V~~~~y~~---------------C~~~~~---~~~~~~G~-~~v~L~- 66 (329)
.+++ +.||+|.|.|.+ + .|+++..+..+++. =+..+- ......|. ..|+++
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~~ 138 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDP 138 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEECG
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEec
Confidence 3566 779988888853 2 29987765443220 000010 11233443 356665
Q ss_pred ---ccCceEEEcCCCCCCCCCCeEEEEee
Q 020242 67 ---ASGPHYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 67 ---~~G~~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
++|.|+|+|++++|=+ |||..|.|.
T Consensus 139 ~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 139 AKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp GGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 7899999999999988 999999985
No 57
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.49 E-value=0.00018 Score=59.35 Aligned_cols=72 Identities=17% Similarity=0.103 Sum_probs=51.0
Q ss_pred cCCCceeeCCEEEEEEcCCCCcEEEeCcccccCCCCCCC--CcccCCCCcEEEecccCceEEEcCCCCCCCCCCeEEEEe
Q 020242 14 LCLFSFFFFTFSVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 91 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~GmKl~I~V 91 (329)
....++++||+|.|.+....|+|+... .|..... ...-.....+++++++|.|+|+|+. |+. |+..|.|
T Consensus 20 P~~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V 90 (122)
T 2ux6_A 20 PASLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQV 90 (122)
T ss_dssp SSEEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEE
T ss_pred CCEEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEE
Confidence 455789999999999987789996543 1221111 1111122357899999999999997 777 9999999
Q ss_pred ecC
Q 020242 92 SAR 94 (329)
Q Consensus 92 ~~~ 94 (329)
...
T Consensus 91 ~~~ 93 (122)
T 2ux6_A 91 GDA 93 (122)
T ss_dssp SSS
T ss_pred eCC
Confidence 753
No 58
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.47 E-value=0.00043 Score=57.70 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=50.6
Q ss_pred cCCCceeeC-CEEEEEEcC-C-------CCcEEEeCccccc----------------CCCCCCCC---cccCCCC-cEEE
Q 020242 14 LCLFSFFFF-TFSVFNFAA-G-------NHDVTRVTQSSFN----------------ACNTTSPL---SRTTNSP-ASVT 64 (329)
Q Consensus 14 a~~~tf~vG-D~LvF~y~~-~-------~H~V~~V~~~~y~----------------~C~~~~~~---~~~~~G~-~~v~ 64 (329)
....+++.| |.+.|.|.+ + .|+++..+..+++ .=+..+-+ .....|. ..|+
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 344688999 988888864 3 3998776543221 00001111 1233443 3455
Q ss_pred ec-----ccCceEEEcCCCCCCCCCCeEEEEee
Q 020242 65 LT-----ASGPHYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 65 L~-----~~G~~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
++ ++|.|+|+|++++|=+ |||..|.|.
T Consensus 97 f~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 54 7899999999999988 899999985
No 59
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.46 E-value=5.3e-05 Score=66.72 Aligned_cols=80 Identities=20% Similarity=0.321 Sum_probs=53.2
Q ss_pred eeeecCEEEE---eeCC------CCceEEEEccccccCCCCCC-C--cccCC--CCCcEEEeC-------------CCC-
Q 020242 191 NFSVGDILVF---DYPA------RVHDVVEVTKAAYDSCNSSS-T--ISKST--NPPTRITLG-------------TAG- 242 (329)
Q Consensus 191 ~f~vGD~LvF---~y~~------~~h~V~~V~~~~y~~C~~~~-~--i~~~~--~G~~~v~L~-------------~~G- 242 (329)
..++||.|-| +|.. ..+.|++|++++|+.|+... . +..-+ .+...|++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 4567999988 4532 23789999999999999863 2 11111 233344331 356
Q ss_pred cEEEEcCCC-----------CCCCC-CCeEEEEecCCCCC
Q 020242 243 EHYFFCTFP-----------GHCSA-GQKLAVNVTGGSST 270 (329)
Q Consensus 243 ~~YFic~~~-----------~HC~~-GmKl~I~V~~~~~~ 270 (329)
.|||||+-. |+|.. +|||.|.|......
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~ 144 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASS 144 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC---
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCCC
Confidence 799999864 79994 99999999765543
No 60
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.42 E-value=0.00024 Score=56.63 Aligned_cols=67 Identities=13% Similarity=0.077 Sum_probs=46.8
Q ss_pred CCCceeeCCEEEEEEcCC-CCcEEEeCcc----cccCCCCCCCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 15 CLFSFFFFTFSVFNFAAG-NHDVTRVTQS----SFNACNTTSPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~-~H~V~~V~~~----~y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
...++++||+|.|..... .|+|+..+.. .|++ ..+..|. .+++++++|.|.|+|+. |. ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 446889999999986543 6998653321 0211 1123333 46888999999999997 76 99999
Q ss_pred EEee
Q 020242 89 INVS 92 (329)
Q Consensus 89 I~V~ 92 (329)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 61
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.39 E-value=0.00024 Score=59.17 Aligned_cols=67 Identities=22% Similarity=0.232 Sum_probs=48.4
Q ss_pred CCCeeeecCEEEEeeCCC-CceEEEEccc----cccCCCCCCCcccCCCC-CcEEEeCCCCcEEEEcCCCCCCCCCCeEE
Q 020242 188 RNNNFSVGDILVFDYPAR-VHDVVEVTKA----AYDSCNSSSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLA 261 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-~h~V~~V~~~----~y~~C~~~~~i~~~~~G-~~~v~L~~~G~~YFic~~~~HC~~GmKl~ 261 (329)
...++++||+|.|..... .|+|...+.. .|+. ..+..| ...++++++|.|+|+|.. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~s-------~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCcccccc-------cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 568999999999987654 6999865322 1211 112233 346788999999999997 76 99999
Q ss_pred EEec
Q 020242 262 VNVT 265 (329)
Q Consensus 262 I~V~ 265 (329)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 62
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.31 E-value=0.00025 Score=55.51 Aligned_cols=75 Identities=11% Similarity=0.031 Sum_probs=49.0
Q ss_pred cCCCceeeCCEEEEEEcC-CCCcEEEeCcccccCCCC-------CCCCcccCCCC-cEEEe---cccCceEEEcCCCCCC
Q 020242 14 LCLFSFFFFTFSVFNFAA-GNHDVTRVTQSSFNACNT-------TSPLSRTTNSP-ASVTL---TASGPHYFICSFPGHC 81 (329)
Q Consensus 14 a~~~tf~vGD~LvF~y~~-~~H~V~~V~~~~y~~C~~-------~~~~~~~~~G~-~~v~L---~~~G~~yFiCs~~~HC 81 (329)
....+++.||+|+|.... ..|+|..-.. .+. +.. .........|. .++++ +++|.++|+|. .|+
T Consensus 18 p~~i~v~~Gd~V~~~N~~~~~H~v~~~~~-~~~-~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~--~H~ 93 (105)
T 3cvb_A 18 PANVTVHPGDTVKWVNNKLPPHNILFDDK-QVP-GASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA--PHR 93 (105)
T ss_dssp SSEEEECTTEEEEEEECSSCCEEEEECTT-SSG-GGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--TTG
T ss_pred CCEEEEcCCCEEEEEECCCCCCeEEEeCC-CCC-cccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--Cch
Confidence 344688999999998653 4798865321 111 100 00001123333 46777 78999999999 799
Q ss_pred CCCCeEEEEee
Q 020242 82 LGGQKLAINVS 92 (329)
Q Consensus 82 ~~GmKl~I~V~ 92 (329)
..||+..|.|.
T Consensus 94 ~~GM~G~i~V~ 104 (105)
T 3cvb_A 94 GAGMVGKITVE 104 (105)
T ss_dssp GGTCEEEEEEC
T ss_pred hcCCEEEEEEc
Confidence 99999999985
No 63
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.30 E-value=0.00043 Score=54.91 Aligned_cols=67 Identities=15% Similarity=0.055 Sum_probs=46.3
Q ss_pred CCCceeeCCEEEEEEcCC-CCcEEEeCccc----ccCCCCCCCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 15 CLFSFFFFTFSVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~-~H~V~~V~~~~----y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
...++++||+|.|..... .|+|......+ |+++ ....|. .+++++++|.|+|+|.. |. ||+..
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G~ 101 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLTFTEAGTYDYHCTP--HP--FMRGK 101 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 346889999999986644 69986532211 2221 122333 46888999999999997 43 99999
Q ss_pred EEee
Q 020242 89 INVS 92 (329)
Q Consensus 89 I~V~ 92 (329)
|.|.
T Consensus 102 i~V~ 105 (105)
T 2ov0_A 102 VVVE 105 (105)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9873
No 64
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.20 E-value=0.00057 Score=56.80 Aligned_cols=67 Identities=13% Similarity=0.077 Sum_probs=46.9
Q ss_pred CCCceeeCCEEEEEEcCC-CCcEEEeCcc----cccCCCCCCCCcccCCCC-cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 15 CLFSFFFFTFSVFNFAAG-NHDVTRVTQS----SFNACNTTSPLSRTTNSP-ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~-~H~V~~V~~~----~y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
...++++||+|.|..... .|+|+..+.. .|++ .....|. .+++++++|.|+|+|+. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~s-------~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCcccccc-------cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 446889999999986543 6998654321 1221 1123333 46888999999999997 65 99999
Q ss_pred EEee
Q 020242 89 INVS 92 (329)
Q Consensus 89 I~V~ 92 (329)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 65
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.07 E-value=0.00051 Score=57.19 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=47.9
Q ss_pred CCCce-eeCCEEEEEEcCC--------CCcEEEeCccccc----------------CCCCCCCC---cccCCCC-cEEEe
Q 020242 15 CLFSF-FFFTFSVFNFAAG--------NHDVTRVTQSSFN----------------ACNTTSPL---SRTTNSP-ASVTL 65 (329)
Q Consensus 15 ~~~tf-~vGD~LvF~y~~~--------~H~V~~V~~~~y~----------------~C~~~~~~---~~~~~G~-~~v~L 65 (329)
...++ +.||+|.|.|.+. .|+++..+..+.+ .=+..+-+ .....|. ..|++
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 34566 7799988888643 2998765433221 00000001 1234444 35665
Q ss_pred c----ccCc-eEEEcCCCCCCCCCCeEEEEee
Q 020242 66 T----ASGP-HYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 66 ~----~~G~-~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
+ ++|. |+|+|++++|=+ |||..|.|.
T Consensus 98 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 98 DVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 4 4676 999999999988 999999883
No 66
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.07 E-value=0.0021 Score=53.50 Aligned_cols=75 Identities=24% Similarity=0.277 Sum_probs=46.8
Q ss_pred Cce-eeCCEEEEEEcCC--------CCcEEEeCccc----------------ccCCCCCCC---CcccCCCC-cEEEec-
Q 020242 17 FSF-FFFTFSVFNFAAG--------NHDVTRVTQSS----------------FNACNTTSP---LSRTTNSP-ASVTLT- 66 (329)
Q Consensus 17 ~tf-~vGD~LvF~y~~~--------~H~V~~V~~~~----------------y~~C~~~~~---~~~~~~G~-~~v~L~- 66 (329)
+++ +.||+|.|.|.+. .|+++..+..+ |..=+..+- ......|. ..|+++
T Consensus 19 i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf~~ 98 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTFDV 98 (128)
T ss_dssp EEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEEES
T ss_pred EEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEEec
Confidence 345 5599888888643 29987654332 211010110 11234444 356654
Q ss_pred ---ccCc-eEEEcCCCCCCCCCCeEEEEee
Q 020242 67 ---ASGP-HYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 67 ---~~G~-~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
++|. |.|+|++++|=+ |||..|.|.
T Consensus 99 ~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 99 SKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp SCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 6785 999999999988 999999985
No 67
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=96.99 E-value=0.0015 Score=54.35 Aligned_cols=75 Identities=19% Similarity=0.257 Sum_probs=46.0
Q ss_pred Cce-eeCCEEEEEEcCC--------CCcEEEeCccccc----------------CCCCCCCC---cccCCCC-cEEEec-
Q 020242 17 FSF-FFFTFSVFNFAAG--------NHDVTRVTQSSFN----------------ACNTTSPL---SRTTNSP-ASVTLT- 66 (329)
Q Consensus 17 ~tf-~vGD~LvF~y~~~--------~H~V~~V~~~~y~----------------~C~~~~~~---~~~~~G~-~~v~L~- 66 (329)
.++ +.||+|.|.|.+. .|+++..+..+++ .=+..+-+ .....|. ..|+++
T Consensus 20 i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf~~ 99 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTFDV 99 (129)
T ss_dssp EEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEEEG
T ss_pred EEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEEec
Confidence 344 5599888888643 2998776543221 10101101 1233443 345554
Q ss_pred ---ccCc-eEEEcCCCCCCCCCCeEEEEee
Q 020242 67 ---ASGP-HYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 67 ---~~G~-~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
++|. |+|+|++++|=+ |||..|.|.
T Consensus 100 ~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 100 SKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp GGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred cccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 4665 999999999988 999999985
No 68
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=96.71 E-value=0.00097 Score=58.69 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=51.8
Q ss_pred ceeeCCEEEEE---EcC------CCCcEEEeCcccccCCCCCC-CCccc--C--CCCcEEEec-------------ccC-
Q 020242 18 SFFFFTFSVFN---FAA------GNHDVTRVTQSSFNACNTTS-PLSRT--T--NSPASVTLT-------------ASG- 69 (329)
Q Consensus 18 tf~vGD~LvF~---y~~------~~H~V~~V~~~~y~~C~~~~-~~~~~--~--~G~~~v~L~-------------~~G- 69 (329)
.+++||.|-|- |.. ..+.|++|++++|+.|+... ....+ . .+...+++. +.|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34569999886 322 24789999999999998763 21111 1 223334432 245
Q ss_pred ceEEEcCCC-----------CCCC-CCCeEEEEeecCCC
Q 020242 70 PHYFICSFP-----------GHCL-GGQKLAINVSARGS 96 (329)
Q Consensus 70 ~~yFiCs~~-----------~HC~-~GmKl~I~V~~~~~ 96 (329)
.|||||+-. ++|. .+|||.|.|.....
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~ 143 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDAS 143 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC--
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCC
Confidence 789999874 7896 49999999976543
No 69
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=96.60 E-value=0.0078 Score=58.92 Aligned_cols=73 Identities=21% Similarity=0.199 Sum_probs=50.5
Q ss_pred CCCceeeCCEEEEEEcCC---CCcEEEeCcccccCCCCCCCCcccCCCC---cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 15 CLFSFFFFTFSVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~---~H~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
..++++.||+|+|++.+. .|++..-.......|. ...|. .+|++++.|++||.|.+.+|=..||+..
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~-------i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~ 127 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV-------NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGN 127 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB-------CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee-------cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEE
Confidence 357899999999999743 3776431222222232 22233 3466688999999999999988899999
Q ss_pred EEeecC
Q 020242 89 INVSAR 94 (329)
Q Consensus 89 I~V~~~ 94 (329)
|.|...
