BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020244
         (329 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus
           GN=Hgsnat PE=1 SV=2
          Length = 656

 Score =  108 bits (270), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 132/281 (46%), Gaps = 40/281 (14%)

Query: 16  LVEQEQDDGKDSENGINKEKGLERSEVQDEQKGELQLQQLLQQKSKRVATLDAFRGLTVV 75
           +  +E D   +SE G         ++ Q E +         +  + R+  +D FRGL +V
Sbjct: 223 IASRETDRLINSELGSPSRADPLSADYQPETR---------RSSANRLRCVDTFRGLALV 273

Query: 76  LMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK---- 131
           LM+ V+  GG Y    HS WNG T+AD V P+F+FI+G +I L++  + +  G  K    
Sbjct: 274 LMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQ-RGCSKLKLL 332

Query: 132 -KIIFRTLKLLFWG-IILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETL 189
            KI++R+  L+  G II+   Y   P      +    +R  G+LQR+ + Y VVA++E  
Sbjct: 333 GKIVWRSFLLICIGVIIVNPNYCLGP------LSWDKVRIPGVLQRLGVTYFVVAVLEFF 386

Query: 190 TTKRRPN--VLEPRHLSI--FTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGV 245
             K  P+   LE    S+   T+   QW+       I++  T+ L VP          G 
Sbjct: 387 FWKPVPDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVP----------GC 436

Query: 246 KKYIVKCGMRGHLG--PACN--AVGYVDRELWGINHLYSDP 282
               +  G  G LG  P C   A GY+DR L G NHLY  P
Sbjct: 437 PTGYLGPGGIGDLGKYPHCTGGAAGYIDRLLLGDNHLYQHP 477


>sp|Q68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens
           GN=HGSNAT PE=1 SV=2
          Length = 663

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 34/273 (12%)

Query: 25  KDSENGINKEKGLERSEVQDEQKGELQLQQL-LQQKSKRVATLDAFRGLTVVLMILVDDA 83
           ++++  IN E G       D   G++Q     L     R+ ++D FRG+ ++LM+ V+  
Sbjct: 231 RETDRLINSELG--SPSRTDPLDGDVQPATWRLSALPPRLRSVDTFRGIALILMVFVNYG 288

Query: 84  GGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK-----KIIFRTL 138
           GG Y    H+ WNG T+AD V P+F+FI+G +I L++  + +  G  K     KI +R+ 
Sbjct: 289 GGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQ-RGCSKFRLLGKIAWRSF 347

Query: 139 KLLFWGIIL-QGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPN- 196
            L+  GII+    Y   P      +    +R  G+LQR+ + Y VVA++E L  K  P  
Sbjct: 348 LLICIGIIIVNPNYCLGP------LSWDKVRIPGVLQRLGVTYFVVAVLELLFAKPVPEH 401

Query: 197 -VLEPRHLSI--FTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCG 253
              E   LS+   T+   QW+   +   +++  T+ L VP          G     +  G
Sbjct: 402 CASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVP----------GCPTGYLGPG 451

Query: 254 MRGHLG--PACN--AVGYVDRELWGINHLYSDP 282
             G  G  P C   A GY+DR L G +HLY  P
Sbjct: 452 GIGDFGKYPNCTGGAAGYIDRLLLGDDHLYQHP 484


>sp|Q2LCP7|NU4M_DICCI NADH-ubiquinone oxidoreductase chain 4 OS=Dictyostelium citrinum
           GN=nad4 PE=3 SV=1
          Length = 414

 Score = 35.4 bits (80), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 6/72 (8%)

Query: 15  QLVEQEQDDGKDSE-NGIN-KEKGLERSEVQDEQKGELQLQQLLQQKSKRVATLDAFR-- 70
           +++ +E ++G   E N +  KE G+ +   + E  GEL+  Q ++++S + + ++ F   
Sbjct: 322 EIITREANEGIQMEVNKMTIKEGGINKKVTEGEIIGELEYPQYIKKESMKYSDVNIFEFV 381

Query: 71  --GLTVVLMILV 80
             GL V+LM++V
Sbjct: 382 SIGLMVILMLIV 393


>sp|C5BR49|PDXB_TERTT Erythronate-4-phosphate dehydrogenase OS=Teredinibacter turnerae
           (strain ATCC 39867 / T7901) GN=pdxB PE=3 SV=1
          Length = 370

 Score = 33.1 bits (74), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 241 SDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHL 278
           +DH  K+++ + G+R    P CNA G V  +L  + HL
Sbjct: 69  TDHLDKEFLAEAGIRFASAPGCNAQGVVQYDLAALAHL 106


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.140    0.438 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,301,813
Number of Sequences: 539616
Number of extensions: 5210252
Number of successful extensions: 14774
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14750
Number of HSP's gapped (non-prelim): 26
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)