Query 020245
Match_columns 329
No_of_seqs 181 out of 2122
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 13:59:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 3.9E-50 1.3E-54 343.1 30.2 279 16-329 10-292 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 5.1E-48 1.7E-52 329.2 33.9 267 26-328 11-280 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 3E-47 1E-51 325.0 34.2 261 30-329 11-277 (306)
4 2vpj_A Kelch-like protein 12; 100.0 2.9E-47 9.8E-52 324.4 32.6 268 28-329 12-283 (301)
5 2uvk_A YJHT; unknown function, 100.0 1.6E-47 5.5E-52 333.6 29.7 289 15-328 4-346 (357)
6 3ii7_A Kelch-like protein 7; p 100.0 9E-46 3.1E-50 315.8 32.7 260 3-297 31-295 (306)
7 2xn4_A Kelch-like protein 2; s 100.0 1.3E-45 4.5E-50 314.2 33.6 261 3-298 37-301 (302)
8 1zgk_A Kelch-like ECH-associat 100.0 1.1E-45 3.8E-50 315.5 31.9 259 3-294 46-307 (308)
9 4asc_A Kelch repeat and BTB do 100.0 2.2E-46 7.4E-51 320.9 26.9 279 3-307 20-306 (315)
10 2woz_A Kelch repeat and BTB do 100.0 2.6E-45 9E-50 314.6 29.9 269 19-329 7-292 (318)
11 2vpj_A Kelch-like protein 12; 100.0 8.4E-45 2.9E-49 309.1 32.4 259 3-296 38-300 (301)
12 4asc_A Kelch repeat and BTB do 100.0 6.7E-46 2.3E-50 317.9 25.6 261 30-329 4-282 (315)
13 2woz_A Kelch repeat and BTB do 100.0 4.1E-45 1.4E-49 313.4 28.3 277 3-305 31-314 (318)
14 2zwa_A Leucine carboxyl methyl 100.0 3.1E-40 1.1E-44 309.4 31.1 287 16-324 384-694 (695)
15 2uvk_A YJHT; unknown function, 100.0 1.9E-39 6.7E-44 282.6 27.5 250 5-274 42-350 (357)
16 1k3i_A Galactose oxidase precu 100.0 2.2E-36 7.6E-41 283.0 21.7 298 3-328 173-501 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 1.3E-35 4.4E-40 278.2 26.0 235 69-328 385-639 (695)
18 1k3i_A Galactose oxidase precu 100.0 2E-34 6.7E-39 269.8 23.7 294 3-323 226-548 (656)
19 3dsm_A Uncharacterized protein 98.6 0.00019 6.6E-09 60.8 28.8 248 20-324 43-302 (328)
20 3mbr_X Glutamine cyclotransfer 98.5 0.00017 6E-09 57.7 24.7 189 24-241 24-224 (243)
21 3nol_A Glutamine cyclotransfer 98.4 0.00053 1.8E-08 55.5 23.9 203 6-241 29-245 (262)
22 3dsm_A Uncharacterized protein 98.4 0.00089 3E-08 56.7 28.0 235 48-327 17-256 (328)
23 2iwa_A Glutamine cyclotransfer 98.0 0.0033 1.1E-07 51.3 24.9 216 6-267 7-238 (266)
24 3bws_A Protein LP49; two-domai 98.0 0.0029 9.7E-08 55.4 23.9 195 30-269 133-337 (433)
25 3mbr_X Glutamine cyclotransfer 98.0 0.003 1E-07 50.6 24.4 200 73-308 21-225 (243)
26 3nok_A Glutaminyl cyclase; bet 98.0 0.0018 6.1E-08 52.4 19.2 158 24-214 58-217 (268)
27 3v9f_A Two-component system se 98.0 0.00094 3.2E-08 63.6 20.6 196 30-274 417-619 (781)
28 3nol_A Glutamine cyclotransfer 98.0 0.0046 1.6E-07 50.0 21.2 195 76-308 46-246 (262)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0076 2.6E-07 51.7 28.5 228 25-325 48-297 (376)
30 1l0q_A Surface layer protein; 97.9 0.0015 5.3E-08 56.2 19.8 185 32-272 3-195 (391)
31 1l0q_A Surface layer protein; 97.9 0.0015 5.1E-08 56.3 19.3 225 32-325 45-276 (391)
32 2z2n_A Virginiamycin B lyase; 97.9 0.0077 2.6E-07 49.5 24.0 228 30-328 67-299 (299)
33 3e5z_A Putative gluconolactona 97.9 0.0082 2.8E-07 49.6 22.3 233 32-329 41-291 (296)
34 4a2l_A BT_4663, two-component 97.8 0.006 2E-07 58.2 23.9 187 48-274 427-622 (795)
35 4ery_A WD repeat-containing pr 97.8 0.0096 3.3E-07 49.5 24.3 233 30-325 34-269 (312)
36 1rwi_B Serine/threonine-protei 97.8 0.0085 2.9E-07 48.6 21.3 228 30-326 34-266 (270)
37 3jrp_A Fusion protein of prote 97.8 0.0067 2.3E-07 51.6 21.1 192 30-267 22-241 (379)
38 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.014 4.9E-07 50.0 30.7 194 23-272 96-304 (376)
39 1gxr_A ESG1, transducin-like e 97.7 0.0097 3.3E-07 49.7 21.2 224 30-322 108-335 (337)
40 1p22_A F-BOX/WD-repeat protein 97.7 0.017 5.7E-07 50.7 23.4 225 28-324 140-365 (435)
41 3nok_A Glutaminyl cyclase; bet 97.7 0.013 4.4E-07 47.4 20.6 192 76-308 58-256 (268)
42 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.024 8.2E-07 49.8 25.9 224 48-325 219-443 (445)
43 4aez_A CDC20, WD repeat-contai 97.7 0.015 5E-07 50.4 21.6 221 48-325 156-381 (401)
44 2xbg_A YCF48-like protein; pho 97.6 0.024 8E-07 47.8 21.6 215 7-274 67-287 (327)
45 1gxr_A ESG1, transducin-like e 97.5 0.027 9.2E-07 46.9 21.3 228 30-325 62-297 (337)
46 3vgz_A Uncharacterized protein 97.5 0.031 1.1E-06 47.0 27.0 241 31-326 53-305 (353)
47 3v9f_A Two-component system se 97.5 0.011 3.9E-07 56.1 20.3 179 30-240 460-645 (781)
48 3bws_A Protein LP49; two-domai 97.5 0.03 1E-06 48.7 21.7 228 49-325 102-335 (433)
49 1p22_A F-BOX/WD-repeat protein 97.5 0.018 6E-07 50.5 20.0 185 29-267 181-366 (435)
50 1k8k_C P40, ARP2/3 complex 41 97.5 0.027 9.4E-07 47.7 20.7 150 30-206 19-172 (372)
51 2ojh_A Uncharacterized protein 97.5 0.023 7.9E-07 46.2 19.2 232 47-327 21-261 (297)
52 3u4y_A Uncharacterized protein 97.5 0.037 1.3E-06 46.2 21.2 191 30-269 9-210 (331)
53 2qc5_A Streptogramin B lactona 97.4 0.035 1.2E-06 45.4 23.4 223 30-323 72-299 (300)
54 1q7f_A NHL, brain tumor CG1071 97.4 0.036 1.2E-06 45.3 29.5 235 30-324 40-280 (286)
55 3ow8_A WD repeat-containing pr 97.4 0.043 1.5E-06 45.9 22.3 228 31-324 48-279 (321)
56 2xbg_A YCF48-like protein; pho 97.4 0.047 1.6E-06 46.0 25.7 240 5-306 24-268 (327)
57 3hfq_A Uncharacterized protein 97.4 0.019 6.5E-07 48.4 18.2 163 30-214 50-227 (347)
58 1ri6_A Putative isomerase YBHE 97.4 0.047 1.6E-06 45.6 20.2 143 48-212 60-216 (343)
59 2iwa_A Glutamine cyclotransfer 97.3 0.048 1.7E-06 44.3 24.9 206 76-324 24-237 (266)
60 2qc5_A Streptogramin B lactona 97.3 0.05 1.7E-06 44.5 24.4 191 30-273 30-224 (300)
61 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.076 2.6E-06 46.3 23.3 228 48-326 159-389 (415)
62 1qhu_A Protein (hemopexin); be 97.3 0.069 2.4E-06 47.0 20.7 184 30-267 158-386 (460)
63 4ery_A WD repeat-containing pr 97.3 0.057 1.9E-06 44.7 23.5 190 30-268 76-270 (312)
64 2z2n_A Virginiamycin B lyase; 97.3 0.057 2E-06 44.1 25.2 191 30-273 25-219 (299)
65 4a2l_A BT_4663, two-component 97.2 0.029 1E-06 53.4 19.5 177 30-240 462-648 (795)
66 1qhu_A Protein (hemopexin); be 97.2 0.071 2.4E-06 46.9 20.0 189 25-266 101-331 (460)
67 1k8k_C P40, ARP2/3 complex 41 97.2 0.078 2.7E-06 44.8 20.8 196 30-274 63-284 (372)
68 2aq5_A Coronin-1A; WD40 repeat 97.2 0.074 2.5E-06 45.9 20.1 155 82-267 93-255 (402)
69 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.1 3.6E-06 45.6 26.4 212 48-325 179-392 (445)
70 1r5m_A SIR4-interacting protei 97.2 0.1 3.4E-06 44.9 20.9 228 30-324 119-361 (425)
71 3mkq_A Coatomer beta'-subunit; 97.1 0.16 5.5E-06 48.2 23.5 229 30-324 24-259 (814)
72 2hqs_A Protein TOLB; TOLB, PAL 97.1 0.074 2.5E-06 46.3 19.2 189 48-274 203-395 (415)
73 3jro_A Fusion protein of prote 97.1 0.055 1.9E-06 51.2 19.2 107 30-159 20-133 (753)
74 2vdu_B TRNA (guanine-N(7)-)-me 97.0 0.14 4.9E-06 44.9 21.5 150 32-211 116-275 (450)
75 3zwl_B Eukaryotic translation 97.0 0.12 4E-06 43.5 21.1 196 30-269 43-252 (369)
76 1kb0_A Quinohemoprotein alcoho 97.0 0.21 7.2E-06 46.6 22.5 128 24-166 71-209 (677)
77 3ow8_A WD repeat-containing pr 97.0 0.12 4E-06 43.3 24.4 215 48-322 102-319 (321)
78 3vl1_A 26S proteasome regulato 97.0 0.058 2E-06 46.6 17.5 107 82-211 108-216 (420)
79 2dg1_A DRP35, lactonase; beta 97.0 0.13 4.3E-06 43.0 19.2 208 30-274 55-271 (333)
80 1r5m_A SIR4-interacting protei 96.9 0.16 5.4E-06 43.6 21.5 146 82-268 217-363 (425)
81 1got_B GT-beta; complex (GTP-b 96.9 0.14 4.9E-06 43.0 20.6 136 99-267 164-302 (340)
82 3hfq_A Uncharacterized protein 96.9 0.11 3.8E-06 43.6 18.5 149 49-213 19-178 (347)
83 1jmx_B Amine dehydrogenase; ox 96.9 0.15 5E-06 42.6 21.1 157 30-212 10-180 (349)
84 2bkl_A Prolyl endopeptidase; m 96.9 0.27 9.2E-06 46.0 22.0 215 30-273 131-358 (695)
85 3vgz_A Uncharacterized protein 96.9 0.16 5.4E-06 42.5 27.5 196 31-271 101-308 (353)
86 4gqb_B Methylosome protein 50; 96.9 0.14 4.6E-06 43.4 18.3 220 48-324 103-331 (344)
87 4aow_A Guanine nucleotide-bind 96.8 0.17 5.7E-06 42.1 21.2 150 135-325 186-338 (340)
88 4g56_B MGC81050 protein; prote 96.8 0.02 6.9E-07 48.8 12.7 106 133-268 150-260 (357)
89 3fm0_A Protein CIAO1; WDR39,SG 96.8 0.13 4.4E-06 43.4 17.7 157 30-214 27-188 (345)
90 4aez_A CDC20, WD repeat-contai 96.8 0.22 7.4E-06 42.9 21.0 177 48-269 113-296 (401)
91 3g4e_A Regucalcin; six bladed 96.8 0.17 5.9E-06 41.6 18.7 231 23-308 15-263 (297)
92 3zwl_B Eukaryotic translation 96.8 0.19 6.6E-06 42.1 19.9 68 133-213 186-255 (369)
93 4gqb_B Methylosome protein 50; 96.8 0.063 2.1E-06 45.5 15.4 105 133-267 138-247 (344)
94 1rwi_B Serine/threonine-protei 96.7 0.14 4.8E-06 41.2 17.0 185 30-267 77-265 (270)
95 1pjx_A Dfpase, DIISOPROPYLFLUO 96.7 0.19 6.3E-06 41.4 22.0 249 30-326 28-301 (314)
96 3jrp_A Fusion protein of prote 96.7 0.18 6.1E-06 42.5 18.2 107 83-208 23-135 (379)
97 3ott_A Two-component system se 96.7 0.4 1.4E-05 45.3 21.6 188 48-273 392-593 (758)
98 4g56_B MGC81050 protein; prote 96.6 0.14 4.7E-06 43.5 16.8 186 82-324 150-343 (357)
99 1vyh_C Platelet-activating fac 96.6 0.3 1E-05 42.3 21.0 147 30-211 119-269 (410)
100 1got_B GT-beta; complex (GTP-b 96.6 0.25 8.6E-06 41.4 24.3 188 30-268 66-259 (340)
101 3fm0_A Protein CIAO1; WDR39,SG 96.6 0.13 4.6E-06 43.3 16.5 185 82-309 27-216 (345)
102 3fvz_A Peptidyl-glycine alpha- 96.6 0.25 8.6E-06 41.3 28.3 239 48-325 69-323 (329)
103 1ri6_A Putative isomerase YBHE 96.6 0.24 8.3E-06 41.1 19.5 142 48-212 15-166 (343)
104 3vl1_A 26S proteasome regulato 96.6 0.32 1.1E-05 41.8 22.9 189 30-267 108-323 (420)
105 2ynn_A Coatomer subunit beta'; 96.4 0.3 1E-05 40.2 22.7 146 30-208 24-173 (304)
106 1q7f_A NHL, brain tumor CG1071 96.4 0.28 9.6E-06 39.8 22.4 176 30-239 88-268 (286)
107 2aq5_A Coronin-1A; WD40 repeat 96.4 0.097 3.3E-06 45.1 14.6 110 84-209 145-256 (402)
108 3scy_A Hypothetical bacterial 96.4 0.38 1.3E-05 40.5 21.9 29 183-215 221-250 (361)
109 3dwl_C Actin-related protein 2 96.3 0.021 7.3E-07 48.7 9.8 150 30-207 22-177 (377)
110 2pm9_A Protein WEB1, protein t 96.3 0.39 1.3E-05 41.2 17.7 239 30-325 78-338 (416)
111 2ojh_A Uncharacterized protein 96.2 0.36 1.2E-05 38.8 18.4 149 96-274 19-170 (297)
112 3e5z_A Putative gluconolactona 96.2 0.4 1.4E-05 39.2 18.5 195 30-270 79-290 (296)
113 1pby_B Quinohemoprotein amine 96.2 0.42 1.4E-05 39.5 20.0 143 48-212 11-168 (337)
114 2fp8_A Strictosidine synthase; 96.2 0.44 1.5E-05 39.6 20.8 236 48-325 40-314 (322)
115 2xdw_A Prolyl endopeptidase; a 96.1 0.87 3E-05 42.6 25.3 215 30-273 135-376 (710)
116 3v7d_B Cell division control p 96.1 0.61 2.1E-05 40.8 26.6 145 132-326 278-423 (464)
117 1vyh_C Platelet-activating fac 96.1 0.58 2E-05 40.5 20.3 67 82-162 203-269 (410)
118 3azo_A Aminopeptidase; POP fam 96.1 0.32 1.1E-05 45.0 17.4 241 48-326 102-371 (662)
119 4e54_B DNA damage-binding prot 96.1 0.24 8.1E-06 43.3 15.7 149 31-209 177-329 (435)
120 3k26_A Polycomb protein EED; W 96.1 0.5 1.7E-05 39.5 18.9 141 48-208 44-193 (366)
121 3mkq_A Coatomer beta'-subunit; 96.1 0.67 2.3E-05 43.8 19.8 186 30-268 66-261 (814)
122 3v7d_B Cell division control p 96.1 0.65 2.2E-05 40.6 25.5 149 81-271 278-426 (464)
123 1sq9_A Antiviral protein SKI8; 96.1 0.56 1.9E-05 39.9 24.5 201 29-268 24-269 (397)
124 3jro_A Fusion protein of prote 96.1 0.27 9.3E-06 46.5 16.8 106 83-208 21-133 (753)
125 3ei3_B DNA damage-binding prot 96.1 0.39 1.3E-05 40.8 16.5 145 84-266 87-236 (383)
126 2ad6_A Methanol dehydrogenase 96.0 0.86 2.9E-05 41.5 23.6 128 24-166 56-195 (571)
127 4e54_B DNA damage-binding prot 96.0 0.28 9.7E-06 42.7 15.6 107 83-208 132-241 (435)
128 1nir_A Nitrite reductase; hemo 95.9 0.9 3.1E-05 41.1 19.1 197 99-326 248-460 (543)
129 3g4e_A Regucalcin; six bladed 95.9 0.55 1.9E-05 38.5 17.6 145 82-264 24-178 (297)
130 4a11_B DNA excision repair pro 95.9 0.41 1.4E-05 40.7 16.1 151 30-210 111-279 (408)
131 2pm9_A Protein WEB1, protein t 95.9 0.24 8.3E-06 42.5 14.6 142 48-212 45-202 (416)
132 1pgu_A Actin interacting prote 95.9 0.76 2.6E-05 41.7 18.4 149 136-324 175-328 (615)
133 3sfz_A APAF-1, apoptotic pepti 95.8 1 3.5E-05 45.0 20.6 146 30-210 626-777 (1249)
134 2z3z_A Dipeptidyl aminopeptida 95.8 1.2 4.2E-05 41.4 21.8 195 98-325 234-436 (706)
135 3odt_A Protein DOA1; ubiquitin 95.7 0.65 2.2E-05 37.8 20.2 186 29-268 27-216 (313)
136 1nir_A Nitrite reductase; hemo 95.7 1.1 3.8E-05 40.5 21.0 194 29-271 147-360 (543)
137 3bg1_A Protein SEC13 homolog; 95.7 0.72 2.5E-05 38.1 17.1 113 30-165 24-144 (316)
138 1yr2_A Prolyl oligopeptidase; 95.6 1.5 5.1E-05 41.3 20.9 214 30-273 173-402 (741)
139 3no2_A Uncharacterized protein 95.6 0.75 2.6E-05 37.4 18.6 182 82-323 4-194 (276)
140 3odt_A Protein DOA1; ubiquitin 95.6 0.76 2.6E-05 37.4 21.2 189 79-328 110-300 (313)
141 2ecf_A Dipeptidyl peptidase IV 95.5 1.6 5.4E-05 40.9 22.2 119 30-167 47-190 (741)
142 3mmy_A MRNA export factor; mRN 95.5 0.89 3E-05 37.9 18.4 144 31-209 54-201 (368)
143 3dwl_C Actin-related protein 2 95.5 0.052 1.8E-06 46.2 8.6 109 82-209 22-133 (377)
144 3no2_A Uncharacterized protein 95.5 0.79 2.7E-05 37.3 22.8 218 30-305 4-230 (276)
145 1pex_A Collagenase-3, MMP-13; 95.5 0.66 2.3E-05 36.0 17.9 156 23-212 26-197 (207)
146 1pgu_A Actin interacting prote 95.4 1.5 5E-05 39.8 20.2 195 29-269 28-241 (615)
147 3dr2_A Exported gluconolactona 95.4 0.91 3.1E-05 37.3 19.8 202 31-274 57-275 (305)
148 2hes_X YDR267CP; beta-propelle 95.4 0.99 3.4E-05 37.6 19.4 196 82-324 118-328 (330)
149 1itv_A MMP9; adaptive molecula 95.4 0.68 2.3E-05 35.6 14.3 155 23-211 9-178 (195)
150 4gga_A P55CDC, cell division c 95.3 1.3 4.3E-05 38.3 20.4 135 48-208 125-262 (420)
151 2dg1_A DRP35, lactonase; beta 95.3 1 3.5E-05 37.3 17.3 153 82-266 55-213 (333)
152 3c5m_A Oligogalacturonate lyas 95.3 1.2 3.9E-05 37.8 17.4 201 48-273 168-391 (396)
153 3i2n_A WD repeat-containing pr 95.3 1.1 3.7E-05 37.2 18.7 190 32-267 32-244 (357)
154 2xdw_A Prolyl endopeptidase; a 95.2 2.1 7E-05 40.0 21.5 256 29-323 82-367 (710)
155 1w6s_A Methanol dehydrogenase 95.2 1.9 6.4E-05 39.6 20.8 129 24-167 56-202 (599)
156 1pex_A Collagenase-3, MMP-13; 95.2 0.83 2.8E-05 35.4 16.9 152 77-269 28-195 (207)
157 3scy_A Hypothetical bacterial 95.1 1.2 4.2E-05 37.3 19.4 116 32-159 14-130 (361)
158 3azo_A Aminopeptidase; POP fam 95.1 1.5 5E-05 40.5 17.6 198 48-274 161-377 (662)
159 1yfq_A Cell cycle arrest prote 95.0 1.2 4.3E-05 36.7 22.0 145 30-207 22-179 (342)
160 3ei3_B DNA damage-binding prot 95.0 1.4 4.8E-05 37.3 18.7 146 32-207 87-236 (383)
161 3b7f_A Glycosyl hydrolase, BNR 95.0 1.5 5.2E-05 37.6 24.3 206 6-239 43-297 (394)
162 1sq9_A Antiviral protein SKI8; 95.0 1.4 4.9E-05 37.3 20.6 70 133-210 197-270 (397)
163 4h5i_A Guanine nucleotide-exch 95.0 1.5 5E-05 37.2 25.9 155 132-325 143-301 (365)
164 1qks_A Cytochrome CD1 nitrite 94.9 2.1 7.3E-05 38.9 21.6 191 30-269 166-376 (567)
165 3k26_A Polycomb protein EED; W 94.9 1.4 4.8E-05 36.6 23.0 104 31-159 85-193 (366)
166 2hes_X YDR267CP; beta-propelle 94.9 1.4 4.8E-05 36.6 21.1 158 29-214 23-191 (330)
167 2ghs_A AGR_C_1268P; regucalcin 94.9 1.4 4.9E-05 36.6 22.3 145 31-206 61-209 (326)
168 4gga_A P55CDC, cell division c 94.9 1.7 5.8E-05 37.5 21.6 212 48-309 169-386 (420)
169 3u4y_A Uncharacterized protein 94.8 1.4 4.7E-05 36.3 18.8 111 82-213 9-123 (331)
170 2bkl_A Prolyl endopeptidase; m 94.7 2.7 9.2E-05 39.2 21.2 221 29-274 78-315 (695)
171 3pe7_A Oligogalacturonate lyas 94.7 1.7 5.7E-05 36.8 21.4 112 97-215 166-281 (388)
172 3hrp_A Uncharacterized protein 94.7 1.9 6.4E-05 37.4 26.4 245 30-322 141-408 (409)
173 1erj_A Transcriptional repress 94.7 1.8 6.1E-05 37.0 21.0 147 30-207 134-287 (393)
174 3pe7_A Oligogalacturonate lyas 94.7 1.5 5E-05 37.1 15.6 159 48-215 168-337 (388)
175 3iz6_a 40S ribosomal protein R 94.7 1.8 6.1E-05 36.8 21.3 185 99-325 180-376 (380)
176 1pby_B Quinohemoprotein amine 94.7 1.5 5.2E-05 36.0 21.4 116 30-165 44-170 (337)
177 2ynn_A Coatomer subunit beta'; 94.6 1.5 5.2E-05 35.9 20.2 188 30-269 66-262 (304)
178 2z3z_A Dipeptidyl aminopeptida 94.6 2.8 9.7E-05 38.9 21.7 112 149-274 235-352 (706)
179 1itv_A MMP9; adaptive molecula 94.6 1.1 3.9E-05 34.3 15.8 151 77-268 11-176 (195)
180 1gen_A Gelatinase A; hydrolase 94.6 1.3 4.3E-05 34.7 16.1 153 23-209 33-204 (218)
181 3dr2_A Exported gluconolactona 94.6 1.6 5.4E-05 35.8 15.9 166 30-214 96-274 (305)
182 3dm0_A Maltose-binding peripla 94.5 3 0.0001 38.8 21.6 147 30-209 441-594 (694)
183 2ecf_A Dipeptidyl peptidase IV 94.5 3.1 0.0001 38.9 18.9 109 150-273 264-375 (741)
184 3i2n_A WD repeat-containing pr 94.5 1.7 5.9E-05 36.0 17.8 105 82-207 128-243 (357)
185 2pbi_B Guanine nucleotide-bind 94.5 1.9 6.5E-05 36.2 25.0 192 30-269 75-274 (354)
186 4ggc_A P55CDC, cell division c 94.4 1.7 5.9E-05 35.3 19.1 94 48-159 89-182 (318)
187 2ymu_A WD-40 repeat protein; u 94.3 2.8 9.7E-05 37.6 19.1 174 82-309 396-571 (577)
188 3fvz_A Peptidyl-glycine alpha- 94.3 2 6.7E-05 35.7 23.1 203 30-266 101-322 (329)
189 1qks_A Cytochrome CD1 nitrite 94.3 3 0.0001 37.9 20.3 206 83-325 256-478 (567)
190 3dm0_A Maltose-binding peripla 94.3 3.4 0.00012 38.4 20.7 149 82-268 441-594 (694)
191 3ba0_A Macrophage metalloelast 94.3 2.1 7.2E-05 36.4 15.0 156 23-212 183-355 (365)
192 2xyi_A Probable histone-bindin 94.2 1.1 3.7E-05 38.9 13.8 61 133-207 243-309 (430)
193 4a11_B DNA excision repair pro 94.1 2.3 8E-05 35.9 20.5 150 30-208 55-219 (408)
194 1jmx_B Amine dehydrogenase; ox 94.1 0.73 2.5E-05 38.2 12.0 69 132-212 9-79 (349)
195 3b7f_A Glycosyl hydrolase, BNR 94.0 2.6 8.9E-05 36.1 22.4 193 49-274 32-270 (394)
196 3sfz_A APAF-1, apoptotic pepti 94.0 5.6 0.00019 39.7 23.8 182 48-269 679-874 (1249)
197 3iz6_a 40S ribosomal protein R 93.9 2.6 8.9E-05 35.8 22.9 193 30-269 77-283 (380)
198 3ott_A Two-component system se 93.9 4.4 0.00015 38.1 25.4 189 30-273 73-267 (758)
199 1su3_A Interstitial collagenas 93.7 3.3 0.00011 36.4 15.4 154 77-271 267-437 (450)
200 3iuj_A Prolyl endopeptidase; h 93.6 4.6 0.00016 37.6 25.4 237 48-326 155-407 (693)
201 1su3_A Interstitial collagenas 93.6 3.6 0.00012 36.1 18.2 156 23-212 265-437 (450)
202 3lrv_A PRE-mRNA-splicing facto 93.4 3 0.0001 34.7 20.5 151 30-210 47-204 (343)
203 2xyi_A Probable histone-bindin 93.3 2.8 9.6E-05 36.3 14.7 142 136-324 196-353 (430)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 93.3 2.8 9.6E-05 34.1 17.8 194 31-267 83-300 (314)
205 2pm7_B Protein transport prote 93.2 2.9 9.9E-05 34.0 20.5 107 30-159 20-133 (297)
206 4aow_A Guanine nucleotide-bind 93.1 3.1 0.00011 34.1 20.1 189 31-268 51-248 (340)
207 2ghs_A AGR_C_1268P; regucalcin 92.8 3.6 0.00012 34.1 19.0 111 83-213 61-174 (326)
208 1n7d_A LDL receptor, low-densi 92.8 3.8 0.00013 38.3 15.4 217 48-323 386-613 (699)
209 1hxn_A Hemopexin, HPX; heme, b 92.8 2.8 9.5E-05 32.8 13.0 142 29-207 27-197 (219)
210 1n7d_A LDL receptor, low-densi 92.8 3.8 0.00013 38.3 15.4 150 81-268 463-616 (699)
211 1npe_A Nidogen, entactin; glyc 92.7 3.1 0.00011 33.2 25.0 196 24-269 39-241 (267)
212 1yiq_A Quinohemoprotein alcoho 92.7 6.4 0.00022 36.7 26.0 127 24-165 64-201 (689)
213 3c5m_A Oligogalacturonate lyas 92.7 4.1 0.00014 34.3 15.6 165 97-274 166-337 (396)
214 3bg1_A Protein SEC13 homolog; 92.6 3.7 0.00013 33.7 14.4 58 48-114 81-143 (316)
215 2ad6_A Methanol dehydrogenase 92.5 6 0.00021 35.9 19.7 80 25-114 110-193 (571)
216 2vdu_B TRNA (guanine-N(7)-)-me 92.3 5.1 0.00018 34.8 19.4 164 83-271 210-398 (450)
217 3frx_A Guanine nucleotide-bind 92.2 4.2 0.00014 33.4 23.2 143 30-209 76-229 (319)
218 1erj_A Transcriptional repress 92.1 5.1 0.00017 34.1 18.1 104 133-268 134-240 (393)
219 2fp8_A Strictosidine synthase; 92.0 4.5 0.00015 33.3 20.0 205 24-267 83-314 (322)
220 3c7x_A Matrix metalloproteinas 91.9 3.3 0.00011 31.7 12.0 105 30-160 61-177 (196)
221 1kb0_A Quinohemoprotein alcoho 91.8 8.1 0.00028 35.9 20.3 82 25-115 123-208 (677)
222 2pbi_B Guanine nucleotide-bind 91.7 5.2 0.00018 33.5 23.7 166 99-309 176-348 (354)
223 2p4o_A Hypothetical protein; p 91.7 4.8 0.00016 33.0 22.9 201 18-266 29-242 (306)
224 1yfq_A Cell cycle arrest prote 91.6 4.9 0.00017 33.0 17.0 103 82-206 22-130 (342)
225 2ymu_A WD-40 repeat protein; u 91.6 7.2 0.00025 34.9 21.1 149 82-273 314-464 (577)
226 3o4h_A Acylamino-acid-releasin 91.5 5.7 0.0002 35.8 14.9 99 49-162 133-231 (582)
227 3ju4_A Endo-N-acetylneuraminid 91.4 6.3 0.00021 33.8 20.5 182 57-244 269-484 (670)
228 1gen_A Gelatinase A; hydrolase 91.0 4.6 0.00016 31.5 16.2 152 77-268 35-204 (218)
229 3f3f_A Nucleoporin SEH1; struc 90.8 5.8 0.0002 32.3 24.9 107 30-159 22-144 (351)
230 3c7x_A Matrix metalloproteinas 90.3 4.9 0.00017 30.7 15.2 153 24-209 9-177 (196)
231 3ba0_A Macrophage metalloelast 90.2 7.9 0.00027 32.9 15.3 154 77-271 185-355 (365)
232 2hz6_A Endoplasmic reticulum t 90.1 0.38 1.3E-05 41.1 5.3 140 29-212 8-156 (369)
233 1yr2_A Prolyl oligopeptidase; 90.0 13 0.00043 34.9 18.8 151 97-274 292-449 (741)
234 3hrp_A Uncharacterized protein 89.8 9 0.00031 33.0 21.7 152 82-268 141-300 (409)
235 3m0c_C LDL receptor, low-densi 89.8 14 0.00047 35.1 23.1 174 30-240 435-620 (791)
236 3oyo_A Hemopexin fold protein 89.8 6 0.00021 31.0 15.3 148 29-206 12-197 (225)
237 3p5b_L Low density lipoprotein 89.7 9.1 0.00031 32.9 24.1 204 48-305 92-307 (400)
238 3m0c_C LDL receptor, low-densi 89.0 16 0.00054 34.7 24.9 205 48-306 404-620 (791)
239 3hxj_A Pyrrolo-quinoline quino 88.9 8.4 0.00029 31.4 17.6 96 79-206 104-203 (330)
240 2xzm_R RACK1; ribosome, transl 88.7 9.2 0.00032 31.6 19.5 50 48-109 98-150 (343)
241 1flg_A Protein (quinoprotein e 88.2 15 0.00051 33.4 24.3 124 24-164 62-201 (582)
242 1kv9_A Type II quinohemoprotei 87.9 17 0.00057 33.7 26.4 126 24-165 60-196 (668)
243 1kv9_A Type II quinohemoprotei 87.9 13 0.00045 34.4 14.3 124 76-213 60-195 (668)
244 3hxj_A Pyrrolo-quinoline quino 87.6 10 0.00035 30.9 22.4 177 28-270 105-289 (330)
245 1xfd_A DIP, dipeptidyl aminope 87.6 18 0.0006 33.5 22.0 113 48-167 37-152 (723)
246 1ck7_A Protein (gelatinase A); 87.5 7.9 0.00027 35.5 12.1 153 23-209 446-617 (631)
247 1k32_A Tricorn protease; prote 87.4 23 0.00078 34.7 21.5 237 29-325 212-462 (1045)
248 3o4h_A Acylamino-acid-releasin 87.4 16 0.00055 32.9 18.4 141 98-270 89-231 (582)
249 1hxn_A Hemopexin, HPX; heme, b 87.1 9.2 0.00031 29.8 11.2 103 132-266 27-144 (219)
250 3iuj_A Prolyl endopeptidase; h 86.7 20 0.00068 33.3 15.8 156 98-274 154-325 (693)
251 3oyo_A Hemopexin fold protein 86.7 9.8 0.00034 29.8 13.5 105 132-265 69-197 (225)
252 1ijq_A LDL receptor, low-densi 86.1 13 0.00045 30.6 26.7 196 24-267 33-239 (316)
253 3c75_H MADH, methylamine dehyd 85.9 17 0.00058 31.6 18.0 122 30-163 84-214 (426)
254 4ggc_A P55CDC, cell division c 85.8 12 0.00042 30.0 22.9 135 48-208 45-182 (318)
255 4h5i_A Guanine nucleotide-exch 85.8 15 0.0005 30.9 20.7 183 99-323 157-342 (365)
256 3lp9_A LS-24; SEED albumin, pl 85.2 6.3 0.00022 30.9 9.1 63 133-208 129-202 (227)
257 2pm7_B Protein transport prote 84.9 14 0.00047 29.8 18.7 63 31-109 67-133 (297)
258 1ck7_A Protein (gelatinase A); 84.2 14 0.00049 33.8 12.1 151 77-267 448-616 (631)
259 2xzm_R RACK1; ribosome, transl 83.1 18 0.00063 29.8 21.0 64 82-160 87-151 (343)
260 3mmy_A MRNA export factor; mRN 82.7 19 0.00064 29.5 19.5 105 84-209 55-162 (368)
261 3frx_A Guanine nucleotide-bind 82.3 19 0.00065 29.4 17.0 105 82-210 76-188 (319)
262 3v65_B Low-density lipoprotein 82.2 22 0.00077 30.2 26.8 202 48-305 96-305 (386)
263 3f3f_A Nucleoporin SEH1; struc 81.8 19 0.00065 29.1 18.3 108 82-208 22-144 (351)
264 1npe_A Nidogen, entactin; glyc 80.9 19 0.00064 28.4 21.1 151 30-213 90-244 (267)
265 1yiq_A Quinohemoprotein alcoho 80.5 37 0.0013 31.6 21.7 81 25-114 116-200 (689)
266 3lrv_A PRE-mRNA-splicing facto 79.5 25 0.00084 28.9 16.9 156 30-212 138-299 (343)
267 1ijq_A LDL receptor, low-densi 78.9 25 0.00087 28.8 27.1 181 48-272 10-201 (316)
268 1w6s_A Methanol dehydrogenase 78.4 40 0.0014 30.8 18.7 77 29-115 116-200 (599)
269 3v64_C Agrin; beta propeller, 78.4 28 0.00097 29.0 24.2 174 30-240 84-263 (349)
270 3v65_B Low-density lipoprotein 78.4 30 0.001 29.3 24.5 185 30-264 127-316 (386)
271 1z68_A Fibroblast activation p 77.8 44 0.0015 30.9 14.6 106 48-166 36-147 (719)
272 2mad_H Methylamine dehydrogena 73.9 40 0.0014 28.5 26.4 121 30-164 32-162 (373)
273 1nr0_A Actin interacting prote 73.7 52 0.0018 29.8 20.3 151 133-324 201-355 (611)
274 2gop_A Trilobed protease; beta 73.5 36 0.0012 27.8 18.1 144 47-214 42-214 (347)
275 3gre_A Serine/threonine-protei 69.3 52 0.0018 27.9 16.7 152 30-209 181-361 (437)
276 1nr0_A Actin interacting prote 69.2 66 0.0023 29.1 23.4 183 48-271 170-360 (611)
277 2ece_A 462AA long hypothetical 68.3 62 0.0021 28.4 21.6 125 30-162 95-241 (462)
278 3dw8_B Serine/threonine-protei 68.3 54 0.0019 27.7 20.2 68 133-210 188-261 (447)
279 2p4o_A Hypothetical protein; p 68.0 46 0.0016 26.9 21.0 150 82-266 42-198 (306)
280 3lp9_A LS-24; SEED albumin, pl 67.8 38 0.0013 26.4 8.9 105 29-159 71-202 (227)
281 3v64_C Agrin; beta propeller, 67.7 53 0.0018 27.4 27.5 203 48-306 53-263 (349)
282 2xe4_A Oligopeptidase B; hydro 65.7 89 0.003 29.3 19.1 98 148-264 294-398 (751)
283 3sre_A PON1, serum paraoxonase 65.7 60 0.0021 27.3 13.5 165 30-207 60-252 (355)
284 1xfd_A DIP, dipeptidyl aminope 64.0 89 0.003 28.7 15.8 110 100-215 38-151 (723)
285 4a5s_A Dipeptidyl peptidase 4 63.7 95 0.0032 28.9 20.9 109 48-166 36-149 (740)
286 3p5b_L Low density lipoprotein 61.2 77 0.0026 27.0 26.2 176 30-240 123-308 (400)
287 1k32_A Tricorn protease; prote 61.2 1.3E+02 0.0043 29.5 19.1 150 99-273 317-468 (1045)
288 3ju4_A Endo-N-acetylneuraminid 56.9 96 0.0033 26.8 16.8 124 15-142 278-406 (670)
289 2oiz_A Aromatic amine dehydrog 54.2 94 0.0032 25.8 20.5 121 31-163 16-145 (361)
290 3a0f_A Xyloglucanase; beta-pro 53.9 1.5E+02 0.005 27.9 29.1 211 48-274 43-292 (763)
291 3gre_A Serine/threonine-protei 53.8 1E+02 0.0034 26.0 17.0 68 133-211 181-249 (437)
292 3a0f_A Xyloglucanase; beta-pro 53.1 1.5E+02 0.0051 27.9 24.9 172 31-215 88-292 (763)
293 2gop_A Trilobed protease; beta 51.8 94 0.0032 25.1 18.7 99 98-214 151-258 (347)
294 2xe4_A Oligopeptidase B; hydro 48.4 1.8E+02 0.006 27.3 15.4 99 97-205 293-398 (751)
295 4a0p_A LRP6, LRP-6, low-densit 46.5 1.7E+02 0.006 26.7 21.5 171 30-240 48-225 (628)
296 2mad_H Methylamine dehydrogena 45.2 1.4E+02 0.0047 25.1 21.3 67 183-269 278-353 (373)
297 2p9w_A MAL S 1 allergenic prot 44.5 1.4E+02 0.0047 24.9 19.9 238 31-308 25-305 (334)
298 3tc9_A Hypothetical hydrolase; 43.6 1.6E+02 0.0054 25.3 15.1 134 82-240 149-289 (430)
299 3sre_A PON1, serum paraoxonase 43.5 1.5E+02 0.005 24.9 14.8 148 97-266 81-252 (355)
300 4hvt_A Ritya.17583.B, post-pro 41.8 2.2E+02 0.0076 26.5 11.8 103 97-211 267-385 (711)
301 2p9w_A MAL S 1 allergenic prot 41.3 1.5E+02 0.0053 24.6 14.8 142 82-243 147-306 (334)
302 1z68_A Fibroblast activation p 40.9 2.1E+02 0.0073 26.1 16.3 78 133-214 263-353 (719)
303 2cn3_A Xyloglucanase, beta-1,4 39.8 2.4E+02 0.0081 26.3 24.9 228 6-272 55-343 (737)
304 1sqj_A OXG-RCBH, oligoxylogluc 39.1 2.5E+02 0.0087 26.4 26.6 246 6-273 47-340 (789)
305 1flg_A Protein (quinoprotein e 38.9 2.2E+02 0.0075 25.7 20.6 79 25-113 112-200 (582)
306 4hw6_A Hypothetical protein, I 38.5 1.9E+02 0.0065 24.8 13.2 145 83-265 153-303 (433)
307 1sqj_A OXG-RCBH, oligoxylogluc 38.4 2.6E+02 0.0089 26.4 28.4 241 5-274 3-277 (789)
308 3sjl_D Methylamine dehydrogena 37.3 1.7E+02 0.0058 24.9 8.6 77 82-167 291-372 (386)
309 3c75_H MADH, methylamine dehyd 35.1 2.2E+02 0.0075 24.5 15.2 68 183-269 330-405 (426)
310 4d9s_A UVB-resistance protein 34.7 2.1E+02 0.0072 24.2 14.6 17 22-38 25-42 (406)
311 3sov_A LRP-6, low-density lipo 33.1 2E+02 0.0068 23.4 22.8 188 30-267 46-239 (318)
312 1fwx_A Nitrous oxide reductase 32.3 2.9E+02 0.01 25.1 13.6 83 69-160 82-186 (595)
313 3tc9_A Hypothetical hydrolase; 31.9 2.4E+02 0.0083 24.1 15.3 107 133-272 149-263 (430)
314 3sjl_D Methylamine dehydrogena 30.3 2.5E+02 0.0086 23.8 21.2 123 30-165 44-176 (386)
315 3sov_A LRP-6, low-density lipo 30.0 2.2E+02 0.0076 23.1 19.4 149 30-210 90-241 (318)
316 2b4w_A Hypothetical protein, c 28.3 2.4E+02 0.0081 22.9 7.7 60 79-142 37-98 (315)
317 3kya_A Putative phosphatase; s 26.9 3.3E+02 0.011 24.1 13.4 108 83-206 152-277 (496)
318 2oit_A Nucleoporin 214KDA; NH2 26.0 3.1E+02 0.011 23.4 15.6 60 134-206 162-222 (434)
319 4hvt_A Ritya.17583.B, post-pro 25.9 4.1E+02 0.014 24.8 12.7 150 48-215 269-437 (711)
320 4a0p_A LRP6, LRP-6, low-densit 24.9 4E+02 0.014 24.3 24.8 175 48-267 15-198 (628)
321 2oaj_A Protein SNI1; WD40 repe 24.5 4.7E+02 0.016 25.0 21.2 150 30-211 28-186 (902)
322 3vu4_A KMHSV2; beta-propeller 23.8 3E+02 0.01 22.4 18.9 179 82-326 30-229 (355)
323 2oaj_A Protein SNI1; WD40 repe 23.0 5E+02 0.017 24.8 19.9 104 82-210 28-132 (902)
324 1jof_A Carboxy-CIS,CIS-muconat 21.6 3.3E+02 0.011 22.2 20.4 16 198-213 167-183 (365)
325 3ei3_A DNA damage-binding prot 20.2 6.5E+02 0.022 25.1 15.2 164 49-234 808-981 (1158)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.9e-50 Score=343.08 Aligned_cols=279 Identities=23% Similarity=0.351 Sum_probs=240.0
Q ss_pred CCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEcccc---
Q 020245 16 SGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRD--- 92 (329)
Q Consensus 16 ~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--- 92 (329)
..|.+|..++++.++++||++||.. ....+++++||+.+++|+.++. +|.+|.+|++++++++||++||..
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~~---~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~ 83 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGYF---RQSLSYLEAYNPSNGTWLRLAD---LQVPRSGLAGCVVGGLLYAVGGRNNSP 83 (308)
T ss_dssp -----------CCCCCCEEEECCBS---SSBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCEEEET
T ss_pred cCCeeeCCccccCCCCEEEEEeCcC---CCCcceEEEEcCCCCeEeECCC---CCcccccceEEEECCEEEEECCCcCCC
Confidence 4577899999999999999999982 3345899999999999999865 778999999999999999999983
Q ss_pred CCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCC
Q 020245 93 GTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCK 172 (329)
Q Consensus 93 ~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 172 (329)
......+++++||+.+++|++++++ |.+|..|+++.++++||++||......++++++||+.+++|+.++++ |.
T Consensus 84 ~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~ 157 (308)
T 1zgk_A 84 DGNTDSSALDCYNPMTNQWSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM---LT 157 (308)
T ss_dssp TEEEECCCEEEEETTTTEEEECCCC---SSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCC---SS
T ss_pred CCCeecceEEEECCCCCeEeECCCC---CcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCC---Cc
Confidence 2456778999999999999999887 78999999999999999999988777789999999999999999987 68
Q ss_pred CCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCC
Q 020245 173 GRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLG 251 (329)
Q Consensus 173 ~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~ 251 (329)
+|..|+++.++++||++||..+. ..+++++||+.+++|+.+. .+|.+|..|+++.++++|||+||....
T Consensus 158 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~------- 227 (308)
T 1zgk_A 158 RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQ------- 227 (308)
T ss_dssp CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSS-------
T ss_pred cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCC-------
Confidence 89999999999999999998766 5789999999999999997 677999999999999999999998643
Q ss_pred CCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCccC
Q 020245 252 AGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIED 329 (329)
Q Consensus 252 ~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~~ 329 (329)
...+++++||+++++|+.++. +|.+|.. +++++++++ |||+||.+. ...++++++||+++++|++
T Consensus 228 --~~~~~v~~yd~~~~~W~~~~~------~p~~r~~--~~~~~~~~~--i~v~GG~~~-~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 228 --DQLNSVERYDVETETWTFVAP------MKHRRSA--LGITVHQGR--IYVLGGYDG-HTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp --SBCCCEEEEETTTTEEEECCC------CSSCCBS--CEEEEETTE--EEEECCBCS-SCBCCEEEEEETTTTEEEE
T ss_pred --CccceEEEEeCCCCcEEECCC------CCCCccc--eEEEEECCE--EEEEcCcCC-CcccceEEEEcCCCCEEee
Confidence 236789999999999999997 8899998 888889865 999999875 3678899999999999973
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.1e-48 Score=329.15 Aligned_cols=267 Identities=20% Similarity=0.340 Sum_probs=235.9
Q ss_pred EEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEE
Q 020245 26 ITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 26 ~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
.+.++++||++||... ...+++++||+.+++|..++. +|.+|..|++++++++||++||.. .....+++++||
T Consensus 11 ~~~~~~~i~v~GG~~~---~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~~d 83 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAP---KAIRSVECYDFKEERWHQVAE---LPSRRCRAGMVYMAGLVFAVGGFN-GSLRVRTVDSYD 83 (302)
T ss_dssp ----CEEEEEECCBSS---SBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEESCBC-SSSBCCCEEEEE
T ss_pred ccCCCCEEEEECCCCC---CCCCcEEEEcCcCCcEeEccc---CCcccccceEEEECCEEEEEeCcC-CCccccceEEEC
Confidence 3446889999999754 235889999999999999864 778999999999999999999988 556788999999
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCE
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGK 185 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
+.+++|++++++ |.+|..|+++.++++||++||......++++++||+.+++|+.++++ |.+|..|+++.++++
T Consensus 84 ~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~ 157 (302)
T 2xn4_A 84 PVKDQWTSVANM---RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM---NTRRSSVGVGVVGGL 157 (302)
T ss_dssp TTTTEEEEECCC---SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC---SSCCBSCEEEEETTE
T ss_pred CCCCceeeCCCC---CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC---CCcccCceEEEECCE
Confidence 999999999987 78999999999999999999988777889999999999999999887 688999999999999
Q ss_pred EEEEeeeCCC---CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEE
Q 020245 186 IWVVYGFAGV---EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSL 262 (329)
Q Consensus 186 l~v~gG~~~~---~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
||++||..+. ..+++++||+.+++|+.+. .+|.+|..|+++.++++||++||.+.. ...+++++|
T Consensus 158 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~---------~~~~~~~~y 225 (302)
T 2xn4_A 158 LYAVGGYDVASRQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGP---------LVRKSVEVY 225 (302)
T ss_dssp EEEECCEETTTTEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSS---------SBCCCEEEE
T ss_pred EEEEeCCCCCCCccccEEEEEeCCCCcEEECC---CCccccccccEEEECCEEEEECCCCCC---------cccceEEEE
Confidence 9999998765 3789999999999999997 677999999999999999999997543 235789999
Q ss_pred EcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCcc
Q 020245 263 DTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIE 328 (329)
Q Consensus 263 d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~ 328 (329)
|+++++|+.++. +|.+|.. +++++++++ |||+||.+.. ..++++++||+++++|+
T Consensus 226 d~~~~~W~~~~~------~~~~r~~--~~~~~~~~~--i~v~GG~~~~-~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 226 DPTTNAWRQVAD------MNMCRRN--AGVCAVNGL--LYVVGGDDGS-CNLASVEYYNPTTDKWT 280 (302)
T ss_dssp ETTTTEEEEECC------CSSCCBS--CEEEEETTE--EEEECCBCSS-SBCCCEEEEETTTTEEE
T ss_pred eCCCCCEeeCCC------CCCcccc--CeEEEECCE--EEEECCcCCC-cccccEEEEcCCCCeEE
Confidence 999999999997 8889988 888888865 9999998754 56899999999999997
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3e-47 Score=324.96 Aligned_cols=261 Identities=18% Similarity=0.253 Sum_probs=235.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
.+.||++||... .+++++||+.+++|+.++. +|.+|.+|++++++++||++||.. ....+++++||+.++
T Consensus 11 ~~~l~~~GG~~~-----~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKD 80 (306)
T ss_dssp CCEEEEEECCSS-----TTSEEEEETTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTT
T ss_pred cceEEEEeCCCC-----CceEEEecCCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCC
Confidence 478999999754 4899999999999999875 678999999999999999999987 667899999999999
Q ss_pred cEEEcccCCCCCCCcccceeEeeCCeEEEEcccC-CCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEE
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCG-VSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWV 188 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~-~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v 188 (329)
+|+.++++ |.+|..|+++.++++||++||.+ ....++++++||+.+++|+.++++ |.+|..|+++.++++||+
T Consensus 81 ~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv 154 (306)
T 3ii7_A 81 SWYSKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM---LTQRCSHGMVEANGLIYV 154 (306)
T ss_dssp EEEEEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEE
T ss_pred eEEECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC---cCCcceeEEEEECCEEEE
Confidence 99999887 78999999999999999999987 555789999999999999999887 688999999999999999
Q ss_pred EeeeCCC-C----cccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 189 VYGFAGV-E----VDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 189 ~gG~~~~-~----~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
+||..+. . .+++++||+.+++|+.+. .+|.+|..|+++.++++|||+||.... ...+++++||
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~~~~yd 222 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGL---------GGLDNVEYYD 222 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETT---------EEBCCEEEEE
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCC---------CCCceEEEee
Confidence 9998765 3 789999999999999998 677999999999999999999997643 3467899999
Q ss_pred cCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCccC
Q 020245 264 TETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIED 329 (329)
Q Consensus 264 ~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~~ 329 (329)
+++++|+.++. +|.+|.. +++++++++ |||+||.+.. ..++++++||+++++|++
T Consensus 223 ~~~~~W~~~~~------~p~~r~~--~~~~~~~~~--i~v~GG~~~~-~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 223 IKLNEWKMVSP------MPWKGVT--VKCAAVGSI--VYVLAGFQGV-GRLGHILEYNTETDKWVA 277 (306)
T ss_dssp TTTTEEEECCC------CSCCBSC--CEEEEETTE--EEEEECBCSS-SBCCEEEEEETTTTEEEE
T ss_pred CCCCcEEECCC------CCCCccc--eeEEEECCE--EEEEeCcCCC-eeeeeEEEEcCCCCeEEe
Confidence 99999999987 8999998 888889855 9999998754 578899999999999973
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-47 Score=324.37 Aligned_cols=268 Identities=22% Similarity=0.371 Sum_probs=238.2
Q ss_pred EECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECC
Q 020245 28 IVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 28 ~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
.++++||++||..... ...+++++||+.+++|..++. +|.+|..|+++.++++||++||.. .....+++++||+.
T Consensus 12 ~~~~~i~~~GG~~~~~-~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~-~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQ-SPIDVVEKYDPKTQEWSFLPS---ITRKRRYVASVSLHDRIYVIGGYD-GRSRLSSVECLDYT 86 (301)
T ss_dssp -CCEEEEEECCEETTT-EECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBC-SSCBCCCEEEEETT
T ss_pred cCCCEEEEEeCccCCC-cceeEEEEEcCCCCeEEeCCC---CChhhccccEEEECCEEEEEcCCC-CCccCceEEEEECC
Confidence 3688999999944332 345899999999999999875 678999999999999999999988 66788999999999
Q ss_pred CCc---EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECC
Q 020245 108 TNQ---WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQG 184 (329)
Q Consensus 108 ~~~---W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
+++ |+.++++ |.+|..|+++.++++||++||......++++++||+.+++|+.++++ |.+|..|+++.+++
T Consensus 87 ~~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~ 160 (301)
T 2vpj_A 87 ADEDGVWYSVAPM---NVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM---QTAREGAGLVVASG 160 (301)
T ss_dssp CCTTCCCEEECCC---SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC---SSCCBSCEEEEETT
T ss_pred CCCCCeeEECCCC---CCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCC---CCCcccceEEEECC
Confidence 999 9999877 78999999999999999999998777789999999999999999887 68899999999999
Q ss_pred EEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 185 KIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 185 ~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
+||++||.++. ..+++++||+.+++|+.+. .+|.+|..|+++.++++|||+||..... ..+++++||
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~---------~~~~v~~yd 228 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTA---------HLSSVEAYN 228 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSS---------BCCCEEEEE
T ss_pred EEEEECCCCCCcccceEEEEeCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCc---------ccceEEEEe
Confidence 99999998766 6789999999999999997 6789999999999999999999976432 267899999
Q ss_pred cCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCccC
Q 020245 264 TETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIED 329 (329)
Q Consensus 264 ~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~~ 329 (329)
+++++|+.++. +|.+|.. +++++++++ |||+||.+.. ..++++++||+++++|++
T Consensus 229 ~~~~~W~~~~~------~p~~r~~--~~~~~~~~~--i~v~GG~~~~-~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 229 IRTDSWTTVTS------MTTPRCY--VGATVLRGR--LYAIAGYDGN-SLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp TTTTEEEEECC------CSSCCBS--CEEEEETTE--EEEECCBCSS-SBEEEEEEEETTTTEEEE
T ss_pred CCCCcEEECCC------CCCcccc--eeEEEECCE--EEEEcCcCCC-cccccEEEEcCCCCeEEE
Confidence 99999999987 8899988 888889865 9999998754 567899999999999973
No 5
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.6e-47 Score=333.63 Aligned_cols=289 Identities=19% Similarity=0.235 Sum_probs=235.0
Q ss_pred CCCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCC--CCcEEEEeeCCCCC-CCCcceeEEEECCEEEEEccc
Q 020245 15 GSGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLE--TLTWSVADVTGDVP-PPRVGVTMAAVGHTIYMFGGR 91 (329)
Q Consensus 15 ~~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~--~~~W~~~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~ 91 (329)
+++|.+|.++++++++++|||+||... +++++||+. +++|+.++. +| .+|..|++++++++|||+||.
T Consensus 4 ~~lP~~r~~~~~~~~~~~iyv~GG~~~------~~~~~~d~~~~~~~W~~~~~---~p~~~R~~~~~~~~~~~lyv~GG~ 74 (357)
T 2uvk_A 4 PETPVPFKSGTGAIDNDTVYIGLGSAG------TAWYKLDTQAKDKKWTALAA---FPGGPRDQATSAFIDGNLYVFGGI 74 (357)
T ss_dssp CCCSSCCCSCEEEEETTEEEEECGGGT------TCEEEEETTSSSCCEEECCC---CTTCCCBSCEEEEETTEEEEECCE
T ss_pred CCCCccccceEEEEECCEEEEEeCcCC------CeEEEEccccCCCCeeECCC---CCCCcCccceEEEECCEEEEEcCC
Confidence 458999999999999999999999763 589999998 489999876 66 799999999999999999998
Q ss_pred c----CCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCc---------------------
Q 020245 92 D----GTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSG--------------------- 146 (329)
Q Consensus 92 ~----~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~--------------------- 146 (329)
. .....++++++||+.+++|+++++++ |.+|..|+++..+++|||+||.....
T Consensus 75 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
T 2uvk_A 75 GKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKI 152 (357)
T ss_dssp EECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhh
Confidence 2 13456889999999999999999885 68999999999999999999976432
Q ss_pred -------------CcceeEEEEcCCCeEEEecCCCCCCCC-CCCcEEEEECCEEEEEeeeCCC--CcccEEEEeC--CCC
Q 020245 147 -------------RLNDLWGFDVVDRKWIQYPSAGENCKG-RGGPGLIVTQGKIWVVYGFAGV--EVDDVHCFDP--AHA 208 (329)
Q Consensus 147 -------------~~~~~~~~~~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~~l~v~gG~~~~--~~~~~~~~d~--~~~ 208 (329)
.++++++||+.+++|+.+.+++ .+ +..++++..+++|||+||..+. ..++++.||+ .++
T Consensus 153 ~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p---~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 153 NAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESP---WYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp HHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECS---SCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred hhhhccccccccCCcccEEEEeCCCCcEEECCCCC---CCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 4689999999999999998874 44 4559999999999999997644 4678999986 899
Q ss_pred ceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCC-----c---CCCCeeeceeEEEEcCCceeEeecCCCCCCC
Q 020245 209 QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLG-----H---LGAGKFAGELYSLDTETLVWTRWDDGPGSDH 280 (329)
Q Consensus 209 ~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~-----~---~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 280 (329)
+|+.+..+ ..|..|..|+++.++++|||+||........ . ........++++||+++++|++++.
T Consensus 230 ~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~------ 302 (357)
T 2uvk_A 230 KWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE------ 302 (357)
T ss_dssp EEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE------
T ss_pred cEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC------
Confidence 99999854 3344567888999999999999976432100 0 0011234689999999999999998
Q ss_pred CCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCcc
Q 020245 281 HPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIE 328 (329)
Q Consensus 281 ~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~ 328 (329)
+|.+|.. +++++++++ |||+||.+..+..+++|++|++++++|.
T Consensus 303 ~p~~r~~--~~~~~~~~~--i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 303 LSQGRAY--GVSLPWNNS--LLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CSSCCBS--SEEEEETTE--EEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred CCCCccc--ceeEEeCCE--EEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 8999998 888888865 9999999877777899999999999985
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=9e-46 Score=315.83 Aligned_cols=260 Identities=20% Similarity=0.291 Sum_probs=233.1
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG 82 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (329)
+.+++|.+++. +|.+|.+|++++++++||++||.. ....+++++||+.+++|+.++. +|.+|..|++++++
T Consensus 31 ~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~---~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~ 101 (306)
T 3ii7_A 31 PKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ---LFPIKRMDCYNVVKDSWYSKLG---PPTPRDSLAACAAE 101 (306)
T ss_dssp TTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBS---SSBCCEEEEEETTTTEEEEEEC---CSSCCBSCEEEEET
T ss_pred CCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCC---CCCcceEEEEeCCCCeEEECCC---CCccccceeEEEEC
Confidence 46789999965 789999999999999999999986 3345899999999999999876 77899999999999
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcC----cceeEEEEcCC
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGR----LNDLWGFDVVD 158 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~----~~~~~~~~~~~ 158 (329)
++||++||........+++++||+.+++|+.++++ |.+|..|+++.++++||++||...... ++++++||+.+
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM---LTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC---cCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 99999999875667789999999999999999887 789999999999999999999876655 89999999999
Q ss_pred CeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEE
Q 020245 159 RKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVV 237 (329)
Q Consensus 159 ~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i 237 (329)
++|+.++++ |.+|..|+++.++++||++||.++. ..+++++||+.+++|+.+. .+|.+|..|+++.++++|||
T Consensus 179 ~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v 252 (306)
T 3ii7_A 179 ETWTELCPM---IEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS---PMPWKGVTVKCAAVGSIVYV 252 (306)
T ss_dssp TEEEEECCC---SSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC---CCSCCBSCCEEEEETTEEEE
T ss_pred CeEEECCCc---cchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC---CCCCCccceeEEEECCEEEE
Confidence 999999977 6889999999999999999998766 6789999999999999997 67899999999999999999
Q ss_pred EcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCC
Q 020245 238 YGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGG 297 (329)
Q Consensus 238 ~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~ 297 (329)
+||.+.. ...+++++||+++++|+.++. +|.+|.. ++++++.+
T Consensus 253 ~GG~~~~---------~~~~~~~~yd~~~~~W~~~~~------~~~~r~~--~~~~~~~~ 295 (306)
T 3ii7_A 253 LAGFQGV---------GRLGHILEYNTETDKWVANSK------VRAFPVT--SCLICVVD 295 (306)
T ss_dssp EECBCSS---------SBCCEEEEEETTTTEEEEEEE------EECCSCT--TCEEEEEE
T ss_pred EeCcCCC---------eeeeeEEEEcCCCCeEEeCCC------cccccce--eEEEEECC
Confidence 9997543 236789999999999999998 8899998 77776654
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=314.24 Aligned_cols=261 Identities=18% Similarity=0.304 Sum_probs=231.3
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG 82 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (329)
+.+++|.++.. +|.+|..|++++++++||++||.... ...+++++||+.+++|+.++. +|.+|..|++++++
T Consensus 37 ~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 37 FKEERWHQVAE---LPSRRCRAGMVYMAGLVFAVGGFNGS--LRVRTVDSYDPVKDQWTSVAN---MRDRRSTLGAAVLN 108 (302)
T ss_dssp TTTTEEEEECC---CSSCCBSCEEEEETTEEEEESCBCSS--SBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEET
T ss_pred CcCCcEeEccc---CCcccccceEEEECCEEEEEeCcCCC--ccccceEEECCCCCceeeCCC---CCccccceEEEEEC
Confidence 45779999964 78999999999999999999998643 345899999999999999986 77899999999999
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCc--CcceeEEEEcCCCe
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSG--RLNDLWGFDVVDRK 160 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~--~~~~~~~~~~~~~~ 160 (329)
++||++||.. .....+++++||+.+++|+.++++ |.+|..|+++.++++||++||..... .++++++||+.+++
T Consensus 109 ~~iyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 109 GLLYAVGGFD-GSTGLSSVEAYNIKSNEWFHVAPM---NTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TEEEEEEEEC-SSCEEEEEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CEEEEEcCCC-CCccCceEEEEeCCCCeEeecCCC---CCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 9999999998 566788999999999999999887 78899999999999999999986653 47899999999999
Q ss_pred EEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEc
Q 020245 161 WIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYG 239 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~G 239 (329)
|+.++++ |.+|..|+++.++++||++||.++. ..+++++||+++++|+.+. .+|.+|..|+++.++++|||+|
T Consensus 185 W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 185 WTYIAEM---STRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA---DMNMCRRNAGVCAVNGLLYVVG 258 (302)
T ss_dssp EEEECCC---SSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEC
T ss_pred EEECCCC---ccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC---CCCCccccCeEEEECCEEEEEC
Confidence 9999877 6889999999999999999998766 5689999999999999998 6778999999999999999999
Q ss_pred CccCCCCCCcCCCCeeeceeEEEEcCCceeEeec-CCCCCCCCCCCCCcceecccccCCc
Q 020245 240 GEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWD-DGPGSDHHPGPRGWCAFAGGLRGGK 298 (329)
Q Consensus 240 G~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~p~~r~~~~~~~~~~~~~ 298 (329)
|.+.. ...+++++||+++++|+.++ . +|.+|.. +++++++++
T Consensus 259 G~~~~---------~~~~~v~~yd~~~~~W~~~~~~------~~~~r~~--~~~~~~~~~ 301 (302)
T 2xn4_A 259 GDDGS---------CNLASVEYYNPTTDKWTVVSSC------MSTGRSY--AGVTVIDKR 301 (302)
T ss_dssp CBCSS---------SBCCCEEEEETTTTEEEECSSC------CSSCCBS--CEEEEEEC-
T ss_pred CcCCC---------cccccEEEEcCCCCeEEECCcc------cCccccc--ceEEEeccc
Confidence 97543 23678999999999999997 5 7889998 888888754
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-45 Score=315.47 Aligned_cols=259 Identities=22% Similarity=0.360 Sum_probs=230.5
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEECCEEEEEcCccC--CCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEFT--PRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA 80 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~~--~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~ 80 (329)
+.+++|.+++. +|.+|..|++++++++||++||... ......+++++||+.+++|+.++. +|.+|..|++++
T Consensus 46 ~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~ 119 (308)
T 1zgk_A 46 PSNGTWLRLAD---LQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP---MSVPRNRIGVGV 119 (308)
T ss_dssp TTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC---CSSCCBTCEEEE
T ss_pred CCCCeEeECCC---CCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC---CCcCccccEEEE
Confidence 45789999964 7899999999999999999999741 223345899999999999999875 678999999999
Q ss_pred ECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 81 VGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 81 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++++||++||.. .....+++++||+.+++|+.++++ |.+|..|+++.++++||++||......++++++||+.+++
T Consensus 120 ~~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 120 IDGHIYAVGGSH-GCIHHNSVERYEPERDEWHLVAPM---LTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp ETTEEEEECCEE-TTEECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred ECCEEEEEcCCC-CCcccccEEEECCCCCeEeECCCC---CccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 999999999988 556788999999999999999887 7889999999999999999998877778999999999999
Q ss_pred EEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEc
Q 020245 161 WIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYG 239 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~G 239 (329)
|+.++++ |.+|..++++.++++|||+||.++. ..+++++||+.+++|+.+. .+|.+|..|+++.++++|||+|
T Consensus 196 W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~G 269 (308)
T 1zgk_A 196 WRMITAM---NTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA---PMKHRRSALGITVHQGRIYVLG 269 (308)
T ss_dssp EEECCCC---SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEC
T ss_pred EeeCCCC---CCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC---CCCCCccceEEEEECCEEEEEc
Confidence 9999887 6789999999999999999998765 5789999999999999998 6779999999999999999999
Q ss_pred CccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccc
Q 020245 240 GEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGL 294 (329)
Q Consensus 240 G~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~ 294 (329)
|.+.. ...+++++||+++++|+.++. +|.+|.. +++++
T Consensus 270 G~~~~---------~~~~~v~~yd~~~~~W~~~~~------~p~~r~~--~~~~~ 307 (308)
T 1zgk_A 270 GYDGH---------TFLDSVECYDPDTDTWSEVTR------MTSGRSG--VGVAV 307 (308)
T ss_dssp CBCSS---------CBCCEEEEEETTTTEEEEEEE------CSSCCBS--CEEEE
T ss_pred CcCCC---------cccceEEEEcCCCCEEeecCC------CCCCccc--ceeEe
Confidence 97542 346799999999999999998 8999998 66654
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=320.93 Aligned_cols=279 Identities=19% Similarity=0.238 Sum_probs=235.7
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEECCEEEEEcCcc----CCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeE
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEF----TPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTM 78 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~----~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~ 78 (329)
+.+++|.. .. .+.|.+|.+|++++++++|||+||.. .......+++++||+.+++|+.++. +|.+|.+|++
T Consensus 20 ~~~~~W~~-~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~ 94 (315)
T 4asc_A 20 PAANECYC-AS-LSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP---LPSPRCLFGL 94 (315)
T ss_dssp TTTTEEEE-EE-CCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC---BSSCEESCEE
T ss_pred CCCCeEec-CC-CCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC---CCcchhceeE
Confidence 46789987 22 22367899999999999999999973 2233344679999999999998876 7789999999
Q ss_pred EEECCEEEEEccccC--CCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEccc-CCCcCcceeEEEE
Q 020245 79 AAVGHTIYMFGGRDG--THKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGC-GVSGRLNDLWGFD 155 (329)
Q Consensus 79 ~~~~~~iyv~GG~~~--~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~~~ 155 (329)
++++++||++||... .....+++++||+.+++|++++++ |.+|..|+++.++++||++||. .....++++++||
T Consensus 95 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 171 (315)
T 4asc_A 95 GEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL---PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD 171 (315)
T ss_dssp EEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEE
T ss_pred EEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC---CCcccceeEEEECCEEEEEeCCCCCCcccceEEEEe
Confidence 999999999999762 467889999999999999999887 7899999999999999999998 4555789999999
Q ss_pred cCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCE
Q 020245 156 VVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKH 234 (329)
Q Consensus 156 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~ 234 (329)
+.+++|+.++++ |.+|..|+++.++++|||+||..+. ..+++++||+++++|+.+. .+|.+|..|+++.++++
T Consensus 172 ~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~ 245 (315)
T 4asc_A 172 PKKFEWKELAPM---QTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE---AFPQERSSLSLVSLVGT 245 (315)
T ss_dssp TTTTEEEECCCC---SSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE
T ss_pred CCCCeEEECCCC---CCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC---CCCCcccceeEEEECCE
Confidence 999999999987 6899999999999999999998766 5789999999999999997 67899999999999999
Q ss_pred EEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCC
Q 020245 235 IVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGN 307 (329)
Q Consensus 235 i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~ 307 (329)
|||+||.+.....+........+++++||+++++|+.+. |.+|.. +++++++++ ||++...
T Consensus 246 l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--------~~~r~~--~~~~~~~~~--l~v~~~~ 306 (315)
T 4asc_A 246 LYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL--------REIAYA--AGATFLPVR--LNVLRLT 306 (315)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--------SCSSCC--SSCEEEEEE--ECGGGSE
T ss_pred EEEECCccccCcCCccccccccCcEEEecCCCChhhhhc--------cCCcCc--cceEEeCCE--EEEEEeh
Confidence 999999864211001111145689999999999999994 678888 889999955 9998763
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-45 Score=314.60 Aligned_cols=269 Identities=17% Similarity=0.287 Sum_probs=229.0
Q ss_pred CCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccC-----
Q 020245 19 GARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDG----- 93 (329)
Q Consensus 19 ~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~----- 93 (329)
.+|..... ++.||++|| .++++||+.+++|...+.+ .|.+|.+|++++.+++||++||...
T Consensus 7 ~~r~~~~~---~~~i~~~GG---------~~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 72 (318)
T 2woz_A 7 IPRHGMFV---KDLILLVND---------TAAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENK 72 (318)
T ss_dssp SCCCCCSE---EEEEEEECS---------SEEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-----
T ss_pred ccccccee---cchhhhccc---------cceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCcccc
Confidence 35655444 578999999 3489999999999884432 4578999999999999999999631
Q ss_pred CCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccC--CCcCcceeEEEEcCCCeEEEecCCCCCC
Q 020245 94 THKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCG--VSGRLNDLWGFDVVDRKWIQYPSAGENC 171 (329)
Q Consensus 94 ~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~--~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 171 (329)
.....+++++||+.+++|++++++ |.+|..|+++.++++||++||.. ....++++++||+.+++|+.++++ |
T Consensus 73 ~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p 146 (318)
T 2woz_A 73 DQPLQSYFFQLDNVSSEWVGLPPL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL---P 146 (318)
T ss_dssp --CCCBEEEEEETTTTEEEECSCB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC---S
T ss_pred CCCccccEEEEeCCCCcEEECCCC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC---C
Confidence 122345699999999999999877 78999999999999999999986 345678999999999999999987 6
Q ss_pred CCCCCcEEEEECCEEEEEeeeCCC--CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCc
Q 020245 172 KGRGGPGLIVTQGKIWVVYGFAGV--EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGH 249 (329)
Q Consensus 172 ~~~~~~~~~~~~~~l~v~gG~~~~--~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~ 249 (329)
.+|..|+++..+++||++||.... ..+++++||+.+++|+.+. .+|.+|..|+++.++++|||+||....
T Consensus 147 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~----- 218 (318)
T 2woz_A 147 IKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTED----- 218 (318)
T ss_dssp SCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETT-----
T ss_pred CcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCC-----
Confidence 889999999999999999998543 5789999999999999997 677999999999999999999998643
Q ss_pred CCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCC--------CCcccceEEEe
Q 020245 250 LGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPS--------NDRLDDIYFFT 321 (329)
Q Consensus 250 ~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~--------~~~~~~v~~~~ 321 (329)
...+++++||+++++|+.++. +|.+|.. +++++++++ ||++||.+.. ....+++|+||
T Consensus 219 ----~~~~~~~~yd~~~~~W~~~~~------~p~~r~~--~~~~~~~~~--i~v~GG~~~~~~~~~~~~~~~~~~v~~yd 284 (318)
T 2woz_A 219 ----GLSASVEAFDLKTNKWEVMTE------FPQERSS--ISLVSLAGS--LYAIGGFAMIQLESKEFAPTEVNDIWKYE 284 (318)
T ss_dssp ----EEEEEEEEEETTTCCEEECCC------CSSCCBS--CEEEEETTE--EEEECCBCCBC----CCBCCBCCCEEEEE
T ss_pred ----CccceEEEEECCCCeEEECCC------CCCcccc--eEEEEECCE--EEEECCeeccCCCCceeccceeeeEEEEe
Confidence 346899999999999999987 8899998 888999965 9999998752 13578999999
Q ss_pred cccCCccC
Q 020245 322 PCLDGIED 329 (329)
Q Consensus 322 ~~~~~~~~ 329 (329)
+++++|++
T Consensus 285 ~~~~~W~~ 292 (318)
T 2woz_A 285 DDKKEWAG 292 (318)
T ss_dssp TTTTEEEE
T ss_pred CCCCEehh
Confidence 99999974
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=8.4e-45 Score=309.12 Aligned_cols=259 Identities=18% Similarity=0.280 Sum_probs=231.9
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc---EEEEeeCCCCCCCCcceeEE
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT---WSVADVTGDVPPPRVGVTMA 79 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~p~~r~~~~~~ 79 (329)
+.+++|++++. +|.+|..|++++++++||++||... ....+++++||+.+++ |+.++. +|.+|..|+++
T Consensus 38 ~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~--~~~~~~~~~~d~~~~~~~~W~~~~~---~p~~r~~~~~~ 109 (301)
T 2vpj_A 38 PKTQEWSFLPS---ITRKRRYVASVSLHDRIYVIGGYDG--RSRLSSVECLDYTADEDGVWYSVAP---MNVRRGLAGAT 109 (301)
T ss_dssp TTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCS--SCBCCCEEEEETTCCTTCCCEEECC---CSSCCBSCEEE
T ss_pred CCCCeEEeCCC---CChhhccccEEEECCEEEEEcCCCC--CccCceEEEEECCCCCCCeeEECCC---CCCCccceeEE
Confidence 45789999975 7889999999999999999999863 3345899999999999 999965 77899999999
Q ss_pred EECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 80 AVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 80 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
+++++||++||.. .....+++++||+.+++|+.++++ |.+|..|+++.++++||++||......++++++||+.++
T Consensus 110 ~~~~~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 110 TLGDMIYVSGGFD-GSRRHTSMERYDPNIDQWSMLGDM---QTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EETTEEEEECCBC-SSCBCCEEEEEETTTTEEEEEEEC---SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EECCEEEEEcccC-CCcccceEEEEcCCCCeEEECCCC---CCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 9999999999998 556688999999999999999887 788999999999999999999887778899999999999
Q ss_pred eEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEE
Q 020245 160 KWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVY 238 (329)
Q Consensus 160 ~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~ 238 (329)
+|+.++++ |.+|..|+++..+++||++||.++. ..+++++||+++++|+.+. .+|.+|..|+++.++++|||+
T Consensus 186 ~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~ 259 (301)
T 2vpj_A 186 HWTNVTPM---ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT---SMTTPRCYVGATVLRGRLYAI 259 (301)
T ss_dssp EEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEE
T ss_pred cEEeCCCC---CcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC---CCCCcccceeEEEECCEEEEE
Confidence 99999877 6889999999999999999998766 4789999999999999997 677999999999999999999
Q ss_pred cCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccC
Q 020245 239 GGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRG 296 (329)
Q Consensus 239 GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~ 296 (329)
||.... ...+++++||+++++|+.++. +|.+|.. +++++++
T Consensus 260 GG~~~~---------~~~~~v~~yd~~~~~W~~~~~------~~~~r~~--~~~~~~~ 300 (301)
T 2vpj_A 260 AGYDGN---------SLLSSIECYDPIIDSWEVVTS------MGTQRCD--AGVCVLR 300 (301)
T ss_dssp CCBCSS---------SBEEEEEEEETTTTEEEEEEE------EEEEEES--CEEEEEE
T ss_pred cCcCCC---------cccccEEEEcCCCCeEEEcCC------CCccccc--ceEEEeC
Confidence 997543 236789999999999999998 8999988 7777654
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.7e-46 Score=317.87 Aligned_cols=261 Identities=16% Similarity=0.269 Sum_probs=225.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEcccc-----CCCCCCCceEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRD-----GTHKELNELYSF 104 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-----~~~~~~~~~~~~ 104 (329)
++.||++|| +++++||+.+++|+. +... .|.+|.+|++++++++||++||.. ......+++++|
T Consensus 4 ~~~l~~~GG---------~~~~~yd~~~~~W~~-~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 72 (315)
T 4asc_A 4 QDLIFMISE---------EGAVAYDPAANECYC-ASLS-SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQF 72 (315)
T ss_dssp EEEEEEEET---------TEEEEEETTTTEEEE-EECC-CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEE
T ss_pred ceEEEEEcC---------CceEEECCCCCeEec-CCCC-CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEe
Confidence 467999999 579999999999987 3322 467899999999999999999962 123345669999
Q ss_pred ECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCC---CcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE
Q 020245 105 DTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGV---SGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV 181 (329)
Q Consensus 105 d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~---~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 181 (329)
|+.+++|++++++ |.+|..|+++.++++||++||... ...++++++||+.+++|+.++++ |.+|..|+++.