T Consensus 128 i~V~~~ 133 (447)
T 2dv6_A 128 IQVLPG 133 (447)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999754
No 70
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.47 E-value=0.0017 Score=51.68 Aligned_cols=67 Identities=13% Similarity=0.061 Sum_probs=44.5
Q ss_pred CCCeeeecCEEEEeeCC---CCceEEEEccccccCCCCCCCcccCCCCC-cE--EEeCCCCcEEEEcCCCCCCCC-CCeE
Q 020242 188 RNNNFSVGDILVFDYPA---RVHDVVEVTKAAYDSCNSSSTISKSTNPP-TR--ITLGTAGEHYFFCTFPGHCSA-GQKL 260 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~---~~h~V~~V~~~~y~~C~~~~~i~~~~~G~-~~--v~L~~~G~~YFic~~~~HC~~-GmKl 260 (329)
...+++.||.|.|.+.+ ..|++..-+. +. ......|. .. |+.+++|.|+|.|.. ||.. +|+.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~-~~--------~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g 106 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSIDAF-GV--------QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPG 106 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEEGGG-TE--------EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCE
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEEcCC-Cc--------eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEE
Confidence 45789999999997753 2588763221 11 11223343 23 444899999999988 7753 4999
Q ss_pred EEEec
Q 020242 261 AVNVT 265 (329)
Q Consensus 261 ~I~V~ 265 (329)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99985
No 71
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.33 E-value=0.0031 Score=53.39 Aligned_cols=77 Identities=19% Similarity=0.272 Sum_probs=49.8
Q ss_pred CeeeecCEEEE---eeCCC------CceEEEEccccccCCCCCC-CcccC----CCCCcEEEeC-------------CCC
Q 020242 190 NNFSVGDILVF---DYPAR------VHDVVEVTKAAYDSCNSSS-TISKS----TNPPTRITLG-------------TAG 242 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~~------~h~V~~V~~~~y~~C~~~~-~i~~~----~~G~~~v~L~-------------~~G 242 (329)
...++||.|-| +|..+ ...+++|++++|+.|+... ....+ -.+..++++. ++|
T Consensus 23 v~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g 102 (140)
T 2vsm_B 23 LYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKN 102 (140)
T ss_dssp ECCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTT
T ss_pred EEecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCC
Confidence 34567999987 44322 4678889999999998863 21111 1233333321 456
Q ss_pred -cEEEEcCCC-----------CCCC-CCCeEEEEecC
Q 020242 243 -EHYFFCTFP-----------GHCS-AGQKLAVNVTG 266 (329)
Q Consensus 243 -~~YFic~~~-----------~HC~-~GmKl~I~V~~ 266 (329)
.||||++-. |-|. ..|||.|.|..
T Consensus 103 ~~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 103 KDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred CceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 688898753 5788 58999999963
No 72
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.06 E-value=0.016 Score=48.35 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=46.4
Q ss_pred CCCeeeecCEEEEeeCC--CCceEEEEccccccCCCCCCCcccCCCC---CcEEEeCCCCcEEEEcCCCCCCC---CCCe
Q 020242 188 RNNNFSVGDILVFDYPA--RVHDVVEVTKAAYDSCNSSSTISKSTNP---PTRITLGTAGEHYFFCTFPGHCS---AGQK 259 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~--~~h~V~~V~~~~y~~C~~~~~i~~~~~G---~~~v~L~~~G~~YFic~~~~HC~---~GmK 259 (329)
+..++.+||.+.|...+ -.|++..-+ -+.+ .....| ...++++++|.|+|+|.. +|. .+|+
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~ip~-~~~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~ 128 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHVEG-TNIN--------VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 128 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEETT-SSCE--------EEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCE
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEecC-CCce--------eEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCE
Confidence 46899999999999854 347765311 1111 111223 346888999999999987 444 7899
Q ss_pred EEEEecC
Q 020242 260 LAVNVTG 266 (329)
Q Consensus 260 l~I~V~~ 266 (329)
+.|.|..
T Consensus 129 g~v~V~~ 135 (135)
T 2cua_A 129 GTIVVKE 135 (135)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999863
No 73
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.93 E-value=0.0093 Score=50.54 Aligned_cols=76 Identities=20% Similarity=0.220 Sum_probs=49.5
Q ss_pred CeeeecCEEEE---eeCC---------CCceEEEEccccccCCCCCC-CcccC----CCCCcEEEe------------C-
Q 020242 190 NNFSVGDILVF---DYPA---------RVHDVVEVTKAAYDSCNSSS-TISKS----TNPPTRITL------------G- 239 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~---------~~h~V~~V~~~~y~~C~~~~-~i~~~----~~G~~~v~L------------~- 239 (329)
..+++||.|-+ +|.. ....+++|++++|++|+... +...+ -.+..+|++ .
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 46788999977 4443 24578899999999998863 21111 112222221 0
Q ss_pred CCC-cEEEEcCC-----------CCCCC-CCCeEEEEec
Q 020242 240 TAG-EHYFFCTF-----------PGHCS-AGQKLAVNVT 265 (329)
Q Consensus 240 ~~G-~~YFic~~-----------~~HC~-~GmKl~I~V~ 265 (329)
++| .||||++- +|-|. +.|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 455 68899875 35788 4899999985
No 74
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=95.92 E-value=0.092 Score=49.41 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=30.6
Q ss_pred cEEEeCCCCcEEEEcCCCCCC-CCCCeEEEEecCCCC
Q 020242 234 TRITLGTAGEHYFFCTFPGHC-SAGQKLAVNVTGGSS 269 (329)
Q Consensus 234 ~~v~L~~~G~~YFic~~~~HC-~~GmKl~I~V~~~~~ 269 (329)
..|+.+.+|.++|.|....|+ ..||...|+|.....
T Consensus 285 vlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 285 ALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 356778899999999988898 899999999986543
No 75
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=95.84 E-value=0.012 Score=49.79 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=49.7
Q ss_pred CeeeecCEEEE---eeCC-------CCceEEEEccccccCCCCCCCcc-c------CC-CCCcEEEe-------------
Q 020242 190 NNFSVGDILVF---DYPA-------RVHDVVEVTKAAYDSCNSSSTIS-K------ST-NPPTRITL------------- 238 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~-------~~h~V~~V~~~~y~~C~~~~~i~-~------~~-~G~~~v~L------------- 238 (329)
+.+++||.|-+ +|.. ....+++|++++|++|+...... . +. .+..+|++
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 56889999977 4542 24577799999999998754221 1 11 13434332
Q ss_pred CCCC-cEEEEcCC-----CCCCCCCCeEEEEecCCC
Q 020242 239 GTAG-EHYFFCTF-----PGHCSAGQKLAVNVTGGS 268 (329)
Q Consensus 239 ~~~G-~~YFic~~-----~~HC~~GmKl~I~V~~~~ 268 (329)
=++| .||||++- ++-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 1466 68888764 3456 99999998754
No 76
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=95.74 E-value=0.013 Score=46.39 Aligned_cols=66 Identities=8% Similarity=-0.010 Sum_probs=43.1
Q ss_pred CCceeeCCEEEEEEcCC---CCcEEEeCcccccCCCCCCCCcccCCCC-cEEEe--cccCceEEEcCCCCCCC-CCCeEE
Q 020242 16 LFSFFFFTFSVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNSP-ASVTL--TASGPHYFICSFPGHCL-GGQKLA 88 (329)
Q Consensus 16 ~~tf~vGD~LvF~y~~~---~H~V~~V~~~~y~~C~~~~~~~~~~~G~-~~v~L--~~~G~~yFiCs~~~HC~-~GmKl~ 88 (329)
..+++.||.|.|.+.+. .|++.. ...+. ......|. ..+++ +++|.++|.|.. ||. .+|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i-~~~~~--------~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSI-DAFGV--------QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEE-GGGTE--------EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEE-cCCCc--------eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 36889999999988632 466642 21111 11233343 34444 899999999987 664 349999
Q ss_pred EEee
Q 020242 89 INVS 92 (329)
Q Consensus 89 I~V~ 92 (329)
|.|.
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9885
No 77
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=95.68 E-value=0.011 Score=52.06 Aligned_cols=77 Identities=19% Similarity=0.345 Sum_probs=48.5
Q ss_pred CeeeecCEEEE---eeCCC--------CceEEEEccccccCCCCCC-Ccc------cCC-CCCcEEEe------------
Q 020242 190 NNFSVGDILVF---DYPAR--------VHDVVEVTKAAYDSCNSSS-TIS------KST-NPPTRITL------------ 238 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~~--------~h~V~~V~~~~y~~C~~~~-~i~------~~~-~G~~~v~L------------ 238 (329)
+.+++||.|-+ +|..+ ...+++|++++|++|+... ... ... .|..+|++
T Consensus 50 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~Gl 129 (182)
T 3czu_B 50 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 129 (182)
T ss_dssp EEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCe
Confidence 56789999977 45432 3577899999999998764 111 111 23333322
Q ss_pred -CCCC-cEEEEcCC----CCCCCCCCeEEEEecCCCC
Q 020242 239 -GTAG-EHYFFCTF----PGHCSAGQKLAVNVTGGSS 269 (329)
Q Consensus 239 -~~~G-~~YFic~~----~~HC~~GmKl~I~V~~~~~ 269 (329)
=++| .||||++- +|.| |||.|.|.....
T Consensus 130 EF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 130 EFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp CCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred eEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 1456 68888863 5667 999999986554
No 78
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=95.60 E-value=0.021 Score=52.96 Aligned_cols=78 Identities=5% Similarity=0.018 Sum_probs=47.5
Q ss_pred CCCeeeecCEEEEeeCC-C----CceEEEEccccccCCCCC----CCc--cc--CCCCC---cEEEeCCCCcEEEEcCCC
Q 020242 188 RNNNFSVGDILVFDYPA-R----VHDVVEVTKAAYDSCNSS----STI--SK--STNPP---TRITLGTAGEHYFFCTFP 251 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~-~----~h~V~~V~~~~y~~C~~~----~~i--~~--~~~G~---~~v~L~~~G~~YFic~~~ 251 (329)
...+++.||++.|.+.+ + .|.+..- ...|+--... .+. .+ ...|. ..++.+.+|.+.|.|-+.
T Consensus 195 ~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlh-G~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~ 273 (288)
T 3gdc_A 195 FPVKVKQHELVRIHLINVLEYDPINSFHIH-GNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKT 273 (288)
T ss_dssp SCEEEETTCCEEEEEEECCCSSSEEEEEET-TCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSH
T ss_pred cccccCCCCEEEEEEEeCCCCCcceeEEEc-CCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecCh
Confidence 35789999999987753 2 1555431 1111100000 000 01 11222 345567899999999999
Q ss_pred CCCCCCCeEEEEecC
Q 020242 252 GHCSAGQKLAVNVTG 266 (329)
Q Consensus 252 ~HC~~GmKl~I~V~~ 266 (329)
.|=++||...|+|.+
T Consensus 274 ~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 274 EFAELGWMGFFEVSA 288 (288)
T ss_dssp HHHTTTCEEEEEEEC
T ss_pred HHHhcCCCEEEEEeC
Confidence 999999999999864
No 79
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=95.49 E-value=0.015 Score=50.94 Aligned_cols=77 Identities=22% Similarity=0.297 Sum_probs=50.7
Q ss_pred CeeeecCEEEE---eeCC-------CCceEEEEccccccCCCCCCCcc-------cC-CCCCcEEEe-------------
Q 020242 190 NNFSVGDILVF---DYPA-------RVHDVVEVTKAAYDSCNSSSTIS-------KS-TNPPTRITL------------- 238 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~-------~~h~V~~V~~~~y~~C~~~~~i~-------~~-~~G~~~v~L------------- 238 (329)
+.+++||.|-+ +|.. ....+++|++++|++|+...... .. ..|..+|++
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 56889999977 4542 24577799999999998754321 11 123444432
Q ss_pred CCCC-cEEEEcCCC-----CCCCCCCeEEEEecCCCC
Q 020242 239 GTAG-EHYFFCTFP-----GHCSAGQKLAVNVTGGSS 269 (329)
Q Consensus 239 ~~~G-~~YFic~~~-----~HC~~GmKl~I~V~~~~~ 269 (329)
=++| .||||++-. +-| |||.|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 1456 688887642 346 999999988664
No 80
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.20 E-value=0.074 Score=44.08 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=44.4
Q ss_pred CCCeeee-cCEEEEeeCC-C-------CceEEEEccc----------------cccCCCCCCCcc---cCCCCC-cEEEe
Q 020242 188 RNNNFSV-GDILVFDYPA-R-------VHDVVEVTKA----------------AYDSCNSSSTIS---KSTNPP-TRITL 238 (329)
Q Consensus 188 ~~~~f~v-GD~LvF~y~~-~-------~h~V~~V~~~----------------~y~~C~~~~~i~---~~~~G~-~~v~L 238 (329)
+.+++.. |++|.|.+.+ + .|+++..+.. +|-.=+..+.++ .+..|. ..|++
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf 97 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF 97 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEE
Confidence 4456654 9999888754 3 3999987422 222111112221 234443 34444
Q ss_pred C-----CCCcEEEEcCCCCCCCCCCeEEEEec
Q 020242 239 G-----TAGEHYFFCTFPGHCSAGQKLAVNVT 265 (329)
Q Consensus 239 ~-----~~G~~YFic~~~~HC~~GmKl~I~V~ 265 (329)
+ ++|.|-|+|. +|= |||..|.|.
T Consensus 98 ~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 98 DVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 4 6699999999 887 999999884
No 81
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=94.67 E-value=0.19 Score=47.17 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=46.6
Q ss_pred CceeeCCEEEEEEcCC-----CCcEEEeCcccccCCCCCCCCcccCCCC---cEEEecccCceEEEcCCCC-----CCCC
Q 020242 17 FSFFFFTFSVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSFPG-----HCLG 83 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~~~-----HC~~ 83 (329)
++++.||+|++++.+. -|.+..-...+.+.- ..+.....|. ..|+++..|++||-|-..+ |=..
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~ 142 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVS 142 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHT
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhC
Confidence 4778999999999754 255543211111100 0111233343 3577788999999998864 6678
Q ss_pred CCeEEEEeec
Q 020242 84 GQKLAINVSA 93 (329)
Q Consensus 84 GmKl~I~V~~ 93 (329)
||...+.|..
