Query 020244
Match_columns 329
No_of_seqs 197 out of 771
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 13:58:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020244.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020244hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1knya2 d.218.1.1 (A:1-125) Ka 6.7 46 0.0033 25.0 -0.1 13 311-323 109-121 (125)
2 d3dtub2 f.17.2.1 (B:30-129) Ba 3.9 6E+02 0.044 17.3 5.9 23 104-126 36-58 (100)
3 d2axla1 a.4.5.43 (A:1-144) Wer 3.7 2E+02 0.015 21.4 1.9 36 38-73 7-42 (144)
4 d2nwwa1 f.49.1.1 (A:12-416) Pr 3.4 8.6E+02 0.063 20.4 6.3 18 107-124 145-162 (405)
5 d1ctda_ a.39.1.5 (A:) Troponin 3.3 1.1E+02 0.0079 18.2 -0.1 13 262-274 15-27 (34)
6 d1gmua2 d.58.38.1 (A:71-138) U 3.3 1.3E+02 0.0091 20.4 0.2 7 310-316 60-66 (68)
7 d1tl2a_ b.67.1.1 (A:) Tachylec 3.2 1.1E+02 0.0082 25.5 -0.2 12 311-322 93-104 (235)
8 d1axda1 a.45.1.1 (A:81-210) Cl 2.8 1.5E+02 0.011 20.6 0.2 23 90-112 69-95 (129)
9 d1e8ga1 d.58.32.1 (A:274-560) 2.8 1.3E+02 0.0094 24.4 -0.4 10 310-319 260-269 (287)
10 d1pj5a1 b.44.2.1 (A:743-830) N 2.5 2E+02 0.015 19.5 0.6 7 311-317 78-84 (88)
No 1
>d1knya2 d.218.1.1 (A:1-125) Kanamycin nucleotidyltransferase (KNTase), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=6.72 E-value=46 Score=24.98 Aligned_cols=13 Identities=23% Similarity=0.452 Sum_probs=10.4
Q ss_pred CCCCcchhhhHHH
Q 020244 311 PFEPEGLLRFIIQ 323 (329)
Q Consensus 311 ~fDPEGlLstlpa 323 (329)
-|||||+++.|=-
T Consensus 109 LyD~~g~~~~lk~ 121 (125)
T d1knya2 109 IYDSGGYLEKVYQ 121 (125)
T ss_dssp EEESSSHHHHHHH
T ss_pred eecCcchHHHHHH
Confidence 5899999987743
No 2
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=3.90 E-value=6e+02 Score=17.26 Aligned_cols=23 Identities=9% Similarity=0.111 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHhhhccCCh
Q 020244 104 VMPFFLFIVGVAIALALKKVPKI 126 (329)
Q Consensus 104 vfP~FlFi~Gvsi~ls~~r~~~k 126 (329)
+..+|+++.|+.+....+.+.+|
T Consensus 36 ~~~I~~~V~~~l~~~~~~~r~~~ 58 (100)
T d3dtub2 36 IAAITIFVTLLILYAVWRFHEKR 58 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHBTTT
T ss_pred HHHHHHHHHHHHHHHhhhhhccC
Confidence 44567777787777777654433
No 3
>d2axla1 a.4.5.43 (A:1-144) Werner syndrome ATP-dependent helicase WRN {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.74 E-value=2e+02 Score=21.43 Aligned_cols=36 Identities=14% Similarity=0.025 Sum_probs=24.3
Q ss_pred cccccchhchhhhHHhHhhhccCchhhHHHHHHHHH
Q 020244 38 ERSEVQDEQKGELQLQQLLQQKSKRVATLDAFRGLT 73 (329)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~Rl~sLD~lRGla 73 (329)
.+.++-.|+.-.++.......+-..-.-+|+|||-.
T Consensus 7 ~~~D~T~eA~~iLs~V~~~~~rfg~~~iidiL~Gs~ 42 (144)
T d2axla1 7 TSWDFGPQAFKLLSAVDILGEKFGIGLPILFLRGSN 42 (144)
T ss_dssp SEEECHHHHHHHHHHHHHTTTCSCSHHHHHHHTCCS
T ss_pred cceehHHHHHHHHHHHHHhcccccchHHHHHHHhcc
Confidence 345555566666676666666666778899999843
No 4
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=3.38 E-value=8.6e+02 Score=20.38 Aligned_cols=18 Identities=33% Similarity=0.667 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHhhhccC
Q 020244 107 FFLFIVGVAIALALKKVP 124 (329)
Q Consensus 107 ~FlFi~Gvsi~ls~~r~~ 124 (329)
.|..++|+++....++..