T Consensus 73 d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~ 146 (315)
T 4asc_A 73 DHLDSEWLGMPPL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL---PYVVYGHTVLS 146 (315)
T ss_dssp ETTTTEEEECCCB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEE
T ss_pred cCCCCeEEECCCC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC---CCcccceeEEE
Confidence 9999999999887 789999999999999999999753 45789999999999999999987 68899999999
Q ss_pred ECCEEEEEeeeCCC--CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeecee
Q 020245 182 TQGKIWVVYGFAGV--EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGEL 259 (329)
Q Consensus 182 ~~~~l~v~gG~~~~--~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 259 (329)
++++||++||.... ..+++++||+.+++|+.+. .+|.+|..|+++.++++|||+||.... ...+++
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~---------~~~~~~ 214 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDT---------GLTSSA 214 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSS---------SEEEEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCC---------CccceE
Confidence 99999999998433 6799999999999999998 677999999999999999999997543 246799
Q ss_pred EEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCC----C----CcccceEEEecccCCccC
Q 020245 260 YSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPS----N----DRLDDIYFFTPCLDGIED 329 (329)
Q Consensus 260 ~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~----~----~~~~~v~~~~~~~~~~~~ 329 (329)
++||+++++|+.++. +|.+|.. +++++++++ |||+||.+.. + ..++++|+||+++++|++
T Consensus 215 ~~yd~~~~~W~~~~~------~p~~r~~--~~~~~~~~~--l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 215 EVYSITDNKWAPFEA------FPQERSS--LSLVSLVGT--LYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp EEEETTTTEEEEECC------CSSCCBS--CEEEEETTE--EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred EEEECCCCeEEECCC------CCCcccc--eeEEEECCE--EEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 999999999999997 8999998 888999865 9999998531 1 357899999999999973
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-45 Score=313.41 Aligned_cols=277 Identities=18% Similarity=0.276 Sum_probs=232.1
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEECCEEEEEcCccCC----CCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeE
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEFTP----RVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTM 78 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~~~----~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~ 78 (329)
+.+++|..... +.|.+|..|++++++++||++||.... .....+++++||+.+++|+.++. +|.+|..|++
T Consensus 31 ~~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~ 105 (318)
T 2woz_A 31 PMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP---LPSARCLFGL 105 (318)
T ss_dssp TTTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC---BSSCBCSCEE
T ss_pred CCCCceecccC--CccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC---CCccccccce
Confidence 46789998543 245789999999999999999996421 12334569999999999999875 7789999999
Q ss_pred EEECCEEEEEccccC-CCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCC-CcCcceeEEEEc
Q 020245 79 AAVGHTIYMFGGRDG-THKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGV-SGRLNDLWGFDV 156 (329)
Q Consensus 79 ~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~-~~~~~~~~~~~~ 156 (329)
++++++||++||... .....+++++||+.+++|++++++ |.+|.+|+++.++++||++||... ...++++++||+
T Consensus 106 ~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 106 GEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL---PIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC---SSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred EEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC---CCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 999999999999873 456778999999999999999877 788999999999999999999754 346789999999
Q ss_pred CCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEE
Q 020245 157 VDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHI 235 (329)
Q Consensus 157 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i 235 (329)
.+++|+.++++ |.+|..|+++.++++|||+||..+. ..+++++||+++++|+.+. .+|.+|..|+++.++++|
T Consensus 183 ~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i 256 (318)
T 2woz_A 183 KKGDWKDLAPM---KTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT---EFPQERSSISLVSLAGSL 256 (318)
T ss_dssp TTTEEEEECCC---SSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC---CCSSCCBSCEEEEETTEE
T ss_pred CCCEEEECCCC---CCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC---CCCCcccceEEEEECCEE
Confidence 99999999877 6889999999999999999998766 5689999999999999997 678999999999999999
Q ss_pred EEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEc
Q 020245 236 VVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYG 305 (329)
Q Consensus 236 ~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~G 305 (329)
|++||................+++++||+++++|+++ . |.+|.. +++++++++ |||+.
T Consensus 257 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~-------~~~r~~--~~~~~~~~~--iyi~~ 314 (318)
T 2woz_A 257 YAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-L-------KEIRYA--SGASCLATR--LNLFK 314 (318)
T ss_dssp EEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-E-------SCCGGG--TTCEEEEEE--EEGGG
T ss_pred EEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-c-------cccccc--ccceeeCCE--EEEEE
Confidence 9999986532111111123467999999999999999 3 778888 899999955 99875
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3.1e-40 Score=309.41 Aligned_cols=287 Identities=15% Similarity=0.158 Sum_probs=228.1
Q ss_pred CCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEe-e--CCCCCCCCcceeEEEE--CCEEEEEcc
Q 020245 16 SGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVAD-V--TGDVPPPRVGVTMAAV--GHTIYMFGG 90 (329)
Q Consensus 16 ~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~-~--~~~~p~~r~~~~~~~~--~~~iyv~GG 90 (329)
..|.+|.+++ ++++++||++||... ...+++++||+.+++|+.++ . ...+|.+|.+|+++++ +++|||+||
T Consensus 384 ~~p~rr~g~~-~~~~~~iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG 459 (695)
T 2zwa_A 384 CPINRKFGDV-DVAGNDVFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGG 459 (695)
T ss_dssp CTTCCBSCEE-EECSSCEEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECC
T ss_pred CCCCCceeEE-EEECCEEEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcC
Confidence 4566666554 448999999999865 34589999999999999998 4 2347899999999999 999999999
Q ss_pred ccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCC
Q 020245 91 RDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGE 169 (329)
Q Consensus 91 ~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 169 (329)
.......++++++||+.+++|+.++++ |.+|..|+++.+ +++|||+||..... ++++||+.+++|+.+.+...
T Consensus 460 ~~~~~~~~~dv~~yd~~t~~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~ 533 (695)
T 2zwa_A 460 RKAPHQGLSDNWIFDMKTREWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDE 533 (695)
T ss_dssp BSSTTCBCCCCEEEETTTTEEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSG
T ss_pred CCCCCCccccEEEEeCCCCcEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCC
Confidence 985555789999999999999999887 789999999996 99999999987665 89999999999999998544
Q ss_pred CCCCCCCcEEEEEC---CEEEEEeeeCCC---CcccEEEEeCCCCc------eEEeeccCCCCCCcceeEEEEEC-CEEE
Q 020245 170 NCKGRGGPGLIVTQ---GKIWVVYGFAGV---EVDDVHCFDPAHAQ------WAQVETSGEKPTARSVFSTVGIG-KHIV 236 (329)
Q Consensus 170 ~~~~~~~~~~~~~~---~~l~v~gG~~~~---~~~~~~~~d~~~~~------w~~~~~~~~~p~~r~~~~~~~~~-~~i~ 236 (329)
.|.+|..|+++.++ ++|||+||.... ..+++++||+.+++ |+.+..+ ++.+|..|+++.++ ++||
T Consensus 534 ~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~~~~~~~~iy 611 (695)
T 2zwa_A 534 FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQIKYITPRKLL 611 (695)
T ss_dssp GGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEEEEEETTEEE
T ss_pred CCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccceEEEeCCCEEE
Confidence 47899999977766 899999998543 57899999999999 8888752 25889999999999 9999
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCC--CCCCCCCCcceecccccCCcceEEEEcCCCC---CC
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGS--DHHPGPRGWCAFAGGLRGGKHGLLVYGGNSP---SN 311 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~--~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~---~~ 311 (329)
|+||.+.... ....+++++||+++++|+.+..+... ...| .+.. |+++++++ +.|||+||-.. .+
T Consensus 612 v~GG~~~~~~------~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p-~~~g--h~~~~~~~-g~i~v~GGg~~cfsfG 681 (695)
T 2zwa_A 612 IVGGTSPSGL------FDRTNSIISLDPLSETLTSIPISRRIWEDHSL-MLAG--FSLVSTSM-GTIHIIGGGATCYGFG 681 (695)
T ss_dssp EECCBCSSCC------CCTTTSEEEEETTTTEEEECCCCHHHHHHSCC-CCSS--CEEECC----CEEEECCEEECTTSC
T ss_pred EECCccCCCC------CCCCCeEEEEECCCCeEEEeeccccccCCCCc-ccee--eeEEEeCC-CEEEEEeCCccCcCcc
Confidence 9999754321 12367899999999999966530000 0012 3445 77777775 35999999532 24
Q ss_pred CcccceEEEeccc
Q 020245 312 DRLDDIYFFTPCL 324 (329)
Q Consensus 312 ~~~~~v~~~~~~~ 324 (329)
...+++|.+|+..
T Consensus 682 t~~n~i~~ldl~~ 694 (695)
T 2zwa_A 682 SVTNVGLKLIAIA 694 (695)
T ss_dssp EEECCCEEEEECC
T ss_pred ccccceEEEEEEc
Confidence 5678999999864
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.9e-39 Score=282.58 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=203.9
Q ss_pred cceeEEeccCCCCC-CCCcceeEEEECCEEEEEcCc-c--CCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE
Q 020245 5 KGTWIKLDQKGSGP-GARSSHAITIVGQKVYAFGGE-F--TPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA 80 (329)
Q Consensus 5 ~~~W~~~~~~~~~p-~~r~~~~~~~~~~~l~~~GG~-~--~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~ 80 (329)
+++|.+++. +| .+|..|++++++++|||+||. . .......+++++||+.+++|+.++.+. |.+|..|++++
T Consensus 42 ~~~W~~~~~---~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~ 116 (357)
T 2uvk_A 42 DKKWTALAA---FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFV 116 (357)
T ss_dssp SCCEEECCC---CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEE
T ss_pred CCCeeECCC---CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEE
Confidence 589999976 67 799999999999999999998 3 223345689999999999999998753 58999999999
Q ss_pred ECCEEEEEccccCCC---------------------------------CCCCceEEEECCCCcEEEcccCCCCCCC-ccc
Q 020245 81 VGHTIYMFGGRDGTH---------------------------------KELNELYSFDTRTNQWTLLSNGDAGPPH-RSY 126 (329)
Q Consensus 81 ~~~~iyv~GG~~~~~---------------------------------~~~~~~~~~d~~~~~W~~~~~~~~~p~~-r~~ 126 (329)
.+++|||+||..... ..++++++||+.+++|+.+.++ |.+ |.+
T Consensus 117 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~~~~~ 193 (357)
T 2uvk_A 117 HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES---PWYGTAG 193 (357)
T ss_dssp ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC---SSCCCBS
T ss_pred ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCC---CCCCccc
Confidence 999999999986311 3568999999999999999887 554 555
Q ss_pred ceeEeeCCeEEEEcccCCCc-CcceeEEEEc--CCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC--------
Q 020245 127 HSTAADDRHVYIFGGCGVSG-RLNDLWGFDV--VDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV-------- 195 (329)
Q Consensus 127 ~~~~~~~~~i~v~GG~~~~~-~~~~~~~~~~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~-------- 195 (329)
|+++.++++|||+||..... ..++++.||+ .+++|+.+.+++. |..+..|+++..+++|||+||....
T Consensus 194 ~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~-~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 272 (357)
T 2uvk_A 194 AAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS-PDGVAGGFAGISNDSLIFAGGAGFKGSRENYQN 272 (357)
T ss_dssp CEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST-TTCCBSCEEEEETTEEEEECCEECTTHHHHHHT
T ss_pred ccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC-CcccccceEEEECCEEEEEcCccccCCcccccc
Confidence 99999999999999976543 5678999987 9999999988742 3456788899999999999996421
Q ss_pred ----------CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 196 ----------EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 196 ----------~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
.+.++++||+++++|+.+. .+|.+|..|+++.++++|||+||.+.. +...+++++|+.+
T Consensus 273 g~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~--------~~~~~~v~~l~~~ 341 (357)
T 2uvk_A 273 GKNYAHEGLKKSYSTDIHLWHNGKWDKSG---ELSQGRAYGVSLPWNNSLLIIGGETAG--------GKAVTDSVLITVK 341 (357)
T ss_dssp TCSSTTTTCCCEECCEEEECC---CEEEE---ECSSCCBSSEEEEETTEEEEEEEECGG--------GCEEEEEEEEEC-
T ss_pred cceeccccccceeeEEEEecCCCceeeCC---CCCCCcccceeEEeCCEEEEEeeeCCC--------CCEeeeEEEEEEc
Confidence 2368999999999999997 677999999999999999999997643 2346899999999
Q ss_pred CceeEeecC
Q 020245 266 TLVWTRWDD 274 (329)
Q Consensus 266 ~~~W~~~~~ 274 (329)
+++|.+...
T Consensus 342 ~~~~~~~~~ 350 (357)
T 2uvk_A 342 DNKVTVQNL 350 (357)
T ss_dssp CCSCEEEC-
T ss_pred CcEeEeeec
Confidence 999999875
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.2e-36 Score=282.98 Aligned_cols=298 Identities=16% Similarity=0.143 Sum_probs=218.3
Q ss_pred CCcceeEEeccCCCCCCCCcceeEEEE--CCEEEEEcCccCCCC----ccCCceEEEeCCCCcEEEEeeCCCCCCCCcce
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHAITIV--GQKVYAFGGEFTPRV----PVDNNLHVFDLETLTWSVADVTGDVPPPRVGV 76 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~~~GG~~~~~~----~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 76 (329)
+..++|..+.+ .||..++++++ +++||++||...... ...+.+++||+.+++|+.++.+ |.+|..+
T Consensus 173 p~~~~W~~~~~-----~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~---~~~~~~~ 244 (656)
T 1k3i_A 173 PGLGRWGPTID-----LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT---VTKHDMF 244 (656)
T ss_dssp TTSCEEEEEEE-----CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE---ECSCCCS
T ss_pred CCCCeeeeecc-----CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc---CCCCCCc
Confidence 56789999865 35566666666 899999999754221 1224789999999999988763 3444433
Q ss_pred --eEE-EECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCeEEEEcc-cCCCcCccee
Q 020245 77 --TMA-AVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGG-CGVSGRLNDL 151 (329)
Q Consensus 77 --~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG-~~~~~~~~~~ 151 (329)
+++ ..+++||++||... .++++||+.+++|++++++ |.+|..|+++.+ +++||++|| .+....++++
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~---~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDM---QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp SCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCC---SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCE
T ss_pred cccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCC---CccccccceEEecCCeEEEEeCcccCCcccccc
Confidence 344 35899999999872 2799999999999999877 789999999998 999999999 4555578899
Q ss_pred EEEEcCCCeEEEecCCCC--CCCCCCCcEEEEECCEEEEEeeeCCC-----CcccEEEEeCCCCceEEeeccCCC----C
Q 020245 152 WGFDVVDRKWIQYPSAGE--NCKGRGGPGLIVTQGKIWVVYGFAGV-----EVDDVHCFDPAHAQWAQVETSGEK----P 220 (329)
Q Consensus 152 ~~~~~~~~~W~~~~~~~~--~~~~~~~~~~~~~~~~l~v~gG~~~~-----~~~~~~~~d~~~~~w~~~~~~~~~----p 220 (329)
++||+.+++|+.++.... .+..+. ++++..++++|++||.++. ....++.||+.+++|......... +
T Consensus 317 e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~ 395 (656)
T 1k3i_A 317 EVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA 395 (656)
T ss_dssp EEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC
T ss_pred eEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC
Confidence 999999999999854321 123333 3445578999999998754 457899999999998764432111 1
Q ss_pred CCcceeEEEE---ECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceeccccc-C
Q 020245 221 TARSVFSTVG---IGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLR-G 296 (329)
Q Consensus 221 ~~r~~~~~~~---~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~-~ 296 (329)
.++..+++++ .+++||++||....... ........+++||+++++|..+.. ..+|.+|.. ++++++ +
T Consensus 396 ~~~~~~~av~~~~~~~~i~v~GG~~~~~~~---~~~~~~~~v~~yd~~~~~W~~~~~----~~mp~~R~~--~~~~~l~~ 466 (656)
T 1k3i_A 396 PDAMCGNAVMYDAVKGKILTFGGSPDYQDS---DATTNAHIITLGEPGTSPNTVFAS----NGLYFARTF--HTSVVLPD 466 (656)
T ss_dssp CCCBTCEEEEEETTTTEEEEECCBSSSSSS---BCCCCEEEEECCSTTSCCEEEECT----TCCSSCCBS--CEEEECTT
T ss_pred CCCCCCceEeccCCCCeEEEEeCCCCCCCC---CcCCcceEEEcCCCCCCCeeEEcc----CCCCCCccc--CCeEECCC
Confidence 1233455553 48999999997532110 001112378999999999999861 128999998 787777 6
Q ss_pred CcceEEEEcCCCCC-----CCcccceEEEecccCCcc
Q 020245 297 GKHGLLVYGGNSPS-----NDRLDDIYFFTPCLDGIE 328 (329)
Q Consensus 297 ~~~~i~i~GG~~~~-----~~~~~~v~~~~~~~~~~~ 328 (329)
+ .|||+||.+.. .....++++||+.+++|+
T Consensus 467 g--~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~ 501 (656)
T 1k3i_A 467 G--STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY 501 (656)
T ss_dssp S--CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE
T ss_pred C--CEEEECCcccCcCcCCCCcccceEEEcCCCCcee
Confidence 4 49999998632 256789999999999996
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.3e-35 Score=278.15 Aligned_cols=235 Identities=18% Similarity=0.248 Sum_probs=200.7
Q ss_pred CCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcc-cC--CCCCCCcccceeEee--CCeEEEEcccC
Q 020245 69 VPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLS-NG--DAGPPHRSYHSTAAD--DRHVYIFGGCG 143 (329)
Q Consensus 69 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~--~~~p~~r~~~~~~~~--~~~i~v~GG~~ 143 (329)
.|..|+++++ +++++|||+||.. . ...+++++||+.+++|+.++ ++ +..|.+|.+|+++.+ +++|||+||..
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~-~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~ 461 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSN-P-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRK 461 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBS-S-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBS
T ss_pred CCCCceeEEE-EECCEEEEECCCC-C-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCC
Confidence 5566666544 4899999999998 3 77899999999999999998 52 345889999999999 99999999987
Q ss_pred CCc-CcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCC
Q 020245 144 VSG-RLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPT 221 (329)
Q Consensus 144 ~~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~ 221 (329)
... .++++++||+.+++|+.++++ |.+|..|+++.+ +++|||+||..+.. ++++||+.+++|+.+...+.+|.
T Consensus 462 ~~~~~~~dv~~yd~~t~~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 462 APHQGLSDNWIFDMKTREWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp STTCBCCCCEEEETTTTEEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGG
T ss_pred CCCCccccEEEEeCCCCcEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCC
Confidence 755 789999999999999999887 689999999996 99999999987654 89999999999999987666889
Q ss_pred CcceeEEEEEC---CEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce------eEeecCCCCCCCC-CCCCCcceec
Q 020245 222 ARSVFSTVGIG---KHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV------WTRWDDGPGSDHH-PGPRGWCAFA 291 (329)
Q Consensus 222 ~r~~~~~~~~~---~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~------W~~~~~~~~~~~~-p~~r~~~~~~ 291 (329)
+|..|++++++ ++|||+||..... ....+++++||+.+++ |+.+.. + +.+|.. ++
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~-------~~~~~~v~~yd~~~~~w~~~~~W~~~~~------~p~~~R~~--~~ 601 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQ-------TTVSDKAIIFKYDAENATEPITVIKKLQ------HPLFQRYG--SQ 601 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTS-------SCBCCEEEEEEECTTCSSCCEEEEEEEE------CGGGCCBS--CE
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCC-------CeeeCcEEEEEccCCccccceEEEEcCC------CCCCCccc--ce
Confidence 99999987876 8999999975432 1346899999999999 898876 4 478888 88
Q ss_pred ccccC-CcceEEEEcCCCCCC--CcccceEEEecccCCcc
Q 020245 292 GGLRG-GKHGLLVYGGNSPSN--DRLDDIYFFTPCLDGIE 328 (329)
Q Consensus 292 ~~~~~-~~~~i~i~GG~~~~~--~~~~~v~~~~~~~~~~~ 328 (329)
+++++ ++ |||+||.+... ...+++++||+.+++|+
T Consensus 602 ~~~~~~~~--iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 602 IKYITPRK--LLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEETTE--EEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEeCCCE--EEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 88998 66 99999987543 36899999999999996
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2e-34 Score=269.83 Aligned_cols=294 Identities=14% Similarity=0.118 Sum_probs=217.3
Q ss_pred CCcceeEEeccCCCCCCCCccee--EEE-ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEE
Q 020245 3 SAKGTWIKLDQKGSGPGARSSHA--ITI-VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMA 79 (329)
Q Consensus 3 ~~~~~W~~~~~~~~~p~~r~~~~--~~~-~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~ 79 (329)
+.+++|.++.. +|.+|..++ +++ .+++||++||... .++++||+.+++|..++. +|.+|..|+++
T Consensus 226 ~~t~~w~~~~~---~~~~~~~~~~~~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~---~~~~R~~~s~~ 293 (656)
T 1k3i_A 226 PSTGIVSDRTV---TVTKHDMFCPGISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPD---MQVARGYQSSA 293 (656)
T ss_dssp TTTCCBCCCEE---EECSCCCSSCEEEECTTSCEEEECSSST------TCEEEEEGGGTEEEECCC---CSSCCSSCEEE
T ss_pred CCCCcEEeCcc---cCCCCCCccccccCCCCCCEEEeCCCCC------CceEEecCcCCceeECCC---CCccccccceE
Confidence 45788988876 566666554 343 5889999999754 379999999999999875 77899999999
Q ss_pred EE-CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCC--CCCCcccceeEeeCCeEEEEcccCCCc----CcceeE
Q 020245 80 AV-GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDA--GPPHRSYHSTAADDRHVYIFGGCGVSG----RLNDLW 152 (329)
Q Consensus 80 ~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~--~p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~ 152 (329)
++ +++||++||........+++++||+.+++|+.++.... .+..|. ++++..++++|++||.+... ...+++
T Consensus 294 ~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~ 372 (656)
T 1k3i_A 294 TMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMN 372 (656)
T ss_dssp ECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEE
T ss_pred EecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCcccee
Confidence 99 99999999954355678899999999999999854321 133444 35566799999999976532 467899
Q ss_pred EEEcCCCeEEEecCCCCC----CCCCCCcEEEE---ECCEEEEEeeeCC---C-Ccc---cEEEEeCCCCceEEeeccCC
Q 020245 153 GFDVVDRKWIQYPSAGEN----CKGRGGPGLIV---TQGKIWVVYGFAG---V-EVD---DVHCFDPAHAQWAQVETSGE 218 (329)
Q Consensus 153 ~~~~~~~~W~~~~~~~~~----~~~~~~~~~~~---~~~~l~v~gG~~~---~-~~~---~~~~~d~~~~~w~~~~~~~~ 218 (329)
.||+.+++|......... +..+..+++++ .+++||++||... . .++ .+++||+.+++|..+. ...
T Consensus 373 ~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~ 451 (656)
T 1k3i_A 373 WYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-SNG 451 (656)
T ss_dssp EEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-TTC
T ss_pred eeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-cCC
Confidence 999999998764433210 11233444443 5899999999643 1 233 7899999999999886 237
Q ss_pred CCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceeccccc--
Q 020245 219 KPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLR-- 295 (329)
Q Consensus 219 ~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~-- 295 (329)
+|.+|..|+++.+ +++|||+||....... .......++++||+++++|+.+.. +|.+|.. |+++++
T Consensus 452 mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~---~~~~~~~~v~~ydp~t~~W~~~~~------~~~~R~~--hs~a~ll~ 520 (656)
T 1k3i_A 452 LYFARTFHTSVVLPDGSTFITGGQRRGIPF---EDSTPVFTPEIYVPEQDTFYKQNP------NSIVRVY--HSISLLLP 520 (656)
T ss_dssp CSSCCBSCEEEECTTSCEEEECCBSBCCTT---CCCSBCCCCEEEEGGGTEEEECCC------CSSCCCT--TEEEEECT
T ss_pred CCCCcccCCeEECCCCCEEEECCcccCcCc---CCCCcccceEEEcCCCCceeecCC------CCCcccc--ccHhhcCC
Confidence 7899999998887 8999999997543110 012346789999999999999987 8999999 665554
Q ss_pred CCcceEEEEcCCCCCC--CcccceEEEecc
Q 020245 296 GGKHGLLVYGGNSPSN--DRLDDIYFFTPC 323 (329)
Q Consensus 296 ~~~~~i~i~GG~~~~~--~~~~~v~~~~~~ 323 (329)
+++ ||++||....+ ...-++++|.|.
T Consensus 521 dg~--v~v~GG~~~~~~~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 521 DGR--VFNGGGGLCGDCTTNHFDAQIFTPN 548 (656)
T ss_dssp TSC--EEEEECCCCTTCSCCCCEEEEEECG
T ss_pred CcE--EEecCCCCCCCCCCCeeEEEEEeCh
Confidence 644 99999964321 123356777764
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.60 E-value=0.00019 Score=60.81 Aligned_cols=248 Identities=8% Similarity=-0.013 Sum_probs=140.1
Q ss_pred CCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcE-EEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCC
Q 020245 20 ARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTW-SVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKE 97 (329)
Q Consensus 20 ~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 97 (329)
....+.++..++++|+.... .+.+.++|+.+.+- ..++. ... -+.++. -++++|+....
T Consensus 43 g~~~~~i~~~~~~lyv~~~~-------~~~v~viD~~t~~~~~~i~~---~~~---p~~i~~~~~g~lyv~~~~------ 103 (328)
T 3dsm_A 43 GDVAQSMVIRDGIGWIVVNN-------SHVIFAIDINTFKEVGRITG---FTS---PRYIHFLSDEKAYVTQIW------ 103 (328)
T ss_dssp BSCEEEEEEETTEEEEEEGG-------GTEEEEEETTTCCEEEEEEC---CSS---EEEEEEEETTEEEEEEBS------
T ss_pred CccceEEEEECCEEEEEEcC-------CCEEEEEECcccEEEEEcCC---CCC---CcEEEEeCCCeEEEEECC------
Confidence 34446677789999998752 26799999998776 33432 111 233333 67899997532
Q ss_pred CCceEEEECCCCcEEEcccCCCCC-CCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 98 LNELYSFDTRTNQWTLLSNGDAGP-PHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 98 ~~~~~~~d~~~~~W~~~~~~~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
...+.++|+.+.+-...-..+... ....-..++..++++|+..-. ..+.+.++|+.+.+..........| .
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~g~~p----~ 175 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTIGIQP----T 175 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEECSSCB----C
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEcCCCc----c
Confidence 368999999988755322222100 000122333478899998420 1267999999998865544332111 1
Q ss_pred cEEEEECCEEEEEeeeCCC--C----cccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCC
Q 020245 177 PGLIVTQGKIWVVYGFAGV--E----VDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLG 248 (329)
Q Consensus 177 ~~~~~~~~~l~v~gG~~~~--~----~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~ 248 (329)
.....-++++|+....... . ...++++|+++.+..... ..|.......++.. ++.||+..+
T Consensus 176 ~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~---~~~~g~~p~~la~~~d~~~lyv~~~-------- 244 (328)
T 3dsm_A 176 SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF---KFKLGDWPSEVQLNGTRDTLYWINN-------- 244 (328)
T ss_dssp CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE---ECCTTCCCEEEEECTTSCEEEEESS--------
T ss_pred ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE---ecCCCCCceeEEEecCCCEEEEEcc--------
Confidence 1222345888887532211 1 368999999888765432 12222223344443 457777532
Q ss_pred cCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCC-CCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 249 HLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPG-PRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 249 ~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~-~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
.++++|+++.+...... .+. ...- .++++..+.+.||+....+. .....|++||++.
T Consensus 245 ---------~v~~~d~~t~~~~~~~~------~~~~~~~p--~gi~vdp~~g~lyva~~~~y--~~~~~V~v~d~~g 302 (328)
T 3dsm_A 245 ---------DIWRMPVEADRVPVRPF------LEFRDTKY--YGLTVNPNNGEVYVADAIDY--QQQGIVYRYSPQG 302 (328)
T ss_dssp ---------SEEEEETTCSSCCSSCS------BCCCSSCE--EEEEECTTTCCEEEEECTTS--SSEEEEEEECTTC
T ss_pred ---------EEEEEECCCCceeeeee------ecCCCCce--EEEEEcCCCCeEEEEccccc--ccCCEEEEECCCC
Confidence 68899998776532221 121 1222 44555432266999863221 1245789999873
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.53 E-value=0.00017 Score=57.70 Aligned_cols=189 Identities=16% Similarity=0.125 Sum_probs=119.9
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEE
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
+.+...++.||+..|... .+.+.++|+.+.+-..... +|....+..++..+++||+..... +.+++
T Consensus 24 qGL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~---l~~~~fgeGi~~~~~~ly~ltw~~------~~v~v 89 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAE---VPPPYFGAGIVAWRDRLIQLTWRN------HEGFV 89 (243)
T ss_dssp EEEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEESSS------SEEEE
T ss_pred ccEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEe---CCCCcceeEEEEeCCEEEEEEeeC------CEEEE
Confidence 466667889999998653 2679999999988654443 445556677888999999986443 78999
Q ss_pred EECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC-cEEEEE
Q 020245 104 FDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG-PGLIVT 182 (329)
Q Consensus 104 ~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~~~ 182 (329)
||+.+.+-.. .. +.+..+.+++..++++|+.-|. +.+..+|+.+.+-...-.....+.+... ..+...
T Consensus 90 ~D~~tl~~~~--ti---~~~~~Gwglt~dg~~L~vSdgs------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 90 YDLATLTPRA--RF---RYPGEGWALTSDDSHLYMSDGT------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp EETTTTEEEE--EE---ECSSCCCEEEECSSCEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EECCcCcEEE--EE---eCCCCceEEeeCCCEEEEECCC------CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe
Confidence 9998865332 22 1223456666667889997552 5799999998764333222111122222 234456
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCC---------CCCcceeEEEEE--CCEEEEEcCc
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEK---------PTARSVFSTVGI--GKHIVVYGGE 241 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~---------p~~r~~~~~~~~--~~~i~i~GG~ 241 (329)
++++|+--- ..+.+.+.|+++.+-...-....+ +..-.-.+.+.. ++.+||-|-.
T Consensus 159 ~G~lyanvw----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 159 NGELLANVW----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEET----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEEC----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 899986432 237999999999876554432211 111223445444 4588888754
No 21
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.37 E-value=0.00053 Score=55.46 Aligned_cols=203 Identities=9% Similarity=0.003 Sum_probs=122.4
Q ss_pred ceeEEeccCCCCCCCCcc--eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECC
Q 020245 6 GTWIKLDQKGSGPGARSS--HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGH 83 (329)
Q Consensus 6 ~~W~~~~~~~~~p~~r~~--~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 83 (329)
-.++.+.. .|..+.. ..+...++.||+..|... .+.+.++|+.+.+-..-.. ++....+..++..++
T Consensus 29 ~~~~vv~~---~phd~~~ftqGL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~---l~~~~FgeGit~~g~ 97 (262)
T 3nol_A 29 YDYQIVHS---YPHDTKAFTEGFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIE---LGKRYFGEGISDWKD 97 (262)
T ss_dssp EEEEEEEE---EECCTTCEEEEEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEE---CCTTCCEEEEEEETT
T ss_pred cceEEEEE---ecCCCCcccceEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEe---cCCccceeEEEEeCC
Confidence 34555555 3333222 444455889999988643 2578999999988644333 334445566788899
Q ss_pred EEEEEccccCCCCCCCceEEEECCCCcEE-EcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEE
Q 020245 84 TIYMFGGRDGTHKELNELYSFDTRTNQWT-LLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI 162 (329)
Q Consensus 84 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~ 162 (329)
+||+.... .+.+++||+.+.+-. .++.. -.+..++..++++|+.-|. +.++.+|+.+.+-.
T Consensus 98 ~ly~ltw~------~~~v~v~D~~t~~~~~ti~~~------~eG~glt~dg~~L~~SdGs------~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 98 KIVGLTWK------NGLGFVWNIRNLRQVRSFNYD------GEGWGLTHNDQYLIMSDGT------PVLRFLDPESLTPV 159 (262)
T ss_dssp EEEEEESS------SSEEEEEETTTCCEEEEEECS------SCCCCEEECSSCEEECCSS------SEEEEECTTTCSEE
T ss_pred EEEEEEee------CCEEEEEECccCcEEEEEECC------CCceEEecCCCEEEEECCC------CeEEEEcCCCCeEE
Confidence 99998543 378999999886543 33322 2455666667788887542 57999999987643
Q ss_pred EecCCCCCCCCCCC-cEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCC--------CCcceeEEEEE--
Q 020245 163 QYPSAGENCKGRGG-PGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKP--------TARSVFSTVGI-- 231 (329)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p--------~~r~~~~~~~~-- 231 (329)
..-.......+... ..+...++++|+--- ..+.+.+.|+++.+-...-....+. ..-.-.+.+..
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~~G~lyan~w----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWVDGEIFANVW----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEET----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred EEEEeccCCccccccceeEEECCEEEEEEc----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 33222110112111 124455899886432 2379999999998765544332111 11123445444
Q ss_pred CCEEEEEcCc
Q 020245 232 GKHIVVYGGE 241 (329)
Q Consensus 232 ~~~i~i~GG~ 241 (329)
++.+||.|-.
T Consensus 236 ~~~lfVTGK~ 245 (262)
T 3nol_A 236 HHRLFVTGKL 245 (262)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4588888754
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.35 E-value=0.00089 Score=56.66 Aligned_cols=235 Identities=13% Similarity=0.021 Sum_probs=131.6
Q ss_pred CceEEEeCCCCcEEEEeeC--CCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcE-EEcccCCCCCCCc
Q 020245 48 NNLHVFDLETLTWSVADVT--GDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQW-TLLSNGDAGPPHR 124 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~p~~r 124 (329)
..+..+|+.+.+....... ...+.......++..++++|+.... ...+.++|+.+.+- ..++.. ..++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~---~~p~ 87 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGF---TSPR 87 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECC---SSEE
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCC---CCCc
Confidence 7899999998887542110 0012233345566789999998642 36799999998775 334322 1222
Q ss_pred ccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCC-CCCCCcEEEEECCEEEEEeeeCCCCcccEEEE
Q 020245 125 SYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENC-KGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCF 203 (329)
Q Consensus 125 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~ 203 (329)
+.++..++++|+.... ...+.++|+.+.+-...-+.+... ....-..++..++++|+..-. ..+.+.++
T Consensus 88 --~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~---~~~~v~vi 157 (328)
T 3dsm_A 88 --YIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS---YQNRILKI 157 (328)
T ss_dssp --EEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT---TCCEEEEE
T ss_pred --EEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC---CCCEEEEE
Confidence 2233357799998642 267999999998765433332100 000122334478889987521 12689999
Q ss_pred eCCCCceEEeeccCCCCCCcceeEEE-EECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCC
Q 020245 204 DPAHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHP 282 (329)
Q Consensus 204 d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p 282 (329)
|+++.+.......+. .+ +.++ .-++++|+..-...... ........++++|+++.+....-. .+
T Consensus 158 D~~t~~~~~~i~~g~--~p---~~i~~~~dG~l~v~~~~~~~~~----~~~~~~~~v~~id~~t~~v~~~~~------~~ 222 (328)
T 3dsm_A 158 DTETDKVVDELTIGI--QP---TSLVMDKYNKMWTITDGGYEGS----PYGYEAPSLYRIDAETFTVEKQFK------FK 222 (328)
T ss_dssp ETTTTEEEEEEECSS--CB---CCCEECTTSEEEEEBCCBCTTC----SSCBCCCEEEEEETTTTEEEEEEE------CC
T ss_pred ECCCCeEEEEEEcCC--Cc---cceEEcCCCCEEEEECCCccCC----ccccCCceEEEEECCCCeEEEEEe------cC
Confidence 998887654332221 12 2222 23568887753221100 000012579999999887653222 23
Q ss_pred CCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCc
Q 020245 283 GPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGI 327 (329)
Q Consensus 283 ~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~ 327 (329)
....- ..+++..+.+.+|+..+ .|++||+++.+.
T Consensus 223 ~g~~p--~~la~~~d~~~lyv~~~---------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 223 LGDWP--SEVQLNGTRDTLYWINN---------DIWRMPVEADRV 256 (328)
T ss_dssp TTCCC--EEEEECTTSCEEEEESS---------SEEEEETTCSSC
T ss_pred CCCCc--eeEEEecCCCEEEEEcc---------EEEEEECCCCce
Confidence 22222 34444433266887643 788898877653
No 23
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.05 E-value=0.0033 Score=51.25 Aligned_cols=216 Identities=13% Similarity=0.061 Sum_probs=126.7
Q ss_pred ceeEEeccCCCCCCCC-cc-eeEEEEC-CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC
Q 020245 6 GTWIKLDQKGSGPGAR-SS-HAITIVG-QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG 82 (329)
Q Consensus 6 ~~W~~~~~~~~~p~~r-~~-~~~~~~~-~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (329)
-+.+.+.. .|... .+ +.++..+ +.||+..|... .+.+.++|+.+++-..... ++.......++..+
T Consensus 7 ~~~~vv~~---~p~~~~~f~~Gl~~~~dg~Lyvstg~~~-----~s~v~~iD~~tg~v~~~i~---l~~~~fgeGi~~~g 75 (266)
T 2iwa_A 7 YIVEVLNE---FPHDPYAFTQGLVYAENDTLFESTGLYG-----RSSVRQVALQTGKVENIHK---MDDSYFGEGLTLLN 75 (266)
T ss_dssp EEEEEEEE---EECCTTCCEEEEEECSTTEEEEEECSTT-----TCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEET
T ss_pred cCceEEEE---EECCCCCCcccEEEeCCCeEEEECCCCC-----CCEEEEEECCCCCEEEEEe---cCCCcceEEEEEeC
Confidence 35555655 34443 23 5666655 79999877432 2789999999888644333 22333445677788
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEE-EcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWT-LLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++||+..- ..+.+++||+.+.+-. .++ .+ .| .+..++.-++++|+.-| .+.+..+|+.+.+-
T Consensus 76 ~~lyv~t~------~~~~v~viD~~t~~v~~~i~-~g-~~---~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v 138 (266)
T 2iwa_A 76 EKLYQVVW------LKNIGFIYDRRTLSNIKNFT-HQ-MK---DGWGLATDGKILYGSDG------TSILYEIDPHTFKL 138 (266)
T ss_dssp TEEEEEET------TCSEEEEEETTTTEEEEEEE-CC-SS---SCCEEEECSSSEEEECS------SSEEEEECTTTCCE
T ss_pred CEEEEEEe------cCCEEEEEECCCCcEEEEEE-CC-CC---CeEEEEECCCEEEEECC------CCeEEEEECCCCcE
Confidence 99999853 3478999999876432 222 11 12 23445555678998754 26899999998764
Q ss_pred EEecCCCCCCCCCC-CcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCC---------CCCcceeEEEEE
Q 020245 162 IQYPSAGENCKGRG-GPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEK---------PTARSVFSTVGI 231 (329)
Q Consensus 162 ~~~~~~~~~~~~~~-~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~---------p~~r~~~~~~~~ 231 (329)
...-.....+.+.. -..+...++++|+--.. .+.+.+.|+++.+-...-..+.+ +..-..++++..
T Consensus 139 ~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 139 IKKHNVKYNGHRVIRLNELEYINGEVWANIWQ----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEEECEETTEECCCEEEEEEETTEEEEEETT----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EEEEEECCCCcccccceeEEEECCEEEEecCC----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 33332211111111 12333448888875432 37999999988865443321100 111122444444
Q ss_pred --CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 232 --GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 232 --~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
++.+||.|+. ...++..++...
T Consensus 215 ~~~~~lfVTgk~--------------~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKL--------------WPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETT--------------CSEEEEEEEEEC
T ss_pred CCCCEEEEECCC--------------CCeEEEEEEecc
Confidence 4589998875 457777776554
No 24
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.04 E-value=0.0029 Score=55.36 Aligned_cols=195 Identities=12% Similarity=0.020 Sum_probs=101.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.++.. ..+.+||+.+.+...................+.+ ++++++.++.+ ..+..||+.
T Consensus 133 ~~~~~~~~~~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~ 199 (433)
T 3bws_A 133 NTRLAIPLLED-------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLK 199 (433)
T ss_dssp SSEEEEEBTTS-------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETT
T ss_pred CCeEEEEeCCC-------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECC
Confidence 56788777632 5699999998776543321101111111222333 57888887654 478999988
Q ss_pred CCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGK 185 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (329)
+.+....-.. ...........- +..+|+.+..+ ..+..||+.+.+........ .....++.. +++
T Consensus 200 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~g~ 266 (433)
T 3bws_A 200 TLAYKATVDL---TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKTDKI-----GLPRGLLLSKDGK 266 (433)
T ss_dssp TCCEEEEEEC---SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEECCCC-----SEEEEEEECTTSS
T ss_pred CceEEEEEcC---CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEecCC-----CCceEEEEcCCCC
Confidence 7654322211 111111122222 34566665433 47899999988765443321 112222332 454
Q ss_pred EEEEeeeCCCC----cccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeecee
Q 020245 186 IWVVYGFAGVE----VDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGEL 259 (329)
Q Consensus 186 l~v~gG~~~~~----~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 259 (329)
.+++++..... -..+..||+.+.+-...... +. ....++.. ++.+|+.++. ...+
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---~~--~~~~~~~~~~g~~l~~~~~~--------------~~~v 327 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP---PG--NKRHIVSGNTENKIYVSDMC--------------CSKI 327 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE---EE--CEEEEEECSSTTEEEEEETT--------------TTEE
T ss_pred EEEEEECCCCccccCCCeEEEEECCCCcEEeeccC---CC--CcceEEECCCCCEEEEEecC--------------CCEE
Confidence 55555443221 24788999987654433211 11 11122222 3367777653 2478
Q ss_pred EEEEcCCcee
Q 020245 260 YSLDTETLVW 269 (329)
Q Consensus 260 ~~~d~~~~~W 269 (329)
.+||+.+.+-
T Consensus 328 ~v~d~~~~~~ 337 (433)
T 3bws_A 328 EVYDLKEKKV 337 (433)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCCCcE
Confidence 8999886643
No 25
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.04 E-value=0.003 Score=50.59 Aligned_cols=200 Identities=10% Similarity=0.013 Sum_probs=121.4
Q ss_pred CcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeE
Q 020245 73 RVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLW 152 (329)
Q Consensus 73 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 152 (329)
-+-+.....++.||+-.|.. ..+.+..+|+.+++-..--.. |..-.+..++..+++||+..... +.++
T Consensus 21 ~ftqGL~~~~~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw~~-----~~v~ 88 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGET----GRSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTWRN-----HEGF 88 (243)
T ss_dssp CCEEEEEEETTEEEEEECCT----TSCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSS-----SEEE
T ss_pred cccccEEEECCEEEEECCCC----CCceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEeeC-----CEEE
Confidence 34456777889999988764 246899999999877655555 34456677788899999985432 6899
Q ss_pred EEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCc-ceeEEEEE
Q 020245 153 GFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTAR-SVFSTVGI 231 (329)
Q Consensus 153 ~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r-~~~~~~~~ 231 (329)
+||+.+.+-..--+. +...-.++.-++++|+.-|. +.++.+|+++.+-..-..-..-+.+. .-.-+...
T Consensus 89 v~D~~tl~~~~ti~~-----~~~Gwglt~dg~~L~vSdgs-----~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 89 VYDLATLTPRARFRY-----PGEGWALTSDDSHLYMSDGT-----AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp EEETTTTEEEEEEEC-----SSCCCEEEECSSCEEEECSS-----SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEECCcCcEEEEEeC-----CCCceEEeeCCCEEEEECCC-----CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe
Confidence 999998764443333 22345566566778887652 68999999887654322211111221 11234455
Q ss_pred CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce---eEeecCCC-CCCCCCCCCCcceecccccCCcceEEEEcCC
Q 020245 232 GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV---WTRWDDGP-GSDHHPGPRGWCAFAGGLRGGKHGLLVYGGN 307 (329)
Q Consensus 232 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~-~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~ 307 (329)
+++||+---. .+.|.+.|+++.+ |-.+..+. .......+....-.+.+...+.++|||.|-+
T Consensus 159 ~G~lyanvw~--------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 159 NGELLANVWL--------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT--------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECC--------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 8888865432 4689999998764 33333200 0000001111122456665544779999976
Q ss_pred C
Q 020245 308 S 308 (329)
Q Consensus 308 ~ 308 (329)
.
T Consensus 225 w 225 (243)
T 3mbr_X 225 W 225 (243)
T ss_dssp C
T ss_pred C
Confidence 5
No 26
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.98 E-value=0.0018 Score=52.41 Aligned_cols=158 Identities=13% Similarity=0.030 Sum_probs=101.3
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEE
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
..+...++.||+..|.. ..+.++|+.+.+-.... ++....+..++..+++||+..... +.+++
T Consensus 58 qGL~~~~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~~------~~v~V 120 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ-------GTLRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWTE------GLLFT 120 (268)
T ss_dssp EEEEEETTEEEEEETTT-------TEEEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESSS------CEEEE
T ss_pred ceEEEECCEEEEEcCCC-------CEEEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEccC------CEEEE
Confidence 45555688999999864 34889999988753322 223334456777889999985543 78999
Q ss_pred EECCCCcEE-EcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC-cEEEE
Q 020245 104 FDTRTNQWT-LLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG-PGLIV 181 (329)
Q Consensus 104 ~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~~ 181 (329)
||+.+.+-. .++.. -.+.+++..++++|+.-|. +.+..+|+.+.+-...-.....+.+... ..+..
T Consensus 121 ~D~~Tl~~~~ti~~~------~eGwGLt~Dg~~L~vSdGs------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 121 WSGMPPQRERTTRYS------GEGWGLCYWNGKLVRSDGG------TMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp EETTTTEEEEEEECS------SCCCCEEEETTEEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EECCcCcEEEEEeCC------CceeEEecCCCEEEEECCC------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 999886543 33321 2345666678899998652 5799999998764433322111122211 22345
Q ss_pred ECCEEEEEeeeCCCCcccEEEEeCCCCceEEee
Q 020245 182 TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVE 214 (329)
Q Consensus 182 ~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~ 214 (329)
.++++|+--- ..+.+.+.|+++.+-...-
T Consensus 189 ~dG~lyanvw----~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 189 ANGVIYANIW----HSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp ETTEEEEEET----TCSEEEEECTTTCBEEEEE
T ss_pred eCCEEEEEEC----CCCeEEEEeCCCCcEEEEE
Confidence 5899886432 2379999999998765443
No 27
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=0.00094 Score=63.63 Aligned_cols=196 Identities=7% Similarity=0.040 Sum_probs=114.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++.|++ |.. ...+++||+.+.+++...... ++... -.+++.. ++.|++-.. ..+++||+.+
T Consensus 417 ~g~lWi-gt~-------~~Gl~~~~~~~~~~~~~~~~~-~~~~~-v~~i~~d~~g~lwigt~--------~Gl~~~~~~~ 478 (781)
T 3v9f_A 417 EGNLWF-GTY-------LGNISYYNTRLKKFQIIELEK-NELLD-VRVFYEDKNKKIWIGTH--------AGVFVIDLAS 478 (781)
T ss_dssp TSCEEE-EET-------TEEEEEECSSSCEEEECCSTT-TCCCC-EEEEEECTTSEEEEEET--------TEEEEEESSS
T ss_pred CCCEEE-Eec-------cCCEEEEcCCCCcEEEeccCC-CCCCe-EEEEEECCCCCEEEEEC--------CceEEEeCCC
Confidence 557777 322 156899999988887765321 11111 1222222 467877421 4699999999
Q ss_pred CcEEEcccCCC--CCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--CC
Q 020245 109 NQWTLLSNGDA--GPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--QG 184 (329)
Q Consensus 109 ~~W~~~~~~~~--~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~ 184 (329)
++|+....... .+.......+...++.|++..- . .-+++||+.+++++.+...... +.....+... ++
T Consensus 479 ~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~~~~~~l--~~~~i~~i~~d~~g 550 (781)
T 3v9f_A 479 KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G-----GGVGIYTPDMQLVRKFNQYEGF--CSNTINQIYRSSKG 550 (781)
T ss_dssp SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S-----SCEEEECTTCCEEEEECTTTTC--SCSCEEEEEECTTS
T ss_pred CeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C-----CCEEEEeCCCCeEEEccCCCCC--CCCeeEEEEECCCC
Confidence 88877654321 1111111112223667776421 1 2488999999999887653211 1111222222 46
Q ss_pred EEEEEeeeCCCCcccE-EEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEE
Q 020245 185 KIWVVYGFAGVEVDDV-HCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSL 262 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~-~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
.|++-.. .-+ .+||+.+.+++.......+|.... .+++.- ++.|++.+. +.+.+|
T Consensus 551 ~lWi~T~------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~----------------~Gl~~~ 607 (781)
T 3v9f_A 551 QMWLATG------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN----------------TGISCY 607 (781)
T ss_dssp CEEEEET------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS----------------SCEEEE
T ss_pred CEEEEEC------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC----------------CceEEE
Confidence 6776432 356 899999988888765444554433 233333 567877643 368899
Q ss_pred EcCCceeEeecC
Q 020245 263 DTETLVWTRWDD 274 (329)
Q Consensus 263 d~~~~~W~~~~~ 274 (329)
|+++.+++....
T Consensus 608 ~~~~~~~~~~~~ 619 (781)
T 3v9f_A 608 ITSKKCFYTYDH 619 (781)
T ss_dssp ETTTTEEEEECG
T ss_pred ECCCCceEEecc
Confidence 999999888764
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.96 E-value=0.0046 Score=49.95 Aligned_cols=195 Identities=9% Similarity=-0.053 Sum_probs=114.9
Q ss_pred eeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEE
Q 020245 76 VTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFD 155 (329)
Q Consensus 76 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 155 (329)
......++.||+-.|.. ..+.+.++|+.+.+-..--.. +..-.+..++..+++||+.-... +.+++||
T Consensus 46 qGL~~~~~~LyestG~~----g~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D 113 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLN----GRSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTWKN-----GLGFVWN 113 (262)
T ss_dssp EEEEEETTEEEEEEEET----TEEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSS-----SEEEEEE
T ss_pred ceEEEECCEEEEECCCC----CCceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEeeC-----CEEEEEE
Confidence 45555688999988764 245789999999876554444 33345566777899999985532 6899999
Q ss_pred cCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCC-cceeEEEEECCE
Q 020245 156 VVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTA-RSVFSTVGIGKH 234 (329)
Q Consensus 156 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~-r~~~~~~~~~~~ 234 (329)
+.+.+-..--+.+ .....++.-++.+|+.-|. +.++.+|+++.+-..-..-..-..+ +.-.-+...+++
T Consensus 114 ~~t~~~~~ti~~~-----~eG~glt~dg~~L~~SdGs-----~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~ 183 (262)
T 3nol_A 114 IRNLRQVRSFNYD-----GEGWGLTHNDQYLIMSDGT-----PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGE 183 (262)
T ss_dssp TTTCCEEEEEECS-----SCCCCEEECSSCEEECCSS-----SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTE
T ss_pred CccCcEEEEEECC-----CCceEEecCCCEEEEECCC-----CeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCE
Confidence 9987644333321 2334455556668876542 6899999988664432211110111 111123345888
Q ss_pred EEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce---eEeecCCCCCC--CCCCCCCcceecccccCCcceEEEEcCCC
Q 020245 235 IVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV---WTRWDDGPGSD--HHPGPRGWCAFAGGLRGGKHGLLVYGGNS 308 (329)
Q Consensus 235 i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~--~~p~~r~~~~~~~~~~~~~~~i~i~GG~~ 308 (329)
||+---. .+.|.+.|+++.+ |-.+..+.... ..+..-.. .+.+...+.+.+||.|-..
T Consensus 184 lyan~w~--------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl--NGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 184 IFANVWQ--------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL--NGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EEEEETT--------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE--EEEEEETTTTEEEEEETTC
T ss_pred EEEEEcc--------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCce--EEEEEcCCCCEEEEECCCC
Confidence 8864321 4689999998775 33332100000 01111122 5666665547799999765
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.0076 Score=51.74 Aligned_cols=228 Identities=17% Similarity=0.206 Sum_probs=124.8
Q ss_pred eEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCC----CCCCcceeEEEECCEEEEEccccCCCCCC
Q 020245 25 AITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDV----PPPRVGVTMAAVGHTIYMFGGRDGTHKEL 98 (329)
Q Consensus 25 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 98 (329)
+-++.+++||+.... ..+++||..+.+ |+.-...... .........+..++.||+... .
T Consensus 48 ~p~v~~~~v~~~~~~--------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------~ 112 (376)
T 3q7m_A 48 HPALADNVVYAADRA--------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------K 112 (376)
T ss_dssp CCEEETTEEEEECTT--------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------T
T ss_pred ccEEECCEEEEEcCC--------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------C
Confidence 455678899987541 579999997654 6543321100 012233445667889998643 2
Q ss_pred CceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEecCCCCCCCCC
Q 020245 99 NELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPSAGENCKGR 174 (329)
Q Consensus 99 ~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~~~~~~~~~ 174 (329)
..++.+|..+. .|+.-... ......+..++.+|+.... ..++.+|..+++ |+.....+.. ..+
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~------~~~~~p~~~~~~v~v~~~~------g~l~~~d~~tG~~~W~~~~~~~~~-~~~ 179 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAG------EALSRPVVSDGLVLIHTSN------GQLQALNEADGAVKWTVNLDMPSL-SLR 179 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSS------CCCSCCEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC------C
T ss_pred CEEEEEECCCCCEEEEEeCCC------ceEcCCEEECCEEEEEcCC------CeEEEEECCCCcEEEEEeCCCCce-eec
Confidence 47999999866 47653322 1122334457778775431 468999998875 8766543211 112
Q ss_pred CCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCC--ceEEeeccCCCCCCc--------ceeEEEEECCEEEEEcCccCC
Q 020245 175 GGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQVETSGEKPTAR--------SVFSTVGIGKHIVVYGGEVDP 244 (329)
Q Consensus 175 ~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~~~~~~~~p~~r--------~~~~~~~~~~~i~i~GG~~~~ 244 (329)
...+.+..++.+|+ |..+ ..++.+|+.+. .|+.-.. .|... .....+..++.+|+.+.
T Consensus 180 ~~~~~~~~~~~v~~-g~~~----g~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~---- 247 (376)
T 3q7m_A 180 GESAPTTAFGAAVV-GGDN----GRVSAVLMEQGQMIWQQRIS---QATGSTEIDRLSDVDTTPVVVNGVVFALAY---- 247 (376)
T ss_dssp CCCCCEEETTEEEE-CCTT----TEEEEEETTTCCEEEEEECC---C-----------CCCCCCEEETTEEEEECT----
T ss_pred CCCCcEEECCEEEE-EcCC----CEEEEEECCCCcEEEEEecc---cCCCCcccccccccCCCcEEECCEEEEEec----
Confidence 22334455777666 3221 47889998655 4655331 11110 11223345777877642
Q ss_pred CCCCcCCCCeeeceeEEEEcCCc--eeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEec
Q 020245 245 SDLGHLGAGKFAGELYSLDTETL--VWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTP 322 (329)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~ 322 (329)
...+.++|+++. .|+.-.. .. .+.++.+ +.+|+... + ..++.||+
T Consensus 248 -----------~g~l~~~d~~tG~~~w~~~~~-----------~~--~~~~~~~--~~l~~~~~-~------g~l~~~d~ 294 (376)
T 3q7m_A 248 -----------NGNLTALDLRSGQIMWKRELG-----------SV--NDFIVDG--NRIYLVDQ-N------DRVMALTI 294 (376)
T ss_dssp -----------TSCEEEEETTTCCEEEEECCC-----------CE--EEEEEET--TEEEEEET-T------CCEEEEET
T ss_pred -----------CcEEEEEECCCCcEEeeccCC-----------CC--CCceEEC--CEEEEEcC-C------CeEEEEEC
Confidence 236889998755 4654321 12 2334444 44777653 1 25677776
Q ss_pred ccC
Q 020245 323 CLD 325 (329)
Q Consensus 323 ~~~ 325 (329)
++.
T Consensus 295 ~tG 297 (376)
T 3q7m_A 295 DGG 297 (376)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.93 E-value=0.0015 Score=56.23 Aligned_cols=185 Identities=18% Similarity=0.189 Sum_probs=101.1
Q ss_pred EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
.+|+.++.+ +.+.++|+.+.+-....... . . -.+++.. +..||+.++.+ ..+..+|..++
T Consensus 3 ~l~vs~~~d-------~~v~v~d~~~~~~~~~~~~~---~-~-~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~ 64 (391)
T 1l0q_A 3 FAYIANSES-------DNISVIDVTSNKVTATIPVG---S-N-PMGAVISPDGTKVYVANAHS------NDVSIIDTATN 64 (391)
T ss_dssp EEEEEETTT-------TEEEEEETTTTEEEEEEECS---S-S-EEEEEECTTSSEEEEEEGGG------TEEEEEETTTT
T ss_pred EEEEEcCCC-------CEEEEEECCCCeEEEEeecC---C-C-cceEEECCCCCEEEEECCCC------CeEEEEECCCC
Confidence 567776642 67999999877654332211 1 1 1222222 33577776544 47999999887
Q ss_pred cEEEcccCCCCCCCcccceeEe-eCC-eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CC-E
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAA-DDR-HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QG-K 185 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~ 185 (329)
+....-..+ . .-..+.. -++ .|++.+..+ ..+.+||+.+++........ .....++.. ++ .
T Consensus 65 ~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 65 NVIATVPAG---S--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTG-----KSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEEEECS---S--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSE
T ss_pred eEEEEEECC---C--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCC-----CCcceEEECCCCCE
Confidence 655443331 1 1122222 234 455554322 56999999988765444331 112333333 34 4
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-C-CEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-G-KHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~-~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
+|+.++.+ ..+..||..+.+........ .....++.. + +.|++.++. ...+.++|
T Consensus 130 l~~~~~~~----~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~dg~~l~~~~~~--------------~~~v~~~d 186 (391)
T 1l0q_A 130 LYVTNNGD----KTVSVINTVTKAVINTVSVG-----RSPKGIAVTPDGTKVYVANFD--------------SMSISVID 186 (391)
T ss_dssp EEEEETTT----TEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSEEEEEETT--------------TTEEEEEE
T ss_pred EEEEeCCC----CEEEEEECCCCcEEEEEecC-----CCcceEEECCCCCEEEEEeCC--------------CCEEEEEE
Confidence 66666433 58999999887665543221 112233222 3 366666553 24688999
Q ss_pred cCCceeEee
Q 020245 264 TETLVWTRW 272 (329)
Q Consensus 264 ~~~~~W~~~ 272 (329)
+.+..-...
T Consensus 187 ~~~~~~~~~ 195 (391)
T 1l0q_A 187 TVTNSVIDT 195 (391)
T ss_dssp TTTTEEEEE
T ss_pred CCCCeEEEE
Confidence 987765443
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.91 E-value=0.0015 Score=56.31 Aligned_cols=225 Identities=16% Similarity=0.098 Sum_probs=115.5
Q ss_pred EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
.||+.++.. ..+.++|+.+.+........ . .-..++.. +..||+.+... ..+.+||+.++
T Consensus 45 ~l~~~~~~d-------~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~ 106 (391)
T 1l0q_A 45 KVYVANAHS-------NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSN 106 (391)
T ss_dssp EEEEEEGGG-------TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETTT------TEEEEEETTTT
T ss_pred EEEEECCCC-------CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECCC------CEEEEEECCCC
Confidence 566766532 67999999887754433321 1 11222222 34576665332 57999999987
Q ss_pred cEEEcccCCCCCCCcccceeEee-CC-eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CC-E
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAAD-DR-HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QG-K 185 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~ 185 (329)
+....-... ..-..+... ++ .+|+.++.+ ..+..||+.+.+........ .....++.. ++ .
T Consensus 107 ~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 107 TVAGTVKTG-----KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG-----RSPKGIAVTPDGTK 171 (391)
T ss_dssp EEEEEEECS-----SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSE
T ss_pred eEEEEEeCC-----CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC-----CCcceEEECCCCCE
Confidence 654433321 111222222 33 566665533 57999999988765554332 111233333 33 4
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
+|+.++.+ ..+..||+.+.+....... .....+++.. ++..+++++... ....+..||+
T Consensus 172 l~~~~~~~----~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~-----------~~~~v~~~d~ 231 (391)
T 1l0q_A 172 VYVANFDS----MSISVIDTVTNSVIDTVKV-----EAAPSGIAVNPEGTKAYVTNVDK-----------YFNTVSMIDT 231 (391)
T ss_dssp EEEEETTT----TEEEEEETTTTEEEEEEEC-----SSEEEEEEECTTSSEEEEEEECS-----------SCCEEEEEET
T ss_pred EEEEeCCC----CEEEEEECCCCeEEEEEec-----CCCccceEECCCCCEEEEEecCc-----------CCCcEEEEEC
Confidence 66665433 5789999987765443321 1112222222 344444443210 1257899999
Q ss_pred CCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 265 ETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 265 ~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
++.+-...-. ....- .+++...+.+.+|+.++.+ ..|.+||+++.
T Consensus 232 ~~~~~~~~~~--------~~~~~--~~~~~s~dg~~l~~s~~~d------~~v~v~d~~~~ 276 (391)
T 1l0q_A 232 GTNKITARIP--------VGPDP--AGIAVTPDGKKVYVALSFX------NTVSVIDTATN 276 (391)
T ss_dssp TTTEEEEEEE--------CCSSE--EEEEECTTSSEEEEEETTT------TEEEEEETTTT
T ss_pred CCCeEEEEEe--------cCCCc--cEEEEccCCCEEEEEcCCC------CEEEEEECCCC
Confidence 8764322221 11122 2333333314466666543 35777777654
No 32
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.86 E-value=0.0077 Score=49.46 Aligned_cols=228 Identities=9% Similarity=0.021 Sum_probs=117.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++.+|+.... ...+++||+. .+.+.+..+. ....-+.++.. ++.+|+.... ...+.++|+ +
T Consensus 67 ~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~ 128 (299)
T 2z2n_A 67 DGEVWFTENA-------ANKIGRITKK-GIIKEYTLPN---PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-D 128 (299)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-T
T ss_pred CCCEEEeCCC-------CCeEEEECCC-CcEEEEeCCC---cCCCceeeEECCCCCEEEEecC------CceEEEECC-C
Confidence 4577776432 1568899986 4555544221 11122333333 4678886432 357889998 6
Q ss_pred CcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKI 186 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l 186 (329)
.+........ ....-..++. -++++|+.... ...++++|+ +.+...+.... .......++.. ++.+
T Consensus 129 g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l 196 (299)
T 2z2n_A 129 GKIREYELPN---KGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPT---PASGPVGITKGNDDAL 196 (299)
T ss_dssp CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSSE
T ss_pred CCEEEecCCC---CCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCC---CCCcceeEEECCCCCE
Confidence 5555543221 1111223333 36688886421 146899998 77776653221 11112223332 4678
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
|+.... ...+.+||+ +.+........ ......+++.- ++.||+.... .+.+.+||+.
T Consensus 197 ~v~~~~----~~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~--------------~~~i~~~d~~ 254 (299)
T 2z2n_A 197 WFVEII----GNKIGRITT-SGEITEFKIPT---PNARPHAITAGAGIDLWFTEWG--------------ANKIGRLTSN 254 (299)
T ss_dssp EEEETT----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECSTTCEEEEETT--------------TTEEEEEETT
T ss_pred EEEccC----CceEEEECC-CCcEEEEECCC---CCCCceeEEECCCCCEEEeccC--------------CceEEEECCC
Confidence 876532 257899999 67766543211 11122233332 4578876421 2478999984
Q ss_pred CceeEeecCCCCCCCCCCC-CCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCCcc
Q 020245 266 TLVWTRWDDGPGSDHHPGP-RGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIE 328 (329)
Q Consensus 266 ~~~W~~~~~~~~~~~~p~~-r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~ 328 (329)
.....+.. +.. ..- .++++ .+ +.||+... .+.+.+|++++.+.|
T Consensus 255 -g~~~~~~~-------~~~~~~~--~~i~~-~~-g~l~v~~~-------~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 255 -NIIEEYPI-------QIKSAEP--HGICF-DG-ETIWFAME-------CDKIGKLTLIKDNME 299 (299)
T ss_dssp -TEEEEEEC-------SSSSCCE--EEEEE-CS-SCEEEEET-------TTEEEEEEEC-----
T ss_pred -CceEEEeC-------CCCCCcc--ceEEe-cC-CCEEEEec-------CCcEEEEEcCcccCC
Confidence 45555542 211 111 34444 43 55877653 147899999887653
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.86 E-value=0.0082 Score=49.57 Aligned_cols=233 Identities=11% Similarity=-0.023 Sum_probs=122.9
Q ss_pred EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECCCCc
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTRTNQ 110 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 110 (329)
.||+.+... ..+++||+.+. .+.+... ... -.+++. -++++|+.... ...+.+||+.+.+
T Consensus 41 ~l~~~~~~~-------~~i~~~~~~~~-~~~~~~~----~~~-~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 41 AVIFSDVRQ-------NRTWAWSDDGQ-LSPEMHP----SHH-QNGHCLNKQGHLIACSHG------LRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEGGG-------TEEEEEETTSC-EEEEESS----CSS-EEEEEECTTCCEEEEETT------TTEEEEECSTTCC
T ss_pred EEEEEeCCC-------CEEEEEECCCC-eEEEECC----CCC-cceeeECCCCcEEEEecC------CCeEEEEcCCCCc
Confidence 588877532 57999999987 5555432 111 122332 25678776421 2579999998888
Q ss_pred EEEcccCC-CCCCCcccceeEeeCCeEEEE----cccCC--------CcCcceeEEEEcCCCeEEEecCCCCCCCCCCCc
Q 020245 111 WTLLSNGD-AGPPHRSYHSTAADDRHVYIF----GGCGV--------SGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGP 177 (329)
Q Consensus 111 W~~~~~~~-~~p~~r~~~~~~~~~~~i~v~----GG~~~--------~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 177 (329)
.+.+.... ..+..+....++.-++++|+. |.... ......++++++. ++...+.... ....
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----~~~~ 175 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-----VKPN 175 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-----SSEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-----CCCc
Confidence 77654321 111112223334447788886 43110 1112478999887 5555543321 1112
Q ss_pred EEEE-ECCEEEEEeeeCCCCcccEEEEeCC-CCce-EEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCe
Q 020245 178 GLIV-TQGKIWVVYGFAGVEVDDVHCFDPA-HAQW-AQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGK 254 (329)
Q Consensus 178 ~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~-~~~w-~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~ 254 (329)
.++. -++++++.... ...+++|++. +.+. ...... ..........+.--++.||+..+
T Consensus 176 gi~~s~dg~~lv~~~~----~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~-------------- 236 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTG----DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASAG-------------- 236 (296)
T ss_dssp EEEECTTSCEEEEETT----TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEET--------------
T ss_pred cEEECCCCCEEEEeCC----CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEcC--------------
Confidence 2333 24666644322 2578899886 4444 111111 00111111122223567887662
Q ss_pred eeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccc-cCCcceEEEEcCCCCCCCcccceEEEecccCCccC
Q 020245 255 FAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGL-RGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDGIED 329 (329)
Q Consensus 255 ~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~-~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~~~~ 329 (329)
..|.+||++......+.. |.. . .+++. -++.+.||+... +.+|+|++++.+.++
T Consensus 237 --~~v~~~~~~g~~~~~~~~-------~~~-~---~~~~f~~~d~~~L~v~t~--------~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 237 --DGVHVLTPDGDELGRVLT-------PQT-T---SNLCFGGPEGRTLYMTVS--------TEFWSIETNVRGLEH 291 (296)
T ss_dssp --TEEEEECTTSCEEEEEEC-------SSC-C---CEEEEESTTSCEEEEEET--------TEEEEEECSCCBCCC
T ss_pred --CeEEEECCCCCEEEEEEC-------CCC-c---eeEEEECCCCCEEEEEcC--------CeEEEEEcccccccc
Confidence 368999998777666664 333 1 12222 122134666542 278999999988764
No 34
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.85 E-value=0.006 Score=58.22 Aligned_cols=187 Identities=12% Similarity=0.115 Sum_probs=106.6
Q ss_pred CceEEEeCCCCcEEEEeeCC-CCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCC---CCC
Q 020245 48 NNLHVFDLETLTWSVADVTG-DVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDA---GPP 122 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~---~p~ 122 (329)
..+++||+.+.+++...... .++... -.+++.. ++.|++-.. ..+++||+.+++|+....... .+.
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~-v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNEN-VYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVS 497 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSC-EEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCe-eEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccccccccCC
Confidence 56899999988887765421 111111 1222222 456777431 369999999999988764310 011
Q ss_pred CcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCC-CCCCCcEEEEE--CCEEEEEeeeCCCCccc
Q 020245 123 HRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENC-KGRGGPGLIVT--QGKIWVVYGFAGVEVDD 199 (329)
Q Consensus 123 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~--~~~l~v~gG~~~~~~~~ 199 (329)
..........++.|++... .-+++||+.++++ .+....... .+.....+... ++.+++-.. .-
T Consensus 498 ~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~------~G 563 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR------EG 563 (795)
T ss_dssp CCEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES------SC
T ss_pred ceEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC------CC
Confidence 1111122223667877532 2488999999888 544210000 11111222222 466776432 36
Q ss_pred EEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecC
Q 020245 200 VHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 200 ~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
+++||+.+.+++.......+|.... .+++.- ++.|++.+. ..+.+||+++.+++.+..
T Consensus 564 l~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~----------------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN----------------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp EEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET----------------TEEEEEETTTTEEEEECG
T ss_pred ceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC----------------CceEEEcCCCCcEEEcCC
Confidence 8999999999888765444554332 233222 457877653 468899999999887764
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.83 E-value=0.0096 Score=49.48 Aligned_cols=233 Identities=12% Similarity=0.113 Sum_probs=114.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||..+.+...... .....-..+.+ ++++++.|+.+ ..+..||..
T Consensus 34 ~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~ 95 (312)
T 4ery_A 34 NGEWLASSSAD-------KLIKIWGAYDGKFEKTIS-----GHKLGISDVAWSSDSNLLVSASDD------KTLKIWDVS 95 (312)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred CCCEEEEeeCC-------CeEEEEeCCCcccchhhc-----cCCCceEEEEEcCCCCEEEEECCC------CEEEEEECC
Confidence 45666666532 568888988776544322 11111222222 45666776654 468889988
Q ss_pred CCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKI 186 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l 186 (329)
+.+-...-.. ....-......-++.+++.|+.+ ..+..||+.+.+-...-.. ....-.++.. .++.+
T Consensus 96 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 96 SGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKTLPA----HSDPVSAVHFNRDGSL 163 (312)
T ss_dssp TCCEEEEEEC---CSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSE
T ss_pred CCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEEecC----CCCcEEEEEEcCCCCE
Confidence 7653222111 01111111222355677777765 3588899987764332221 1111122222 24667
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
++.|+.+ ..+..||..+.+........ ............++..++.|+. -..+..||+.+
T Consensus 164 l~~~~~d----~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~--------------d~~i~iwd~~~ 223 (312)
T 4ery_A 164 IVSSSYD----GLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATL--------------DNTLKLWDYSK 223 (312)
T ss_dssp EEEEETT----SCEEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEEEEET--------------TTEEEEEETTT
T ss_pred EEEEeCC----CcEEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEEEEcC--------------CCeEEEEECCC
Confidence 7777755 47888998776543322110 1111111111224566666654 24688899887
Q ss_pred ceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 267 LVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 267 ~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
..-...-. .......+........+ +.+++.|+.+. .|.+||+++.
T Consensus 224 ~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~l~sg~~dg------~i~vwd~~~~ 269 (312)
T 4ery_A 224 GKCLKTYT------GHKNEKYCIFANFSVTG-GKWIVSGSEDN------LVYIWNLQTK 269 (312)
T ss_dssp TEEEEEEC------SSCCSSSCCCEEEECSS-SCEEEECCTTS------CEEEEETTTC
T ss_pred CcEEEEEE------ecCCceEEEEEEEEeCC-CcEEEEECCCC------EEEEEECCCc
Confidence 65332221 01111110011112222 44777887653 4666666554
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.81 E-value=0.0085 Score=48.55 Aligned_cols=228 Identities=13% Similarity=0.063 Sum_probs=115.5
Q ss_pred CCEEEE-EcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYA-FGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~-~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
+++||+ .... .+.+.+||+.+......... ....-..++.. +++||+... ...+.+||+.
T Consensus 34 ~g~l~v~~~~~-------~~~i~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~ 95 (270)
T 1rwi_B 34 AGNVYVTSEGM-------YGRVVKLATGSTGTTVLPFN----GLYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAG 95 (270)
T ss_dssp TCCEEEEECSS-------SCEEEEECC-----EECCCC----SCCSCCCEEECTTCCEEEEET-------TTEEEEECTT
T ss_pred CCCEEEEccCC-------CCcEEEecCCCcccceEeeC----CcCCcceeEECCCCCEEEEcC-------CCEEEEEeCC
Confidence 557888 4332 26788999876654433221 11112233333 457888753 3479999988
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGK 185 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (329)
+.....+...+ ... -..++. -++++|+.... ...+.+++..+......... ....-..++. .+++
T Consensus 96 ~~~~~~~~~~~---~~~-p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 96 SNNQTVLPFDG---LNY-PEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFT----GLNDPDGVAVDNSGN 162 (270)
T ss_dssp CSCCEECCCCS---CSS-EEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCC----SCCSCCCEEECTTCC
T ss_pred CceEeeeecCC---cCC-CcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccc----cCCCceeEEEeCCCC
Confidence 77655443221 111 122332 36788887432 14678887666544333211 1111222333 3577
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
+|+..... ..+.+||.....-...... . . ....+++.- ++.||+.... ...+.+||+
T Consensus 163 l~v~~~~~----~~i~~~~~~~~~~~~~~~~-~--~-~~p~~i~~d~~g~l~v~~~~--------------~~~v~~~~~ 220 (270)
T 1rwi_B 163 VYVTDTDN----NRVVKLEAESNNQVVLPFT-D--I-TAPWGIAVDEAGTVYVTEHN--------------TNQVVKLLA 220 (270)
T ss_dssp EEEEEGGG----TEEEEECTTTCCEEECCCS-S--C-CSEEEEEECTTCCEEEEETT--------------TSCEEEECT
T ss_pred EEEEECCC----CEEEEEecCCCceEeeccc-C--C-CCceEEEECCCCCEEEEECC--------------CCcEEEEcC
Confidence 88875422 5789999877654433211 1 1 222333333 4478887542 246889998
Q ss_pred CCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCC
Q 020245 265 ETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDG 326 (329)
Q Consensus 265 ~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~ 326 (329)
....-..... .....- .++++..+ +.+|+....+ +.|.+|++...+
T Consensus 221 ~~~~~~~~~~-------~~~~~p--~~i~~~~~-g~l~v~~~~~------~~v~~~~~~~~~ 266 (270)
T 1rwi_B 221 GSTTSTVLPF-------TGLNTP--LAVAVDSD-RTVYVADRGN------DRVVKLTSLEHH 266 (270)
T ss_dssp TCSCCEECCC-------CSCSCE--EEEEECTT-CCEEEEEGGG------TEEEEECCCGGG
T ss_pred CCCcceeecc-------CCCCCc--eeEEECCC-CCEEEEECCC------CEEEEEcCCCcc
Confidence 7654333221 111111 33444333 5588876533 478888877654
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.0067 Score=51.63 Aligned_cols=192 Identities=10% Similarity=0.030 Sum_probs=98.6
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC----CEEEEEccccCCCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG----HTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
++++++.|+.+ ..+..||.....+..+.... .....-.++.+. +.+++.|+.+ ..+..||
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd 85 (379)
T 3jrp_A 22 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWK 85 (379)
T ss_dssp SSSEEEEEETT-------SCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEECC-------CcEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEE
Confidence 45666666542 56888888766666655432 122222333332 5666666654 4688899
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEee-C--CeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAAD-D--RHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT 182 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 182 (329)
..+.+|..+..... ....-.++... + +.+++.|+.+ ..+..||+.+..-....... .....-.++...
T Consensus 86 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~--~~~~~v~~~~~~ 156 (379)
T 3jrp_A 86 EENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIID--AHAIGVNSASWA 156 (379)
T ss_dssp EETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEE--CCTTCEEEEEEC
T ss_pred cCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEec--CCCCceEEEEEc
Confidence 99888766655521 11111222222 3 5677777754 46788888766211111110 011112222222
Q ss_pred --------------CCEEEEEeeeCCCCcccEEEEeCCCC--ceEEeeccCCCCCCcceeEEEEE--C---CEEEEEcCc
Q 020245 183 --------------QGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQVETSGEKPTARSVFSTVGI--G---KHIVVYGGE 241 (329)
Q Consensus 183 --------------~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~~~~~~~~p~~r~~~~~~~~--~---~~i~i~GG~ 241 (329)
++.+++.|+.+ ..+..||..+. .+..+.... .......++.+ + +.+++.|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp CCC----------CTTCEEEEEETT----SCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred CccccccccccCCCCCCEEEEEeCC----CeEEEEEecCCCcceeeEEEEe---cccCcEeEEEECCCCCCCCeEEEEeC
Confidence 46677777755 46777776443 344443211 11111222222 3 677777764
Q ss_pred cCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 242 VDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
+ ..+.+||+...
T Consensus 230 d--------------g~i~iwd~~~~ 241 (379)
T 3jrp_A 230 D--------------RTCIIWTQDNE 241 (379)
T ss_dssp T--------------SCEEEEEESST
T ss_pred C--------------CEEEEEeCCCC
Confidence 2 35777777665
No 38
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.78 E-value=0.014 Score=49.97 Aligned_cols=194 Identities=14% Similarity=0.187 Sum_probs=109.7
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCc
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNE 100 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 100 (329)
..+.+..++.||+... ...++.+|..+.+ |+.-... ....+.+..++.+|+... ...