T Consensus 143 Gl~G~~iV~~ 152 (333)
T 1mzy_A 143 GMAGCIMVLP 152 (333)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 9999988864
No 82
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.20 E-value=0.3 Score=40.41 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=43.2
Q ss_pred Cceee-CCEEEEEEcCCC--------CcEEEeCcccccC----------------CCCCCCC---cccCCCC-cEEEec-
Q 020242 17 FSFFF-FTFSVFNFAAGN--------HDVTRVTQSSFNA----------------CNTTSPL---SRTTNSP-ASVTLT- 66 (329)
Q Consensus 17 ~tf~v-GD~LvF~y~~~~--------H~V~~V~~~~y~~----------------C~~~~~~---~~~~~G~-~~v~L~- 66 (329)
+++.. |++|.|.+.+.. |+++..+.++.+. =+..+-+ .....|. ..|+++
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf~~ 99 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDV 99 (125)
T ss_dssp EEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEEEG
T ss_pred EEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEEeC
Confidence 44543 999999997443 9988764332211 0001111 1234454 356655
Q ss_pred ----ccCceEEEcCCCCCCCCCCeEEEEee
Q 020242 67 ----ASGPHYFICSFPGHCLGGQKLAINVS 92 (329)
Q Consensus 67 ----~~G~~yFiCs~~~HC~~GmKl~I~V~ 92 (329)
+.|.|-|+|+ +|= |||..|.|.
T Consensus 100 ~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 100 SKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp GGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 4599999999 886 999999873
No 83
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=94.04 E-value=0.068 Score=44.52 Aligned_cols=67 Identities=18% Similarity=0.122 Sum_probs=44.5
Q ss_pred CCCceeeCCEEEEEEcCC--CCcEEEeCcccccCCCCCCCCcccCCCC---cEEEecccCceEEEcCC---CCCCCCCCe
Q 020242 15 CLFSFFFFTFSVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSF---PGHCLGGQK 86 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~--~H~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~---~~HC~~GmK 86 (329)
...++.+||.|.|...+. .|++.. ..-+.+ .....|. ..++++++|.|+|+|+. .+| .+|+
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~i-p~~~~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~ 128 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHV-EGTNIN--------VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH--QNMF 128 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEE-TTSSCE--------EEECBTBCEEEEEECCSCEEEEEECCSCCSTTS--TTCE
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEe-cCCCce--------eEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc--CCCE
Confidence 346899999999999642 365532 111110 1122342 46889999999999987 344 6899
Q ss_pred EEEEee
Q 020242 87 LAINVS 92 (329)
Q Consensus 87 l~I~V~ 92 (329)
+.|.|.
T Consensus 129 g~v~V~ 134 (135)
T 2cua_A 129 GTIVVK 134 (135)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999885
No 84
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=93.56 E-value=0.12 Score=44.51 Aligned_cols=76 Identities=21% Similarity=0.274 Sum_probs=47.3
Q ss_pred CeeeecCEEEE---eeCCC--------CceEEEEccccccCCCCCCCcc-c------C-CCCCcEEEe------------
Q 020242 190 NNFSVGDILVF---DYPAR--------VHDVVEVTKAAYDSCNSSSTIS-K------S-TNPPTRITL------------ 238 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~~--------~h~V~~V~~~~y~~C~~~~~i~-~------~-~~G~~~v~L------------ 238 (329)
+.+++||.|-+ +|..+ ...+++|++++|++|+...... . . ..|..+|++
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 56889999977 45321 2357799999999998765211 1 1 113333322
Q ss_pred -CCCC-cEEEEcCC-----CCCCCCCCeEEEEecCCC
Q 020242 239 -GTAG-EHYFFCTF-----PGHCSAGQKLAVNVTGGS 268 (329)
Q Consensus 239 -~~~G-~~YFic~~-----~~HC~~GmKl~I~V~~~~ 268 (329)
=++| .||||++- +|-| |||.|.|....
T Consensus 112 EF~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~ 145 (157)
T 2wo3_B 112 EFRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQ 145 (157)
T ss_dssp CCCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC
T ss_pred eeeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCC
Confidence 1455 68899874 3456 57888877654
No 85
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=93.36 E-value=0.049 Score=53.20 Aligned_cols=78 Identities=22% Similarity=0.327 Sum_probs=52.2
Q ss_pred CCCeeeecCEEEEeeCCC---CceEEEEccccccCCCCCCCcccCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEEEEe
Q 020242 188 RNNNFSVGDILVFDYPAR---VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNV 264 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~---~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~I~V 264 (329)
..++++.||+|+|++.+. .|++..-.......|.. ....+-...|+++++|++||.|...+|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~i----~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVN----GKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCBC----STTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCcccceec----CCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 568999999999888542 37765322222222321 11111123566788999999999989988899999999
Q ss_pred cCCCC
Q 020242 265 TGGSS 269 (329)
Q Consensus 265 ~~~~~ 269 (329)
.....
T Consensus 131 ~~~~~ 135 (447)
T 2dv6_A 131 LPGNR 135 (447)
T ss_dssp ESSCC
T ss_pred eCCcc
Confidence 87543
No 86
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=93.31 E-value=0.32 Score=44.64 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=53.8
Q ss_pred CcccCCCCCcCcccccCCCeeeecCEEEEeeCC---CCceEEEE------ccc-cccCCCCCCC-cc--cCCCCC---cE
Q 020242 172 GWTVPPNASVGYQNWARNNNFSVGDILVFDYPA---RVHDVVEV------TKA-AYDSCNSSST-IS--KSTNPP---TR 235 (329)
Q Consensus 172 GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~---~~h~V~~V------~~~-~y~~C~~~~~-i~--~~~~G~---~~ 235 (329)
+|.+.. ..|.. ....+++.||++.|.+.+ ..|.+..- ... .++.-..... .. ....|. ..
T Consensus 156 ~~~iNG---~~~~~-~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~ 231 (276)
T 3kw8_A 156 DMTINN---RKPHT-GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQ 231 (276)
T ss_dssp TTEETT---CCTTC-CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEE
T ss_pred ccccce---ecccC-CCCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEE
Confidence 587742 22321 245789999999887753 34555431 111 1111000000 00 111222 23
Q ss_pred EEeC---CCCcEEEEcCCCCCCCCCCeEEEEecCCCC
Q 020242 236 ITLG---TAGEHYFFCTFPGHCSAGQKLAVNVTGGSS 269 (329)
Q Consensus 236 v~L~---~~G~~YFic~~~~HC~~GmKl~I~V~~~~~ 269 (329)
++.+ .+|.++|-|-+..|=..||...+.|.....
T Consensus 232 ~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 232 IIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 4444 589999999999999999999999987654
No 87
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=92.87 E-value=0.083 Score=44.68 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=47.7
Q ss_pred ceeeCCEEEEE---EcC---------CCCcEEEeCcccccCCCCCC-CCccc----CCCCcE--------------EEec
Q 020242 18 SFFFFTFSVFN---FAA---------GNHDVTRVTQSSFNACNTTS-PLSRT----TNSPAS--------------VTLT 66 (329)
Q Consensus 18 tf~vGD~LvF~---y~~---------~~H~V~~V~~~~y~~C~~~~-~~~~~----~~G~~~--------------v~L~ 66 (329)
.+++||.|-+- |.. ....+++|++++|++|+... +...+ -.+..+ +.+.
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 67889999775 332 24568899999999998752 21111 112222 2333
Q ss_pred ccC-ceEEEcCCC-----------CCCC-CCCeEEEEee
Q 020242 67 ASG-PHYFICSFP-----------GHCL-GGQKLAINVS 92 (329)
Q Consensus 67 ~~G-~~yFiCs~~-----------~HC~-~GmKl~I~V~ 92 (329)
+| .||||++-. |-|. ..|||.|.|.
T Consensus 103 -pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 -SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp -TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred -CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 44 578888763 4685 4899999985
No 88
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=92.82 E-value=0.098 Score=44.08 Aligned_cols=75 Identities=20% Similarity=0.280 Sum_probs=46.7
Q ss_pred CceeeCCEEEEE---EcC-------CCCcEEEeCcccccCCCCCCCC-ccc------C-CCCcEEEe--cc---------
Q 020242 17 FSFFFFTFSVFN---FAA-------GNHDVTRVTQSSFNACNTTSPL-SRT------T-NSPASVTL--TA--------- 67 (329)
Q Consensus 17 ~tf~vGD~LvF~---y~~-------~~H~V~~V~~~~y~~C~~~~~~-~~~------~-~G~~~v~L--~~--------- 67 (329)
+.+++||.|-+- |.. ....+++|++++|++|+..... ..+ . .|..++++ .+
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 467889999775 331 2456889999999999875432 111 1 13333322 11
Q ss_pred --cC-ceEEEcCCC-----CCCCCCCeEEEEeecC
Q 020242 68 --SG-PHYFICSFP-----GHCLGGQKLAINVSAR 94 (329)
Q Consensus 68 --~G-~~yFiCs~~-----~HC~~GmKl~I~V~~~ 94 (329)
+| .||||++-. +-| |||.|.|...
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~ 134 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPT 134 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEcc
Confidence 56 577886542 345 9999999754
No 89
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=92.36 E-value=0.11 Score=45.55 Aligned_cols=77 Identities=21% Similarity=0.281 Sum_probs=47.8
Q ss_pred CceeeCCEEEEE---EcC-------CCCcEEEeCcccccCCCCCCCC-ccc-------CCCCcEEEe--c----------
Q 020242 17 FSFFFFTFSVFN---FAA-------GNHDVTRVTQSSFNACNTTSPL-SRT-------TNSPASVTL--T---------- 66 (329)
Q Consensus 17 ~tf~vGD~LvF~---y~~-------~~H~V~~V~~~~y~~C~~~~~~-~~~-------~~G~~~v~L--~---------- 66 (329)
+.+++||.|-+- |.. ....+++|++++|++|+..... ..+ ..|..++++ .
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 357889999775 431 2556889999999999875432 111 113333322 1
Q ss_pred -ccC-ceEEEcCCC-----CCCCCCCeEEEEeecCCC
Q 020242 67 -ASG-PHYFICSFP-----GHCLGGQKLAINVSARGS 96 (329)
Q Consensus 67 -~~G-~~yFiCs~~-----~HC~~GmKl~I~V~~~~~ 96 (329)
++| .||||++-. +-| |||.|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 156 577886542 235 999999986543
No 90
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=91.98 E-value=0.11 Score=45.79 Aligned_cols=76 Identities=16% Similarity=0.319 Sum_probs=45.6
Q ss_pred CceeeCCEEEEE---EcC--------CCCcEEEeCcccccCCCCCC-CCcc------cC-CCCcEEEe--c---------
Q 020242 17 FSFFFFTFSVFN---FAA--------GNHDVTRVTQSSFNACNTTS-PLSR------TT-NSPASVTL--T--------- 66 (329)
Q Consensus 17 ~tf~vGD~LvF~---y~~--------~~H~V~~V~~~~y~~C~~~~-~~~~------~~-~G~~~v~L--~--------- 66 (329)
+.+++||.|-+- |.. ....+++|++++|++|+... +... .. .|..+|++ .
T Consensus 50 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~Gl 129 (182)
T 3czu_B 50 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 129 (182)
T ss_dssp EEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCe
Confidence 356889999775 332 23568899999999998764 2111 11 12222221 1
Q ss_pred --ccC-ceEEEcCC----CCCCCCCCeEEEEeecCC
Q 020242 67 --ASG-PHYFICSF----PGHCLGGQKLAINVSARG 95 (329)
Q Consensus 67 --~~G-~~yFiCs~----~~HC~~GmKl~I~V~~~~ 95 (329)
++| .||||++- ++.| |||.|.|....
T Consensus 130 EF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~ 162 (182)
T 3czu_B 130 EFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKI 162 (182)
T ss_dssp CCCTTCEEEEEEEESSSCCCSC---CEEEEEECC--
T ss_pred eEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCC
Confidence 255 57788764 3455 99999997543
No 91
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=91.92 E-value=0.24 Score=41.77 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=48.0
Q ss_pred ceeeCCEEEEEEc---C------CCCcEEEeCcccccCCCCCC-CCccc----CCCCcEEEec-------------ccC-
Q 020242 18 SFFFFTFSVFNFA---A------GNHDVTRVTQSSFNACNTTS-PLSRT----TNSPASVTLT-------------ASG- 69 (329)
Q Consensus 18 tf~vGD~LvF~y~---~------~~H~V~~V~~~~y~~C~~~~-~~~~~----~~G~~~v~L~-------------~~G- 69 (329)
..++||.|-|-=. . ....++.|++++|+.|+... ....+ -.+...+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 3467999987632 1 14678889999999998763 22111 1233333332 355
Q ss_pred ceEEEcCCC-----------CCCC-CCCeEEEEeec
Q 020242 70 PHYFICSFP-----------GHCL-GGQKLAINVSA 93 (329)
Q Consensus 70 ~~yFiCs~~-----------~HC~-~GmKl~I~V~~ 93 (329)
.||||++-. |-|. ..|||.|.|..
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 577887753 4685 58999999963
No 92
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=91.79 E-value=0.51 Score=40.84 Aligned_cols=70 Identities=16% Similarity=0.137 Sum_probs=46.2
Q ss_pred CCCeeeecCEEEEeeCCC--CceEEEEccccccCCCCCCCcccCCCC---CcEEEeCCCCcEEEEcCC-CCCCCCCCeEE
Q 020242 188 RNNNFSVGDILVFDYPAR--VHDVVEVTKAAYDSCNSSSTISKSTNP---PTRITLGTAGEHYFFCTF-PGHCSAGQKLA 261 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~~i~~~~~G---~~~v~L~~~G~~YFic~~-~~HC~~GmKl~ 261 (329)
+...+.+|+.+.|...+. .|+...-+ +. .......| ...++.+++|.||++|.. -|+--.+|++.
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP~---lg------ik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~ 163 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVEG---TN------INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGT 163 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEETT---SS------CEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEECC---CC------eEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEE
Confidence 568999999999987643 46665311 10 01111223 246788999999999996 23334569999
Q ss_pred EEecC
Q 020242 262 VNVTG 266 (329)
Q Consensus 262 I~V~~ 266 (329)
|.|.+
T Consensus 164 V~V~e 168 (168)
T 3s8f_B 164 IVVKE 168 (168)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99863
No 93
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=90.71 E-value=0.18 Score=51.90 Aligned_cols=69 Identities=10% Similarity=0.104 Sum_probs=46.8
Q ss_pred CCCeeeecCEEEEeeCCC------CceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCC---CCCCC
Q 020242 188 RNNNFSVGDILVFDYPAR------VHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTF---PGHCS 255 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~------~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~---~~HC~ 255 (329)
...++++||.|.|.+.+. .|++..-+ ...+ .....|. ..|+++++|.|||.|.. ..|
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv~--------~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H-- 581 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGVA--------MEIGPQMTSSVTFVAANPGVYWYYCQWFCHALH-- 581 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE--------EEECTTCEEEEEEECCSCEEEEEECCSCCSTTC--
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCcc--------eeeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--
Confidence 457899999999987542 47776322 1111 1122232 46788999999999984 355
Q ss_pred CCCeEEEEecCC
Q 020242 256 AGQKLAVNVTGG 267 (329)
Q Consensus 256 ~GmKl~I~V~~~ 267 (329)
.||+..|.|...