T Consensus 145 ~fail~Gial~~~~~~~~ 162 (405)
T d2nwwa1 145 FFAIILGIAITYLMNSEN 162 (405)
T ss_dssp HHHHHHHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHhcccch
Confidence 477888888877665433
No 5
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=3.33 E-value=1.1e+02 Score=18.15 Aligned_cols=13 Identities=54% Similarity=0.693 Sum_probs=10.5
Q ss_pred cchhhhhhhhhcc
Q 020244 262 CNAVGYVDRELWG 274 (329)
Q Consensus 262 ~N~ag~IDR~iLG 274 (329)
.|+-|||||.=|+
T Consensus 15 kNaDGyiD~eEl~ 27 (34)
T d1ctda_ 15 KNADGYIDIEELG 27 (34)
T ss_dssp CSSSSCBCHHHHH
T ss_pred cCCcccccHHHHH
Confidence 4889999998764
No 6
>d1gmua2 d.58.38.1 (A:71-138) Urease metallochaperone UreE, C-terminal domain {Klebsiella aerogenes [TaxId: 28451]}
Probab=3.30 E-value=1.3e+02 Score=20.44 Aligned_cols=7 Identities=71% Similarity=1.364 Sum_probs=5.8
Q ss_pred CCCCCcc
Q 020244 310 APFEPEG 316 (329)
Q Consensus 310 ~~fDPEG 316 (329)
.||+|||
T Consensus 60 ~pF~PE~ 66 (68)
T d1gmua2 60 LPFEPEA 66 (68)
T ss_dssp EECCCCS
T ss_pred ecCCCCC
Confidence 5799996
No 7
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=3.21 E-value=1.1e+02 Score=25.55 Aligned_cols=12 Identities=33% Similarity=0.617 Sum_probs=9.1
Q ss_pred CCCCcchhhhHH
Q 020244 311 PFEPEGLLRFII 322 (329)
Q Consensus 311 ~fDPEGlLstlp 322 (329)
-|||+|+|-.++
T Consensus 93 ffdP~G~LyaVt 104 (235)
T d1tl2a_ 93 FFDPNGYLYAVS 104 (235)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCceEEEec
Confidence 579999986543
No 8
>d1axda1 a.45.1.1 (A:81-210) Class phi GST {Maize (Zea mays), type I [TaxId: 4577]}
Probab=2.79 E-value=1.5e+02 Score=20.57 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=14.5
Q ss_pred ccccCC---CchhHHHH-HHHHHHHHH
Q 020244 90 IDHSPW---NGCTLADF-VMPFFLFIV 112 (329)
Q Consensus 90 l~ha~W---~G~t~aDl-vfP~FlFi~ 112 (329)
+.+.+| +.+|++|+ ++|.+..+.
T Consensus 69 L~~~~~l~Gd~~TlADi~~~~~~~~~~ 95 (129)
T d1axda1 69 LTKCKYLAGDFLSLADLNHVSVTLCLF 95 (129)
T ss_dssp HHHCSSSSSSSCCHHHHTTHHHHHHHT
T ss_pred HccccccccCccccccHHHHHHHHHHH
Confidence 334455 45899999 466666554
No 9
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=2.75 E-value=1.3e+02 Score=24.45 Aligned_cols=10 Identities=20% Similarity=0.763 Sum_probs=8.3
Q ss_pred CCCCCcchhh
Q 020244 310 APFEPEGLLR 319 (329)
Q Consensus 310 ~~fDPEGlLs 319 (329)
..|||.|||+
T Consensus 260 ~a~DP~gIlN 269 (287)
T d1e8ga1 260 NAVDPNGIIA 269 (287)
T ss_dssp HHHCTTCCBC
T ss_pred HHhCCCcCCC
Confidence 3689999986
No 10
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase, C-terminal domain {Arthrobacter globiformis [TaxId: 1665]}
Probab=2.52 E-value=2e+02 Score=19.53 Aligned_cols=7 Identities=14% Similarity=0.453 Sum_probs=5.6
Q ss_pred CCCCcch
Q 020244 311 PFEPEGL 317 (329)
Q Consensus 311 ~fDPEGl 317 (329)
.||||+-
T Consensus 78 ~yDP~~~ 84 (88)
T d1pj5a1 78 LYDPKMT 84 (88)
T ss_dssp SSCTTCT
T ss_pred CCCCCCc
Confidence 5899984
Done!