T Consensus 96 ~~~~~~~~~~v~v~~~--------~g~l~a~d~~tG~~~W~~~~~~------~~~~~p~~~~~~v~v~~~-------~g~ 154 (376)
T 3q7m_A 96 SGGVTVSGGHVYIGSE--------KAQVYALNTSDGTVAWQTKVAG------EALSRPVVSDGLVLIHTS-------NGQ 154 (376)
T ss_dssp EEEEEEETTEEEEEET--------TSEEEEEETTTCCEEEEEECSS------CCCSCCEEETTEEEEECT-------TSE
T ss_pred ccCceEeCCEEEEEcC--------CCEEEEEECCCCCEEEEEeCCC------ceEcCCEEECCEEEEEcC-------CCe
Confidence 3445556889988543 1579999998665 6543221 112333556888887542 247
Q ss_pred eEEEECCCCc--EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC--eEEEecCCCCCC--CC-
Q 020245 101 LYSFDTRTNQ--WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR--KWIQYPSAGENC--KG- 173 (329)
Q Consensus 101 ~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~--~W~~~~~~~~~~--~~- 173 (329)
++.||..+.+ |+.-..... ...+.....+..++.+|+ |... ..+..+|+.+. .|+.-...+... ..
T Consensus 155 l~~~d~~tG~~~W~~~~~~~~-~~~~~~~~~~~~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 227 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDMPS-LSLRGESAPTTAFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDR 227 (376)
T ss_dssp EEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC---------
T ss_pred EEEEECCCCcEEEEEeCCCCc-eeecCCCCcEEECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCccccc
Confidence 9999998764 775543211 011222334445777766 3221 46899998876 477654331000 00
Q ss_pred --CCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCC--ceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCc
Q 020245 174 --RGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGH 249 (329)
Q Consensus 174 --~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~ 249 (329)
......+..++.+|+.+. + ..++.+|..+. .|+.-. +. ....+..++.||+...
T Consensus 228 ~~~~~~~p~~~~~~v~~~~~-~----g~l~~~d~~tG~~~w~~~~-----~~---~~~~~~~~~~l~~~~~--------- 285 (376)
T 3q7m_A 228 LSDVDTTPVVVNGVVFALAY-N----GNLTALDLRSGQIMWKREL-----GS---VNDFIVDGNRIYLVDQ--------- 285 (376)
T ss_dssp --CCCCCCEEETTEEEEECT-T----SCEEEEETTTCCEEEEECC-----CC---EEEEEEETTEEEEEET---------
T ss_pred ccccCCCcEEECCEEEEEec-C----cEEEEEECCCCcEEeeccC-----CC---CCCceEECCEEEEEcC---------
Confidence 022333456788887642 1 47889998765 455421 11 2345566888888753
Q ss_pred CCCCeeeceeEEEEcCCce--eEee
Q 020245 250 LGAGKFAGELYSLDTETLV--WTRW 272 (329)
Q Consensus 250 ~~~~~~~~~~~~~d~~~~~--W~~~ 272 (329)
...++++|.++.+ |+.-
T Consensus 286 ------~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 286 ------NDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp ------TCCEEEEETTTCCEEEEEC
T ss_pred ------CCeEEEEECCCCcEEEeec
Confidence 2468999987654 7653
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.74 E-value=0.0097 Score=49.67 Aligned_cols=224 Identities=13% Similarity=0.077 Sum_probs=113.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
+++.++.|+.+ ..+..||..+.+........ ........+.+ ++++++.|+.+ ..+..||..
T Consensus 108 ~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~ 171 (337)
T 1gxr_A 108 DGCTLIVGGEA-------STLSIWDLAAPTPRIKAELT---SSAPACYALAISPDSKVCFSCCSD------GNIAVWDLH 171 (337)
T ss_dssp TSSEEEEEESS-------SEEEEEECCCC--EEEEEEE---CSSSCEEEEEECTTSSEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCCcceeeecc---cCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCC
Confidence 44555555532 57889998877654333321 11111222222 44566666544 468899998
Q ss_pred CCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKI 186 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l 186 (329)
+.+....-.. ....-......-+++.++.|+.+ ..+..||+.+.+-...... .....++.. .+++.
T Consensus 172 ~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~-----~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 172 NQTLVRQFQG---HTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDF-----TSQIFSLGYCPTGEW 238 (337)
T ss_dssp TTEEEEEECC---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-----SSCEEEEEECTTSSE
T ss_pred CCceeeeeec---ccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecC-----CCceEEEEECCCCCE
Confidence 7754332211 11111112222256677777654 4689999988765443322 111222333 35667
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
+++++.+ ..+..||..+.+-..+.. ....-.++... ++.+++.++. ...+..||+.
T Consensus 239 l~~~~~~----~~i~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--------------dg~i~~~~~~ 295 (337)
T 1gxr_A 239 LAVGMES----SNVEVLHVNKPDKYQLHL-----HESCVLSLKFAYCGKWFVSTGK--------------DNLLNAWRTP 295 (337)
T ss_dssp EEEEETT----SCEEEEETTSSCEEEECC-----CSSCEEEEEECTTSSEEEEEET--------------TSEEEEEETT
T ss_pred EEEEcCC----CcEEEEECCCCCeEEEcC-----CccceeEEEECCCCCEEEEecC--------------CCcEEEEECC
Confidence 7777644 578889987765443321 11112222222 4566666664 2468888987
Q ss_pred CceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEec
Q 020245 266 TLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTP 322 (329)
Q Consensus 266 ~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~ 322 (329)
+..-..... ..... .+++...+ +..++.|+.+. .|.+|++
T Consensus 296 ~~~~~~~~~--------~~~~v--~~~~~s~~-~~~l~~~~~dg------~i~iw~~ 335 (337)
T 1gxr_A 296 YGASIFQSK--------ESSSV--LSCDISVD-DKYIVTGSGDK------KATVYEV 335 (337)
T ss_dssp TCCEEEEEE--------CSSCE--EEEEECTT-SCEEEEEETTS------CEEEEEE
T ss_pred CCeEEEEec--------CCCcE--EEEEECCC-CCEEEEecCCC------eEEEEEE
Confidence 765443221 11222 33333333 44777777543 4555554
No 40
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.74 E-value=0.017 Score=50.67 Aligned_cols=225 Identities=12% Similarity=0.048 Sum_probs=119.6
Q ss_pred EECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECC
Q 020245 28 IVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 28 ~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
..++..++.|+.+ ..+..||..+.+-...-. .....-.++..++.+++.|+.+ ..+..||..
T Consensus 140 ~~d~~~l~~g~~d-------g~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~ 201 (435)
T 1p22_A 140 QYDDQKIVSGLRD-------NTIKIWDKNTLECKRILT-----GHTGSVLCLQYDERVIITGSSD------STVRVWDVN 201 (435)
T ss_dssp ECCSSEEEEEESS-------SCEEEEESSSCCEEEEEC-----CCSSCEEEEECCSSEEEEEETT------SCEEEEESS
T ss_pred EECCCEEEEEeCC-------CeEEEEeCCCCeEEEEEc-----CCCCcEEEEEECCCEEEEEcCC------CeEEEEECC
Confidence 3466777777643 678899988765433221 1122223444577777777655 468889988
Q ss_pred CCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEe-cCCCCCCCCCCCcEEEEECCEE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQY-PSAGENCKGRGGPGLIVTQGKI 186 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~l 186 (329)
+.+-...-.. .......+...+..++.|+.+ ..+..||..+..-... .... .......++..++..
T Consensus 202 ~~~~~~~~~~-----h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 268 (435)
T 1p22_A 202 TGEMLNTLIH-----HCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLV---GHRAAVNVVDFDDKY 268 (435)
T ss_dssp SCCEEEEECC-----CCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEEC---CCSSCEEEEEEETTE
T ss_pred CCcEEEEEcC-----CCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEec---CCCCcEEEEEeCCCE
Confidence 7754322111 112223333455667777754 4688888876542211 1110 111222233346666
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
++.|+.+ ..+..||..+.+-...-. .......++..++.+++.|+.+ ..+..||+.+
T Consensus 269 l~s~~~d----g~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~g~~d--------------g~i~iwd~~~ 325 (435)
T 1p22_A 269 IVSASGD----RTIKVWNTSTCEFVRTLN-----GHKRGIACLQYRDRLVVSGSSD--------------NTIRLWDIEC 325 (435)
T ss_dssp EEEEETT----SEEEEEETTTCCEEEEEE-----CCSSCEEEEEEETTEEEEEETT--------------SCEEEEETTT
T ss_pred EEEEeCC----CeEEEEECCcCcEEEEEc-----CCCCcEEEEEeCCCEEEEEeCC--------------CeEEEEECCC
Confidence 7777654 578889987765433221 1111223344466677777642 4688899886
Q ss_pred ceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 267 LVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 267 ~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
..-...-. ..... ..++..++ ..++.|+.+. .|.+||+.+
T Consensus 326 ~~~~~~~~--------~h~~~--v~~~~~~~--~~l~sg~~dg------~i~vwd~~~ 365 (435)
T 1p22_A 326 GACLRVLE--------GHEEL--VRCIRFDN--KRIVSGAYDG------KIKVWDLVA 365 (435)
T ss_dssp CCEEEEEC--------CCSSC--EEEEECCS--SEEEEEETTS------CEEEEEHHH
T ss_pred CCEEEEEe--------CCcCc--EEEEEecC--CEEEEEeCCC------cEEEEECCC
Confidence 54222111 11111 23333454 3888888654 466666543
No 41
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.71 E-value=0.013 Score=47.42 Aligned_cols=192 Identities=10% Similarity=-0.021 Sum_probs=113.2
Q ss_pred eeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEE
Q 020245 76 VTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFD 155 (329)
Q Consensus 76 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 155 (329)
......++.||+-.|.. ..+..+|+.+++-..-- . +..-.+..++..+++||+..... +.+++||
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D 122 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTWTE-----GLLFTWS 122 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEESSS-----CEEEEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEccC-----CEEEEEE
Confidence 45666789999998866 23889999987643332 3 23345566777899999985432 6899999
Q ss_pred cCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCc-ceeEEEEECCE
Q 020245 156 VVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTAR-SVFSTVGIGKH 234 (329)
Q Consensus 156 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r-~~~~~~~~~~~ 234 (329)
+.+.+-..--+.+ .....++.-++.+|+.-|. +.++.+|+++.+-..-..-..-+.+. .-.-+...+++
T Consensus 123 ~~Tl~~~~ti~~~-----~eGwGLt~Dg~~L~vSdGs-----~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~ 192 (268)
T 3nok_A 123 GMPPQRERTTRYS-----GEGWGLCYWNGKLVRSDGG-----TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGV 192 (268)
T ss_dssp TTTTEEEEEEECS-----SCCCCEEEETTEEEEECSS-----SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTE
T ss_pred CCcCcEEEEEeCC-----CceeEEecCCCEEEEECCC-----CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCE
Confidence 9987654333332 2234555667788887652 68999999887654322111111111 11223345788
Q ss_pred EEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce---eEeecCC-CCCC--CCCCCCCcceecccccCCcceEEEEcCCC
Q 020245 235 IVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV---WTRWDDG-PGSD--HHPGPRGWCAFAGGLRGGKHGLLVYGGNS 308 (329)
Q Consensus 235 i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~-~~~~--~~p~~r~~~~~~~~~~~~~~~i~i~GG~~ 308 (329)
||+---. .+.|.+.|+++.+ |-.+..+ +... ..+..-.. .+.+...+.+.|||.|-+.
T Consensus 193 lyanvw~--------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vl--NGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 193 IYANIWH--------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVL--NGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp EEEEETT--------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCE--EEEEECTTTCCEEEEETTC
T ss_pred EEEEECC--------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCce--EEEEEcCCCCEEEEeCCCC
Confidence 8854321 4689999998774 3333310 0000 01111122 4555555446799998765
No 42
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.68 E-value=0.024 Score=49.75 Aligned_cols=224 Identities=15% Similarity=0.089 Sum_probs=115.1
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..+..||..+.+-..... .....-.++..++..++.|+.+ ..+..||..+.+-.. ... ......
T Consensus 219 g~i~~wd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~--~~~---~~~~~v 282 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLM-----GHVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLH--TLQ---GHTNRV 282 (445)
T ss_dssp SEEEEEESSSCCEEEEEE-----CCSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEE--EEC---CCSSCE
T ss_pred CEEEEEECCCCcEEEEEc-----CCcccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeE--Eec---CCCCce
Confidence 567788877655322211 1111223344466666666654 467888887654222 111 111122
Q ss_pred eeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCC
Q 020245 128 STAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 128 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
..+..++..++.|+.+ ..+..||..+.+-...-.. . .........++..++.|+.+ ..+..||..+
T Consensus 283 ~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~----~-~~~v~~~~~~~~~l~~~~~d----g~i~vwd~~~ 348 (445)
T 2ovr_B 283 YSLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHTLTG----H-QSLTSGMELKDNILVSGNAD----STVKIWDIKT 348 (445)
T ss_dssp EEEEECSSEEEEEETT-----SCEEEEETTTCCEEEEECC----C-CSCEEEEEEETTEEEEEETT----SCEEEEETTT
T ss_pred EEEEECCCEEEEEeCC-----CeEEEEECCCCCEEEEEcC----C-cccEEEEEEeCCEEEEEeCC----CeEEEEECCC
Confidence 2333477777777754 4688899988764332221 1 11222333455666777654 5788899876
Q ss_pred CceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe-ecCCCCCCCCCCCCC
Q 020245 208 AQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR-WDDGPGSDHHPGPRG 286 (329)
Q Consensus 208 ~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~~~~p~~r~ 286 (329)
.+-...-. ..........++..++.+++.|+.+ ..+..||+.+.+... +.. . ......
T Consensus 349 ~~~~~~~~--~~~~~~~~v~~~~~~~~~l~s~~~d--------------g~v~iwd~~~~~~~~~~~~---~--~~~~~~ 407 (445)
T 2ovr_B 349 GQCLQTLQ--GPNKHQSAVTCLQFNKNFVITSSDD--------------GTVKLWDLKTGEFIRNLVT---L--ESGGSG 407 (445)
T ss_dssp CCEEEEEC--STTSCSSCEEEEEECSSEEEEEETT--------------SEEEEEETTTCCEEEEEEE---C--TTGGGT
T ss_pred CcEEEEEc--cCCCCCCCEEEEEECCCEEEEEeCC--------------CeEEEEECCCCceeeeeec---c--ccCCCC
Confidence 55432221 1111122233445567777777642 468889988765432 211 0 001111
Q ss_pred cceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 287 WCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 287 ~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
..-.+++..++ +.+++.|+.++. ....+++||.+.+
T Consensus 408 ~~v~~~~~s~~-~~~la~~~~dg~--~~~~l~v~df~~~ 443 (445)
T 2ovr_B 408 GVVWRIRASNT-KLVCAVGSRNGT--EETKLLVLDFDVD 443 (445)
T ss_dssp CEEEEEEECSS-EEEEEEECSSSS--SCCEEEEEECCCC
T ss_pred ceEEEEEecCC-EEEEEEcccCCC--CccEEEEEECCCC
Confidence 11133334444 567788887653 3346778877654
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.66 E-value=0.015 Score=50.41 Aligned_cols=221 Identities=14% Similarity=0.073 Sum_probs=107.1
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..+..||..+.+...... .....-.++..++.+++.|+.+ ..+..||..+..-....... ....-.
T Consensus 156 g~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~---~~~~v~ 221 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMA-----GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQG---HSSEVC 221 (401)
T ss_dssp SCEEEEETTTCCEEEEEC-----CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC---CSSCEE
T ss_pred CeEEEEECcCCeEEEEec-----CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcC---CCCCee
Confidence 467778877665332221 1112223334455666666654 57888888743211111111 111111
Q ss_pred eeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEEe
Q 020245 128 STA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCFD 204 (329)
Q Consensus 128 ~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d 204 (329)
++. .-++.+++.|+.+ ..+..||+.+.+-...... ....-.++... +..+++.|+.. .-..+..||
T Consensus 222 ~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs--~d~~i~i~d 290 (401)
T 4aez_A 222 GLAWRSDGLQLASGGND-----NVVQIWDARSSIPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGT--MDKQIHFWN 290 (401)
T ss_dssp EEEECTTSSEEEEEETT-----SCEEEEETTCSSEEEEECC----CSSCCCEEEECTTSTTEEEEECCT--TTCEEEEEE
T ss_pred EEEEcCCCCEEEEEeCC-----CeEEEccCCCCCccEEecC----CcceEEEEEECCCCCCEEEEecCC--CCCEEEEEE
Confidence 122 2266777777754 4688999987654332221 12222333333 34577776421 115788899
Q ss_pred CCCCceEEeeccCCCCCCcceeEEEEE-CC-EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCC
Q 020245 205 PAHAQWAQVETSGEKPTARSVFSTVGI-GK-HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHP 282 (329)
Q Consensus 205 ~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~-~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p 282 (329)
..+.+-...... ...-.+++.. ++ .+++.+|.. ...+.+||+.+.....+...+ ..
T Consensus 291 ~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~g~~-------------dg~i~v~~~~~~~~~~~~~~~----~h 348 (401)
T 4aez_A 291 AATGARVNTVDA-----GSQVTSLIWSPHSKEIMSTHGFP-------------DNNLSIWSYSSSGLTKQVDIP----AH 348 (401)
T ss_dssp TTTCCEEEEEEC-----SSCEEEEEECSSSSEEEEEECTT-------------TCEEEEEEEETTEEEEEEEEE----CC
T ss_pred CCCCCEEEEEeC-----CCcEEEEEECCCCCeEEEEeecC-------------CCcEEEEecCCccceeEEEec----CC
Confidence 877654433211 1111222222 33 555554532 246888888876665543200 01
Q ss_pred CCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 283 GPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 283 ~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
..+. .+++...+ +.+++.||.++ .|.+|++.+.
T Consensus 349 ~~~v---~~~~~s~d-g~~l~s~~~dg------~i~iw~~~~~ 381 (401)
T 4aez_A 349 DTRV---LYSALSPD-GRILSTAASDE------NLKFWRVYDG 381 (401)
T ss_dssp SSCC---CEEEECTT-SSEEEEECTTS------EEEEEECCC-
T ss_pred CCCE---EEEEECCC-CCEEEEEeCCC------cEEEEECCCC
Confidence 1222 22233333 44778887653 5666776553
No 44
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.61 E-value=0.024 Score=47.83 Aligned_cols=215 Identities=11% Similarity=0.186 Sum_probs=113.7
Q ss_pred eeEEeccCCCCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEE-EECCEE
Q 020245 7 TWIKLDQKGSGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMA-AVGHTI 85 (329)
Q Consensus 7 ~W~~~~~~~~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~i 85 (329)
+|+++..... .......+++..++.+|+.|-. ..+++-+-...+|+.+.....+|.. ...++ .-++.+
T Consensus 67 tW~~~~~~~~-~~~~~~~~i~~~~~~~~~~g~~--------g~i~~S~DgG~tW~~~~~~~~~~~~--~~~i~~~~~~~~ 135 (327)
T 2xbg_A 67 TWEPRTLVLD-HSDYRFNSVSFQGNEGWIVGEP--------PIMLHTTDGGQSWSQIPLDPKLPGS--PRLIKALGNGSA 135 (327)
T ss_dssp SCEECCCCCS-CCCCEEEEEEEETTEEEEEEET--------TEEEEESSTTSSCEECCCCTTCSSC--EEEEEEEETTEE
T ss_pred CCeECCCCCC-CCCccEEEEEecCCeEEEEECC--------CeEEEECCCCCCceECccccCCCCC--eEEEEEECCCCE
Confidence 7988864211 1122344555556788887521 3455544446789988754222221 22333 346788
Q ss_pred EEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcC-CCeEEE
Q 020245 86 YMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVV-DRKWIQ 163 (329)
Q Consensus 86 yv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~-~~~W~~ 163 (329)
|+.|... .+++-+-...+|+++.... ....+.+... ++.++++|-. ..+++-+.. -.+|+.
T Consensus 136 ~~~~~~g-------~v~~S~DgG~tW~~~~~~~----~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 136 EMITNVG-------AIYRTKDSGKNWQALVQEA----IGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEP 198 (327)
T ss_dssp EEEETTC-------CEEEESSTTSSEEEEECSC----CCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEE
T ss_pred EEEeCCc-------cEEEEcCCCCCCEEeecCC----CcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeE
Confidence 8876421 3555444467899887531 2222333333 5566666532 235554433 578998
Q ss_pred ecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCC-CCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcC
Q 020245 164 YPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPA-HAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGG 240 (329)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~-~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG 240 (329)
+... .....+.++. .++.+|+.+.. ..+++.+.+ ..+|+.+... .++.....+.++.. ++.+|++|+
T Consensus 199 ~~~~----~~~~~~~~~~~~~g~~~~~~~~-----G~~~~s~~D~G~tW~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 199 HNRT----TSRRLHNMGFTPDGRLWMIVNG-----GKIAFSDPDNSENWGELLSP-LRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EECC----SSSCEEEEEECTTSCEEEEETT-----TEEEEEETTEEEEECCCBCT-TSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCCC----CCCccceeEECCCCCEEEEeCC-----ceEEEecCCCCCeeEeccCC-cccCCcceEEEEecCCCEEEEEeC
Confidence 8543 2333344443 35678876531 235554333 5688876531 12222223333333 568888876
Q ss_pred ccCCCCCCcCCCCeeeceeEEEEcCCceeEeecC
Q 020245 241 EVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
. ..+++-.-...+|+.+..
T Consensus 269 ~---------------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 269 A---------------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp T---------------TCEEEESSTTSSCEECGG
T ss_pred C---------------CeEEEeCCCCcccEEcCc
Confidence 2 235554445679998874
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.55 E-value=0.027 Score=46.88 Aligned_cols=228 Identities=12% Similarity=0.081 Sum_probs=114.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcE----EEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTW----SVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W----~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
++++++.|+ + ..+..||..+... ..+... .... .-..+.+ ++++++.|+.+ ..+..
T Consensus 62 ~~~~l~~~~-d-------g~i~iw~~~~~~~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~l~~~~~d------~~i~~ 123 (337)
T 1gxr_A 62 PTRHVYTGG-K-------GCVKVWDISHPGNKSPVSQLDCL---NRDN-YIRSCKLLPDGCTLIVGGEA------STLSI 123 (337)
T ss_dssp SSSEEEEEC-B-------SEEEEEETTSTTCCSCSEEEECS---CTTS-BEEEEEECTTSSEEEEEESS------SEEEE
T ss_pred CCcEEEEcC-C-------CeEEEEECCCCCceeeeeccccc---CCCC-cEEEEEEcCCCCEEEEEcCC------CcEEE
Confidence 456666665 2 5688888875432 222211 1111 1222222 34566666544 47889
Q ss_pred EECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-
Q 020245 104 FDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT- 182 (329)
Q Consensus 104 ~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~- 182 (329)
||..+.+......... ....-......-+++.++.|+.+ ..+..||+.+.+....-.. ....-.++...
T Consensus 124 ~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~~~~----~~~~i~~~~~~~ 193 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTS-SAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQG----HTDGASCIDISN 193 (337)
T ss_dssp EECCCC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEECT
T ss_pred EECCCCCcceeeeccc-CCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeeeeec----ccCceEEEEECC
Confidence 9998876443333210 01111111222256677777654 4588999988765443322 11122223332
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEE-ECCEEEEEcCccCCCCCCcCCCCeeeceeEE
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVG-IGKHIVVYGGEVDPSDLGHLGAGKFAGELYS 261 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 261 (329)
++..++.++.+ ..+..||+.+.+-..... ......++.. .++.++++|+. ...+..
T Consensus 194 ~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~--------------~~~i~~ 250 (337)
T 1gxr_A 194 DGTKLWTGGLD----NTVRSWDLREGRQLQQHD-----FTSQIFSLGYCPTGEWLAVGME--------------SSNVEV 250 (337)
T ss_dssp TSSEEEEEETT----SEEEEEETTTTEEEEEEE-----CSSCEEEEEECTTSSEEEEEET--------------TSCEEE
T ss_pred CCCEEEEEecC----CcEEEEECCCCceEeeec-----CCCceEEEEECCCCCEEEEEcC--------------CCcEEE
Confidence 56677777644 578899987765433321 1111222222 25566666653 246888
Q ss_pred EEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 262 LDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 262 ~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
||+.+..-..+.. . .... .++....+ +.+++.|+.+. .|.+||+.+.
T Consensus 251 ~~~~~~~~~~~~~-------~-~~~v--~~~~~~~~-~~~l~~~~~dg------~i~~~~~~~~ 297 (337)
T 1gxr_A 251 LHVNKPDKYQLHL-------H-ESCV--LSLKFAYC-GKWFVSTGKDN------LLNAWRTPYG 297 (337)
T ss_dssp EETTSSCEEEECC-------C-SSCE--EEEEECTT-SSEEEEEETTS------EEEEEETTTC
T ss_pred EECCCCCeEEEcC-------C-ccce--eEEEECCC-CCEEEEecCCC------cEEEEECCCC
Confidence 9988765444332 1 1111 23333333 44777777543 4666666543
No 46
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.52 E-value=0.031 Score=46.98 Aligned_cols=241 Identities=11% Similarity=0.021 Sum_probs=117.7
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+.+|+....... ......++++|+.+.+........ . . .+.++.. ++.+|+.+... ..+..+|+.+
T Consensus 53 ~~l~~~~~~~~~-~~~~~~v~~~d~~~~~~~~~~~~~---~-~-~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~ 120 (353)
T 3vgz_A 53 NALWLATSQSRK-LDKGGVVYRLDPVTLEVTQAIHND---L-K-PFGATINNTTQTLWFGNTVN------SAVTAIDAKT 120 (353)
T ss_dssp TEEEEEECCCTT-TEESEEEEEECTTTCCEEEEEEES---S-C-CCSEEEETTTTEEEEEETTT------TEEEEEETTT
T ss_pred CEEEEEcCCCcC-CCCCccEEEEcCCCCeEEEEEecC---C-C-cceEEECCCCCEEEEEecCC------CEEEEEeCCC
Confidence 477776532111 111368999999887654333221 1 1 1223332 34688876433 4799999988
Q ss_pred CcEEEcccCCCCCC-----CcccceeEe-e-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE
Q 020245 109 NQWTLLSNGDAGPP-----HRSYHSTAA-D-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV 181 (329)
Q Consensus 109 ~~W~~~~~~~~~p~-----~r~~~~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 181 (329)
.+-...-..+.... +..-..++. - ++.+|+.+.... ..++.+|+.+.+-....+.. ..........
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~----~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~s 193 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE----SVIWVVDGGNIKLKTAIQNT---GKMSTGLALD 193 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS----CEEEEEETTTTEEEEEECCC---CTTCCCCEEE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC----ceEEEEcCCCCceEEEecCC---CCccceEEEC
Confidence 76432222211011 011122222 2 346776653221 56999999988755444321 1111112222
Q ss_pred ECC-EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeece
Q 020245 182 TQG-KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGE 258 (329)
Q Consensus 182 ~~~-~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~ 258 (329)
.++ .+|+... + ..+..+|..+.+-......+.........+++.. ++.+|+.... ...
T Consensus 194 ~dg~~l~~~~~-~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------------~~~ 254 (353)
T 3vgz_A 194 SEGKRLYTTNA-D----GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--------------AAE 254 (353)
T ss_dssp TTTTEEEEECT-T----SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--------------SSE
T ss_pred CCCCEEEEEcC-C----CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--------------CCE
Confidence 344 4555432 2 5788999987765433322111111122223333 3467666432 257
Q ss_pred eEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCC
Q 020245 259 LYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDG 326 (329)
Q Consensus 259 ~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~ 326 (329)
++++|+++.+....-. .+.+. +++...+.+.+|+....+ ..|.++|+++.+
T Consensus 255 v~~~d~~~~~~~~~~~------~~~~~-----~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~ 305 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVA------APESL-----AVLFNPARNEAYVTHRQA------GKVSVIDAKSYK 305 (353)
T ss_dssp EEEEETTTCCEEEEEE------CSSCC-----CEEEETTTTEEEEEETTT------TEEEEEETTTTE
T ss_pred EEEEECCCCcEEEEEE------cCCCc-----eEEECCCCCEEEEEECCC------CeEEEEECCCCe
Confidence 9999998766433322 12221 222222214466665432 367788876543
No 47
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.52 E-value=0.011 Score=56.14 Aligned_cols=179 Identities=9% Similarity=0.071 Sum_probs=101.2
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCC--CCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEEC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGD--VPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~--~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
++.|++... ..+++||+.+.+|+....... ++.... .+++. -++.|++-. . ...+++||+
T Consensus 460 ~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~~g~lWigt-~------~~Gl~~~~~ 522 (781)
T 3v9f_A 460 NKKIWIGTH---------AGVFVIDLASKKVIHHYDTSNSQLLENFV-RSIAQDSEGRFWIGT-F------GGGVGIYTP 522 (781)
T ss_dssp TSEEEEEET---------TEEEEEESSSSSCCEEECTTTSSCSCSCE-EEEEECTTCCEEEEE-S------SSCEEEECT
T ss_pred CCCEEEEEC---------CceEEEeCCCCeEEecccCccccccccee-EEEEEcCCCCEEEEE-c------CCCEEEEeC
Confidence 457777432 468999999988877654221 111111 12222 245677642 1 135899999
Q ss_pred CCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCccee-EEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECC
Q 020245 107 RTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDL-WGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQG 184 (329)
Q Consensus 107 ~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~ 184 (329)
.+++++........|...-...+...++.|++... .-+ .+||+.+++++........+.... .+++. .++
T Consensus 523 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g 594 (781)
T 3v9f_A 523 DMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNG 594 (781)
T ss_dssp TCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSS
T ss_pred CCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCC
Confidence 99998887653222222222222223567777532 235 889999888877764322222222 23333 357
Q ss_pred EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCccee-EEEEE-CCEEEEEcC
Q 020245 185 KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVF-STVGI-GKHIVVYGG 240 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~-~~~~~-~~~i~i~GG 240 (329)
.|++.+. .-+.+|++++.+++.......++...... +++.. ++.||+ |+
T Consensus 595 ~lW~~t~------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~ 645 (781)
T 3v9f_A 595 NIWASTN------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GS 645 (781)
T ss_dssp CEEEECS------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EE
T ss_pred CEEEEcC------CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEE-EC
Confidence 7887643 46899999999998877654555444333 33333 445555 55
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.52 E-value=0.03 Score=48.72 Aligned_cols=228 Identities=10% Similarity=-0.035 Sum_probs=113.4
Q ss_pred ceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCC--CCCCcc
Q 020245 49 NLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDA--GPPHRS 125 (329)
Q Consensus 49 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~--~p~~r~ 125 (329)
.++.+|+.+..++.+.... ......+++. -++.+++.++.+ ..+..+|+.+.+......... .+...-
T Consensus 102 ~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v 172 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFK---TGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFV 172 (433)
T ss_dssp CEEECCBTTCSEEEEEEEE---CSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEE
T ss_pred EEEEECCCCCcceEEEEEc---CCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCce
Confidence 7888888776665554421 1111112222 267888877544 469999999887665332210 011111
Q ss_pred cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-C-CEEEEEeeeCCCCcccEEEE
Q 020245 126 YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-Q-GKIWVVYGFAGVEVDDVHCF 203 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~-~~l~v~gG~~~~~~~~~~~~ 203 (329)
......-++++++.++.+ ..+..||+.+.+....... ......+++.. + ..+|+.+..+ ..+..|
T Consensus 173 ~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~----~~i~~~ 239 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWIS----EDISVI 239 (433)
T ss_dssp EEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETTT----TEEEEE
T ss_pred eEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecCC----CcEEEE
Confidence 111222367888877643 4789999988654333221 12222233333 3 3466665433 478999
Q ss_pred eCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCC
Q 020245 204 DPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHP 282 (329)
Q Consensus 204 d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p 282 (329)
|+.+.+...... ......+++.. ++..+++++....... ..-..+..||+.+.+-...-. .+
T Consensus 240 d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~~------~~dg~i~~~d~~~~~~~~~~~------~~ 302 (433)
T 3bws_A 240 DRKTKLEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQE------SGGGRLGIYSMDKEKLIDTIG------PP 302 (433)
T ss_dssp ETTTTEEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTTC------SCCEEEEEEETTTTEEEEEEE------EE
T ss_pred ECCCCcEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCccc------cCCCeEEEEECCCCcEEeecc------CC
Confidence 998776543321 11122233222 4444445543221100 012478899998765433321 11
Q ss_pred CCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 283 GPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 283 ~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
. .. .+++...+.+.+|+.++.+ ..|.+||+++.
T Consensus 303 ~--~~--~~~~~~~~g~~l~~~~~~~------~~v~v~d~~~~ 335 (433)
T 3bws_A 303 G--NK--RHIVSGNTENKIYVSDMCC------SKIEVYDLKEK 335 (433)
T ss_dssp E--CE--EEEEECSSTTEEEEEETTT------TEEEEEETTTT
T ss_pred C--Cc--ceEEECCCCCEEEEEecCC------CEEEEEECCCC
Confidence 1 11 2222333213577776543 25777777654
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.50 E-value=0.018 Score=50.53 Aligned_cols=185 Identities=10% Similarity=0.081 Sum_probs=99.0
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
.++.+++.|+.+ ..+..||..+.+-..... .....-.++.+.+..++.|+.+ ..+..||..+
T Consensus 181 ~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~ 242 (435)
T 1p22_A 181 YDERVIITGSSD-------STVRVWDVNTGEMLNTLI-----HHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMAS 242 (435)
T ss_dssp CCSSEEEEEETT-------SCEEEEESSSCCEEEEEC-----CCCSCEEEEECCTTEEEEEETT------SCEEEEECSS
T ss_pred ECCCEEEEEcCC-------CeEEEEECCCCcEEEEEc-----CCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCC
Confidence 366666666642 568889988766432211 1122233344455566666654 4688888876
Q ss_pred CcEEE-cccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEE
Q 020245 109 NQWTL-LSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIW 187 (329)
Q Consensus 109 ~~W~~-~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~ 187 (329)
..-.. .... ........++..++..++.|+.+ ..+..||+.+.+-...-.. .. ....++..++..+
T Consensus 243 ~~~~~~~~~~---~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~----~~-~~v~~~~~~~~~l 309 (435)
T 1p22_A 243 PTDITLRRVL---VGHRAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVRTLNG----HK-RGIACLQYRDRLV 309 (435)
T ss_dssp SSCCEEEEEE---CCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEEEEEC----CS-SCEEEEEEETTEE
T ss_pred CCCceeeeEe---cCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEEEEcC----CC-CcEEEEEeCCCEE
Confidence 54211 1111 01112222333466666777654 4688999988754332221 11 1223334466677
Q ss_pred EEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 188 VVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 188 v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
+.|+.+ ..+..||..+.+-...-. .......++.+++..++.|+.+ ..+.++|+.+.
T Consensus 310 ~~g~~d----g~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~l~sg~~d--------------g~i~vwd~~~~ 366 (435)
T 1p22_A 310 VSGSSD----NTIRLWDIECGACLRVLE-----GHEELVRCIRFDNKRIVSGAYD--------------GKIKVWDLVAA 366 (435)
T ss_dssp EEEETT----SCEEEEETTTCCEEEEEC-----CCSSCEEEEECCSSEEEEEETT--------------SCEEEEEHHHH
T ss_pred EEEeCC----CeEEEEECCCCCEEEEEe-----CCcCcEEEEEecCCEEEEEeCC--------------CcEEEEECCCC
Confidence 777755 578889987664332221 1111223344477777777742 35788887654
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.49 E-value=0.027 Score=47.68 Aligned_cols=150 Identities=8% Similarity=0.036 Sum_probs=77.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++++++.|+.+ ..+..||..+.++..+..... ....-..++.. ++++++.|+.+ ..+..||..+
T Consensus 19 ~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN-------HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS-------SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEET
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCC
Confidence 55677777642 678999998887655554321 11111222222 45566666544 4688899888
Q ss_pred CcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe-EEEecCCCCCCCCCCCcEEEEE-CCE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK-WIQYPSAGENCKGRGGPGLIVT-QGK 185 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~-W~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (329)
.++....... .....-.++.. -++++++.|+.+ ..+..||..+.. |........ +....-.++... ++.
T Consensus 84 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 84 RTWKPTLVIL--RINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKK-PIRSTVLSLDWHPNSV 155 (372)
T ss_dssp TEEEEEEECC--CCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECT-TCCSCEEEEEECTTSS
T ss_pred CeeeeeEEee--cCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeec-ccCCCeeEEEEcCCCC
Confidence 8766544331 11111122222 256677777654 346666666543 322222210 112222233332 566
Q ss_pred EEEEeeeCCCCcccEEEEeCC
Q 020245 186 IWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~ 206 (329)
.++.|+.+ ..+..||..
T Consensus 156 ~l~~~~~d----g~i~~~d~~ 172 (372)
T 1k8k_C 156 LLAAGSCD----FKCRIFSAY 172 (372)
T ss_dssp EEEEEETT----SCEEEEECC
T ss_pred EEEEEcCC----CCEEEEEcc
Confidence 77777654 467778853
No 51
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.46 E-value=0.023 Score=46.16 Aligned_cols=232 Identities=9% Similarity=-0.036 Sum_probs=116.5
Q ss_pred CCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCC-CcEEEcccCCCCCCCcc
Q 020245 47 DNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRT-NQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 47 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~-~~W~~~~~~~~~p~~r~ 125 (329)
...++.+|+.+.+...+.... .........-+++.+++++ . ..++.+|..+ .+...+.... .....
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~----~~v~~~~~spdg~~l~~~~-~------~~i~~~d~~~~~~~~~~~~~~--~~~~~ 87 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP----ELFEAPNWSPDGKYLLLNS-E------GLLYRLSLAGDPSPEKVDTGF--ATICN 87 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES----SCCEEEEECTTSSEEEEEE-T------TEEEEEESSSCCSCEECCCTT--CCCBC
T ss_pred ceeEEEEeCCCCceeeeccCC----cceEeeEECCCCCEEEEEc-C------CeEEEEeCCCCCCceEecccc--ccccc
Confidence 378999999988876555421 1111112222455555543 1 3799999988 7766554331 11122
Q ss_pred cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCE-EEEEeeeCCCCcccEEEE
Q 020245 126 YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGK-IWVVYGFAGVEVDDVHCF 203 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-l~v~gG~~~~~~~~~~~~ 203 (329)
......-+++.+++++.... ....++.++..+.....+.... . ...+... +++ +++.+..++ ...+|.+
T Consensus 88 ~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~----~--~~~~~~spdg~~l~~~~~~~~--~~~l~~~ 158 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNL----P--SYWHGWSPDGKSFTYCGIRDQ--VFDIYSM 158 (297)
T ss_dssp SCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSS----S--EEEEEECTTSSEEEEEEEETT--EEEEEEE
T ss_pred cceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCC----C--ccceEECCCCCEEEEEECCCC--ceEEEEE
Confidence 22223335666666553222 2367888888877755554431 1 2222232 444 444454332 2467778
Q ss_pred eCCCCceEEeeccCCCCCCcceeEEEEECCE-EEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCC
Q 020245 204 DPAHAQWAQVETSGEKPTARSVFSTVGIGKH-IVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHP 282 (329)
Q Consensus 204 d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~-i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p 282 (329)
+..+.....+... +. ........-++. |++.+.... ...+|.+++.......+.. .
T Consensus 159 ~~~~~~~~~~~~~---~~-~~~~~~~s~dg~~l~~~~~~~~------------~~~i~~~~~~~~~~~~~~~-------~ 215 (297)
T 2ojh_A 159 DIDSGVETRLTHG---EG-RNDGPDYSPDGRWIYFNSSRTG------------QMQIWRVRVDGSSVERITD-------S 215 (297)
T ss_dssp ETTTCCEEECCCS---SS-CEEEEEECTTSSEEEEEECTTS------------SCEEEEEETTSSCEEECCC-------C
T ss_pred ECCCCcceEcccC---CC-ccccceECCCCCEEEEEecCCC------------CccEEEECCCCCCcEEEec-------C
Confidence 7877766655421 11 111111122444 444433211 3478888887776666653 1
Q ss_pred CCCCcceecccccCCcceEEEEcCCCCCCC-----cccceEEEecccCCc
Q 020245 283 GPRGWCAFAGGLRGGKHGLLVYGGNSPSND-----RLDDIYFFTPCLDGI 327 (329)
Q Consensus 283 ~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~-----~~~~v~~~~~~~~~~ 327 (329)
. ... .......+ +..+++++.+.... ....|+++|+++.+.
T Consensus 216 ~-~~~--~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 216 A-YGD--WFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp S-EEE--EEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred C-ccc--CCeEECCC-CCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 1 111 22233223 33555555432211 235688888876543
No 52
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.45 E-value=0.037 Score=46.17 Aligned_cols=191 Identities=10% Similarity=0.020 Sum_probs=96.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--C-CEEEEEccccCCCCCCCceEEEEC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--G-HTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
.+.+|+..... +.+.+||+.+.+........ .. .. .+++ + +.+|+.+... ..++.+|+
T Consensus 9 ~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~~---~~--~~-~~~~s~dg~~l~~~~~~~------~~i~~~d~ 69 (331)
T 3u4y_A 9 SNFGIVVEQHL-------RRISFFSTDTLEILNQITLG---YD--FV-DTAITSDCSNVVVTSDFC------QTLVQIET 69 (331)
T ss_dssp CCEEEEEEGGG-------TEEEEEETTTCCEEEEEECC---CC--EE-EEEECSSSCEEEEEESTT------CEEEEEEC
T ss_pred CCEEEEEecCC-------CeEEEEeCcccceeeeEEcc---CC--cc-eEEEcCCCCEEEEEeCCC------CeEEEEEC
Confidence 46778877532 68999999988875544421 11 12 2333 3 3577765433 48999999
Q ss_pred CCCcE-EEcccCCCCCCCcccceeEeeCC-eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-C
Q 020245 107 RTNQW-TLLSNGDAGPPHRSYHSTAADDR-HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-Q 183 (329)
Q Consensus 107 ~~~~W-~~~~~~~~~p~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~ 183 (329)
.+.+. ......+ ..++.. ....-++ .+| .+... .....+..||+.+.+........ ...+.++.. +
T Consensus 70 ~~~~~~~~~~~~~--~~~~~~-~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~~~~~-----~~~~~~~~spd 138 (331)
T 3u4y_A 70 QLEPPKVVAIQEG--QSSMAD-VDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFISTIPIP-----YDAVGIAISPN 138 (331)
T ss_dssp SSSSCEEEEEEEC--SSCCCC-EEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEEEECC-----TTEEEEEECTT
T ss_pred CCCceeEEecccC--CCCccc-eEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEEEECC-----CCccceEECCC
Confidence 88764 2222221 112211 2222334 555 43322 11137999999988765544332 112344433 4
Q ss_pred C-EEEEEeeeCCCCccc-EEEEeCCCCc-eEEeeccCCCCCCcceeEEEEE-CC-EEEEEcCccCCCCCCcCCCCeeece
Q 020245 184 G-KIWVVYGFAGVEVDD-VHCFDPAHAQ-WAQVETSGEKPTARSVFSTVGI-GK-HIVVYGGEVDPSDLGHLGAGKFAGE 258 (329)
Q Consensus 184 ~-~l~v~gG~~~~~~~~-~~~~d~~~~~-w~~~~~~~~~p~~r~~~~~~~~-~~-~i~i~GG~~~~~~~~~~~~~~~~~~ 258 (329)
+ .+|+.+... .. +..|+..... ....... ..+.......++.. ++ .+|+.+.. ...
T Consensus 139 g~~l~~~~~~~----~~~i~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~--------------~~~ 199 (331)
T 3u4y_A 139 GNGLILIDRSS----ANTVRRFKIDADGVLFDTGQE-FISGGTRPFNITFTPDGNFAFVANLI--------------GNS 199 (331)
T ss_dssp SSCEEEEEETT----TTEEEEEEECTTCCEEEEEEE-EECSSSSEEEEEECTTSSEEEEEETT--------------TTE
T ss_pred CCEEEEEecCC----CceEEEEEECCCCcEeecCCc-cccCCCCccceEECCCCCEEEEEeCC--------------CCe
Confidence 4 477665432 35 6667664322 1111000 11111222233322 34 57776532 246
Q ss_pred eEEEEcCCcee
Q 020245 259 LYSLDTETLVW 269 (329)
Q Consensus 259 ~~~~d~~~~~W 269 (329)
+.+||+++.+.
T Consensus 200 v~v~d~~~~~~ 210 (331)
T 3u4y_A 200 IGILETQNPEN 210 (331)
T ss_dssp EEEEECSSTTS
T ss_pred EEEEECCCCcc
Confidence 88999886654
No 53
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.43 E-value=0.035 Score=45.41 Aligned_cols=223 Identities=7% Similarity=-0.003 Sum_probs=115.5
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++.+|+.... .+.+.+||+. .+...+.... ....-+.++.. ++++|+.... ...+.+||+.
T Consensus 72 ~g~l~v~~~~-------~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~- 133 (300)
T 2qc5_A 72 LGDIWFTENG-------ANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD- 133 (300)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-
T ss_pred CCCEEEEecC-------CCeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCC-
Confidence 4578776431 1568999988 6766554321 11222333333 5678886432 2478899987
Q ss_pred CcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--CCE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--QGK 185 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~ 185 (329)
.+........ ....-..++. -++++|+.... ...+++|++ +.+...+... ........... ++.
T Consensus 134 g~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~----~~~~~~~~i~~d~~g~ 200 (300)
T 2qc5_A 134 GTIYEYDLPN---KGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLP----TNAAAPVGITSGNDGA 200 (300)
T ss_dssp SCEEEEECSS---TTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECS----STTCCEEEEEECTTSS
T ss_pred CCEEEccCCC---CCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCC----CCCCCcceEEECCCCC
Confidence 5555443221 1111222222 35678876421 146889998 6666654322 11222222222 567
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
+|+.... ...+.+||+ +.+........ ......+++.- ++.||+.... .+.+.+||+
T Consensus 201 l~v~~~~----~~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~--------------~~~i~~~~~ 258 (300)
T 2qc5_A 201 LWFVEIM----GNKIGRITT-TGEISEYDIPT---PNARPHAITAGKNSEIWFTEWG--------------ANQIGRITN 258 (300)
T ss_dssp EEEEETT----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECSTTCEEEEETT--------------TTEEEEECT
T ss_pred EEEEccC----CCEEEEEcC-CCcEEEEECCC---CCCCceEEEECCCCCEEEeccC--------------CCeEEEECC
Confidence 8876422 146899998 55665543211 11122233332 4578876531 247889998
Q ss_pred CCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecc
Q 020245 265 ETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPC 323 (329)
Q Consensus 265 ~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~ 323 (329)
+.+...+.. +..... ..++++..+ +.||+... . .|.+|+++
T Consensus 259 -~g~~~~~~~-------~~~~~~-~~~i~~~~~-g~l~v~~~-------~-~i~~~~p~ 299 (300)
T 2qc5_A 259 -DNTIQEYQL-------QTENAE-PHGITFGKD-GSVWFALK-------C-KIGKLNLN 299 (300)
T ss_dssp -TSCEEEEEC-------CSTTCC-CCCEEECTT-SCEEEECS-------S-EEEEEEEC
T ss_pred -CCcEEEEEC-------CccCCc-cceeEeCCC-CCEEEEcc-------C-ceEEeCCC
Confidence 455555543 211111 023333333 55776542 2 67888875
No 54
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.42 E-value=0.036 Score=45.32 Aligned_cols=235 Identities=10% Similarity=0.061 Sum_probs=120.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcc-eeEEEE--CCEEEEEccccCCCCCCCceEEEEC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVG-VTMAAV--GHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
++++|+..... ..+.+||+.......+......+..... ..++.. ++.||+.+... ...+.+||.
T Consensus 40 ~g~l~v~~~~~-------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~~i~~~d~ 107 (286)
T 1q7f_A 40 QNDIIVADTNN-------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-----THQIQIYNQ 107 (286)
T ss_dssp TCCEEEEEGGG-------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-----GCEEEEECT
T ss_pred CCCEEEEECCC-------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-----CCEEEEECC
Confidence 46888875431 5789999885444444332111111112 233332 57899876321 246889996
Q ss_pred CCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCE
Q 020245 107 RTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGK 185 (329)
Q Consensus 107 ~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (329)
.......+... ........++.-++++|+..... ..+.+||+.......+.... ....-..++. .++.
T Consensus 108 ~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~---~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 108 YGQFVRKFGAT---ILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSK---HLEFPNGVVVNDKQE 176 (286)
T ss_dssp TSCEEEEECTT---TCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTT---TCSSEEEEEECSSSE
T ss_pred CCcEEEEecCc---cCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCC---ccCCcEEEEECCCCC
Confidence 55444444321 11111222223367888875422 56889997766554443221 1111122232 2578
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeec-eeEEEE
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAG-ELYSLD 263 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~-~~~~~d 263 (329)
+|+....+ ..+.+||+.......+...+.+ ....+++.- ++.||+.... .+ .|.+||
T Consensus 177 l~v~~~~~----~~i~~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~--------------~~~~i~~~~ 235 (286)
T 1q7f_A 177 IFISDNRA----HCVKVFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNH--------------NNFNLTIFT 235 (286)
T ss_dssp EEEEEGGG----TEEEEEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECS--------------SSCEEEEEC
T ss_pred EEEEECCC----CEEEEEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCC--------------CCEEEEEEC
Confidence 88875432 5899999866544444321111 122233332 5688887642 12 688999
Q ss_pred cCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 264 TETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 264 ~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
.+...-..+.. . .+... - .++++..+ +.+|+.. .+ +.|.+|+...
T Consensus 236 ~~g~~~~~~~~---~--~~~~~-~--~~i~~~~~-g~l~vs~-~~------~~v~v~~~~~ 280 (286)
T 1q7f_A 236 QDGQLISALES---K--VKHAQ-C--FDVALMDD-GSVVLAS-KD------YRLYIYRYVQ 280 (286)
T ss_dssp TTSCEEEEEEE---S--SCCSC-E--EEEEEETT-TEEEEEE-TT------TEEEEEECSC
T ss_pred CCCCEEEEEcc---c--CCCCc-c--eeEEECCC-CcEEEEC-CC------CeEEEEEccc
Confidence 87665555543 0 11111 1 23444333 5588874 22 3566666543
No 55
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.41 E-value=0.043 Score=45.94 Aligned_cols=228 Identities=11% Similarity=0.039 Sum_probs=110.8
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+.+++.|+.+ ..+..+|....+........ .....-.++.+ ++.+++.|+.+ ..+..+|..+
T Consensus 48 ~~~l~tgs~D-------~~v~vW~~~~~~~~~~~~l~---gh~~~v~~~~~~~~~~~l~s~s~D------~~i~lWd~~~ 111 (321)
T 3ow8_A 48 SETVVTGSLD-------DLVKVWKWRDERLDLQWSLE---GHQLGVVSVDISHTLPIAASSSLD------AHIRLWDLEN 111 (321)
T ss_dssp -CEEEEEETT-------SCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTT
T ss_pred CCEEEEEcCC-------CCEEEEECCCCCeeeeeeec---cCCCCEEEEEECCCCCEEEEEeCC------CcEEEEECCC
Confidence 3466666643 45666766555443222211 11111222223 34566666555 4688889887
Q ss_pred CcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIW 187 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~ 187 (329)
.+-...-... +. ........-+++.++.|+.+ ..+..|+..+.+-...... ....-.+++. .+++.+
T Consensus 112 ~~~~~~~~~~--~~-~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~----~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 112 GKQIKSIDAG--PV-DAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDT----RGKFILSIAYSPDGKYL 179 (321)
T ss_dssp TEEEEEEECC--TT-CCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEEC----SSSCEEEEEECTTSSEE
T ss_pred CCEEEEEeCC--Cc-cEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecC----CCceEEEEEECCCCCEE
Confidence 6533222211 11 11122233466777777654 4678888887653322211 1112222232 356677
Q ss_pred EEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEE-EECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 188 VVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 188 v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
+.|+.+ ..+..||..+.+-...-. ....+ -.+++ ..++.+++.|+.+ ..+.++|+.+
T Consensus 180 asg~~d----g~i~iwd~~~~~~~~~~~--~h~~~--v~~l~~spd~~~l~s~s~d--------------g~i~iwd~~~ 237 (321)
T 3ow8_A 180 ASGAID----GIINIFDIATGKLLHTLE--GHAMP--IRSLTFSPDSQLLVTASDD--------------GYIKIYDVQH 237 (321)
T ss_dssp EEEETT----SCEEEEETTTTEEEEEEC--CCSSC--CCEEEECTTSCEEEEECTT--------------SCEEEEETTT
T ss_pred EEEcCC----CeEEEEECCCCcEEEEEc--ccCCc--eeEEEEcCCCCEEEEEcCC--------------CeEEEEECCC
Confidence 777655 478889987765432221 11111 11222 2255777777642 3578888876
Q ss_pred ceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 267 LVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 267 ~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
......-. .....- .+++...+ +..++.|+.+. .|.++|+++
T Consensus 238 ~~~~~~~~-------~h~~~v--~~~~~sp~-~~~l~s~s~D~------~v~iwd~~~ 279 (321)
T 3ow8_A 238 ANLAGTLS-------GHASWV--LNVAFCPD-DTHFVSSSSDK------SVKVWDVGT 279 (321)
T ss_dssp CCEEEEEC-------CCSSCE--EEEEECTT-SSEEEEEETTS------CEEEEETTT
T ss_pred cceeEEEc-------CCCCce--EEEEECCC-CCEEEEEeCCC------cEEEEeCCC
Confidence 64432221 111111 23333333 44777787654 455555544
No 56
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.39 E-value=0.047 Score=45.95 Aligned_cols=240 Identities=11% Similarity=0.133 Sum_probs=124.8
Q ss_pred cceeEEeccCCCCCCCCcceeEEEE-CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECC
Q 020245 5 KGTWIKLDQKGSGPGARSSHAITIV-GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGH 83 (329)
Q Consensus 5 ~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 83 (329)
..+|+.+.. |......++... .+.+|++|-. ..+++-.-...+|+.+...... ......++...++
T Consensus 24 g~~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~~--------g~i~~s~DgG~tW~~~~~~~~~-~~~~~~~i~~~~~ 90 (327)
T 2xbg_A 24 YNPWEAIQL----PTTATILDMSFIDRHHGWLVGVN--------ATLMETRDGGQTWEPRTLVLDH-SDYRFNSVSFQGN 90 (327)
T ss_dssp SCCEEEEEC----SCSSCEEEEEESSSSCEEEEETT--------TEEEEESSTTSSCEECCCCCSC-CCCEEEEEEEETT
T ss_pred CCCceEeec----CCCCcEEEEEECCCCcEEEEcCC--------CeEEEeCCCCCCCeECCCCCCC-CCccEEEEEecCC
Confidence 358998863 333333344333 4578886531 3355554445689987643211 1222334444567
Q ss_pred EEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEE
Q 020245 84 TIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ 163 (329)
Q Consensus 84 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~ 163 (329)
.+|+.|-. ..+++-+-...+|+.+......|.. .....+.-++.+|+.+.. ..+++-+-.-.+|+.
T Consensus 91 ~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~ 156 (327)
T 2xbg_A 91 EGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLPGS-PRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQA 156 (327)
T ss_dssp EEEEEEET-------TEEEEESSTTSSCEECCCCTTCSSC-EEEEEEEETTEEEEEETT------CCEEEESSTTSSEEE
T ss_pred eEEEEECC-------CeEEEECCCCCCceECccccCCCCC-eEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEE
Confidence 88887521 2455433335789998754211211 122222346788877642 235555445668999
Q ss_pred ecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCC-CCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcC
Q 020245 164 YPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPA-HAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGG 240 (329)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~-~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG 240 (329)
+.... ....+.++.. ++.++++|. . ..+++-+-. ..+|+.+.. +.+...+.++.. ++.+|+++.
T Consensus 157 ~~~~~----~~~~~~~~~~~~~~~~~~g~-~----G~~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 157 LVQEA----IGVMRNLNRSPSGEYVAVSS-R----GSFYSTWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp EECSC----CCCEEEEEECTTSCEEEEET-T----SSEEEEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEET
T ss_pred eecCC----CcceEEEEEcCCCcEEEEEC-C----CcEEEEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEeC
Confidence 87542 2223333333 455666552 2 345555433 679998853 223344444433 557887764
Q ss_pred ccCCCCCCcCCCCeeeceeEEEEcC-CceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcC
Q 020245 241 EVDPSDLGHLGAGKFAGELYSLDTE-TLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGG 306 (329)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG 306 (329)
. ..+++.+.. ..+|+.+..+ .++..... ++++..++ +.+|+.|+
T Consensus 224 ~---------------G~~~~s~~D~G~tW~~~~~~----~~~~~~~~--~~v~~~~~-~~~~~~g~ 268 (327)
T 2xbg_A 224 G---------------GKIAFSDPDNSENWGELLSP----LRRNSVGF--LDLAYRTP-NEVWLAGG 268 (327)
T ss_dssp T---------------TEEEEEETTEEEEECCCBCT----TSSCCSCE--EEEEESSS-SCEEEEES
T ss_pred C---------------ceEEEecCCCCCeeEeccCC----cccCCcce--EEEEecCC-CEEEEEeC
Confidence 1 235555333 6789988750 01122222 34444433 55888876
No 57
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.39 E-value=0.019 Score=48.44 Aligned_cols=163 Identities=11% Similarity=0.159 Sum_probs=75.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC-CEEEEEccccCCCCCCCceEEEECC-
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG-HTIYMFGGRDGTHKELNELYSFDTR- 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~- 107 (329)
+++||+.+.... ...++.||+.+.+++.+.... .......+.+..-+ ..||+.+.. ...+..||..
T Consensus 50 dg~l~~~~~~~~-----~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~ 117 (347)
T 3hfq_A 50 KDCLYSVDKEDD-----EGGIAAWQIDGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAA 117 (347)
T ss_dssp TCEEEEEEEETT-----EEEEEEEEEETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECT
T ss_pred CCeEEEEEecCC-----CceEEEEEecCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCC
Confidence 667776653211 257889998877776655411 00111122222223 357766421 2467777774
Q ss_pred CCcEEEcccC---CCCCCCcc----cceeE-eeCCeEEEEcccCCCcCcceeEEEEcC-CCeEEEecCCCCCCCCCCCcE
Q 020245 108 TNQWTLLSNG---DAGPPHRS----YHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVV-DRKWIQYPSAGENCKGRGGPG 178 (329)
Q Consensus 108 ~~~W~~~~~~---~~~p~~r~----~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~ 178 (329)
+.+...+... +..|..|. -+.++ .-++++|+.+... +.+..|++. +.+...+..... +....-..
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~-~~g~~p~~ 191 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTM-EAGFGPRH 191 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTSCEEEEEEEEC-CTTCCEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCCcEEEeeeEEc-CCCCCCce
Confidence 3333333221 21121111 12222 2366766654322 468889887 565554432211 11111112
Q ss_pred EEE-ECCE-EEEEeeeCCCCcccEEEEeC--CCCceEEee
Q 020245 179 LIV-TQGK-IWVVYGFAGVEVDDVHCFDP--AHAQWAQVE 214 (329)
Q Consensus 179 ~~~-~~~~-l~v~gG~~~~~~~~~~~~d~--~~~~w~~~~ 214 (329)
++. -+++ +|+.+... ..+..|+. .+.+++.+.
T Consensus 192 ~~~spdg~~l~v~~~~~----~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELS----SQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp EEECTTSSEEEEEETTT----TEEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCC----CEEEEEEecCCCCceEEee
Confidence 232 3455 67654322 34445544 356665544
No 58
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.35 E-value=0.047 Score=45.56 Aligned_cols=143 Identities=9% Similarity=0.142 Sum_probs=64.5
Q ss_pred CceEEEeCC--CCcEEEEeeCCCCCCCCcceeEEE-EC-CEEEEEccccCCCCCCCceEEEECCCC-cEEEcccCCCCCC
Q 020245 48 NNLHVFDLE--TLTWSVADVTGDVPPPRVGVTMAA-VG-HTIYMFGGRDGTHKELNELYSFDTRTN-QWTLLSNGDAGPP 122 (329)
Q Consensus 48 ~~~~~~d~~--~~~W~~~~~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~p~ 122 (329)
..+..|++. +.+++.+.... .+. .. ..++. -+ ..||+.+.. ...+..||.... ......... .
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~---~ 127 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESA-LPG-SL-THISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVE---G 127 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEE-CSS-CC-SEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEEC---C
T ss_pred CeEEEEEecCCCCceeeccccc-cCC-CC-cEEEEcCCCCEEEEEecC------CCeEEEEECCCCcccccccccc---C
Confidence 457777665 66776554422 111 11 22222 23 346665432 245788887322 222222221 1
Q ss_pred CcccceeEe-eCC-eEEEEcccCCCcCcceeEEEEcCC-CeEEEec--CCCCCCCCCCCcEEEEE-CCE-EEEEeeeCCC
Q 020245 123 HRSYHSTAA-DDR-HVYIFGGCGVSGRLNDLWGFDVVD-RKWIQYP--SAGENCKGRGGPGLIVT-QGK-IWVVYGFAGV 195 (329)
Q Consensus 123 ~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~~~~-~~W~~~~--~~~~~~~~~~~~~~~~~-~~~-l~v~gG~~~~ 195 (329)
...-+.++. -++ .+|+.+..+ ..+..||+.+ .+...+. .... +.......++.. +++ +|+.+..+
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pdg~~l~~~~~~~-- 199 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTT-VEGAGPRHMVFHPNEQYAYCVNELN-- 199 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEEC-STTCCEEEEEECTTSSEEEEEETTT--
T ss_pred CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeeccccccc-CCCCCcceEEECCCCCEEEEEeCCC--
Confidence 111222222 233 566654222 4688999887 6665433 1110 111111223332 444 66655322
Q ss_pred CcccEEEEeCC--CCceEE
Q 020245 196 EVDDVHCFDPA--HAQWAQ 212 (329)
Q Consensus 196 ~~~~~~~~d~~--~~~w~~ 212 (329)
..+..|+.. +.+++.
T Consensus 200 --~~i~~~~~~~~~g~~~~ 216 (343)
T 1ri6_A 200 --SSVDVWELKDPHGNIEC 216 (343)
T ss_dssp --TEEEEEESSCTTSCCEE
T ss_pred --CEEEEEEecCCCCcEEE
Confidence 567788874 444443
No 59
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.31 E-value=0.048 Score=44.31 Aligned_cols=206 Identities=9% Similarity=-0.023 Sum_probs=115.5
Q ss_pred eeEEEEC-CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEE
Q 020245 76 VTMAAVG-HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGF 154 (329)
Q Consensus 76 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 154 (329)
+.++..+ +.||+..|.. ..+.+..+|+.+++-...-+.+ ....+..++..++++|+..-.. +.+.+|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~g~~lyv~t~~~-----~~v~vi 91 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLLNEKLYQVVWLK-----NIGFIY 91 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEETTEEEEEETTC-----SEEEEE
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCCCEEEEEecC---CCcceEEEEEeCCEEEEEEecC-----CEEEEE
Confidence 4555555 7999987632 2468999999998765444332 2334456666788999985432 679999
Q ss_pred EcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCc-ceeEEEEECC
Q 020245 155 DVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTAR-SVFSTVGIGK 233 (329)
Q Consensus 155 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r-~~~~~~~~~~ 233 (329)
|+.+.+-...-+.+ . .....++.-++++|+..| .+.++.+|+++.+-.....-+.-+.+. .-..+...++
T Consensus 92 D~~t~~v~~~i~~g-~---~~g~glt~Dg~~l~vs~g-----s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg 162 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQ-M---KDGWGLATDGKILYGSDG-----TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYING 162 (266)
T ss_dssp ETTTTEEEEEEECC-S---SSCCEEEECSSSEEEECS-----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred ECCCCcEEEEEECC-C---CCeEEEEECCCEEEEECC-----CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECC
Confidence 99987543322221 1 123334444566887654 268999999886643322211111111 1223334477
Q ss_pred EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce---eEeecCCC-C--CCCCCCCCCcceecccccCCcceEEEEcCC
Q 020245 234 HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV---WTRWDDGP-G--SDHHPGPRGWCAFAGGLRGGKHGLLVYGGN 307 (329)
Q Consensus 234 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~-~--~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~ 307 (329)
++|+--.. .+.|.+.|+++.+ |-.++... . ....+..-.. .+++...+.+.+||.|+.
T Consensus 163 ~lyvn~~~--------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~--nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 163 EVWANIWQ--------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVL--NGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp EEEEEETT--------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCE--EEEEEETTTTEEEEEETT
T ss_pred EEEEecCC--------------CCeEEEEECCCCcEEEEEECCCcccccccccccccCce--EEEEEcCCCCEEEEECCC
Confidence 88865432 3689999998764 33332100 0 0000111122 455555443679999986
Q ss_pred CCCCCcccceEEEeccc
Q 020245 308 SPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 308 ~~~~~~~~~v~~~~~~~ 324 (329)
. +.++..++..
T Consensus 227 ~------~~v~~i~l~~ 237 (266)
T 2iwa_A 227 W------PKLFEIKLHL 237 (266)
T ss_dssp C------SEEEEEEEEE
T ss_pred C------CeEEEEEEec
Confidence 5 3566665543
No 60
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.30 E-value=0.05 Score=44.46 Aligned_cols=191 Identities=10% Similarity=0.082 Sum_probs=102.2
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+++||+.... .+.+.+||+. .+...+.... ....-+.++.. ++.+|+.... ...+.+||+.
T Consensus 30 ~g~l~v~~~~-------~~~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~- 91 (300)
T 2qc5_A 30 DGKVWFTQHK-------ANKISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK- 91 (300)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-
T ss_pred CCCEEEEcCC-------CCeEEEECCC-CceEEEECCC---CCCcceeEEECCCCCEEEEecC------CCeEEEECCC-
Confidence 5688886532 2679999998 7776654321 11112233332 4678886422 2468999988
Q ss_pred CcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKI 186 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l 186 (329)
.++....... ....-+.++. -++++|+..... ..+.++|+. .+........ ....-..++. .++++
T Consensus 92 g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 92 GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYDLPN---KGSYPAFITLGSDNAL 159 (300)
T ss_dssp SCEEEEECSS---TTCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSSE
T ss_pred CCeEEecCCC---CCCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEccCCC---CCCCceeEEECCCCCE
Confidence 6666554321 1122223333 367888864321 468889887 6655443211 1112223333 34678
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
|+.... ...+++||+ +.+...+.... ......+++.- ++.||+.... ...+.+||+
T Consensus 160 ~v~~~~----~~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~--------------~~~i~~~~~- 216 (300)
T 2qc5_A 160 WFTENQ----NNSIGRITN-TGKLEEYPLPT---NAAAPVGITSGNDGALWFVEIM--------------GNKIGRITT- 216 (300)
T ss_dssp EEEETT----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSSEEEEETT--------------TTEEEEECT-
T ss_pred EEEecC----CCeEEEECC-CCcEEEeeCCC---CCCCcceEEECCCCCEEEEccC--------------CCEEEEEcC-
Confidence 876421 157899998 66666543211 11122233332 4578876431 236889998
Q ss_pred CceeEeec
Q 020245 266 TLVWTRWD 273 (329)
Q Consensus 266 ~~~W~~~~ 273 (329)
+.....+.
T Consensus 217 ~g~~~~~~ 224 (300)
T 2qc5_A 217 TGEISEYD 224 (300)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEE
Confidence 55555554
No 61
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.30 E-value=0.076 Score=46.30 Aligned_cols=228 Identities=7% Similarity=-0.112 Sum_probs=118.7
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..++.+|.....-+.+.... .........-+++.+++++.. .....++.+|+.+.+...+.... . ....
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~v~~~~~Spdg~~la~~s~~---~~~~~i~~~d~~tg~~~~l~~~~---~-~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QPLMSPAWSPDGSKLAYVTFE---SGRSALVIQTLANGAVRQVASFP---R-HNGA 227 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SCEEEEEECTTSSEEEEEECT---TSSCEEEEEETTTCCEEEEECCS---S-CEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC----CcceeeEEcCCCCEEEEEEec---CCCcEEEEEECCCCcEEEeecCC---C-cccC
Confidence 57899998866555554321 111111112244444554433 12368999999988876655431 1 1111
Q ss_pred eeEeeCCe-EEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeC
Q 020245 128 STAADDRH-VYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDP 205 (329)
Q Consensus 128 ~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~ 205 (329)
....-+++ |++.+..+. ...++.+|+.+.+...+.... ........ -+++.++++... .....++.+|.
T Consensus 228 ~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~~spdg~~l~~~s~~-~g~~~i~~~d~ 298 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGR-----SNNTEPTWFPDSQNLAFTSDQ-AGRPQVYKVNI 298 (415)
T ss_dssp EEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCS-----SCEEEEEECTTSSEEEEEECT-TSSCEEEEEET
T ss_pred EEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCC-----CcccceEECCCCCEEEEEECC-CCCcEEEEEEC
Confidence 22222454 554544322 256999999998876655431 11222222 255544444421 12347999999
Q ss_pred CCCceEEeeccCCCCCCcceeEEE-EECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCC
Q 020245 206 AHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGP 284 (329)
Q Consensus 206 ~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~ 284 (329)
.+.+-+.+... ......++ ..+++.+++++.... ...++.+|+++.....+.. ..
T Consensus 299 ~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g-----------~~~i~~~d~~~~~~~~l~~-------~~- 354 (415)
T 2hqs_A 299 NGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG-----------QQHIAKQDLATGGVQVLSS-------TF- 354 (415)
T ss_dssp TSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS-----------CEEEEEEETTTCCEEECCC-------SS-
T ss_pred CCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcCC-----------ceEEEEEECCCCCEEEecC-------CC-
Confidence 88765554321 11222222 224555555443211 2479999999887766653 11
Q ss_pred CCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCC
Q 020245 285 RGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDG 326 (329)
Q Consensus 285 r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~ 326 (329)
.. .+.+...+ +..+++++.+.. ...||++|+....
T Consensus 355 -~~--~~~~~spd-g~~l~~~s~~~~---~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 355 -LD--ETPSLAPN-GTMVIYSSSQGM---GSVLNLVSTDGRF 389 (415)
T ss_dssp -SC--EEEEECTT-SSEEEEEEEETT---EEEEEEEETTSCC
T ss_pred -Cc--CCeEEcCC-CCEEEEEEcCCC---ccEEEEEECCCCc
Confidence 22 23333333 446777764422 3478888887654
No 62
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=97.29 E-value=0.069 Score=46.99 Aligned_cols=184 Identities=15% Similarity=0.212 Sum_probs=99.6
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++++|+|-| +..|+||..+.+.....-++ +| .. -++....+++|+|-|. ..++||..+.
T Consensus 158 ~~~~yfFkG---------~~yw~yd~~~~~~~~~~w~g-i~--~i-DAA~~~~g~~YfFkG~--------~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG---------NRKWFWDLTTGTKKERSWPA-VG--NC-TSALRWLGRYYCFQGN--------QFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET---------TEEEEEETTTTEEEEECCTT-SC--CC-SEEEEETTEEEEEETT--------EEEEECTTTC
T ss_pred CCeEEEEec---------ccEEEEecccceeecccCCC-CC--cc-chheeeCCceEEEECC--------EEEEEcCccC
Confidence 678899988 67899999876554322122 33 23 3444557899999764 4788887654
Q ss_pred cE------------EEcccCCC---------------CCCC-cccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 110 QW------------TLLSNGDA---------------GPPH-RSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 110 ~W------------~~~~~~~~---------------~p~~-r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
+- ..++..+. .+.+ ...-+++. .++++|+|-| ...|+++.....
T Consensus 217 ~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~ 289 (460)
T 1qhu_A 217 EVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDG 289 (460)
T ss_dssp CCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGC
T ss_pred cccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCC
Confidence 32 11111110 0111 11223333 5789999988 456777654432
Q ss_pred EE--EecCC-CCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEE-------eec-cCCCCCC----cce
Q 020245 161 WI--QYPSA-GENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ-------VET-SGEKPTA----RSV 225 (329)
Q Consensus 161 W~--~~~~~-~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~-------~~~-~~~~p~~----r~~ 225 (329)
+. .+... +..|. .--++...++++|++-| +.+|+|+.... .+. +.. . .+|.. +-.
T Consensus 290 ~~p~~Is~~WpglP~--~IDAAf~~~~~~yfFkG------~~yw~f~~~~g-~~~~~GyPK~I~~~l-Glp~~~~~~~ID 359 (460)
T 1qhu_A 290 WHSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQD------TKVYVFLTKGG-YTLVNGYPKRLEKEL-GSPPVISLEAVD 359 (460)
T ss_dssp CCCEEGGGTCTTSCS--SCSEEEEETTEEEEEET------TEEEEEECSBS-CEECTTCCEEHHHHH-CCCSSCCCSCCC
T ss_pred cCccchhhhccCCCC--CCcEEEEECCeEEEEeC------CEEEEEeCCCC-ceecCCCCeEHHHhc-cCCCccccCccc
Confidence 21 12111 11122 23334445789999977 68999986431 222 211 1 22222 122
Q ss_pred eEEEE-ECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 226 FSTVG-IGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 226 ~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
.+... -++++|++-| +..|+||....
T Consensus 360 AA~~~~~~~ktyfFkG----------------~~ywryd~~~~ 386 (460)
T 1qhu_A 360 AAFVCPGSSRLHIMAG----------------RRLWWLDLKSG 386 (460)
T ss_dssp EEECCTTCCEEEEEET----------------TEEEEEEGGGG
T ss_pred EEEEeCCCCEEEEEEC----------------CEEEEEECCCC
Confidence 22211 2568999987 47899998743
No 63
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.29 E-value=0.057 Score=44.69 Aligned_cols=190 Identities=11% Similarity=0.085 Sum_probs=94.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||..+.+-...-. .....-.++.+ ++.+++.|+.+ ..+..||..
T Consensus 76 ~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~ 137 (312)
T 4ery_A 76 DSNLLVSASDD-------KTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVK 137 (312)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTCCEEEEEE-----CCSSCEEEEEECSSSSEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEECCC-------CEEEEEECCCCcEEEEEc-----CCCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECC
Confidence 34555555532 568888887665322211 11111122222 34566666655 468889988
Q ss_pred CCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKI 186 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l 186 (329)
+.+-...-... ...-.......++++++.|+.+ ..+..||+.+.+........ .......+.. .+++.
T Consensus 138 ~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 206 (312)
T 4ery_A 138 TGKCLKTLPAH---SDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDD---DNPPVSFVKFSPNGKY 206 (312)
T ss_dssp TCCEEEEECCC---SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCS---SCCCEEEEEECTTSSE
T ss_pred CCEEEEEecCC---CCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeeEEecc---CCCceEEEEECCCCCE
Confidence 76533221110 1111111122356777777754 46888999887643322211 1111122222 34566
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcc-eeEEE-EECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARS-VFSTV-GIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~-~~~~~-~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
++.++.+ ..+..||..+.+-...-.. ...... ..... ..++.+++.|+.+ ..+..+|+
T Consensus 207 l~~~~~d----~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~sg~~d--------------g~i~vwd~ 266 (312)
T 4ery_A 207 ILAATLD----NTLKLWDYSKGKCLKTYTG--HKNEKYCIFANFSVTGGKWIVSGSED--------------NLVYIWNL 266 (312)
T ss_dssp EEEEETT----TEEEEEETTTTEEEEEECS--SCCSSSCCCEEEECSSSCEEEECCTT--------------SCEEEEET
T ss_pred EEEEcCC----CeEEEEECCCCcEEEEEEe--cCCceEEEEEEEEeCCCcEEEEECCC--------------CEEEEEEC
Confidence 6666644 5788899877654332211 111111 11122 2355677777742 36888998
Q ss_pred CCce
Q 020245 265 ETLV 268 (329)
Q Consensus 265 ~~~~ 268 (329)
.+..
T Consensus 267 ~~~~ 270 (312)
T 4ery_A 267 QTKE 270 (312)
T ss_dssp TTCC
T ss_pred CCch
Confidence 7664
No 64
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.26 E-value=0.057 Score=44.10 Aligned_cols=191 Identities=9% Similarity=0.067 Sum_probs=102.6
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++.+|+.... .+.+.+||+. .+........ ....-+.++. -++.+|+.... ...+++||+.
T Consensus 25 ~g~l~v~~~~-------~~~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~- 86 (299)
T 2z2n_A 25 KGKVWITQHK-------ANMISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA------ANKIGRITKK- 86 (299)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-
T ss_pred CCCEEEEecC-------CCcEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC------CCeEEEECCC-
Confidence 5688886431 1579999998 7776655321 1111223333 24678886432 2468899886
Q ss_pred CcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKI 186 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l 186 (329)
.+.+.+.... ....-..++.. ++++|+.... ...+.++|+ +.+...+.... .......++.. ++.+
T Consensus 87 g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l 154 (299)
T 2z2n_A 87 GIIKEYTLPN---PDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNAL 154 (299)
T ss_dssp SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCE
T ss_pred CcEEEEeCCC---cCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCE
Confidence 4555544221 11122233333 5788886432 146888988 66655543221 11222333333 5678
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
|+.... ...++++|+ +.+........ ......+++.. ++.||+.... ...+.+||+
T Consensus 155 ~v~~~~----~~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~--------------~~~i~~~~~- 211 (299)
T 2z2n_A 155 WFTENQ----NNAIGRITE-SGDITEFKIPT---PASGPVGITKGNDDALWFVEII--------------GNKIGRITT- 211 (299)
T ss_dssp EEEETT----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSSEEEEETT--------------TTEEEEECT-
T ss_pred EEEeCC----CCEEEEEcC-CCcEEEeeCCC---CCCcceeEEECCCCCEEEEccC--------------CceEEEECC-
Confidence 876421 257899998 67776543211 11122233333 4578876532 246889999
Q ss_pred CceeEeec
Q 020245 266 TLVWTRWD 273 (329)
Q Consensus 266 ~~~W~~~~ 273 (329)
+.....+.