T Consensus 582 ~gM~G~IiV~p~ 593 (595)
T 1fwx_A 582 MEMRGRMLVEPK 593 (595)
T ss_dssp TTCEEEEEEECC
T ss_pred cCCEEEEEEEcC
Confidence 499999999754
No 94
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.22 E-value=0.29 Score=50.31 Aligned_cols=68 Identities=16% Similarity=0.287 Sum_probs=46.7
Q ss_pred CCCeeeecCEEEEeeCC------CCceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCCCCCCCC-
Q 020242 188 RNNNFSVGDILVFDYPA------RVHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFPGHCSAG- 257 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~------~~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~HC~~G- 257 (329)
...++.+||.|.|...+ -.|++..-+. ..+ .....|. ..|+.+++|.|||+|.. +|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl-GIK--------~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~H 626 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH-GVS--------MEISPQQTSSITFVADKPGLHWYYCSW--FCHALH 626 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTT-TEE--------EEECTTCEEEEEEECCSCEEEEEECCS--CCSTTC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCC-Cce--------eeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCc
Confidence 56889999999998754 2577764221 100 1122332 46778999999999998 66654
Q ss_pred --CeEEEEecC
Q 020242 258 --QKLAVNVTG 266 (329)
Q Consensus 258 --mKl~I~V~~ 266 (329)
|+..|.|..
T Consensus 627 s~M~G~ViVEP 637 (638)
T 3sbq_A 627 MEMVGRMMVEP 637 (638)
T ss_dssp TTCEEEEEEEC
T ss_pred ccceEEEEEec
Confidence 999999864
No 95
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=89.62 E-value=0.4 Score=40.06 Aligned_cols=76 Identities=17% Similarity=0.242 Sum_probs=46.1
Q ss_pred CeeeecCEEEE---eeCCC--------CceEEEEccccccCCCCCC-Ccc------cCC-CCCcEEEe------------
Q 020242 190 NNFSVGDILVF---DYPAR--------VHDVVEVTKAAYDSCNSSS-TIS------KST-NPPTRITL------------ 238 (329)
Q Consensus 190 ~~f~vGD~LvF---~y~~~--------~h~V~~V~~~~y~~C~~~~-~i~------~~~-~G~~~v~L------------ 238 (329)
..+++||.|-+ .|+.+ ...+.+|++++|++|+... ... ... .|..+|++
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~ 101 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 101 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCe
Confidence 56789999977 55432 3567799999999999765 211 112 24444332
Q ss_pred -CCCC-cEEEEcCCCCCCC-CCCeEEEEec
Q 020242 239 -GTAG-EHYFFCTFPGHCS-AGQKLAVNVT 265 (329)
Q Consensus 239 -~~~G-~~YFic~~~~HC~-~GmKl~I~V~ 265 (329)
=++| .||||++-..|=. .=+||.|.|.
T Consensus 102 EF~pG~~YY~ISt~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 102 EFKEGHSYYYISKPIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCTTCEEEEEEEESSCCCCSCCEEEEEEC
T ss_pred eecCCCcEEEEEccCCCCCCcceEEEEEEE
Confidence 1456 6888887432222 1278888774
No 96
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.50 E-value=0.17 Score=51.97 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=44.3
Q ss_pred CceeeCCEEEEEEcCC------CCcEEEeCcccccCCCCCCCCcccCCCC---cEEEecccCceEEEcCC---CCCCCCC
Q 020242 17 FSFFFFTFSVFNFAAG------NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSF---PGHCLGG 84 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~------~H~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~---~~HC~~G 84 (329)
.++.+||.|.|.+.+. .|++..-+ .+.+ .....|. ..|+++++|.|||+|.. ..| .|
T Consensus 515 I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv~--------~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~g 583 (595)
T 1fwx_A 515 FTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGVA--------MEIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--ME 583 (595)
T ss_dssp EEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE--------EEECTTCEEEEEEECCSCEEEEEECCSCCSTTC--TT
T ss_pred EEEECCCEEEEEEEeCCCCCCceeeEEecC-CCcc--------eeeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--cC
Confidence 4778899999998652 46664311 1111 1123343 36788999999999984 355 49
Q ss_pred CeEEEEeecC
Q 020242 85 QKLAINVSAR 94 (329)
Q Consensus 85 mKl~I~V~~~ 94 (329)
|+..|.|...
T Consensus 584 M~G~IiV~p~ 593 (595)
T 1fwx_A 584 MRGRMLVEPK 593 (595)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEEEcC
Confidence 9999999743
No 97
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=89.12 E-value=5.6 Score=36.90 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=28.2
Q ss_pred CCCcEEEEcCCCCCCCCCCeEEEEecCCCCCC
Q 020242 240 TAGEHYFFCTFPGHCSAGQKLAVNVTGGSSTA 271 (329)
Q Consensus 240 ~~G~~YFic~~~~HC~~GmKl~I~V~~~~~~~ 271 (329)
.+|.+.|-|-+..|=.+||...++|.......
T Consensus 245 nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 245 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred CCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 58999999999999999999999998877643
No 98
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=88.94 E-value=0.55 Score=40.29 Aligned_cols=35 Identities=9% Similarity=0.138 Sum_probs=25.8
Q ss_pred CceeeCCEEEEE---EcC--------CCCcEEEeCcccccCCCCCC
Q 020242 17 FSFFFFTFSVFN---FAA--------GNHDVTRVTQSSFNACNTTS 51 (329)
Q Consensus 17 ~tf~vGD~LvF~---y~~--------~~H~V~~V~~~~y~~C~~~~ 51 (329)
+.+++||.|-+- |.. ....+++|++++|++|+...
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 77 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQ 77 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTT
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCC
Confidence 357789999776 321 23448899999999998755
No 99
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=88.91 E-value=0.81 Score=43.43 Aligned_cols=82 Identities=15% Similarity=0.102 Sum_probs=49.5
Q ss_pred CCCeeeecCEEEEeeCC---CCceEEEEccccccCCC---CCCCc------c--cCCCCC-c--EEEe---CCCCcEEEE
Q 020242 188 RNNNFSVGDILVFDYPA---RVHDVVEVTKAAYDSCN---SSSTI------S--KSTNPP-T--RITL---GTAGEHYFF 247 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~---~~h~V~~V~~~~y~~C~---~~~~i------~--~~~~G~-~--~v~L---~~~G~~YFi 247 (329)
...+++.||++.|.+.+ ..|.+..-. ..|+--. ...+. . ....|. . .|+. +.+|.++|-
T Consensus 209 ~~l~v~~Ge~vri~l~N~g~~~HpfHlHG-h~f~v~~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 209 PDFEATVGDRVEIVMITHGEYYHTFHMHG-HRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp CCEEEETTCEEEEEEEEESSCCEEEEETT-CCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred ccEEeCCCCEEEEEEEcCCccccccEecC-cEEEEeccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 34789999999887743 346554311 1111100 00000 0 112232 2 3442 579999999
Q ss_pred cCCCCCCCCCCeEEEEecCCCCC
Q 020242 248 CTFPGHCSAGQKLAVNVTGGSST 270 (329)
Q Consensus 248 c~~~~HC~~GmKl~I~V~~~~~~ 270 (329)
|-+..|=..||...+.|......
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCHHHHhccCcEEEEEecCCCC
Confidence 99999999999999999876543
No 100
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.19 E-value=0.43 Score=49.14 Aligned_cols=67 Identities=13% Similarity=0.173 Sum_probs=44.5
Q ss_pred CCCceeeCCEEEEEEcCC------CCcEEEeCcccccCCCCCCCC-cccCCCC---cEEEecccCceEEEcCCCCCCCC-
Q 020242 15 CLFSFFFFTFSVFNFAAG------NHDVTRVTQSSFNACNTTSPL-SRTTNSP---ASVTLTASGPHYFICSFPGHCLG- 83 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~------~H~V~~V~~~~y~~C~~~~~~-~~~~~G~---~~v~L~~~G~~yFiCs~~~HC~~- 83 (329)
...++.+||.|.|...+. .|++..-. + .+ .....|. ..++.+++|.|||+|+. +|..
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPs---l-------GIK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~ 625 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVN---H-------GVSMEISPQQTSSITFVADKPGLHWYYCSW--FCHAL 625 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETT---T-------TEEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTT
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecC---C-------CceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCC
Confidence 345789999999988752 46653311 1 11 1123343 35778999999999997 5654
Q ss_pred --CCeEEEEeec
Q 020242 84 --GQKLAINVSA 93 (329)
Q Consensus 84 --GmKl~I~V~~ 93 (329)
+|+..|.|..
T Consensus 626 Hs~M~G~ViVEP 637 (638)
T 3sbq_A 626 HMEMVGRMMVEP 637 (638)
T ss_dssp CTTCEEEEEEEC
T ss_pred cccceEEEEEec
Confidence 4999999863
No 101
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=85.20 E-value=14 Score=33.96 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=27.9
Q ss_pred CCCCcEEEEcCCCCCCCCCCeEEEEecCCCCC
Q 020242 239 GTAGEHYFFCTFPGHCSAGQKLAVNVTGGSST 270 (329)
Q Consensus 239 ~~~G~~YFic~~~~HC~~GmKl~I~V~~~~~~ 270 (329)
+.+|.+.|-|-+..|=.+||...+.|......
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~ 291 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADGT 291 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCCC
Confidence 35899999999999999999999999876653
No 102
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=82.84 E-value=1.8 Score=37.34 Aligned_cols=68 Identities=15% Similarity=0.038 Sum_probs=43.8
Q ss_pred CCCceeeCCEEEEEEcCC--CCcEEEeCcccccCCCCCCCCc-ccCCCC---cEEEecccCceEEEcCC-CCCCCCCCeE
Q 020242 15 CLFSFFFFTFSVFNFAAG--NHDVTRVTQSSFNACNTTSPLS-RTTNSP---ASVTLTASGPHYFICSF-PGHCLGGQKL 87 (329)
Q Consensus 15 ~~~tf~vGD~LvF~y~~~--~H~V~~V~~~~y~~C~~~~~~~-~~~~G~---~~v~L~~~G~~yFiCs~-~~HC~~GmKl 87 (329)
....+.+|+.+.|...+. .|+... . ++ .+. ....|. ..++.+++|.||++|+. -|+--.+|++
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~I-P--~l-------gik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g 162 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHV-E--GT-------NINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFG 162 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEE-T--TS-------SCEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEE-C--CC-------CeEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEE
Confidence 446899999999998753 344322 1 11 111 112343 35788999999999996 2333356999
Q ss_pred EEEee
Q 020242 88 AINVS 92 (329)
Q Consensus 88 ~I~V~ 92 (329)
.|.|.
T Consensus 163 ~V~V~ 167 (168)
T 3s8f_B 163 TIVVK 167 (168)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99985
No 103
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=80.26 E-value=1.1 Score=41.92 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=49.1
Q ss_pred CCCeeeecCEEEEeeCCC-----CceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCCC-----CC
Q 020242 188 RNNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFPG-----HC 254 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~-----HC 254 (329)
..++++.||.|++++.+. .|.+..-.....+.- ..+.....|. ..|+++++|++||-|...+ |=
T Consensus 64 P~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~ 140 (333)
T 1mzy_A 64 PLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHV 140 (333)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHH
T ss_pred CcEEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhh
Confidence 346889999999988653 366653211111100 0111233332 3577789999999998864 66
Q ss_pred CCCCeEEEEecCCC
Q 020242 255 SAGQKLAVNVTGGS 268 (329)
Q Consensus 255 ~~GmKl~I~V~~~~ 268 (329)
..||...|.|....
T Consensus 141 ~~Gl~G~~iV~~~~ 154 (333)
T 1mzy_A 141 VSGMAGCIMVLPRD 154 (333)
T ss_dssp HTTCEEEEEEECTT
T ss_pred hCCCEEEEEEccCc
Confidence 78999999997543
No 104
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=79.82 E-value=1.2 Score=41.78 Aligned_cols=77 Identities=14% Similarity=0.166 Sum_probs=48.3
Q ss_pred CCeeeecCEEEEeeCCC-----CceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCCC----CCCC
Q 020242 189 NNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFPG----HCSA 256 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~----HC~~ 256 (329)
.++++.||.|++++.+. .|.+..-.....+ ....+.....|. ..|+++.+|++||-|...+ |=..
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~---~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 142 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL---GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCC---CCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhC
Confidence 46889999999888643 4665532110000 001111233342 3567789999999998754 4568
Q ss_pred CCeEEEEecCCC
Q 020242 257 GQKLAVNVTGGS 268 (329)
Q Consensus 257 GmKl~I~V~~~~ 268 (329)
||...|.|....
T Consensus 143 Gl~G~liV~~~~ 154 (336)
T 1oe1_A 143 GMSGTLMVLPRD 154 (336)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEecCc
Confidence 999999998644
No 105
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=74.79 E-value=1.4 Score=41.23 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=47.0
Q ss_pred CCCeeeecCEEEEeeCCC-----CceEEE--EccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCC---CCC
Q 020242 188 RNNNFSVGDILVFDYPAR-----VHDVVE--VTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFP---GHC 254 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-----~h~V~~--V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~---~HC 254 (329)
..++++.||+|++++.+. .|++.. +.+. |. .. .......|. ..|+++.+|++||-|... .|-
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~--dG-~~--~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~ 144 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQ--GG-GA--AATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHI 144 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSG--GG-GT--TTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHH
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccccC--CC-CC--cceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhh
Confidence 347899999999987543 355543 1111 10 00 001123332 356778999999999763 355
Q ss_pred CCCCeEEEEecCCC
Q 020242 255 SAGQKLAVNVTGGS 268 (329)
Q Consensus 255 ~~GmKl~I~V~~~~ 268 (329)
..||...|.|....
T Consensus 145 ~~Gl~G~~iV~~~~ 158 (327)
T 1kbv_A 145 ANGMYGLILVEPKE 158 (327)
T ss_dssp HTTCEEEEEEECTT
T ss_pred hcceEEEEEEecCC
Confidence 68999999998643
No 106
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=70.15 E-value=1.7 Score=42.24 Aligned_cols=78 Identities=13% Similarity=0.077 Sum_probs=46.9
Q ss_pred CCCeeeecCEEEEeeCCC-----CceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCC---CCCCCC
Q 020242 188 RNNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTF---PGHCSA 256 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~---~~HC~~ 256 (329)
..++++.||+|++.+.+. .|++..=--...|. .........|. ..|+++.+|++||-|.. ..|=..
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG---~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 136 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG---GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIAN 136 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG---GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC---CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhC
Confidence 456889999999987643 45554310000110 00001123333 35677899999999953 356668
Q ss_pred CCeEEEEecCCC
Q 020242 257 GQKLAVNVTGGS 268 (329)
Q Consensus 257 GmKl~I~V~~~~ 268 (329)
||...|.|....
T Consensus 137 Gl~G~~iv~~~~ 148 (442)
T 2zoo_A 137 GMYGLILVEPKE 148 (442)
T ss_dssp TCEEEEEEECTT
T ss_pred ccEEEEEEeCCC
Confidence 999999998543
No 107
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=67.69 E-value=3.2 Score=38.79 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=28.9
Q ss_pred cEEEeCCCCcEEEEcCCCCCC-CCCCeEEEEecCCC
Q 020242 234 TRITLGTAGEHYFFCTFPGHC-SAGQKLAVNVTGGS 268 (329)
Q Consensus 234 ~~v~L~~~G~~YFic~~~~HC-~~GmKl~I~V~~~~ 268 (329)
..|+.+.+|.++|.|....|| ..||...|.|....
T Consensus 274 v~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 274 VEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 356778899999999999998 78998888887543
No 108
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=67.45 E-value=3.3 Score=38.66 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=48.0
Q ss_pred CCeeeecCEEEEeeCCC-----CceEEEEccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCCC----CCCC
Q 020242 189 NNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFPG----HCSA 256 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~----HC~~ 256 (329)
.++++.||.|++++.+. .|.+..-.....+ ....+.....|. ..|+++++|++||-|...+ |=..
T Consensus 72 ~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~---~~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~ 148 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPDTNTLLHNIDFHAATGAL---GGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTS 148 (340)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred cEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC---CCccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhC
Confidence 46789999999988653 3655431110000 001111233332 3577789999999998764 5568
Q ss_pred CCeEEEEecCCC
Q 020242 257 GQKLAVNVTGGS 268 (329)
Q Consensus 257 GmKl~I~V~~~~ 268 (329)
||...|.|....
T Consensus 149 Gl~G~~iV~~~~ 160 (340)
T 2bw4_A 149 GMNGAIMVLPRD 160 (340)
T ss_dssp TCEEEEEEECTB
T ss_pred cCEEEEEEccCc
Confidence 999999987643
No 109
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=63.01 E-value=4.5 Score=33.60 Aligned_cols=35 Identities=9% Similarity=0.164 Sum_probs=25.7
Q ss_pred CceeeCCEEEEE---EcC--------CCCcEEEeCcccccCCCCCC
Q 020242 17 FSFFFFTFSVFN---FAA--------GNHDVTRVTQSSFNACNTTS 51 (329)
Q Consensus 17 ~tf~vGD~LvF~---y~~--------~~H~V~~V~~~~y~~C~~~~ 51 (329)
..+++||.|-+- |.. ....++.|++++|++|+...
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 356889999764 322 23568899999999998765
No 110
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=61.97 E-value=3.2 Score=40.24 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=29.2
Q ss_pred EEEeCCCCcEEEEcCCCCCC-CCCCeEEEEecCCCC
Q 020242 235 RITLGTAGEHYFFCTFPGHC-SAGQKLAVNVTGGSS 269 (329)
Q Consensus 235 ~v~L~~~G~~YFic~~~~HC-~~GmKl~I~V~~~~~ 269 (329)
.|+++++|.++|.|....|+ ..||...|.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 56788899999999998887 789988888876553
No 111
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=60.61 E-value=6.1 Score=36.14 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=47.2
Q ss_pred CCeeeecCEEEEeeCCC---CceEEE--EccccccCCCCCCCcccCCCCC---cEEEeCCCCcEEEEcCCC---CCCCCC
Q 020242 189 NNNFSVGDILVFDYPAR---VHDVVE--VTKAAYDSCNSSSTISKSTNPP---TRITLGTAGEHYFFCTFP---GHCSAG 257 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~---~h~V~~--V~~~~y~~C~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~---~HC~~G 257 (329)
.++++.||.|++.+.+. .|++.. +.....|.-.... ......|. ..|+++.+|++||-|... .|=..|
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~-~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 145 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIG-AGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKG 145 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTST-TCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCcc-ceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCc
Confidence 47889999999988543 344432 1111111000000 01122232 357788999999999876 355689
Q ss_pred CeEEEEecCCC
Q 020242 258 QKLAVNVTGGS 268 (329)
Q Consensus 258 mKl~I~V~~~~ 268 (329)
|...|.|....
T Consensus 146 l~G~liV~~~~ 156 (288)
T 3gdc_A 146 LYGGFIVEPKE 156 (288)
T ss_dssp CEEEEEEECSS
T ss_pred CeEEEEEeCCc
Confidence 99999997654
No 112
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=59.49 E-value=5.7 Score=30.42 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=13.5
Q ss_pred CCceeeCCEEEEE-EcCCC
Q 020242 16 LFSFFFFTFSVFN-FAAGN 33 (329)
Q Consensus 16 ~~tf~vGD~LvF~-y~~~~ 33 (329)
++.|++||.|+|. |..+.
T Consensus 35 Dr~~~vGD~l~l~E~~~g~ 53 (83)
T 3iuw_A 35 DRNFQVGDILILEEYMNGM 53 (83)
T ss_dssp CSCCCTTCEEEEEEEETTE
T ss_pred ccCCCCCCEEEEEEccCCC
Confidence 3569999999995 65443
No 113
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=58.61 E-value=5.3 Score=37.22 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=46.1
Q ss_pred CceeeCCEEEEEEcCC-----CCcEEEeCcccccCCCCCCCCcccCCCC---cEEEecccCceEEEcCCCC----CCCCC
Q 020242 17 FSFFFFTFSVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSFPG----HCLGG 84 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~~~----HC~~G 84 (329)
++++.||+|++++.+. -|.+..-.....+. ..+......|. ..|+++..|++||.|...+ |=..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~---~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGALG---GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCC---CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 4778999999999754 35553211110000 01111123333 3577788999999998764 56689
Q ss_pred CeEEEEeecC
Q 020242 85 QKLAINVSAR 94 (329)
Q Consensus 85 mKl~I~V~~~ 94 (329)
|...|.|...
T Consensus 150 l~G~~iV~~~ 159 (340)
T 2bw4_A 150 MNGAIMVLPR 159 (340)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEccC
Confidence 9998888643
No 114
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=51.31 E-value=9.5 Score=35.69 Aligned_cols=77 Identities=12% Similarity=0.129 Sum_probs=44.9
Q ss_pred CCCeeeecCEEEEeeCCC---CceEE-----EEccccccCC--CCCCCcccCCCCC---cEEEeCCCCcEEEEcCCCC--
Q 020242 188 RNNNFSVGDILVFDYPAR---VHDVV-----EVTKAAYDSC--NSSSTISKSTNPP---TRITLGTAGEHYFFCTFPG-- 252 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~---~h~V~-----~V~~~~y~~C--~~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~-- 252 (329)
..++++.||+|++++.+. .+++. +......|.= ....+ ...|. ..|+++.+|++||-|....
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~---I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~ 111 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQP---IEAGDSYTYKFKADRIGTLWYHCHVNVNE 111 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCC---BCTTCEEEEEEECCSCEEEEEECCSSHHH
T ss_pred CeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCc---cCCCCeEEEEEECCCCEEEEEEecCCchh
Confidence 347889999999988643 22222 1111001110 00011 22232 4678889999999998754
Q ss_pred CCC-CCCeEEEEecCC
Q 020242 253 HCS-AGQKLAVNVTGG 267 (329)
Q Consensus 253 HC~-~GmKl~I~V~~~ 267 (329)
|-. .||-..|.|...
T Consensus 112 q~~~~Gl~G~liV~p~ 127 (339)
T 2zwn_A 112 HVGVRGMWGPLIVDPK 127 (339)
T ss_dssp HTTTSCCEEEEEEECS
T ss_pred hhhcCCceEeEEecCC
Confidence 444 899988888654
No 115
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=51.28 E-value=7.9 Score=34.57 Aligned_cols=13 Identities=0% Similarity=-0.598 Sum_probs=9.1
Q ss_pred CCCceeeCCEEEE
Q 020242 15 CLFSFFFFTFSVF 27 (329)
Q Consensus 15 ~~~tf~vGD~LvF 27 (329)
.+..+.|||+|.-
T Consensus 17 DKt~a~vGDIItA 29 (227)
T 3ghp_A 17 DKNAAEVGEIIKA 29 (227)
T ss_dssp SCSCCCTTCEEEE
T ss_pred ccceeecCcEEEE
Confidence 3457889998854
No 116
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=47.62 E-value=16 Score=36.54 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=49.4
Q ss_pred CCCeeeecCEEEEeeCCCC----ceEEE--Ecc---ccccC-CC-CCCCcccCCCCC---cEEEeC-CCCcEEEEcCCCC
Q 020242 188 RNNNFSVGDILVFDYPARV----HDVVE--VTK---AAYDS-CN-SSSTISKSTNPP---TRITLG-TAGEHYFFCTFPG 252 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~----h~V~~--V~~---~~y~~-C~-~~~~i~~~~~G~---~~v~L~-~~G~~YFic~~~~ 252 (329)
..++++.||.|+.++.++. +++.. +.+ ...|. .. ...+| ..|. ..|+++ ..|++||-|....
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI---~PG~~~~Y~f~~~~~~GT~wYH~H~~~ 110 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPI---APGSTMLYNFTVDYNVGTYWYHSHTDG 110 (534)
T ss_dssp CCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECSSCCEEEEEECCSSS
T ss_pred ccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCc---CCCCeEEEEEEeCccceeEEEEEcCcc
Confidence 3478999999999987543 22221 111 11111 00 00122 2232 367787 8999999999988
Q ss_pred CCCCCCeEEEEecCCC
Q 020242 253 HCSAGQKLAVNVTGGS 268 (329)
Q Consensus 253 HC~~GmKl~I~V~~~~ 268 (329)
|-..||...|.|....
T Consensus 111 q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 111 QYEDGMKGLFIIKDDS 126 (534)
T ss_dssp GGGGTCEEEEEEECTT
T ss_pred cccCcceeeEEeCCCC
Confidence 8889999999998754
No 117
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=46.69 E-value=9.8 Score=35.40 Aligned_cols=80 Identities=13% Similarity=0.139 Sum_probs=0.0
Q ss_pred CeeeecCEEEEeeCCCC--------ceEEEEcccccc--CCCCCCCcccCCCCCcEEEeCCCCcEEEEcCCCCCCC---C
Q 020242 190 NNFSVGDILVFDYPARV--------HDVVEVTKAAYD--SCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCS---A 256 (329)
Q Consensus 190 ~~f~vGD~LvF~y~~~~--------h~V~~V~~~~y~--~C~~~~~i~~~~~G~~~v~L~~~G~~YFic~~~~HC~---~ 256 (329)
++++.||.|++++.+.. |.+.+......| .-....+|....+-...++++.+|++||-|....+=+ .
T Consensus 36 i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~ 115 (318)
T 3g5w_A 36 IHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMR 115 (318)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHS
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccC
Q ss_pred CCeEEEEecCCCC
Q 020242 257 GQKLAVNVTGGSS 269 (329)
Q Consensus 257 GmKl~I~V~~~~~ 269 (329)
||...|.|.....
T Consensus 116 Gl~G~lIV~~~~~ 128 (318)
T 3g5w_A 116 GMWGPLIVEPKNP 128 (318)
T ss_dssp CCEEEEEEECSSC
T ss_pred CCEEEEEEcCCCc
No 118
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=46.15 E-value=11 Score=37.87 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=49.6
Q ss_pred CCCeeeecCEEEEeeCCCC----ceEEE--Ecc---ccccCCC--CCCCcccCCC-CC---cEEEeCCCCcEEEEcCCCC
Q 020242 188 RNNNFSVGDILVFDYPARV----HDVVE--VTK---AAYDSCN--SSSTISKSTN-PP---TRITLGTAGEHYFFCTFPG 252 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~----h~V~~--V~~---~~y~~C~--~~~~i~~~~~-G~---~~v~L~~~G~~YFic~~~~ 252 (329)
..++++.||+|++++.+.. +++.. +.+ ...|.=- ...+| .. |. ..|+++.+|++||-|....
T Consensus 67 P~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I---~P~G~~~~Y~f~~~q~GT~wYH~H~~~ 143 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPI---PPKGGQRTYRWRARQYGTSWYHSHFSA 143 (559)
T ss_dssp CCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTTEEEEEEEECCSCEEEEEEECSTT
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCcc---CCCCCeEEEEEECCCCEEEEEEEcccc
Confidence 3478899999999886432 44432 111 1112100 00112 22 32 4678889999999999988
Q ss_pred CCCCCCeEEEEecCCC
Q 020242 253 HCSAGQKLAVNVTGGS 268 (329)
Q Consensus 253 HC~~GmKl~I~V~~~~ 268 (329)
|=..||-..|.|....
T Consensus 144 q~~~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 144 QYGNGVVGTIQINGPA 159 (559)
T ss_dssp GGGGTCEEEEEEECCC
T ss_pred hhcCCceEEEEecCCC
Confidence 8889999999998643
No 119
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=45.48 E-value=17 Score=36.35 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=49.7
Q ss_pred CCCeeeecCEEEEeeCCCC----ceEEE--Ecc--c-cccCCC--CCCCcccCCCCC---cEEEeCCCCcEEEEcCCCCC
Q 020242 188 RNNNFSVGDILVFDYPARV----HDVVE--VTK--A-AYDSCN--SSSTISKSTNPP---TRITLGTAGEHYFFCTFPGH 253 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~----h~V~~--V~~--~-~y~~C~--~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~H 253 (329)
.-++++.||+|+.++.+.. +++.. +.+ . ..|.-- ...+| ..|. ..|+++..|++||-|....|
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I---~PG~s~tY~f~~~~~GT~wYHsH~~~q 110 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAI---NPGETFFYNFTVDNPGTFFYHGHLGMQ 110 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECCSCEEEEEEECSTTT
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCc---CCCCeEEEEEECCCCEEEEEEECchhH
Confidence 3578999999999886432 33332 111 1 112100 00112 2332 36778899999999999888
Q ss_pred CCCCCeEEEEecCCC
Q 020242 254 CSAGQKLAVNVTGGS 268 (329)
Q Consensus 254 C~~GmKl~I~V~~~~ 268 (329)
=..||-..|.|....
T Consensus 111 ~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 111 RSAGLYGSLIVDPPQ 125 (552)
T ss_dssp GGGTCEEEEEEECCT
T ss_pred HhccCeeeEEEeCCc
Confidence 889999999998754
No 120
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=45.35 E-value=7.1 Score=30.27 Aligned_cols=26 Identities=12% Similarity=-0.005 Sum_probs=19.6
Q ss_pred cCCChhhccCCCceeeCCEEEEEEcC
Q 020242 6 LISDIDVFLCLFSFFFFTFSVFNFAA 31 (329)
Q Consensus 6 ~~~~y~~Wa~~~tf~vGD~LvF~y~~ 31 (329)
+..+-...+.++.+++||.|+|.|..