T Consensus 212 ~g~~~~~~ 219 (299)
T 2z2n_A 212 SGEITEFK 219 (299)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEE
Confidence 66666654
No 65
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.24 E-value=0.029 Score=53.43 Aligned_cols=177 Identities=12% Similarity=0.177 Sum_probs=97.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCC---CCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTG---DVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~---~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
++.|++... +.+++||+.+.+|+...... .++.... .++.. -++.|++... ..+++||
T Consensus 462 ~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~~g~lWigt~--------~Gl~~~~ 523 (795)
T 4a2l_A 462 EGNLWLGTL---------SALVRFNPEQRSFTTIEKEKDGTPVVSKQI-TTLFRDSHKRLWIGGE--------EGLSVFK 523 (795)
T ss_dssp SSCEEEEES---------SCEEEEETTTTEEEECCBCTTCCBCCCCCE-EEEEECTTCCEEEEES--------SCEEEEE
T ss_pred CCCEEEEec---------CceeEEeCCCCeEEEccccccccccCCceE-EEEEECCCCCEEEEeC--------CceEEEe
Confidence 456776432 35899999999988765431 1111111 12222 2457877532 3699999
Q ss_pred CCCCcEEEcccCCCCC-CC-cccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE
Q 020245 106 TRTNQWTLLSNGDAGP-PH-RSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT 182 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p-~~-r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 182 (329)
+.+.++ ......... .+ ..-.+++. .++.|++... .-+++||+.+++++........+... ..+++.-
T Consensus 524 ~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d 594 (795)
T 4a2l_A 524 QEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILED 594 (795)
T ss_dssp EETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEEC
T ss_pred CCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEEC
Confidence 988887 443210001 11 11112222 3567777432 24899999999998876542222221 1222222
Q ss_pred -CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcce-eEEEEE-CCEEEEEcC
Q 020245 183 -QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSV-FSTVGI-GKHIVVYGG 240 (329)
Q Consensus 183 -~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~-~~~~~~-~~~i~i~GG 240 (329)
++.|++.+. .-+.+||+++.+++.......++..... .+++.. ++.||+ |+
T Consensus 595 ~~g~lWi~t~------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~ 648 (795)
T 4a2l_A 595 SFGRLWLSTN------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYF-GG 648 (795)
T ss_dssp TTSCEEEEET------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEE-EE
T ss_pred CCCCEEEEcC------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEE-ec
Confidence 467877653 5789999999999887655455544443 233333 446655 54
No 66
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=97.22 E-value=0.071 Score=46.94 Aligned_cols=189 Identities=17% Similarity=0.249 Sum_probs=101.6
Q ss_pred eEEEE-CCEEEEEcCccCCCCccCCceEEEeCCCCc--E-EEEeeC-CCCCCCCcceeEEE-----ECCEEEEEccccCC
Q 020245 25 AITIV-GQKVYAFGGEFTPRVPVDNNLHVFDLETLT--W-SVADVT-GDVPPPRVGVTMAA-----VGHTIYMFGGRDGT 94 (329)
Q Consensus 25 ~~~~~-~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W-~~~~~~-~~~p~~r~~~~~~~-----~~~~iyv~GG~~~~ 94 (329)
++... ++++|+|-| +.+|+|+-.... . +.+... ..+|. ...++... .++++|+|-|
T Consensus 101 Aa~~~~~g~~yfFkG---------~~yW~~~~~~~~~GYPk~I~~~fpGlp~-~IDAA~~~~~~~~~~~~~yfFkG---- 166 (460)
T 1qhu_A 101 AAFRHGHTSVYLIKG---------DKVWVYTSEKNEKVYPKSLQDEFPGIPF-PLDAAVECHRGECQDEGILFFQG---- 166 (460)
T ss_dssp EEEEETTTEEEEEET---------TEEEEECC-------CEEHHHHSTTCCS-SCCEEEEECBBTBSSSEEEEEET----
T ss_pred eEEEeCCCcEEEEec---------cEEEEEeCCcccCCCCeEhhhccCCCCC-CeeEEEECCccCCCCCeEEEEec----
Confidence 33334 589999987 668888643211 0 122111 11332 33333322 2678888865
Q ss_pred CCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE------------E
Q 020245 95 HKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW------------I 162 (329)
Q Consensus 95 ~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W------------~ 162 (329)
+..|+||..+++.... ..+..| . --++....+++|+|-| +..++||..+.+- .
T Consensus 167 ----~~yw~yd~~~~~~~~~-~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~gyPk~is~~w~ 231 (460)
T 1qhu_A 167 ----NRKWFWDLTTGTKKER-SWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPPGYPLDVRDYFL 231 (460)
T ss_dssp ----TEEEEEETTTTEEEEE-CCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCTTCCEEHHHHTS
T ss_pred ----ccEEEEecccceeecc-cCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccCCCCcchhhccc
Confidence 3589999988876532 222222 2 2344456799999988 5678888765431 1
Q ss_pred EecCC---------------CCCCCCC-CCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccC---CCCCC
Q 020245 163 QYPSA---------------GENCKGR-GGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSG---EKPTA 222 (329)
Q Consensus 163 ~~~~~---------------~~~~~~~-~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~---~~p~~ 222 (329)
.++.. +..+.+. ..-++.. .++++|++-| ...|+++.....+....... .+|.
T Consensus 232 ~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg------~~yWR~~~~~~~~~p~~Is~~WpglP~- 304 (460)
T 1qhu_A 232 SCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG------SHYWRLDTNRDGWHSWPIAHQWPQGPS- 304 (460)
T ss_dssp CCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET------TEEEECTTGGGCCCCEEGGGTCTTSCS-
T ss_pred CCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC------CEEEEEecCCCCcCccchhhhccCCCC-
Confidence 11110 0001111 2223333 4688999877 57888886543332111111 2332
Q ss_pred cceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 223 RSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 223 r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
.--++...++++|++=| +.+|+|+...
T Consensus 305 -~IDAAf~~~~~~yfFkG----------------~~yw~f~~~~ 331 (460)
T 1qhu_A 305 -TVDAAFSWEDKLYLIQD----------------TKVYVFLTKG 331 (460)
T ss_dssp -SCSEEEEETTEEEEEET----------------TEEEEEECSB
T ss_pred -CCcEEEEECCeEEEEeC----------------CEEEEEeCCC
Confidence 23344456789999976 3688888653
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.21 E-value=0.078 Score=44.79 Aligned_cols=196 Identities=11% Similarity=0.019 Sum_probs=94.2
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||..+.++....... .....-..+.+ ++++++.|+.+ ..+..||..
T Consensus 63 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~ 126 (372)
T 1k8k_C 63 DSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVIL---RINRAARCVRWAPNEKKFAVGSGS------RVISICYFE 126 (372)
T ss_dssp TTTEEEEEETT-------SCEEEEEEETTEEEEEEECC---CCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEE
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCeeeeeEEee---cCCCceeEEEECCCCCEEEEEeCC------CEEEEEEec
Confidence 45566666532 56888998887766544321 11112222333 45566666544 356666665
Q ss_pred CCc-EEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcC------------------CCeEEEecCC
Q 020245 108 TNQ-WTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVV------------------DRKWIQYPSA 167 (329)
Q Consensus 108 ~~~-W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~------------------~~~W~~~~~~ 167 (329)
+.. |........ +....-.++.. -++++++.|+.+ ..+..||.. +.+- +...
T Consensus 127 ~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 198 (372)
T 1k8k_C 127 QENDWWVCKHIKK-PIRSTVLSLDWHPNSVLLAAGSCD-----FKCRIFSAYIKEVEERPAPTPWGSKMPFGEL--MFES 198 (372)
T ss_dssp TTTTEEEEEEECT-TCCSCEEEEEECTTSSEEEEEETT-----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCE--EEEC
T ss_pred CCCcceeeeeeec-ccCCCeeEEEEcCCCCEEEEEcCC-----CCEEEEEcccccccccccccccccccchhhh--eEec
Confidence 543 322222210 11111122222 256777777754 357788853 2221 1111
Q ss_pred CCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEE-EECCEEEEEcCccCCC
Q 020245 168 GENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYGGEVDPS 245 (329)
Q Consensus 168 ~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~GG~~~~~ 245 (329)
. .....-.+++. .++..++.++.+ ..+..||..+.+-...-.. . .. ...++. .-++.+++.| .+
T Consensus 199 ~--~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~--~-~~-~v~~~~~~~~~~~l~~~-~d--- 264 (372)
T 1k8k_C 199 S--SSCGWVHGVCFSANGSRVAWVSHD----STVCLADADKKMAVATLAS--E-TL-PLLAVTFITESSLVAAG-HD--- 264 (372)
T ss_dssp C--CCSSCEEEEEECSSSSEEEEEETT----TEEEEEEGGGTTEEEEEEC--S-SC-CEEEEEEEETTEEEEEE-TT---
T ss_pred C--CCCCeEEEEEECCCCCEEEEEeCC----CEEEEEECCCCceeEEEcc--C-CC-CeEEEEEecCCCEEEEE-eC---
Confidence 1 01111222222 245566666644 4788889876654332211 1 11 112222 3366766655 31
Q ss_pred CCCcCCCCeeeceeEEEEcCC--ceeEeecC
Q 020245 246 DLGHLGAGKFAGELYSLDTET--LVWTRWDD 274 (329)
Q Consensus 246 ~~~~~~~~~~~~~~~~~d~~~--~~W~~~~~ 274 (329)
..+..||+.. ..|..+..
T Consensus 265 -----------~~i~i~~~~~~~~~~~~~~~ 284 (372)
T 1k8k_C 265 -----------CFPVLFTYDSAAGKLSFGGR 284 (372)
T ss_dssp -----------SSCEEEEEETTTTEEEECCC
T ss_pred -----------CeEEEEEccCcCceEEEeec
Confidence 3566777777 88877644
No 68
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.19 E-value=0.074 Score=45.86 Aligned_cols=155 Identities=12% Similarity=0.094 Sum_probs=78.4
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEE-----EcccCCCCCCCcccceeEee-CC-eEEEEcccCCCcCcceeEEE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWT-----LLSNGDAGPPHRSYHSTAAD-DR-HVYIFGGCGVSGRLNDLWGF 154 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-----~~~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~ 154 (329)
++.+++.|+.+ ..+..||..+.... .+.... .....-.++... ++ .+++.|+.+ ..+..|
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iw 159 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVW 159 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTEEEEEETT-----SCEEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEE
Confidence 45677777654 46888888776321 111110 011111122222 33 577777754 468999
Q ss_pred EcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECC
Q 020245 155 DVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGK 233 (329)
Q Consensus 155 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~ 233 (329)
|+.+.+....-... .....-.++... ++.+++.++.+ ..+..||+.+.+-...... .....+....+..-++
T Consensus 160 d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 160 DVGTGAAVLTLGPD--VHPDTIYSVDWSRDGALICTSCRD----KRVRVIEPRKGTVVAEKDR-PHEGTRPVHAVFVSEG 232 (402)
T ss_dssp ETTTTEEEEEECTT--TCCSCEEEEEECTTSSCEEEEETT----SEEEEEETTTTEEEEEEEC-SSCSSSCCEEEECSTT
T ss_pred ECCCCCccEEEecC--CCCCceEEEEECCCCCEEEEEecC----CcEEEEeCCCCceeeeecc-CCCCCcceEEEEcCCC
Confidence 99988755443201 122222233333 56677777654 5788999877654333211 1111112222223366
Q ss_pred EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 234 HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 234 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
.+++.|..... ...+.+||+.+.
T Consensus 233 ~~l~~g~~~~~-----------d~~i~iwd~~~~ 255 (402)
T 2aq5_A 233 KILTTGFSRMS-----------ERQVALWDTKHL 255 (402)
T ss_dssp EEEEEEECTTC-----------CEEEEEEETTBC
T ss_pred cEEEEeccCCC-----------CceEEEEcCccc
Confidence 77777621000 247889998764
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.18 E-value=0.1 Score=45.61 Aligned_cols=212 Identities=14% Similarity=0.078 Sum_probs=108.5
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..+..||..+.+-...-. .....-.++..++..++.|+.+ ..+..||..+.+-...-.. .....
T Consensus 179 g~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~-----~~~~v 242 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLY-----GHTSTVRCMHLHEKRVVSGSRD------ATLRVWDIETGQCLHVLMG-----HVAAV 242 (445)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEEETTEEEEEETT------SEEEEEESSSCCEEEEEEC-----CSSCE
T ss_pred CeEEEEECCcCcEEEEEC-----CCCCcEEEEEecCCEEEEEeCC------CEEEEEECCCCcEEEEEcC-----CcccE
Confidence 567778877664322111 1111222333344455555544 4688888887653322111 11122
Q ss_pred eeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCC
Q 020245 128 STAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 128 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
.++..++..++.|+.+ ..+..||+.+.+-...-.. .. ....++..++..++.|+.+ ..+..||..+
T Consensus 243 ~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~----~~-~~v~~~~~~~~~l~~~~~d----~~i~i~d~~~ 308 (445)
T 2ovr_B 243 RCVQYDGRRVVSGAYD-----FMVKVWDPETETCLHTLQG----HT-NRVYSLQFDGIHVVSGSLD----TSIRVWDVET 308 (445)
T ss_dssp EEEEECSSCEEEEETT-----SCEEEEEGGGTEEEEEECC----CS-SCEEEEEECSSEEEEEETT----SCEEEEETTT
T ss_pred EEEEECCCEEEEEcCC-----CEEEEEECCCCcEeEEecC----CC-CceEEEEECCCEEEEEeCC----CeEEEEECCC
Confidence 2333467777777754 4688899887754332221 11 1223334477777777755 5788899877
Q ss_pred CceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCcee-EeecCCCCCCCCCC-CC
Q 020245 208 AQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVW-TRWDDGPGSDHHPG-PR 285 (329)
Q Consensus 208 ~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~p~-~r 285 (329)
.+-...-. .......++..++.+++.|+.+ ..+..||+.+..- ..+.. +. ..
T Consensus 309 ~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d--------------g~i~vwd~~~~~~~~~~~~-------~~~~~ 362 (445)
T 2ovr_B 309 GNCIHTLT-----GHQSLTSGMELKDNILVSGNAD--------------STVKIWDIKTGQCLQTLQG-------PNKHQ 362 (445)
T ss_dssp CCEEEEEC-----CCCSCEEEEEEETTEEEEEETT--------------SCEEEEETTTCCEEEEECS-------TTSCS
T ss_pred CCEEEEEc-----CCcccEEEEEEeCCEEEEEeCC--------------CeEEEEECCCCcEEEEEcc-------CCCCC
Confidence 65433221 1111222334455566666642 4688899876543 22221 11 11
Q ss_pred CcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 286 GWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 286 ~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
.. ..++..+++ +++.|+.+. .|.+||+++.
T Consensus 363 ~~--v~~~~~~~~--~l~s~~~dg------~v~iwd~~~~ 392 (445)
T 2ovr_B 363 SA--VTCLQFNKN--FVITSSDDG------TVKLWDLKTG 392 (445)
T ss_dssp SC--EEEEEECSS--EEEEEETTS------EEEEEETTTC
T ss_pred CC--EEEEEECCC--EEEEEeCCC------eEEEEECCCC
Confidence 11 333444543 788887653 5666666554
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.1 Score=44.92 Aligned_cols=228 Identities=7% Similarity=-0.027 Sum_probs=108.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||........+... . ..-..+.+ +++.++.++.+ ..+..||..
T Consensus 119 ~~~~l~~~~~d-------g~i~i~~~~~~~~~~~~~~-----~-~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~ 179 (425)
T 1r5m_A 119 DGNSIVTGVEN-------GELRLWNKTGALLNVLNFH-----R-APIVSVKWNKDGTHIISMDVE------NVTILWNVI 179 (425)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCC-----C-SCEEEEEECTTSSEEEEEETT------CCEEEEETT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeeccCC-----C-ccEEEEEECCCCCEEEEEecC------CeEEEEECC
Confidence 45666666642 5688888544333333321 1 11222222 34555555543 468888988
Q ss_pred CCcEEEcccCCCCC-----------CCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 108 TNQWTLLSNGDAGP-----------PHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 108 ~~~W~~~~~~~~~p-----------~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
+.+....-.....+ ....-..+....+..+++|+.+ ..+..||+.+.+-...... ....-
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~----~~~~i 250 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIG----HHGPI 250 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECC----CSSCE
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeecc----CCCce
Confidence 76543322221100 0000222233334445666643 4688999887642222111 11122
Q ss_pred cEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCe
Q 020245 177 PGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGK 254 (329)
Q Consensus 177 ~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~ 254 (329)
.+++.. ++.+++.++.+ ..+..||..+.+...... . ......++... ++ +++.++.
T Consensus 251 ~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~--~--~~~~i~~~~~~~~~-~l~~~~~------------- 308 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSASDD----GTLRIWHGGNGNSQNCFY--G--HSQSIVSASWVGDD-KVISCSM------------- 308 (425)
T ss_dssp EEEEEETTTTEEEEEETT----SCEEEECSSSBSCSEEEC--C--CSSCEEEEEEETTT-EEEEEET-------------
T ss_pred EEEEECCCCCEEEEEcCC----CEEEEEECCCCccceEec--C--CCccEEEEEECCCC-EEEEEeC-------------
Confidence 233333 56667777644 468888876654322221 1 11122233333 44 5555653
Q ss_pred eeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 255 FAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 255 ~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
-..+.+||+.+..-...-. ...... .+++...+ +.+++.|+.+. .|.+||+++
T Consensus 309 -d~~i~i~d~~~~~~~~~~~-------~~~~~i--~~~~~s~~-~~~l~~~~~dg------~i~i~~~~~ 361 (425)
T 1r5m_A 309 -DGSVRLWSLKQNTLLALSI-------VDGVPI--FAGRISQD-GQKYAVAFMDG------QVNVYDLKK 361 (425)
T ss_dssp -TSEEEEEETTTTEEEEEEE-------CTTCCE--EEEEECTT-SSEEEEEETTS------CEEEEECHH
T ss_pred -CCcEEEEECCCCcEeEecc-------cCCccE--EEEEEcCC-CCEEEEEECCC------eEEEEECCC
Confidence 2468899987765333222 111111 23333333 44778887543 567777654
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.14 E-value=0.16 Score=48.15 Aligned_cols=229 Identities=8% Similarity=-0.039 Sum_probs=112.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++.++++|+.+ ..+..||..+.+....... . ..........-+++.++.|+.+ ..+..||..+.
T Consensus 24 ~~~~la~~~~~-------g~v~iwd~~~~~~~~~~~~--~-~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~ 87 (814)
T 3mkq_A 24 TEPWVLTTLYS-------GRVEIWNYETQVEVRSIQV--T-ETPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTG 87 (814)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEEC--C-SSCEEEEEEEGGGTEEEEEETT------SEEEEEETTTC
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCceEEEEec--C-CCcEEEEEEeCCCCEEEEEeCC------CeEEEEECCCC
Confidence 45666666532 5788999887654332221 1 1111111222244566666544 47889998877
Q ss_pred cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC-eEEEecCCCCCCCCCCCcEEEEE--CCEE
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR-KWIQYPSAGENCKGRGGPGLIVT--QGKI 186 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~-~W~~~~~~~~~~~~~~~~~~~~~--~~~l 186 (329)
+....-.. ....-......-++..++.|+.+ ..+..||..++ ........ ....-.+++.. ++..
T Consensus 88 ~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 88 EKVVDFEA---HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQTFEG----HEHFVMCVAFNPKDPST 155 (814)
T ss_dssp CEEEEEEC---CSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEEEEC----CSSCEEEEEEETTEEEE
T ss_pred cEEEEEec---CCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEEEcC----CCCcEEEEEEEcCCCCE
Confidence 65432221 01111112222355566666643 46888998876 33332221 12222333333 3557
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEE-E--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVG-I--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~-~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
++.++.+ ..+..||..+.+-...... . .......+.. . ++.+++.|+.+ ..+..||
T Consensus 156 l~~~~~d----g~v~vwd~~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~~~l~~~~~d--------------g~i~~~d 214 (814)
T 3mkq_A 156 FASGCLD----RTVKVWSLGQSTPNFTLTT-G--QERGVNYVDYYPLPDKPYMITASDD--------------LTIKIWD 214 (814)
T ss_dssp EEEEETT----SEEEEEETTCSSCSEEEEC-C--CTTCCCEEEECCSTTCCEEEEECTT--------------SEEEEEE
T ss_pred EEEEeCC----CeEEEEECCCCcceeEEec-C--CCCCEEEEEEEECCCCCEEEEEeCC--------------CEEEEEE
Confidence 7777654 4788888765433222211 1 1111122222 2 55677777642 3688889
Q ss_pred cCCceeEe-ecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 264 TETLVWTR-WDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 264 ~~~~~W~~-~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
..+..-.. +.. .. ... .+++...+ +.+++.|+.+. .|.+||+.+
T Consensus 215 ~~~~~~~~~~~~-------~~-~~v--~~~~~~~~-~~~l~~~~~dg------~v~vwd~~~ 259 (814)
T 3mkq_A 215 YQTKSCVATLEG-------HM-SNV--SFAVFHPT-LPIIISGSEDG------TLKIWNSST 259 (814)
T ss_dssp TTTTEEEEEEEC-------CS-SCE--EEEEECSS-SSEEEEEETTS------CEEEEETTT
T ss_pred CCCCcEEEEEcC-------CC-CCE--EEEEEcCC-CCEEEEEeCCC------eEEEEECCC
Confidence 87664322 221 11 111 23333333 44777777653 456666554
No 72
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.10 E-value=0.074 Score=46.35 Aligned_cols=189 Identities=13% Similarity=0.075 Sum_probs=101.3
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CC-EEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GH-TIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHR 124 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r 124 (329)
..++.+|+.+.+...+.... . ......+ ++ .|++.+... ....++.+|+.+.+...+.... ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~---~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~l~~~~----~~ 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---R---HNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQVTDGR----SN 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---S---CEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEECCCCS----SC
T ss_pred cEEEEEECCCCcEEEeecCC---C---cccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEeCcCCC----Cc
Confidence 57999999988776554321 1 1222233 33 455454322 2457999999988776654331 11
Q ss_pred ccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEE
Q 020245 125 SYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCF 203 (329)
Q Consensus 125 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~ 203 (329)
.......-+++.++++.... ....++.+|+.+.+-..+... .......+. -+++.+++++..+ ....++.+
T Consensus 269 ~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~ 340 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQ 340 (415)
T ss_dssp EEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECS-SCEEEEEE
T ss_pred ccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcC-CceEEEEE
Confidence 11112222555445444221 124789999988775544322 111222222 3555555544321 12578999
Q ss_pred eCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecC
Q 020245 204 DPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 204 d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
|+.+.+...+... ......+..-+++.+++++.... ...++.+|++....+.+..
T Consensus 341 d~~~~~~~~l~~~-----~~~~~~~~spdg~~l~~~s~~~~-----------~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 341 DLATGGVQVLSST-----FLDETPSLAPNGTMVIYSSSQGM-----------GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp ETTTCCEEECCCS-----SSCEEEEECTTSSEEEEEEEETT-----------EEEEEEEETTSCCEEECCC
T ss_pred ECCCCCEEEecCC-----CCcCCeEEcCCCCEEEEEEcCCC-----------ccEEEEEECCCCcEEEeeC
Confidence 9988887665421 11111222235666666654321 2479999998887777654
No 73
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.055 Score=51.24 Aligned_cols=107 Identities=12% Similarity=0.095 Sum_probs=62.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--C--CEEEEEccccCCCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--G--HTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
++.+++.|+.+ ..+..||....++..+.... .....-.++.+ + +.+++.|+.+ ..+..||
T Consensus 20 dg~~latg~~d-------g~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd 83 (753)
T 3jro_A 20 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWK 83 (753)
T ss_dssp SSCCEEEEETT-------TEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEE
T ss_pred CCCeEEEEECC-------CcEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEE
Confidence 45666666642 56888888776776665532 22222233333 2 5666777655 4688899
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEee-C--CeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAAD-D--RHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
..+.+|..+..... ....-.++... + +.+++.|+.+ ..+..||..+.
T Consensus 84 ~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 84 EENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp EETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred CCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 98888766655421 11111222222 3 6777887754 46788888765
No 74
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.14 Score=44.88 Aligned_cols=150 Identities=11% Similarity=0.021 Sum_probs=73.6
Q ss_pred EEEEEcCccCCCCccCCceEEEeCC--CCcEE-EEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEEC
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLE--TLTWS-VADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~--~~~W~-~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
.|++.|+.+ ..+..||.. +.+.. .+.... .+. .-..+.+ +++.++.|+.. ..++.+|.
T Consensus 116 ~l~~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~---~~~-~v~~~~~sp~~~~l~~~~~~------g~v~~~~~ 178 (450)
T 2vdu_B 116 RLIACADSD-------KSLLVFDVDKTSKNVLKLRKRFC---FSK-RPNAISIAEDDTTVIIADKF------GDVYSIDI 178 (450)
T ss_dssp EEEEEEGGG-------TEEEEEEECSSSSSCEEEEEEEE---CSS-CEEEEEECTTSSEEEEEETT------SEEEEEET
T ss_pred EEEEEECCC-------CeEEEEECcCCCCceeeeeeccc---CCC-CceEEEEcCCCCEEEEEeCC------CcEEEEec
Confidence 455777643 568888877 44433 222111 111 1122222 44555665433 46788887
Q ss_pred CCCcEEE--cccCCCCCCCcccceeEeeC---CeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE
Q 020245 107 RTNQWTL--LSNGDAGPPHRSYHSTAADD---RHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV 181 (329)
Q Consensus 107 ~~~~W~~--~~~~~~~p~~r~~~~~~~~~---~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 181 (329)
.+..... ..... .....-......-+ +++++.|+.+ ..+..||+.+.+........ ....-.+++.
T Consensus 179 ~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~---h~~~v~~~~~ 249 (450)
T 2vdu_B 179 NSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFG---HKHFVSSICC 249 (450)
T ss_dssp TSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCC---CSSCEEEEEE
T ss_pred CCcccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecC---CCCceEEEEE
Confidence 6543221 00110 00111111122235 6777887764 46888998876543321111 1111122222
Q ss_pred ECCEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 182 TQGKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 182 ~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
.++++++.|+.+ ..+..||..+.+..
T Consensus 250 sd~~~l~s~~~d----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 250 GKDYLLLSAGGD----DKIFAWDWKTGKNL 275 (450)
T ss_dssp CSTTEEEEEESS----SEEEEEETTTCCEE
T ss_pred CCCCEEEEEeCC----CeEEEEECCCCcEe
Confidence 267777777754 57888898776643
No 75
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.12 Score=43.52 Aligned_cols=196 Identities=9% Similarity=-0.038 Sum_probs=94.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+.+||..+.+-...-. .....-..+.+ +++.++.|+.+ ..+..||..
T Consensus 43 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~ 104 (369)
T 3zwl_B 43 EGDLLFSCSKD-------SSASVWYSLNGERLGTLD-----GHTGTIWSIDVDCFTKYCVTGSAD------YSIKLWDVS 104 (369)
T ss_dssp TSCEEEEEESS-------SCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------TEEEEEETT
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCchhhhhhh-----hcCCcEEEEEEcCCCCEEEEEeCC------CeEEEEECC
Confidence 55666666532 568899988765432221 11111222233 35566666544 468899988
Q ss_pred CCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe----EEEecCCCCC----CCCC-CCcE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK----WIQYPSAGEN----CKGR-GGPG 178 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~----W~~~~~~~~~----~~~~-~~~~ 178 (329)
+.+-...-.. +.+ .......-+++.++.++.+.......+..||+.+.. +......... .... ...+
T Consensus 105 ~~~~~~~~~~---~~~-v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 105 NGQCVATWKS---PVP-VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp TCCEEEEEEC---SSC-EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred CCcEEEEeec---CCC-eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 7764433322 111 122222235666666665422333567777765442 2222111000 0010 1122
Q ss_pred EEE-ECCEEEEEeeeCCCCcccEEEEeCCC-CceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCee
Q 020245 179 LIV-TQGKIWVVYGFAGVEVDDVHCFDPAH-AQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKF 255 (329)
Q Consensus 179 ~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~-~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~ 255 (329)
++. .+++.+++|+.+ ..+..||+.+ ..-..... . ....-.++... ++.+++.++.
T Consensus 181 ~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~--~--~~~~v~~~~~~~~~~~l~~~~~-------------- 238 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKD----GKISKYDVSNNYEYVDSID--L--HEKSISDMQFSPDLTYFITSSR-------------- 238 (369)
T ss_dssp EEECGGGCEEEEEETT----SEEEEEETTTTTEEEEEEE--C--CSSCEEEEEECTTSSEEEEEET--------------
T ss_pred EEEcCCCCEEEEEcCC----CEEEEEECCCCcEeEEEEe--c--CCCceeEEEECCCCCEEEEecC--------------
Confidence 222 245566666644 5788999876 33222211 1 11112222222 5566666653
Q ss_pred eceeEEEEcCCcee
Q 020245 256 AGELYSLDTETLVW 269 (329)
Q Consensus 256 ~~~~~~~d~~~~~W 269 (329)
-..+..||+.+..-
T Consensus 239 d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 239 DTNSFLVDVSTLQV 252 (369)
T ss_dssp TSEEEEEETTTCCE
T ss_pred CceEEEEECCCCce
Confidence 23688899887654
No 76
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.02 E-value=0.21 Score=46.63 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=73.3
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCC--C---CCCcceeEEEECCEEEEEccccCCCC
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDV--P---PPRVGVTMAAVGHTIYMFGGRDGTHK 96 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--p---~~r~~~~~~~~~~~iyv~GG~~~~~~ 96 (329)
.+-++.++.||+.... +.++.+|..+.+ |+.-...... + ........+..+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------ 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW--------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------ 136 (677)
T ss_dssp CCCEEETTEEEEECGG--------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------
T ss_pred eCCEEECCEEEEECCC--------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------
Confidence 3445678999997651 579999988665 7653321100 0 00122345567889988642
Q ss_pred CCCceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEecC
Q 020245 97 ELNELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPS 166 (329)
Q Consensus 97 ~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~ 166 (329)
...++.+|..+. .|+.-.............+.++.++.+|+..+.........++.||..+.+ |+.-..
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 209 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSV 209 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccC
Confidence 247999999876 487643311001111222334457888775442222234679999998874 876553
No 77
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.02 E-value=0.12 Score=43.26 Aligned_cols=215 Identities=13% Similarity=0.055 Sum_probs=106.5
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..+..+|+.+.+-....... ..........-+++.++.|+.+ ..+..||..+.+-...-.. .......
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~---~~~~v~~ 169 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG---PVDAWTLAFSPDSQYLATGTHV------GKVNIFGVESGKKEYSLDT---RGKFILS 169 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC---TTCCCCEEECTTSSEEEEECTT------SEEEEEETTTCSEEEEEEC---SSSCEEE
T ss_pred CcEEEEECCCCCEEEEEeCC---CccEEEEEECCCCCEEEEEcCC------CcEEEEEcCCCceeEEecC---CCceEEE
Confidence 57888998876543222211 1111111222245566666544 4678888876653322111 0111111
Q ss_pred eeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCC
Q 020245 128 STAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 128 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
....-++++++.|+.+ ..+..||+.+.+-...-.. ....-.+++. .++++++.|+.+ ..+..||..
T Consensus 170 ~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~~~~----h~~~v~~l~~spd~~~l~s~s~d----g~i~iwd~~ 236 (321)
T 3ow8_A 170 IAYSPDGKYLASGAID-----GIINIFDIATGKLLHTLEG----HAMPIRSLTFSPDSQLLVTASDD----GYIKIYDVQ 236 (321)
T ss_dssp EEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCCCEEEECTTSCEEEEECTT----SCEEEEETT
T ss_pred EEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc----cCCceeEEEEcCCCCEEEEEcCC----CeEEEEECC
Confidence 2222366777777755 4688999988764332221 1111223333 356677777654 468888887
Q ss_pred CCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCC
Q 020245 207 HAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGP 284 (329)
Q Consensus 207 ~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~ 284 (329)
+.+....-. ........+.+ ++..++.|+.+ ..+.++|+.+.+-...-. ...
T Consensus 237 ~~~~~~~~~-----~h~~~v~~~~~sp~~~~l~s~s~D--------------~~v~iwd~~~~~~~~~~~-------~h~ 290 (321)
T 3ow8_A 237 HANLAGTLS-----GHASWVLNVAFCPDDTHFVSSSSD--------------KSVKVWDVGTRTCVHTFF-------DHQ 290 (321)
T ss_dssp TCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT--------------SCEEEEETTTTEEEEEEC-------CCS
T ss_pred CcceeEEEc-----CCCCceEEEEECCCCCEEEEEeCC--------------CcEEEEeCCCCEEEEEEc-------CCC
Confidence 665433221 11111122233 45666666642 357888987664322211 111
Q ss_pred CCcceecccccCCcceEEEEcCCCCCCCcccceEEEec
Q 020245 285 RGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTP 322 (329)
Q Consensus 285 r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~ 322 (329)
..- .+++...+ +..++.||.+. .|.+||.
T Consensus 291 ~~v--~~v~~s~~-g~~l~s~~~d~------~i~vwd~ 319 (321)
T 3ow8_A 291 DQV--WGVKYNGN-GSKIVSVGDDQ------EIHIYDC 319 (321)
T ss_dssp SCE--EEEEECTT-SSEEEEEETTC------CEEEEEC
T ss_pred CcE--EEEEECCC-CCEEEEEeCCC------eEEEEeC
Confidence 111 33333333 45778888654 4555553
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.98 E-value=0.058 Score=46.62 Aligned_cols=107 Identities=7% Similarity=0.050 Sum_probs=57.4
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++++++.|+.+ ..+..||..+.+-...-.. ....-.++.. -++++++.|+.+ ..+..||+.+.+
T Consensus 108 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~ 172 (420)
T 3vl1_A 108 QMRRFILGTTE------GDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGS 172 (420)
T ss_dssp SSCEEEEEETT------SCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCC
T ss_pred CCCEEEEEECC------CCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCc
Confidence 55677777654 4688899887654333111 1111122222 256677777754 468899988764
Q ss_pred EEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 161 WIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
-...-.. ....-.++... ++..++.++.+ ..+..||..+.+-.
T Consensus 173 ~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 173 NPRTLIG----HRATVTDIAIIDRGRNVLSASLD----GTIRLWECGTGTTI 216 (420)
T ss_dssp CCEEEEC----CSSCEEEEEEETTTTEEEEEETT----SCEEEEETTTTEEE
T ss_pred CceEEcC----CCCcEEEEEEcCCCCEEEEEcCC----CcEEEeECCCCcee
Confidence 2111111 11222233333 56667777654 46888888766443
No 79
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.97 E-value=0.13 Score=42.99 Aligned_cols=208 Identities=9% Similarity=-0.018 Sum_probs=105.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+++||+.+... ..+++||+.+.+...+... ....-.+++.. ++++|+..... ......+++||+.+
T Consensus 55 ~g~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE-------GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGD--FKSTGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT-------CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTT--SSSCCEEEEECTTS
T ss_pred CCCEEEEECCC-------CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCC--CCCCceEEEEeCCC
Confidence 56788876532 5799999998887765431 11112233332 56787764322 11235799999988
Q ss_pred CcEEEcccCCCCCCCcccceeEeeCCeEEEEcccC-CCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CC-E
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCG-VSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QG-K 185 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~-~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~ 185 (329)
.+...+-... .+..+.....+.-++++|+..... .......++++|+.+.+...+.... . ....++.. ++ .
T Consensus 122 ~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~-~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 122 DNLQDIIEDL-STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----S-VANGIALSTDEKV 195 (333)
T ss_dssp CSCEEEECSS-SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----S-SEEEEEECTTSSE
T ss_pred CEEEEEEccC-ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----C-cccceEECCCCCE
Confidence 7765332211 011122222233367888754321 1112357899998877666553221 1 11223332 34 4
Q ss_pred EEEEeeeCCCCcccEEEEeCCC--CceEEeeccC--CCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeE
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAH--AQWAQVETSG--EKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELY 260 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~--~~w~~~~~~~--~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 260 (329)
+|+..... ..+++||..+ .....+.... ..+.......++.- ++.+|+.... ...|.
T Consensus 196 l~v~~~~~----~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~--------------~~~v~ 257 (333)
T 2dg1_A 196 LWVTETTA----NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG--------------QGRVL 257 (333)
T ss_dssp EEEEEGGG----TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET--------------TTEEE
T ss_pred EEEEeCCC----CeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC--------------CCEEE
Confidence 77764322 5788999853 2333221000 01111111223222 4577776421 14688
Q ss_pred EEEcCCceeEeecC
Q 020245 261 SLDTETLVWTRWDD 274 (329)
Q Consensus 261 ~~d~~~~~W~~~~~ 274 (329)
+||++...-..+..
T Consensus 258 ~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 258 VFNKRGYPIGQILI 271 (333)
T ss_dssp EECTTSCEEEEEEC
T ss_pred EECCCCCEEEEEEc
Confidence 99987665555553
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.16 Score=43.62 Aligned_cols=146 Identities=7% Similarity=-0.018 Sum_probs=71.7
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++. ++.|+.+ ..+..||..+.+-...-.. ....-......-++++++.|+.+ ..+..||..+.+.
T Consensus 217 ~~~-~~~~~~~------g~i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 217 DDK-FVIPGPK------GAIFVYQITEKTPTGKLIG---HHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNS 281 (425)
T ss_dssp TTE-EEEECGG------GCEEEEETTCSSCSEEECC---CSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSC
T ss_pred CCE-EEEEcCC------CeEEEEEcCCCceeeeecc---CCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCcc
Confidence 444 5555544 4788999887532211111 11111112222356666777644 3578888876542
Q ss_pred EEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcC
Q 020245 162 IQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGG 240 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG 240 (329)
...-.. ....-.++....+.+++.++.+ ..+..||..+.+-...... ......++... ++.+++.|+
T Consensus 282 ~~~~~~----~~~~i~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 282 QNCFYG----HSQSIVSASWVGDDKVISCSMD----GSVRLWSLKQNTLLALSIV----DGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp SEEECC----CSSCEEEEEEETTTEEEEEETT----SEEEEEETTTTEEEEEEEC----TTCCEEEEEECTTSSEEEEEE
T ss_pred ceEecC----CCccEEEEEECCCCEEEEEeCC----CcEEEEECCCCcEeEeccc----CCccEEEEEEcCCCCEEEEEE
Confidence 222211 1222233344433366666544 5788899876654333211 11111222222 456667666
Q ss_pred ccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 241 EVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
.+ ..+.+||+.+..
T Consensus 350 ~d--------------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 350 MD--------------GQVNVYDLKKLN 363 (425)
T ss_dssp TT--------------SCEEEEECHHHH
T ss_pred CC--------------CeEEEEECCCCc
Confidence 42 357788887654
No 81
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.94 E-value=0.14 Score=42.99 Aligned_cols=136 Identities=14% Similarity=0.087 Sum_probs=70.0
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcE
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPG 178 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 178 (329)
..+..||..+.+-...-.. ....-......-++++++.|+.+ ..+..||+.+..-...-.. ....-.+
T Consensus 164 ~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~~~~~~----h~~~v~~ 231 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTG---HTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCRQTFTG----HESDINA 231 (340)
T ss_dssp SCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEEEECC----CSSCEEE
T ss_pred CcEEEEECCCCcEEEEEcC---CCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeEEEEcC----CcCCEEE
Confidence 4688899887753322111 11111111222356777887765 4688899887654332211 1111222
Q ss_pred EEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCee
Q 020245 179 LIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKF 255 (329)
Q Consensus 179 ~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~ 255 (329)
++. .++..++.|+.+ ..+..||..+.+-.... ..+........+.+ ++.+++.|+.+
T Consensus 232 v~~~p~~~~l~s~s~d----~~v~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~g~~d------------- 291 (340)
T 1got_B 232 ICFFPNGNAFATGSDD----ATCRLFDLRADQELMTY---SHDNIICGITSVSFSKSGRLLLAGYDD------------- 291 (340)
T ss_dssp EEECTTSSEEEEEETT----SCEEEEETTTTEEEEEE---CCTTCCSCEEEEEECTTSSEEEEEETT-------------
T ss_pred EEEcCCCCEEEEEcCC----CcEEEEECCCCcEEEEE---ccCCcccceEEEEECCCCCEEEEECCC-------------
Confidence 233 256677777755 46788888765432221 11111112223333 55777777642
Q ss_pred eceeEEEEcCCc
Q 020245 256 AGELYSLDTETL 267 (329)
Q Consensus 256 ~~~~~~~d~~~~ 267 (329)
..+..+|..+.
T Consensus 292 -~~i~vwd~~~~ 302 (340)
T 1got_B 292 -FNCNVWDALKA 302 (340)
T ss_dssp -SEEEEEETTTC
T ss_pred -CeEEEEEcccC
Confidence 36888887654
No 82
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.93 E-value=0.11 Score=43.60 Aligned_cols=149 Identities=11% Similarity=0.055 Sum_probs=72.3
Q ss_pred ceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccce
Q 020245 49 NLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHS 128 (329)
Q Consensus 49 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~ 128 (329)
.++.+|..+.+++.+........+ ...+..-+++||+.+... ....++.||+.+.+++.+..... ....-.+.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p--~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~ 91 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP--TYLALSAKDCLYSVDKED----DEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYV 91 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC--CCEEECTTCEEEEEEEET----TEEEEEEEEEETTEEEEEEEEEE-ESCCCSEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc--ceEEEccCCeEEEEEecC----CCceEEEEEecCCcEEEeeeeec-CCCCCEEE
Confidence 477778888887665432211111 112222356777765321 23578999998777766654210 01111222
Q ss_pred eEeeCC-eEEEEcccCCCcCcceeEEEEcC-CCeEEEecCC---CCCCCCC----CCcEEEE-ECCEEEEEeeeCCCCcc
Q 020245 129 TAADDR-HVYIFGGCGVSGRLNDLWGFDVV-DRKWIQYPSA---GENCKGR----GGPGLIV-TQGKIWVVYGFAGVEVD 198 (329)
Q Consensus 129 ~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~-~~~W~~~~~~---~~~~~~~----~~~~~~~-~~~~l~v~gG~~~~~~~ 198 (329)
+..-++ .||+.+.. . ..+..|++. +.+...+... ...|..+ .-+.++. -++++|+.+... .
T Consensus 92 a~spdg~~l~~~~~~-~----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~----~ 162 (347)
T 3hfq_A 92 AVDEARQLVYSANYH-K----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS----D 162 (347)
T ss_dssp EEETTTTEEEEEETT-T----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT----T
T ss_pred EECCCCCEEEEEeCC-C----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC----C
Confidence 333345 46655422 1 467788874 3343333322 1111111 1122232 356666654322 4
Q ss_pred cEEEEeCC-CCceEEe
Q 020245 199 DVHCFDPA-HAQWAQV 213 (329)
Q Consensus 199 ~~~~~d~~-~~~w~~~ 213 (329)
.+..|++. +.+...+
T Consensus 163 ~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEEECTTSCEEEE
T ss_pred EEEEEEECCCCcEEEe
Confidence 78888887 5555544
No 83
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.90 E-value=0.15 Score=42.62 Aligned_cols=157 Identities=22% Similarity=0.145 Sum_probs=76.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-C-CEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-G-HTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++|+.++.. +.++++|+.+.+....... +.....+.++.. + +.+|+.+.. ...++.+|+.
T Consensus 10 ~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP-------NNLHVVDVASDTVYKSCVM---PDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT-------TEEEEEETTTTEEEEEEEC---SSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETT
T ss_pred CCEEEEEeCCC-------CeEEEEECCCCcEEEEEec---CCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCC
Confidence 66788877542 6899999988765433321 110011223322 3 357776532 3579999998
Q ss_pred CCcEEEcccCCCCCC--CcccceeEe-eCC-eEEEEcccC----CCc---CcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 108 TNQWTLLSNGDAGPP--HRSYHSTAA-DDR-HVYIFGGCG----VSG---RLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~--~r~~~~~~~-~~~-~i~v~GG~~----~~~---~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
+.+-...-..+..+. ...-..++. -++ .+|+. +.. ... ....+..||+.+.+-.+..... ..+...
T Consensus 74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~ 150 (349)
T 1jmx_B 74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT-VNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQV 150 (349)
T ss_dssp TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEE-EEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSC
T ss_pred CCcEEEEEEcccccccccccccceEECCCCCEEEEE-cccccccccccccCCCeEEEEECCCccccceeeec--cCCCcc
Confidence 876543322211010 111122222 244 45544 321 000 1257899998874311110000 011122
Q ss_pred cEEE-EECCEEEEEeeeCCCCcccEEEEeCCCCceEE
Q 020245 177 PGLI-VTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 177 ~~~~-~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~ 212 (329)
.+++ .-++++|+.+ .+++.+|..+.+...
T Consensus 151 ~~~~~s~dg~l~~~~-------~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 151 YLMRAADDGSLYVAG-------PDIYKMDVKTGKYTV 180 (349)
T ss_dssp CCEEECTTSCEEEES-------SSEEEECTTTCCEEE
T ss_pred cceeECCCCcEEEcc-------CcEEEEeCCCCceec
Confidence 2222 2356677643 358888887766543
No 84
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.87 E-value=0.27 Score=45.99 Aligned_cols=215 Identities=13% Similarity=0.095 Sum_probs=106.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCC-------CCCCceE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTH-------KELNELY 102 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~ 102 (329)
+++.+++.-....+. ...++++|+.+++... .. .++........-.-+++.+++....... .....++
T Consensus 131 DG~~la~~~~~~G~~--~~~i~v~dl~tg~~~~-~~--~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 131 DGKKVAFAQKPNAAD--EAVLHVIDVDSGEWSK-VD--VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp TSSEEEEEEEETTCS--CCEEEEEETTTCCBCS-SC--CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred CCCEEEEEECCCCCc--eEEEEEEECCCCCCcC-Cc--ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 555555443222111 2579999999887531 11 1112211112222245555555443110 2345699
Q ss_pred EEECCCCcE--EEcccCCCCCCCcccce-eEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEE
Q 020245 103 SFDTRTNQW--TLLSNGDAGPPHRSYHS-TAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGL 179 (329)
Q Consensus 103 ~~d~~~~~W--~~~~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 179 (329)
.++..+..- ..+-... ..+..... ...-+++..++...... ....++.++..+..+..+.... . .....
T Consensus 206 ~~~l~t~~~~~~lv~~~~--~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~----~-~~~~~ 277 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERT--GDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGV----G-AKYEV 277 (695)
T ss_dssp EEETTSCGGGCEEEECCC--CCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECS----S-CCEEE
T ss_pred EEECCCCchhceEEEecC--CCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCC----C-ceEEE
Confidence 999887652 2222221 11111122 22234554444443221 3357788877777788777542 1 12222
Q ss_pred EEECCEEEEEeeeCCCCcccEEEEeCCCCc---eEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeee
Q 020245 180 IVTQGKIWVVYGFAGVEVDDVHCFDPAHAQ---WAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFA 256 (329)
Q Consensus 180 ~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~---w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~ 256 (329)
+..++.+|+... .+.....++.+|.++.. |+.+.... + ......+...++.+++....+. .
T Consensus 278 ~~~~g~l~~~s~-~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~-~~~l~~~~~~~~~lv~~~~~dg------------~ 341 (695)
T 2bkl_A 278 HAWKDRFYVLTD-EGAPRQRVFEVDPAKPARASWKEIVPED--S-SASLLSVSIVGGHLSLEYLKDA------------T 341 (695)
T ss_dssp EEETTEEEEEEC-TTCTTCEEEEEBTTBCSGGGCEEEECCC--S-SCEEEEEEEETTEEEEEEEETT------------E
T ss_pred EecCCcEEEEEC-CCCCCCEEEEEeCCCCCccCCeEEecCC--C-CCeEEEEEEECCEEEEEEEECC------------E
Confidence 335666555432 22234689999986654 88876421 1 1222233344778877764321 4
Q ss_pred ceeEEEEcCCceeEeec
Q 020245 257 GELYSLDTETLVWTRWD 273 (329)
Q Consensus 257 ~~~~~~d~~~~~W~~~~ 273 (329)
..++.+|+....-+.+.
T Consensus 342 ~~l~~~~~~g~~~~~l~ 358 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQ 358 (695)
T ss_dssp EEEEEEETTCCEEEECC
T ss_pred EEEEEEeCCCCeeEEec
Confidence 57899998655444443
No 85
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.87 E-value=0.16 Score=42.53 Aligned_cols=196 Identities=13% Similarity=0.095 Sum_probs=99.5
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCC-----CCcceeEEEE--CCEEEEEccccCCCCCCCceEE
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPP-----PRVGVTMAAV--GHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~-----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
+.+|+.+.. .+.+..+|+.+.+-........... +..-+.++.. ++.+|+.+... ...++.
T Consensus 101 ~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~ 168 (353)
T 3vgz_A 101 QTLWFGNTV-------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWV 168 (353)
T ss_dssp TEEEEEETT-------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEE
T ss_pred CEEEEEecC-------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEE
Confidence 357776553 1579999998877533222211000 1111223332 35677765221 356999
Q ss_pred EECCCCcEEEccc-CCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE
Q 020245 104 FDTRTNQWTLLSN-GDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV 181 (329)
Q Consensus 104 ~d~~~~~W~~~~~-~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 181 (329)
+|+.+.+-...-. .+. ........- ++.+|+... ...+..+|+.+.+-.................++.
T Consensus 169 ~d~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGK----MSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EETTTTEEEEEECCCCT----TCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred EcCCCCceEEEecCCCC----ccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 9998876443322 211 111122222 345666543 1578899999887544333321101111222333
Q ss_pred E-C-CEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEEC-CEEEEEcCccCCCCCCcCCCCeeece
Q 020245 182 T-Q-GKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIG-KHIVVYGGEVDPSDLGHLGAGKFAGE 258 (329)
Q Consensus 182 ~-~-~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~-~~i~i~GG~~~~~~~~~~~~~~~~~~ 258 (329)
. + +.+|+.... ...++.||+.+.+....... +.+ ...+..-+ +.+|+.... ...
T Consensus 239 s~dg~~l~~~~~~----~~~v~~~d~~~~~~~~~~~~---~~~--~~~~~s~dg~~l~v~~~~--------------~~~ 295 (353)
T 3vgz_A 239 DTARQRAFITDSK----AAEVLVVDTRNGNILAKVAA---PES--LAVLFNPARNEAYVTHRQ--------------AGK 295 (353)
T ss_dssp ETTTTEEEEEESS----SSEEEEEETTTCCEEEEEEC---SSC--CCEEEETTTTEEEEEETT--------------TTE
T ss_pred CCCCCEEEEEeCC----CCEEEEEECCCCcEEEEEEc---CCC--ceEEECCCCCEEEEEECC--------------CCe
Confidence 3 3 446665432 26899999987766544322 222 12222223 467776542 247
Q ss_pred eEEEEcCCceeEe
Q 020245 259 LYSLDTETLVWTR 271 (329)
Q Consensus 259 ~~~~d~~~~~W~~ 271 (329)
+.++|+.+.+...
T Consensus 296 v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 296 VSVIDAKSYKVVK 308 (353)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCeEEE
Confidence 8999998776443
No 86
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.86 E-value=0.14 Score=43.42 Aligned_cols=220 Identities=12% Similarity=-0.001 Sum_probs=103.0
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
..|..||+.+++-....... .......-.++.+ +++.++.|+.+ ..+..+|..+++-...-. + ....-
T Consensus 103 g~v~lWd~~~~~~~~~~~~~-~~~H~~~V~~v~~spdg~~l~sgs~d------~~i~iwd~~~~~~~~~~~-~--h~~~V 172 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFC-KYEHDDIVSTVSVLSSGTQAVSGSKD------ICIKVWDLAQQVVLSSYR-A--HAAQV 172 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEE-EECCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEEC-C--CSSCE
T ss_pred CEEEEEeccCCCceeEeecc-ccCCCCCEEEEEECCCCCEEEEEeCC------CeEEEEECCCCcEEEEEc-C--cCCce
Confidence 56888888776532211100 0001111122233 45667777655 468889998875322211 1 01111
Q ss_pred cceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEE
Q 020245 126 YHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHC 202 (329)
Q Consensus 126 ~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~ 202 (329)
....... +..+++.|+.+ ..+..||+.+.+-...-... .......+++.. ++++++.|+.+ ..+..
T Consensus 173 ~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~l~sg~~d----g~v~~ 241 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCS--APGYLPTSLAWHPQQSEVFVFGDEN----GTVSL 241 (344)
T ss_dssp EEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEEEEETT----SEEEE
T ss_pred EEEEecCCCCCceeeeccc-----cccccccccccceeeeeecc--eeeccceeeeecCCCCcceEEeccC----CcEEE
Confidence 1111112 33577777765 45888999877643322221 111111222222 45577777654 46788
Q ss_pred EeCCCCceE-EeeccCCCCCCcceeEEEEE--CC-EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCC
Q 020245 203 FDPAHAQWA-QVETSGEKPTARSVFSTVGI--GK-HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGS 278 (329)
Q Consensus 203 ~d~~~~~w~-~~~~~~~~p~~r~~~~~~~~--~~-~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~ 278 (329)
||..+.+-. .+. .......++.+ ++ .+++.|+.+ ..|.++|..+.+-..+..
T Consensus 242 wd~~~~~~~~~~~------~h~~~v~~v~fsp~g~~~lasgs~D--------------~~i~vwd~~~~~~~~~~~---- 297 (344)
T 4gqb_B 242 VDTKSTSCVLSSA------VHSQCVTGLVFSPHSVPFLASLSED--------------CSLAVLDSSLSELFRSQA---- 297 (344)
T ss_dssp EESCC--CCEEEE------CCSSCEEEEEECSSSSCCEEEEETT--------------SCEEEECTTCCEEEEECC----
T ss_pred EECCCCcEEEEEc------CCCCCEEEEEEccCCCeEEEEEeCC--------------CeEEEEECCCCcEEEEcC----
Confidence 888655321 111 11111122233 33 566666542 357788988775433321
Q ss_pred CCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 279 DHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 279 ~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
....- .+++...+.+.+++.||.+. .|..+++.+
T Consensus 298 ----H~~~V--~~v~~sp~~~~llas~s~D~------~v~~w~v~~ 331 (344)
T 4gqb_B 298 ----HRDFV--RDATWSPLNHSLLTTVGWDH------QVVHHVVPT 331 (344)
T ss_dssp ----CSSCE--EEEEECSSSTTEEEEEETTS------CEEEEECCC
T ss_pred ----CCCCE--EEEEEeCCCCeEEEEEcCCC------eEEEEECCC
Confidence 11111 23333322145888888765 345555444
No 87
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.83 E-value=0.17 Score=42.11 Aligned_cols=150 Identities=8% Similarity=-0.030 Sum_probs=71.8
Q ss_pred eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEe
Q 020245 135 HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQV 213 (329)
Q Consensus 135 ~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~ 213 (329)
.+++.|+.+ ..+..||..+.+....... ....-.+++. .++++++.|+.+ ..+..||..+.+-...
T Consensus 186 ~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s~D----g~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 186 PIIVSCGWD-----KLVKVWNLANCKLKTNHIG----HTGYLNTVTVSPDGSLCASGGKD----GQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEETT----CEEEEEETTTTEEEEE
T ss_pred cEEEEEcCC-----CEEEEEECCCCceeeEecC----CCCcEEEEEECCCCCEEEEEeCC----CeEEEEEeccCceeee
Confidence 455666644 3578899988765443322 1112222332 256677777755 4678888866543322
Q ss_pred eccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe-ecCCCCCCCC-CCCCCcceec
Q 020245 214 ETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR-WDDGPGSDHH-PGPRGWCAFA 291 (329)
Q Consensus 214 ~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~~~~-p~~r~~~~~~ 291 (329)
.. ......++....+..++.++.+ ..+.++|+++..-.. +......... .....- .+
T Consensus 253 ~~-----~~~~v~~~~~~~~~~~~~~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v--~~ 311 (340)
T 4aow_A 253 LD-----GGDIINALCFSPNRYWLCAATG--------------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC--TS 311 (340)
T ss_dssp EE-----CSSCEEEEEECSSSSEEEEEET--------------TEEEEEETTTTEEEEEECCC-------CCCCCE--EE
T ss_pred ec-----CCceEEeeecCCCCceeeccCC--------------CEEEEEECCCCeEEEeccccceeeeccCCCCCE--EE
Confidence 21 1111222323334444555531 357788887664322 2210000000 011111 23
Q ss_pred ccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 292 GGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 292 ~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
++...+ +.+++.||.+. .|.+||+++-
T Consensus 312 l~~s~d-g~~l~sgs~Dg------~v~iW~~~tG 338 (340)
T 4aow_A 312 LAWSAD-GQTLFAGYTDN------LVRVWQVTIG 338 (340)
T ss_dssp EEECTT-SSEEEEEETTS------CEEEEEEEC-
T ss_pred EEECCC-CCEEEEEeCCC------EEEEEeCCCc
Confidence 333333 45788888654 5777777653
No 88
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.80 E-value=0.02 Score=48.82 Aligned_cols=106 Identities=12% Similarity=0.113 Sum_probs=55.8
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-C-CEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-Q-GKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~-~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
+++.++.|+.+ ..+..||..+.+-...-.. ....-.+++.. + +.+++.++.+ ..+..||..+.+-
T Consensus 150 dg~~l~sgs~d-----g~v~iwd~~~~~~~~~~~~----h~~~v~~v~~s~~~~~~~~s~~~d----g~v~~wd~~~~~~ 216 (357)
T 4g56_B 150 DGTQAVSGGKD-----FSVKVWDLSQKAVLKSYNA----HSSEVNCVAACPGKDTIFLSCGED----GRILLWDTRKPKP 216 (357)
T ss_dssp SSSEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTCSSCEEEEETT----SCEEECCTTSSSC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEcC----CCCCEEEEEEccCCCceeeeeccC----CceEEEECCCCce
Confidence 66777777765 3588899988764433222 11112222222 2 3466677654 4677788766543
Q ss_pred EEeeccCCCCCCcceeEEEEE---CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 211 AQVETSGEKPTARSVFSTVGI---GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 211 ~~~~~~~~~p~~r~~~~~~~~---~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
..... .........++.+ ++.+++.|+.+ ..|..||+.+.+
T Consensus 217 ~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d--------------~~i~~wd~~~~~ 260 (357)
T 4g56_B 217 ATRID---FCASDTIPTSVTWHPEKDDTFACGDET--------------GNVSLVNIKNPD 260 (357)
T ss_dssp BCBCC---CTTCCSCEEEEEECTTSTTEEEEEESS--------------SCEEEEESSCGG
T ss_pred eeeee---eccccccccchhhhhcccceEEEeecc--------------cceeEEECCCCc
Confidence 22211 1111112223333 34677777642 357888887653
No 89
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.80 E-value=0.13 Score=43.42 Aligned_cols=157 Identities=10% Similarity=0.158 Sum_probs=82.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.||.+ ..+..||..+.+|....... ......-..+.+ ++++++.|+.+ ..+..+|..
T Consensus 27 ~g~~las~~~D-------~~i~iw~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~ 91 (345)
T 3fm0_A 27 AGTLLASCGGD-------RRIRIWGTEGDSWICKSVLS--EGHQRTVRKVAWSPCGNYLASASFD------ATTCIWKKN 91 (345)
T ss_dssp TSSCEEEEETT-------SCEEEEEEETTEEEEEEEEC--SSCSSCEEEEEECTTSSEEEEEETT------SCEEEEEEC
T ss_pred CCCEEEEEcCC-------CeEEEEEcCCCcceeeeeec--cccCCcEEEEEECCCCCEEEEEECC------CcEEEEEcc
Confidence 56777777743 56888888887775433211 011111223333 45666777655 356777877
Q ss_pred CCcEEEcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCC-eEEEecCCCCCCCCCCCcEEEE-ECC
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDR-KWIQYPSAGENCKGRGGPGLIV-TQG 184 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~-~W~~~~~~~~~~~~~~~~~~~~-~~~ 184 (329)
+..+..+.... .....-.++. .-++++++.|+.+ ..+..||+.+. .+..+.... .....-.+++. -++
T Consensus 92 ~~~~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 92 QDDFECVTTLE--GHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLN--SHTQDVKHVVWHPSQ 162 (345)
T ss_dssp CC-EEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEEC--CCCSCEEEEEECSSS
T ss_pred CCCeEEEEEcc--CCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEec--CcCCCeEEEEECCCC
Confidence 77665444331 0111111222 2256777777765 35788887764 333333221 01111122222 246
Q ss_pred EEEEEeeeCCCCcccEEEEeCCCCceEEee
Q 020245 185 KIWVVYGFAGVEVDDVHCFDPAHAQWAQVE 214 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~ 214 (329)
.+++.|+.+ ..+..||..+..|..+.
T Consensus 163 ~~l~s~s~d----~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 163 ELLASASYD----DTVKLYREEEDDWVCCA 188 (345)
T ss_dssp SCEEEEETT----SCEEEEEEETTEEEEEE
T ss_pred CEEEEEeCC----CcEEEEEecCCCEEEEE
Confidence 677777655 46777888777776544
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.79 E-value=0.22 Score=42.93 Aligned_cols=177 Identities=15% Similarity=0.080 Sum_probs=92.9
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
..+..||..+.+........ ... .-.++.+ ++.+++.|+.+ ..+..||..+.+-...-.. ...
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~-~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~-----~~~ 177 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---EST-YVASVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRTMAG-----HQA 177 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTC-CEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECC-----CSS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCC-CEEEEEECCCCCEEEEECCC------CeEEEEECcCCeEEEEecC-----CCC
Confidence 67999999988876554421 111 1222233 45566666544 4688899887653322211 112
Q ss_pred cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEE
Q 020245 126 YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHC 202 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~ 202 (329)
....+..++.+++.|+.+ ..+..||+.+.. -..+.. ....-.++... ++.+++.|+.+ ..+..
T Consensus 178 ~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d----~~v~i 243 (401)
T 4aez_A 178 RVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQG-----HSSEVCGLAWRSDGLQLASGGND----NVVQI 243 (401)
T ss_dssp CEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSSEEEEEETT----SCEEE
T ss_pred ceEEEEECCCEEEEEcCC-----CCEEEEecccCcceeeEEcC-----CCCCeeEEEEcCCCCEEEEEeCC----CeEEE
Confidence 222333466777777754 468888887432 222221 11122222332 56677777755 57888
Q ss_pred EeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCcee
Q 020245 203 FDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVW 269 (329)
Q Consensus 203 ~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 269 (329)
||..+.+-..... . ....-.++... +..+++.|+... -..+..||+.+..-
T Consensus 244 wd~~~~~~~~~~~--~--~~~~v~~~~~~p~~~~ll~~~~gs~------------d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 244 WDARSSIPKFTKT--N--HNAAVKAVAWCPWQSNLLATGGGTM------------DKQIHFWNAATGAR 296 (401)
T ss_dssp EETTCSSEEEEEC--C--CSSCCCEEEECTTSTTEEEEECCTT------------TCEEEEEETTTCCE
T ss_pred ccCCCCCccEEec--C--CcceEEEEEECCCCCCEEEEecCCC------------CCEEEEEECCCCCE
Confidence 9987654332221 1 11111222222 446777764211 24688999876643
No 91
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.78 E-value=0.17 Score=41.62 Aligned_cols=231 Identities=10% Similarity=-0.030 Sum_probs=115.4
Q ss_pred ceeEEEE--CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCC
Q 020245 23 SHAITIV--GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELN 99 (329)
Q Consensus 23 ~~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 99 (329)
.-+.+.. ++.||+..... +.+++||+.+.+....... .+. .+++. -++++|+.. .+
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~-------~~i~~~d~~~~~~~~~~~~-----~~~-~~i~~~~dG~l~v~~--------~~ 73 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA-------KKVCRWDSFTKQVQRVTMD-----APV-SSVALRQSGGYVATI--------GT 73 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEECS-----SCE-EEEEEBTTSSEEEEE--------TT
T ss_pred ccCCeEECCCCEEEEEECCC-------CEEEEEECCCCcEEEEeCC-----Cce-EEEEECCCCCEEEEE--------CC
Confidence 3344444 46888876532 6799999998776544321 111 22222 245666642 24
Q ss_pred ceEEEECCCCcEEEcccCCC-CCCCcccceeEeeCCeEEEEcccCC------CcCcceeEEEEcCCCeEEEecCCCCCCC
Q 020245 100 ELYSFDTRTNQWTLLSNGDA-GPPHRSYHSTAADDRHVYIFGGCGV------SGRLNDLWGFDVVDRKWIQYPSAGENCK 172 (329)
Q Consensus 100 ~~~~~d~~~~~W~~~~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~------~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 172 (329)
.+++||+.+.+++.+..... .+..+.....+.-++++|+..-... ......++++++.. +...+....
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~---- 148 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQV---- 148 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEE----
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecc----
Confidence 79999999988877655421 1222333334444678777421111 11235788888753 333322211
Q ss_pred CCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeC--CCCceEEeeccCCCCC-CcceeEEEEE-CCEEEEEcCccCCCC
Q 020245 173 GRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDP--AHAQWAQVETSGEKPT-ARSVFSTVGI-GKHIVVYGGEVDPSD 246 (329)
Q Consensus 173 ~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~--~~~~w~~~~~~~~~p~-~r~~~~~~~~-~~~i~i~GG~~~~~~ 246 (329)
.....++.. ++ .+|+..... ..+++|+. .+............+. .....+++.- ++.||+....
T Consensus 149 -~~pngi~~spdg~~lyv~~~~~----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~----- 218 (297)
T 3g4e_A 149 -DISNGLDWSLDHKIFYYIDSLS----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN----- 218 (297)
T ss_dssp -SBEEEEEECTTSCEEEEEEGGG----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-----
T ss_pred -ccccceEEcCCCCEEEEecCCC----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-----
Confidence 111223332 34 577775432 57888876 4444321110001111 1122233332 5688876421
Q ss_pred CCcCCCCeeeceeEEEEcCCce-eEeecCCCCCCCCCCCCCcceeccccc-CCcceEEEEcCCC
Q 020245 247 LGHLGAGKFAGELYSLDTETLV-WTRWDDGPGSDHHPGPRGWCAFAGGLR-GGKHGLLVYGGNS 308 (329)
Q Consensus 247 ~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~p~~r~~~~~~~~~~-~~~~~i~i~GG~~ 308 (329)
...|.+||+++.+ -..+.. |..+. .+++.- .+.+.|||.....
T Consensus 219 ---------~~~v~~~d~~tG~~~~~i~~-------p~~~~---t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 ---------GGRVIRLDPVTGKRLQTVKL-------PVDKT---TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ---------TTEEEEECTTTCCEEEEEEC-------SSSBE---EEEEEESGGGCEEEEEEBCT
T ss_pred ---------CCEEEEEcCCCceEEEEEEC-------CCCCc---eEEEEeCCCCCEEEEEcCCc
Confidence 1369999998554 344443 43322 222222 2225688876543
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.19 Score=42.11 Aligned_cols=68 Identities=9% Similarity=0.092 Sum_probs=38.1
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCC-CeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVD-RKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
+++.++.|+.+ ..+..||+.+ .+-...-.. ....-.+++.. ++..++.++.+ ..+..||..+.+.
T Consensus 186 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 186 KGKYIIAGHKD-----GKISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSRD----TNSFLVDVSTLQV 252 (369)
T ss_dssp GGCEEEEEETT-----SEEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEETT----SEEEEEETTTCCE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecCC----ceEEEEECCCCce
Confidence 55666666654 4689999987 333222221 11122223332 56666666644 4788899877655
Q ss_pred EEe
Q 020245 211 AQV 213 (329)
Q Consensus 211 ~~~ 213 (329)
...
T Consensus 253 ~~~ 255 (369)
T 3zwl_B 253 LKK 255 (369)
T ss_dssp EEE
T ss_pred eee
Confidence 443
No 93
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.75 E-value=0.063 Score=45.51 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=55.2
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
+++.++.|+.+ ..+..||+.+++-...-.. ....-.++... ++ .+++.++.+ ..+..||..+.+-
T Consensus 138 dg~~l~sgs~d-----~~i~iwd~~~~~~~~~~~~----h~~~V~~~~~~~~~~~~l~s~s~D----~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 138 SGTQAVSGSKD-----ICIKVWDLAQQVVLSSYRA----HAAQVTCVAASPHKDSVFLSCSED----NRILLWDTRCPKP 204 (344)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEECSSCTTEEEEEETT----SCEEEEETTSSSC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEcC----cCCceEEEEecCCCCCceeeeccc----cccccccccccce
Confidence 66777777765 3688899988764332221 11111222222 33 477777755 4678889877654
Q ss_pred EEeeccCCCCCCcceeEEEEE---CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 211 AQVETSGEKPTARSVFSTVGI---GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 211 ~~~~~~~~~p~~r~~~~~~~~---~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
..... .........++.+ ++.+++.|+.+ ..|.++|+++.
T Consensus 205 ~~~~~---~~~~~~~~~~~~~~p~~~~~l~sg~~d--------------g~v~~wd~~~~ 247 (344)
T 4gqb_B 205 ASQIG---CSAPGYLPTSLAWHPQQSEVFVFGDEN--------------GTVSLVDTKST 247 (344)
T ss_dssp EEECC-------CCCEEEEEECSSCTTEEEEEETT--------------SEEEEEESCC-
T ss_pred eeeee---cceeeccceeeeecCCCCcceEEeccC--------------CcEEEEECCCC
Confidence 33221 1111111122222 45677777642 35778888755
No 94
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.75 E-value=0.14 Score=41.16 Aligned_cols=185 Identities=11% Similarity=0.080 Sum_probs=95.5
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+++||+... . +.+.+||+.......+... ....-..++.. ++++|+.... ...+.++|..+
T Consensus 77 ~g~l~v~~~--~------~~i~~~d~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~ 138 (270)
T 1rwi_B 77 AGTVYVTDF--N------NRVVTLAAGSNNQTVLPFD----GLNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGS 138 (270)
T ss_dssp TCCEEEEET--T------TEEEEECTTCSCCEECCCC----SCSSEEEEEECTTCCEEEEEGG------GTEEEEECTTC
T ss_pred CCCEEEEcC--C------CEEEEEeCCCceEeeeecC----CcCCCcceEECCCCCEEEEECC------CCEEEEEECCC
Confidence 456777654 1 5688899887654433221 11112233333 4678886432 24688888766
Q ss_pred CcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcE-EEEE-CCEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPG-LIVT-QGKI 186 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~~~-~~~l 186 (329)
.......... .......+..-++++|+..... ..+.+||+.+..-...... ...... ++.. ++.+
T Consensus 139 ~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~-----~~~~p~~i~~d~~g~l 205 (270)
T 1rwi_B 139 KTQTVLPFTG---LNDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQVVLPFT-----DITAPWGIAVDEAGTV 205 (270)
T ss_dssp CSCEECCCCS---CCSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEEECCCS-----SCCSEEEEEECTTCCE
T ss_pred ceeEeecccc---CCCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceEeeccc-----CCCCceEEEECCCCCE
Confidence 5544332211 1111122222367888875421 4689999887764433221 112222 3332 4578
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
|+..... ..+.+|++....-...... ......+++.- ++.||+.... .+.|.+|+..
T Consensus 206 ~v~~~~~----~~v~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~~--------------~~~v~~~~~~ 263 (270)
T 1rwi_B 206 YVTEHNT----NQVVKLLAGSTTSTVLPFT----GLNTPLAVAVDSDRTVYVADRG--------------NDRVVKLTSL 263 (270)
T ss_dssp EEEETTT----SCEEEECTTCSCCEECCCC----SCSCEEEEEECTTCCEEEEEGG--------------GTEEEEECCC
T ss_pred EEEECCC----CcEEEEcCCCCcceeeccC----CCCCceeEEECCCCCEEEEECC--------------CCEEEEEcCC
Confidence 8865322 5789999876544332211 11222333332 4578887653 2467888776
Q ss_pred Cc
Q 020245 266 TL 267 (329)
Q Consensus 266 ~~ 267 (329)
..
T Consensus 264 ~~ 265 (270)
T 1rwi_B 264 EH 265 (270)
T ss_dssp GG
T ss_pred Cc
Confidence 44
No 95
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.74 E-value=0.19 Score=41.42 Aligned_cols=249 Identities=11% Similarity=0.049 Sum_probs=118.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-C-CEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-G-HTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.+|+..............+++||+.+.++..+...........-..++.. + ++||+... .+.+++||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~~~l~~~d~~ 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------RLGLLVVQTD 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------TTEEEEEETT
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------CCCEEEEeCC
Confidence 5688887211000011126799999988888765431000000111233332 4 68888753 1369999998
Q ss_pred CCcEEEc-ccCCC-CCCCcccceeEeeCCeEEEEcccC----------CCcCcceeEEEEcCCCeEEEecCCCCCCCCCC
Q 020245 108 TNQWTLL-SNGDA-GPPHRSYHSTAADDRHVYIFGGCG----------VSGRLNDLWGFDVVDRKWIQYPSAGENCKGRG 175 (329)
Q Consensus 108 ~~~W~~~-~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~----------~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 175 (329)
++...+ ..... .+..+....+..-++++|+..... .......++++++. .+...+.... . .
T Consensus 101 -g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~-~ 173 (314)
T 1pjx_A 101 -GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF----Q-F 173 (314)
T ss_dssp -SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE----S-S
T ss_pred -CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC----C-C
Confidence 777665 33211 111122222233467888765422 11123578889877 5555443211 1 1
Q ss_pred CcEEEEE-----CC-EEEEEeeeCCCCcccEEEEeCC-CCceEEeeccCCCCCC--cceeEEEEE-CCEEEEEcCccCCC
Q 020245 176 GPGLIVT-----QG-KIWVVYGFAGVEVDDVHCFDPA-HAQWAQVETSGEKPTA--RSVFSTVGI-GKHIVVYGGEVDPS 245 (329)
Q Consensus 176 ~~~~~~~-----~~-~l~v~gG~~~~~~~~~~~~d~~-~~~w~~~~~~~~~p~~--r~~~~~~~~-~~~i~i~GG~~~~~ 245 (329)
....+.. ++ .+|+.... ...+++||.+ +.+..........+.. .....++.- ++.||+....
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~---- 245 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETP----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG---- 245 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETT----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET----
T ss_pred cceEEEecccCCCCCEEEEEECC----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC----
Confidence 1223333 34 46665432 2578888875 3433221110011111 112233322 5678876421
Q ss_pred CCCcCCCCeeeceeEEEEcCCce-eEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 246 DLGHLGAGKFAGELYSLDTETLV-WTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 246 ~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
...|.+||+++.+ -..+.. +.. .- .+++.-.+...||+....+ +.|++|++..
T Consensus 246 ----------~~~i~~~d~~~g~~~~~~~~-------~~~-~~--~~i~~~~dg~~l~v~~~~~------~~l~~~~~~~ 299 (314)
T 1pjx_A 246 ----------SSHIEVFGPDGGQPKMRIRC-------PFE-KP--SNLHFKPQTKTIFVTEHEN------NAVWKFEWQR 299 (314)
T ss_dssp ----------TTEEEEECTTCBSCSEEEEC-------SSS-CE--EEEEECTTSSEEEEEETTT------TEEEEEECSS
T ss_pred ----------CCEEEEEcCCCCcEeEEEeC-------CCC-Cc--eeEEECCCCCEEEEEeCCC------CeEEEEeCCC
Confidence 2468899988443 233332 322 11 2333323313366655422 4789999876
Q ss_pred CC
Q 020245 325 DG 326 (329)
Q Consensus 325 ~~ 326 (329)
..
T Consensus 300 ~g 301 (314)
T 1pjx_A 300 NG 301 (314)
T ss_dssp CB
T ss_pred CC
Confidence 43
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.18 Score=42.54 Aligned_cols=107 Identities=7% Similarity=0.051 Sum_probs=60.8
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eC--CeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DD--RHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~--~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
+.+++.|+.+ ..+..||.....+..+.... .....-.++.. .+ +.+++.|+.+ ..+..||..+.
T Consensus 23 ~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~ 89 (379)
T 3jrp_A 23 GKRLATCSSD------KTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENG 89 (379)
T ss_dssp SSEEEEEETT------SCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETT
T ss_pred CCEEEEEECC------CcEEEEecCCCcceeeeEec--CCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCC
Confidence 4556666544 35778887766666554442 11111122222 12 6777777764 46889999999
Q ss_pred eEEEecCCCCCCCCCCCcEEEEE-C--CEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 160 KWIQYPSAGENCKGRGGPGLIVT-Q--GKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 160 ~W~~~~~~~~~~~~~~~~~~~~~-~--~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
+|..+..... ....-.++... + +.+++.++.+ ..+..||....
T Consensus 90 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~ 135 (379)
T 3jrp_A 90 RWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSD----GKVSVVEFKEN 135 (379)
T ss_dssp EEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT----SEEEEEECCTT
T ss_pred ceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecCC----CcEEEEecCCC
Confidence 8877766531 22222233333 2 5677777654 57788888665
No 97
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.65 E-value=0.4 Score=45.28 Aligned_cols=188 Identities=11% Similarity=0.149 Sum_probs=96.8
Q ss_pred CceEEEeCCCCcEEEEeeCCCCC--CCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC------CcEE---Ecc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVP--PPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT------NQWT---LLS 115 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p--~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~------~~W~---~~~ 115 (329)
..+.+||+.+.+++......... ....-.++... ++.|+|- ... ..+++||+.+ ..+. ...
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL------GGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS------SCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC------CceEEEccccccccCCcceecccccc
Confidence 46889999998887765321111 11111222222 4578773 211 3477887653 1221 111
Q ss_pred cCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeC
Q 020245 116 NGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFA 193 (329)
Q Consensus 116 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~ 193 (329)
.....+...-...+..-++.|++++|.. .-+.+||+.+++++.+.... ........+... ++.|++- ..
T Consensus 465 ~~~~l~~~~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~--~~~~~~~~~i~~d~~g~lWig-t~- 535 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFADE--LTGEKSPNYLLCDEDGLLWVG-FH- 535 (758)
T ss_dssp GGGTCSCSCEEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTTT--SCGGGCEEEEEECTTSCEEEE-ET-
T ss_pred cccccccceeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCCC--cCCCcccceEEECCCCCEEEE-ec-
Confidence 1111111111111222367899866643 34899999999998875321 111111222222 4668763 32
Q ss_pred CCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeec
Q 020245 194 GVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWD 273 (329)
Q Consensus 194 ~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 273 (329)
.-+.+||+.+.+++.... ..+|.. ...+++.-++.|++-.. ..+.+||+++.+.+...