T Consensus 65 l~~GW~~Fv~~~~L~~GD~lvF~~~~ 90 (104)
T 1yel_A 65 LTVGWENFVKDNNLEDGKYLQFIYDR 90 (104)
T ss_dssp ECTTHHHHHHHHTCCTTCEEEEEECS
T ss_pred EccChHHHHHHcCCCCCCEEEEEEcC
Confidence 34444555667789999999999974
No 121
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=44.78 E-value=6.3 Score=32.93 Aligned_cols=25 Identities=32% Similarity=0.446 Sum_probs=18.5
Q ss_pred CCCeeeecCEEEEeeCCCCceEEEE
Q 020242 188 RNNNFSVGDILVFDYPARVHDVVEV 212 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~~h~V~~V 212 (329)
..+.+++||.++|++.....-+++|
T Consensus 113 ~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 113 LENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHcCCCCCCEEEEEEecCCceEEEE
Confidence 5688999999999998643334444
No 122
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=44.11 E-value=12 Score=33.31 Aligned_cols=23 Identities=13% Similarity=0.076 Sum_probs=12.7
Q ss_pred eCCEEEEEEcCCCCcEEE-e---CcccccC
Q 020242 21 FFTFSVFNFAAGNHDVTR-V---TQSSFNA 46 (329)
Q Consensus 21 vGD~LvF~y~~~~H~V~~-V---~~~~y~~ 46 (329)
.|=+|-.+|++ .|+| | +...|.+
T Consensus 40 AGYQvNIKYDP---~vLQaVnp~TG~~y~~ 66 (227)
T 3ghp_A 40 SGYQVNIKYDP---TVLQAVNPKTGVAYTN 66 (227)
T ss_dssp EEEEEEEECCT---TTEEEECTTTCCBCCT
T ss_pred cceEEeeeeCh---hheecccCCCCCcccc
Confidence 45556677765 4555 3 3445655
No 123
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=41.82 E-value=20 Score=36.46 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=48.2
Q ss_pred CCeeeecCEEEEeeCCCC----ceEEE--Ecc---ccccCCC--CCCCcccCCCCC---cEEEeCCCCcEEEEcCCCCCC
Q 020242 189 NNNFSVGDILVFDYPARV----HDVVE--VTK---AAYDSCN--SSSTISKSTNPP---TRITLGTAGEHYFFCTFPGHC 254 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~~----h~V~~--V~~---~~y~~C~--~~~~i~~~~~G~---~~v~L~~~G~~YFic~~~~HC 254 (329)
-++++.||+|+.++.++. +++.. +.+ ...|.=. ...+| ..|. ..|++++.|++||-|....|=
T Consensus 99 ~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI---~PG~sftY~f~~~q~GT~WYHsH~~~q~ 175 (580)
T 3sqr_A 99 AIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPI---APGDTLTYKFQVTQYGTTWYHSHFSLQY 175 (580)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECCCCEEEEEEECSTTGG
T ss_pred eEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCC---CCCCeEEEEEECCCCcceEEeecccccc
Confidence 478899999999886432 23332 111 1111000 00122 2333 467888999999999998888
Q ss_pred CCCCeEEEEecCCC
Q 020242 255 SAGQKLAVNVTGGS 268 (329)
Q Consensus 255 ~~GmKl~I~V~~~~ 268 (329)
..||-..|.|....
T Consensus 176 ~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 176 GDGLFGPLIINGPA 189 (580)
T ss_dssp GGTCEEEEEEECCC
T ss_pred cCcCEEEEEeeCcc
Confidence 88999999987543
No 124
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=40.98 E-value=28 Score=34.80 Aligned_cols=76 Identities=8% Similarity=0.018 Sum_probs=47.2
Q ss_pred CceeeCCEEEEEEcCCC----CcEEE--eCc--cc-ccC-CCCCCCCcccCCCC---cEEEecccCceEEEcCCCCCCCC
Q 020242 17 FSFFFFTFSVFNFAAGN----HDVTR--VTQ--SS-FNA-CNTTSPLSRTTNSP---ASVTLTASGPHYFICSFPGHCLG 83 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~~----H~V~~--V~~--~~-y~~-C~~~~~~~~~~~G~---~~v~L~~~G~~yFiCs~~~HC~~ 83 (329)
++++.||+|+.++.+.. ++|.- +-+ .. .|. -..+. .....|. ..++++..|++||-|-...|=..
T Consensus 36 I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq--~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~ 113 (552)
T 1aoz_A 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ--CAINPGETFFYNFTVDNPGTFFYHGHLGMQRSA 113 (552)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECCSCEEEEEEECSTTTGGG
T ss_pred EEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc--CCcCCCCeEEEEEECCCCEEEEEEECchhHHhc
Confidence 47899999999997543 22211 111 11 111 00000 0112233 46788899999999999888889
Q ss_pred CCeEEEEeecC
Q 020242 84 GQKLAINVSAR 94 (329)
Q Consensus 84 GmKl~I~V~~~ 94 (329)
||...|.|...
T Consensus 114 Gl~G~liV~~~ 124 (552)
T 1aoz_A 114 GLYGSLIVDPP 124 (552)
T ss_dssp TCEEEEEEECC
T ss_pred cCeeeEEEeCC
Confidence 99999999764
No 125
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=40.15 E-value=21 Score=31.69 Aligned_cols=85 Identities=15% Similarity=0.202 Sum_probs=50.8
Q ss_pred eEEEEeccCCcccCCCCCcCcccc----cCCCeeeecCEEEEeeCCC--CceEEEEccccccCCCCCCCcc-cCCCCC--
Q 020242 163 ATHVVGGALGWTVPPNASVGYQNW----ARNNNFSVGDILVFDYPAR--VHDVVEVTKAAYDSCNSSSTIS-KSTNPP-- 233 (329)
Q Consensus 163 ~~~~VGg~~GW~~~~~~~~~Y~~W----a~~~~f~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~~i~-~~~~G~-- 233 (329)
+..++|-.=.|.+. |.+- .+...+.+|+.|.|.-.+. .|+...-+ + .++ ..-.|.
T Consensus 18 tIkVig~QW~W~f~------Ypd~~i~~~n~l~lP~g~~V~~~lTS~DViHSF~IP~---l-------gvK~daiPGr~n 81 (205)
T 1cyx_A 18 TIEVVSMDWKWFFI------YPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIPR---L-------GSQIYAMAGMQT 81 (205)
T ss_dssp EEEEEEETTEEEEE------ETTTTEEEESEEEEETTSCEEEEEEESSSCEEEEEGG---G-------TEEEEECTTCCE
T ss_pred EEEEEEEEeEEEEE------eCCCCccccceEEEeCCCEEEEEEecCCceeeEEecc---c-------CcEEEecCCceE
Confidence 34556766667652 3221 1345677888888877642 35544311 1 011 111232
Q ss_pred -cEEEeCCCCcEEEEcCCCCCCCC---CCeEEEEec
Q 020242 234 -TRITLGTAGEHYFFCTFPGHCSA---GQKLAVNVT 265 (329)
Q Consensus 234 -~~v~L~~~G~~YFic~~~~HC~~---GmKl~I~V~ 265 (329)
..++.+++|.||..|.. -|.. .|++.|.|.
T Consensus 82 ~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 82 RLHLIANEPGTYDGICAE--ICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEECCSSSEEEEEEECS--CCSTTSTTCCEEEEEE
T ss_pred EEEEEeCCCeEEEEEccc--ccccchhhceEEEEEE
Confidence 35667899999999986 6664 599999988
No 126
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=39.20 E-value=23 Score=35.12 Aligned_cols=77 Identities=13% Similarity=0.072 Sum_probs=48.0
Q ss_pred CCeeeecCEEEEeeCCCC--------ceEEE--Ecc---ccccCCC--CCCCcccCCCCC---cEEEe-CCCCcEEEEcC
Q 020242 189 NNNFSVGDILVFDYPARV--------HDVVE--VTK---AAYDSCN--SSSTISKSTNPP---TRITL-GTAGEHYFFCT 249 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~~--------h~V~~--V~~---~~y~~C~--~~~~i~~~~~G~---~~v~L-~~~G~~YFic~ 249 (329)
-++++.||.|+.++.+.. +++.. +.+ ...|.-. ...+| ..|. ..|++ +..|++||-|.
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI---~PG~sftY~f~~~~~~GT~wYHsH 112 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPI---IVGNSFSYNFNVPGMAGTYWYHSH 112 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECTTCCEEEEEEEC
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCC---CCCCeEEEEEEeCCCCceeeeecc
Confidence 478999999999886432 23432 111 1111100 00112 2232 36777 67999999999
Q ss_pred CCCCCCCCCeEEEEecCCC
Q 020242 250 FPGHCSAGQKLAVNVTGGS 268 (329)
Q Consensus 250 ~~~HC~~GmKl~I~V~~~~ 268 (329)
...|=..||-..|.|....
T Consensus 113 ~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 113 LTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp STTGGGGTCEEEEEEECTT
T ss_pred chhHHhcCceEEEEEcCcc
Confidence 9888889999999997543
No 127
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=38.40 E-value=30 Score=34.57 Aligned_cols=76 Identities=11% Similarity=0.053 Sum_probs=46.6
Q ss_pred CceeeCCEEEEEEcCCCC---------cEEEeCcccccC-CCCCCCCcccCCCC---cEEEec-ccCceEEEcCCCCCCC
Q 020242 17 FSFFFFTFSVFNFAAGNH---------DVTRVTQSSFNA-CNTTSPLSRTTNSP---ASVTLT-ASGPHYFICSFPGHCL 82 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~~H---------~V~~V~~~~y~~-C~~~~~~~~~~~G~---~~v~L~-~~G~~yFiCs~~~HC~ 82 (329)
++++.||+|+.++.++.. -+.+-.....|. ...+. .....|. ..++++ ..|++||-|-...|-.
T Consensus 36 i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq--~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~ 113 (534)
T 1zpu_A 36 ITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ--CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYE 113 (534)
T ss_dssp EEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGG
T ss_pred EEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc--CCcCCCCeEEEEEEeCccceeEEEEEcCccccc
Confidence 478899999999986432 221100001111 00000 0112233 367787 8999999999988888
Q ss_pred CCCeEEEEeecC
Q 020242 83 GGQKLAINVSAR 94 (329)
Q Consensus 83 ~GmKl~I~V~~~ 94 (329)
.||...|.|...
T Consensus 114 ~Gl~G~liV~~~ 125 (534)
T 1zpu_A 114 DGMKGLFIIKDD 125 (534)
T ss_dssp GTCEEEEEEECT
T ss_pred CcceeeEEeCCC
Confidence 899998888754
No 128
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=37.84 E-value=25 Score=34.97 Aligned_cols=77 Identities=10% Similarity=0.101 Sum_probs=47.8
Q ss_pred CCeeeecCEEEEeeCCCC--------ceEEE--Ecc---ccccCCC--CCCCcccCCCCC---cEEEe-CCCCcEEEEcC
Q 020242 189 NNNFSVGDILVFDYPARV--------HDVVE--VTK---AAYDSCN--SSSTISKSTNPP---TRITL-GTAGEHYFFCT 249 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~~--------h~V~~--V~~---~~y~~C~--~~~~i~~~~~G~---~~v~L-~~~G~~YFic~ 249 (329)
-++++.||+|+.++.++. +++.- +.+ ...|.-. ...+| ..|. ..|++ +..|++||-|.
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI---~PG~s~tY~f~~~~~~GT~wYHsH 111 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPI---SPGHSFLYDFQVPDQAGTFWYHSH 111 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECSSCCEEEEEEEC
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCC---CCCCeEEEEEEcCCCCceeeeecc
Confidence 478999999999886432 33432 111 1111100 00122 2332 35777 67999999999
Q ss_pred CCCCCCCCCeEEEEecCCC
Q 020242 250 FPGHCSAGQKLAVNVTGGS 268 (329)
Q Consensus 250 ~~~HC~~GmKl~I~V~~~~ 268 (329)
...|=..||-..|.|....
T Consensus 112 ~~~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 112 LSTQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp STTGGGGTCEEEEEEECTT
T ss_pred chhHHhccceeEEEEcCCc
Confidence 9888789999999997543
No 129
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=37.59 E-value=20 Score=35.97 Aligned_cols=74 Identities=9% Similarity=0.066 Sum_probs=46.4
Q ss_pred CceeeCCEEEEEEcCCC----CcEEE--eCc---ccccC-CCCC-CCCcccCC-CC---cEEEecccCceEEEcCCCCCC
Q 020242 17 FSFFFFTFSVFNFAAGN----HDVTR--VTQ---SSFNA-CNTT-SPLSRTTN-SP---ASVTLTASGPHYFICSFPGHC 81 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~~----H~V~~--V~~---~~y~~-C~~~-~~~~~~~~-G~---~~v~L~~~G~~yFiCs~~~HC 81 (329)
++++.||+|+.++.+.. ++|.- +-+ ...|. -..+ .+ ... |. ..++++..|++||-|-...|=
T Consensus 69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~---I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~ 145 (559)
T 2q9o_A 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECP---IPPKGGQRTYRWRARQYGTSWYHSHFSAQY 145 (559)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCC---BCTTTEEEEEEEECCSCEEEEEEECSTTGG
T ss_pred EEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCc---cCCCCCeEEEEEECCCCEEEEEEEcccchh
Confidence 36789999999997533 23321 111 11111 0000 01 122 33 468888999999999998888
Q ss_pred CCCCeEEEEeec
Q 020242 82 LGGQKLAINVSA 93 (329)
Q Consensus 82 ~~GmKl~I~V~~ 93 (329)
..||...|.|..
T Consensus 146 ~~Gl~G~liV~~ 157 (559)
T 2q9o_A 146 GNGVVGTIQING 157 (559)
T ss_dssp GGTCEEEEEEEC
T ss_pred cCCceEEEEecC
Confidence 899999998874
No 130
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=36.25 E-value=27 Score=32.67 Aligned_cols=67 Identities=12% Similarity=0.198 Sum_probs=41.8
Q ss_pred CCeeeecCEEEEeeCCC--CceEEEEccccccCCCCCCCcc-cCCCCC---cEEEeCCCCcEEEEcCCCCCCCC---CCe
Q 020242 189 NNNFSVGDILVFDYPAR--VHDVVEVTKAAYDSCNSSSTIS-KSTNPP---TRITLGTAGEHYFFCTFPGHCSA---GQK 259 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~~i~-~~~~G~---~~v~L~~~G~~YFic~~~~HC~~---GmK 259 (329)
...+.+|+.+.|.-.+. .|+...-+ + .++ ..-.|. ..++.+++|.||..|.. -|.. .|+
T Consensus 190 ~lvlP~g~~V~~~ltS~DViHsf~iP~---l-------g~k~daiPG~~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~ 257 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATDVIHAWTIPA---F-------AVKQDAVPGRIAQLWFSVDQEGVYFGQCSE--LCGINHAYMP 257 (298)
T ss_dssp CEEEESSSEEEEEEEESSSCEEEEEGG---G-------TEEEEECTTCCEEEEEECSSSEEEEECCCS--CCSTTTTSCC
T ss_pred eEEEEcCCEEEEEEEeCCccceeeEcc---c-------CceEEecCCceEEEEEEeCCCEEEEEEccc--ccCcCccCCe
Confidence 34566788888777542 35544311 1 011 111232 35778999999999987 5664 599
Q ss_pred EEEEecCC
Q 020242 260 LAVNVTGG 267 (329)
Q Consensus 260 l~I~V~~~ 267 (329)
+.|.|...
T Consensus 258 ~~v~vvs~ 265 (298)
T 3hb3_B 258 IVVKAVSQ 265 (298)
T ss_dssp EEEEEECH
T ss_pred eEEEEEcH
Confidence 99999873
No 131
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=35.53 E-value=29 Score=31.73 Aligned_cols=67 Identities=12% Similarity=0.196 Sum_probs=43.0
Q ss_pred CCCeeeecCEEEEeeCCC--CceEEEEccccccCCCCCCCcc-cCCCCC---cEEEeCCCCcEEEEcCCCCCCCCC---C
Q 020242 188 RNNNFSVGDILVFDYPAR--VHDVVEVTKAAYDSCNSSSTIS-KSTNPP---TRITLGTAGEHYFFCTFPGHCSAG---Q 258 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~~i~-~~~~G~---~~v~L~~~G~~YFic~~~~HC~~G---m 258 (329)
+...+.+|+.+.|.-.+. .|+...-+ + .++ ..-.|. ..++.+++|.||..|+. -|..| |
T Consensus 171 n~l~lP~g~~v~~~~tS~DViHsf~ip~---l-------~~k~da~PG~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M 238 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADVIHSWTVPA---F-------GVKQDAVPGRLAQLWFRAEREGIFFGQCSE--LCGISHAYM 238 (262)
T ss_dssp SCEEEETTSEEEEEEEESSSCEEEEEGG---G-------TEEEEECBTCCEEEEEECCSCEEEEECCCS--CCSTTGGGC
T ss_pred ceEEEecCCEEEEEEEECcccceeeecc---c-------CceEEecCCceeEEEEecCCcEEEEEEChH--hcccCcccC
Confidence 345778888888887643 35544311 1 011 111222 35788999999999987 67765 9
Q ss_pred eEEEEecC
Q 020242 259 KLAVNVTG 266 (329)
Q Consensus 259 Kl~I~V~~ 266 (329)
++.|.|..
T Consensus 239 ~~~v~vv~ 246 (262)
T 2gsm_B 239 PITVKVVS 246 (262)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEEc
Confidence 99998875
No 132
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=33.36 E-value=6.8 Score=36.14 Aligned_cols=79 Identities=13% Similarity=0.248 Sum_probs=32.9
Q ss_pred CCeeeecCEEEEeeCCCC-c-eEEEE--ccccccC-CCCCCCcc--cCCCCCcEEEeCCCCcEEEEcCCCCCCCCCCeEE
Q 020242 189 NNNFSVGDILVFDYPARV-H-DVVEV--TKAAYDS-CNSSSTIS--KSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLA 261 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~~-h-~V~~V--~~~~y~~-C~~~~~i~--~~~~G~~~v~L~~~G~~YFic~~~~HC~~GmKl~ 261 (329)
..+++.||.+.|.+.+.. . ....+ ....|+. -...+.+. ....-...|+.+.+|.++|.|....|...||...
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~ 295 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAY 295 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEETTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeeeCCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEE
Confidence 467888999988875421 1 22211 1222221 00011111 1112234567788999999999999999999999
Q ss_pred EEecCC
Q 020242 262 VNVTGG 267 (329)
Q Consensus 262 I~V~~~ 267 (329)
|.|...
T Consensus 296 ~~V~~~ 301 (306)
T 1sdd_A 296 IDIKNC 301 (306)
T ss_dssp C-----
T ss_pred EEEecC
Confidence 988753
No 133
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=33.27 E-value=27 Score=31.21 Aligned_cols=30 Identities=13% Similarity=0.296 Sum_probs=24.9
Q ss_pred EEEeCCCCcEEEEcCCCCCCCCC---CeEEEEecC
Q 020242 235 RITLGTAGEHYFFCTFPGHCSAG---QKLAVNVTG 266 (329)
Q Consensus 235 ~v~L~~~G~~YFic~~~~HC~~G---mKl~I~V~~ 266 (329)
.++.+++|.||..|+. -|..| |.+.|.|..
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 5677899999999987 77765 999988865
No 134
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=32.60 E-value=7.5 Score=35.88 Aligned_cols=79 Identities=10% Similarity=0.190 Sum_probs=32.5
Q ss_pred CCceeeCCEEEEEEcCCCC--cEEEe--CcccccC-CCCCCCCcccCCCC--cEEEecccCceEEEcCCCCCCCCCCeEE
Q 020242 16 LFSFFFFTFSVFNFAAGNH--DVTRV--TQSSFNA-CNTTSPLSRTTNSP--ASVTLTASGPHYFICSFPGHCLGGQKLA 88 (329)
Q Consensus 16 ~~tf~vGD~LvF~y~~~~H--~V~~V--~~~~y~~-C~~~~~~~~~~~G~--~~v~L~~~G~~yFiCs~~~HC~~GmKl~ 88 (329)
..+++.||++.|.+-+... ....+ ....|+. =...+-+.....+. ..|+.+.+|.++|.|-+..|...||...
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~ 295 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAY 295 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEETTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeeeCCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEE
Confidence 4677889999998864321 22211 1111211 00001111111122 2466778999999999999999999998
Q ss_pred EEeecC
Q 020242 89 INVSAR 94 (329)
Q Consensus 89 I~V~~~ 94 (329)
|.|...
T Consensus 296 ~~V~~~ 301 (306)
T 1sdd_A 296 IDIKNC 301 (306)
T ss_dssp C-----
T ss_pred EEEecC
Confidence 888754
No 135
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=32.42 E-value=27 Score=30.97 Aligned_cols=78 Identities=13% Similarity=0.015 Sum_probs=44.8
Q ss_pred ccccCCChhhc----cCCCceeeCCEEEEEEcCC--CCcEEEeCcccccCCCCCCCCcc-cCCCC---cEEEecccCceE
Q 020242 3 RAELISDIDVF----LCLFSFFFFTFSVFNFAAG--NHDVTRVTQSSFNACNTTSPLSR-TTNSP---ASVTLTASGPHY 72 (329)
Q Consensus 3 ~~~~~~~y~~W----a~~~tf~vGD~LvF~y~~~--~H~V~~V~~~~y~~C~~~~~~~~-~~~G~---~~v~L~~~G~~y 72 (329)
.|-|...|.+- .....+.+|+.|.|...+. .|+... ..+ .+.. ...|. ..++.+++|.+|
T Consensus 25 QW~W~f~Ypd~~i~~~n~l~lP~g~~V~~~lTS~DViHSF~I---P~l-------gvK~daiPGr~n~l~~~~~~pG~y~ 94 (205)
T 1cyx_A 25 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFI---PRL-------GSQIYAMAGMQTRLHLIANEPGTYD 94 (205)
T ss_dssp TTEEEEEETTTTEEEESEEEEETTSCEEEEEEESSSCEEEEE---GGG-------TEEEEECTTCCEEEEECCSSSEEEE
T ss_pred EeEEEEEeCCCCccccceEEEeCCCEEEEEEecCCceeeEEe---ccc-------CcEEEecCCceEEEEEEeCCCeEEE
Confidence 45666655542 1123566777777777632 232211 011 1111 12233 247779999999
Q ss_pred EEcCCCCCCCCC---CeEEEEee
Q 020242 73 FICSFPGHCLGG---QKLAINVS 92 (329)
Q Consensus 73 FiCs~~~HC~~G---mKl~I~V~ 92 (329)
..|+. -|..| |++.|.|.
T Consensus 95 g~CsE--~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 95 GICAE--ICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEECS--CCSTTSTTCCEEEEEE
T ss_pred EEccc--ccccchhhceEEEEEE
Confidence 99986 56544 99999887
No 136
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=32.37 E-value=39 Score=34.28 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=28.6
Q ss_pred cEEEecccCceEEEcCCCCCCCCCCeEEEEeec
Q 020242 61 ASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 93 (329)
Q Consensus 61 ~~v~L~~~G~~yFiCs~~~HC~~GmKl~I~V~~ 93 (329)
..|+++..|++||-|-...|=..||...|.|..
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~ 187 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIING 187 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeC
Confidence 468888999999999988888889999988874
No 137
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=30.65 E-value=94 Score=29.11 Aligned_cols=85 Identities=12% Similarity=0.099 Sum_probs=54.0
Q ss_pred eEEEEeccCCcccCCCCCcCcccc----cCCCeeeecCEEEEeeCCC--CceEEEEccccccCCCCCCCcc-cCCCCC--
Q 020242 163 ATHVVGGALGWTVPPNASVGYQNW----ARNNNFSVGDILVFDYPAR--VHDVVEVTKAAYDSCNSSSTIS-KSTNPP-- 233 (329)
Q Consensus 163 ~~~~VGg~~GW~~~~~~~~~Y~~W----a~~~~f~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~~i~-~~~~G~-- 233 (329)
+..++|-.=.|.+. |.+- .+...+.+|..+.|.-.+. .|+...-+ + .++ ..-.|.
T Consensus 128 tIkVig~QW~W~f~------Ypd~~i~t~n~l~lP~g~~V~~~lTS~DViHsf~IP~---l-------g~k~DaiPGr~n 191 (315)
T 1fft_B 128 TIEVVSMDWKWFFI------YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR---L-------GSQIYAMAGMQT 191 (315)
T ss_dssp EEEEECCTTSCEEE------CTTTCCEEESBCCCCSSSEEEEEECBSSSCEEEEEGG---G-------TEEEEECBTSCE
T ss_pred eEEEeeeeccEEEe------cCCCcccccceEEEeCCCEEEEEEEeCCccceeeecc---c-------CcEEeecCCcce
Confidence 45566777778752 3321 2456788999999998753 35555311 1 011 111222
Q ss_pred -cEEEeCCCCcEEEEcCCCCCCCC---CCeEEEEec
Q 020242 234 -TRITLGTAGEHYFFCTFPGHCSA---GQKLAVNVT 265 (329)
Q Consensus 234 -~~v~L~~~G~~YFic~~~~HC~~---GmKl~I~V~ 265 (329)
..++.+++|.||..|.. -|.. .|++.|.|.
T Consensus 192 ~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 192 RLHLIANEPGTYDGISAS--YSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EEEEECCSCBCCEEBCCS--CCSTTTTTCCEECCBC
T ss_pred eeEEecCCCeEEEEeccc--cchhhHHhccceEEEe
Confidence 35778999999999986 6765 499998888
No 138
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=29.77 E-value=37 Score=33.95 Aligned_cols=75 Identities=11% Similarity=0.184 Sum_probs=46.2
Q ss_pred CCeeeecCEEEEeeCCCC--ceEEEE-ccccccCCCCCCCcc-cCCCCCcEEEeCCCCcEEEEcCCCCCCCCCC-eEEEE
Q 020242 189 NNNFSVGDILVFDYPARV--HDVVEV-TKAAYDSCNSSSTIS-KSTNPPTRITLGTAGEHYFFCTFPGHCSAGQ-KLAVN 263 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~~--h~V~~V-~~~~y~~C~~~~~i~-~~~~G~~~v~L~~~G~~YFic~~~~HC~~Gm-Kl~I~ 263 (329)
+.-++-|..|.|.=-... .-++.+ +-.+...|...-..- .+.-| ....| ++|.|||..+...-|++|. ++.|.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFELG-KMYSV-ESGDYFMTASTTELCNDNNLRIHVH 489 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCccccc-ceEec-CCCceEecCChHHHHhCCceeEEEE
Confidence 466788888888543221 111111 444556788653221 11111 23334 6899999999999999997 89888
Q ss_pred ec
Q 020242 264 VT 265 (329)
Q Consensus 264 V~ 265 (329)
|.
T Consensus 490 ~~ 491 (491)
T 3l6w_A 490 VD 491 (491)
T ss_pred eC
Confidence 73
No 139
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=29.52 E-value=44 Score=33.03 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=28.3
Q ss_pred cEEEe-cccCceEEEcCCCCCCCCCCeEEEEeecC
Q 020242 61 ASVTL-TASGPHYFICSFPGHCLGGQKLAINVSAR 94 (329)
Q Consensus 61 ~~v~L-~~~G~~yFiCs~~~HC~~GmKl~I~V~~~ 94 (329)
..|++ +..|++||-|-...|=..||...|.|...
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDP 130 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCc
Confidence 36777 67999999999888878999999999743
No 140
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=28.84 E-value=46 Score=32.95 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=28.1
Q ss_pred cEEEe-cccCceEEEcCCCCCCCCCCeEEEEeecC
Q 020242 61 ASVTL-TASGPHYFICSFPGHCLGGQKLAINVSAR 94 (329)
Q Consensus 61 ~~v~L-~~~G~~yFiCs~~~HC~~GmKl~I~V~~~ 94 (329)
..|++ +..|++||-|-...|=..||...|.|...
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCC
Confidence 35777 67999999999888878899999999743
No 141
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=28.79 E-value=37 Score=33.95 Aligned_cols=74 Identities=11% Similarity=0.107 Sum_probs=42.6
Q ss_pred CceeeCCEEEEEEcCCC--CcEEEe-CcccccCCCCCCCC-cccCCCCcEEEecccCceEEEcCCCCCCCCCC-eEEEEe
Q 020242 17 FSFFFFTFSVFNFAAGN--HDVTRV-TQSSFNACNTTSPL-SRTTNSPASVTLTASGPHYFICSFPGHCLGGQ-KLAINV 91 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~~~--H~V~~V-~~~~y~~C~~~~~~-~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~Gm-Kl~I~V 91 (329)
.-++-|-.|.|.=-... .-++.+ +-.....|...--. ..+.=| .+..| ++|.|||..+...-|++|. |+.|.|
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (491)
T 3l6w_A 413 VVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFELG-KMYSV-ESGDYFMTASTTELCNDNNLRIHVHV 490 (491)
T ss_pred eEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCccccc-ceEec-CCCceEecCChHHHHhCCceeEEEEe
Confidence 34566777777432211 112222 33344457653221 112212 23455 4899999999999999998 999987
Q ss_pred e
Q 020242 92 S 92 (329)
Q Consensus 92 ~ 92 (329)
.
T Consensus 491 ~ 491 (491)
T 3l6w_A 491 D 491 (491)
T ss_pred C
Confidence 3
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=28.62 E-value=38 Score=31.65 Aligned_cols=30 Identities=13% Similarity=0.142 Sum_probs=24.5
Q ss_pred EEEecccCceEEEcCCCCCCCC---CCeEEEEeec
Q 020242 62 SVTLTASGPHYFICSFPGHCLG---GQKLAINVSA 93 (329)
Q Consensus 62 ~v~L~~~G~~yFiCs~~~HC~~---GmKl~I~V~~ 93 (329)
.++.+++|.||..|+. -|.. .|++.|.|..