T Consensus 536 ----~Gl~~~~~~~~~~~~~~~-~gl~~~-~i~~i~~~~g~lWi~t~----------------~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 536 ----GGVMRINPKDESQQSISF-GSFSNN-EILSMTCVKNSIWVSTT----------------NGLWIIDRKTMDARQQN 593 (758)
T ss_dssp ----TEEEEECC--CCCCBCCC-CC---C-CEEEEEEETTEEEEEES----------------SCEEEEETTTCCEEEC-
T ss_pred ----CceEEEecCCCceEEecc-cCCCcc-ceEEEEECCCCEEEECC----------------CCeEEEcCCCceeEEec
Confidence 368999998887766542 233332 23344444678887542 46899999998877654
No 98
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.63 E-value=0.14 Score=43.54 Aligned_cols=186 Identities=11% Similarity=-0.016 Sum_probs=90.3
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-e-CCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-D-DRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
+++.++.|+.+ ..+..||..+.+-...-.. ....-.++.. . ++.+++.++.+ ..+..||+.+.
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~~~~~~~~----h~~~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~ 214 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKAVLKSYNA----HSSEVNCVAACPGKDTIFLSCGED-----GRILLWDTRKP 214 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTCSSCEEEEETT-----SCEEECCTTSS
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEcC----CCCCEEEEEEccCCCceeeeeccC-----CceEEEECCCC
Confidence 45666777655 4688899888754322111 1111111222 2 33567777754 35778888776
Q ss_pred eEEEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CC-E
Q 020245 160 KWIQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GK-H 234 (329)
Q Consensus 160 ~W~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~-~ 234 (329)
+-....... .......+++.. ++.+++.|+.+ ..+..||+.+.+-..... .......++.+ ++ .
T Consensus 215 ~~~~~~~~~--~~~~~v~~v~~sp~~~~~la~g~~d----~~i~~wd~~~~~~~~~~~-----~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 215 KPATRIDFC--ASDTIPTSVTWHPEKDDTFACGDET----GNVSLVNIKNPDSAQTSA-----VHSQNITGLAYSYHSSP 283 (357)
T ss_dssp SCBCBCCCT--TCCSCEEEEEECTTSTTEEEEEESS----SCEEEEESSCGGGCEEEC-----CCSSCEEEEEECSSSSC
T ss_pred ceeeeeeec--cccccccchhhhhcccceEEEeecc----cceeEEECCCCcEeEEEe-----ccceeEEEEEEcCCCCC
Confidence 532222221 111111222222 35677777654 468888886654222111 11111122233 33 5
Q ss_pred EEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccC-CcceEEEEcCCCCCCCc
Q 020245 235 IVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRG-GKHGLLVYGGNSPSNDR 313 (329)
Q Consensus 235 i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~-~~~~i~i~GG~~~~~~~ 313 (329)
+++.|+.+ ..|.++|+++.+-...-. ....- .+++.-. + +.+++.||.+.
T Consensus 284 ~lasgs~D--------------~~i~iwd~~~~~~~~~~~--------H~~~V--~~vafsP~d-~~~l~s~s~Dg---- 334 (357)
T 4g56_B 284 FLASISED--------------CTVAVLDADFSEVFRDLS--------HRDFV--TGVAWSPLD-HSKFTTVGWDH---- 334 (357)
T ss_dssp CEEEEETT--------------SCEEEECTTSCEEEEECC--------CSSCE--EEEEECSSS-TTEEEEEETTS----
T ss_pred EEEEEeCC--------------CEEEEEECCCCcEeEECC--------CCCCE--EEEEEeCCC-CCEEEEEcCCC----
Confidence 66666532 357888988765433221 11111 2333321 2 44888888764
Q ss_pred ccceEEEeccc
Q 020245 314 LDDIYFFTPCL 324 (329)
Q Consensus 314 ~~~v~~~~~~~ 324 (329)
.|.++++.+
T Consensus 335 --~v~iW~~~~ 343 (357)
T 4g56_B 335 --KVLHHHLPS 343 (357)
T ss_dssp --CEEEEECC-
T ss_pred --eEEEEECCC
Confidence 466677644
No 99
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.62 E-value=0.3 Score=42.30 Aligned_cols=147 Identities=10% Similarity=0.003 Sum_probs=74.6
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.+++.|+.+ ..+..||..+.+....-. .....-..+.+ ++++++.|+.+ ..+..||..
T Consensus 119 ~~~~l~s~s~D-------g~i~vwd~~~~~~~~~l~-----~h~~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~ 180 (410)
T 1vyh_C 119 VFSVMVSASED-------ATIKVWDYETGDFERTLK-----GHTDSVQDISFDHSGKLLASCSAD------MTIKLWDFQ 180 (410)
T ss_dssp SSSEEEEEESS-------SCEEEEETTTCCCCEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SCCCEEETT
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEe-----ccCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCC
Confidence 34566666642 578889988765432111 11111122223 45677777655 356778877
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGK 185 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (329)
+.+- +.... .....-.++.. -++..++.|+.+ ..+..||+.+..-...-.. ....-..+.. .++.
T Consensus 181 ~~~~--~~~~~--~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 181 GFEC--IRTMH--GHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTFTG----HREWVRMVRPNQDGT 247 (410)
T ss_dssp SSCE--EECCC--CCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEEC----CSSCEEEEEECTTSS
T ss_pred CCce--eEEEc--CCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEeC----CCccEEEEEECCCCC
Confidence 6542 22221 01111111222 255666777754 4688899988754322211 1111112222 3466
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
+++.|+.+ ..+..||..+....
T Consensus 248 ~l~s~s~D----~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 248 LIASCSND----QTVRVWVVATKECK 269 (410)
T ss_dssp EEEEEETT----SCEEEEETTTCCEE
T ss_pred EEEEEcCC----CeEEEEECCCCcee
Confidence 77777755 46777887665543
No 100
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.62 E-value=0.25 Score=41.44 Aligned_cols=188 Identities=11% Similarity=0.014 Sum_probs=92.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||..+.+-..... .....-..+.+ ++.+++.||.+ ..+..||..
T Consensus 66 d~~~l~s~s~D-------g~v~iWd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~d------~~v~iw~~~ 127 (340)
T 1got_B 66 DSRLLLSASQD-------GKLIIWDSYTTNKVHAIP-----LRSSWVMTCAYAPSGNYVACGGLD------NICSIYNLK 127 (340)
T ss_dssp TSSEEEEEETT-------TEEEEEETTTCCEEEEEE-----CSSSCEEEEEECTTSSEEEEEETT------CEEEEEETT
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCCcceEee-----cCCccEEEEEECCCCCEEEEEeCC------CeEEEEECc
Confidence 45666666643 578889987665332221 11111122222 45566667655 467788876
Q ss_pred CCc--EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECC
Q 020245 108 TNQ--WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQG 184 (329)
Q Consensus 108 ~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~ 184 (329)
+.. ......... ....-......-+++ ++.|+.+ ..+..||+.+.+-...-.. ....-.++.. .++
T Consensus 128 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~~ 196 (340)
T 1got_B 128 TREGNVRVSRELAG-HTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTTFTG----HTGDVMSLSLAPDT 196 (340)
T ss_dssp TCSBSCEEEEEEEC-CSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTS
T ss_pred cCCCcceeEEEecC-CCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEEEcC----CCCceEEEEECCCC
Confidence 542 111111100 011111111223455 4455543 4688899988764433221 1112222333 256
Q ss_pred EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 185 KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
.+++.|+.+ ..+..||..+..-...-. . ....-.+++.. ++.+++.|+.+ ..+..+|
T Consensus 197 ~~l~sg~~d----~~v~~wd~~~~~~~~~~~--~--h~~~v~~v~~~p~~~~l~s~s~d--------------~~v~iwd 254 (340)
T 1got_B 197 RLFVSGACD----ASAKLWDVREGMCRQTFT--G--HESDINAICFFPNGNAFATGSDD--------------ATCRLFD 254 (340)
T ss_dssp SEEEEEETT----SCEEEEETTTCSEEEEEC--C--CSSCEEEEEECTTSSEEEEEETT--------------SCEEEEE
T ss_pred CEEEEEeCC----CcEEEEECCCCeeEEEEc--C--CcCCEEEEEEcCCCCEEEEEcCC--------------CcEEEEE
Confidence 677777755 577888887665433221 1 11111222222 55677777642 3578889
Q ss_pred cCCce
Q 020245 264 TETLV 268 (329)
Q Consensus 264 ~~~~~ 268 (329)
+....
T Consensus 255 ~~~~~ 259 (340)
T 1got_B 255 LRADQ 259 (340)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 87654
No 101
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.61 E-value=0.13 Score=43.30 Aligned_cols=185 Identities=9% Similarity=0.049 Sum_probs=92.9
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++++++.||.+ ..+..||..+..|........ .....-.++. .-++++++.|+.+ ..+..|+..+..
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~ 94 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDD 94 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCC
Confidence 45666777655 467788888777653322210 0111111122 2366777777765 357778888777
Q ss_pred EEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCc-eEEeeccCCCCCCcceeEEEEE--CCEEE
Q 020245 161 WIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQ-WAQVETSGEKPTARSVFSTVGI--GKHIV 236 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~-w~~~~~~~~~p~~r~~~~~~~~--~~~i~ 236 (329)
+..+..+. .....-.+++.. ++++++.|+.+ ..+..+|..+.. ...+.... ........+.+ ++.++
T Consensus 95 ~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~s~D----~~v~iwd~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 95 FECVTTLE--GHENEVKSVAWAPSGNLLATCSRD----KSVWVWEVDEEDEYECVSVLN---SHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT----SCEEEEEECTTSCEEEEEEEC---CCCSCEEEEEECSSSSCE
T ss_pred eEEEEEcc--CCCCCceEEEEeCCCCEEEEEECC----CeEEEEECCCCCCeEEEEEec---CcCCCeEEEEECCCCCEE
Confidence 66555442 111122223332 56677777755 467777775542 33332211 11111122222 45666
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCC
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSP 309 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~ 309 (329)
+.|+.+ ..+..||.++..|..+.. +...... -.+++...+ +..++.|+.+.
T Consensus 166 ~s~s~d--------------~~i~~w~~~~~~~~~~~~------~~~h~~~-v~~l~~sp~-g~~l~s~s~D~ 216 (345)
T 3fm0_A 166 ASASYD--------------DTVKLYREEEDDWVCCAT------LEGHEST-VWSLAFDPS-GQRLASCSDDR 216 (345)
T ss_dssp EEEETT--------------SCEEEEEEETTEEEEEEE------ECCCSSC-EEEEEECTT-SSEEEEEETTS
T ss_pred EEEeCC--------------CcEEEEEecCCCEEEEEE------ecCCCCc-eEEEEECCC-CCEEEEEeCCC
Confidence 666642 357788888888765443 1111111 023333333 44777777654
No 102
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.61 E-value=0.25 Score=41.31 Aligned_cols=239 Identities=10% Similarity=0.073 Sum_probs=121.1
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCCC--cEEEcccCC---CCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRTN--QWTLLSNGD---AGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~~---~~p 121 (329)
+.++++|+.+.+.........+ ..-+.++.. +++||+.... ...+.+||+... .-..+...+ ...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~---~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLF---YLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQ 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTC---SSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCST
T ss_pred CcEEEEECCCCeEEeccCCCcc---CCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCc
Confidence 4699999987776443321111 111223332 5679987532 357999998765 233332211 000
Q ss_pred CCc-ccceeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCC----CCCCC-CcEEEEE-C-CEEEEEee
Q 020245 122 PHR-SYHSTAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGEN----CKGRG-GPGLIVT-Q-GKIWVVYG 191 (329)
Q Consensus 122 ~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~----~~~~~-~~~~~~~-~-~~l~v~gG 191 (329)
... .-..++.. ++.||+..+... ..+.+|+.....-..+...... +.... -..++.. + +.+|+...
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCN----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSC----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCC----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 111 11223332 689999875221 5788998655444444322110 01111 2233333 3 78998864
Q ss_pred eCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe
Q 020245 192 FAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 192 ~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
.+ ..+.+||+++.+....... ........+++...+.++...|...-.+ .....+..+|..+.+...
T Consensus 216 ~~----~~I~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~pg~~~~~~g~~~v~~-------~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 216 EN----GRIQCFKTDTKEFVREIKH--ASFGRNVFAISYIPGFLFAVNGKPYFGD-------QEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp TT----TEEEEEETTTCCEEEEECC--TTTTTCEEEEEEETTEEEEEECCCCTTC-------SCCCCEEEEETTTCCEEE
T ss_pred CC----CEEEEEECCCCcEEEEEec--cccCCCcceeeecCCEEEEeCCCEEecc-------CCCcEEEEEEcCCCeEEE
Confidence 33 6899999986665443321 1122222233344467777776533211 123478899977665544
Q ss_pred ecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 272 WDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 272 ~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
.-. ..........++++..+ +.||+....+ +.|++|++...
T Consensus 283 ~~~------~~~~~~~~p~~ia~~~d-G~lyvad~~~------~~I~~~~~~~~ 323 (329)
T 3fvz_A 283 VFK------PVRKHFDMPHDIVASED-GTVYIGDAHT------NTVWKFTLTEK 323 (329)
T ss_dssp EEC------CSSSCCSSEEEEEECTT-SEEEEEESSS------CCEEEEEEEEC
T ss_pred EEc------CCCCccCCeeEEEECCC-CCEEEEECCC------CEEEEEeCCcc
Confidence 321 00111111134444444 5688876543 37888888654
No 103
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.61 E-value=0.24 Score=41.09 Aligned_cols=142 Identities=12% Similarity=0.127 Sum_probs=65.2
Q ss_pred CceEEEeCC-CCcEEEEeeCCCCCCCCcceeEEE-E-CCEEEEEccccCCCCCCCceEEEECC--CCcEEEcccCCCCCC
Q 020245 48 NNLHVFDLE-TLTWSVADVTGDVPPPRVGVTMAA-V-GHTIYMFGGRDGTHKELNELYSFDTR--TNQWTLLSNGDAGPP 122 (329)
Q Consensus 48 ~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~d~~--~~~W~~~~~~~~~p~ 122 (329)
+.+.+||.. +.+.+.+.... ....-..++. - ++.||+.+.. ...+..|++. +.+++.+..... +.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~-~~ 84 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD---VPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESAL-PG 84 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE---CSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEEC-SS
T ss_pred CeEEEEEECCCCcEEEeeeEe---cCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeecccccc-CC
Confidence 568888774 44454443321 1111122222 2 3356665432 1467777766 677776554421 11
Q ss_pred CcccceeEeeCCe-EEEEcccCCCcCcceeEEEEcCCC-eEEEecCCCCCCCCCCCcEEEEE-CC-EEEEEeeeCCCCcc
Q 020245 123 HRSYHSTAADDRH-VYIFGGCGVSGRLNDLWGFDVVDR-KWIQYPSAGENCKGRGGPGLIVT-QG-KIWVVYGFAGVEVD 198 (329)
Q Consensus 123 ~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~~~~-~W~~~~~~~~~~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~ 198 (329)
........-+++ +|+.+. .. ..+..||+.+. +...+.... ....-..++.. ++ .+|+.+..+ .
T Consensus 85 -~~~~~~~s~dg~~l~~~~~-~~----~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~----~ 151 (343)
T 1ri6_A 85 -SLTHISTDHQGQFVFVGSY-NA----GNVSVTRLEDGLPVGVVDVVE---GLDGCHSANISPDNRTLWVPALKQ----D 151 (343)
T ss_dssp -CCSEEEECTTSSEEEEEET-TT----TEEEEEEEETTEEEEEEEEEC---CCTTBCCCEECTTSSEEEEEEGGG----T
T ss_pred -CCcEEEEcCCCCEEEEEec-CC----CeEEEEECCCCcccccccccc---CCCCceEEEECCCCCEEEEecCCC----C
Confidence 112222223444 555543 22 45788887432 222222221 11112222332 34 466654222 5
Q ss_pred cEEEEeCCC-CceEE
Q 020245 199 DVHCFDPAH-AQWAQ 212 (329)
Q Consensus 199 ~~~~~d~~~-~~w~~ 212 (329)
.+..||..+ .+...
T Consensus 152 ~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 152 RICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEEEEECTTSCEEE
T ss_pred EEEEEEecCCCceee
Confidence 788899876 65554
No 104
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.55 E-value=0.32 Score=41.84 Aligned_cols=189 Identities=13% Similarity=0.025 Sum_probs=92.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||+.+.+-..... .....-.++.+ ++.+++.|+.+ ..+..||..
T Consensus 108 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~ 169 (420)
T 3vl1_A 108 QMRRFILGTTE-------GDIKVLDSNFNLQREIDQ-----AHVSEITKLKFFPSGEALISSSQD------MQLKIWSVK 169 (420)
T ss_dssp SSCEEEEEETT-------SCEEEECTTSCEEEEETT-----SSSSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred CCCEEEEEECC-------CCEEEEeCCCcceeeecc-----cccCccEEEEECCCCCEEEEEeCC------CeEEEEeCC
Confidence 55666666532 568889987654332211 11111222233 45566666654 468889987
Q ss_pred CCcE-EEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEE------
Q 020245 108 TNQW-TLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLI------ 180 (329)
Q Consensus 108 ~~~W-~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~------ 180 (329)
+.+- ..+... ...-......-+++.++.|+.+ ..+..||+.+.+-...-.....+.. .-.+++
T Consensus 170 ~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 239 (420)
T 3vl1_A 170 DGSNPRTLIGH----RATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHD-GVNSIALFVGTD 239 (420)
T ss_dssp TCCCCEEEECC----SSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTC-CEEEEEEEECCC
T ss_pred CCcCceEEcCC----CCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCC-CccEEEEecCCc
Confidence 6532 222111 1111111222256666777754 3588899887764433322100000 011111
Q ss_pred ----------------EECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCE-EEEEcCcc
Q 020245 181 ----------------VTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKH-IVVYGGEV 242 (329)
Q Consensus 181 ----------------~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~-i~i~GG~~ 242 (329)
..++++++.|+.+ ..+..||..+.+-...... .....-.+++.. ++. +++.|+.+
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHVS----GVITVHNVFSKEQTIQLPS---KFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEETT----SCEEEEETTTCCEEEEECC---TTSSCEEEEEECSSCTTEEEEEETT
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcCC----CeEEEEECCCCceeEEccc---ccCCCceeEEEeCCCCCEEEEEeCC
Confidence 1256677777654 4688899876653322211 111112222222 334 77777642
Q ss_pred CCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 243 DPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
..+..+|+.+.
T Consensus 313 --------------g~i~vwd~~~~ 323 (420)
T 3vl1_A 313 --------------GMLAQWDLRSP 323 (420)
T ss_dssp --------------SEEEEEETTCT
T ss_pred --------------CeEEEEEcCCC
Confidence 46888898765
No 105
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.44 E-value=0.3 Score=40.19 Aligned_cols=146 Identities=8% Similarity=-0.054 Sum_probs=73.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++.+++.|+.+ ..+..||..+..-....... ..........-++++++.|+.+ ..+..||..+.
T Consensus 24 ~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~s~d------~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYS-------GRVELWNYETQVEVRSIQVT---ETPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECC---SSCEEEEEEEGGGTEEEEEETT------SEEEEEETTTC
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCceeEEeecc---CCcEEEEEEeCCCCEEEEECCC------CEEEEEECCCC
Confidence 55666666643 57888998876543222110 1111112222244566666654 46888898876
Q ss_pred cEE-EcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--CCE
Q 020245 110 QWT-LLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--QGK 185 (329)
Q Consensus 110 ~W~-~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~ 185 (329)
+-. .+.. ....-.++. .-++.+++.|+.+ ..+..||..++.-. ..... .....-.+++.. ++.
T Consensus 88 ~~~~~~~~-----h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~-~~~~~--~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 88 EKVVDFEA-----HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWAL-EQTFE--GHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp CEEEEEEC-----CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTTEE-EEEEC--CCCSCEEEEEECTTCTT
T ss_pred cEEEEEeC-----CCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCcch-hhhhc--ccCCcEEEEEECCCCCC
Confidence 532 2211 111111222 2355677777755 46788888765211 11111 112222233333 346
Q ss_pred EEEEeeeCCCCcccEEEEeCCCC
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
+++.|+.+ ..+..||..+.
T Consensus 155 ~l~sgs~D----~~v~iwd~~~~ 173 (304)
T 2ynn_A 155 TFASGCLD----RTVKVWSLGQS 173 (304)
T ss_dssp EEEEEETT----SEEEEEETTCS
T ss_pred EEEEEeCC----CeEEEEECCCC
Confidence 77777765 46778887543
No 106
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.43 E-value=0.28 Score=39.80 Aligned_cols=176 Identities=11% Similarity=0.102 Sum_probs=91.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+++||+..... ...+.+||+....-..+... ....-..++.. ++++|+.... ...+.+||+..
T Consensus 88 ~g~l~v~~~~~------~~~i~~~d~~g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g 151 (286)
T 1q7f_A 88 SGDIIVTERSP------THQIQIYNQYGQFVRKFGAT----ILQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNG 151 (286)
T ss_dssp TTEEEEEECGG------GCEEEEECTTSCEEEEECTT----TCSCEEEEEECTTSCEEEEETT------TTEEEEECTTS
T ss_pred CCeEEEEcCCC------CCEEEEECCCCcEEEEecCc----cCCCceEEEEeCCCCEEEEECC------CCEEEEEcCCC
Confidence 56888876421 15788999654433333221 11111233332 4678886432 35789999876
Q ss_pred CcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCc-EEEE-ECCEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGP-GLIV-TQGKI 186 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~-~~~~l 186 (329)
.....+..... .......++.-++++|+..... ..+.+||+.......+.... ..... .++. .++.+
T Consensus 152 ~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~g----~~~~p~~i~~d~~G~l 220 (286)
T 1q7f_A 152 NVLHKFGCSKH--LEFPNGVVVNDKQEIFISDNRA-----HCVKVFNYEGQYLRQIGGEG----ITNYPIGVGINSNGEI 220 (286)
T ss_dssp CEEEEEECTTT--CSSEEEEEECSSSEEEEEEGGG-----TEEEEEETTCCEEEEESCTT----TSCSEEEEEECTTCCE
T ss_pred CEEEEeCCCCc--cCCcEEEEECCCCCEEEEECCC-----CEEEEEcCCCCEEEEEccCC----ccCCCcEEEECCCCCE
Confidence 65554432211 1111222223367888875422 57899998766555554321 11222 2333 35778
Q ss_pred EEEeeeCCCCcc-cEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEc
Q 020245 187 WVVYGFAGVEVD-DVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYG 239 (329)
Q Consensus 187 ~v~gG~~~~~~~-~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~G 239 (329)
|+....+ + .+.+||.....-..+.... +.. ...+++.. ++++|+..
T Consensus 221 ~v~~~~~----~~~i~~~~~~g~~~~~~~~~~--~~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 221 LIADNHN----NFNLTIFTQDGQLISALESKV--KHA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEECSS----SCEEEEECTTSCEEEEEEESS--CCS-CEEEEEEETTTEEEEEE
T ss_pred EEEeCCC----CEEEEEECCCCCEEEEEcccC--CCC-cceeEEECCCCcEEEEC
Confidence 8876432 3 7899997655444444321 111 12233333 66888874
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.41 E-value=0.097 Score=45.12 Aligned_cols=110 Identities=16% Similarity=0.139 Sum_probs=57.6
Q ss_pred EEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEE
Q 020245 84 TIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI 162 (329)
Q Consensus 84 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~ 162 (329)
.+++.|+.+ ..+..||..+.+....-... .....-.++.. -++.+++.|+.+ ..+..||+.+.+-.
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGAAVLTLGPD--VHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVV 211 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTEEEEEECTT--TCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEE
T ss_pred CEEEEEcCC------CEEEEEECCCCCccEEEecC--CCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCcee
Confidence 466666654 46889999887644322100 11111122222 256677777654 46899999987654
Q ss_pred Eec-CCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 163 QYP-SAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 163 ~~~-~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
... ... ........+...++++++.| +....-..+..||..+..
T Consensus 212 ~~~~~~~--~~~~~~~~~~~~~~~~l~~g-~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 212 AEKDRPH--EGTRPVHAVFVSEGKILTTG-FSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEECSS--CSSSCCEEEECSTTEEEEEE-ECTTCCEEEEEEETTBCS
T ss_pred eeeccCC--CCCcceEEEEcCCCcEEEEe-ccCCCCceEEEEcCcccc
Confidence 433 221 11112222233456666665 211122678888886643
No 108
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.36 E-value=0.38 Score=40.55 Aligned_cols=29 Identities=21% Similarity=0.391 Sum_probs=17.5
Q ss_pred CCE-EEEEeeeCCCCcccEEEEeCCCCceEEeec
Q 020245 183 QGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQVET 215 (329)
Q Consensus 183 ~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~ 215 (329)
+++ +|+....+ ..+..|+..+.+.+.+..
T Consensus 221 dg~~l~v~~~~~----~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 221 DGKFAYLINEIG----GTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp TSSEEEEEETTT----CEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEcCCC----CeEEEEEecCCceEEeEE
Confidence 454 66654222 568888887777655543
No 109
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.32 E-value=0.021 Score=48.65 Aligned_cols=150 Identities=9% Similarity=0.025 Sum_probs=70.5
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||+.+..|+.+.... .....-..+.+ ++++++.|+.+ ..+..||..
T Consensus 22 ~g~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~ 85 (377)
T 3dwl_C 22 QRTEFVTTTAT-------NQVELYEQDGNGWKHARTFS---DHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKR 85 (377)
T ss_dssp SSSEEECCCSS-------SCBCEEEEETTEEEECCCBC---CCSSCEEEEEECTTTCCEEEEETT------SSEEEC---
T ss_pred CCCEEEEecCC-------CEEEEEEccCCceEEEEEEe---cCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcC
Confidence 56666767642 56888888888776655532 22222223333 35666666654 468888887
Q ss_pred CCc-EEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe-EEEecCCCCCCCCCCCcEEEEE-C
Q 020245 108 TNQ-WTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK-WIQYPSAGENCKGRGGPGLIVT-Q 183 (329)
Q Consensus 108 ~~~-W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~-W~~~~~~~~~~~~~~~~~~~~~-~ 183 (329)
+.. |....... .....-.++.. -++++++.|+.+ ..+..||..+.+ |..+..... +....-.+++.. +
T Consensus 86 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 86 PDGTWKQTLVLL--RLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPN 157 (377)
T ss_dssp ---CCCCEEECC--CCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECS-SCCSCEEEEEECTT
T ss_pred CCCceeeeeEec--ccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCC
Confidence 765 43333321 11111111222 256666777654 357777777654 222222210 012222233333 4
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCC
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
+++++.|+.+ ..+..||...
T Consensus 158 ~~~l~~~~~d----~~i~iwd~~~ 177 (377)
T 3dwl_C 158 NVLLAAGCAD----RKAYVLSAYV 177 (377)
T ss_dssp SSEEEEEESS----SCEEEEEECC
T ss_pred CCEEEEEeCC----CEEEEEEEEe
Confidence 6677777755 4677777643
No 110
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.39 Score=41.16 Aligned_cols=239 Identities=12% Similarity=0.044 Sum_probs=110.2
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCC--cEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETL--TWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
++++++.|+.+ ..+..||..+. ....+..... ....-.++... ++.+++.|+.+ ..+..||
T Consensus 78 ~~~~l~~~~~d-------g~v~vw~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d------g~v~iwd 142 (416)
T 2pm9_A 78 NNKIIAGALDN-------GSLELYSTNEANNAINSMARFSN--HSSSVKTVKFNAKQDNVLASGGNN------GEIFIWD 142 (416)
T ss_dssp SSSCEEEEESS-------SCEEEECCSSTTSCCCEEEECCC--SSSCCCEEEECSSSTTBEEEECSS------SCEEBCB
T ss_pred CCCeEEEEccC-------CeEEEeecccccccccchhhccC--CccceEEEEEcCCCCCEEEEEcCC------CeEEEEE
Confidence 45566666532 56888888761 1212222110 11111222222 25666766654 4578888
Q ss_pred CCCCc------EE-EcccCCCCCCCcccceeEee-C-CeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCC--CC
Q 020245 106 TRTNQ------WT-LLSNGDAGPPHRSYHSTAAD-D-RHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCK--GR 174 (329)
Q Consensus 106 ~~~~~------W~-~~~~~~~~p~~r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~--~~ 174 (329)
..+.+ -. .+.... .....-.++... + +.+++.|+.+ ..+..||+.+.+-........... ..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSM--SSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQ 215 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSC--CSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCC
T ss_pred CCCCcccccccccccccccc--CCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCC
Confidence 87654 11 111010 111111222222 3 5777777754 458999999876544443311000 12
Q ss_pred CCcEEEEEC-C-EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCC--CCcceeEEEEE--CCEEEEEcCccCCCCCC
Q 020245 175 GGPGLIVTQ-G-KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKP--TARSVFSTVGI--GKHIVVYGGEVDPSDLG 248 (329)
Q Consensus 175 ~~~~~~~~~-~-~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p--~~r~~~~~~~~--~~~i~i~GG~~~~~~~~ 248 (329)
.-.+++... + .+++.++.++ ....+..||..+..-. +. .+. ....-.++... ++.+++.|+.+
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~-~~~~i~~~d~~~~~~~-~~---~~~~~~~~~v~~~~~s~~~~~~l~s~~~d------ 284 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSD-NDPSILIWDLRNANTP-LQ---TLNQGHQKGILSLDWCHQDEHLLLSSGRD------ 284 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCS-SSCCCCEEETTSTTSC-SB---CCCSCCSSCEEEEEECSSCSSCEEEEESS------
T ss_pred ceEEEEECCCCCCEEEEEECCC-CCceEEEEeCCCCCCC-cE---EeecCccCceeEEEeCCCCCCeEEEEeCC------
Confidence 222233332 2 4666666432 1126778888664211 11 111 11112222222 55777777642
Q ss_pred cCCCCeeeceeEEEEcCCceeE-eecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 249 HLGAGKFAGELYSLDTETLVWT-RWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 249 ~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
..+..||+++.+-. .+.. ..... .+++...+.+.+++.|+.+. .|.+|++++.
T Consensus 285 --------g~v~~wd~~~~~~~~~~~~-------~~~~v---~~~~~s~~~~~~l~s~~~d~------~i~iw~~~~~ 338 (416)
T 2pm9_A 285 --------NTVLLWNPESAEQLSQFPA-------RGNWC---FKTKFAPEAPDLFACASFDN------KIEVQTLQNL 338 (416)
T ss_dssp --------SEEEEECSSSCCEEEEEEC-------SSSCC---CCEEECTTCTTEEEECCSSS------EEEEEESCCC
T ss_pred --------CCEEEeeCCCCccceeecC-------CCCce---EEEEECCCCCCEEEEEecCC------cEEEEEccCC
Confidence 36888888765432 2221 11111 22233332125888888653 4666766543
No 111
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.22 E-value=0.36 Score=38.83 Aligned_cols=149 Identities=9% Similarity=0.025 Sum_probs=81.8
Q ss_pred CCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCC-CeEEEecCCCCCCCCC
Q 020245 96 KELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVD-RKWIQYPSAGENCKGR 174 (329)
Q Consensus 96 ~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~~~~~ 174 (329)
.....++.+|+.+++...+.... . ........-+++.+++++. ..++.+|+.+ .+...+.... ....
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~---~-~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~--~~~~ 86 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTP---E-LFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGF--ATIC 86 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEES---S-CCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTT--CCCB
T ss_pred CcceeEEEEeCCCCceeeeccCC---c-ceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEecccc--cccc
Confidence 34567899999988766554331 1 1122222335666666542 4799999998 7766655432 1122
Q ss_pred CCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CC-EEEEEcCccCCCCCCcCCC
Q 020245 175 GGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GK-HIVVYGGEVDPSDLGHLGA 252 (329)
Q Consensus 175 ~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~-~i~i~GG~~~~~~~~~~~~ 252 (329)
.......-+++.++++.........++.++..+...+.+... .. ...+... ++ .|++.+....
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~--~~~~~~spdg~~l~~~~~~~~--------- 151 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN----LP--SYWHGWSPDGKSFTYCGIRDQ--------- 151 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS----SS--EEEEEECTTSSEEEEEEEETT---------
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC----CC--ccceEECCCCCEEEEEECCCC---------
Confidence 222223345666666654333457899999877766555421 11 2222222 34 4554554321
Q ss_pred CeeeceeEEEEcCCceeEeecC
Q 020245 253 GKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 253 ~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
...+|.+|..+.....+..
T Consensus 152 ---~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 152 ---VFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp ---EEEEEEEETTTCCEEECCC
T ss_pred ---ceEEEEEECCCCcceEccc
Confidence 2368888887776665553
No 112
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.20 E-value=0.4 Score=39.19 Aligned_cols=195 Identities=12% Similarity=0.057 Sum_probs=99.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeC-CCCCCCCcceeEEEECCEEEEE----ccccC-------CCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVT-GDVPPPRVGVTMAAVGHTIYMF----GGRDG-------THKE 97 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~-~~~p~~r~~~~~~~~~~~iyv~----GG~~~-------~~~~ 97 (329)
++++|+.... ...+.+||+.+.+.+.+... ...+..+....++.-++++|+. |.... ....
T Consensus 79 dg~l~v~~~~-------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~ 151 (296)
T 3e5z_A 79 QGHLIACSHG-------LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELP 151 (296)
T ss_dssp TCCEEEEETT-------TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSS
T ss_pred CCcEEEEecC-------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCC
Confidence 5677765431 15799999988887665432 1111112222333335678886 43110 1112
Q ss_pred CCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcC-CCeE-EEecCCCCCCCCCC
Q 020245 98 LNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVV-DRKW-IQYPSAGENCKGRG 175 (329)
Q Consensus 98 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~-~~~W-~~~~~~~~~~~~~~ 175 (329)
...++++|+. .+...+.... ......+..-++++++... .. ..+++|++. +++. ...... .......
T Consensus 152 ~~~l~~~~~~-g~~~~~~~~~----~~~~gi~~s~dg~~lv~~~-~~----~~i~~~~~~~~g~~~~~~~~~-~~~~~~p 220 (296)
T 3e5z_A 152 GRWVFRLAPD-GTLSAPIRDR----VKPNGLAFLPSGNLLVSDT-GD----NATHRYCLNARGETEYQGVHF-TVEPGKT 220 (296)
T ss_dssp SCEEEEECTT-SCEEEEECCC----SSEEEEEECTTSCEEEEET-TT----TEEEEEEECSSSCEEEEEEEE-CCSSSCC
T ss_pred CcEEEEECCC-CCEEEeecCC----CCCccEEECCCCCEEEEeC-CC----CeEEEEEECCCCcCcCCCeEe-eCCCCCC
Confidence 3579999987 5555543321 1112222233566664432 22 578899886 4555 211111 0011111
Q ss_pred CcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--C-CEEEEEcCccCCCCCCcCCC
Q 020245 176 GPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--G-KHIVVYGGEVDPSDLGHLGA 252 (329)
Q Consensus 176 ~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~-~~i~i~GG~~~~~~~~~~~~ 252 (329)
...+.-.++.+|+..+ ..+.+||++......+.. |.. ..+++.- + +.||+...
T Consensus 221 ~~i~~d~~G~l~v~~~------~~v~~~~~~g~~~~~~~~----~~~--~~~~~f~~~d~~~L~v~t~------------ 276 (296)
T 3e5z_A 221 DGLRVDAGGLIWASAG------DGVHVLTPDGDELGRVLT----PQT--TSNLCFGGPEGRTLYMTVS------------ 276 (296)
T ss_dssp CSEEEBTTSCEEEEET------TEEEEECTTSCEEEEEEC----SSC--CCEEEEESTTSCEEEEEET------------
T ss_pred CeEEECCCCCEEEEcC------CeEEEECCCCCEEEEEEC----CCC--ceeEEEECCCCCEEEEEcC------------
Confidence 2222334678888762 589999997555554442 222 1222221 2 25666542
Q ss_pred CeeeceeEEEEcCCceeE
Q 020245 253 GKFAGELYSLDTETLVWT 270 (329)
Q Consensus 253 ~~~~~~~~~~d~~~~~W~ 270 (329)
..++++++++++-+
T Consensus 277 ----~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 277 ----TEFWSIETNVRGLE 290 (296)
T ss_dssp ----TEEEEEECSCCBCC
T ss_pred ----CeEEEEEccccccc
Confidence 47999999877543
No 113
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.20 E-value=0.42 Score=39.46 Aligned_cols=143 Identities=16% Similarity=0.139 Sum_probs=72.0
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCC--CcceeEEEEC-CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCC--
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPP--RVGVTMAAVG-HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPP-- 122 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~--r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~-- 122 (329)
+.+..+|+.+.+........ .. +.......-+ +.+|+.+.. ...+..+|+.+.+-...-..+. +.
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~-~~~~ 80 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIA---DAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLST-PEER 80 (337)
T ss_dssp TEEEEEETTTTEEEEEEECT---TCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCB-TTEE
T ss_pred CeEEEEECCCCcEEEEEEcC---CCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCC-cccc
Confidence 67999999877654332211 11 1112222223 367776542 2579999998876543222210 00
Q ss_pred C-cccceeEeeCC-eEEEEccc---CCCc---CcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCE-EEEEeee
Q 020245 123 H-RSYHSTAADDR-HVYIFGGC---GVSG---RLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGK-IWVVYGF 192 (329)
Q Consensus 123 ~-r~~~~~~~~~~-~i~v~GG~---~~~~---~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~-l~v~gG~ 192 (329)
. ........-++ .+|+.... .... ....+..||+.+.+.......+ . ....++. -+++ +|+..
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---~--~~~~~~~s~dg~~l~~~~-- 153 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---R--QITMLAWARDGSKLYGLG-- 153 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC---S--SCCCEEECTTSSCEEEES--
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC---C--CcceeEECCCCCEEEEeC--
Confidence 0 11112222244 66666321 0011 1267999999988765443332 1 1122233 3444 65552
Q ss_pred CCCCcccEEEEeCCCCceEE
Q 020245 193 AGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 193 ~~~~~~~~~~~d~~~~~w~~ 212 (329)
..++.+|+.+.+-..
T Consensus 154 -----~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 154 -----RDLHVMDPEAGTLVE 168 (337)
T ss_dssp -----SSEEEEETTTTEEEE
T ss_pred -----CeEEEEECCCCcEee
Confidence 579999998776543
No 114
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.20 E-value=0.44 Score=39.63 Aligned_cols=236 Identities=11% Similarity=-0.028 Sum_probs=118.1
Q ss_pred CceEEEeCCCCcEEEEeeCCCCC---------------CCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVP---------------PPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQ 110 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p---------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 110 (329)
..+++||+.+.+++.+....... ....-+.++.. +++|||.... ..+.++|+.+..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~ 112 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-------YHLSVVGSEGGH 112 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------TEEEEECTTCEE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-------CCEEEEeCCCCE
Confidence 67999999887776654321000 00012344444 5789987321 348889988766
Q ss_pred EEEcccCCC-CCCCcccceeEee-CCeEEEEcccCC------------CcCcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 111 WTLLSNGDA-GPPHRSYHSTAAD-DRHVYIFGGCGV------------SGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 111 W~~~~~~~~-~p~~r~~~~~~~~-~~~i~v~GG~~~------------~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
.+.+..... .+..+.....+.- +++||+.-.... ......+++||+.+.+...+.... ...
T Consensus 113 ~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-----~~p 187 (322)
T 2fp8_A 113 ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL-----HVP 187 (322)
T ss_dssp CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE-----SCC
T ss_pred EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC-----ccC
Confidence 555432210 0111222233333 678888632210 012357999999888765543221 111
Q ss_pred cEEEEE-CC-EEEEEeeeCCCCcccEEEEeCCCC---ceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcC
Q 020245 177 PGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPAHA---QWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHL 250 (329)
Q Consensus 177 ~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~~~---~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~ 250 (329)
..++.. ++ .+|+.-.. ...+++|++... +.+.+.. ++. ...++.- ++.||+.........
T Consensus 188 ~gia~~~dg~~lyv~d~~----~~~I~~~~~~~~~~~~~~~~~~---~~g---P~gi~~d~~G~l~va~~~~~~~~---- 253 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFL----SHQIVKYWLEGPKKGTAEVLVK---IPN---PGNIKRNADGHFWVSSSEELDGN---- 253 (322)
T ss_dssp CEEEECTTSSEEEEEEGG----GTEEEEEESSSTTTTCEEEEEE---CSS---EEEEEECTTSCEEEEEEEETTSS----
T ss_pred cceEECCCCCEEEEEeCC----CCeEEEEECCCCcCCccceEEe---CCC---CCCeEECCCCCEEEEecCccccc----
Confidence 223333 33 47876432 268999998652 3444332 222 2233322 457888754211000
Q ss_pred CCCeeeceeEEEEcCCceeEeecCCCCCCCCCCC--CCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 251 GAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGP--RGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 251 ~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~--r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
........+.+||++...-..+.. |.. ... .+.+...+ +.|||..-. .+.|.+|+++.+
T Consensus 254 ~~~~~~~~v~~~d~~G~~~~~~~~-------~~g~~~~~--~~~~~~~~-g~L~v~~~~------~~~i~~~~~~~~ 314 (322)
T 2fp8_A 254 MHGRVDPKGIKFDEFGNILEVIPL-------PPPFAGEH--FEQIQEHD-GLLYIGTLF------HGSVGILVYDKK 314 (322)
T ss_dssp TTSCEEEEEEEECTTSCEEEEEEC-------CTTTTTSC--CCEEEEET-TEEEEECSS------CSEEEEEEC---
T ss_pred ccCCCccEEEEECCCCCEEEEEEC-------CCCCcccc--ceEEEEeC-CEEEEeecC------CCceEEEecccc
Confidence 000113568999998776666664 221 111 22222233 558876543 246788887643
No 115
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.15 E-value=0.87 Score=42.60 Aligned_cols=215 Identities=11% Similarity=0.033 Sum_probs=107.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCC----------CCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGT----------HKEL 98 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----------~~~~ 98 (329)
+++.++++....... ...++++|+.+.+........ ... ...+-. +++.++++..... ....
T Consensus 135 Dg~~la~~~~~~G~~--~~~i~v~d~~tg~~~~~~~~~----~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 135 DGEYFAYGLSASGSD--WVTIKFMKVDGAKELPDVLER----VKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp TSSEEEEEEEETTCS--CEEEEEEETTTTEEEEEEEEE----ECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred CCCEEEEEEcCCCCc--eEEEEEEECCCCCCCcccccC----ccc-ceEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 555555543222111 137999999998876543211 111 112222 4443333333211 1234
Q ss_pred CceEEEECCCCcEE--EcccCCCCCCCccc-ceeEeeCCeEEEEcccCCCcCcceeEEEEcCC------C--eEEEecCC
Q 020245 99 NELYSFDTRTNQWT--LLSNGDAGPPHRSY-HSTAADDRHVYIFGGCGVSGRLNDLWGFDVVD------R--KWIQYPSA 167 (329)
Q Consensus 99 ~~~~~~d~~~~~W~--~~~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~------~--~W~~~~~~ 167 (329)
..++.++..+.+-. .+-... ..+... .....-+++.+++...........++.+|..+ . .+..+...
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFP--DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCT--TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CEEEEEECCCCcccceEEeccC--CCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 56899998876532 221111 112211 22223355544444332222246889999876 4 57777654
Q ss_pred CCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCC---ceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccC
Q 020245 168 GENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHA---QWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVD 243 (329)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~---~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~ 243 (329)
. .. ........++.+|+.... +.....++.+|..+. .|+.+.... .......+... ++.+++......
T Consensus 286 ~---~~-~~~~~s~dg~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 286 F---EG-EYDYVTNEGTVFTFKTNR-HSPNYRLINIDFTDPEESKWKVLVPEH---EKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp S---SS-CEEEEEEETTEEEEEECT-TCTTCEEEEEETTSCCGGGCEEEECCC---SSCEEEEEEEETTTEEEEEEEETT
T ss_pred C---Cc-EEEEEeccCCEEEEEECC-CCCCCEEEEEeCCCCCcccceeccCCC---CCCeEEEEEEEcCCEEEEEEEECC
Confidence 2 11 112222345667777543 223467999998765 588876421 11122233444 667776654321
Q ss_pred CCCCCcCCCCeeeceeEEEEcCCc-eeEeec
Q 020245 244 PSDLGHLGAGKFAGELYSLDTETL-VWTRWD 273 (329)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~ 273 (329)
...++++|+.+. ....+.
T Consensus 358 ------------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 358 ------------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp ------------EEEEEEEETTTCCEEEEEC
T ss_pred ------------EEEEEEEECCCCCEEEecC
Confidence 357899998544 355555
No 116
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.14 E-value=0.61 Score=40.78 Aligned_cols=145 Identities=11% Similarity=0.094 Sum_probs=76.7
Q ss_pred eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 132 DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 132 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
.++.+++.|+.+ ..+..||+.+.+-...-.. ....-.+++. .++..++.|+.+ ..+..||..+.+-
T Consensus 278 ~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~sg~~d----g~i~vwd~~~~~~ 344 (464)
T 3v7d_B 278 GHGNIVVSGSYD-----NTLIVWDVAQMKCLYILSG----HTDRIYSTIYDHERKRCISASMD----TTIRIWDLENGEL 344 (464)
T ss_dssp EETTEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEEETTTTEEEEEETT----SCEEEEETTTTEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEecC----CCCCEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCcE
Confidence 345666666654 4688999988764433222 1222223333 345667777654 4788899876643
Q ss_pred EEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCccee
Q 020245 211 AQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAF 290 (329)
Q Consensus 211 ~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~ 290 (329)
...-. .......++.+++..++.|+.+ ..+..+|+.+..-..... ...... .
T Consensus 345 ~~~~~-----~h~~~v~~~~~~~~~l~s~s~d--------------g~v~vwd~~~~~~~~~~~-------~~~~~~--~ 396 (464)
T 3v7d_B 345 MYTLQ-----GHTALVGLLRLSDKFLVSAAAD--------------GSIRGWDANDYSRKFSYH-------HTNLSA--I 396 (464)
T ss_dssp EEEEC-----CCSSCEEEEEECSSEEEEEETT--------------SEEEEEETTTCCEEEEEE-------CTTCCC--E
T ss_pred EEEEe-----CCCCcEEEEEEcCCEEEEEeCC--------------CcEEEEECCCCceeeeec-------CCCCcc--E
Confidence 32221 1122223445566677777642 368888887654222211 111111 2
Q ss_pred cccccCCcceEEEEcCCCCCCCcccceEEEecccCC
Q 020245 291 AGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDG 326 (329)
Q Consensus 291 ~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~ 326 (329)
.+...+ +.+++.|+ + ..|.+||+++.+
T Consensus 397 ~~~~~~--~~~l~~~~-d------g~i~iwd~~~g~ 423 (464)
T 3v7d_B 397 TTFYVS--DNILVSGS-E------NQFNIYNLRSGK 423 (464)
T ss_dssp EEEEEC--SSEEEEEE-T------TEEEEEETTTCC
T ss_pred EEEEeC--CCEEEEec-C------CeEEEEECCCCc
Confidence 233334 34777776 2 257788876654
No 117
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.14 E-value=0.58 Score=40.46 Aligned_cols=67 Identities=9% Similarity=0.036 Sum_probs=36.0
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++..++.|+.+ ..+..||..+..-...-.. ....-.......++.+++.|+.+ ..+..||..+.+.
T Consensus 203 ~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRD------KTIKMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEeC---CCccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCce
Confidence 44566666655 4688899887653221111 01111111122356777777755 3577788877654
Q ss_pred E
Q 020245 162 I 162 (329)
Q Consensus 162 ~ 162 (329)
.
T Consensus 269 ~ 269 (410)
T 1vyh_C 269 K 269 (410)
T ss_dssp E
T ss_pred e
Confidence 3
No 118
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.13 E-value=0.32 Score=44.95 Aligned_cols=241 Identities=13% Similarity=0.016 Sum_probs=118.2
Q ss_pred CceEEEeCC--C-CcEEEEeeCCCC-CCCCcceeEEEECC-EEEEEccccC----CCCCCCceEEEECCC------CcEE
Q 020245 48 NNLHVFDLE--T-LTWSVADVTGDV-PPPRVGVTMAAVGH-TIYMFGGRDG----THKELNELYSFDTRT------NQWT 112 (329)
Q Consensus 48 ~~~~~~d~~--~-~~W~~~~~~~~~-p~~r~~~~~~~~~~-~iyv~GG~~~----~~~~~~~~~~~d~~~------~~W~ 112 (329)
..++.++.. . ...+.+...... ...+.......-++ .|+... ... .......++.+|..+ ...+
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMA-EEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEE-EEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEE-ecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 578999886 3 555554431100 01111111222244 444433 220 112335799999988 6666
Q ss_pred Ecc-cCCCCCCCcccceeEeeCCeEEEEcccCCCc---CcceeEEEEcC-CC---eEEEecCCCCCCCCCCCcEEEE-EC
Q 020245 113 LLS-NGDAGPPHRSYHSTAADDRHVYIFGGCGVSG---RLNDLWGFDVV-DR---KWIQYPSAGENCKGRGGPGLIV-TQ 183 (329)
Q Consensus 113 ~~~-~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~---~~~~~~~~~~~-~~---~W~~~~~~~~~~~~~~~~~~~~-~~ 183 (329)
.+. .. + .........-+++.+++....... ....++.+|.. +. +...+... .......... -+
T Consensus 181 ~l~~~~---~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~----~~~~~~~~~~spd 252 (662)
T 3azo_A 181 ELSDDA---H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG----PEEAIAQAEWAPD 252 (662)
T ss_dssp ESSCSC---S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE----TTBCEEEEEECTT
T ss_pred EEEecC---C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC----CCceEcceEECCC
Confidence 654 22 1 111222223355544544433221 23579999998 56 44444432 1111222222 36
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCC-CCcc---eeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeece
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKP-TARS---VFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGE 258 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p-~~r~---~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~ 258 (329)
+++|+.+..++ ...++.+|.++.+++.+....... .+.. ....+.. ++++++.+.. . ...
T Consensus 253 g~l~~~~~~~~--~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~------------~~~ 317 (662)
T 3azo_A 253 GSLIVATDRTG--WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G------------AAV 317 (662)
T ss_dssp SCEEEEECTTS--SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S------------SCE
T ss_pred CeEEEEECCCC--CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C------------ccE
Confidence 77776654332 348999999888888775421000 0000 1112222 5677666543 1 357
Q ss_pred eEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccCC
Q 020245 259 LYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLDG 326 (329)
Q Consensus 259 ~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~~ 326 (329)
+|.+|+++...+.+.. +.. .. ......++ +.+++..+.. .....+|++|+++.+
T Consensus 318 l~~~d~~~~~~~~l~~-------~~~-~~--~~~~s~~~-~~~~~~~~~~---~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 318 LGILDPESGELVDAAG-------PWT-EW--AATLTVSG-TRAVGVAASP---RTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEETTTTEEEECCS-------SCC-EE--EEEEEEET-TEEEEEEEET---TEEEEEEEEETTTCC
T ss_pred EEEEECCCCcEEEecC-------CCC-eE--EEEEecCC-CEEEEEEcCC---CCCCEEEEEECCCCc
Confidence 8999998887777754 211 11 12202334 3354444321 234578888876554
No 119
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.12 E-value=0.24 Score=43.28 Aligned_cols=149 Identities=5% Similarity=-0.057 Sum_probs=70.2
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
+.+++.|+.+ ..+.+||..+.....+..... ......++.. -++.+++.|+.+ ..+..+|....
T Consensus 177 ~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~ 241 (435)
T 4e54_B 177 TNQFYASSME-------GTTRLQDFKGNILRVFASSDT--INIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGK 241 (435)
T ss_dssp TTEEEEECSS-------SCEEEEETTSCEEEEEECCSS--CSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSC
T ss_pred CCEEEEEeCC-------CEEEEeeccCCceeEEeccCC--CCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcc
Confidence 4455555532 567788887766554443221 1111122222 255677777655 46888887654
Q ss_pred cEEEcccCCCCCCCcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEE
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKI 186 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l 186 (329)
.-..+... ...-.++.. .+..+++.|+.+ ..+..||+.+.+-....... ......-.+++. -++..
T Consensus 242 ~~~~~~~h-----~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 242 ELWNLRMH-----KKKVTHVALNPCCDWFLATASVD-----QTVKIWDLRQVRGKASFLYS-LPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp BCCCSBCC-----SSCEEEEEECTTCSSEEEEEETT-----SBCCEEETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSE
T ss_pred eeEEEecc-----cceEEeeeecCCCceEEEEecCc-----ceeeEEecccccccceEEEe-eeccccccceeECCCCCe
Confidence 32211111 111111121 134567777654 34677887764311110000 001111111111 24667
Q ss_pred EEEeeeCCCCcccEEEEeCCCCc
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
++.|+.+ ..+..||..+..
T Consensus 311 l~s~~~D----~~i~iwd~~~~~ 329 (435)
T 4e54_B 311 LLTTDQK----SEIRVYSASQWD 329 (435)
T ss_dssp EEEEESS----SCEEEEESSSSS
T ss_pred eEEEcCC----CEEEEEECCCCc
Confidence 7777755 467788876543
No 120
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.12 E-value=0.5 Score=39.51 Aligned_cols=141 Identities=9% Similarity=0.022 Sum_probs=71.7
Q ss_pred CceEEEeCCCCcE-EEEeeCCCCCC-CCcceeEEEEC----CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCC
Q 020245 48 NNLHVFDLETLTW-SVADVTGDVPP-PRVGVTMAAVG----HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W-~~~~~~~~~p~-~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p 121 (329)
+.+..||..+.+. ..+........ ..........+ +.+++.|+.+ ..+..||..+.+-...-..
T Consensus 44 ~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~---- 113 (366)
T 3k26_A 44 NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR------GIIRIINPITMQCIKHYVG---- 113 (366)
T ss_dssp TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT------CEEEEECTTTCCEEEEEES----
T ss_pred CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC------CEEEEEEchhceEeeeecC----
Confidence 4688888875543 33433221111 11222222233 4677777655 4788899887653222111
Q ss_pred CCcccceeEe-e-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcc
Q 020245 122 PHRSYHSTAA-D-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVD 198 (329)
Q Consensus 122 ~~r~~~~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~ 198 (329)
....-.++.. - ++.+++.|+.+ ..+..||+.+.+-...-.... .....-.++.. .++..++.++.+ .
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----g 183 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVE-GHRDEVLSADYDLLGEKIMSCGMD----H 183 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEEECSTT-SCSSCEEEEEECTTSSEEEEEETT----S
T ss_pred CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEEecccc-cccCceeEEEECCCCCEEEEecCC----C
Confidence 1111112222 2 56777777764 468999998876544431100 11222222333 245667777654 4
Q ss_pred cEEEEeCCCC
Q 020245 199 DVHCFDPAHA 208 (329)
Q Consensus 199 ~~~~~d~~~~ 208 (329)
.+..||..+.
T Consensus 184 ~i~i~d~~~~ 193 (366)
T 3k26_A 184 SLKLWRINSK 193 (366)
T ss_dssp CEEEEESCSH
T ss_pred CEEEEECCCC
Confidence 7788887654
No 121
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.10 E-value=0.67 Score=43.84 Aligned_cols=186 Identities=15% Similarity=0.076 Sum_probs=91.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++..++.|+. ...+..||..+.+....... .. ..-..+.+ ++..++.|+.+ ..+..||..
T Consensus 66 ~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~----~~-~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~ 127 (814)
T 3mkq_A 66 RKNWIIVGSD-------DFRIRVFNYNTGEKVVDFEA----HP-DYIRSIAVHPTKPYVLSGSDD------LTVKLWNWE 127 (814)
T ss_dssp GGTEEEEEET-------TSEEEEEETTTCCEEEEEEC----CS-SCEEEEEECSSSSEEEEEETT------SEEEEEEGG
T ss_pred CCCEEEEEeC-------CCeEEEEECCCCcEEEEEec----CC-CCEEEEEEeCCCCEEEEEcCC------CEEEEEECC
Confidence 4455555553 25788999887765432221 11 11222222 34455555543 468888887
Q ss_pred CC-cEEEcccCCCCCCCcccceeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--
Q 020245 108 TN-QWTLLSNGDAGPPHRSYHSTAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-- 182 (329)
Q Consensus 108 ~~-~W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-- 182 (329)
++ .....-.. ....-.++... ++.+++.|+.+ ..+..||+.+.+-....... .......+...
T Consensus 128 ~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~---~~~~v~~~~~~~~ 195 (814)
T 3mkq_A 128 NNWALEQTFEG----HEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLTTG---QERGVNYVDYYPL 195 (814)
T ss_dssp GTSEEEEEEEC----CSSCEEEEEEETTEEEEEEEEETT-----SEEEEEETTCSSCSEEEECC---CTTCCCEEEECCS
T ss_pred CCceEEEEEcC----CCCcEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeEEecC---CCCCEEEEEEEEC
Confidence 65 22222111 11111222222 45677777754 46888888765422221111 11222233332
Q ss_pred -CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeecee
Q 020245 183 -QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGEL 259 (329)
Q Consensus 183 -~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 259 (329)
++..++.|+.+ ..+..||..+.+-...-. ........+.+ ++.+++.|+.+ ..+
T Consensus 196 ~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d--------------g~v 252 (814)
T 3mkq_A 196 PDKPYMITASDD----LTIKIWDYQTKSCVATLE-----GHMSNVSFAVFHPTLPIIISGSED--------------GTL 252 (814)
T ss_dssp TTCCEEEEECTT----SEEEEEETTTTEEEEEEE-----CCSSCEEEEEECSSSSEEEEEETT--------------SCE
T ss_pred CCCCEEEEEeCC----CEEEEEECCCCcEEEEEc-----CCCCCEEEEEEcCCCCEEEEEeCC--------------CeE
Confidence 56677777654 478888887655332221 11111122222 44666666642 357
Q ss_pred EEEEcCCce
Q 020245 260 YSLDTETLV 268 (329)
Q Consensus 260 ~~~d~~~~~ 268 (329)
..+|+.+..
T Consensus 253 ~vwd~~~~~ 261 (814)
T 3mkq_A 253 KIWNSSTYK 261 (814)
T ss_dssp EEEETTTCS
T ss_pred EEEECCCCc
Confidence 788877644
No 122
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.09 E-value=0.65 Score=40.61 Aligned_cols=149 Identities=16% Similarity=0.167 Sum_probs=81.3
Q ss_pred ECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 81 VGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 81 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
.++.+++.|+.+ ..+..||..+.+-...-.. ....-.......++..++.|+.+ ..+..||+.+.+
T Consensus 278 ~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~ 343 (464)
T 3v7d_B 278 GHGNIVVSGSYD------NTLIVWDVAQMKCLYILSG---HTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGE 343 (464)
T ss_dssp EETTEEEEEETT------SCEEEEETTTTEEEEEECC---CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTE
T ss_pred CCCCEEEEEeCC------CeEEEEECCCCcEEEEecC---CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Confidence 344555666544 4688999887653322111 11111222222356677777754 468899998876
Q ss_pred EEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcC
Q 020245 161 WIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGG 240 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG 240 (329)
-...-.. .......+...+..++.|+.+ ..+..||..+..-...... .......+...++.+++.|+
T Consensus 344 ~~~~~~~-----h~~~v~~~~~~~~~l~s~s~d----g~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 344 LMYTLQG-----HTALVGLLRLSDKFLVSAAAD----GSIRGWDANDYSRKFSYHH----TNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECC-----CSSCEEEEEECSSEEEEEETT----SEEEEEETTTCCEEEEEEC----TTCCCEEEEEECSSEEEEEE
T ss_pred EEEEEeC-----CCCcEEEEEEcCCEEEEEeCC----CcEEEEECCCCceeeeecC----CCCccEEEEEeCCCEEEEec
Confidence 4332221 112223344556777777755 4788899876553322211 11222334455677777765
Q ss_pred ccCCCCCCcCCCCeeeceeEEEEcCCceeEe
Q 020245 241 EVDPSDLGHLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
. ..+..||+++.+-..
T Consensus 411 d---------------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 411 E---------------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp T---------------TEEEEEETTTCCEEE
T ss_pred C---------------CeEEEEECCCCcEEe
Confidence 1 368899998876543
No 123
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.09 E-value=0.56 Score=39.87 Aligned_cols=201 Identities=8% Similarity=-0.017 Sum_probs=94.4
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCc-------EEEEeeCCCCCCCCcceeEEEEC----C---EEEEEccccCC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLT-------WSVADVTGDVPPPRVGVTMAAVG----H---TIYMFGGRDGT 94 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~-------W~~~~~~~~~p~~r~~~~~~~~~----~---~iyv~GG~~~~ 94 (329)
....+++.|+.+ ..+..||..+.+ -..+... ..........-+ + .+++.|+.+
T Consensus 24 ~~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~g~~~~~l~s~~~d-- 90 (397)
T 1sq9_A 24 ACNSFTVSCSGD-------GYLKVWDNKLLDNENPKDKSYSHFVH----KSGLHHVDVLQAIERDAFELCLVATTSFS-- 90 (397)
T ss_dssp ECSSEEEEEETT-------SEEEEEESBCCTTCCGGGGEEEEECC----TTCEEEEEEEEEEETTTEEEEEEEEEETT--
T ss_pred ecCCeEEEEcCC-------CEEEEEECCCcccccCCCcceEEecC----CCcEEEEEEecccccCCccccEEEEEcCC--
Confidence 344666666642 578889988766 3333321 111112222223 5 677777654
Q ss_pred CCCCCceEEEECCCCc------EEEcccCCCC-CCCcccceeEe----eCCeE-EEEcccCCCcCcceeEEEEcCC----
Q 020245 95 HKELNELYSFDTRTNQ------WTLLSNGDAG-PPHRSYHSTAA----DDRHV-YIFGGCGVSGRLNDLWGFDVVD---- 158 (329)
Q Consensus 95 ~~~~~~~~~~d~~~~~------W~~~~~~~~~-p~~r~~~~~~~----~~~~i-~v~GG~~~~~~~~~~~~~~~~~---- 158 (329)
..+..||..+.+ +..+...... +...-...... -++.. ++.|+.+ ..+..||+.+
T Consensus 91 ----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 91 ----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADE 161 (397)
T ss_dssp ----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSH
T ss_pred ----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCccccc
Confidence 468888877665 5555433100 00111122222 24566 7777654 3577777765
Q ss_pred --Ce---EE---EecC---CCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccC-CCCCCcce
Q 020245 159 --RK---WI---QYPS---AGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSG-EKPTARSV 225 (329)
Q Consensus 159 --~~---W~---~~~~---~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~-~~p~~r~~ 225 (329)
.+ |. .+.. ... .....-.++... ++ +++.|+.+ ..+..||+.+.+-...-... ..+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPM-TPSQFATSVDISERG-LIATGFNN----GTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSS-SSCCCCCEEEECTTS-EEEEECTT----SEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred cccceeeccCcceeeeeecccc-CCCCCceEEEECCCc-eEEEEeCC----CcEEEEECCCCceeEEEeccccccccCCc
Confidence 21 11 1110 000 112223333433 45 66666544 57888998776543322110 01000111
Q ss_pred eEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 226 FSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 226 ~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
..++.+ ++.+++.|+.+.. ...+.+||+.+..
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~-----------~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNS-----------FGCITLYETEFGE 269 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETT-----------EEEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEEecCCC-----------CceEEEEECCCCc
Confidence 222233 5566777764210 1478899987654
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.27 Score=46.46 Aligned_cols=106 Identities=8% Similarity=0.074 Sum_probs=62.0
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe--eC--CeEEEEcccCCCcCcceeEEEEcCC
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA--DD--RHVYIFGGCGVSGRLNDLWGFDVVD 158 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~--~~i~v~GG~~~~~~~~~~~~~~~~~ 158 (329)
+.+++.|+.+ ..+..||..+.++..+.... .......++. .+ +.+++.|+.+ ..+..||..+
T Consensus 21 g~~latg~~d------g~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~ 86 (753)
T 3jro_A 21 GKRLATCSSD------KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEEN 86 (753)
T ss_dssp SCCEEEEETT------TEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEET
T ss_pred CCeEEEEECC------CcEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCC
Confidence 4455666544 46778887766666665542 1111122222 23 6777777765 4688999999
Q ss_pred CeEEEecCCCCCCCCCCCcEEEEE-C--CEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 159 RKWIQYPSAGENCKGRGGPGLIVT-Q--GKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 159 ~~W~~~~~~~~~~~~~~~~~~~~~-~--~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
++|..+.... .....-.++... + +.+++.|+.+ ..+..||..+.
T Consensus 87 ~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~l~sgs~d----g~I~vwdl~~~ 133 (753)
T 3jro_A 87 GRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASSD----GKVSVVEFKEN 133 (753)
T ss_dssp TEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETT----SEEEEEECCSS
T ss_pred Cccccccccc--CCCCCeEEEEECCCCCCCEEEEEeCC----CcEEEEEeecC
Confidence 9887776653 122222233333 2 5677777755 47888887665
No 125
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.06 E-value=0.39 Score=40.82 Aligned_cols=145 Identities=7% Similarity=-0.049 Sum_probs=78.7
Q ss_pred EEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 84 TIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 84 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++++.|+.+ ..+..||..+.+....-... .....-.++... ++.+++.|+.+ ..+..||+.+...
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEE
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCce
Confidence 577777654 46889999877665443321 011111222222 34677777654 4688899998776
Q ss_pred EEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCE-EEEE
Q 020245 162 IQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKH-IVVY 238 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~-i~i~ 238 (329)
..+..... ....-.++.. .++..++.|+.+ ..+..||+.......+.. ....-.++... ++. +++.
T Consensus 154 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 154 QVFAKTDS--WDYWYCCVDVSVSRQMLATGDST----GRLLLLGLDGHEIFKEKL-----HKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEEECCCC--SSCCEEEEEEETTTTEEEEEETT----SEEEEEETTSCEEEEEEC-----SSSCEEEEEECSSCTTEEEE
T ss_pred EEEeccCC--CCCCeEEEEECCCCCEEEEECCC----CCEEEEECCCCEEEEecc-----CCCcEEEEEECCCCCCEEEE
Confidence 66654421 1111222332 356677777654 578888985544443331 11111222222 333 7777
Q ss_pred cCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 239 GGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 239 GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
|+.+ ..+.+||+.+
T Consensus 223 ~~~d--------------~~i~iwd~~~ 236 (383)
T 3ei3_B 223 SSVD--------------ATVKLWDLRN 236 (383)
T ss_dssp EETT--------------SEEEEEEGGG
T ss_pred EeCC--------------CEEEEEeCCC
Confidence 7642 3688889876
No 126
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.04 E-value=0.86 Score=41.53 Aligned_cols=128 Identities=16% Similarity=0.184 Sum_probs=72.1
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeC-CCCc--EEEEeeCCC--CCCC---CcceeEEEECCEEEEEccccCCC
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDL-ETLT--WSVADVTGD--VPPP---RVGVTMAAVGHTIYMFGGRDGTH 95 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~-~~~~--W~~~~~~~~--~p~~---r~~~~~~~~~~~iyv~GG~~~~~ 95 (329)
.+-++.++.||+.... .+.++.+|. .+.+ |+.-..... .+.. ......+..+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----- 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA----- 123 (571)
T ss_dssp SCCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-----
T ss_pred cccEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-----
Confidence 3445679999997652 257999998 6554 765332110 0000 112334567889988643
Q ss_pred CCCCceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC--eEEEecC
Q 020245 96 KELNELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR--KWIQYPS 166 (329)
Q Consensus 96 ~~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~--~W~~~~~ 166 (329)
...++.+|..+. .|+.-..... .......+.++.++++|+-.+.........++.||..+. .|+.-..
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 195 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPK-VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT 195 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGG-GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred --CCEEEEEECCCCCEEEEecCCCCC-ccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccC
Confidence 247999999876 5875322100 000112223345888877543221122357999999876 4876543
No 127
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.99 E-value=0.28 Score=42.74 Aligned_cols=107 Identities=7% Similarity=-0.034 Sum_probs=59.1
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
..+++.|+.+ ..|..||..+..-...-... .+...-.++.. .++.+++.|+.+ ..+-.||+.++.
T Consensus 132 ~~~lasGs~d------g~i~lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~ 198 (435)
T 4e54_B 132 PSTVAVGSKG------GDIMLWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNI 198 (435)
T ss_dssp TTCEEEEETT------SCEEEECSSCCSCCEEECCC--SSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCE
T ss_pred CCEEEEEeCC------CEEEEEECCCCCceeEEEcc--CCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCc
Confidence 4577777655 46888888766433222210 11111122222 256677777765 357889998887
Q ss_pred EEEecCCCCCCCCCCCcEEE-EECCEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 161 WIQYPSAGENCKGRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
...+..... ......++. ..++.+++.|+.+ ..+..+|....
T Consensus 199 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~d----g~i~~wd~~~~ 241 (435)
T 4e54_B 199 LRVFASSDT--INIWFCSLDVSASSRMVVTGDNV----GNVILLNMDGK 241 (435)
T ss_dssp EEEEECCSS--CSCCCCCEEEETTTTEEEEECSS----SBEEEEESSSC
T ss_pred eeEEeccCC--CCccEEEEEECCCCCEEEEEeCC----CcEeeeccCcc
Confidence 665554321 122222333 3356777777755 46788887654
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.95 E-value=0.9 Score=41.07 Aligned_cols=197 Identities=12% Similarity=0.043 Sum_probs=89.3
Q ss_pred CceEEEECCCCcEEE-cccCCC-------CCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCC
Q 020245 99 NELYSFDTRTNQWTL-LSNGDA-------GPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGEN 170 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~-~~~~~~-------~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 170 (329)
..+..+|..+.+-.+ ++..+. -|.+|-.......++..+++..... ..+..+|..+.+-..+...+
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~----g~i~vvd~~~~~~l~~~~i~-- 321 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET----GKVLLVNYKDIDNLTVTSIG-- 321 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT----TEEEEEECTTSSSCEEEEEE--
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC----CeEEEEEecCCCcceeEEec--
Confidence 568888988765332 222110 0222333333333343333333222 57888888765321111111
Q ss_pred CCCCCCcEEEE-ECCE-EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEEC-CEEEEEcCccCCCCC
Q 020245 171 CKGRGGPGLIV-TQGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIG-KHIVVYGGEVDPSDL 247 (329)
Q Consensus 171 ~~~~~~~~~~~-~~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~-~~i~i~GG~~~~~~~ 247 (329)
....-+.... -+++ +|+.+..+ +.+..+|..+.+-......+..|.+......+.-+ +.+|+.+...
T Consensus 322 -~~~~~~~~~~spdg~~l~va~~~~----~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~----- 391 (543)
T 1nir_A 322 -AAPFLHDGGWDSSHRYFMTAANNS----NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG----- 391 (543)
T ss_dssp -CCSSCCCEEECTTSCEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS-----
T ss_pred -cCcCccCceECCCCCEEEEEecCC----CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC-----
Confidence 1222223333 3455 44443222 57888999888655543323333332222222123 5777765321
Q ss_pred CcCCCCeeeceeEEEEcCCc-----eeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEec
Q 020245 248 GHLGAGKFAGELYSLDTETL-----VWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTP 322 (329)
Q Consensus 248 ~~~~~~~~~~~~~~~d~~~~-----~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~ 322 (329)
.+.|-.+|+.+. .|+.+.. ++...... ..+....+.+.||+-.=.+.+......|.+||+
T Consensus 392 --------d~~V~v~d~~~~~~~~~~~~~v~~------l~~~g~~~-~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 392 --------DGSISLIGTDPKNHPQYAWKKVAE------LQGQGGGS-LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp --------SSEEEEEECCTTTCTTTBTSEEEE------EECSCSCC-CCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred --------CceEEEEEeCCCCCchhcCeEEEE------EEcCCCCc-eEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 135777777652 3777665 22211110 122223331345543211111123568888888
Q ss_pred ccCC
Q 020245 323 CLDG 326 (329)
Q Consensus 323 ~~~~ 326 (329)
++.+
T Consensus 457 ~~~~ 460 (543)
T 1nir_A 457 KNLD 460 (543)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 7654
No 129
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.94 E-value=0.55 Score=38.51 Aligned_cols=145 Identities=8% Similarity=-0.001 Sum_probs=77.1
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++.||+..-. ...+++||+.+.+...+... .+-.+.+..-++++++..+ ..+++||+.+.++
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDSFTKQVQRVTMD-----APVSSVALRQSGGYVATIG-------TKFCALNWKEQSA 85 (297)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCCEEEEECS-----SCEEEEEEBTTSSEEEEET-------TEEEEEETTTTEE
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEeCC-----CceEEEEECCCCCEEEEEC-------CeEEEEECCCCcE
Confidence 4678887532 36799999998766544322 1222233334667666531 5789999999988
Q ss_pred EEecCCCCC-CCCCCCcEEEEECCEEEEEeeeCC-------CCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-C
Q 020245 162 IQYPSAGEN-CKGRGGPGLIVTQGKIWVVYGFAG-------VEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-G 232 (329)
Q Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~~~l~v~gG~~~-------~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~ 232 (329)
+.+...... +..+....++.-++++|+..-... .....++++++.. +...+... . ....+++.. +
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~--~---~~pngi~~spd 159 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQ--V---DISNGLDWSLD 159 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEE--E---SBEEEEEECTT
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeec--c---ccccceEEcCC
Confidence 877654211 111111112223577776432111 1235788888753 33333221 1 111233332 3
Q ss_pred -CEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 233 -KHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 233 -~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
+.||+.... ...|++||.
T Consensus 160 g~~lyv~~~~--------------~~~i~~~~~ 178 (297)
T 3g4e_A 160 HKIFYYIDSL--------------SYSVDAFDY 178 (297)
T ss_dssp SCEEEEEEGG--------------GTEEEEEEE
T ss_pred CCEEEEecCC--------------CCcEEEEec
Confidence 367777543 246888876
No 130
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.93 E-value=0.41 Score=40.74 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=71.9
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.+++.|+.+ ..+..||..+.+-....... ........... ++.+++.|+.+ ..+..||..
T Consensus 111 ~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~ 174 (408)
T 4a11_B 111 DTGMFTSSSFD-------KTLKVWDTNTLQTADVFNFE---ETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLK 174 (408)
T ss_dssp CTTCEEEEETT-------SEEEEEETTTTEEEEEEECS---SCEEEEEECSSCSSCCEEEEEESS------SSEEEEESS
T ss_pred CCcEEEEEeCC-------CeEEEeeCCCCccceeccCC---CceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCC
Confidence 33566666532 57889999877654433311 11111111111 23366666544 468888987
Q ss_pred CCcEE-EcccCCCCCCCcccceeEee-CC-eEEEEcccCCCcCcceeEEEEcCCCe--EEEecCCCC----------CCC
Q 020245 108 TNQWT-LLSNGDAGPPHRSYHSTAAD-DR-HVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPSAGE----------NCK 172 (329)
Q Consensus 108 ~~~W~-~~~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~~~~----------~~~ 172 (329)
+.+-. .+... ...-.++... ++ .+++.|+.+ ..+..||+.+.. ...+..... ...
T Consensus 175 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 175 SGSCSHILQGH-----RQEILAVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH 244 (408)
T ss_dssp SSCCCEEECCC-----CSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC
T ss_pred CcceeeeecCC-----CCcEEEEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccc
Confidence 65422 22111 1111122222 33 367777754 357888886643 222211000 001
Q ss_pred CCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 173 GRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 173 ~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
...-.+++.. ++..++.++.+ ..+..||..+.+-
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~ 279 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTD----NRMRLWNSSNGEN 279 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCB
T ss_pred cCceeEEEEcCCCCEEEEecCC----CeEEEEECCCCcc
Confidence 1111222222 45666677654 4688888876543
No 131
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.24 Score=42.49 Aligned_cols=142 Identities=9% Similarity=0.017 Sum_probs=67.5
Q ss_pred CceEEEeCCCCcEE-EEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC--cEEEcccCCCCCC
Q 020245 48 NNLHVFDLETLTWS-VADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN--QWTLLSNGDAGPP 122 (329)
Q Consensus 48 ~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~p~ 122 (329)
..+.+||..+..-. .+.. ... .....++.+ ++.+++.|+.+ ..+..||..+. ....+.... ..
T Consensus 45 ~~v~iw~~~~~~~~~~~~~---~~~-~~~v~~~~~s~~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~--~h 112 (416)
T 2pm9_A 45 SSLELWSLLAADSEKPIAS---LQV-DSKFNDLDWSHNNKIIAGALDN------GSLELYSTNEANNAINSMARFS--NH 112 (416)
T ss_dssp CCCEEEESSSGGGCSCSCC---CCC-SSCEEEEEECSSSSCEEEEESS------SCEEEECCSSTTSCCCEEEECC--CS
T ss_pred CeEEEEEccCCCCCcEEEE---Eec-CCceEEEEECCCCCeEEEEccC------CeEEEeecccccccccchhhcc--CC
Confidence 57888998765422 1111 111 111222233 45566666544 46788887761 111222221 01
Q ss_pred CcccceeEee-C-CeEEEEcccCCCcCcceeEEEEcCCCe------EE-EecCCCCCCCCCCCcEEEEE-C-CEEEEEee
Q 020245 123 HRSYHSTAAD-D-RHVYIFGGCGVSGRLNDLWGFDVVDRK------WI-QYPSAGENCKGRGGPGLIVT-Q-GKIWVVYG 191 (329)
Q Consensus 123 ~r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~~~~~~~~------W~-~~~~~~~~~~~~~~~~~~~~-~-~~l~v~gG 191 (329)
...-.++... + +.+++.|+.+ ..+..||+.+.+ -. .+.... .....-.++... + +.+++.++
T Consensus 113 ~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 113 SSSVKTVKFNAKQDNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSM--SSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp SSCCCEEEECSSSTTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSC--CSSCCCCEEEECSSCTTEEEEES
T ss_pred ccceEEEEEcCCCCCEEEEEcCC-----CeEEEEECCCCcccccccccccccccc--CCCCCeeEEEeCCCCCcEEEEEc
Confidence 1111222222 2 6677777754 357888887664 11 111111 112222333333 2 46777776
Q ss_pred eCCCCcccEEEEeCCCCceEE
Q 020245 192 FAGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 192 ~~~~~~~~~~~~d~~~~~w~~ 212 (329)
.+ ..+..||..+.+-..
T Consensus 186 ~d----g~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 186 SS----NFASIWDLKAKKEVI 202 (416)
T ss_dssp SS----SCEEEEETTTTEEEE
T ss_pred CC----CCEEEEECCCCCcce
Confidence 54 578889987765443
No 132
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.86 E-value=0.76 Score=41.67 Aligned_cols=149 Identities=11% Similarity=0.085 Sum_probs=73.6
Q ss_pred EEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCC---CCcEEEEE-C-CEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 136 VYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGR---GGPGLIVT-Q-GKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 136 i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~---~~~~~~~~-~-~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
+++.|+.+ ..+..||..+.+-...-.. ... .-.++... + +..++.|+.+ ..+..||..+.+.
T Consensus 175 ~l~~~~~d-----~~v~vwd~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~ 241 (615)
T 1pgu_A 175 RSMTVGDD-----GSVVFYQGPPFKFSASDRT----HHKQGSFVRDVEFSPDSGEFVITVGSD----RKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEETT-----TEEEEEETTTBEEEEEECS----SSCTTCCEEEEEECSTTCCEEEEEETT----CCEEEEETTTCCE
T ss_pred EEEEEeCC-----CcEEEEeCCCcceeeeecc----cCCCCceEEEEEECCCCCCEEEEEeCC----CeEEEEECCCCCE
Confidence 66776654 4688888877654333221 111 22233333 4 5677777654 5788899877654
Q ss_pred EEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCccee
Q 020245 211 AQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAF 290 (329)
Q Consensus 211 ~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~ 290 (329)
...-..........-.++...++..++.++.+ ..+..+|+.+..-...-. ....+..... .
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d--------------~~i~~wd~~~~~~~~~~~---~~~~~~~~~~--~ 302 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWLDSQKFATVGAD--------------ATIRVWDVTTSKCVQKWT---LDKQQLGNQQ--V 302 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEESSSSEEEEEETT--------------SEEEEEETTTTEEEEEEE---CCTTCGGGCE--E
T ss_pred eEEecccccccCCceEEEEEcCCCEEEEEcCC--------------CcEEEEECCCCcEEEEEc---CCCCcccCce--e
Confidence 43320000011111222222266777777642 368889988665433222 0000111111 2
Q ss_pred cccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 291 AGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 291 ~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
++...+ +..++.|+.+. .|.+||+.+
T Consensus 303 ~~~~~~--~~~l~~~~~~g------~i~~~d~~~ 328 (615)
T 1pgu_A 303 GVVATG--NGRIISLSLDG------TLNFYELGH 328 (615)
T ss_dssp EEEEEE--TTEEEEEETTS------CEEEEETTE
T ss_pred EEEeCC--CCeEEEEECCC------CEEEEECCC
Confidence 223334 44777777653 566666654
No 133
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.84 E-value=1 Score=45.02 Aligned_cols=146 Identities=12% Similarity=0.012 Sum_probs=75.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||..+.+-...-. .....-.++.+ ++++++.|+.+ ..+..||..
T Consensus 626 ~~~~l~s~~~d-------~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d------~~v~vwd~~ 687 (1249)
T 3sfz_A 626 DGQRIASCGAD-------KTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSAD------KKVKIWDSA 687 (1249)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCC------CeEEEEECC
Confidence 55666667632 578899988765422211 11111222333 45566666544 468899998
Q ss_pred CCcEEEcccCCCCCCCcccceeEee---CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEE-EEC
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAAD---DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLI-VTQ 183 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ 183 (329)
+.+....-.. ....-.++... +..+++.|+.+ ..+..||+.+.+....-.. ....-.+++ ..+
T Consensus 688 ~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~~----h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 688 TGKLVHTYDE----HSEQVNCCHFTNKSNHLLLATGSND-----FFLKLWDLNQKECRNTMFG----HTNSVNHCRFSPD 754 (1249)
T ss_dssp TCCEEEEEEC----CSSCEEEEEECSSSSCCEEEEEETT-----SCEEEEETTSSSEEEEECC----CSSCEEEEEECSS
T ss_pred CCceEEEEcC----CCCcEEEEEEecCCCceEEEEEeCC-----CeEEEEECCCcchhheecC----CCCCEEEEEEecC
Confidence 8754332211 11111112222 33455555543 4588899988764433221 111122222 235
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
+..++.|+.+ ..+..||..+..-
T Consensus 755 ~~~l~s~s~d----g~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 755 DELLASCSAD----GTLRLWDVRSANE 777 (1249)
T ss_dssp TTEEEEEESS----SEEEEEEGGGTEE
T ss_pred CCEEEEEECC----CeEEEEeCCCCcc
Confidence 6677777654 4677888766543
No 134
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.79 E-value=1.2 Score=41.36 Aligned_cols=195 Identities=10% Similarity=0.036 Sum_probs=96.9
Q ss_pred CCceEEEECCCCcEEEcccCCCCCCCcc-cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC-eEEEecCCCCCC-CCC
Q 020245 98 LNELYSFDTRTNQWTLLSNGDAGPPHRS-YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR-KWIQYPSAGENC-KGR 174 (329)
Q Consensus 98 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~-~W~~~~~~~~~~-~~~ 174 (329)
...++.+|..+.+-..+.... ..... .+....-+++.++++..+.......++.+|+.+. ....+....... ...
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGE--PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCS--CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccCC--CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 457999999988765554321 11111 1122223566555555444444568999999998 666654321100 001
Q ss_pred CCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CC-EEEEEcCccCCCCCCc
Q 020245 175 GGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GK-HIVVYGGEVDPSDLGH 249 (329)
Q Consensus 175 ~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~-~i~i~GG~~~~~~~~~ 249 (329)
.......- ++++++.+..+ ....+|.++......+.+... ... ....+.+ ++ .|++.+.....
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~--g~~~l~~~~~~~~~~~~l~~~---~~~--v~~~~~~spdg~~l~~~~~~~~~----- 379 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRD--GWNHLYLYDTTGRLIRQVTKG---EWE--VTNFAGFDPKGTRLYFESTEASP----- 379 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTT--SSCEEEEEETTSCEEEECCCS---SSC--EEEEEEECTTSSEEEEEESSSCT-----
T ss_pred cCCceeecCCCCEEEEEEccC--CccEEEEEECCCCEEEecCCC---CeE--EEeeeEEcCCCCEEEEEecCCCC-----
Confidence 11122233 67765555333 236788888766666665421 111 1121233 33 56665543211
Q ss_pred CCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 250 LGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 250 ~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
....+|.+|.++...+.+.. .... +++....+ +..+++...+. ..-..++++|+++.
T Consensus 380 -----~~~~l~~~d~~~~~~~~l~~---------~~~~--~~~~~spd-g~~l~~~~~~~--~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 380 -----LERHFYCIDIKGGKTKDLTP---------ESGM--HRTQLSPD-GSAIIDIFQSP--TVPRKVTVTNIGKG 436 (706)
T ss_dssp -----TCBEEEEEETTCCCCEESCC---------SSSE--EEEEECTT-SSEEEEEEECS--SCSCEEEEEESSSC
T ss_pred -----ceEEEEEEEcCCCCceeccC---------CCce--EEEEECCC-CCEEEEEecCC--CCCcEEEEEECCCC
Confidence 12478999988776555542 1112 33333333 33555543322 22346788877654
No 135
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.65 Score=37.80 Aligned_cols=186 Identities=10% Similarity=0.012 Sum_probs=84.2
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
.++..++.|+.+ ..+..||..+.+-....... .... .+++. -++.+++.|+.+ ..+..+|..
T Consensus 27 ~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~---~~~v-~~~~~~~~~~~l~~~~~d------g~i~~~~~~ 89 (313)
T 3odt_A 27 VDDSKVASVSRD-------GTVRLWSKDDQWLGTVVYTG---QGFL-NSVCYDSEKELLLFGGKD------TMINGVPLF 89 (313)
T ss_dssp EETTEEEEEETT-------SEEEEEEESSSEEEEEEEEC---SSCE-EEEEEETTTTEEEEEETT------SCEEEEETT
T ss_pred cCCCEEEEEEcC-------CcEEEEECCCCEEEEEeecC---CccE-EEEEECCCCCEEEEecCC------CeEEEEEee
Confidence 455556666532 57888998766543322211 1111 22222 245566666654 356666655
Q ss_pred CCc-EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEE-EE-CC
Q 020245 108 TNQ-WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLI-VT-QG 184 (329)
Q Consensus 108 ~~~-W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~~ 184 (329)
... ...+... .........+..++.+++.|+.+ ..+..||........ ... .....++. .. ++
T Consensus 90 ~~~~~~~~~~~---~~~~~~i~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~-~~~-----~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 90 ATSGEDPLYTL---IGHQGNVCSLSFQDGVVISGSWD-----KTAKVWKEGSLVYNL-QAH-----NASVWDAKVVSFSE 155 (313)
T ss_dssp CCTTSCC-CEE---CCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTEEEEEE-ECC-----SSCEEEEEEEETTT
T ss_pred ecCCCCcccch---hhcccCEEEEEecCCEEEEEeCC-----CCEEEEcCCcEEEec-ccC-----CCceeEEEEccCCC
Confidence 421 1111111 01111222233356666777654 457778732222221 111 11122222 22 56
Q ss_pred EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 185 KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
..++.++.+ ..+..||... .-..+. .............-++. ++.|+. ...+..||+
T Consensus 156 ~~l~~~~~d----~~i~i~d~~~-~~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~--------------dg~i~i~d~ 212 (313)
T 3odt_A 156 NKFLTASAD----KTIKLWQNDK-VIKTFS---GIHNDVVRHLAVVDDGH-FISCSN--------------DGLIKLVDM 212 (313)
T ss_dssp TEEEEEETT----SCEEEEETTE-EEEEEC---SSCSSCEEEEEEEETTE-EEEEET--------------TSEEEEEET
T ss_pred CEEEEEECC----CCEEEEecCc-eEEEEe---ccCcccEEEEEEcCCCe-EEEccC--------------CCeEEEEEC
Confidence 677777654 4677787322 111221 10111122222233556 555653 246888998
Q ss_pred CCce
Q 020245 265 ETLV 268 (329)
Q Consensus 265 ~~~~ 268 (329)
.+.+
T Consensus 213 ~~~~ 216 (313)
T 3odt_A 213 HTGD 216 (313)
T ss_dssp TTCC
T ss_pred Cchh
Confidence 7654
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.73 E-value=1.1 Score=40.45 Aligned_cols=194 Identities=9% Similarity=-0.031 Sum_probs=93.8
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEEC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
.++++|+.+... +.+.++|..+.+-...-..+ .. -|.++.. +..+|+.+.. +.+..||+
T Consensus 147 p~~~~~vs~~~d-------~~V~v~D~~t~~~~~~i~~g---~~--~~~v~~spdg~~l~v~~~d-------~~V~v~D~ 207 (543)
T 1nir_A 147 LPNLFSVTLRDA-------GQIALVDGDSKKIVKVIDTG---YA--VHISRMSASGRYLLVIGRD-------ARIDMIDL 207 (543)
T ss_dssp GGGEEEEEEGGG-------TEEEEEETTTCCEEEEEECS---TT--EEEEEECTTSCEEEEEETT-------SEEEEEET
T ss_pred CCCEEEEEEcCC-------CeEEEEECCCceEEEEEecC---cc--cceEEECCCCCEEEEECCC-------CeEEEEEC
Confidence 367888876532 67899999887654322211 11 2433332 3467776421 67999999
Q ss_pred --CCCcEE-EcccCCCCCCCcccceeEee----CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCC--------CC
Q 020245 107 --RTNQWT-LLSNGDAGPPHRSYHSTAAD----DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGE--------NC 171 (329)
Q Consensus 107 --~~~~W~-~~~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~--------~~ 171 (329)
.+.+-. .++ .+ ..+ .+.++.- +++.++++.... +.+.++|..+.+-.+.-.... .+
T Consensus 208 ~~~t~~~~~~i~-~g--~~p--~~va~sp~~~~dg~~l~v~~~~~----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~ 278 (543)
T 1nir_A 208 WAKEPTKVAEIK-IG--IEA--RSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHP 278 (543)
T ss_dssp TSSSCEEEEEEE-CC--SEE--EEEEECCSTTCTTTEEEEEEEES----SEEEEEETTTCCEEEEEECCEECSSSCCEES
T ss_pred cCCCCcEEEEEe-cC--CCc--ceEEeCCCcCCCCCEEEEEEccC----CeEEEEeccccccceeecccCcccCcccccc
Confidence 665432 222 11 111 2233333 454444444322 567888988876443322210 01
Q ss_pred CCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEE-ECCE-EEEEcCccCCCCCC
Q 020245 172 KGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVG-IGKH-IVVYGGEVDPSDLG 248 (329)
Q Consensus 172 ~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~-~~~~-i~i~GG~~~~~~~~ 248 (329)
.++........ +..+|+... ....++.+|..+.+-..+... +..+..+.++. -+++ +|+....
T Consensus 279 ~~~v~~i~~s~~~~~~~vs~~----~~g~i~vvd~~~~~~l~~~~i---~~~~~~~~~~~spdg~~l~va~~~------- 344 (543)
T 1nir_A 279 EPRVAAIIASHEHPEFIVNVK----ETGKVLLVNYKDIDNLTVTSI---GAAPFLHDGGWDSSHRYFMTAANN------- 344 (543)
T ss_dssp CCCEEEEEECSSSSEEEEEET----TTTEEEEEECTTSSSCEEEEE---ECCSSCCCEEECTTSCEEEEEEGG-------
T ss_pred CCceEEEEECCCCCEEEEEEC----CCCeEEEEEecCCCcceeEEe---ccCcCccCceECCCCCEEEEEecC-------
Confidence 11211111222 344444432 226888888866432221111 11222222222 2444 5544321
Q ss_pred cCCCCeeeceeEEEEcCCceeEe
Q 020245 249 HLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 249 ~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
.+.|..+|+++.+-..
T Consensus 345 -------~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 345 -------SNKVAVIDSKDRRLSA 360 (543)
T ss_dssp -------GTEEEEEETTTTEEEE
T ss_pred -------CCeEEEEECCCCeEEE
Confidence 3468889998876433
No 137
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.71 E-value=0.72 Score=38.14 Aligned_cols=113 Identities=11% Similarity=0.023 Sum_probs=58.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE----CCEEEEEccccCCCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV----GHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
+++.++.|+.+ ..+..||+.+.....+.... .....-..+.+ ++.+++.|+.+ ..+..+|
T Consensus 24 ~g~~lasgs~D-------~~v~lwd~~~~~~~~~~~l~---gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd 87 (316)
T 3bg1_A 24 YGTRLATCSSD-------RSVKIFDVRNGGQILIADLR---GHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWR 87 (316)
T ss_dssp GGCEEEEEETT-------TEEEEEEEETTEEEEEEEEE---CCSSCEEEEEECCGGGSSCEEEEETT------SCEEEEC
T ss_pred CCCEEEEEeCC-------CeEEEEEecCCCcEEEEEEc---CCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEE
Confidence 45666767643 56888888766543332211 11111222333 14566666655 4688889
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEee-C--CeEEEEcccCCCcCcceeEEEEcCCC-eEEEec
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAAD-D--RHVYIFGGCGVSGRLNDLWGFDVVDR-KWIQYP 165 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~~~~~~~-~W~~~~ 165 (329)
..+.+|....... .....-.++... + +.+++.|+.+ ..+..||..+. .|....
T Consensus 88 ~~~~~~~~~~~~~--~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~~ 144 (316)
T 3bg1_A 88 EENGTWEKSHEHA--GHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVKK 144 (316)
T ss_dssp CSSSCCCEEEEEC--CCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEECC
T ss_pred CCCCcceEEEEcc--CCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcceee
Confidence 8877665443321 011111122222 2 5666777654 35777777765 465433
No 138
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.63 E-value=1.5 Score=41.25 Aligned_cols=214 Identities=7% Similarity=-0.034 Sum_probs=106.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCC--------CCCCCce
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGT--------HKELNEL 101 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~~~ 101 (329)
+++.++++........ ..++++|+.+++........ .......-+-+..|++. ..... ......+
T Consensus 173 DG~~la~~~~~~G~e~--~~i~v~dl~tg~~~~~~~~~----~~~~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSDW--RTVKFVGVADGKPLADELKW----VKFSGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp TSSEEEEEEEETTCSE--EEEEEEETTTCCEEEEEEEE----EESCCCEESTTSEEEEE-ECCCC--------CCCCCEE
T ss_pred CCCEEEEEEcCCCCce--EEEEEEECCCCCCCCccCCC----ceeccEEEECCCEEEEE-EecCcccccccccCCCCCEE
Confidence 5555555433222111 46999999998876542211 11001111113334333 22211 1124568
Q ss_pred EEEECCCCcE--EEcccCCCCCCCc-ccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC--e-EEEecCCCCCCCCCC
Q 020245 102 YSFDTRTNQW--TLLSNGDAGPPHR-SYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR--K-WIQYPSAGENCKGRG 175 (329)
Q Consensus 102 ~~~d~~~~~W--~~~~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~--~-W~~~~~~~~~~~~~~ 175 (329)
+.++..+..- ..+-... ..+. .......-+++..++...........++.+|..+. . |..+.... ...
T Consensus 246 ~~~~lgt~~~~~~lv~~~~--~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~- 319 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATP--ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL---KAQ- 319 (741)
T ss_dssp EEEETTSCGGGCEEEECCT--TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS---SSC-
T ss_pred EEEECCCCchhCEEEeccC--CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC---Cce-
Confidence 8888876542 1221111 1111 11222233555444444332223468999999887 6 77776542 111
Q ss_pred CcEEEEECCEEEEEeeeCCCCcccEEEEeCCC--CceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCC
Q 020245 176 GPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAH--AQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAG 253 (329)
Q Consensus 176 ~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~--~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~ 253 (329)
.......++.+|+.... +.....++.+|.++ ..|+.+.... .. ....+...++.+++....+.
T Consensus 320 ~~~~~~dg~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~l~~~~--~~--~l~~~~~~~~~lv~~~~~dg---------- 384 (741)
T 1yr2_A 320 WDFVDGVGDQLWFVSGD-GAPLKKIVRVDLSGSTPRFDTVVPES--KD--NLESVGIAGNRLFASYIHDA---------- 384 (741)
T ss_dssp EEEEEEETTEEEEEECT-TCTTCEEEEEECSSSSCEEEEEECCC--SS--EEEEEEEEBTEEEEEEEETT----------
T ss_pred EEEEeccCCEEEEEECC-CCCCCEEEEEeCCCCccccEEEecCC--CC--eEEEEEEECCEEEEEEEECC----------
Confidence 11122345666666432 22346799999877 5788876421 11 11223344777777654321
Q ss_pred eeeceeEEEEcCCceeEeec
Q 020245 254 KFAGELYSLDTETLVWTRWD 273 (329)
Q Consensus 254 ~~~~~~~~~d~~~~~W~~~~ 273 (329)
...++.+|+....-+.+.
T Consensus 385 --~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 385 --KSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp --EEEEEEEETTSCEEEECB
T ss_pred --EEEEEEEeCCCCceeecc
Confidence 357899998666555554
No 139
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.58 E-value=0.75 Score=37.42 Aligned_cols=182 Identities=11% Similarity=0.019 Sum_probs=91.2
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCc--EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQ--WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
.+++++.|..+ ..+..+|.++.+ |+.-.... .......+.-++++++.+. +.+..||+ +.
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~----~~~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G 65 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG----WECNSVAATKAGEILFSYS-------KGAKMITR-DG 65 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCTT----CCCCEEEECTTSCEEEECB-------SEEEEECT-TS
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc----CCCcCeEECCCCCEEEeCC-------CCEEEECC-CC
Confidence 35677765433 678899987664 65433210 1223334445788888432 46899998 44
Q ss_pred --eEEEecCCCCCCCCCCCcEE-EEECCEEEEEeeeCCCCcccEEEEeCCCCc-eEEeeccCCCCC--CcceeEEEEECC
Q 020245 160 --KWIQYPSAGENCKGRGGPGL-IVTQGKIWVVYGFAGVEVDDVHCFDPAHAQ-WAQVETSGEKPT--ARSVFSTVGIGK 233 (329)
Q Consensus 160 --~W~~~~~~~~~~~~~~~~~~-~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~-w~~~~~~~~~p~--~r~~~~~~~~~~ 233 (329)
.|+.-... ....+++ ...++++++..... ...++.+|++... |+. ......+. ..........++
T Consensus 66 ~~~W~~~~~~-----~~~~~~~~~~~dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~-~~~~~~~~~~~~~~~v~~~~~G 136 (276)
T 3no2_A 66 RELWNIAAPA-----GCEMQTARILPDGNALVAWCGH---PSTILEVNMKGEVLSKT-EFETGIERPHAQFRQINKNKKG 136 (276)
T ss_dssp CEEEEEECCT-----TCEEEEEEECTTSCEEEEEEST---TEEEEEECTTSCEEEEE-EECCSCSSGGGSCSCCEECTTS
T ss_pred CEEEEEcCCC-----CccccccEECCCCCEEEEecCC---CCEEEEEeCCCCEEEEE-eccCCCCcccccccCceECCCC
Confidence 36644321 1112222 23466776654421 2578888875442 332 21111111 111122233455
Q ss_pred EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc-eeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCC
Q 020245 234 HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL-VWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSND 312 (329)
Q Consensus 234 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~ 312 (329)
.+++.... ...+.+||.+.+ .|+ +.. + ... +++....+ +.+++.+..+
T Consensus 137 ~~lv~~~~--------------~~~v~~~d~~G~~~w~-~~~-------~-~~~---~~~~~~~~-g~~~v~~~~~---- 185 (276)
T 3no2_A 137 NYLVPLFA--------------TSEVREIAPNGQLLNS-VKL-------S-GTP---FSSAFLDN-GDCLVACGDA---- 185 (276)
T ss_dssp CEEEEETT--------------TTEEEEECTTSCEEEE-EEC-------S-SCC---CEEEECTT-SCEEEECBTT----
T ss_pred CEEEEecC--------------CCEEEEECCCCCEEEE-EEC-------C-CCc---cceeEcCC-CCEEEEeCCC----
Confidence 66655432 246899999844 354 332 1 111 23333333 4477776543
Q ss_pred cccceEEEecc
Q 020245 313 RLDDIYFFTPC 323 (329)
Q Consensus 313 ~~~~v~~~~~~ 323 (329)
..|..||++
T Consensus 186 --~~v~~~d~~ 194 (276)
T 3no2_A 186 --HCFVQLNLE 194 (276)
T ss_dssp --SEEEEECTT
T ss_pred --CeEEEEeCc
Confidence 246666666
No 140
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.76 Score=37.40 Aligned_cols=189 Identities=8% Similarity=0.035 Sum_probs=89.5
Q ss_pred EEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCC
Q 020245 79 AAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVD 158 (329)
Q Consensus 79 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~ 158 (329)
+..++.+++.|+.+ ..+..||....... +... ..+.........++..++.|+.+ ..+..||...
T Consensus 110 ~~~~~~~l~~~~~d------~~i~~~d~~~~~~~-~~~~---~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 174 (313)
T 3odt_A 110 LSFQDGVVISGSWD------KTAKVWKEGSLVYN-LQAH---NASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDK 174 (313)
T ss_dssp EEEETTEEEEEETT------SEEEEEETTEEEEE-EECC---SSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTE
T ss_pred EEecCCEEEEEeCC------CCEEEEcCCcEEEe-cccC---CCceeEEEEccCCCCEEEEEECC-----CCEEEEecCc
Confidence 33455566666544 46777883222222 1111 11121222222256667777654 3577787332
Q ss_pred CeEEEecCCCCCCCCCCCcEEE-EECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEE
Q 020245 159 RKWIQYPSAGENCKGRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIV 236 (329)
Q Consensus 159 ~~W~~~~~~~~~~~~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~ 236 (329)
.. ..+... ....-.++. ..++. ++.|+.+ ..+..||..+.+-...-. . ....-.+++.. ++. +
T Consensus 175 ~~-~~~~~~----~~~~i~~~~~~~~~~-~~~~~~d----g~i~i~d~~~~~~~~~~~--~--~~~~i~~~~~~~~~~-l 239 (313)
T 3odt_A 175 VI-KTFSGI----HNDVVRHLAVVDDGH-FISCSND----GLIKLVDMHTGDVLRTYE--G--HESFVYCIKLLPNGD-I 239 (313)
T ss_dssp EE-EEECSS----CSSCEEEEEEEETTE-EEEEETT----SEEEEEETTTCCEEEEEE--C--CSSCEEEEEECTTSC-E
T ss_pred eE-EEEecc----CcccEEEEEEcCCCe-EEEccCC----CeEEEEECCchhhhhhhh--c--CCceEEEEEEecCCC-E
Confidence 22 222211 122222333 34566 6666644 578889987654332221 1 11112223222 344 4
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccc
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDD 316 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~ 316 (329)
+.|+. -..+..||+++.+....-. .+.... .+++...+ +. ++.|+.+. .
T Consensus 240 ~~~~~--------------dg~v~iwd~~~~~~~~~~~------~~~~~i---~~~~~~~~-~~-~~~~~~dg------~ 288 (313)
T 3odt_A 240 VSCGE--------------DRTVRIWSKENGSLKQVIT------LPAISI---WSVDCMSN-GD-IIVGSSDN------L 288 (313)
T ss_dssp EEEET--------------TSEEEEECTTTCCEEEEEE------CSSSCE---EEEEECTT-SC-EEEEETTS------C
T ss_pred EEEec--------------CCEEEEEECCCCceeEEEe------ccCceE---EEEEEccC-CC-EEEEeCCC------c
Confidence 55553 2468899988775443332 122222 33444443 34 45566543 6
Q ss_pred eEEEecccCCcc
Q 020245 317 IYFFTPCLDGIE 328 (329)
Q Consensus 317 v~~~~~~~~~~~ 328 (329)
|.+|++++.++.
T Consensus 289 i~iw~~~~~~~~ 300 (313)
T 3odt_A 289 VRIFSQEKSRWA 300 (313)
T ss_dssp EEEEESCGGGCC
T ss_pred EEEEeCCCCcee
Confidence 788888776553
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.54 E-value=1.6 Score=40.86 Aligned_cols=119 Identities=16% Similarity=0.152 Sum_probs=61.5
Q ss_pred CCEEEEEcCc-cCCCCccCCceEEEeCCCCcEEEEeeCCCCCC---------------CC------cceeEEEECCEEEE
Q 020245 30 GQKVYAFGGE-FTPRVPVDNNLHVFDLETLTWSVADVTGDVPP---------------PR------VGVTMAAVGHTIYM 87 (329)
Q Consensus 30 ~~~l~~~GG~-~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~---------------~r------~~~~~~~~~~~iyv 87 (329)
+++.+++++. .... ....++.+|+.+.+...+........ .+ .......-+++.++
T Consensus 47 dG~~la~~~~~d~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~ 124 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDR--NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLL 124 (741)
T ss_dssp TSSEEEEEECCSSCT--TEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEE
T ss_pred CCCEEEEEeccCCCC--cccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEE
Confidence 5655555543 2111 12479999999888766554211110 00 11112222444444
Q ss_pred EccccCCCCCCCceEEEECCCC---cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEe
Q 020245 88 FGGRDGTHKELNELYSFDTRTN---QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQY 164 (329)
Q Consensus 88 ~GG~~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~ 164 (329)
++.. ..++.+|..+. .-..+... ..........-+++.++++.. ..++.+|+.+++...+
T Consensus 125 ~~~~-------~~i~~~d~~~~~~~~~~~l~~~----~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 125 FPLG-------GELYLYDLKQEGKAAVRQLTHG----EGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQL 187 (741)
T ss_dssp EEET-------TEEEEEESSSCSTTSCCBCCCS----SSCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEEC
T ss_pred EEeC-------CcEEEEECCCCCcceEEEcccC----CcccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEe
Confidence 4322 68999998876 44333222 111122222335665555432 3799999999887777
Q ss_pred cCC
Q 020245 165 PSA 167 (329)
Q Consensus 165 ~~~ 167 (329)
...
T Consensus 188 ~~~ 190 (741)
T 2ecf_A 188 TAD 190 (741)
T ss_dssp CCC
T ss_pred ccC
Confidence 654
No 142
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.53 E-value=0.89 Score=37.91 Aligned_cols=144 Identities=9% Similarity=-0.035 Sum_probs=72.7
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
+.+++.|+.+ ..+..||..+.......... .....-..+.+ ++.+++.|+.+ ..+..||..+
T Consensus 54 g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~ 117 (368)
T 3mmy_A 54 GNFLIAGSWA-------NDVRCWEVQDSGQTIPKAQQ---MHTGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSS 117 (368)
T ss_dssp SEEEEEEETT-------SEEEEEEECTTSCEEEEEEE---ECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred ceEEEEECCC-------CcEEEEEcCCCCceeEEEec---cccCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCC
Confidence 3777777643 56888888763332211110 11111222222 45566666544 4788999988
Q ss_pred CcEEEcccCCCCCCCcccceeE--eeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEE
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTA--ADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKI 186 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 186 (329)
.+....... ..+. ..... ..++.+++.|+.+ ..+..||+.+.+-...-.. .....+.......+
T Consensus 118 ~~~~~~~~~---~~~v-~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 118 NQAIQIAQH---DAPV-KTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMMVLQL-----PERCYCADVIYPMA 183 (368)
T ss_dssp TEEEEEEEC---SSCE-EEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSEEEEC-----SSCEEEEEEETTEE
T ss_pred CCceeeccc---cCce-EEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEEEEec-----CCCceEEEecCCee
Confidence 876554332 1111 11111 2356777777764 4688888877642222211 11222223344444
Q ss_pred EEEeeeCCCCcccEEEEeCCCCc
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
++ +..+ ..+..|+.....
T Consensus 184 ~~-~~~~----~~i~~~~~~~~~ 201 (368)
T 3mmy_A 184 VV-ATAE----RGLIVYQLENQP 201 (368)
T ss_dssp EE-EEGG----GCEEEEECSSSC
T ss_pred EE-EeCC----CcEEEEEecccc
Confidence 43 3332 467778776543
No 143
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.52 E-value=0.052 Score=46.22 Aligned_cols=109 Identities=8% Similarity=0.016 Sum_probs=52.0
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++++++.|+.+ ..+..||..+..|..+..... ....-.++.. -++++++.|+.+ ..+..||+.+..
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEEETT-----SSEEEC------
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCC
Confidence 45566666544 467788888887777665521 1111112222 256677777754 357888888766
Q ss_pred -EEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 161 -WIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 161 -W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
|....... .....-.++.. .+++.++.|+.+ ..+..||..+.+
T Consensus 89 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~ 133 (377)
T 3dwl_C 89 TWKQTLVLL--RLNRAATFVRWSPNEDKFAVGSGA----RVISVCYFEQEN 133 (377)
T ss_dssp CCCCEEECC--CCSSCEEEEECCTTSSCCEEEESS----SCEEECCC----
T ss_pred ceeeeeEec--ccCCceEEEEECCCCCEEEEEecC----CeEEEEEECCcc
Confidence 43333321 11112222222 246667777654 467777776654
No 144
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.52 E-value=0.79 Score=37.28 Aligned_cols=218 Identities=11% Similarity=0.019 Sum_probs=107.9
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
.+++++.+..+ +.+..+|+++.+ |+.-... ....++..+.-++++++.+ .+.+..||+.
T Consensus 4 ~~~~lv~~~~~-------~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGW-------NKIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILFSY--------SKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTC-------SEEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEEEC--------BSEEEEECTT
T ss_pred CCcEEEeeCCC-------CEEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEEeC--------CCCEEEECCC
Confidence 45677766532 678899987665 4432210 0122333444467787732 2458999984
Q ss_pred CC-cEEEcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCe-EEEecCCC-CCCCCCCCcEEEEEC
Q 020245 108 TN-QWTLLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRK-WIQYPSAG-ENCKGRGGPGLIVTQ 183 (329)
Q Consensus 108 ~~-~W~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~-W~~~~~~~-~~~~~~~~~~~~~~~ 183 (329)
.. .|+.-... ....+++. ..++++++..... ...++.+|+.... |+.-.... ..+...........+
T Consensus 65 G~~~W~~~~~~-----~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 65 GRELWNIAAPA-----GCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp SCEEEEEECCT-----TCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CCEEEEEcCCC-----CccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 32 46543321 11122222 3466776664421 1467888875442 44321111 001111222234456
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCC-ceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEE
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHA-QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSL 262 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~-~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
+.+++....+ ..+..||++.. .|+.-.. . .........++.+++.+.. ...+..+
T Consensus 136 G~~lv~~~~~----~~v~~~d~~G~~~w~~~~~--~----~~~~~~~~~~g~~~v~~~~--------------~~~v~~~ 191 (276)
T 3no2_A 136 GNYLVPLFAT----SEVREIAPNGQLLNSVKLS--G----TPFSSAFLDNGDCLVACGD--------------AHCFVQL 191 (276)
T ss_dssp SCEEEEETTT----TEEEEECTTSCEEEEEECS--S----CCCEEEECTTSCEEEECBT--------------TSEEEEE
T ss_pred CCEEEEecCC----CEEEEECCCCCEEEEEECC--C----CccceeEcCCCCEEEEeCC--------------CCeEEEE
Confidence 6666654322 57889998633 3543221 1 1112333336678877653 1368999
Q ss_pred EcCCc--eeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEc
Q 020245 263 DTETL--VWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYG 305 (329)
Q Consensus 263 d~~~~--~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~G 305 (329)
|+++. .|+.-.. ..+..|...-.++.+..+ +.+|+..
T Consensus 192 d~~tG~~~w~~~~~-----~~~~~~l~~~~~~~~~~~-G~i~v~~ 230 (276)
T 3no2_A 192 NLESNRIVRRVNAN-----DIEGVQLFFVAQLFPLQN-GGLYICN 230 (276)
T ss_dssp CTTTCCEEEEEEGG-----GSBSCCCSEEEEEEECTT-SCEEEEE
T ss_pred eCcCCcEEEEecCC-----CCCCccccccccceEcCC-CCEEEEe
Confidence 99843 4765432 012223221134444444 6688876
No 145
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.46 E-value=0.66 Score=36.00 Aligned_cols=156 Identities=12% Similarity=0.170 Sum_probs=86.5
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEee---CCCCCCCCcceeEEEE-CCEEEEEccccCCCCCC
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADV---TGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKEL 98 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~---~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 98 (329)
.-+++..++++|+|-| +.+|+++.....+..... -..+|. ...++.... ++++|+|=|
T Consensus 26 fDAi~~~~g~~y~Fkg---------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iDAa~~~~~~~~iyfFkG-------- 87 (207)
T 1pex_A 26 LDAITSLRGETMIFKD---------RFFWRLHPQQVDAELFLTKSFWPELPN-RIDAAYEHPSHDLIFIFRG-------- 87 (207)
T ss_dssp CSEEEEETTEEEEEET---------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCCEEEEETTTTEEEEEET--------
T ss_pred EeEEEeCCCcEEEEEC---------CEEEEEeCCCcCCCceehhHhccCCCC-CccEEEEeccCCcEEEEcc--------
Confidence 3455567899999987 568888765444432221 112442 333333222 589999965
Q ss_pred CceEEEECCCCcE---EEcccCCCCCCC--cccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEE-----ec-C
Q 020245 99 NELYSFDTRTNQW---TLLSNGDAGPPH--RSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ-----YP-S 166 (329)
Q Consensus 99 ~~~~~~d~~~~~W---~~~~~~~~~p~~--r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~-----~~-~ 166 (329)
+.+|+|+..+..- +.+...+ .|.. .-.++.... ++++|+|-| +..++||..+++-.. +. .
T Consensus 88 ~~~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~ 159 (207)
T 1pex_A 88 RKFWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEED 159 (207)
T ss_dssp TEEEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHH
T ss_pred CEEEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHc
Confidence 3477876432211 2333222 1221 222222222 579999988 678999988764321 11 0
Q ss_pred CCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEE
Q 020245 167 AGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~ 212 (329)
.+..| ... .++...++++|++-| +..|+||..+.+-..
T Consensus 160 ~~Gip-~~i-DaAf~~~g~~YfFkg------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 160 FPGIG-DKV-DAVYEKNGYIYFFNG------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp STTSC-SCC-SEEEEETTEEEEEET------TEEEEEETTTTEEEE
T ss_pred CCCCC-CCc-cEEEEcCCcEEEEEC------CEEEEEeCCccEEec
Confidence 11111 222 333456899999977 689999987765543
No 146
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.43 E-value=1.5 Score=39.77 Aligned_cols=195 Identities=8% Similarity=-0.026 Sum_probs=89.4
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCC----cE-EEEeeCCCCCCCC-cceeEEEE--CCEEEEEccccCCCCCCCc
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETL----TW-SVADVTGDVPPPR-VGVTMAAV--GHTIYMFGGRDGTHKELNE 100 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~----~W-~~~~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 100 (329)
.+++++++|+ . +.+..||+.+. +- ..+... ... .......- ++++++.|+.+ ..
T Consensus 28 pdg~~l~~~~--~------~~v~v~~~~~~~~~~~~~~~~~~h----~~~~v~~~~~sp~~~~~~l~s~~~d------g~ 89 (615)
T 1pgu_A 28 PTTNAIAYPC--G------KSAFVRCLDDGDSKVPPVVQFTGH----GSSVVTTVKFSPIKGSQYLCSGDES------GK 89 (615)
T ss_dssp TTTTEEEEEE--T------TEEEEEECCSSCCSSCSEEEECTT----TTSCEEEEEECSSTTCCEEEEEETT------SE
T ss_pred CCCCEEEEec--C------CeEEEEECCCCCCccccceEEecC----CCceEEEEEECcCCCCCEEEEecCC------CE
Confidence 3666666665 1 56889998865 32 222211 111 11222222 45677776654 46
Q ss_pred eEEEECCCC------cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCC
Q 020245 101 LYSFDTRTN------QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGR 174 (329)
Q Consensus 101 ~~~~d~~~~------~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 174 (329)
+..||..+. ....+..... ....-......-+++.++.++.+.. ....++.+|... .-..+.. ...
T Consensus 90 v~vw~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~-~~~~~~~-----~~~ 161 (615)
T 1pgu_A 90 VIVWGWTFDKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN-SLGEVSG-----HSQ 161 (615)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC-EEEECCS-----CSS
T ss_pred EEEEeCCCCcccccccccccchhhc-ccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC-cceeeec-----CCc
Confidence 777877543 2222222210 1111112222235666666664332 234566666222 1122211 111
Q ss_pred CCcEEEEE-CCE-EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCc-ceeEEEEE-C-CEEEEEcCccCCCCCCc
Q 020245 175 GGPGLIVT-QGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTAR-SVFSTVGI-G-KHIVVYGGEVDPSDLGH 249 (329)
Q Consensus 175 ~~~~~~~~-~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r-~~~~~~~~-~-~~i~i~GG~~~~~~~~~ 249 (329)
.-.++... ++. +++.++.+ ..+..||..+.+-...-. ...... .-.++... + +.+++.|+.+
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d----~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d------- 228 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDD----GSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSD------- 228 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETT----TEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETT-------
T ss_pred cEEEEEECCCCCcEEEEEeCC----CcEEEEeCCCcceeeeec--ccCCCCceEEEEEECCCCCCEEEEEeCC-------
Confidence 22222222 333 66666654 578888876554332221 111100 12222222 4 5677777642
Q ss_pred CCCCeeeceeEEEEcCCcee
Q 020245 250 LGAGKFAGELYSLDTETLVW 269 (329)
Q Consensus 250 ~~~~~~~~~~~~~d~~~~~W 269 (329)
..+..+|+.+.+.
T Consensus 229 -------g~i~vwd~~~~~~ 241 (615)
T 1pgu_A 229 -------RKISCFDGKSGEF 241 (615)
T ss_dssp -------CCEEEEETTTCCE
T ss_pred -------CeEEEEECCCCCE
Confidence 4688899876654
No 147
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.41 E-value=0.91 Score=37.31 Aligned_cols=202 Identities=9% Similarity=-0.039 Sum_probs=100.7
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
+.||+.+... +.+++|++ +.+.+.+... ... -..++. -++++|+... ....+.+||+. .
T Consensus 57 ~~l~~~d~~~-------~~i~~~~~-~g~~~~~~~~----~~~-~~gl~~d~dG~l~v~~~------~~~~v~~~~~~-g 116 (305)
T 3dr2_A 57 RTLVWSDLVG-------RRVLGWRE-DGTVDVLLDA----TAF-TNGNAVDAQQRLVHCEH------GRRAITRSDAD-G 116 (305)
T ss_dssp TEEEEEETTT-------TEEEEEET-TSCEEEEEES----CSC-EEEEEECTTSCEEEEET------TTTEEEEECTT-S
T ss_pred CEEEEEECCC-------CEEEEEeC-CCCEEEEeCC----CCc-cceeeECCCCCEEEEEC------CCCEEEEECCC-C
Confidence 3577776432 57899998 4555544432 111 122222 2567877532 12468889886 5
Q ss_pred cEEEcccCC-CCCCCcccceeEeeCCeEEEE----cccCC--------CcCcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 110 QWTLLSNGD-AGPPHRSYHSTAADDRHVYIF----GGCGV--------SGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 110 ~W~~~~~~~-~~p~~r~~~~~~~~~~~i~v~----GG~~~--------~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
+.+.+.... ..+..+-...++.-++++|+. |-... ......++++|+.+++.+.+. .. .. .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~----~~-p 190 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL----DH-P 190 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE----SS-E
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC----CC-C
Confidence 565553321 101112223333447788885 32110 012357999999888877665 21 11 1
Q ss_pred cEEEEE-CC-EEEEEeeeCCC-CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCC
Q 020245 177 PGLIVT-QG-KIWVVYGFAGV-EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAG 253 (329)
Q Consensus 177 ~~~~~~-~~-~l~v~gG~~~~-~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~ 253 (329)
..++.. ++ .+|+....... ....+++|+...............+.......++--+++||+..+
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~------------- 257 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG------------- 257 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-------------
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-------------
Confidence 223333 34 47776432100 125788998865542211110011111111112222557776542
Q ss_pred eeeceeEEEEcCCceeEeecC
Q 020245 254 KFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 254 ~~~~~~~~~d~~~~~W~~~~~ 274 (329)
..|++||++......+..
T Consensus 258 ---~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 258 ---TGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp ---SEEEEECTTSCEEEEEEC
T ss_pred ---CcEEEECCCCCEEEEEEC
Confidence 359999998887777764
No 148
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.38 E-value=0.99 Score=37.56 Aligned_cols=196 Identities=10% Similarity=0.057 Sum_probs=90.7
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCC--CcEEEcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCC
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRT--NQWTLLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVD 158 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~ 158 (329)
++++++.|+.+ ..+..+|... ..++.+.... .....-.++. .-++.+++.|+.+ ..+..||..+
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVLQ--EHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEEC--CCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEec--cCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCC
Confidence 45666666655 4677888742 3344433331 0111111111 2256777777765 3577888888
Q ss_pred CeEEEecCCCCCCCCCCCcEEEEEC---CEEEEEeeeCCCCcccEEEEeCCC------CceEEeeccCCCCCCcceeEEE
Q 020245 159 RKWIQYPSAGENCKGRGGPGLIVTQ---GKIWVVYGFAGVEVDDVHCFDPAH------AQWAQVETSGEKPTARSVFSTV 229 (329)
Q Consensus 159 ~~W~~~~~~~~~~~~~~~~~~~~~~---~~l~v~gG~~~~~~~~~~~~d~~~------~~w~~~~~~~~~p~~r~~~~~~ 229 (329)
..|..+..+.. ....-.++.... +..++.|+.+ ..+..||... ..|..+..... .....-.+++
T Consensus 185 ~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~s~D----~~v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~v~ 257 (330)
T 2hes_X 185 DDWECVAVLNG--HEGTVWSSDFDKTEGVFRLCSGSDD----STVRVWKYMGDDEDDQQEWVCEAILPD-VHKRQVYNVA 257 (330)
T ss_dssp TEEEEEEEECC--CSSCEEEEEECCSSSSCEEEEEETT----SCEEEEEEEEECTTSCEEEEEEEECCS-CCSSCEEEEE
T ss_pred CCeeEEEEccC--CCCcEEEEEecCCCCeeEEEEEeCC----CeEEEEEecCCCccccceeEEeeeccc-ccccceEEEE
Confidence 87776655421 111112222222 3455566644 2344444422 23444432110 0111222232
Q ss_pred EECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCc-ceecccccC--CcceEEEEcC
Q 020245 230 GIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGW-CAFAGGLRG--GKHGLLVYGG 306 (329)
Q Consensus 230 ~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~-~~~~~~~~~--~~~~i~i~GG 306 (329)
...+.+++.||.+ ..+.+||..+..|..+.. ....... .-.+++... + +.+++.||
T Consensus 258 ~s~~~~l~s~~~d--------------g~v~iw~~~~~~~~~~~~------~~~~h~~~~v~~v~~~~~~~-~~~las~s 316 (330)
T 2hes_X 258 WGFNGLIASVGAD--------------GVLAVYEEVDGEWKVFAK------RALCHGVYEINVVKWLELNG-KTILATGG 316 (330)
T ss_dssp ECTTSCEEEEETT--------------SCEEEEEEETTEEEEEEE------ESCTTTTSCEEEEEEC------CCEEEEE
T ss_pred EcCCCEEEEEeCC--------------CEEEEEEcCCCceEEEec------cccccccceEEEEEEecCCC-ceEEEEec
Confidence 2244556666642 357788888888866543 1111110 002222222 2 44788888
Q ss_pred CCCCCCcccceEEEeccc
Q 020245 307 NSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 307 ~~~~~~~~~~v~~~~~~~ 324 (329)
.+. .|.++++++
T Consensus 317 ~Dg------~v~~W~~~~ 328 (330)
T 2hes_X 317 DDG------IVNFWSLEK 328 (330)
T ss_dssp TTS------EEEEEEC--
T ss_pred CCC------cEEEEEecc
Confidence 664 466666654
No 149
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=95.37 E-value=0.68 Score=35.57 Aligned_cols=155 Identities=12% Similarity=0.138 Sum_probs=87.5
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCC--cEEEEee---CCCCCCCCcceeEEE-ECCEEEEEccccCCCC
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETL--TWSVADV---TGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHK 96 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~---~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 96 (329)
.-+++.+++++|+|-| +.+|+++.... ....... -..+|. ...++... .++++|+|-|
T Consensus 9 fDAi~~~~g~~yfFkg---------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~-~IDAa~~~~~~~~~yfFkG------ 72 (195)
T 1itv_A 9 FDAIAEIGNQLYLFKD---------GKYWRFSEGRGSRPQGPFLIADKWPALPR-KLDSVFEEPLSKKLFFFSG------ 72 (195)
T ss_dssp CSEEEEETTEEEEEET---------TEEEEECCSSSCCCEEEEEHHHHCTTSCS-SCSEEEECTTTCCEEEEET------
T ss_pred CCEEEEeCCEEEEEEC---------CEEEEEECCccccCCCcEEhhhccCCCCC-CccEEEEECCCCeEEEEeC------
Confidence 4456667999999988 56888876542 2222111 112443 23333322 2578999866
Q ss_pred CCCceEEEECCCCcE-EEcccCCCCCC--CcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEE-----ec-CC
Q 020245 97 ELNELYSFDTRTNQW-TLLSNGDAGPP--HRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ-----YP-SA 167 (329)
Q Consensus 97 ~~~~~~~~d~~~~~W-~~~~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~-----~~-~~ 167 (329)
+.+|+|+..+..- +.+...+ .|. ..-.++....++++|+|-| +..++||..+++-.. +. .-
T Consensus 73 --~~yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w 142 (195)
T 1itv_A 73 --RQVWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMF 142 (195)
T ss_dssp --TEEEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHS
T ss_pred --CEEEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcC
Confidence 4578887543111 1122222 122 1233333334789999987 578999988765321 11 11
Q ss_pred CCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 168 GENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
+.. +..-.++...++.+|.+-| +..|+||..+..-.
T Consensus 143 ~Gv--p~~idaa~~~~g~~Yffkg------~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 143 PGV--PLDTHDVFQFREKAYFCQD------RFYWRVSSRSELNQ 178 (195)
T ss_dssp TTS--CSSCSEEEEETTEEEEEET------TEEEEEECCTTCCE
T ss_pred CCC--CCCCCEEEEeCCeEEEEeC------CEEEEEECCccEEe
Confidence 111 2223344456799999977 68999998776544
No 150
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.32 E-value=1.3 Score=38.34 Aligned_cols=135 Identities=13% Similarity=0.073 Sum_probs=69.3
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
+.|+.+|..+.+...+-... .....-.++.+ ++++++.|+.+ ..+..||..+.+-...-.. ...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~~~~~~~~-----h~~ 190 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMTS-----HSA 190 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECC-----CSS
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCcEEEEEeC-----CCC
Confidence 67999999988765544321 11111223333 45677777655 4688899988753322211 122
Q ss_pred cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEE-EECCEEEEEeeeCCCCcccEEEEe
Q 020245 126 YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFD 204 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d 204 (329)
...++..++.+++.|+.+ ..+..+|..........-.. ......... ..++..++.++.+ ..+..++
T Consensus 191 ~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~~~~~---h~~~~~~~~~~~~g~~l~s~~~D----~~v~i~~ 258 (420)
T 4gga_A 191 RVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVATLSG---HSQEVCGLRWAPDGRHLASGGND----NLVNVWP 258 (420)
T ss_dssp CEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETT----SCEEEEE
T ss_pred ceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeEEecc---cccceeeeeecCCCCeeeeeecc----ccceEEe
Confidence 233344567777777754 35666776654322111110 111111122 2245566666644 4566666
Q ss_pred CCCC
Q 020245 205 PAHA 208 (329)
Q Consensus 205 ~~~~ 208 (329)
..+.
T Consensus 259 ~~~~ 262 (420)
T 4gga_A 259 SAPG 262 (420)
T ss_dssp SSCC
T ss_pred eccc
Confidence 6543
No 151
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.31 E-value=1 Score=37.30 Aligned_cols=153 Identities=6% Similarity=-0.004 Sum_probs=81.2
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
+++||+.+... ..+++||+.+.+...+... +... -.+++. -++++|+..... ......+++||+.+..
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~---~~~~-~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVS---HKAN-PAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDN 123 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEEC---SSSS-EEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeC---CCCC-cceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCE
Confidence 46788876432 4799999998887765432 1111 222222 367888765422 1112468999998887
Q ss_pred EEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeC--CCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CC-EE
Q 020245 161 WIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFA--GVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GK-HI 235 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~--~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~-~i 235 (329)
...+.... .....-..++. -++.+|+..... ......++++|+++.+.+.+.... ....+++.. ++ .|
T Consensus 124 ~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 124 LQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI-----SVANGIALSTDEKVL 196 (333)
T ss_dssp CEEEECSS--SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE-----SSEEEEEECTTSSEE
T ss_pred EEEEEccC--ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC-----CcccceEECCCCCEE
Confidence 65332211 11111222222 256787754321 112357999998877666553211 112233222 33 57
Q ss_pred EEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 236 VVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 236 ~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
|+.... ...+++||+++
T Consensus 197 ~v~~~~--------------~~~i~~~d~~~ 213 (333)
T 2dg1_A 197 WVTETT--------------ANRLHRIALED 213 (333)
T ss_dssp EEEEGG--------------GTEEEEEEECT
T ss_pred EEEeCC--------------CCeEEEEEecC
Confidence 776432 24688888853
No 152
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.30 E-value=1.2 Score=37.82 Aligned_cols=201 Identities=7% Similarity=-0.052 Sum_probs=97.8
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCE-EEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHT-IYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
..++.+|+.+.+.+.+... .....+....- ++. |++... .........++.+|..+..+..+.... +....
T Consensus 168 ~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~~~--~~~~~ 240 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKEHA--EGESC 240 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSCCC--TTEEE
T ss_pred ceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeeccC--CCccc
Confidence 4788999988877666532 11111222221 233 444432 211222368999999887777665421 11111
Q ss_pred cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeC-----------
Q 020245 126 YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFA----------- 193 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~----------- 193 (329)
......-+++.+++...........++.+|+.+.+...+...+ . .. ..... +++++++.+..
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---P--CS-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---S--EE-EEEECSSSSEEEEEECCC----------
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---C--CC-CCccCCCCceEEEecCCcceeecccccc
Confidence 1112223454333333222222245999999988877766542 1 11 22233 67766664421
Q ss_pred -CCCcccEEEEeCCCCceEEeeccCCCC------CC-cceeEEEEECC-EEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 194 -GVEVDDVHCFDPAHAQWAQVETSGEKP------TA-RSVFSTVGIGK-HIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 194 -~~~~~~~~~~d~~~~~w~~~~~~~~~p------~~-r~~~~~~~~~~-~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
......++.+|..+.+.+.+....... .. ...+.....++ .|++...... ...+|.+|+
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~------------~~~l~~~~~ 382 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG------------VPAIYIADV 382 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS------------SCEEEEEEC
T ss_pred ccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC------------CceEEEEEE
Confidence 012367999999887776665321100 00 01111112244 5554443211 236899998
Q ss_pred CCceeEeec
Q 020245 265 ETLVWTRWD 273 (329)
Q Consensus 265 ~~~~W~~~~ 273 (329)
.+..++.+.
T Consensus 383 ~~~~~~~~~ 391 (396)
T 3c5m_A 383 PESYKHLEH 391 (396)
T ss_dssp CTTCC----
T ss_pred ccccccccc
Confidence 888776654
No 153
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.25 E-value=1.1 Score=37.25 Aligned_cols=190 Identities=8% Similarity=0.024 Sum_probs=92.0
Q ss_pred EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-C----CEEEEEccccCCCCCCCceEEEEC
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-G----HTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~----~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
.+++.|+.... ...+..||..+.+........ .... -.++.+ . +.+++.|+.+ ..+..||.
T Consensus 32 ~l~~~~s~~~~----d~~v~iw~~~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~ 97 (357)
T 3i2n_A 32 KFVTMGNFARG----TGVIQLYEIQHGDLKLLREIE---KAKP-IKCGTFGATSLQQRYLATGDFG------GNLHIWNL 97 (357)
T ss_dssp EEEEEEC--CC----CEEEEEEEECSSSEEEEEEEE---ESSC-EEEEECTTCCTTTCCEEEEETT------SCEEEECT
T ss_pred eEEEecCccCC----CcEEEEEeCCCCcccceeeec---ccCc-EEEEEEcCCCCCCceEEEecCC------CeEEEEeC
Confidence 66666754110 267889998887765443321 1111 122222 2 3666666544 46788887
Q ss_pred CCCc--EEEcccCCCCCCCcccce-----eEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEecCCCCCCCCCCCc
Q 020245 107 RTNQ--WTLLSNGDAGPPHRSYHS-----TAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPSAGENCKGRGGP 177 (329)
Q Consensus 107 ~~~~--W~~~~~~~~~p~~r~~~~-----~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~~~~~~~~~~~~ 177 (329)
.+.+ -..+... ........ +...++.+++.|+.+ ..+..||+.+.. ...+...... ....-.
T Consensus 98 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~-~~~~v~ 168 (357)
T 3i2n_A 98 EAPEMPVYSVKGH---KEIINAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGE-NKRDCW 168 (357)
T ss_dssp TSCSSCSEEECCC---SSCEEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTS-CCCCEE
T ss_pred CCCCccEEEEEec---ccceEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCC-CCCceE
Confidence 7654 2222211 01111100 012355667777754 357888887754 3333322100 111122
Q ss_pred EEE-----EECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE----CCEEEEEcCccCCCCCC
Q 020245 178 GLI-----VTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI----GKHIVVYGGEVDPSDLG 248 (329)
Q Consensus 178 ~~~-----~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~----~~~i~i~GG~~~~~~~~ 248 (329)
+++ ..++.+++.|+.+ ..+..||..+.+-..... ....-.++... ++..++.|+.+
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~l~~~~~d------ 233 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDN----GDIKLFDLRNMALRWETN-----IKNGVCSLEFDRKDISMNKLVATSLE------ 233 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETT----SEEEEEETTTTEEEEEEE-----CSSCEEEEEESCSSSSCCEEEEEEST------
T ss_pred EEEEEeccCCCCCEEEEEccC----CeEEEEECccCceeeecC-----CCCceEEEEcCCCCCCCCEEEEECCC------
Confidence 222 1356677777644 578899987766433321 11122233322 45666666532
Q ss_pred cCCCCeeeceeEEEEcCCc
Q 020245 249 HLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 249 ~~~~~~~~~~~~~~d~~~~ 267 (329)
..+..||+.+.
T Consensus 234 --------g~i~i~d~~~~ 244 (357)
T 3i2n_A 234 --------GKFHVFDMRTQ 244 (357)
T ss_dssp --------TEEEEEEEEEE
T ss_pred --------CeEEEEeCcCC
Confidence 35777777654
No 154
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.18 E-value=2.1 Score=40.05 Aligned_cols=256 Identities=9% Similarity=-0.030 Sum_probs=124.4
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCC-cceeEEEE--CCEEEEEccccCCCCCCCceEEEE
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPR-VGVTMAAV--GHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
.++++|.+--... . ....+|+.+....+|+.+.....+.... .......+ +++.++++... .......++++|
T Consensus 82 dG~~~~~~~~~~~--~-~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-~G~~~~~i~v~d 157 (710)
T 2xdw_A 82 KGKRYFYFYNTGL--Q-NQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-SGSDWVTIKFMK 157 (710)
T ss_dssp ETTEEEEEEECSS--C-SSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-TTCSCEEEEEEE
T ss_pred ECCEEEEEEEcCC--c-eEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-CCCceEEEEEEE
Confidence 4556665532111 1 1246788887777787664432121111 11112222 44544544332 122234799999
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCC-----------cCcceeEEEEcCCCeEE--EecCCCCCCC
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVS-----------GRLNDLWGFDVVDRKWI--QYPSAGENCK 172 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-----------~~~~~~~~~~~~~~~W~--~~~~~~~~~~ 172 (329)
..+++........ .......-.-+++.++++..... .....++.+++.+.... .+.... ..
T Consensus 158 ~~tg~~~~~~~~~----~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~--~~ 231 (710)
T 2xdw_A 158 VDGAKELPDVLER----VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP--DE 231 (710)
T ss_dssp TTTTEEEEEEEEE----ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT--TC
T ss_pred CCCCCCCcccccC----cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC--CC
Confidence 9998876543221 11111112225554445443322 22456889998876522 222221 11
Q ss_pred CCCCcEEEE-ECCEEEEEeeeCCC-CcccEEEEeCCC------C--ceEEeeccCCCCCCcceeEEEEECCEEEEEcCcc
Q 020245 173 GRGGPGLIV-TQGKIWVVYGFAGV-EVDDVHCFDPAH------A--QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEV 242 (329)
Q Consensus 173 ~~~~~~~~~-~~~~l~v~gG~~~~-~~~~~~~~d~~~------~--~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~ 242 (329)
......... -+++.+++....+. ...+++.+|..+ . .++.+.... ... ......-++.||+.....
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~---~~~-~~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF---EGE-YDYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS---SSC-EEEEEEETTEEEEEECTT
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC---CcE-EEEEeccCCEEEEEECCC
Confidence 222222332 34554444433222 247899999865 3 577776321 111 222223467888886532
Q ss_pred CCCCCCcCCCCeeeceeEEEEcCCc---eeEeecCCCCCCCCCCCC-CcceecccccCCcceEEEEcCCCCCCCcccceE
Q 020245 243 DPSDLGHLGAGKFAGELYSLDTETL---VWTRWDDGPGSDHHPGPR-GWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIY 318 (329)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~~~~p~~r-~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~ 318 (329)
.. ...++.+|+.+. .|+.+-. +... .. .+....++ +.+++....+. ...|+
T Consensus 308 ~~-----------~~~l~~~d~~~~~~~~~~~l~~-------~~~~~~~--~~~~~~~~-~~lv~~~~~~g----~~~l~ 362 (710)
T 2xdw_A 308 SP-----------NYRLINIDFTDPEESKWKVLVP-------EHEKDVL--EWVACVRS-NFLVLCYLHDV----KNTLQ 362 (710)
T ss_dssp CT-----------TCEEEEEETTSCCGGGCEEEEC-------CCSSCEE--EEEEEETT-TEEEEEEEETT----EEEEE
T ss_pred CC-----------CCEEEEEeCCCCCcccceeccC-------CCCCCeE--EEEEEEcC-CEEEEEEEECC----EEEEE
Confidence 11 247899998765 5888764 2222 22 22333323 44666554322 34677
Q ss_pred EEecc
Q 020245 319 FFTPC 323 (329)
Q Consensus 319 ~~~~~ 323 (329)
++++.
T Consensus 363 ~~~~~ 367 (710)
T 2xdw_A 363 LHDLA 367 (710)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 77763
No 155
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.18 E-value=1.9 Score=39.55 Aligned_cols=129 Identities=17% Similarity=0.140 Sum_probs=70.2
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeC-CCCc--EEEEeeCCC--CCCC---CcceeEEE--ECCE----EEEEc
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDL-ETLT--WSVADVTGD--VPPP---RVGVTMAA--VGHT----IYMFG 89 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~-~~~~--W~~~~~~~~--~p~~---r~~~~~~~--~~~~----iyv~G 89 (329)
.+-++.++.||+.... .+.++.+|. .+.+ |+.-..... .+.. ......+. .+++ ||+..
T Consensus 56 ~tP~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp SCCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred eccEEECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc
Confidence 4445679999998752 257999999 6554 765332110 0000 11122344 4666 87753
Q ss_pred cccCCCCCCCceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEec
Q 020245 90 GRDGTHKELNELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYP 165 (329)
Q Consensus 90 G~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~ 165 (329)
. ...++.+|..+. .|+.-..... +......+-++.++++|+-.+.........++.||..+.+ |+.-.
T Consensus 129 ~-------dg~l~AlDa~TG~~~W~~~~~~~~-~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 129 L-------DGNVAALNAETGETVWKVENSDIK-VGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECCCGG-GTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred C-------CCEEEEEECCCCCEEEeecCCCCC-ccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2 247999998876 4875322100 0001122234467887764332111233679999999874 87665
Q ss_pred CC
Q 020245 166 SA 167 (329)
Q Consensus 166 ~~ 167 (329)
..
T Consensus 201 ~~ 202 (599)
T 1w6s_A 201 TG 202 (599)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 156
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.17 E-value=0.83 Score=35.43 Aligned_cols=152 Identities=13% Similarity=0.146 Sum_probs=81.4
Q ss_pred eEEEECCEEEEEccccCCCCCCCceEEEECCCCcEE--Eccc-CCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeE
Q 020245 77 TMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWT--LLSN-GDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLW 152 (329)
Q Consensus 77 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~--~~~~-~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 152 (329)
+++.+.+++|+|=| +.+|+++.....+. .+.. .+..|... .++... .++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~i-DAa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD--------RFFWRLHPQQVDAELFLTKSFWPELPNRI-DAAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET--------TEEEEECSSSSCCEEEEHHHHCTTSCSSC-CEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCcCCCceehhHhccCCCCCc-cEEEEeccCCcEEEEcc-------CEEE
Confidence 44567899999955 34777776543332 2211 12224322 222222 2689999988 5677
Q ss_pred EEEcCCCe---EEEecCCCCCCC--CCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEE-----eec-cCCCC
Q 020245 153 GFDVVDRK---WIQYPSAGENCK--GRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ-----VET-SGEKP 220 (329)
Q Consensus 153 ~~~~~~~~---W~~~~~~~~~~~--~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~-----~~~-~~~~p 220 (329)
+|+..+.. -..+...+- |. ....++.... ++++|++-| +..|+||..+.+-.. +.. -..+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~Gl-P~~~~~IDAA~~~~~~gk~yfFkG------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGL-PKEVKKISAAVHFEDTGKTLLFSG------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTC-CTTCCCCCEEEECTTTSEEEEEET------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCC-CCCCccccEEEEeCCCCEEEEEeC------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 77533211 123333211 11 1223332222 479999987 689999986543210 000 00122
Q ss_pred CCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCcee
Q 020245 221 TARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVW 269 (329)
Q Consensus 221 ~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 269 (329)
..-.++...++.+|++-| +..|+||..+++=
T Consensus 165 --~~iDaAf~~~g~~YfFkg----------------~~y~rf~~~~~~v 195 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNG----------------PIQFEYSIWSNRI 195 (207)
T ss_dssp --SCCSEEEEETTEEEEEET----------------TEEEEEETTTTEE
T ss_pred --CCccEEEEcCCcEEEEEC----------------CEEEEEeCCccEE
Confidence 222344456889999977 4789999877643
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.15 E-value=1.2 Score=37.32 Aligned_cols=116 Identities=11% Similarity=0.087 Sum_probs=52.2
Q ss_pred EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCCCc
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRTNQ 110 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 110 (329)
..+++|.+.... ...-.++.+|..+.+.+.+... ....++ +.+..- +..||+.+... .....-.+|.+|..+.+
T Consensus 14 ~~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~-~~~~p~--~l~~spdg~~l~~~~~~~-~~~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 14 LTMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDA-EVANPS--YLIPSADGKFVYSVNEFS-KDQAAVSAFAFDKEKGT 88 (361)
T ss_dssp EEEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEE-ECSCCC--SEEECTTSSEEEEEECCS-STTCEEEEEEEETTTTE
T ss_pred eEEEEEeccCCC-CCCEEEEEEeCCCCCEEEeecc-cCCCCc--eEEECCCCCEEEEEEccC-CCCCcEEEEEEeCCCCc
Confidence 344456554322 1112455567788887766553 111121 122222 34577765431 11112234555666677
Q ss_pred EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 111 WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 111 W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
.+.+..... ....-..++.-++.+|+... .. ..+..|++.+.
T Consensus 89 ~~~~~~~~~--~~~~p~~~~~dg~~l~~~~~-~~----~~v~~~~~~~~ 130 (361)
T 3scy_A 89 LHLLNTQKT--MGADPCYLTTNGKNIVTANY-SG----GSITVFPIGQD 130 (361)
T ss_dssp EEEEEEEEC--SSSCEEEEEECSSEEEEEET-TT----TEEEEEEBCTT
T ss_pred EEEeeEecc--CCCCcEEEEECCCEEEEEEC-CC----CEEEEEEeCCC
Confidence 766654310 11111222233334555432 22 56788887643
No 158
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.09 E-value=1.5 Score=40.46 Aligned_cols=198 Identities=16% Similarity=-0.009 Sum_probs=103.4
Q ss_pred CceEEEeCCC------CcEEEEe-eCCCCCCCCcceeEEEECCEEEEEccccCCCC--CCCceEEEECC-CC---cEEEc
Q 020245 48 NNLHVFDLET------LTWSVAD-VTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHK--ELNELYSFDTR-TN---QWTLL 114 (329)
Q Consensus 48 ~~~~~~d~~~------~~W~~~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~~d~~-~~---~W~~~ 114 (329)
..++++|+.+ .+.+.+. .. ..........-+++.+++........ ....++.+|.. +. +...+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDA----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSC----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecC----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 5788888887 5555443 21 11111112222444333333221111 23579999998 56 44444
Q ss_pred ccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCC-CCCC---CcEEEEE-CCEEEEE
Q 020245 115 SNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENC-KGRG---GPGLIVT-QGKIWVV 189 (329)
Q Consensus 115 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~-~~~~---~~~~~~~-~~~l~v~ 189 (329)
... ...........-++++|+.+..+. ...++.+|+.+.++..+....... .+.. ....+.. ++++++.
T Consensus 237 ~~~---~~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 237 LGG---PEEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp EEE---TTBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred CCC---CCceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE
Confidence 321 011111122223677777665432 247899999888998877642110 0000 1223333 5677766
Q ss_pred eeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEE-EEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 190 YGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFST-VGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 190 gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~-~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
+.. ....++.+|..+.+.+.+... . .....+ ..-++.++++.+... ....+|.+|+++.+
T Consensus 311 ~~~---~~~~l~~~d~~~~~~~~l~~~----~-~~~~~~~s~~~~~~~~~~~~~~-----------~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 311 HGK---GAAVLGILDPESGELVDAAGP----W-TEWAATLTVSGTRAVGVAASPR-----------TAYEVVELDTVTGR 371 (662)
T ss_dssp EBS---SSCEEEEEETTTTEEEECCSS----C-CEEEEEEEEETTEEEEEEEETT-----------EEEEEEEEETTTCC
T ss_pred EEc---CccEEEEEECCCCcEEEecCC----C-CeEEEEEecCCCEEEEEEcCCC-----------CCCEEEEEECCCCc
Confidence 543 346888889887776665421 1 112222 334566666654321 14578999988887
Q ss_pred eEeecC
Q 020245 269 WTRWDD 274 (329)
Q Consensus 269 W~~~~~ 274 (329)
.+.+..
T Consensus 372 ~~~l~~ 377 (662)
T 3azo_A 372 ARTIGA 377 (662)
T ss_dssp EEEEES
T ss_pred eEEeec
Confidence 777653
No 159
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.02 E-value=1.2 Score=36.69 Aligned_cols=145 Identities=8% Similarity=-0.032 Sum_probs=73.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCc----EEEEeeCCCCCCCCcceeEEEECCE-EEEEccccCCCCCCCceEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLT----WSVADVTGDVPPPRVGVTMAAVGHT-IYMFGGRDGTHKELNELYSF 104 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~----W~~~~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~ 104 (329)
++.+++.|+.+ ..+..||..+.. ...+... ..........-+++ +++.|+.+ ..+..|
T Consensus 22 ~~~~l~~~~~d-------~~v~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d------g~i~~w 84 (342)
T 1yfq_A 22 SKSLLLITSWD-------GSLTVYKFDIQAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQ------GEILKV 84 (342)
T ss_dssp GGTEEEEEETT-------SEEEEEEEETTTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETT------SCEEEE
T ss_pred CCCEEEEEcCC-------CeEEEEEeCCCCccccceeeeec----CCceEEEEECCCCCcEEEEEcCC------CeEEEE
Confidence 44555666532 568888877665 3333221 11122222233566 66666644 478999
Q ss_pred EC-CCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC---e----EEEecCCCCCCCCCCC
Q 020245 105 DT-RTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR---K----WIQYPSAGENCKGRGG 176 (329)
Q Consensus 105 d~-~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~---~----W~~~~~~~~~~~~~~~ 176 (329)
|. .+.+...+... +....-.++....+.+++.|+.+ ..+..||+.+. . .+.+... .....-
T Consensus 85 d~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~v 153 (342)
T 1yfq_A 85 DLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNT---KVKNKI 153 (342)
T ss_dssp CSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSS---SSCCCE
T ss_pred EeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEE---eeCCce
Confidence 99 88776655541 01111122222225666666654 45777877640 0 1122222 122222
Q ss_pred cEEEEECCEEEEEeeeCCCCcccEEEEeCCC
Q 020245 177 PGLIVTQGKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 177 ~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
.++....+. +++++.+ ..+..||..+
T Consensus 154 ~~~~~~~~~-l~~~~~d----~~i~i~d~~~ 179 (342)
T 1yfq_A 154 FTMDTNSSR-LIVGMNN----SQVQWFRLPL 179 (342)
T ss_dssp EEEEECSSE-EEEEEST----TEEEEEESSC
T ss_pred EEEEecCCc-EEEEeCC----CeEEEEECCc
Confidence 333444555 5555543 5788899876
No 160
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.02 E-value=1.4 Score=37.26 Aligned_cols=146 Identities=8% Similarity=-0.018 Sum_probs=79.4
Q ss_pred EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC--CEEEEEccccCCCCCCCceEEEECCCC
Q 020245 32 KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG--HTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 32 ~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++++.|+.+ ..+..||..+.+........ .....-.++.... +.+++.|+.+ ..+..+|..+.
T Consensus 87 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG-------GDIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT-------SCEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC
T ss_pred CEEEEEcCC-------CeEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC
Confidence 577777642 57889999877765544311 1111222233333 3566666544 46888999877
Q ss_pred cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCE-EE
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGK-IW 187 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-l~ 187 (329)
....+...... ..........-++++++.|+.+ ..+..||+....-..+... ...-.+++.. ++. ++
T Consensus 152 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 152 VIQVFAKTDSW-DYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH-----KAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEEECCCCS-SCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS-----SSCEEEEEECSSCTTEE
T ss_pred ceEEEeccCCC-CCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC-----CCcEEEEEECCCCCCEE
Confidence 66655443210 0111122222356777777754 4788899865544444322 1122223332 344 77
Q ss_pred EEeeeCCCCcccEEEEeCCC
Q 020245 188 VVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 188 v~gG~~~~~~~~~~~~d~~~ 207 (329)
+.|+.+ ..+..||+.+
T Consensus 221 ~s~~~d----~~i~iwd~~~ 236 (383)
T 3ei3_B 221 ATSSVD----ATVKLWDLRN 236 (383)
T ss_dssp EEEETT----SEEEEEEGGG
T ss_pred EEEeCC----CEEEEEeCCC
Confidence 777654 4788888865
No 161
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.01 E-value=1.5 Score=37.59 Aligned_cols=206 Identities=13% Similarity=0.134 Sum_probs=107.3
Q ss_pred ceeEEeccCCCCCCCCcceeEEEE---CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCC--C-----cc
Q 020245 6 GTWIKLDQKGSGPGARSSHAITIV---GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPP--R-----VG 75 (329)
Q Consensus 6 ~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~--r-----~~ 75 (329)
.+|+.+... +....-++++.. ++.||+.+.... ....+++.+....+|+.+.....++.. + ..
T Consensus 43 ~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~----~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~ 115 (394)
T 3b7f_A 43 RTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGH----LGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVD 115 (394)
T ss_dssp CSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC------CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCC
T ss_pred CCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCC----CCccEEEeCCCCCCceECCccccCCCccccccccccc
Confidence 478877431 222334555554 457887653211 112588887778899988653212211 1 11
Q ss_pred e--eEEEE----CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCC--------------CcccceeEee---
Q 020245 76 V--TMAAV----GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPP--------------HRSYHSTAAD--- 132 (329)
Q Consensus 76 ~--~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~--------------~r~~~~~~~~--- 132 (329)
. +++.. .+.||+.+- ...+++.+-...+|+.+......|. ....+.+...
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~ 188 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRD 188 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTC
T ss_pred ceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCC
Confidence 1 22222 467777542 2358888777889998864211111 1122333332
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCC---CCC-----CCCCcEEEEEC---CEEEEEeeeCCCCcccEE
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGE---NCK-----GRGGPGLIVTQ---GKIWVVYGFAGVEVDDVH 201 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~---~~~-----~~~~~~~~~~~---~~l~v~gG~~~~~~~~~~ 201 (329)
.+.||+.... ..+++.+....+|+.+..... .|. ....++++... +.+|+-. . ..++
T Consensus 189 ~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~-----~gl~ 256 (394)
T 3b7f_A 189 PKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-H-----CGIY 256 (394)
T ss_dssp TTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-T-----TEEE
T ss_pred CCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-C-----CeEE
Confidence 3567775432 247777777889998864211 011 11123333332 5566632 2 4588
Q ss_pred EEeCCCCceEEeeccCCCCCC--cceeEEEEE---CCEEEEEc
Q 020245 202 CFDPAHAQWAQVETSGEKPTA--RSVFSTVGI---GKHIVVYG 239 (329)
Q Consensus 202 ~~d~~~~~w~~~~~~~~~p~~--r~~~~~~~~---~~~i~i~G 239 (329)
+.+....+|+.+.. .+|.. ...+.++.. .+.||+..
T Consensus 257 ~s~D~G~tW~~~~~--~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 257 RMDRREGVWKRIGD--AMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEETTTTEEECGGG--GSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred EeCCCCCcceECCC--CCCCCCccceEEEEECCCCCCEEEEEe
Confidence 88888899998864 23331 233333332 34677753
No 162
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.00 E-value=1.4 Score=37.28 Aligned_cols=70 Identities=4% Similarity=-0.030 Sum_probs=36.2
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCC---CCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCK---GRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~---~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
++ +++.|+.+ ..+..||+.+.+-...-.... .. ...-.+++.. ++.+++.++.+ .....+..||..+.
T Consensus 197 ~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~-~h~~~~~~i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNN-----GTVQISELSTLRPLYNFESQH-SMINNSNSIRSVKFSPQGSLLAIAHDS-NSFGCITLYETEFG 268 (397)
T ss_dssp TS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC----CCCCCEEEEEECSSTTEEEEEEEE-TTEEEEEEEETTTC
T ss_pred Cc-eEEEEeCC-----CcEEEEECCCCceeEEEeccc-cccccCCccceEEECCCCCEEEEEecC-CCCceEEEEECCCC
Confidence 45 66666643 468899998876433322100 01 1122222322 46666666643 01137888998765
Q ss_pred ce
Q 020245 209 QW 210 (329)
Q Consensus 209 ~w 210 (329)
+-
T Consensus 269 ~~ 270 (397)
T 1sq9_A 269 ER 270 (397)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 163
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.96 E-value=1.5 Score=37.19 Aligned_cols=155 Identities=10% Similarity=-0.055 Sum_probs=76.0
Q ss_pred eCCeEEEE-cccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 132 DDRHVYIF-GGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 132 ~~~~i~v~-GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
-++++.++ +|... ..+..+|+.+.+-...... ... -.+++. -++++++.++. +.+.+++..+..