T Consensus 232 ~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 232 WFSVDQEGVYFGQCSE--LCGINHAYMPIVVKAVS 264 (298)
T ss_dssp EEECSSSEEEEECCCS--CCSTTTTSCCEEEEEEC
T ss_pred EEEeCCCEEEEEEccc--ccCcCccCCeeEEEEEc
Confidence 5788999999999986 5654 4999999874
No 143
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=27.91 E-value=19 Score=27.76 Aligned_cols=18 Identities=33% Similarity=0.558 Sum_probs=15.3
Q ss_pred CCCeeeecCEEEEeeCCC
Q 020242 188 RNNNFSVGDILVFDYPAR 205 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~ 205 (329)
..+.+++||.|+|+|...
T Consensus 74 ~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 74 KDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHTCCTTCEEEEEECSS
T ss_pred HHcCCCCCCEEEEEEcCC
Confidence 467899999999999754
No 144
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=27.37 E-value=21 Score=34.75 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=47.5
Q ss_pred CCeeeecCEEEEeeCCC---CceEEE----EccccccCCCCCCCcccCCCCCcEEEeCC-CCcEEEEcCC----CCCCCC
Q 020242 189 NNNFSVGDILVFDYPAR---VHDVVE----VTKAAYDSCNSSSTISKSTNPPTRITLGT-AGEHYFFCTF----PGHCSA 256 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~---~h~V~~----V~~~~y~~C~~~~~i~~~~~G~~~v~L~~-~G~~YFic~~----~~HC~~ 256 (329)
-++++.||.|++++.+. .+++.. +.. +.|.- ...+|....+=...|+++. +|++||=|.. ..|-..
T Consensus 51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~DG~-~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~ 128 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG-PLMGG-PARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYN 128 (451)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCG-GGSCS-GGGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHT
T ss_pred eEEEeCCCEEEEEEEECCCCCccEEECCccCCC-CCCCC-CcCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhh
Confidence 46789999999988654 344432 111 12210 0112221111134788886 9999999987 335568
Q ss_pred CCeEEEEecCCC
Q 020242 257 GQKLAVNVTGGS 268 (329)
Q Consensus 257 GmKl~I~V~~~~ 268 (329)
||-..|.|....
T Consensus 129 Gl~G~liV~~~~ 140 (451)
T 2uxt_A 129 GLAGMWLVEDEV 140 (451)
T ss_dssp TCEEEEEEECHH
T ss_pred cceEEEEEecCc
Confidence 999999998643
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=27.19 E-value=42 Score=30.61 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=24.7
Q ss_pred EEEecccCceEEEcCCCCCCCCC---CeEEEEeec
Q 020242 62 SVTLTASGPHYFICSFPGHCLGG---QKLAINVSA 93 (329)
Q Consensus 62 ~v~L~~~G~~yFiCs~~~HC~~G---mKl~I~V~~ 93 (329)
.++.+++|.+|..|+. -|..| |++.|.|..
T Consensus 214 ~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 214 WFRAEREGIFFGQCSE--LCGISHAYMPITVKVVS 246 (262)
T ss_dssp EEECCSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEChH--hcccCcccCeEEEEEEc
Confidence 5788999999999986 67665 999888864
No 146
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=25.08 E-value=40 Score=30.05 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=24.5
Q ss_pred EEEecccCceEEEcCCCCCCCCC---CeEEEEeec
Q 020242 62 SVTLTASGPHYFICSFPGHCLGG---QKLAINVSA 93 (329)
Q Consensus 62 ~v~L~~~G~~yFiCs~~~HC~~G---mKl~I~V~~ 93 (329)
.++.+++|.+|..|+. -|..| |.+.|.|..
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 4678999999999986 67766 999888864
No 147
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=24.74 E-value=58 Score=30.45 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=26.8
Q ss_pred cccCceEEEcCCCCCCCCCCeEEEEeecCCC
Q 020242 66 TASGPHYFICSFPGHCLGGQKLAINVSARGS 96 (329)
Q Consensus 66 ~~~G~~yFiCs~~~HC~~GmKl~I~V~~~~~ 96 (329)
+.+|.++|-|-+..|=..||...+.|.....
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 4689999999999999999999999986543
No 148
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=24.70 E-value=31 Score=28.35 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=18.3
Q ss_pred eEEEEeccCCcccCCCCCcCcccccCCCeeeecCEEEEeeC
Q 020242 163 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYP 203 (329)
Q Consensus 163 ~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~ 203 (329)
+.++|=-..||.. .++|+. ...++.-||+++|+|.
T Consensus 79 K~V~~~S~AgY~S----~V~y~~--~svtl~rG~t~~F~y~ 113 (126)
T 4dny_A 79 KMVRFVSSAGYSS----TVFYGD--RKVTLSVGNTLLFKYV 113 (126)
T ss_dssp CEEEEEEECSSCE----EEEETT--EEEEECTTCEEEEEEE
T ss_pred CEEEEEEecCccE----EEEECC--cEEEecCCCEEEEEEc
Confidence 4444544555543 233443 4456666666666663
No 149
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=24.59 E-value=25 Score=37.01 Aligned_cols=30 Identities=7% Similarity=-0.047 Sum_probs=24.8
Q ss_pred CCCcEEEEcCCCC--CCCCCCeEEEEecCCCC
Q 020242 240 TAGEHYFFCTFPG--HCSAGQKLAVNVTGGSS 269 (329)
Q Consensus 240 ~~G~~YFic~~~~--HC~~GmKl~I~V~~~~~ 269 (329)
.+|++||-|.+.. |...||-..|.|.....
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~ 300 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNT 300 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECSTT
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCcc
Confidence 6799999999876 67799999999887543
No 150
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=24.35 E-value=44 Score=33.09 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=28.4
Q ss_pred EEEe-CCCCcEEEEcCCCCCCCCCCeEEEEecCCC
Q 020242 235 RITL-GTAGEHYFFCTFPGHCSAGQKLAVNVTGGS 268 (329)
Q Consensus 235 ~v~L-~~~G~~YFic~~~~HC~~GmKl~I~V~~~~ 268 (329)
.|++ +..|++||-|....|=..||-..|.|....
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 5674 579999999999888889999999997643
No 151
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=23.64 E-value=24 Score=34.36 Aligned_cols=76 Identities=5% Similarity=0.014 Sum_probs=44.7
Q ss_pred ceeeCCEEEEEEcCCC---CcEEE--eCc-ccccCCCCCCCCcccCCCCcEEEecc-cCceEEEcCC----CCCCCCCCe
Q 020242 18 SFFFFTFSVFNFAAGN---HDVTR--VTQ-SSFNACNTTSPLSRTTNSPASVTLTA-SGPHYFICSF----PGHCLGGQK 86 (329)
Q Consensus 18 tf~vGD~LvF~y~~~~---H~V~~--V~~-~~y~~C~~~~~~~~~~~G~~~v~L~~-~G~~yFiCs~----~~HC~~GmK 86 (329)
+++.||+|++++.+.. ++|.- +.. ...|. ....++..-.+-...++++. .|++||-|-. ..|-..||.
T Consensus 53 ~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG-~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~ 131 (451)
T 2uxt_A 53 RVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMG-GPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLA 131 (451)
T ss_dssp EEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSC-SGGGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCE
T ss_pred EEeCCCEEEEEEEECCCCCccEEECCccCCCCCCC-CCcCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcce
Confidence 6789999999997542 33321 010 11121 00011111111124788886 9999999987 345568999
Q ss_pred EEEEeecC
Q 020242 87 LAINVSAR 94 (329)
Q Consensus 87 l~I~V~~~ 94 (329)
..|.|...
T Consensus 132 G~liV~~~ 139 (451)
T 2uxt_A 132 GMWLVEDE 139 (451)
T ss_dssp EEEEEECH
T ss_pred EEEEEecC
Confidence 99999754
No 152
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=21.58 E-value=33 Score=27.75 Aligned_cols=21 Identities=10% Similarity=-0.089 Sum_probs=12.8
Q ss_pred hhccCCCceeeCCEEEEEEcC
Q 020242 11 DVFLCLFSFFFFTFSVFNFAA 31 (329)
Q Consensus 11 ~~Wa~~~tf~vGD~LvF~y~~ 31 (329)
..++..+.++.||.|+|....
T Consensus 84 ~~FV~~~~L~~GD~~~F~~~~ 104 (130)
T 1wid_A 84 SRFVKEKNLRAGDVVSFSRSN 104 (130)
T ss_dssp HHHHHHTTCCTTCEEEEEECC
T ss_pred HHHHHHcCCCCCCEEEEEEec
Confidence 334455566777777776653
No 153
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=21.07 E-value=1.8 Score=25.51 Aligned_cols=19 Identities=32% Similarity=0.697 Sum_probs=14.0
Q ss_pred CCeeeecCEEEEeeCCCCc
Q 020242 189 NNNFSVGDILVFDYPARVH 207 (329)
Q Consensus 189 ~~~f~vGD~LvF~y~~~~h 207 (329)
++.|.|.|.|.|.|....|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 5789999999999975544
No 154
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=20.97 E-value=88 Score=30.04 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=0.0
Q ss_pred CeeeecCEEEEeeCCCCceEEEE-ccccccCCCCCCCcccCCCCCc---EEEeCC--CCcEEEEcCCCC----CCCCCCe
Q 020242 190 NNFSVGDILVFDYPARVHDVVEV-TKAAYDSCNSSSTISKSTNPPT---RITLGT--AGEHYFFCTFPG----HCSAGQK 259 (329)
Q Consensus 190 ~~f~vGD~LvF~y~~~~h~V~~V-~~~~y~~C~~~~~i~~~~~G~~---~v~L~~--~G~~YFic~~~~----HC~~GmK 259 (329)
++++.||+|+.++.+....-+-+ -..-.......+.......|.. .|++.+ +|++||-|...+ |-..||.
T Consensus 49 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~ 128 (439)
T 2xu9_A 49 LRVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLL 128 (439)
T ss_dssp EEECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSCTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCC
T ss_pred EEEeCCCEEEEEEEECCCCCcceEeCCCCCCccccCCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCe
Q ss_pred EEEEecC
Q 020242 260 LAVNVTG 266 (329)
Q Consensus 260 l~I~V~~ 266 (329)
..|.|..
T Consensus 129 G~liV~~ 135 (439)
T 2xu9_A 129 GALVVES 135 (439)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
No 155
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=20.91 E-value=36 Score=25.32 Aligned_cols=15 Identities=20% Similarity=0.029 Sum_probs=13.2
Q ss_pred CceeeCCEEEEEEcC
Q 020242 17 FSFFFFTFSVFNFAA 31 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~ 31 (329)
..|++||.|.|.|..
T Consensus 52 ~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 52 SEIKTGDKVAFNFVQ 66 (80)
T ss_dssp CCCCTTCEEEEEEEE
T ss_pred hcCCCCCEEEEEEEE
Confidence 478999999999974
No 156
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=20.79 E-value=47 Score=32.69 Aligned_cols=78 Identities=10% Similarity=0.099 Sum_probs=47.0
Q ss_pred CCCeeeecCEEEEeeCCC--------CceEEE--Ecc--c-cccCCC--CCCCcccCCCCC---cEEEe-CCCCcEEEEc
Q 020242 188 RNNNFSVGDILVFDYPAR--------VHDVVE--VTK--A-AYDSCN--SSSTISKSTNPP---TRITL-GTAGEHYFFC 248 (329)
Q Consensus 188 ~~~~f~vGD~LvF~y~~~--------~h~V~~--V~~--~-~y~~C~--~~~~i~~~~~G~---~~v~L-~~~G~~YFic 248 (329)
..++++.||.|+.++.+. .+++.. +.+ . ..|.-. ...+ ...|. ..|++ +..|++||-|
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~---I~PG~~~~Y~f~~~~~~GT~wYH~ 110 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCP---ISPGHAFLYKFTPAGHAGTFWYHS 110 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCC---BCTTCEEEEEECCTTCCEEEEEEE
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCC---cCCCCeEEEEEEeCCCCccEEEEe
Confidence 457889999999988642 233332 111 1 111100 0001 22232 24553 5699999999
Q ss_pred CCCCCCCCCCeEEEEecCCC
Q 020242 249 TFPGHCSAGQKLAVNVTGGS 268 (329)
Q Consensus 249 ~~~~HC~~GmKl~I~V~~~~ 268 (329)
....|=..||-..|.|....
T Consensus 111 H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 111 HFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp CSTTGGGGTCEEEEEEECTT
T ss_pred cchhhhhCcceeeEEEcCCC
Confidence 99888888999999997643
No 157
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=20.64 E-value=37 Score=25.79 Aligned_cols=15 Identities=20% Similarity=0.029 Sum_probs=13.3
Q ss_pred CceeeCCEEEEEEcC
Q 020242 17 FSFFFFTFSVFNFAA 31 (329)
Q Consensus 17 ~tf~vGD~LvF~y~~ 31 (329)
..|++||.|.|.|..
T Consensus 60 ~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 60 SEIKTGDKVAFNFVQ 74 (88)
T ss_dssp CCCCTTCEEEEEEEE
T ss_pred hcCCCCCEEEEEEEE
Confidence 579999999999974
No 158
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=20.55 E-value=39 Score=26.86 Aligned_cols=12 Identities=33% Similarity=0.800 Sum_probs=10.5
Q ss_pred CCeeeecCEEEE
Q 020242 189 NNNFSVGDILVF 200 (329)
Q Consensus 189 ~~~f~vGD~LvF 200 (329)
-+.+++||.|+|
T Consensus 31 ~~~ikvGD~I~f 42 (109)
T 2z0t_A 31 RRQIKPGDIIIF 42 (109)
T ss_dssp GGGCCTTCEEEE
T ss_pred hhcCCCCCEEEE
Confidence 367899999999
No 159
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=20.43 E-value=39 Score=36.76 Aligned_cols=81 Identities=16% Similarity=0.097 Sum_probs=0.0
Q ss_pred CCceeeCCEEEEEEc-----CCCCcEEEeC------cccccCCCCCCCCcccCCCCcEEEecccCceEEEcCCCCCCCCC
Q 020242 16 LFSFFFFTFSVFNFA-----AGNHDVTRVT------QSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGG 84 (329)
Q Consensus 16 ~~tf~vGD~LvF~y~-----~~~H~V~~V~------~~~y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFiCs~~~HC~~G 84 (329)
..++..||.|+.+.. ..-|.+.+-. ...++.|. +....+-...++.+..|++|+-|-+..|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~----i~pg~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTAN----LFPQTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEE----ECTTCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEe----ecCCceEEEEEecCCCeEEEEecCCCcccCCC
Q ss_pred CeEEEEeecCCCCCCC
Q 020242 85 QKLAINVSARGSSPAP 100 (329)
Q Consensus 85 mKl~I~V~~~~~~p~p 100 (329)
|+..+.|........+
T Consensus 709 m~g~~~V~~~~~~~~~ 724 (1065)
T 2j5w_A 709 MKQKYTVNQCRRQSED 724 (1065)
T ss_dssp CEEEEEEECCSCCCSC
T ss_pred cEEEEEEcCCccccCC
Done!