T Consensus 143 pDg~~la~as~~~d----~~i~iwd~~~~~~~~~~~~----~~~-V~~v~fspdg~~l~s~s~-----~~~~~~~~~~~~ 208 (365)
T 4h5i_A 143 REGTVAAIASSKVP----AIMRIIDPSDLTEKFEIET----RGE-VKDLHFSTDGKVVAYITG-----SSLEVISTVTGS 208 (365)
T ss_dssp TTSSCEEEEESCSS----CEEEEEETTTTEEEEEEEC----SSC-CCEEEECTTSSEEEEECS-----SCEEEEETTTCC
T ss_pred CCCCEEEEEECCCC----CEEEEeECCCCcEEEEeCC----CCc-eEEEEEccCCceEEeccc-----eeEEEEEeccCc
Confidence 35665554 34222 5688899998875544322 111 223333 35666666542 456777776665
Q ss_pred eEEeeccCCCCCCcceeEE--EEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCc
Q 020245 210 WAQVETSGEKPTARSVFST--VGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGW 287 (329)
Q Consensus 210 w~~~~~~~~~p~~r~~~~~--~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~ 287 (329)
........ ........ ..-++..++.++.+... ...++.+|........... .........-
T Consensus 209 ~~~~~~~~---~~~~~v~~v~fspdg~~l~~~s~d~~~----------~~~i~~~~~~~~~~~~~~~---~~~~~~~~~V 272 (365)
T 4h5i_A 209 CIARKTDF---DKNWSLSKINFIADDTVLIAASLKKGK----------GIVLTKISIKSGNTSVLRS---KQVTNRFKGI 272 (365)
T ss_dssp EEEEECCC---CTTEEEEEEEEEETTEEEEEEEESSSC----------CEEEEEEEEETTEEEEEEE---EEEESSCSCE
T ss_pred ceeeeecC---CCCCCEEEEEEcCCCCEEEEEecCCcc----------eeEEeecccccceecceee---eeecCCCCCe
Confidence 44332211 11111222 23367777777643221 1246677776665543321 0000111111
Q ss_pred ceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 288 CAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 288 ~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
.+++.-.+ +.+++.|+.+. .|.+||.++.
T Consensus 273 --~~~~~Spd-g~~lasgs~D~------~V~iwd~~~~ 301 (365)
T 4h5i_A 273 --TSMDVDMK-GELAVLASNDN------SIALVKLKDL 301 (365)
T ss_dssp --EEEEECTT-SCEEEEEETTS------CEEEEETTTT
T ss_pred --EeEEECCC-CCceEEEcCCC------EEEEEECCCC
Confidence 23333333 55888888764 4677776653
No 164
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.92 E-value=2.1 Score=38.88 Aligned_cols=191 Identities=10% Similarity=-0.056 Sum_probs=95.5
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.+|+.... .+.+.++|+.+.+-......+ ..-|.++.. +..+|+.+. ...+..||+.
T Consensus 166 ~~~~~V~~~~-------~~~V~viD~~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRD-------AGQIALIDGSTYEIKTVLDTG-----YAVHISRLSASGRYLFVIGR-------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETT-------TTEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEET-------TSEEEEEETT
T ss_pred CceEEEEeCC-------CCeEEEEECCCCeEEEEEeCC-----CCccceEECCCCCEEEEEcC-------CCeEEEEECC
Confidence 4577776642 278999999987654322221 122333322 456887642 2479999995
Q ss_pred --CCcE-EEcccCCCCCCCcccceeEe----eCC-eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCC--------C
Q 020245 108 --TNQW-TLLSNGDAGPPHRSYHSTAA----DDR-HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGEN--------C 171 (329)
Q Consensus 108 --~~~W-~~~~~~~~~p~~r~~~~~~~----~~~-~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~--------~ 171 (329)
+.+- ..+.. + ..+| +..+. -++ .+|+..- .. +.+.++|..+.+-.+.-+.... |
T Consensus 227 ~~t~~~v~~i~~-G--~~P~--~ia~s~~~~pDGk~l~v~n~-~~----~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p 296 (567)
T 1qks_A 227 MKEPTTVAEIKI-G--SEAR--SIETSKMEGWEDKYAIAGAY-WP----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHP 296 (567)
T ss_dssp SSSCCEEEEEEC-C--SEEE--EEEECCSTTCTTTEEEEEEE-ET----TEEEEEETTTCCEEEEEECCEECTTTCCEES
T ss_pred CCCCcEeEEEec-C--CCCc--eeEEccccCCCCCEEEEEEc-cC----CeEEEEECCCCcEEEEEeccccccccccccC
Confidence 4432 22222 1 1222 33333 144 5655532 22 5678889887654433222100 1
Q ss_pred CCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CC-EEEEEcCccCCCCCCc
Q 020245 172 KGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GK-HIVVYGGEVDPSDLGH 249 (329)
Q Consensus 172 ~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~-~i~i~GG~~~~~~~~~ 249 (329)
.+|........++..+++.- .....++..|....+...+.. .+..+..|....- ++ .+|+.-..
T Consensus 297 ~~rva~i~~s~~~~~~vv~~---~~~g~v~~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~~-------- 362 (567)
T 1qks_A 297 EPRVAAILASHYRPEFIVNV---KETGKILLVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAANA-------- 362 (567)
T ss_dssp CCCEEEEEECSSSSEEEEEE---TTTTEEEEEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEGG--------
T ss_pred CCceEEEEEcCCCCEEEEEe---cCCCeEEEEecCCCccceeee---eeccccccCceECCCCCEEEEEeCC--------
Confidence 11222211222333333321 123678888887665444442 2244555544333 33 44444321
Q ss_pred CCCCeeeceeEEEEcCCcee
Q 020245 250 LGAGKFAGELYSLDTETLVW 269 (329)
Q Consensus 250 ~~~~~~~~~~~~~d~~~~~W 269 (329)
.+.|..+|.++.+-
T Consensus 363 ------sn~V~ViD~~t~kl 376 (567)
T 1qks_A 363 ------RNKLVVIDTKEGKL 376 (567)
T ss_dssp ------GTEEEEEETTTTEE
T ss_pred ------CCeEEEEECCCCcE
Confidence 46789999998754
No 165
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.89 E-value=1.4 Score=36.65 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=55.0
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE---CCEEEEEccccCCCCCCCceEEEECC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV---GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
+.+++.|+.+ ..+..||..+.+-..... . .. ..-.++.+ ++.+++.|+.+ ..+..||..
T Consensus 85 ~~~l~~~~~d-------g~i~v~d~~~~~~~~~~~-~---~~-~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~ 146 (366)
T 3k26_A 85 HPLLAVAGSR-------GIIRIINPITMQCIKHYV-G---HG-NAINELKFHPRDPNLLLSVSKD------HALRLWNIQ 146 (366)
T ss_dssp CEEEEEEETT-------CEEEEECTTTCCEEEEEE-S---CC-SCEEEEEECSSCTTEEEEEETT------SCEEEEETT
T ss_pred CCEEEEecCC-------CEEEEEEchhceEeeeec-C---CC-CcEEEEEECCCCCCEEEEEeCC------CeEEEEEee
Confidence 4677777643 578899988665432221 0 11 11222223 45677777654 468899998
Q ss_pred CCcEEEcc-cCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 108 TNQWTLLS-NGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 108 ~~~W~~~~-~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
+.+-...- ... .....-.++.. -++..++.|+.+ ..+..||+.+.
T Consensus 147 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 193 (366)
T 3k26_A 147 TDTLVAIFGGVE--GHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSK 193 (366)
T ss_dssp TTEEEEEECSTT--SCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSH
T ss_pred cCeEEEEecccc--cccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCC
Confidence 76543322 111 11111112222 255667777754 46788888765
No 166
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.89 E-value=1.4 Score=36.62 Aligned_cols=158 Identities=11% Similarity=0.173 Sum_probs=74.1
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEEC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
..+ +++.|+.+ ..+..||........+...... .....-..+.+ ++.+++.|+.+ ..+..||.
T Consensus 23 s~~-~las~~~D-------~~i~lw~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~las~s~D------~~v~iw~~ 87 (330)
T 2hes_X 23 SQG-ILATGSTD-------RKIKLVSVKYDDFTLIDVLDET-AHKKAIRSVAWRPHTSLLAAGSFD------STVSIWAK 87 (330)
T ss_dssp ETT-EEEEEESS-------SCEEEEECSSSCCEEEEEECTT-CCCSCEEEEEECTTSSEEEEEETT------SCEEEEEC
T ss_pred CCC-EEEEEcCC-------CEEEEEEecCCCeEEEEEEecC-CccCCEEEEEECCCCCEEEEEeCC------CcEEEEEc
Confidence 344 55556532 5688899887655444332100 01111222333 45666777655 35677776
Q ss_pred CCC-----cEEEcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCC--CeEEEecCCCCCCCCCCCcE
Q 020245 107 RTN-----QWTLLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVD--RKWIQYPSAGENCKGRGGPG 178 (329)
Q Consensus 107 ~~~-----~W~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~--~~W~~~~~~~~~~~~~~~~~ 178 (329)
... .+..+.... .+...-.++. .-++++++.|+.+ ..+..||+.+ ..++.+..+. .....-.+
T Consensus 88 ~~~~~~~~~~~~~~~~~--~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~--~h~~~v~~ 158 (330)
T 2hes_X 88 EESADRTFEMDLLAIIE--GHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQ--EHSQDVKH 158 (330)
T ss_dssp -------CCCEEEEEEC------CEEEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEEC--CCSSCEEE
T ss_pred ccCcCccccceeEEEEc--CCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEec--cCCCceEE
Confidence 432 222222221 0111111111 2256777777755 4578888743 2344433331 11111122
Q ss_pred EEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEee
Q 020245 179 LIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVE 214 (329)
Q Consensus 179 ~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~ 214 (329)
+.. .++.+++.|+.+ ..+..+|..+..|+.+.
T Consensus 159 v~~~p~~~~l~s~s~D----~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 159 VIWHPSEALLASSSYD----DTVRIWKDYDDDWECVA 191 (330)
T ss_dssp EEECSSSSEEEEEETT----SCEEEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEEcCC----CeEEEEECCCCCeeEEE
Confidence 222 246677777765 45667777666666554
No 167
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.87 E-value=1.4 Score=36.61 Aligned_cols=145 Identities=14% Similarity=0.046 Sum_probs=78.7
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCc
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQ 110 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 110 (329)
+.+|+++... ..+++||+.+.+.+.+.. +. ........-++++++.. ...+++||+.+.+
T Consensus 61 ~~l~~~d~~~-------~~i~~~d~~~~~~~~~~~----~~-~v~~i~~~~dg~l~v~~--------~~gl~~~d~~~g~ 120 (326)
T 2ghs_A 61 GTAWWFNILE-------RELHELHLASGRKTVHAL----PF-MGSALAKISDSKQLIAS--------DDGLFLRDTATGV 120 (326)
T ss_dssp TEEEEEEGGG-------TEEEEEETTTTEEEEEEC----SS-CEEEEEEEETTEEEEEE--------TTEEEEEETTTCC
T ss_pred CEEEEEECCC-------CEEEEEECCCCcEEEEEC----CC-cceEEEEeCCCeEEEEE--------CCCEEEEECCCCc
Confidence 5788876432 579999999876655432 11 12222233467887753 1359999999888
Q ss_pred EEEcccCCC-CCCCcccceeEeeCCeEEEEcccC-CCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CC-EE
Q 020245 111 WTLLSNGDA-GPPHRSYHSTAADDRHVYIFGGCG-VSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QG-KI 186 (329)
Q Consensus 111 W~~~~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~-~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~l 186 (329)
.+.+..... .+..+.....+.-++++|+..... .......+++++ +.+...+.... . .....+.. ++ .+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~----~-~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI----S-IPNSICFSPDGTTG 193 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE----S-SEEEEEECTTSCEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC----c-ccCCeEEcCCCCEE
Confidence 877654321 111222333333467877643211 112345788888 56665543211 1 11223333 34 47
Q ss_pred EEEeeeCCCCcccEEEEeCC
Q 020245 187 WVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~ 206 (329)
|+.... ...+++|+.+
T Consensus 194 yv~~~~----~~~I~~~d~~ 209 (326)
T 2ghs_A 194 YFVDTK----VNRLMRVPLD 209 (326)
T ss_dssp EEEETT----TCEEEEEEBC
T ss_pred EEEECC----CCEEEEEEcc
Confidence 776432 2578999875
No 168
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.86 E-value=1.7 Score=37.47 Aligned_cols=212 Identities=10% Similarity=0.032 Sum_probs=94.2
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..+..||..+.+-.. ... .......+...++.+++.|+.+ ..+..+|............+ .......
T Consensus 169 g~v~iWd~~~~~~~~--~~~---~h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~--h~~~~~~ 235 (420)
T 4gga_A 169 AEVQLWDVQQQKRLR--NMT---SHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSG--HSQEVCG 235 (420)
T ss_dssp SCEEEEETTTTEEEE--EEC---CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC--CSSCEEE
T ss_pred CeEEEEEcCCCcEEE--EEe---CCCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEecc--cccceee
Confidence 457778877654322 211 1222233445566666766654 45677776654322211111 0111111
Q ss_pred eeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE--EEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEE
Q 020245 128 STAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW--IQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCF 203 (329)
Q Consensus 128 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W--~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~ 203 (329)
.....++..++.|+.+ ..+..++..+.+- ..+.... .....-.+.+.. +..++++++...+ ..+..|
T Consensus 236 ~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~--~~~~~V~~~~~~p~~~~~la~~~gs~D--~~I~iw 306 (420)
T 4gga_A 236 LRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFT--QHQGAVKAVAWCPWQSNVLATGGGTSD--RHIRIW 306 (420)
T ss_dssp EEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEEC--CCSSCEEEEEECTTCTTEEEEEECTTT--CEEEEE
T ss_pred eeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeec--ccCCceeeeeeCCCcccEEEEEeecCC--CEEEEE
Confidence 2222355666666654 3466677665431 1111110 011111122222 3445555443222 467788
Q ss_pred eCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCC
Q 020245 204 DPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHH 281 (329)
Q Consensus 204 d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~ 281 (329)
|..+.+-...... .....+++.. ++.+++..|..+ ..|.++|..+.+ .+.... -
T Consensus 307 d~~t~~~~~~~~~-----~~~v~~~~~~~~~~~lv~~sg~~d-------------~~I~iwd~~~~~--~v~~l~----g 362 (420)
T 4gga_A 307 NVCSGACLSAVDA-----HSQVCSILWSPHYKELISGHGFAQ-------------NQLVIWKYPTMA--KVAELK----G 362 (420)
T ss_dssp ETTTTEEEEEEEC-----SSCEEEEEEETTTTEEEEEECTTT-------------CCEEEEETTTCC--EEEEEC----C
T ss_pred eCCccccceeecc-----ccceeeeeecCCCCeEEEEEecCC-------------CEEEEEECCCCc--EEEEEc----C
Confidence 9877655443321 1112222222 446666656422 357888876543 333200 0
Q ss_pred CCCCCcceecccccCCcceEEEEcCCCC
Q 020245 282 PGPRGWCAFAGGLRGGKHGLLVYGGNSP 309 (329)
Q Consensus 282 p~~r~~~~~~~~~~~~~~~i~i~GG~~~ 309 (329)
...+. .+++...+ +.+++.||.+.
T Consensus 363 H~~~V---~~l~~spd-g~~l~S~s~D~ 386 (420)
T 4gga_A 363 HTSRV---LSLTMSPD-GATVASAAADE 386 (420)
T ss_dssp CSSCE---EEEEECTT-SSCEEEEETTT
T ss_pred CCCCE---EEEEEcCC-CCEEEEEecCC
Confidence 12222 23333333 45788888764
No 169
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.84 E-value=1.4 Score=36.33 Aligned_cols=111 Identities=6% Similarity=-0.063 Sum_probs=60.1
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCC-eEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDR-HVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
.+.+|+..... ..+..||+.+++....-..+ .... .....-++ .+|+.+... ..++.+|+.+.+
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFSTDTLEILNQITLG---YDFV-DTAITSDCSNVVVTSDFC-----QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEETTTCCEEEEEECC---CCEE-EEEECSSSCEEEEEESTT-----CEEEEEECSSSS
T ss_pred CCEEEEEecCC------CeEEEEeCcccceeeeEEcc---CCcc-eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCc
Confidence 45778876544 58999999988876554432 1111 22222344 466665422 478999998887
Q ss_pred E-EEecCCCCCCCCCCCcEEEE-ECCE-EEEEeeeCCCCcccEEEEeCCCCceEEe
Q 020245 161 W-IQYPSAGENCKGRGGPGLIV-TQGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQV 213 (329)
Q Consensus 161 W-~~~~~~~~~~~~~~~~~~~~-~~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~ 213 (329)
. ....... ....++++. -+++ +| ... .+.....+..+|..+.+....
T Consensus 74 ~~~~~~~~~----~~~~~~~~~s~dg~~l~-~~~-~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 74 PKVVAIQEG----QSSMADVDITPDDQFAV-TVT-GLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp CEEEEEEEC----SSCCCCEEECTTSSEEE-ECC-CSSSSCEEEEEETTTTEEEEE
T ss_pred eeEEecccC----CCCccceEECCCCCEEE-Eec-CCCCcccEEEEECCCCCeEEE
Confidence 4 2222221 112221233 3344 55 332 111112799999987765544
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.75 E-value=2.7 Score=39.17 Aligned_cols=221 Identities=11% Similarity=0.026 Sum_probs=108.4
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCC-cceeEEEE--CCEEEEEccccCCCCCCCceEEEE
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPR-VGVTMAAV--GHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
.++++|.+--... . ....+|+.+.....|+.+.....+.... .......+ +++.+++.-.. .......++++|
T Consensus 78 dG~~~~~~~~~~~--~-~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-~G~~~~~i~v~d 153 (695)
T 2bkl_A 78 RNGRFFYVRTHKD--K-EKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-NAADEAVLHVID 153 (695)
T ss_dssp ETTEEEEEEECTT--C-SSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-TTCSCCEEEEEE
T ss_pred ECCEEEEEEEcCC--C-eEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-CCCceEEEEEEE
Confidence 3556666542211 1 1256788888778888776532111111 11112222 45554543322 222345799999
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCC--------cCcceeEEEEcCCCeE--EEecCCCCCCCCCC
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVS--------GRLNDLWGFDVVDRKW--IQYPSAGENCKGRG 175 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--------~~~~~~~~~~~~~~~W--~~~~~~~~~~~~~~ 175 (329)
..+++....... +........-.-+++.+++...+.. .....++.+++.+..- ..+.... .....
T Consensus 154 l~tg~~~~~~~~---~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~--~~~~~ 228 (695)
T 2bkl_A 154 VDSGEWSKVDVI---EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT--GDPTT 228 (695)
T ss_dssp TTTCCBCSSCCB---SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC--CCTTC
T ss_pred CCCCCCcCCccc---CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC--CCCEE
Confidence 998875311111 1111122222236666666654432 2345689999887652 2232221 11122
Q ss_pred CcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCe
Q 020245 176 GPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGK 254 (329)
Q Consensus 176 ~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~ 254 (329)
...... -+++.+++....+....+++.++..+..++.+.... ... ...+..++.+|+......
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~---~~~--~~~~~~~g~l~~~s~~~~----------- 292 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV---GAK--YEVHAWKDRFYVLTDEGA----------- 292 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS---SCC--EEEEEETTEEEEEECTTC-----------
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC---Cce--EEEEecCCcEEEEECCCC-----------
Confidence 222232 345544444333213457888887777888876422 111 222224556555533211
Q ss_pred eeceeEEEEcCCce---eEeecC
Q 020245 255 FAGELYSLDTETLV---WTRWDD 274 (329)
Q Consensus 255 ~~~~~~~~d~~~~~---W~~~~~ 274 (329)
....++.+|+++.. |+.+-.
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEEC
T ss_pred CCCEEEEEeCCCCCccCCeEEec
Confidence 12478999987654 877764
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.74 E-value=1.7 Score=36.79 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=59.5
Q ss_pred CCCceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCC-CcCcceeEEEEcCCCeEEEecCCCCCCCCC
Q 020245 97 ELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGV-SGRLNDLWGFDVVDRKWIQYPSAGENCKGR 174 (329)
Q Consensus 97 ~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 174 (329)
....++.+|+.+.+-+.+.... ....+....- +++.+++..... ......++.+|..+.....+.... ...
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~---~~~ 238 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQEN----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA---EGE 238 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC---TTE
T ss_pred CcceEEEEECCCCceEEeecCC----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC---CCc
Confidence 3467999999988766665431 1223333333 455444433221 122458899998887766665431 111
Q ss_pred CCcEEEE-ECCE-EEEEeeeCCCCcccEEEEeCCCCceEEeec
Q 020245 175 GGPGLIV-TQGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQVET 215 (329)
Q Consensus 175 ~~~~~~~-~~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~ 215 (329)
....... -+++ |+.+....+.....++.+|+++.+-+.+..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTS 281 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEc
Confidence 1111122 2555 444433222222359999999888766653
No 172
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.74 E-value=1.9 Score=37.35 Aligned_cols=245 Identities=9% Similarity=0.019 Sum_probs=123.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
+++||+.... .+.+.++|+.+..-..+..... .++ .+....++.||+..... ...++++|..+.
T Consensus 141 ~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~~~--~~~--ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRD-------DPRVRLISVDDNKVTTVHPGFK--GGK--PAVTKDKQRVYSIGWEG-----THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTTEEEEEEETCC--BCB--CEECTTSSEEEEEBSST-----TCEEEEEEGGGT
T ss_pred CCCEEEEecC-------CCcEEEEECCCCEEEEeeccCC--CCc--eeEecCCCcEEEEecCC-----CceEEEEEcCCC
Confidence 5689988752 2679999999877666654321 111 11111234677764322 127999998754
Q ss_pred c-EEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC-c-EEEEE--C
Q 020245 110 Q-WTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG-P-GLIVT--Q 183 (329)
Q Consensus 110 ~-W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~-~~~~~--~ 183 (329)
. ...+.........+....++.- ++.||+.-. ...+++||+.+.....+............ . .++.. +
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTT
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCC
Confidence 3 2333211100011222222223 678998422 24799999998875555221111111122 1 44444 5
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCC----------CcceeEEEEE-CCEEEEEcC-ccCCCCCCcCC
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPT----------ARSVFSTVGI-GKHIVVYGG-EVDPSDLGHLG 251 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~----------~r~~~~~~~~-~~~i~i~GG-~~~~~~~~~~~ 251 (329)
+.||+.... .+.+++|+.+.. ...+......+. -....+++.- ++.||+... .
T Consensus 279 g~lyv~d~~----~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~---------- 343 (409)
T 3hrp_A 279 SNFYMSDQN----LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK---------- 343 (409)
T ss_dssp TEEEEEETT----TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT----------
T ss_pred CEEEEEeCC----CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC----------
Confidence 789987532 268999988654 333321110000 0112233333 457888853 2
Q ss_pred CCeeeceeEEEEcCCceeEeecCC-C----CCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEec
Q 020245 252 AGKFAGELYSLDTETLVWTRWDDG-P----GSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTP 322 (329)
Q Consensus 252 ~~~~~~~~~~~d~~~~~W~~~~~~-~----~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~ 322 (329)
...|.++|+.+..-..+... . ..+.....+...-.++++..+ +.|||....+ +.|.++++
T Consensus 344 ----~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n------~~Ir~i~~ 408 (409)
T 3hrp_A 344 ----GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWG------KAIRKYAV 408 (409)
T ss_dssp ----TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTT------CEEEEEEE
T ss_pred ----CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCC------CeEEEEEe
Confidence 24788999666665555431 0 000011122222345555554 6688876533 35666655
No 173
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.72 E-value=1.8 Score=37.01 Aligned_cols=147 Identities=15% Similarity=0.133 Sum_probs=72.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++++++.|+.+ ..+..||..+.+-..... . ....-.++... ++..++.|+.+ ..+..||..+
T Consensus 134 dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~-~---h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED-------RLIRIWDIENRKIVMILQ-G---HEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEEC-C---CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEEEc-c---CCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCC
Confidence 55666666642 578899988765432211 1 11111122222 34455566544 4688889888
Q ss_pred CcEEEcccCCCCCCCcccceeEe-e-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCC-CC--CCCCCCcEEEE-E
Q 020245 109 NQWTLLSNGDAGPPHRSYHSTAA-D-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAG-EN--CKGRGGPGLIV-T 182 (329)
Q Consensus 109 ~~W~~~~~~~~~p~~r~~~~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~-~~--~~~~~~~~~~~-~ 182 (329)
.+....-... . . -.++.. - ++++++.|+.+ ..+..||..+..-....... .. .....-.+++. .
T Consensus 197 ~~~~~~~~~~---~-~-v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 266 (393)
T 1erj_A 197 GQCSLTLSIE---D-G-VTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 266 (393)
T ss_dssp TEEEEEEECS---S-C-EEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT
T ss_pred CeeEEEEEcC---C-C-cEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC
Confidence 7644322221 1 1 112222 2 56777887765 45888898877543322111 00 01111122222 2
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCC
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
+++.++.|+.+ ..+..||..+
T Consensus 267 ~g~~l~s~s~d----~~v~~wd~~~ 287 (393)
T 1erj_A 267 DGQSVVSGSLD----RSVKLWNLQN 287 (393)
T ss_dssp TSSEEEEEETT----SEEEEEEC--
T ss_pred CCCEEEEEeCC----CEEEEEECCC
Confidence 56677777655 4677777654
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.72 E-value=1.5 Score=37.14 Aligned_cols=159 Identities=13% Similarity=0.027 Sum_probs=77.0
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCC-cc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPH-RS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~-r~ 125 (329)
..++.+|+.+.+-+.+.... ....+....- +++.+++............++.+|..+...+.+.... .. ..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~---~~~~~ 240 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA---EGESC 240 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC---TTEEE
T ss_pred ceEEEEECCCCceEEeecCC----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC---CCccc
Confidence 57889999888766655421 2222222222 3443333322212233568999999877766665431 11 11
Q ss_pred cceeEeeCCe-EEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCC---CCCCCcEEEEECCE-EEEEe----eeCCCC
Q 020245 126 YHSTAADDRH-VYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENC---KGRGGPGLIVTQGK-IWVVY----GFAGVE 196 (329)
Q Consensus 126 ~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~---~~~~~~~~~~~~~~-l~v~g----G~~~~~ 196 (329)
.+....-+++ |+..... .......++.+|+.+.+-+.+...+... ...... ...-+++ |++.. |+....
T Consensus 241 ~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYL-KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGS-LMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-EEEEEECCC------------CC
T ss_pred ccceECCCCCEEEEEecC-CCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCC-eEccCCCcceeEeeeccccccCC
Confidence 1122223554 5443322 1212235999999998877665542100 000111 1222333 33221 011112
Q ss_pred cccEEEEeCCCCceEEeec
Q 020245 197 VDDVHCFDPAHAQWAQVET 215 (329)
Q Consensus 197 ~~~~~~~d~~~~~w~~~~~ 215 (329)
...++.+|+++.+-+.+..
T Consensus 319 ~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp CCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeccCCceEEecc
Confidence 3589999998888777664
No 175
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.67 E-value=1.8 Score=36.80 Aligned_cols=185 Identities=14% Similarity=0.104 Sum_probs=88.7
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccc-eeEe---eCCeEEEEcccCCCcCcceeEEEEcCCC--eEEEecCCCCCCC
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYH-STAA---DDRHVYIFGGCGVSGRLNDLWGFDVVDR--KWIQYPSAGENCK 172 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~-~~~~---~~~~i~v~GG~~~~~~~~~~~~~~~~~~--~W~~~~~~~~~~~ 172 (329)
..+..||..+.+-...-.... +...... ..+. .++.+++.|+.+ ..+..||+... .-..+.. .
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~-----h 248 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEF-PSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSRAVRTYHG-----H 248 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCS-SSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCCCCEEECC-----C
T ss_pred CcEEEEEcCCCcEEEEeeccc-CCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCcceEEECC-----c
Confidence 468888988775433221110 1111111 1111 266788888865 35788887632 1111211 1
Q ss_pred CCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCC----CCcceeEEEEECCEEEEEcCccCCCCC
Q 020245 173 GRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKP----TARSVFSTVGIGKHIVVYGGEVDPSDL 247 (329)
Q Consensus 173 ~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p----~~r~~~~~~~~~~~i~i~GG~~~~~~~ 247 (329)
...-.+++. .++..++.|+.+ ..+..||..+.+-...-...... .+.....+...++.+++.|+.+
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----- 319 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDD----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----- 319 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSS----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----
T ss_pred CCCeEEEEEecCCCeEEEEcCC----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----
Confidence 111222333 356677777765 46788888776543332111000 0111112222356777777642
Q ss_pred CcCCCCeeeceeEEEEcCCceeE-eecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecccC
Q 020245 248 GHLGAGKFAGELYSLDTETLVWT-RWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 248 ~~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~~ 325 (329)
..+.++|.....-. .+.. .......+. .+++...+ +.+++.|+.+. .|.+++++..
T Consensus 320 ---------g~i~vwd~~~~~~~~~~~~---~~~~h~~~v---~~l~~s~d-g~~l~sgs~D~------~i~iW~~~~~ 376 (380)
T 3iz6_a 320 ---------GDCYVWDTLLAEMVLNLGT---LQNSHEGRI---SCLGLSSD-GSALCTGSWDK------NLKIWAFSGH 376 (380)
T ss_dssp ---------SCEEEEETTTCCEEEEECC---SCSSCCCCC---CEEEECSS-SSEEEEECTTS------CEEEEECCSS
T ss_pred ---------CCEEEEECCCCceEEEEec---ccCCCCCce---EEEEECCC-CCEEEEeeCCC------CEEEEecCCC
Confidence 46888998665432 2221 000011122 23333333 55888898764 4566666543
No 176
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.66 E-value=1.5 Score=35.96 Aligned_cols=116 Identities=17% Similarity=0.092 Sum_probs=58.3
Q ss_pred CC-EEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCC--CCcceeEEEE--CCEEEEEccccC--CCC---CCC
Q 020245 30 GQ-KVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPP--PRVGVTMAAV--GHTIYMFGGRDG--THK---ELN 99 (329)
Q Consensus 30 ~~-~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~--~r~~~~~~~~--~~~iyv~GG~~~--~~~---~~~ 99 (329)
++ .+|+.+.. ...++++|+.+.+-........ +. ...-..++.. ++.+|+...... ... ...
T Consensus 44 dg~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T 1pby_B 44 GGRIAYATVNK-------SESLVKIDLVTGETLGRIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp TSSEEEEEETT-------TTEEEEEETTTCCEEEEEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred CCCEEEEEeCC-------CCeEEEEECCCCCeEeeEEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCc
Confidence 44 67776642 2579999998776543222110 00 0011122222 346777642100 011 246
Q ss_pred ceEEEECCCCcEEEcccCCCCCCCcccceeEeeCC-eEEEEcccCCCcCcceeEEEEcCCCeEEEec
Q 020245 100 ELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDR-HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYP 165 (329)
Q Consensus 100 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~ 165 (329)
.+..||..+.+....-..+. . .......-++ .+|+.. ..+..+|+.+.+-....
T Consensus 116 ~i~v~d~~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 116 RVALYDAETLSRRKAFEAPR--Q--ITMLAWARDGSKLYGLG--------RDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp EEEEEETTTTEEEEEEECCS--S--CCCEEECTTSSCEEEES--------SSEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCcEEEEEeCCC--C--cceeEECCCCCEEEEeC--------CeEEEEECCCCcEeeee
Confidence 89999998876543322221 1 1112222244 466652 46899999988755443
No 177
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.64 E-value=1.5 Score=35.85 Aligned_cols=188 Identities=13% Similarity=0.036 Sum_probs=88.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEE-EeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSV-ADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+..||..+.+-.. +.. ....-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 66 ~~~~l~s~s~d-------~~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~ 127 (304)
T 2ynn_A 66 RKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEA-----HPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWE 127 (304)
T ss_dssp GGTEEEEEETT-------SEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETT------SCEEEEEGG
T ss_pred CCCEEEEECCC-------CEEEEEECCCCcEEEEEeC-----CCCcEEEEEEcCCCCEEEEECCC------CeEEEEECC
Confidence 44555555532 568889988765322 221 11111122222 34566666655 467788876
Q ss_pred CCcEEEcccCCCCCCCcccceeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE---
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--- 182 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--- 182 (329)
+.. ....... .....-.++... ++.+++.|+.+ ..+..||+.+.+-...... ............
T Consensus 128 ~~~-~~~~~~~--~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 196 (304)
T 2ynn_A 128 NNW-ALEQTFE--GHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLTT---GQERGVNYVDYYPLP 196 (304)
T ss_dssp GTT-EEEEEEC--CCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEETTCSSCSEEEEC---CCTTCEEEEEECCST
T ss_pred CCc-chhhhhc--ccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCccceecc---CCcCcEEEEEEEEcC
Confidence 542 1111110 111111222222 45677777765 4678888765431111111 011111112221
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeE
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELY 260 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 260 (329)
++.+++.|+.+ ..+..||..+.+-...-. ........+.+ ++.+++.|+.+ ..+.
T Consensus 197 ~~~~l~s~s~D----~~i~iWd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~D--------------g~i~ 253 (304)
T 2ynn_A 197 DKPYMITASDD----LTIKIWDYQTKSCVATLE-----GHMSNVSFAVFHPTLPIIISGSED--------------GTLK 253 (304)
T ss_dssp TCCEEEEEETT----SEEEEEETTTTEEEEEEE-----CCSSCEEEEEECSSSSEEEEEETT--------------SCEE
T ss_pred CCCEEEEEcCC----CeEEEEeCCCCccceeeC-----CCCCCEEEEEECCCCCEEEEEcCC--------------CeEE
Confidence 34566666654 578888887654322211 11111122223 44666667642 3577
Q ss_pred EEEcCCcee
Q 020245 261 SLDTETLVW 269 (329)
Q Consensus 261 ~~d~~~~~W 269 (329)
.+|+.+.+-
T Consensus 254 iWd~~~~~~ 262 (304)
T 2ynn_A 254 IWNSSTYKV 262 (304)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCce
Confidence 888876543
No 178
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.63 E-value=2.8 Score=38.89 Aligned_cols=112 Identities=12% Similarity=-0.009 Sum_probs=58.8
Q ss_pred ceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCC-CcccEEEEeCCCC-ceEEeeccCCCC-CCcc
Q 020245 149 NDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGV-EVDDVHCFDPAHA-QWAQVETSGEKP-TARS 224 (329)
Q Consensus 149 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~-~~~~~~~~d~~~~-~w~~~~~~~~~p-~~r~ 224 (329)
..++++|+.+.+-..+.... ........+.. -+++.++++..+.. ....++.+|..+. ..+.+....... ....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGE--PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCCCS--CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeeccCC--CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 57899999998866655321 11111122222 35654444443322 4458999999887 666654211100 0000
Q ss_pred eeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecC
Q 020245 225 VFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 225 ~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
......- ++++++.+..+. ...+|.+|......+.+..
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g------------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDG------------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTS------------SCEEEEEETTSCEEEECCC
T ss_pred CCceeecCCCCEEEEEEccCC------------ccEEEEEECCCCEEEecCC
Confidence 1112233 567665554321 3578899977777776653
No 179
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=94.62 E-value=1.1 Score=34.30 Aligned_cols=151 Identities=13% Similarity=0.215 Sum_probs=83.8
Q ss_pred eEEEECCEEEEEccccCCCCCCCceEEEECCCC--cEE--Eccc-CCCCCCCcccceeEe-eCCeEEEEcccCCCcCcce
Q 020245 77 TMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN--QWT--LLSN-GDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLND 150 (329)
Q Consensus 77 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~--~~~~-~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~ 150 (329)
+++.+++++|+|=| +.+|+++.... ... .+.. .+..|.... ++... .++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~ID-Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPRKLD-SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCSSCS-EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCCCcc-EEEEECCCCeEEEEeC-------CE
Confidence 34567999999965 34788876542 221 2211 123343222 22221 3689999988 56
Q ss_pred eEEEEcCCCe-EEEecCCCCCCC--CCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceE-----Eeec-cCCCCC
Q 020245 151 LWGFDVVDRK-WIQYPSAGENCK--GRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWA-----QVET-SGEKPT 221 (329)
Q Consensus 151 ~~~~~~~~~~-W~~~~~~~~~~~--~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~-----~~~~-~~~~p~ 221 (329)
.|+|+..+.. -..+...+ .|. ....++....++++|++-| +..|+||..+.+-. .+.. =..+
T Consensus 75 yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg------~~ywr~d~~~~~~~~gyPr~i~~~w~Gv-- 145 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSG------RRLWRFDVKAQMVDPRSASEVDRMFPGV-- 145 (195)
T ss_dssp EEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEET------TEEEEEETTTTEECGGGCEEHHHHSTTS--
T ss_pred EEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeC------CEEEEEeCCcccccCCCccChhhcCCCC--
Confidence 7888754321 12222221 122 1334444434688999977 68999998664321 1110 0012
Q ss_pred CcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 222 ARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 222 ~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
+..-.++...++.+|++-| +..|+||..+..
T Consensus 146 p~~idaa~~~~g~~Yffkg----------------~~y~~~~~~~~~ 176 (195)
T 1itv_A 146 PLDTHDVFQFREKAYFCQD----------------RFYWRVSSRSEL 176 (195)
T ss_dssp CSSCSEEEEETTEEEEEET----------------TEEEEEECCTTC
T ss_pred CCCCCEEEEeCCeEEEEeC----------------CEEEEEECCccE
Confidence 2223355566789999987 378899987764
No 180
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=94.60 E-value=1.3 Score=34.73 Aligned_cols=153 Identities=14% Similarity=0.274 Sum_probs=82.8
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc-EE--EEeeC-CCCCCCCcceeEEE-ECCEEEEEccccCCCCC
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT-WS--VADVT-GDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKE 97 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~-W~--~~~~~-~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 97 (329)
.-+++.+++++|+|-| +.+|+++..... .. .+... ..+| ....++... .++++|+|=|
T Consensus 33 ~DAi~~~~g~~~fFkg---------~~~Wr~~~~~~~~~~P~~I~~~wp~lp-~~IDAA~~~~~~~k~yfFkG------- 95 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKD---------RFIWRTVTPRDKPMGPLLVATFWPELP-EKIDAVYEAPQEEKAVFFAG------- 95 (218)
T ss_dssp CSEEEEETTEEEEEET---------TEEEEESSTTSCCEEEEEGGGTCTTSC-SCCSEEEEETTTTEEEEEET-------
T ss_pred EeEEEeCCCcEEEEEC---------CEEEEEeCCCCccCCCEEHHHhcCCCC-CCccEEEEECCCCEEEEEeC-------
Confidence 4456667899999988 567777755422 22 12111 1123 233333332 2578999965
Q ss_pred CCceEEEECCCCc--E-EEcccCCCCCCC-cccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEE-----Eec-
Q 020245 98 LNELYSFDTRTNQ--W-TLLSNGDAGPPH-RSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI-----QYP- 165 (329)
Q Consensus 98 ~~~~~~~d~~~~~--W-~~~~~~~~~p~~-r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~-----~~~- 165 (329)
+.+|+||..+.. + +.+...+. |.. ..-.++.. .++++|+|-| +..++||..+++-. .+.
T Consensus 96 -~~yW~y~~~~~~~gyPk~I~~~g~-p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~ 166 (218)
T 1gen_A 96 -NEYWIYSASTLERGYPKPLTSLGL-PPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIAD 166 (218)
T ss_dssp -TEEEEEETTEECTTCSEEGGGGTC-CTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHH
T ss_pred -CEEEEEcCccccCCCCccHhhcCC-CCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhh
Confidence 458999853110 0 12222211 211 11222332 4689999988 67899998876532 111
Q ss_pred CCCCCCCCCCCcEEEEEC--CEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 166 SAGENCKGRGGPGLIVTQ--GKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~--~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
.-+.. +..-.++...+ +.+|++-| +..|+||.....
T Consensus 167 ~w~g~--p~~idaAf~~~~~g~~YfFkg------~~y~~~~~~~~~ 204 (218)
T 1gen_A 167 AWNAI--PDNLDAVVDLQGGGHSYFFKG------AYYLKLENQSLK 204 (218)
T ss_dssp HSSSC--CSSCSEEEECTTTCEEEEEET------TEEEEEETTEEE
T ss_pred ccCCC--CCCCCEEEEEcCCCcEEEEEC------CEEEEEECCcee
Confidence 11111 12223444444 88999877 689999986544
No 181
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.58 E-value=1.6 Score=35.82 Aligned_cols=166 Identities=11% Similarity=0.040 Sum_probs=80.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCC-CCCCCCcceeEEEECCEEEEE----ccccC-------CCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTG-DVPPPRVGVTMAAVGHTIYMF----GGRDG-------THKE 97 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~p~~r~~~~~~~~~~~iyv~----GG~~~-------~~~~ 97 (329)
+++||+.... ...+.+||+. .+.+.+.... ..+..+....++.-+++||+. |-... ....
T Consensus 96 dG~l~v~~~~-------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~ 167 (305)
T 3dr2_A 96 QQRLVHCEHG-------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELA 167 (305)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSS
T ss_pred CCCEEEEECC-------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccC
Confidence 4566665321 1468888886 5665554321 111111222233336678885 32110 1122
Q ss_pred CCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCC-eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 98 LNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDR-HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 98 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
...+++||+.+.+.+.+. .. ......+..-++ .||+............+++|+...+.................
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~~----~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pd 242 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-DL----DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPD 242 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-EE----SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCC
T ss_pred CCeEEEEcCCCCcEEEEe-cC----CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCC
Confidence 457999999888777664 21 111122222344 577764322111125789998876542221111100111111
Q ss_pred cEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEee
Q 020245 177 PGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVE 214 (329)
Q Consensus 177 ~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~ 214 (329)
.-++-.++.+|+..+ ..+++|+++......+.
T Consensus 243 gi~~d~~G~lwv~~~------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 243 GFCVDRGGWLWSSSG------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp SEEECTTSCEEECCS------SEEEEECTTSCEEEEEE
T ss_pred eEEECCCCCEEEecC------CcEEEECCCCCEEEEEE
Confidence 222234567777542 46999999766555554
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.55 E-value=3 Score=38.78 Aligned_cols=147 Identities=16% Similarity=0.105 Sum_probs=71.9
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++++++.|+.+ ..+.+||..+.+-...-. . +. ..-.++.+ ++..++.|+.+ ..+..+|..
T Consensus 441 ~g~~l~sgs~D-------g~v~vwd~~~~~~~~~~~-~---h~-~~v~~~~~s~~~~~l~s~s~D------~~i~iwd~~ 502 (694)
T 3dm0_A 441 DGQFALSGSWD-------GELRLWDLAAGVSTRRFV-G---HT-KDVLSVAFSLDNRQIVSASRD------RTIKLWNTL 502 (694)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEE-C---CS-SCEEEEEECTTSSCEEEEETT------SCEEEECTT
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcceeEEe-C---CC-CCEEEEEEeCCCCEEEEEeCC------CEEEEEECC
Confidence 44556666532 578889987765322111 1 11 11122222 44556666554 457777765
Q ss_pred CCcEEEcccCCCCCCCcccceeEee--CC--eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-E
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAAD--DR--HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-T 182 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~~--~~--~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~ 182 (329)
...-..+.... ...+....++.+ ++ .+++.|+.+ ..+..||+.+.+-...-.. +...-.+++. .
T Consensus 503 ~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~----h~~~v~~v~~sp 571 (694)
T 3dm0_A 503 GECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRSTLAG----HTGYVSTVAVSP 571 (694)
T ss_dssp SCEEEEECSST--TSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEEECC----CSSCEEEEEECT
T ss_pred CCcceeeccCC--CCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEEEcC----CCCCEEEEEEeC
Confidence 54322222111 111111122222 22 455666654 4688899887764432221 1112222333 3
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
++++++.|+.+ ..+..||..+.+
T Consensus 572 dg~~l~sg~~D----g~i~iwd~~~~~ 594 (694)
T 3dm0_A 572 DGSLCASGGKD----GVVLLWDLAEGK 594 (694)
T ss_dssp TSSEEEEEETT----SBCEEEETTTTE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCc
Confidence 56777777755 467888887664
No 183
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.53 E-value=3.1 Score=38.88 Aligned_cols=109 Identities=8% Similarity=-0.152 Sum_probs=54.3
Q ss_pred eeEEEEcCC-CeEEEecCCCCCCCCCCCcEEEEECCEEEEEeee-CCCCcccEEEEeCCCCceEEeeccCCCC-CCccee
Q 020245 150 DLWGFDVVD-RKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGF-AGVEVDDVHCFDPAHAQWAQVETSGEKP-TARSVF 226 (329)
Q Consensus 150 ~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~-~~~~~~~~~~~d~~~~~w~~~~~~~~~p-~~r~~~ 226 (329)
.++.+|+.+ .+-..+..... .......... -+++.+++... .......++.+|..+.+...+....... ......
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred EEEEEECCCCCceEEecCCCC-cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 788888887 76554432210 0111111223 45554444333 2334568999999888877665321100 000111
Q ss_pred EEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeec
Q 020245 227 STVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWD 273 (329)
Q Consensus 227 ~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 273 (329)
....-++++++.+..+. ...+|.+|.+.. ...+.
T Consensus 342 ~~~spdg~~~~~~~~~g------------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTG------------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CEECTTSCEEEEECTTS------------SCEEEEECSSSC-EEESC
T ss_pred eEECCCCeEEEEecCCC------------ccEEEEEcCCCC-eeeee
Confidence 12223556666554321 247888887766 55554
No 184
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.51 E-value=1.7 Score=35.97 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=55.1
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCc--EEEcccCCCCCCCcccceeE-----eeCCeEEEEcccCCCcCcceeEEE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQ--WTLLSNGDAGPPHRSYHSTA-----ADDRHVYIFGGCGVSGRLNDLWGF 154 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~-----~~~~~i~v~GG~~~~~~~~~~~~~ 154 (329)
++.+++.|+.+ ..+..||..+.. ...+..... ...+.-.++. ..++.+++.|+.+ ..+..|
T Consensus 128 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~ 195 (357)
T 3i2n_A 128 GAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQG-ENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLF 195 (357)
T ss_dssp CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTT-SCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEE
T ss_pred CccEEEEEeCC------CeEEEEeCCCCCCcceeccccCC-CCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEE
Confidence 34566666544 468888887654 333332211 0111112222 1366777777654 468999
Q ss_pred EcCCCeEEEecCCCCCCCCCCCcEEEEE----CCEEEEEeeeCCCCcccEEEEeCCC
Q 020245 155 DVVDRKWIQYPSAGENCKGRGGPGLIVT----QGKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 155 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
|+.+.+-...... ...-.++... ++..++.|+.+ ..+..||..+
T Consensus 196 d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~ 243 (357)
T 3i2n_A 196 DLRNMALRWETNI-----KNGVCSLEFDRKDISMNKLVATSLE----GKFHVFDMRT 243 (357)
T ss_dssp ETTTTEEEEEEEC-----SSCEEEEEESCSSSSCCEEEEEEST----TEEEEEEEEE
T ss_pred ECccCceeeecCC-----CCceEEEEcCCCCCCCCEEEEECCC----CeEEEEeCcC
Confidence 9988875443322 1222333333 56667777654 4666777643
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.46 E-value=1.9 Score=36.24 Aligned_cols=192 Identities=14% Similarity=0.047 Sum_probs=90.9
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
+++.++.|+.+ ..+..||..+.+...... .+..........-++..++.||.+ ..+..|+....
T Consensus 75 d~~~l~s~s~D-------g~v~vWd~~~~~~~~~~~---~~~~~v~~~~~sp~g~~lasg~~d------~~i~v~~~~~~ 138 (354)
T 2pbi_B 75 DKRRIVSSSQD-------GKVIVWDSFTTNKEHAVT---MPCTWVMACAYAPSGCAIACGGLD------NKCSVYPLTFD 138 (354)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTCCEEEEEE---CSSSCCCEEEECTTSSEEEEESTT------SEEEEEECCCC
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCCcceEEe---cCCCCEEEEEECCCCCEEEEeeCC------CCEEEEEEecc
Confidence 44566666642 578889987665433222 112212222222245677777765 35666665432
Q ss_pred cEEEcccC-CCC-CCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE---C
Q 020245 110 QWTLLSNG-DAG-PPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT---Q 183 (329)
Q Consensus 110 ~W~~~~~~-~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~ 183 (329)
.-...... ... .....-.++. .-++..++.|+.+ ..+..||+.+.+-...-.. ....-.++... +
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQSFHG----HGADVLCLDLAPSET 209 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEEC----CSSCEEEEEECCCSS
T ss_pred ccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEEcC----CCCCeEEEEEEeCCC
Confidence 10000000 000 0000011111 1244455555543 4688899988764332211 11111122221 3
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEE
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYS 261 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 261 (329)
+.+++.|+.+ ..+..||+.+.+....-. . .. ....++.+ ++.+++.|+.+ ..+..
T Consensus 210 g~~l~sgs~D----g~v~~wd~~~~~~~~~~~--~--h~-~~v~~v~~~p~~~~l~s~s~D--------------~~v~l 266 (354)
T 2pbi_B 210 GNTFVSGGCD----KKAMVWDMRSGQCVQAFE--T--HE-SDVNSVRYYPSGDAFASGSDD--------------ATCRL 266 (354)
T ss_dssp CCEEEEEETT----SCEEEEETTTCCEEEEEC--C--CS-SCEEEEEECTTSSEEEEEETT--------------SCEEE
T ss_pred CCEEEEEeCC----CeEEEEECCCCcEEEEec--C--CC-CCeEEEEEeCCCCEEEEEeCC--------------CeEEE
Confidence 4677777765 578889988776543321 1 11 11122233 45667777642 35788
Q ss_pred EEcCCcee
Q 020245 262 LDTETLVW 269 (329)
Q Consensus 262 ~d~~~~~W 269 (329)
||+....-
T Consensus 267 wd~~~~~~ 274 (354)
T 2pbi_B 267 YDLRADRE 274 (354)
T ss_dssp EETTTTEE
T ss_pred EECCCCcE
Confidence 89877643
No 186
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.37 E-value=1.7 Score=35.33 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=42.0
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYH 127 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 127 (329)
..+..+|..+.+-..... .......+....+.+.+.|+.. ..+..++..+.........+ .......
T Consensus 89 g~v~iw~~~~~~~~~~~~-----~h~~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 155 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMT-----SHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSG--HSQEVCG 155 (318)
T ss_dssp SEEEEEETTTTEEEEEEE-----CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC--CSSCEEE
T ss_pred CcEEEeecCCceeEEEec-----CccceEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcC--ccCceEE
Confidence 457777777665322221 1111222333444455555433 23444555443322221111 1111222
Q ss_pred eeEeeCCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 128 STAADDRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 128 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
......++.++.|+.+ ..+..||..+.
T Consensus 156 ~~~~~~~~~l~s~~~d-----~~i~iwd~~~~ 182 (318)
T 4ggc_A 156 LRWAPDGRHLASGGND-----NLVNVWPSAPG 182 (318)
T ss_dssp EEECTTSSEEEEEETT-----SCEEEEESSCB
T ss_pred EEEcCCCCEEEEEecC-----cceeEEECCCC
Confidence 2223355666666654 35778888764
No 187
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.32 E-value=2.8 Score=37.61 Aligned_cols=174 Identities=4% Similarity=-0.001 Sum_probs=84.2
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
+++.++.|+.+ ..+..||.....-..+... ...-......-++++++.++.+ ..+..||.....-
T Consensus 396 dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~----~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 396 DGQTIASASDD------KTVKLWNRNGQLLQTLTGH----SSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLL 460 (577)
T ss_dssp TSSCEEEEETT------SEEEEECTTCCEEEEEECC----SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCEE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCEEEEecCC----CCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEE
Confidence 44555666544 3577777654433333222 1111122222366777777654 3577888766554
Q ss_pred EEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEE-EECCEEEEEc
Q 020245 162 IQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYG 239 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~G 239 (329)
..+... ...-.+++. .++++++.++.+ ..+..||.....-..+.. ... . -.+++ ..++++++.|
T Consensus 461 ~~~~~~-----~~~v~~~~~spd~~~las~~~d----~~i~iw~~~~~~~~~~~~---h~~-~-v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 461 QTLTGH-----SSSVRGVAFSPDGQTIASASDD----KTVKLWNRNGQLLQTLTG---HSS-S-VRGVAFSPDGQTIASA 526 (577)
T ss_dssp EEEECC-----SSCEEEEEECTTSCEEEEEETT----SEEEEEETTSCEEEEEEC---CSS-C-EEEEEECTTSSCEEEE
T ss_pred EEEcCC-----CCCEEEEEEcCCCCEEEEEeCC----CEEEEEcCCCCEEEEEeC---CCC-C-EEEEEEcCCCCEEEEE
Confidence 444332 112222333 356777777644 467777864433333321 111 1 11222 2255666666
Q ss_pred CccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCC
Q 020245 240 GEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSP 309 (329)
Q Consensus 240 G~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~ 309 (329)
+.+ ..|..||.....-..+.. ..... .+++...+ +..++.||.+.
T Consensus 527 ~~d--------------g~v~lwd~~~~~~~~~~~-------h~~~v---~~~~fs~d-g~~l~s~~~D~ 571 (577)
T 2ymu_A 527 SDD--------------KTVKLWNRNGQLLQTLTG-------HSSSV---WGVAFSPD-GQTIASASSDK 571 (577)
T ss_dssp ETT--------------SEEEEECTTSCEEEEEEC-------CSSCE---EEEEECTT-SSCEEEEETTS
T ss_pred ECc--------------CEEEEEeCCCCEEEEEcC-------CCCCE---EEEEEcCC-CCEEEEEeCCC
Confidence 642 357778876655555443 11221 23333333 44677787653
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.30 E-value=2 Score=35.73 Aligned_cols=203 Identities=9% Similarity=0.060 Sum_probs=105.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCC--cEEEEeeCCCC---CCCCcce-eEEEE--CCEEEEEccccCCCCCCCce
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETL--TWSVADVTGDV---PPPRVGV-TMAAV--GHTIYMFGGRDGTHKELNEL 101 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~---p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~ 101 (329)
+++||+.... .+.+.+||+... .-..+...... +...... .++.. ++.||+..+. ....+
T Consensus 101 ~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~-----~~~~I 168 (329)
T 3fvz_A 101 DGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY-----CNSRI 168 (329)
T ss_dssp TSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS-----SCCEE
T ss_pred CCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC-----CCCeE
Confidence 4577776542 257888988754 22333321100 1111122 23333 5789998642 23578
Q ss_pred EEEECCCCcEEEcccCCCC----CCC-cccceeEee-C-CeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCC
Q 020245 102 YSFDTRTNQWTLLSNGDAG----PPH-RSYHSTAAD-D-RHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGR 174 (329)
Q Consensus 102 ~~~d~~~~~W~~~~~~~~~----p~~-r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 174 (329)
.+||.....-..+...+.. +.. ..-..++.. + +.|||..... ..+.+|++.+.+....-..+ ....
T Consensus 169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-----~~I~~~~~~~G~~~~~~~~~--~~~~ 241 (329)
T 3fvz_A 169 VQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-----GRIQCFKTDTKEFVREIKHA--SFGR 241 (329)
T ss_dssp EEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEECCT--TTTT
T ss_pred EEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-----CEEEEEECCCCcEEEEEecc--ccCC
Confidence 9999665544444322211 111 112233332 4 7999885432 57999999877665443322 1222
Q ss_pred CCcEEEEECCEEEEEeeeCC---CCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcC
Q 020245 175 GGPGLIVTQGKIWVVYGFAG---VEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHL 250 (329)
Q Consensus 175 ~~~~~~~~~~~l~v~gG~~~---~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~ 250 (329)
...+++...+.+|...|..- .....+..+|..+.+....-... .......++++.- ++.||+....
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~~p~~ia~~~dG~lyvad~~--------- 311 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV-RKHFDMPHDIVASEDGTVYIGDAH--------- 311 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS-SSCCSSEEEEEECTTSEEEEEESS---------
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC-CCccCCeeEEEECCCCCEEEEECC---------
Confidence 22334444577777766321 13357889998777665543211 1111223333333 4588887653
Q ss_pred CCCeeeceeEEEEcCC
Q 020245 251 GAGKFAGELYSLDTET 266 (329)
Q Consensus 251 ~~~~~~~~~~~~d~~~ 266 (329)
.+.|++|+++.
T Consensus 312 -----~~~I~~~~~~~ 322 (329)
T 3fvz_A 312 -----TNTVWKFTLTE 322 (329)
T ss_dssp -----SCCEEEEEEEE
T ss_pred -----CCEEEEEeCCc
Confidence 24688888754
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.29 E-value=3 Score=37.86 Aligned_cols=206 Identities=12% Similarity=0.013 Sum_probs=99.8
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEE-cccCCC-------CCCCcccceeEeeCCeEEEEcccCCCcCcceeEEE
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTL-LSNGDA-------GPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGF 154 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~~~-------~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 154 (329)
..+|+..- ....+..+|..+.+-.+ ++..+. .|.+|........++..+++-=. ....++..
T Consensus 256 k~l~v~n~------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~----~~g~v~~v 325 (567)
T 1qks_A 256 KYAIAGAY------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK----ETGKILLV 325 (567)
T ss_dssp TEEEEEEE------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET----TTTEEEEE
T ss_pred CEEEEEEc------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec----CCCeEEEE
Confidence 36777532 23678888987765433 222110 12334333333334333333211 22567888
Q ss_pred EcCCCeEEEecCCCCCCCCCCCcEEEEE-CCE-EEEEeeeCCCCcccEEEEeCCCCceEEeecc-CCCCCCcceeEEEEE
Q 020245 155 DVVDRKWIQYPSAGENCKGRGGPGLIVT-QGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQVETS-GEKPTARSVFSTVGI 231 (329)
Q Consensus 155 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~-~~~p~~r~~~~~~~~ 231 (329)
|..+.+...+... +..+.-|..... +++ +|+... ..+.+..+|..+.+-.....- +..|.+..+.....-
T Consensus 326 d~~~~~~~~v~~i---~~~~~~~d~~~~pdgr~~~va~~----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p 398 (567)
T 1qks_A 326 DYTDLNNLKTTEI---SAERFLHDGGLDGSHRYFITAAN----ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 398 (567)
T ss_dssp ETTCSSEEEEEEE---ECCSSEEEEEECTTSCEEEEEEG----GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred ecCCCccceeeee---eccccccCceECCCCCEEEEEeC----CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECC
Confidence 8877655444444 234444444433 344 333332 236889999988865444333 344444333222222
Q ss_pred -CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc-----eeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEc
Q 020245 232 -GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL-----VWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYG 305 (329)
Q Consensus 232 -~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~G 305 (329)
.+.+|+..-.. ...|-.+|.... .|+.+.. ++..... ...+....+.+.+|+--
T Consensus 399 ~~g~v~~t~~~g-------------~~~Vsvid~~~~~~~~~~~kvv~~------i~~~g~g-~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 399 TFGPVWATSHMG-------------DDSVALIGTDPEGHPDNAWKILDS------FPALGGG-SLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp TTEEEEEEEBSS-------------SSEEEEEECCTTTCTTTBTSEEEE------EECSCSC-CCCEECCTTCSEEEEEC
T ss_pred CCCcEEEeCCCC-------------CCeEEEecCCCCCCccccCEEEEE------EecCCCC-CEEEEeCCCCCeEEEec
Confidence 24666654211 135778887653 2877765 2221111 01122233325688744
Q ss_pred CCCCCCCcccceEEEecccC
Q 020245 306 GNSPSNDRLDDIYFFTPCLD 325 (329)
Q Consensus 306 G~~~~~~~~~~v~~~~~~~~ 325 (329)
-.+.+....+.|.+||+++.
T Consensus 459 ~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 459 TLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TTCSSHHHHTCEEEEEGGGC
T ss_pred CCCCCcccCceEEEEECCcc
Confidence 22211123568888888765
No 190
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.28 E-value=3.4 Score=38.39 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=73.9
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++++++.|+.+ ..+..+|..+.+-...-.. ....-.......+++.++.|+.+ ..+..||.....-
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRRFVG---HTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECK 506 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEEC---CSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEE
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeEEeC---CCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcc
Confidence 45677777655 4788899887643321111 01111111222356666777654 3577777765543
Q ss_pred EEecCCCCCCCCCCCcEEEEEC-C--EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEE
Q 020245 162 IQYPSAGENCKGRGGPGLIVTQ-G--KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIV 236 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-~--~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~ 236 (329)
..+..... .+...-.++.... + .+++.|+.+ ..+..||+.+.+-...-. .......++.+ ++.++
T Consensus 507 ~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~d----~~v~vwd~~~~~~~~~~~-----~h~~~v~~v~~spdg~~l 576 (694)
T 3dm0_A 507 YTISEGGE-GHRDWVSCVRFSPNTLQPTIVSASWD----KTVKVWNLSNCKLRSTLA-----GHTGYVSTVAVSPDGSLC 576 (694)
T ss_dssp EEECSSTT-SCSSCEEEEEECSCSSSCEEEEEETT----SCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEE
T ss_pred eeeccCCC-CCCCcEEEEEEeCCCCcceEEEEeCC----CeEEEEECCCCcEEEEEc-----CCCCCEEEEEEeCCCCEE
Confidence 33322210 0111112222222 2 356666654 468888887665433221 11111122223 55777
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
+.|+.+ ..|.++|+.+.+
T Consensus 577 ~sg~~D--------------g~i~iwd~~~~~ 594 (694)
T 3dm0_A 577 ASGGKD--------------GVVLLWDLAEGK 594 (694)
T ss_dssp EEEETT--------------SBCEEEETTTTE
T ss_pred EEEeCC--------------CeEEEEECCCCc
Confidence 777642 357888987764
No 191
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=94.26 E-value=2.1 Score=36.43 Aligned_cols=156 Identities=12% Similarity=0.174 Sum_probs=84.3
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcE--EEEeeC-CCCCCCCcceeEEE-ECCEEEEEccccCCCCCC
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTW--SVADVT-GDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKEL 98 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W--~~~~~~-~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 98 (329)
.-+++.+++++|+|=| +.+|+++.....- ..+... ..+| ....++... .++++|+|=|
T Consensus 183 fDAv~~~~g~~~fFkg---------~~~Wr~~~~~~~~~p~~I~~~wpgLP-~~iDAa~~~~~~g~~~fFkg-------- 244 (365)
T 3ba0_A 183 FDAVTTVGNKIFFFKD---------RFFWLKVSERPKTSVNLISSLWPTLP-SGIEAAYEIEARNQVFLFKD-------- 244 (365)
T ss_dssp CSCEEEETTEEEEEET---------TEEEECCSSCCCCCEEEHHHHCSSCC-SSCCEEEEEGGGTEEEEEET--------
T ss_pred eeeEEEcCCeEEEEeC---------CEEEEEcCCCccCCccchhhhccCCC-CCccEEEEecCCCEEEEEeC--------
Confidence 3455667999999987 5577776543221 111111 1234 233333322 2789999965
Q ss_pred CceEEEECCCCc--E-EEcccCCCCCCC--cccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEE-----ecC-
Q 020245 99 NELYSFDTRTNQ--W-TLLSNGDAGPPH--RSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ-----YPS- 166 (329)
Q Consensus 99 ~~~~~~d~~~~~--W-~~~~~~~~~p~~--r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~-----~~~- 166 (329)
+.+|+|+..+.. + +.+...+ .|.. .-.++... .++++|+|-| +..|+||..+++-.. +..
T Consensus 245 ~~yWr~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~ 316 (365)
T 3ba0_A 245 DKYWLISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKN 316 (365)
T ss_dssp TEEEECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHH
T ss_pred CEEEEEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhc
Confidence 347777643211 1 2333221 2321 11222222 2579999988 678999987765322 100
Q ss_pred CCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEE
Q 020245 167 AGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~ 212 (329)
.+. .+..--++... ++++|.+-| +..|+||..+.+-..
T Consensus 317 f~g--~p~~iDaA~~~~~g~~YfFkg------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 317 FQG--IGPKIDAVFYSKNKYYYFFQG------SNQFEYDFLLQRITK 355 (365)
T ss_dssp STT--CCSSCSEEEEETTTEEEEEET------TEEEEEETTTTEEEE
T ss_pred CCC--CCCccceeeEecCCcEEEEeC------CEEEEEECCccEEec
Confidence 111 12222333334 789999877 689999998776554
No 192
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.25 E-value=1.1 Score=38.93 Aligned_cols=61 Identities=10% Similarity=-0.036 Sum_probs=33.8
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCe----EEEecCCCCCCCCCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeCC
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRK----WIQYPSAGENCKGRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~----W~~~~~~~~~~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
++.+++.|+.+ ..+..||+.+.. -..+.. ....-.+++.. ++ .+++.|+.+ ..+..||..
T Consensus 243 ~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~~~~l~tg~~d----g~v~vwd~~ 308 (430)
T 2xyi_A 243 HESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDA-----HTAEVNCLSFNPYSEFILATGSAD----KTVALWDLR 308 (430)
T ss_dssp CTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEEC-----CSSCEEEEEECSSCTTEEEEEETT----SEEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeec-----CCCCeEEEEeCCCCCCEEEEEeCC----CeEEEEeCC
Confidence 56677777654 568889988652 111111 11112222222 23 378888755 578888886
Q ss_pred C
Q 020245 207 H 207 (329)
Q Consensus 207 ~ 207 (329)
.
T Consensus 309 ~ 309 (430)
T 2xyi_A 309 N 309 (430)
T ss_dssp C
T ss_pred C
Confidence 5
No 193
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.12 E-value=2.3 Score=35.91 Aligned_cols=150 Identities=15% Similarity=0.067 Sum_probs=73.9
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEee------C-CCC-CCCCcceeEEEE---CCEEEEEccccCCCCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADV------T-GDV-PPPRVGVTMAAV---GHTIYMFGGRDGTHKEL 98 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~------~-~~~-p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~ 98 (329)
++.+++.|+.+ ..+..||..+.+...... . ... ......-..+.+ ++.+++.|+.+
T Consensus 55 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------ 121 (408)
T 4a11_B 55 EGRYMLSGGSD-------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------ 121 (408)
T ss_dssp TCCEEEEEETT-------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT------
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC------
Confidence 45777777643 568888887654321111 0 000 011111222333 34466666544
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccceeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG 176 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 176 (329)
..+..||..+.+-...-.. +........... ++.+++.|+.+ ..+..||+.+.+-...-.. ....-
T Consensus 122 ~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~~~~----~~~~v 189 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHILQG----HRQEI 189 (408)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEEECC----CCSCE
T ss_pred CeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeeeecC----CCCcE
Confidence 4688899888764443332 122221111111 34577777654 4688899887643222111 11122
Q ss_pred cEEEEE-CCE-EEEEeeeCCCCcccEEEEeCCCC
Q 020245 177 PGLIVT-QGK-IWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 177 ~~~~~~-~~~-l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
.++... ++. +++.|+.+ ..+..||..+.
T Consensus 190 ~~~~~~~~~~~ll~~~~~d----g~i~i~d~~~~ 219 (408)
T 4a11_B 190 LAVSWSPRYDYILATASAD----SRVKLWDVRRA 219 (408)
T ss_dssp EEEEECSSCTTEEEEEETT----SCEEEEETTCS
T ss_pred EEEEECCCCCcEEEEEcCC----CcEEEEECCCC
Confidence 223333 333 67777654 46778887554
No 194
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.06 E-value=0.73 Score=38.23 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=41.8
Q ss_pred eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 132 DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 132 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
.++++|+.++.+ ..+.++|+.+.+.......+ .....+.++.. ++ .+|+.+..+ ..++.+|+.+.+
T Consensus 9 ~~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~~----~~i~~~d~~t~~ 76 (349)
T 1jmx_B 9 AGHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNHY----GDIYGIDLDTCK 76 (349)
T ss_dssp TTCEEEEEEETT-----TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETTT----TEEEEEETTTTE
T ss_pred CCCEEEEEeCCC-----CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCCC----CcEEEEeCCCCc
Confidence 466788877643 57999999998765544332 11112333333 44 467665322 579999998776
Q ss_pred eEE
Q 020245 210 WAQ 212 (329)
Q Consensus 210 w~~ 212 (329)
...
T Consensus 77 ~~~ 79 (349)
T 1jmx_B 77 NTF 79 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 195
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.02 E-value=2.6 Score=36.09 Aligned_cols=193 Identities=12% Similarity=0.123 Sum_probs=103.2
Q ss_pred ceEEEeCCC--CcEEEEeeCCCCCCCCcceeEEEE---CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCC-C
Q 020245 49 NLHVFDLET--LTWSVADVTGDVPPPRVGVTMAAV---GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGP-P 122 (329)
Q Consensus 49 ~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p-~ 122 (329)
.+++++... .+|+.+... + ....-++++.. .+.||+.+... ..-..+++.+-...+|+++......+ .
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~--~-~~~~v~~i~~dp~~~~~l~~g~~~g---~~g~gl~~s~D~G~tW~~~~~~~~~~~~ 105 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPV--F-LGHTIHHIVQDPREPERMLMAARTG---HLGPTVFRSDDGGGNWTEATRPPAFNKA 105 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEE--S-TTSEEEEEEECSSSTTCEEEEEEC-----CCEEEEEESSTTSCCEECSBCCCCCCC
T ss_pred ceEEEECCCCCCCceECCcc--C-CCCceEEEEECCCCCCeEEEEecCC---CCCccEEEeCCCCCCceECCccccCCCc
Confidence 477777654 689886421 1 22223344443 45788765321 11125777777778999887531111 1
Q ss_pred -Cc-------ccceeEee----CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCC--------------CCCC
Q 020245 123 -HR-------SYHSTAAD----DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCK--------------GRGG 176 (329)
Q Consensus 123 -~r-------~~~~~~~~----~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~--------------~~~~ 176 (329)
.+ .-.+++.. .+.||+.+.. .-+++.+....+|+.+......|. ....
T Consensus 106 ~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 106 PEGETGRVVDHVFWLTPGHASEPGTWYAGTSP------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp C----CCCCCEEEEEEECCTTSTTCEEEEEET------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred ccccccccccceeEEEeCCCCCCCEEEEEecC------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 11 11122222 4677765421 357888778889999864211111 1112
Q ss_pred cEEEEE---CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccC---CCCCC-----cceeEEEEEC---CEEEEEcCcc
Q 020245 177 PGLIVT---QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSG---EKPTA-----RSVFSTVGIG---KHIVVYGGEV 242 (329)
Q Consensus 177 ~~~~~~---~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~---~~p~~-----r~~~~~~~~~---~~i~i~GG~~ 242 (329)
++++.. .+.+|+.... ..+++.+....+|+.+.... .+|.+ ...+.++... +.||+...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~-----ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-- 252 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSS-----GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-- 252 (394)
T ss_dssp EEEEECTTCTTCEEEEEET-----BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--
T ss_pred eEEEECCCCCCEEEEEECC-----CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--
Confidence 233332 2457765432 35888887888999885311 12211 2234443332 45666321
Q ss_pred CCCCCCcCCCCeeeceeEEEEcCCceeEeecC
Q 020245 243 DPSDLGHLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
..+++.+-...+|+.+..
T Consensus 253 --------------~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 253 --------------CGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp --------------TEEEEEETTTTEEECGGG
T ss_pred --------------CeEEEeCCCCCcceECCC
Confidence 358889888999999864
No 196
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.97 E-value=5.6 Score=39.74 Aligned_cols=182 Identities=12% Similarity=0.014 Sum_probs=88.2
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE----CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV----GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPH 123 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~ 123 (329)
..+..||..+.+....-. .....-.++.+ +..+++.|+.+ ..+..||..+.+-...-.. ...
T Consensus 679 ~~v~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~---h~~ 744 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYD-----EHSEQVNCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMFG---HTN 744 (1249)
T ss_dssp SEEEEEETTTCCEEEEEE-----CCSSCEEEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEECC---CSS
T ss_pred CeEEEEECCCCceEEEEc-----CCCCcEEEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheecC---CCC
Confidence 568889988766433221 11112223333 23355555544 4688899887754322111 111
Q ss_pred cccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCC---------CCCCCCcEE-EEECCEEEEEeeeC
Q 020245 124 RSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGEN---------CKGRGGPGL-IVTQGKIWVVYGFA 193 (329)
Q Consensus 124 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~---------~~~~~~~~~-~~~~~~l~v~gG~~ 193 (329)
.-......-++..++.|+.+ ..+..||..+..-......... .......++ ...+++.+++++.
T Consensus 745 ~v~~~~~sp~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~- 818 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCSAD-----GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK- 818 (1249)
T ss_dssp CEEEEEECSSTTEEEEEESS-----SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET-
T ss_pred CEEEEEEecCCCEEEEEECC-----CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC-
Confidence 11122222356677777754 4688888877653332211100 000011111 1234555555542
Q ss_pred CCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCcee
Q 020245 194 GVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVW 269 (329)
Q Consensus 194 ~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 269 (329)
..+..||..+.........+ ...........-++.++++|+.+ ..+..+|..+..-
T Consensus 819 ----~~v~~~d~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d--------------g~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 819 ----NKVLLFDIHTSGLLAEIHTG--HHSTIQYCDFSPYDHLAVIALSQ--------------YCVELWNIDSRLK 874 (1249)
T ss_dssp ----TEEEEEETTTCCEEEEEECS--SSSCCCEEEECSSTTEEEEECSS--------------SCEEEEETTTTEE
T ss_pred ----CcEEEEEecCCCceeEEcCC--CCCceEEEEEcCCCCEEEEEeCC--------------CeEEEEEcCCCce
Confidence 57888998777654443211 11111122222355666767642 3577888876643
No 197
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.93 E-value=2.6 Score=35.76 Aligned_cols=193 Identities=15% Similarity=-0.016 Sum_probs=90.5
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++.+++.|+.+ ..+.+||..+.+-...... ...........-+++.++.||.+ ..+..||..+.
T Consensus 77 ~~~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~---h~~~v~~~~~s~~g~~las~~~d------~~v~iw~~~~~ 140 (380)
T 3iz6_a 77 EKNWIVSASQD-------GRLIVWNALTSQKTHAIKL---HCPWVMECAFAPNGQSVACGGLD------SACSIFNLSSQ 140 (380)
T ss_dssp TSSCEEEEETT-------SEEEEEETTTTEEEEEEEC---CCTTCCCCEECTTSSEEEECCSS------SCCEEEECCCC
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCccceEEec---CCCCEEEEEECCCCCEEEEeeCC------CcEEEEECCCC
Confidence 44555656532 5788999887654322221 11112222223356677777765 45667776543
Q ss_pred cEEEcccCCCCCCCcccc-----eeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCC--CcEEE
Q 020245 110 QWTLLSNGDAGPPHRSYH-----STAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRG--GPGLI 180 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~-----~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~--~~~~~ 180 (329)
.-..- ... ......+| ++... ++..++.|+.+ ..+..||+.+.+-...-.... +.... -.++.
T Consensus 141 ~~~~~-~~~-~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~-~~~h~~~v~~~~ 212 (380)
T 3iz6_a 141 ADRDG-NMP-VSRVLTGHKGYASSCQYVPDQETRLITGSGD-----QTCVLWDVTTGQRISIFGSEF-PSGHTADVLSLS 212 (380)
T ss_dssp SSCCC-SST-TCCBCCCCSSCCCCCBCCSSSSSCEEEECTT-----SCEEEECTTTCCEEEEECCCS-SSSCCSCEEEEE
T ss_pred ccccC-Ccc-ceeeccCCCcceEEEEEecCCCCEEEEECCC-----CcEEEEEcCCCcEEEEeeccc-CCCCccCeEEEE
Confidence 21100 000 00001111 11111 23445555544 468889988876544332110 11111 11222
Q ss_pred E--ECCEEEEEeeeCCCCcccEEEEeCCCC--ceEEeeccCCCCCCcceeEEEE-ECCEEEEEcCccCCCCCCcCCCCee
Q 020245 181 V--TQGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQVETSGEKPTARSVFSTVG-IGKHIVVYGGEVDPSDLGHLGAGKF 255 (329)
Q Consensus 181 ~--~~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~ 255 (329)
. .++.+++.|+.+ ..+..||+... ....+.. .... -.+++. .++..++.|+.+
T Consensus 213 ~~~~~~~~l~sgs~D----~~v~~wd~~~~~~~~~~~~~---h~~~--v~~v~~~p~~~~l~s~s~D------------- 270 (380)
T 3iz6_a 213 INSLNANMFISGSCD----TTVRLWDLRITSRAVRTYHG---HEGD--INSVKFFPDGQRFGTGSDD------------- 270 (380)
T ss_dssp ECSSSCCEEEEEETT----SCEEEEETTTTCCCCEEECC---CSSC--CCEEEECTTSSEEEEECSS-------------
T ss_pred eecCCCCEEEEEECC----CeEEEEECCCCCcceEEECC---cCCC--eEEEEEecCCCeEEEEcCC-------------
Confidence 2 256788888765 46778887532 2222211 1011 112222 255677777743
Q ss_pred eceeEEEEcCCcee
Q 020245 256 AGELYSLDTETLVW 269 (329)
Q Consensus 256 ~~~~~~~d~~~~~W 269 (329)
..+..+|+.+..-
T Consensus 271 -~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 271 -GTCRLFDMRTGHQ 283 (380)
T ss_dssp -SCEEEEETTTTEE
T ss_pred -CeEEEEECCCCcE
Confidence 3578889887653
No 198
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.85 E-value=4.4 Score=38.14 Aligned_cols=189 Identities=17% Similarity=0.172 Sum_probs=99.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++.|+|... +.+++||+.+.++.. +. . . ....-.+++..++.|+|.. ...+++||+.++
T Consensus 73 ~g~lWigT~---------~Gl~~yd~~~~~f~~-~~-~-~-~~~~i~~i~~~~g~lWigt--------~~Gl~~~~~~~~ 131 (758)
T 3ott_A 73 NTYLYMGTD---------NGILVYNYRADRYEQ-PE-T-D-FPTDVRTMALQGDTLWLGA--------LNGLYTYQLQSR 131 (758)
T ss_dssp TTEEEEEET---------TEEEEEETTTTEECC-CS-C-C-CCSCEEEEEEETTEEEEEE--------TTEEEEEETTTC
T ss_pred CCcEEEEeC---------CCeEEEeCCCCEEEC-cc-c-C-CCceEEEEEecCCcEEEEc--------CCcceeEeCCCC
Confidence 457777442 568899999877654 11 1 1 1111122334577888742 126899999998
Q ss_pred cEEEcccC-CCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCC-CCCCCcEEEEE-C-C
Q 020245 110 QWTLLSNG-DAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENC-KGRGGPGLIVT-Q-G 184 (329)
Q Consensus 110 ~W~~~~~~-~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~-~~~~~~~~~~~-~-~ 184 (329)
+++.+... ...+... -.+++. -++.|++.-. .-+++|++.++++..+....... ....-.++... + +
T Consensus 132 ~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~ 203 (758)
T 3ott_A 132 KLTSFDTRRNGLPNNT-IYSIIRTKDNQIYVGTY-------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQ 203 (758)
T ss_dssp CEEEECHHHHCCSCSC-EEEEEECTTCCEEEEET-------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTT
T ss_pred eEEEeccCCCCcCCCe-EEEEEEcCCCCEEEEeC-------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCC
Confidence 88876321 1112111 122222 2678887321 34889999998887654321100 01111222222 2 3
Q ss_pred EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 185 KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
.|+| |-. .-+++||+.+.+++.... ++.. .-.+++.. ++.|+|... ..+.+||
T Consensus 204 ~lWi-gt~-----~Gl~~~~~~~~~~~~~~~---l~~~-~i~~i~~d~~g~lWigT~----------------~Gl~~~~ 257 (758)
T 3ott_A 204 CVWI-GTE-----GYLFQYFPSTGQIKQTEA---FHNN-SIKSLALDGNGDLLAGTD----------------NGLYVYH 257 (758)
T ss_dssp EEEE-EEE-----EEEEEEETTTTEEEEEEE---EEEE-EEEEEEECTTCCEEEEET----------------TEEEEEC
T ss_pred EEEE-EEC-----CCCeEEcCCCCeEEeccC---CCCC-eEEEEEEcCCCCEEEEeC----------------CceeEEe
Confidence 4676 321 358899998888876542 1111 11222222 446666321 2577888
Q ss_pred cCCceeEeec
Q 020245 264 TETLVWTRWD 273 (329)
Q Consensus 264 ~~~~~W~~~~ 273 (329)
..+..++.+.
T Consensus 258 ~~~~~~~~~~ 267 (758)
T 3ott_A 258 NDTTPLQHII 267 (758)
T ss_dssp CTTSCCEEEC
T ss_pred cCCCcEEEEE
Confidence 8777776654
No 199
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=93.67 E-value=3.3 Score=36.38 Aligned_cols=154 Identities=14% Similarity=0.131 Sum_probs=82.0
Q ss_pred eEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEE--cccC-CCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeE
Q 020245 77 TMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTL--LSNG-DAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLW 152 (329)
Q Consensus 77 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~--~~~~-~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 152 (329)
+++.+.+++|+|=|. .+|+++.....+.. +... +..|.... ++... .++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~~iD-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPNGLE-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCSSCC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCCCee-EEEEEcCCCeEEEEeC-------CEEE
Confidence 455689999999653 36666654433321 2111 22233222 12111 3789999977 5677
Q ss_pred EEEcCC---CeEEEec---CCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceE-----EeeccCCCC
Q 020245 153 GFDVVD---RKWIQYP---SAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWA-----QVETSGEKP 220 (329)
Q Consensus 153 ~~~~~~---~~W~~~~---~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~-----~~~~~~~~p 220 (329)
+|+..+ +--..+. ..+.. ......+.... ++++|++-| +..|+||....+-. .+.. ..|
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~-~~~IDAA~~~~~~~k~yfFkG------~~yw~yd~~~~~~~~gYPk~I~~--~fp 401 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRT-VKHIDAALSEENTGKTYFFVA------NKYWRYDEYKRSMDPGYPKMIAH--DFP 401 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTT-CCCCCEEEEETTTTEEEEEET------TEEEEEETTTTEECSSCSEEHHH--HST
T ss_pred EecCCcccCCCceeeehhhcCCCC-CCccceEEEEcCCCeEEEEeC------CEEEEEeCCCccccCCCCcchhh--cCC
Confidence 776432 1112222 11111 12233333322 589999977 69999997643211 1111 111
Q ss_pred -CCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe
Q 020245 221 -TARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 221 -~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
.+..--+++..++++|++-| +..|+||..+.+=..
T Consensus 402 gip~~iDAA~~~~g~~YFFkg----------------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 402 GIGHKVDAVFMKDGFFYFFHG----------------TRQYKFDPKTKRILT 437 (450)
T ss_dssp TSCSCCSEEEEETTEEEEEET----------------TEEEEEETTTTEEEE
T ss_pred CCCCCccEEEEcCCeEEEEeC----------------CEEEEEECCcceEec
Confidence 12222344456889999987 478999988776543
No 200
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.61 E-value=4.6 Score=37.59 Aligned_cols=237 Identities=12% Similarity=0.124 Sum_probs=117.4
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCC-cceeEEEECCEEEEEccccC------CCCCCCceEEEECCCCcE--EEcccCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPR-VGVTMAAVGHTIYMFGGRDG------THKELNELYSFDTRTNQW--TLLSNGD 118 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~~~d~~~~~W--~~~~~~~ 118 (329)
..++++|+.+++....... ..+ ...+.. .+..||+..-... .......+++++..+..= ..+-...
T Consensus 155 ~~i~v~dl~tg~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEEEETTTCSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred EEEEEEECCCCCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 5789999999887654321 111 222333 3334544432210 013455688888776542 1222111
Q ss_pred CCCCCc-ccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCC--eEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCC
Q 020245 119 AGPPHR-SYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDR--KWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGV 195 (329)
Q Consensus 119 ~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~ 195 (329)
. ..+. .......-+++..++.-.. ....+.++.+|..+. .+..+.... ..........++.+|++...+ .
T Consensus 230 ~-~~~~~~~~~~~SpDg~~l~~~~~~-~~~~~~i~~~d~~~~~~~~~~l~~~~----~~~~~~~~~~g~~l~~~t~~~-~ 302 (693)
T 3iuj_A 230 P-AQHHRYVGATVTEDDRFLLISAAN-STSGNRLYVKDLSQENAPLLTVQGDL----DADVSLVDNKGSTLYLLTNRD-A 302 (693)
T ss_dssp G-GGCCSEEEEEECTTSCEEEEEEES-SSSCCEEEEEETTSTTCCCEEEECSS----SSCEEEEEEETTEEEEEECTT-C
T ss_pred C-CCCeEEEEEEEcCCCCEEEEEEcc-CCCCcEEEEEECCCCCCceEEEeCCC----CceEEEEeccCCEEEEEECCC-C
Confidence 0 0011 1112223345444443211 112268899998765 677776542 111112334577888876432 2
Q ss_pred CcccEEEEeCCCC---ceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEee
Q 020245 196 EVDDVHCFDPAHA---QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRW 272 (329)
Q Consensus 196 ~~~~~~~~d~~~~---~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 272 (329)
....++.+|+++. .|+.+.... .. .. .....++.|++..-... ...++++|++....+.+
T Consensus 303 ~~~~l~~~d~~~~~~~~~~~l~~~~---~~-~~-~~s~~g~~lv~~~~~~g------------~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 303 PNRRLVTVDAANPGPAHWRDLIPER---QQ-VL-TVHSGSGYLFAEYMVDA------------TARVEQFDYEGKRVREV 365 (693)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCC---SS-CE-EEEEETTEEEEEEEETT------------EEEEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCCCCCccccEEEecCC---CC-EE-EEEEECCEEEEEEEECC------------eeEEEEEECCCCeeEEe
Confidence 3467899998663 488776422 11 12 44455666665533211 34789999987766666
Q ss_pred cCCCCCCCCCCCCCcceecccccCCcceEEE-EcCCCCCCCcccceEEEecccCC
Q 020245 273 DDGPGSDHHPGPRGWCAFAGGLRGGKHGLLV-YGGNSPSNDRLDDIYFFTPCLDG 326 (329)
Q Consensus 273 ~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i-~GG~~~~~~~~~~v~~~~~~~~~ 326 (329)
.. |........+.. .++ +.+++ +.+.. .-..++.||+++.+
T Consensus 366 ~~-------p~~~~~~~~~~~-~d~-~~l~~~~ss~~----tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 366 AL-------PGLGSVSGFNGK-HDD-PALYFGFENYA----QPPTLYRFEPKSGA 407 (693)
T ss_dssp CC-------SSSSEEEECCCC-TTC-SCEEEEEECSS----SCCEEEEECTTTCC
T ss_pred ec-------CCCceEEeeecC-CCC-CEEEEEecCCC----CCCEEEEEECCCCe
Confidence 53 433222111211 233 33443 33332 22468888876654
No 201
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=93.55 E-value=3.6 Score=36.13 Aligned_cols=156 Identities=14% Similarity=0.173 Sum_probs=85.5
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCC---CCCCCCcceeEEE-ECCEEEEEccccCCCCCC
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTG---DVPPPRVGVTMAA-VGHTIYMFGGRDGTHKEL 98 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~---~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 98 (329)
.-+++.+++++|+|-| +.+|+++.....+....... .+|. ...++... .++++|+|=|
T Consensus 265 fDAi~~~~ge~y~Fkg---------~~~wr~~~~~~~~~p~~I~~~Wp~LP~-~iDAa~~~~~~g~~~fFKg-------- 326 (450)
T 1su3_A 265 FDAITTIRGEVMFFKD---------RFYMRTNPFYPEVELNFISVFWPQLPN-GLEAAYEFADRDEVRFFKG-------- 326 (450)
T ss_dssp CSEEEEETTEEEEEET---------TEEEECCTTSSSCEEEEGGGTCTTSCS-SCCEEEEEGGGTEEEEEET--------
T ss_pred cceEEecCCeEEEEeC---------CEEEEEcCCCCcccceehhHhccCCCC-CeeEEEEEcCCCeEEEEeC--------
Confidence 4456668999999988 55777776654443322211 1332 22222222 2689999855
Q ss_pred CceEEEECCCC--cE-EEcc-cCCCCCC--CcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEE-----Eec-
Q 020245 99 NELYSFDTRTN--QW-TLLS-NGDAGPP--HRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI-----QYP- 165 (329)
Q Consensus 99 ~~~~~~d~~~~--~W-~~~~-~~~~~p~--~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~-----~~~- 165 (329)
+.+|+|+..+. .+ +.+. ..+ .|. ..-.++... .++++|+|-| +..|+||..+++-. .+.
T Consensus 327 ~~~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~ 398 (450)
T 1su3_A 327 NKYWAVQGQNVLHGYPKDIYSSFG-FPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAH 398 (450)
T ss_dssp TEEEEEETTEECTTCSEEHHHHHC-CCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHH
T ss_pred CEEEEecCCcccCCCceeeehhhc-CCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhh
Confidence 35788874321 00 1221 111 121 112222222 2689999988 67899998765422 222
Q ss_pred CCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEE
Q 020245 166 SAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~ 212 (329)
..+.. +..--+++..++++|++-| +..|+||..+.+-..
T Consensus 399 ~fpgi--p~~iDAA~~~~g~~YFFkg------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 399 DFPGI--GHKVDAVFMKDGFFYFFHG------TRQYKFDPKTKRILT 437 (450)
T ss_dssp HSTTS--CSCCSEEEEETTEEEEEET------TEEEEEETTTTEEEE
T ss_pred cCCCC--CCCccEEEEcCCeEEEEeC------CEEEEEECCcceEec
Confidence 11111 2222334456899999977 689999987766554
No 202
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.40 E-value=3 Score=34.72 Aligned_cols=151 Identities=9% Similarity=0.032 Sum_probs=75.8
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEE-EEeeCCCCCCCCcc--eeEEEECCEEEEEccccCCCCCCCceEEEEC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWS-VADVTGDVPPPRVG--VTMAAVGHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
++.+++.|+.+ ..+..||..+.+-. .+.... .-.-... ...+..++.+.+.- ....+..||.
T Consensus 47 d~~~l~sg~~D-------g~v~iwd~~~~~~~~~~~~~~-v~~~~~~~~~~s~s~D~~i~~w~-------~~~~~~~~~~ 111 (343)
T 3lrv_A 47 DKWVCMCRCED-------GALHFTQLKDSKTITTITTPN-PRTGGEHPAIISRGPCNRLLLLY-------PGNQITILDS 111 (343)
T ss_dssp EEEEEEEEEET-------TEEEEEEESSSSCEEEEEEEC-CCTTCCCCSEEEECSTTEEEEEE-------TTTEEEEEET
T ss_pred CCCEEEEECCC-------CcEEEEECCCCcEEEEEecCC-ceeeeeCCceEEecCCCeEEEEE-------ccCceEEeec
Confidence 56777777753 57888888765532 222110 1010011 11222234444442 1235666777
Q ss_pred CCCc-EEEcccCCCCCCCcccceeEee--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-E
Q 020245 107 RTNQ-WTLLSNGDAGPPHRSYHSTAAD--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-T 182 (329)
Q Consensus 107 ~~~~-W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~ 182 (329)
.+.+ ........ ...-......- ++.+++.|+.+ ..+..||+.+.+-..+.... ......+++. .
T Consensus 112 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~p 180 (343)
T 3lrv_A 112 KTNKVLREIEVDS---ANEIIYMYGHNEVNTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHK 180 (343)
T ss_dssp TTCCEEEEEECCC---SSCEEEEECCC---CCEEEEEETT-----CCEEEEESSSSCEEEEECCC---SSCCCCEEEECT
T ss_pred CCcceeEEeecCC---CCCEEEEEcCCCCCCCEEEEEeCC-----CcEEEEECCCCcEEEEEecC---CCCceEEEEECC
Confidence 7665 22322110 11111111112 56677777754 46889999888765443321 1212233333 3
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
++.+++.|+.+ ..+..||..+.+-
T Consensus 181 dg~~lasg~~d----g~i~iwd~~~~~~ 204 (343)
T 3lrv_A 181 DSLLLALYSPD----GILDVYNLSSPDQ 204 (343)
T ss_dssp TSCEEEEECTT----SCEEEEESSCTTS
T ss_pred CCCEEEEEcCC----CEEEEEECCCCCC
Confidence 56777777755 5788899877654
No 203
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.28 E-value=2.8 Score=36.28 Aligned_cols=142 Identities=7% Similarity=0.047 Sum_probs=68.9
Q ss_pred EEEEcccCCCcCcceeEEEEcCCCe---EEE--ecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 136 VYIFGGCGVSGRLNDLWGFDVVDRK---WIQ--YPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 136 i~v~GG~~~~~~~~~~~~~~~~~~~---W~~--~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
+++.|+.+ ..+..|++.+.. +.. ..... .....-.+++.. ++.+++.++.+ ..+..||+.+.
T Consensus 196 ~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~d----g~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDD-----HTICLWDINATPKEHRVIDAKNIFT--GHTAVVEDVAWHLLHESLFGSVADD----QKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTT-----SCEEEEETTSCCBGGGEEECSEEEC--CCSSCEEEEEECSSCTTEEEEEETT----SEEEEEETTCS
T ss_pred eEEEEeCC-----CeEEEEeCCCCCCCCceeccceeec--CCCCCEeeeEEeCCCCCEEEEEeCC----CeEEEEECCCC
Confidence 66777654 458888887621 111 11110 112222233332 45677777654 57888998764
Q ss_pred c----eEEeeccCCCCCCcceeEEEEE---CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce--eEeecCCCCCC
Q 020245 209 Q----WAQVETSGEKPTARSVFSTVGI---GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV--WTRWDDGPGSD 279 (329)
Q Consensus 209 ~----w~~~~~~~~~p~~r~~~~~~~~---~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~ 279 (329)
. -..+.. .. ....++.+ +..+++.|+.+ ..|.+||+.... -..+..
T Consensus 265 ~~~~~~~~~~~-----~~-~~v~~i~~~p~~~~~l~tg~~d--------------g~v~vwd~~~~~~~~~~~~~----- 319 (430)
T 2xyi_A 265 NTSKPSHTVDA-----HT-AEVNCLSFNPYSEFILATGSAD--------------KTVALWDLRNLKLKLHSFES----- 319 (430)
T ss_dssp CSSSCSEEEEC-----CS-SCEEEEEECSSCTTEEEEEETT--------------SEEEEEETTCTTSCSEEEEC-----
T ss_pred CCCcceeEeec-----CC-CCeEEEEeCCCCCCEEEEEeCC--------------CeEEEEeCCCCCCCeEEeec-----
Confidence 2 112211 11 11122233 33578777752 368888887531 222221
Q ss_pred CCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 280 HHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 280 ~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
..... .++....+.+.+++.||.+. .|.+||++.
T Consensus 320 ---h~~~v--~~i~~sp~~~~~l~s~~~d~------~i~iwd~~~ 353 (430)
T 2xyi_A 320 ---HKDEI--FQVQWSPHNETILASSGTDR------RLHVWDLSK 353 (430)
T ss_dssp ---CSSCE--EEEEECSSCTTEEEEEETTS------CCEEEEGGG
T ss_pred ---CCCCE--EEEEECCCCCCEEEEEeCCC------cEEEEeCCC
Confidence 11111 23333333245788887653 466666655
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.28 E-value=2.8 Score=34.09 Aligned_cols=194 Identities=12% Similarity=0.113 Sum_probs=92.3
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEE-eeCC-CCCCCCcceeEEE-ECCEEEEEcccc---------CCCCCC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVA-DVTG-DVPPPRVGVTMAA-VGHTIYMFGGRD---------GTHKEL 98 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~-~~~~-~~p~~r~~~~~~~-~~~~iyv~GG~~---------~~~~~~ 98 (329)
++||+.... +.+++||+. .+...+ .... ..+..+ -..++. -++++|+..... ......
T Consensus 83 g~l~v~~~~--------~~l~~~d~~-g~~~~~~~~~~~~~~~~~-~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~ 152 (314)
T 1pjx_A 83 NQLFVADMR--------LGLLVVQTD-GTFEEIAKKDSEGRRMQG-CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF 152 (314)
T ss_dssp SEEEEEETT--------TEEEEEETT-SCEEECCSBCTTSCBCBC-CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred CcEEEEECC--------CCEEEEeCC-CCEEEEEeccCCCccccC-CcCEEECCCCCEEEEecCcccccccccccccCCC
Confidence 688886541 468999998 776655 3211 011111 122222 256788765322 011123
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccceeEe----eCC-eEEEEcccCCCcCcceeEEEEcC-CCeEEEecCCCCCCC
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA----DDR-HVYIFGGCGVSGRLNDLWGFDVV-DRKWIQYPSAGENCK 172 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~----~~~-~i~v~GG~~~~~~~~~~~~~~~~-~~~W~~~~~~~~~~~ 172 (329)
..++++|+. .+...+.... ......+.. -++ .+|+.... ...+++|++. +.+..........+.
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~----~~~~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 153 GSIYCFTTD-GQMIQVDTAF----QFPNGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp EEEEEECTT-SCEEEEEEEE----SSEEEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred CeEEEECCC-CCEEEeccCC----CCcceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCC
Confidence 579999987 5555442211 111122222 233 56666432 1568888876 444322111100011
Q ss_pred C--CCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCce-EEeeccCCCCCCcceeEEEEE-CCE-EEEEcCccCCCC
Q 020245 173 G--RGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQW-AQVETSGEKPTARSVFSTVGI-GKH-IVVYGGEVDPSD 246 (329)
Q Consensus 173 ~--~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w-~~~~~~~~~p~~r~~~~~~~~-~~~-i~i~GG~~~~~~ 246 (329)
. ..-..++. .++.+|+..... ..+.+||+++.+. ..+. .+. ....+++.- ++. ||+....
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~~----~~i~~~d~~~g~~~~~~~----~~~-~~~~~i~~~~dg~~l~v~~~~----- 288 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWGS----SHIEVFGPDGGQPKMRIR----CPF-EKPSNLHFKPQTKTIFVTEHE----- 288 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEETT----TEEEEECTTCBSCSEEEE----CSS-SCEEEEEECTTSSEEEEEETT-----
T ss_pred CCCCCCCceEECCCCCEEEEEcCC----CEEEEEcCCCCcEeEEEe----CCC-CCceeEEECCCCCEEEEEeCC-----
Confidence 1 11122232 257788764322 5789999874433 2232 122 222233222 344 7765532
Q ss_pred CCcCCCCeeeceeEEEEcCCc
Q 020245 247 LGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 247 ~~~~~~~~~~~~~~~~d~~~~ 267 (329)
...+++|+++..
T Consensus 289 ---------~~~l~~~~~~~~ 300 (314)
T 1pjx_A 289 ---------NNAVWKFEWQRN 300 (314)
T ss_dssp ---------TTEEEEEECSSC
T ss_pred ---------CCeEEEEeCCCC
Confidence 247889998754
No 205
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.20 E-value=2.9 Score=34.00 Aligned_cols=107 Identities=12% Similarity=0.099 Sum_probs=53.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC----CEEEEEccccCCCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG----HTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
+++.++.|+.+ ..+..||......+.+.... .....-..+.+. +.+++.|+.+ ..+..+|
T Consensus 20 ~g~~las~s~D-------~~v~iw~~~~~~~~~~~~l~---gH~~~V~~v~~s~~~~g~~l~s~s~D------~~v~iWd 83 (297)
T 2pm7_B 20 YGKRMATCSSD-------KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVMIWK 83 (297)
T ss_dssp TSSEEEEEETT-------SCEEEEEBCSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------TEEEEEE
T ss_pred CCCEEEEEeCC-------CEEEEEecCCCCcEEEEEEc---cccCCeEEEEecCCCcCCEEEEEcCC------CEEEEEE
Confidence 56667777643 56888887644332222211 111111223331 4567777655 4688889
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEee-C--CeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAAD-D--RHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
..+.+|..+..... ....-.++... + +.+++.|+.+ ..+..||+.+.
T Consensus 84 ~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~ 133 (297)
T 2pm7_B 84 EENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKEN 133 (297)
T ss_dssp BSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSS
T ss_pred cCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCC
Confidence 88776654433210 11111112221 1 5666777654 35677777654
No 206
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.11 E-value=3.1 Score=34.13 Aligned_cols=189 Identities=11% Similarity=0.037 Sum_probs=89.2
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcE---EEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEE
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTW---SVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W---~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
+++++.||.+ ..+.++|+.+.+. ....... .....-.++.+ ++++++.|+.+ ..+..++
T Consensus 51 ~~~l~S~s~D-------~~i~vWd~~~~~~~~~~~~~~l~---~h~~~V~~~~~s~dg~~l~s~~~d------~~i~~~~ 114 (340)
T 4aow_A 51 PDMILSASRD-------KTIIMWKLTRDETNYGIPQRALR---GHSHFVSDVVISSDGQFALSGSWD------GTLRLWD 114 (340)
T ss_dssp TTEEEEEETT-------SCEEEEEECCSSSCSEEEEEEEC---CCSSCEEEEEECTTSSEEEEEETT------SEEEEEE
T ss_pred CCEEEEEcCC-------CeEEEEECCCCCcccceeeEEEe---CCCCCEEEEEECCCCCEEEEEccc------ccceEEe
Confidence 4677777743 4577787664432 1121111 11111122222 45666666655 3577778
Q ss_pred CCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE---
Q 020245 106 TRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--- 182 (329)
Q Consensus 106 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--- 182 (329)
............. ............+..++.|+.+ ..+..||.....-....... ...........
T Consensus 115 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 115 LTTGTTTRRFVGH---TKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQDES---HSEWVSCVRFSPNS 183 (340)
T ss_dssp TTTTEEEEEEECC---SSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSS---CSSCEEEEEECSCS
T ss_pred ecccceeeeecCC---CCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEEecc---ccCcccceEEccCC
Confidence 7776554443331 1222222223345566666654 34566776655433333221 11111112221
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEE-ECCEEEEEcCccCCCCCCcCCCCeeeceeEE
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVG-IGKHIVVYGGEVDPSDLGHLGAGKFAGELYS 261 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 261 (329)
.+.+++.++.+ ..+..||..+.+...... . ....-.+++. .++.+++.|+.+ ..+..
T Consensus 184 ~~~~~~s~~~d----~~i~i~d~~~~~~~~~~~--~--h~~~v~~~~~s~~~~~l~s~s~D--------------g~i~i 241 (340)
T 4aow_A 184 SNPIIVSCGWD----KLVKVWNLANCKLKTNHI--G--HTGYLNTVTVSPDGSLCASGGKD--------------GQAML 241 (340)
T ss_dssp SSCEEEEEETT----SCEEEEETTTTEEEEEEC--C--CSSCEEEEEECTTSSEEEEEETT--------------CEEEE
T ss_pred CCcEEEEEcCC----CEEEEEECCCCceeeEec--C--CCCcEEEEEECCCCCEEEEEeCC--------------CeEEE
Confidence 23355566544 467788887765443321 1 1111122222 255677777642 35778
Q ss_pred EEcCCce
Q 020245 262 LDTETLV 268 (329)
Q Consensus 262 ~d~~~~~ 268 (329)
||+.+..
T Consensus 242 wd~~~~~ 248 (340)
T 4aow_A 242 WDLNEGK 248 (340)
T ss_dssp EETTTTE
T ss_pred EEeccCc
Confidence 8887654
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.81 E-value=3.6 Score=34.10 Aligned_cols=111 Identities=12% Similarity=0.087 Sum_probs=61.3
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEE
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI 162 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~ 162 (329)
+.+|+.+... ..+++||+.+++...+... . .-......-++++++... ..+++||+.+++.+
T Consensus 61 ~~l~~~d~~~------~~i~~~d~~~~~~~~~~~~----~-~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHLASGRKTVHALP----F-MGSALAKISDSKQLIASD-------DGLFLRDTATGVLT 122 (326)
T ss_dssp TEEEEEEGGG------TEEEEEETTTTEEEEEECS----S-CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEE
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEECC----C-cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEE
Confidence 5788875433 4799999998876654321 1 112222334778877542 34899999999887
Q ss_pred EecCCCCC-CCCCCCcEEEEECCEEEEEeeeCC--CCcccEEEEeCCCCceEEe
Q 020245 163 QYPSAGEN-CKGRGGPGLIVTQGKIWVVYGFAG--VEVDDVHCFDPAHAQWAQV 213 (329)
Q Consensus 163 ~~~~~~~~-~~~~~~~~~~~~~~~l~v~gG~~~--~~~~~~~~~d~~~~~w~~~ 213 (329)
.+...... +..+.....+.-++++|+...... .....+++++ +.+.+.+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 77554211 011111111223567776432111 1335789998 4555554
No 208
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.80 E-value=3.8 Score=38.33 Aligned_cols=217 Identities=9% Similarity=-0.002 Sum_probs=104.9
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC----cEEEcccCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN----QWTLLSNGDAGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~p 121 (329)
+.+.++++.+.....+.. ....-++++.. ++.||+. ......|+++++.+. .-..+-..+
T Consensus 386 ~~I~~id~~~~~~~~~~~-----~~~~p~gla~d~~~~~Ly~s------D~~~~~I~~~~~~g~~~~~~~~~~i~~~--- 451 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIP-----NLRNVVALDTEVASNRIYWS------DLSQRMICSTQLDRAHGVSSYDTVISRD--- 451 (699)
T ss_dssp TC-CEECTTSCCEECCSC-----CCTTCCCCEEETTTTEEEEC------CTTTTSBEEEESCCCCC-CCCCCBCCSC---
T ss_pred cceEEEeCCCCcceeeec-----cCcceEEEccccccCeEEEE------ecCCCeEEEEecCCCCCCcceEEEEeCC---
Confidence 356677776655543322 12222334443 5789985 334567899988751 111111100
Q ss_pred CCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE--ECCEEEEEeeeCCCCcc
Q 020245 122 PHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV--TQGKIWVVYGFAGVEVD 198 (329)
Q Consensus 122 ~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~l~v~gG~~~~~~~ 198 (329)
..+....++. .+++||+.-. ....|.++++....-..+..... ..+ ..+++ .++.||+..-. ...
T Consensus 452 ~~~P~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~-~~P---~giavDp~~g~ly~td~~---~~~ 519 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQG-SKP---RAIVVDPVHGFMYWTDWG---TPA 519 (699)
T ss_dssp C--CCCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSS-CCC---CCEECCSSSSCCEECCCS---SSC
T ss_pred CCCcceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCC-CCc---ceEEEccCCCcEEEcccC---CCC
Confidence 0111112222 4678888632 22568889888765554433210 011 12222 25678875411 225
Q ss_pred cEEEEeCCCCceEEeeccCCCCCCcceeEEEE--ECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCC
Q 020245 199 DVHCFDPAHAQWAQVETSGEKPTARSVFSTVG--IGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGP 276 (329)
Q Consensus 199 ~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~--~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~ 276 (329)
.|++++++...-+.+... .+..| .++++ .++.||+.-.. ...|+++|+....-+.+..
T Consensus 520 ~I~~~~~dG~~~~~l~~~-~l~~P---nGlavd~~~~~LY~aD~~--------------~~~I~~~d~dG~~~~~~~~-- 579 (699)
T 1n7d_A 520 KIKKGGLNGVDIYSLVTE-NIQWP---NGITLDLLSGRLYWVDSK--------------LHSISSIDVNGGNRKTILE-- 579 (699)
T ss_dssp CEEBCCSSSCCCCEESCS-SCSSC---CCEEECTTTCCEEEEETT--------------TTEEEEECSSSSCCEEECC--
T ss_pred eEEEEeCCCCCeeEEEeC-CCCCc---cEEEEeccCCEEEEEecC--------------CCeEEEEccCCCceEEEEe--
Confidence 788888765443333211 11112 22333 25689987642 3578899987654444432
Q ss_pred CCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecc
Q 020245 277 GSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPC 323 (329)
Q Consensus 277 ~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~ 323 (329)
....++.| .++++.. +.||+.-... +.|.++++.
T Consensus 580 ~~~~~~~P-----~glavd~--~~lywtd~~~------~~V~~~d~~ 613 (699)
T 1n7d_A 580 DEKRLAHP-----FSLAVFE--DKVFWTDIIN------EAIFSANRL 613 (699)
T ss_dssp CSSSCSSC-----CCCEEET--TEEEEECSTT------TCEEEEETT
T ss_pred cCCcCCCc-----eEeEEEC--CEEEEEeCCC------CeEEEEEcc
Confidence 00111111 3455555 4588776322 356666653
No 209
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=92.79 E-value=2.8 Score=32.76 Aligned_cols=142 Identities=17% Similarity=0.371 Sum_probs=76.5
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcE--EEEeeC-CCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEE
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTW--SVADVT-GDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W--~~~~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
.++++|+|-| +.+|+++...... ..+... ..+|. ...++.. .++++|+|=| +.+|+|+
T Consensus 27 ~~g~~yfFkg---------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~IDAA~~-~~~~~yfFkG--------~~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSG---------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVDAAFS-WEDKLYLIQD--------TKVYVFL 87 (219)
T ss_dssp TTSCEEEEET---------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCSEEEE-ETTEEEEEET--------TEEEEEE
T ss_pred CCCcEEEEeC---------CEEEEEcCCCCCCCceEhhhhccCCCC-CccEEEE-ECCcEEEecC--------CEEEEEe
Confidence 4789999987 5577776543222 222221 12442 3444443 4899999965 4589998
Q ss_pred CCCC-cE-----EEccc-CCCCCCC----cccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCC---eEEEecCCCCC
Q 020245 106 TRTN-QW-----TLLSN-GDAGPPH----RSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDR---KWIQYPSAGEN 170 (329)
Q Consensus 106 ~~~~-~W-----~~~~~-~~~~p~~----r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~---~W~~~~~~~~~ 170 (329)
..++ +- +.+.. .+ .|.. +-.++... .++++|+|-| +..|+||..+. .|...+..
T Consensus 88 ~~~~~~~~~gyPk~i~~~~G-~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~--- 156 (219)
T 1hxn_A 88 TKGGYTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWP--- 156 (219)
T ss_dssp CSSSCEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCS---
T ss_pred CCCCceecCCCCeehhhccC-CCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCC---
Confidence 6532 11 12221 11 1222 12222221 3679999988 67899997653 23222221
Q ss_pred CCCCCCcEEEE-----------ECCEEEEEeeeCCCCcccEEEEeCCC
Q 020245 171 CKGRGGPGLIV-----------TQGKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 171 ~~~~~~~~~~~-----------~~~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
......++.. .++.+|++-| +..|+|+..+
T Consensus 157 -p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg------~~y~r~~~~~ 197 (219)
T 1hxn_A 157 -HEKVDGALCMEKPLGPNSCSTSGPNLYLIHG------PNLYCYRHVD 197 (219)
T ss_dssp -CSCCSEEEEESSCSSSCCSCSSSCEEEEEET------TEEEEESSHH
T ss_pred -CCCcCEEEEccccccccceeccCCeEEEEEC------CEEEEEeCCc
Confidence 1222333331 3467898877 6888888743
No 210
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.77 E-value=3.8 Score=38.32 Aligned_cols=150 Identities=12% Similarity=0.089 Sum_probs=80.0
Q ss_pred ECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCC
Q 020245 81 VGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVD 158 (329)
Q Consensus 81 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~ 158 (329)
.++.||+. ......|.++++....-+.+.... ...++ .+++ .++.||+.-- .....|+++++..
T Consensus 463 ~~g~LY~t------D~~~~~I~v~d~dg~~~~~l~~~~-~~~P~---giavDp~~g~ly~td~----~~~~~I~~~~~dG 528 (699)
T 1n7d_A 463 IHSNIYWT------DSVLGTVSVADTKGVKRKTLFREQ-GSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNG 528 (699)
T ss_dssp SSSBCEEC------CTTTSCEEEEBSSSCCEEEECCCS-SCCCC---CEECCSSSSCCEECCC----SSSCCEEBCCSSS
T ss_pred eCCcEEEE------eccCCeEEEEecCCCceEEEEeCC-CCCcc---eEEEccCCCcEEEccc----CCCCeEEEEeCCC
Confidence 35788885 334567899998876544443221 01122 2222 3677887531 1125677777654
Q ss_pred CeEEEecCCCCCCCCCCCcEEEE--ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEE
Q 020245 159 RKWIQYPSAGENCKGRGGPGLIV--TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIV 236 (329)
Q Consensus 159 ~~W~~~~~~~~~~~~~~~~~~~~--~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~ 236 (329)
..-+.+.... .. .-..+++ .+++||+.-. ....|++++++...-+.+.... .......++++.++.||
T Consensus 529 ~~~~~l~~~~---l~-~PnGlavd~~~~~LY~aD~----~~~~I~~~d~dG~~~~~~~~~~--~~~~~P~glavd~~~ly 598 (699)
T 1n7d_A 529 VDIYSLVTEN---IQ-WPNGITLDLLSGRLYWVDS----KLHSISSIDVNGGNRKTILEDE--KRLAHPFSLAVFEDKVF 598 (699)
T ss_dssp CCCCEESCSS---CS-SCCCEEECTTTCCEEEEET----TTTEEEEECSSSSCCEEECCCS--SSCSSCCCCEEETTEEE
T ss_pred CCeeEEEeCC---CC-CccEEEEeccCCEEEEEec----CCCeEEEEccCCCceEEEEecC--CcCCCceEeEEECCEEE
Confidence 4332222111 11 1112333 2577998753 2368999998765444443211 11122345566788999
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
+.-.. ...|.++|..+.+
T Consensus 599 wtd~~--------------~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 599 WTDII--------------NEAIFSANRLTGS 616 (699)
T ss_dssp EECST--------------TTCEEEEETTTEE
T ss_pred EEeCC--------------CCeEEEEEccCCC
Confidence 88642 3578888876544
No 211
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.73 E-value=3.1 Score=33.18 Aligned_cols=196 Identities=11% Similarity=0.034 Sum_probs=106.4
Q ss_pred eeEEEE--CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCC
Q 020245 24 HAITIV--GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELN 99 (329)
Q Consensus 24 ~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 99 (329)
+.++.. ++.||+.-.. .+.+.++|+....-..+.... + ..-+.++.. ++.||+.-. ...
T Consensus 39 ~gi~~d~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~-~---~~p~~ia~d~~~~~lyv~d~------~~~ 101 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-------EPSIGRASLHGGEPTTIIRQD-L---GSPEGIALDHLGRTIFWTDS------QLD 101 (267)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEEESSSCCCEEEECTT-C---CCEEEEEEETTTTEEEEEET------TTT
T ss_pred EEEEEecCCCEEEEEECC-------CCEEEEEecCCCCcEEEEECC-C---CCccEEEEEecCCeEEEEEC------CCC
Confidence 344443 4688887542 267999998866543332211 1 112344443 578998742 346
Q ss_pred ceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcE
Q 020245 100 ELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPG 178 (329)
Q Consensus 100 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 178 (329)
.+.++|+....-+.+...+ ..+....++.- +++||+..... ....++++++....-+.+.... ...-..
T Consensus 102 ~I~~~~~~g~~~~~~~~~~---~~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~----~~~P~g 171 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTG---LVNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDN----LGLPNG 171 (267)
T ss_dssp EEEEEETTSCSCEEEECSS---CSSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTT----CSCEEE
T ss_pred EEEEEEcCCCCEEEEEECC---CCCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECC----CCCCcE
Confidence 7899998754433332221 11222333332 68899875321 1257888887654433332211 112223
Q ss_pred EEEE--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeee
Q 020245 179 LIVT--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFA 256 (329)
Q Consensus 179 ~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~ 256 (329)
++.. ++.||+.-.. .+.++++|++...-..+.. .. ....+++..++.||+.... .
T Consensus 172 ia~d~~~~~lyv~d~~----~~~I~~~~~~g~~~~~~~~--~~---~~P~gi~~d~~~lyva~~~--------------~ 228 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAG----THRAECLNPAQPGRRKVLE--GL---QYPFAVTSYGKNLYYTDWK--------------T 228 (267)
T ss_dssp EEEETTTTEEEEEETT----TTEEEEEETTEEEEEEEEE--CC---CSEEEEEEETTEEEEEETT--------------T
T ss_pred EEEcCCCCEEEEEECC----CCEEEEEecCCCceEEEec--CC---CCceEEEEeCCEEEEEECC--------------C
Confidence 3333 4678887532 2689999987543333322 11 1224555668899997532 2
Q ss_pred ceeEEEEcCCcee
Q 020245 257 GELYSLDTETLVW 269 (329)
Q Consensus 257 ~~~~~~d~~~~~W 269 (329)
+.|.++|+++.+-
T Consensus 229 ~~v~~~d~~~g~~ 241 (267)
T 1npe_A 229 NSVIAMDLAISKE 241 (267)
T ss_dssp TEEEEEETTTTEE
T ss_pred CeEEEEeCCCCCc
Confidence 5789999986654
No 212
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.69 E-value=6.4 Score=36.68 Aligned_cols=127 Identities=17% Similarity=0.164 Sum_probs=72.4
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCC--C---CCCcceeEEEECCEEEEEccccCCCC
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDV--P---PPRVGVTMAAVGHTIYMFGGRDGTHK 96 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--p---~~r~~~~~~~~~~~iyv~GG~~~~~~ 96 (329)
.+-++.+++||+.... +.++.+|..+.+ |+.-...... + ......+.+..+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------ 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF--------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------ 129 (689)
T ss_dssp CCCEEETTEEEEECGG--------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred ecCEEECCEEEEEcCC--------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------
Confidence 3445679999997642 569999988655 7653221100 0 00112334567888888642
Q ss_pred CCCceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEec
Q 020245 97 ELNELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYP 165 (329)
Q Consensus 97 ~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~ 165 (329)
...++.+|..+. .|+.-.............+.++.++.+|+-.+.........++.||..+.+ |+.-.
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 130 -DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp -TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred -CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 247999999876 487654311001112223334568888774332222234679999999875 87653
No 213
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.66 E-value=4.1 Score=34.32 Aligned_cols=165 Identities=14% Similarity=0.063 Sum_probs=79.3
Q ss_pred CCCceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCe-EEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCC
Q 020245 97 ELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRH-VYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGR 174 (329)
Q Consensus 97 ~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 174 (329)
....++.+|+.+.+...+... .....+....- +++ |++............++.+|..+.++..+.... ...
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~---~~~ 238 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA---EGE 238 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC---TTE
T ss_pred CcceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC---CCc
Confidence 345789999998877666532 11222222222 344 544432111112257899999887776665421 011
Q ss_pred CCcEEEE-ECCE-EEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcC-
Q 020245 175 GGPGLIV-TQGK-IWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHL- 250 (329)
Q Consensus 175 ~~~~~~~-~~~~-l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~- 250 (329)
....... -+++ |++.....+.....++.+|+.+.+.+.+... +. .. ....- +++++++.+....-.....
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM---PP--CS-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC---CS--EE-EEEECSSSSEEEEEECCC--------
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC---CC--CC-CCccCCCCceEEEecCCcceeecccc
Confidence 1111222 2455 4443322222223499999988877766532 21 11 22233 5666655432100000000
Q ss_pred -CCCeeeceeEEEEcCCceeEeecC
Q 020245 251 -GAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 251 -~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
........++.+|+++...+.+..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEE
T ss_pred ccccCCCCcEEEEecccCceEEccC
Confidence 000012579999998887766654
No 214
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.59 E-value=3.7 Score=33.71 Aligned_cols=58 Identities=16% Similarity=0.239 Sum_probs=30.8
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--C--CEEEEEccccCCCCCCCceEEEECCCC-cEEEc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--G--HTIYMFGGRDGTHKELNELYSFDTRTN-QWTLL 114 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W~~~ 114 (329)
..+..||+.+.+|..+.... .....-..+.+ + +.+++.|+.+ ..+..+|..+. .|...
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~---~h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHA---GHDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp SCEEEECCSSSCCCEEEEEC---CCSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEEC
T ss_pred CEEEEEECCCCcceEEEEcc---CCCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCccee
Confidence 56888998877765444321 11111122222 2 4566666554 35677777654 46543
No 215
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.51 E-value=6 Score=35.92 Aligned_cols=80 Identities=14% Similarity=0.174 Sum_probs=46.8
Q ss_pred eEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceE
Q 020245 25 AITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELY 102 (329)
Q Consensus 25 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 102 (329)
+.++.+++||+... ...++.+|..+.+ |+.-.... ........+.++.++.+|+-.+.. .......++
T Consensus 110 ~~~~~~~~v~v~~~--------dg~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v~~g~v~vg~~~~-~~~~~g~v~ 179 (571)
T 2ad6_A 110 GLAYGAGQIVKKQA--------NGHLLALDAKTGKINWEVEVCDP-KVGSTLTQAPFVAKDTVLMGCSGA-ELGVRGAVN 179 (571)
T ss_dssp CCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEECCCG-GGTCBCCSCCEEETTEEEEECBCG-GGTCCCEEE
T ss_pred ccEEECCEEEEEeC--------CCEEEEEECCCCCEEEEecCCCC-CccceeccCCEEECCEEEEEecCC-ccCCCCEEE
Confidence 45567889988643 2579999998764 76432210 001122233455788888754322 112245799
Q ss_pred EEECCCC--cEEEc
Q 020245 103 SFDTRTN--QWTLL 114 (329)
Q Consensus 103 ~~d~~~~--~W~~~ 114 (329)
.||..+. .|+.-
T Consensus 180 a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 180 AFDLKTGELKWRAF 193 (571)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEEc
Confidence 9999865 47654
No 216
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.35 E-value=5.1 Score=34.76 Aligned_cols=164 Identities=9% Similarity=-0.020 Sum_probs=79.5
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEE
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI 162 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~ 162 (329)
+++++.|+.+ ..+..||..+.+....-..+ ....-...... ++++++.|+.+ ..+..||..+.+..
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFG--HKHFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCC--CSSCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCEE
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecC--CCCceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcEe
Confidence 6677777654 46888888766533221111 11111222233 67777777754 47889999887643
Q ss_pred EecCCCC---------------------CCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeC--C-CCceEEeeccC
Q 020245 163 QYPSAGE---------------------NCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDP--A-HAQWAQVETSG 217 (329)
Q Consensus 163 ~~~~~~~---------------------~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~--~-~~~w~~~~~~~ 217 (329)
..-.... .........++.. +++.+++++..+ ..+..|+. . ..++..+....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d---~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 276 STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT---KCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC---SEEEEEEECSSSTTCEEEEEEEE
T ss_pred eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC---CeEEEEEeccCCCCceeeccEec
Confidence 3322100 0001111122222 344444443111 46777777 2 23445444221
Q ss_pred CCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe
Q 020245 218 EKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 218 ~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
......+++...+.+++..+...... .....-.++.++.+++.|+.
T Consensus 353 ---~~~~v~~~~~~~~~~~v~~~~~~~~~-----~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 353 ---FPYNVISLSAHNDEFQVTLDNKESSG-----VQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp ---CSSCEEEEEEETTEEEEEECCTTCCS-----SCCCSEEEEEEETTTTEEEE
T ss_pred ---cCCceEEEEecCCcEEEEEecccCCC-----CCCcceEEEEEEcCCCeEEE
Confidence 22223344445567777665432110 00112367888888778753
No 217
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.20 E-value=4.2 Score=33.43 Aligned_cols=143 Identities=10% Similarity=0.040 Sum_probs=71.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEE-EeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEEC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSV-ADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
+++.++.|+.+ ..+..||..+.+-.. +... ...-..+.+ ++.+++.|+.+ ..+..||.
T Consensus 76 dg~~l~s~s~D-------~~v~~wd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~D------~~i~vwd~ 136 (319)
T 3frx_A 76 DGAYALSASWD-------KTLRLWDVATGETYQRFVGH------KSDVMSVDIDKKASMIISGSRD------KTIKVWTI 136 (319)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECC------SSCEEEEEECTTSCEEEEEETT------SCEEEEET
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCCeeEEEccC------CCcEEEEEEcCCCCEEEEEeCC------CeEEEEEC
Confidence 44555555532 678889988765322 2211 111222222 45666777655 35777887
Q ss_pred CCCcEEEcccCCCCCCCcccceeEee-------CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEE
Q 020245 107 RTNQWTLLSNGDAGPPHRSYHSTAAD-------DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGL 179 (329)
Q Consensus 107 ~~~~W~~~~~~~~~p~~r~~~~~~~~-------~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 179 (329)
....-..+... ...-..+... ++.+++.|+.+ ..+..||+.+.+-...-.. ....-.++
T Consensus 137 ~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~----h~~~v~~~ 202 (319)
T 3frx_A 137 KGQCLATLLGH-----NDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEADFIG----HNSNINTL 202 (319)
T ss_dssp TSCEEEEECCC-----SSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEEECC----CCSCEEEE
T ss_pred CCCeEEEEecc-----CCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhheeecC----CCCcEEEE
Confidence 65433332211 0001111111 23355666654 4678888887654332211 11112222
Q ss_pred EE-ECCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 180 IV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 180 ~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
+. .++++++.|+.+ ..+..||..+.+
T Consensus 203 ~~sp~g~~l~s~~~d----g~i~iwd~~~~~ 229 (319)
T 3frx_A 203 TASPDGTLIASAGKD----GEIMLWNLAAKK 229 (319)
T ss_dssp EECTTSSEEEEEETT----CEEEEEETTTTE
T ss_pred EEcCCCCEEEEEeCC----CeEEEEECCCCc
Confidence 32 356677777755 478888887654
No 218
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.06 E-value=5.1 Score=34.09 Aligned_cols=104 Identities=15% Similarity=0.053 Sum_probs=58.5
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
+++.++.|+.+ ..+..||..+.+-...-.. ....-.++... ++..++.|+.+ ..+..||..+.+..
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~s~d----~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSGSGD----RTVRIWDLRTGQCS 200 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEETT----SEEEEEETTTTEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEecCC----CcEEEEECCCCeeE
Confidence 66777777754 4688999988765433221 12222233332 45566666654 57888898776654
Q ss_pred EeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 212 QVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 212 ~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
..... .....+++.. ++.+++.|+.+ ..+..+|+++..
T Consensus 201 ~~~~~-----~~~v~~~~~~~~~~~~l~~~s~d--------------~~v~iwd~~~~~ 240 (393)
T 1erj_A 201 LTLSI-----EDGVTTVAVSPGDGKYIAAGSLD--------------RAVRVWDSETGF 240 (393)
T ss_dssp EEEEC-----SSCEEEEEECSTTCCEEEEEETT--------------SCEEEEETTTCC
T ss_pred EEEEc-----CCCcEEEEEECCCCCEEEEEcCC--------------CcEEEEECCCCc
Confidence 33211 1111222222 55777777642 357788887664
No 219
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.02 E-value=4.5 Score=33.34 Aligned_cols=205 Identities=12% Similarity=-0.017 Sum_probs=102.0
Q ss_pred eeEEEE--CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCC-CCCCCcceeEEEE--CCEEEEEccccC-----
Q 020245 24 HAITIV--GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGD-VPPPRVGVTMAAV--GHTIYMFGGRDG----- 93 (329)
Q Consensus 24 ~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~----- 93 (329)
++++.. +++|||.-.. ..+.++|+.+...+.+..... .+..+ -..++.. ++.||+.-....
T Consensus 83 ~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~g~~~~~~~~~~~~~~~~-p~~i~~d~~~G~l~v~d~~~~~~~~~ 153 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY--------YHLSVVGSEGGHATQLATSVDGVPFKW-LYAVTVDQRTGIVYFTDVSTLYDDRG 153 (322)
T ss_dssp EEEEEETTTTEEEEEETT--------TEEEEECTTCEECEEEESEETTEECSC-EEEEEECTTTCCEEEEESCSSCCTTC
T ss_pred ceEEEcCCCCcEEEEECC--------CCEEEEeCCCCEEEEecccCCCCcccc-cceEEEecCCCEEEEECCcccccccc
Confidence 345555 5689987431 348889988766555432110 11111 1223333 467888642210
Q ss_pred ------CCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCC-eEEEEcccCCCcCcceeEEEEcCCC---eEEE
Q 020245 94 ------THKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDR-HVYIFGGCGVSGRLNDLWGFDVVDR---KWIQ 163 (329)
Q Consensus 94 ------~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~~~---~W~~ 163 (329)
.......+++||+.+.+.+.+..... .....+..-++ .||+.-.. ...+++|++... +.+.
T Consensus 154 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~----~p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~ 224 (322)
T 2fp8_A 154 VQQIMDTSDKTGRLIKYDPSTKETTLLLKELH----VPGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEV 224 (322)
T ss_dssp HHHHHHHTCCCEEEEEEETTTTEEEEEEEEES----CCCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEE
T ss_pred cceehcccCCCceEEEEeCCCCEEEEeccCCc----cCcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccce
Confidence 01123579999998877655432211 11112222244 57776321 257899998752 3443
Q ss_pred ecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCC------CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEE
Q 020245 164 YPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGV------EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIV 236 (329)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~------~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~ 236 (329)
+... + . -..++. .++.+||....... ....+.+||++......+......+ .....+++..+++||
T Consensus 225 ~~~~---~-g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~ 297 (322)
T 2fp8_A 225 LVKI---P-N--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLY 297 (322)
T ss_dssp EEEC---S-S--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEE
T ss_pred EEeC---C-C--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEE
Confidence 3322 1 1 112222 34678887532100 1256899998755454454321111 122233444578999
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
|.... .+.|.+|+++.+
T Consensus 298 v~~~~--------------~~~i~~~~~~~~ 314 (322)
T 2fp8_A 298 IGTLF--------------HGSVGILVYDKK 314 (322)
T ss_dssp EECSS--------------CSEEEEEEC---
T ss_pred EeecC--------------CCceEEEecccc
Confidence 87542 346888887644
No 220
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=91.93 E-value=3.3 Score=31.68 Aligned_cols=105 Identities=23% Similarity=0.389 Sum_probs=60.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcE---EEEeeCC-CCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTW---SVADVTG-DVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSF 104 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W---~~~~~~~-~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 104 (329)
++++|+|-| +.+|+|+..+... +.+.... .+|.....++... .++++|+|-| +..|+|
T Consensus 61 ~g~~yfFkg---------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG--------~~yw~y 123 (196)
T 3c7x_A 61 DGKFVFFKG---------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG--------NKYYRF 123 (196)
T ss_dssp TSCEEEEET---------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET--------TEEEEE
T ss_pred CCcEEEecC---------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC--------CEEEEE
Confidence 678999987 6788888542111 1222211 1443344444433 2579999965 358999
Q ss_pred ECCCCcEE-----EcccCCCCCCCcccceeEee-CC-eEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 105 DTRTNQWT-----LLSNGDAGPPHRSYHSTAAD-DR-HVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 105 d~~~~~W~-----~~~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
|..+++.. .+......|. .-.++... ++ ++|++-| +..++||..+.+
T Consensus 124 d~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 124 NEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp ETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred eCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 98776432 2222222232 22233333 44 8999988 678999998765
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.84 E-value=8.1 Score=35.93 Aligned_cols=82 Identities=17% Similarity=0.237 Sum_probs=48.3
Q ss_pred eEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceE
Q 020245 25 AITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELY 102 (329)
Q Consensus 25 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 102 (329)
+.++.+++||+... ...++.+|..+.+ |+.-.............+.++.++.+|+..+.. .......++
T Consensus 123 ~~a~~~~~v~v~~~--------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~-~~~~~g~v~ 193 (677)
T 1kb0_A 123 GVALWKGKVYVGAW--------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGA-EYGVRGYIT 193 (677)
T ss_dssp CCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCT-TTCCBCEEE
T ss_pred CceEECCEEEEEcC--------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccc-ccCCCCEEE
Confidence 45567888888643 2679999998665 665322010011122334456788888754322 222356799
Q ss_pred EEECCCC--cEEEcc
Q 020245 103 SFDTRTN--QWTLLS 115 (329)
Q Consensus 103 ~~d~~~~--~W~~~~ 115 (329)
.||..+. .|+.-.
T Consensus 194 a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 194 AYDAETGERKWRWFS 208 (677)
T ss_dssp EEETTTCCEEEEEES
T ss_pred EEECCCCcEEEEecc
Confidence 9999876 477644
No 222
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.73 E-value=5.2 Score=33.50 Aligned_cols=166 Identities=10% Similarity=0.008 Sum_probs=82.9
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccceeEe-e--CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCC
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-D--DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRG 175 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 175 (329)
..+..+|+.+.+-...-.. .... -.++.. . ++.+++.|+.+ ..+..||+.+.+....-.. ....
T Consensus 176 ~~v~lwd~~~~~~~~~~~~---h~~~-v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~~~~~~~----h~~~ 242 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHG---HGAD-VLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQCVQAFET----HESD 242 (354)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSC-EEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCEEEEECC----CSSC
T ss_pred CcEEEEeCCCCeEEEEEcC---CCCC-eEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcEEEEecC----CCCC
Confidence 4688889887654322111 0011 111111 1 35677777765 4688999988765443221 1111
Q ss_pred CcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCC
Q 020245 176 GPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGA 252 (329)
Q Consensus 176 ~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~ 252 (329)
-.+++.. ++..++.|+.+ ..+..||+....-...... .........+.+ ++.+++.|+.+
T Consensus 243 v~~v~~~p~~~~l~s~s~D----~~v~lwd~~~~~~~~~~~~---~~~~~~~~~~~~s~~g~~l~~g~~d---------- 305 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDD----ATCRLYDLRADREVAIYSK---ESIIFGASSVDFSLSGRLLFAGYND---------- 305 (354)
T ss_dssp EEEEEECTTSSEEEEEETT----SCEEEEETTTTEEEEEECC---TTCCSCEEEEEECTTSSEEEEEETT----------
T ss_pred eEEEEEeCCCCEEEEEeCC----CeEEEEECCCCcEEEEEcC---CCcccceeEEEEeCCCCEEEEEECC----------
Confidence 2222222 56677777755 4677888876543322211 111122223333 56777777642
Q ss_pred CeeeceeEEEEcCCce-eEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCC
Q 020245 253 GKFAGELYSLDTETLV-WTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSP 309 (329)
Q Consensus 253 ~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~ 309 (329)
..+.+||+.+.. -..+.. ..... .+++...+ +.+++.|+.+.
T Consensus 306 ----~~i~vwd~~~~~~~~~l~~-------h~~~v---~~l~~spd-g~~l~sgs~D~ 348 (354)
T 2pbi_B 306 ----YTINVWDVLKGSRVSILFG-------HENRV---STLRVSPD-GTAFCSGSWDH 348 (354)
T ss_dssp ----SCEEEEETTTCSEEEEECC-------CSSCE---EEEEECTT-SSCEEEEETTS
T ss_pred ----CcEEEEECCCCceEEEEEC-------CCCcE---EEEEECCC-CCEEEEEcCCC
Confidence 368888986543 222221 11111 23333333 45788888653
No 223
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.70 E-value=4.8 Score=32.97 Aligned_cols=201 Identities=8% Similarity=0.016 Sum_probs=100.1
Q ss_pred CCCCcceeEEEE-CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCC
Q 020245 18 PGARSSHAITIV-GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTH 95 (329)
Q Consensus 18 p~~r~~~~~~~~-~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~ 95 (329)
|....-..++.. +++||+.--. ...++++|+... ....... + ..-+.++.. ++++|+.....
T Consensus 29 p~~~~pegia~~~~g~lyv~d~~-------~~~I~~~d~~g~-~~~~~~~---~--~~p~gia~~~dG~l~vad~~~--- 92 (306)
T 2p4o_A 29 PVNTFLENLASAPDGTIFVTNHE-------VGEIVSITPDGN-QQIHATV---E--GKVSGLAFTSNGDLVATGWNA--- 92 (306)
T ss_dssp CTTCCEEEEEECTTSCEEEEETT-------TTEEEEECTTCC-EEEEEEC---S--SEEEEEEECTTSCEEEEEECT---
T ss_pred CCCCCcceEEECCCCCEEEEeCC-------CCeEEEECCCCc-eEEEEeC---C--CCceeEEEcCCCcEEEEeccC---
Confidence 434444455543 5678887532 267999998864 3332221 1 112233332 46788864221
Q ss_pred CCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe---EEEecCCC--C
Q 020245 96 KELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK---WIQYPSAG--E 169 (329)
Q Consensus 96 ~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~---W~~~~~~~--~ 169 (329)
....+++||+.+.+.+.+... +..+.....+. .++.+|+.-- ....++++|+.+.+ |..-.... .
T Consensus 93 -~~~~v~~~d~~~g~~~~~~~~---~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~ 163 (306)
T 2p4o_A 93 -DSIPVVSLVKSDGTVETLLTL---PDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSN 163 (306)
T ss_dssp -TSCEEEEEECTTSCEEEEEEC---TTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSS
T ss_pred -CcceEEEEcCCCCeEEEEEeC---CCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCcccccc
Confidence 112588899888887766554 22333333332 3456676531 12578999987653 21111100 0
Q ss_pred CCCCCCCcE-EEEECCEEEEEeeeCCCCcccEEEEeCCC-Cce---EEeeccCCCCCCcceeEEEEECCEEEEEcCccCC
Q 020245 170 NCKGRGGPG-LIVTQGKIWVVYGFAGVEVDDVHCFDPAH-AQW---AQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDP 244 (329)
Q Consensus 170 ~~~~~~~~~-~~~~~~~l~v~gG~~~~~~~~~~~~d~~~-~~w---~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~ 244 (329)
......... +...++.+|+.-- ..+.+++|+.+. .+. +.+.. ...|+ ..++--++.||+.-..
T Consensus 164 ~~~~~~~pngis~dg~~lyv~d~----~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~--gi~vd~dG~l~va~~~--- 231 (306)
T 2p4o_A 164 SESVFPAANGLKRFGNFLYVSNT----EKMLLLRIPVDSTDKPGEPEIFVE---QTNID--DFAFDVEGNLYGATHI--- 231 (306)
T ss_dssp TTCCSCSEEEEEEETTEEEEEET----TTTEEEEEEBCTTSCBCCCEEEEE---SCCCS--SEEEBTTCCEEEECBT---
T ss_pred ccCCCCcCCCcCcCCCEEEEEeC----CCCEEEEEEeCCCCCCCccEEEec---cCCCC--CeEECCCCCEEEEeCC---
Confidence 001111222 2223457888643 236899999864 221 11111 11111 1222235678887532
Q ss_pred CCCCcCCCCeeeceeEEEEcCC
Q 020245 245 SDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
.+.|.+||++.
T Consensus 232 -----------~~~V~~~~~~G 242 (306)
T 2p4o_A 232 -----------YNSVVRIAPDR 242 (306)
T ss_dssp -----------TCCEEEECTTC
T ss_pred -----------CCeEEEECCCC
Confidence 24688999874
No 224
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.63 E-value=4.9 Score=32.97 Aligned_cols=103 Identities=9% Similarity=0.087 Sum_probs=54.5
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCc----EEEcccCCCCCCCcccceeEeeCCe-EEEEcccCCCcCcceeEEEEc
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQ----WTLLSNGDAGPPHRSYHSTAADDRH-VYIFGGCGVSGRLNDLWGFDV 156 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~----W~~~~~~~~~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~ 156 (329)
++.+++.|+.+ ..+..||..+.. ....... ...-......-+++ +++.|+.+ ..+..||+
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~ 86 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDL 86 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETT-----SCEEEECS
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeec----CCceEEEEECCCCCcEEEEEcCC-----CeEEEEEe
Confidence 34455555543 467777776654 3322211 11111222223567 67777754 46899999
Q ss_pred -CCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCC
Q 020245 157 -VDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 157 -~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
.+.+...+... .....-.++....+.+++.++.+ ..+..||+.
T Consensus 87 ~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~d----~~i~iwd~~ 130 (342)
T 1yfq_A 87 IGSPSFQALTNN---EANLGICRICKYGDDKLIAASWD----GLIEVIDPR 130 (342)
T ss_dssp SSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEETT----SEEEEECHH
T ss_pred ccCCceEecccc---CCCCceEEEEeCCCCEEEEEcCC----CeEEEEccc
Confidence 88876555541 02222233333336666677654 467777765
No 225
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.62 E-value=7.2 Score=34.89 Aligned_cols=149 Identities=5% Similarity=0.029 Sum_probs=72.2
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
+++.++.++.+ ..+..+|.....-..+... ...-...+..-+++.++.|+.+ ..+..||.....-
T Consensus 314 ~~~~l~t~~~d------~~i~~w~~~~~~~~~~~~~----~~~v~~~~~s~~g~~l~~~~~d-----g~v~~~~~~~~~~ 378 (577)
T 2ymu_A 314 DGQTIASASDD------KTVKLWNRNGQHLQTLTGH----SSSVWGVAFSPDGQTIASASDD-----KTVKLWNRNGQLL 378 (577)
T ss_dssp TSSEEEEEETT------SCEEEEETTSCEEEEECCC----SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTCCEE
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeEEEeCC----CCCEEEEEECCCCCEEEEEeCC-----CEEEEEcCCCCEE
Confidence 34555555543 3567778766554443322 1111112222356777777654 3567778655544
Q ss_pred EEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEE-EECCEEEEEc
Q 020245 162 IQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYG 239 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~G 239 (329)
..+... ...-.+++. .+++.++.++.+ ..+..||.....-..+.. ... . -.+++ ..++++++.+
T Consensus 379 ~~~~~~-----~~~v~~~~~s~dg~~l~~~~~d----~~v~~~~~~~~~~~~~~~---~~~-~-v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 379 QTLTGH-----SSSVRGVAFSPDGQTIASASDD----KTVKLWNRNGQLLQTLTG---HSS-S-VWGVAFSPDDQTIASA 444 (577)
T ss_dssp EEEECC-----SSCEEEEEECTTSSCEEEEETT----SEEEEECTTCCEEEEEEC---CSS-C-EEEEEECTTSSEEEEE
T ss_pred EEecCC-----CCCeEEEEECCCCCEEEEEeCC----CEEEEEeCCCCEEEEecC---CCC-C-eEEEEECCCCCEEEEE
Confidence 444322 111122222 356666666644 467777764433333321 111 1 11222 2255666666
Q ss_pred CccCCCCCCcCCCCeeeceeEEEEcCCceeEeec
Q 020245 240 GEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWD 273 (329)
Q Consensus 240 G~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 273 (329)
+.+ ..+..+|.....-..+.
T Consensus 445 ~~d--------------~~v~~w~~~~~~~~~~~ 464 (577)
T 2ymu_A 445 SDD--------------KTVKLWNRNGQLLQTLT 464 (577)
T ss_dssp ETT--------------SEEEEEETTSCEEEEEE
T ss_pred cCC--------------CEEEEEECCCCEEEEEc
Confidence 532 35777887766555554
No 226
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.51 E-value=5.7 Score=35.84 Aligned_cols=99 Identities=9% Similarity=-0.054 Sum_probs=54.1
Q ss_pred ceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccce
Q 020245 49 NLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHS 128 (329)
Q Consensus 49 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~ 128 (329)
.+..||+.+.+-+++.... . ......-+++.+++++... .....++.+|+.+.+.+.+.... ......
T Consensus 133 ~~~l~d~~~g~~~~l~~~~---~---~~~~~spDG~~la~~~~~~--~~~~~i~~~d~~~g~~~~l~~~~----~~~~~~ 200 (582)
T 3o4h_A 133 RVALYALDGGGLRELARLP---G---FGFVSDIRGDLIAGLGFFG--GGRVSLFTSNLSSGGLRVFDSGE----GSFSSA 200 (582)
T ss_dssp CEEEEEEETTEEEEEEEES---S---CEEEEEEETTEEEEEEEEE--TTEEEEEEEETTTCCCEEECCSS----CEEEEE
T ss_pred CceEEEccCCcEEEeecCC---C---ceEEECCCCCEEEEEEEcC--CCCeEEEEEcCCCCCceEeecCC----Cccccc
Confidence 3447788887766665421 1 2223333454444443331 11245999999998888764331 111222
Q ss_pred eEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEE
Q 020245 129 TAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI 162 (329)
Q Consensus 129 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~ 162 (329)
...-+++.++.+..+. ...++++|+.+++..
T Consensus 201 ~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 201 SISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp EECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred eECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 2223555544433222 257999999998877
No 227
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=91.39 E-value=6.3 Score=33.77 Aligned_cols=182 Identities=10% Similarity=0.073 Sum_probs=102.5
Q ss_pred CCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECC-------CCcEEEcccCCCCCCCccccee
Q 020245 57 TLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTR-------TNQWTLLSNGDAGPPHRSYHST 129 (329)
Q Consensus 57 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~-------~~~W~~~~~~~~~p~~r~~~~~ 129 (329)
.+.|+...... .|....-|+.+.+++.-|.+|=.+ .+...+++-.+-.. .-.=+.++..- ...-+..++
T Consensus 269 ~spW~~t~L~~-i~~vTe~HSFa~i~~~~fa~GyHn-GDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey--~~~AsEPCv 344 (670)
T 3ju4_A 269 KSPWRKTDLGL-IPSVTEVHSFATIDNNGFAMGYHQ-GDVAPREVGLFYFPDAFNSPSNYVRRQIPSEY--EPDASEPCI 344 (670)
T ss_dssp TSCCEEEECCS-CTTCSEEEEEEECSSSCEEEEEEE-CSSSSCEEEEEEETTTTTCTTCCEEEECCGGG--CTTEEEEEE
T ss_pred cCCceeccccc-ccceeeeeeeeEecCCceEEEecc-CCCCcceeeEEEecccccCCcceeeeechhhh--ccccccchh
Confidence 45676655544 677788899999999888887555 44444454443221 11223333321 112233455
Q ss_pred EeeCCeEEEEc-ccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeC----------CC---
Q 020245 130 AADDRHVYIFG-GCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFA----------GV--- 195 (329)
Q Consensus 130 ~~~~~~i~v~G-G~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~----------~~--- 195 (329)
-.+++.||++- |......-.++.+-+..-+.|+.+.-... .-....-.+.+++.||++|... +.
T Consensus 345 kyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~n--vHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~ 422 (670)
T 3ju4_A 345 KYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHN--VHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYK 422 (670)
T ss_dssp EEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTC--CCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSS
T ss_pred hhhCCEEEEEecCcCCCCCcceeeeecccCCchhheecccc--ccccCCCcceeCCEEEEEeccccccccccCCCccccc
Confidence 56799999983 44444444667778888889999875421 1222333467899999998632 11
Q ss_pred ---CcccEEEEeC-----CCCceEEeeccC---CCCCCcceeEEEEE-CCE-EEEEcCccCC
Q 020245 196 ---EVDDVHCFDP-----AHAQWAQVETSG---EKPTARSVFSTVGI-GKH-IVVYGGEVDP 244 (329)
Q Consensus 196 ---~~~~~~~~d~-----~~~~w~~~~~~~---~~p~~r~~~~~~~~-~~~-i~i~GG~~~~ 244 (329)
+-.-+.+.+. +.-+|..+..+. .......+.+.+.+ ++. -|||||.+.-
T Consensus 423 a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~ 484 (670)
T 3ju4_A 423 ASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHF 484 (670)
T ss_dssp CBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSC
T ss_pred ccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccC
Confidence 1111223332 455787776532 22233344444444 664 5678887754
No 228
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=90.96 E-value=4.6 Score=31.48 Aligned_cols=152 Identities=14% Similarity=0.224 Sum_probs=80.1
Q ss_pred eEEEECCEEEEEccccCCCCCCCceEEEECCCCc-E--EEcccC-CCCCCCcccceeEe-eCCeEEEEcccCCCcCccee
Q 020245 77 TMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQ-W--TLLSNG-DAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDL 151 (329)
Q Consensus 77 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W--~~~~~~-~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 151 (329)
+++.+.+++|+|=|. .+|+++..... . ..+... +..|.. -.++... .++++|+|-| +..
T Consensus 35 Ai~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~lp~~-IDAA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp EEEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTTSCSC-CSEEEEETTTTEEEEEET-------TEE
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCCCCCC-ccEEEEECCCCEEEEEeC-------CEE
Confidence 445678999999653 47777654321 1 122222 222322 2222222 3689999988 678
Q ss_pred EEEEcCC---CeEEEecCCCCCCCC-CCCcEEEE--ECCEEEEEeeeCCCCcccEEEEeCCCCceEE-----eeccCCCC
Q 020245 152 WGFDVVD---RKWIQYPSAGENCKG-RGGPGLIV--TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ-----VETSGEKP 220 (329)
Q Consensus 152 ~~~~~~~---~~W~~~~~~~~~~~~-~~~~~~~~--~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~-----~~~~~~~p 220 (329)
|+|+..+ +-=..+..... |.. ..-.++.. .++++|++-| +..|+||..+.+-.. +.. .-+.
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~-p~~~~~IDAAf~~~~~g~~YfFkG------~~ywr~d~~~~~v~~gyPr~i~~-~w~g 170 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGL-PPDVQRVDAAFNWSKNKKTYIFAG------DKFWRYNEVKKKMDPGFPKLIAD-AWNA 170 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTC-CTTCCCCSEEEEETTTTEEEEEET------TEEEEEETTTTEECSSCCEEHHH-HSSS
T ss_pred EEEcCccccCCCCccHhhcCC-CCCcCCccEEEEEcCCCeEEEEEC------CEEEEEECccccccCCCCcchhh-ccCC
Confidence 8888531 11122222111 111 11223333 3689999977 689999986653211 110 0001
Q ss_pred CCcceeEEEEEC--CEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 221 TARSVFSTVGIG--KHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 221 ~~r~~~~~~~~~--~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
.+..-.++...+ +.+|++=| +..|+||.....
T Consensus 171 ~p~~idaAf~~~~~g~~YfFkg----------------~~y~~~~~~~~~ 204 (218)
T 1gen_A 171 IPDNLDAVVDLQGGGHSYFFKG----------------AYYLKLENQSLK 204 (218)
T ss_dssp CCSSCSEEEECTTTCEEEEEET----------------TEEEEEETTEEE
T ss_pred CCCCCCEEEEEcCCCcEEEEEC----------------CEEEEEECCcee
Confidence 222233444544 79999977 368899887654
No 229
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.77 E-value=5.8 Score=32.28 Aligned_cols=107 Identities=14% Similarity=0.139 Sum_probs=53.5
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCC--cEEEEeeCCCCCCCCcceeEEEE----CCEEEEEccccCCCCCCCceEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETL--TWSVADVTGDVPPPRVGVTMAAV----GHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
++++++.|+.+ ..+..||..+. .++.+.... .....-.++.+ ++.+++.|+.+ ..+..
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~d~~~l~s~~~d------g~v~v 85 (351)
T 3f3f_A 22 YGRHVATCSSD-------QHIKVFKLDKDTSNWELSDSWR---AHDSSIVAIDWASPEYGRIIASASYD------KTVKL 85 (351)
T ss_dssp SSSEEEEEETT-------SEEEEEEECSSSCCEEEEEEEE---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEE
T ss_pred CCCEEEEeeCC-------CeEEEEECCCCCCcceecceec---cCCCcEEEEEEcCCCCCCEEEEEcCC------CeEEE
Confidence 45666666542 56777887643 344433321 11122223333 25677777655 46777
Q ss_pred EECCCC-------cEEEcccCCCCCCCcccceeEee-C--CeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 104 FDTRTN-------QWTLLSNGDAGPPHRSYHSTAAD-D--RHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 104 ~d~~~~-------~W~~~~~~~~~p~~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
||..+. .|..+..... ....-.++... + +.+++.|+.+ ..+..||+.+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~ 144 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEP 144 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSST
T ss_pred EecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCCh
Confidence 877653 3343333311 11111122222 3 6677777654 46888887765
No 230
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=90.34 E-value=4.9 Score=30.73 Aligned_cols=153 Identities=10% Similarity=0.135 Sum_probs=83.2
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc---EEEEeeC-CCCCCCCcceeEEEECCEEEEEccccCCCCCCC
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT---WSVADVT-GDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELN 99 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~---W~~~~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 99 (329)
-+++.+++++|+|-| +.+|+++..... =+.+... ..+|. ...++....++++|+|-| +
T Consensus 9 DA~~~~~g~~~fFkg---------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg--------~ 70 (196)
T 3c7x_A 9 DTVAMLRGEMFVFKE---------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG--------D 70 (196)
T ss_dssp SEEEEETTEEEEEET---------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET--------T
T ss_pred cEEEEcCCEEEEEEC---------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC--------C
Confidence 345567999999998 568887643100 0222211 12443 344433334678999865 4
Q ss_pred ceEEEECCCCcE---EEcccCC-CCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEE-----EecCCCC
Q 020245 100 ELYSFDTRTNQW---TLLSNGD-AGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI-----QYPSAGE 169 (329)
Q Consensus 100 ~~~~~d~~~~~W---~~~~~~~-~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~-----~~~~~~~ 169 (329)
.+|+|+..+... +.+.... ..|...-.++... .++++|+|-| +..++||..+++-. .+..-+.
T Consensus 71 ~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~g 143 (196)
T 3c7x_A 71 KHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEG 143 (196)
T ss_dssp EEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBT
T ss_pred EEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCC
Confidence 578888542110 2333321 1232222222222 3689999988 57899998876432 2221111
Q ss_pred CCCCCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 170 NCKGRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 170 ~~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
.| ..-.++... ++ ++|++-| +..|+||..+.+
T Consensus 144 ip--~~idaAf~~~~~~~~YfFkg------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 144 IP--ESPRGSFMGSDEVFTYFYKG------NKYWKFNNQKLK 177 (196)
T ss_dssp CC--SSCSEEEECTTSSEEEEEET------TEEEEEETTTTE
T ss_pred cC--CCcceeEEecCCCEEEEEEC------CEEEEEECCcce
Confidence 11 222333333 44 8999977 689999987654
No 231
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=90.18 E-value=7.9 Score=32.88 Aligned_cols=154 Identities=11% Similarity=0.121 Sum_probs=80.4
Q ss_pred eEEEECCEEEEEccccCCCCCCCceEEEECCCCcE--EEcccC-CCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeE
Q 020245 77 TMAAVGHTIYMFGGRDGTHKELNELYSFDTRTNQW--TLLSNG-DAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLW 152 (329)
Q Consensus 77 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W--~~~~~~-~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 152 (329)
+++.+++++|+|=| +.+|+++.....- ..+... +..|... .++... .++++|+|-| +.+|
T Consensus 185 Av~~~~g~~~fFkg--------~~~Wr~~~~~~~~~p~~I~~~wpgLP~~i-DAa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD--------RFFWLKVSERPKTSVNLISSLWPTLPSGI-EAAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET--------TEEEECCSSCCCCCEEEHHHHCSSCCSSC-CEEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC--------CEEEEEcCCCccCCccchhhhccCCCCCc-cEEEEecCCCEEEEEeC-------CEEE
Confidence 34567899999855 3466665443211 122111 2223222 222222 3789999977 4567
Q ss_pred EEEcCCCe---EEEecCCCCCCCC--CCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEE-----eeccCCCC-
Q 020245 153 GFDVVDRK---WIQYPSAGENCKG--RGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ-----VETSGEKP- 220 (329)
Q Consensus 153 ~~~~~~~~---W~~~~~~~~~~~~--~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~-----~~~~~~~p- 220 (329)
+|+..... -..+...+ .|.. ....+... .++++|++-| +..|+||..+.+-.. +.. ..|
T Consensus 249 r~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG------~~yw~yd~~~~~v~~gyPk~I~~--~f~g 319 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVD------NQYWRYDERRQMMDPGYPKLITK--NFQG 319 (365)
T ss_dssp ECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEET------TEEEEEETTTTEECSSCCCCHHH--HSTT
T ss_pred EEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEEC------CEEEEEeCCcceecCCCCcchhh--cCCC
Confidence 77543211 12232221 1221 22233222 2578999977 689999986543211 100 011
Q ss_pred CCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe
Q 020245 221 TARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 221 ~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
.+..--+++.. ++++|++=| +..|+||..+.+-..
T Consensus 320 ~p~~iDaA~~~~~g~~YfFkg----------------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 320 IGPKIDAVFYSKNKYYYFFQG----------------SNQFEYDFLLQRITK 355 (365)
T ss_dssp CCSSCSEEEEETTTEEEEEET----------------TEEEEEETTTTEEEE
T ss_pred CCCccceeeEecCCcEEEEeC----------------CEEEEEECCccEEec
Confidence 22223344445 778999877 479999998876544
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=90.12 E-value=0.38 Score=41.10 Aligned_cols=140 Identities=16% Similarity=0.241 Sum_probs=55.2
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEEC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
.++.||+.+. ...++.+|..+.+ |+.-. . . ...+.+..++.+|+.++.+ ..++.+|.
T Consensus 8 ~~~~v~~gs~--------dg~v~a~d~~tG~~~W~~~~--~---~--~~s~p~~~~g~~~v~~s~d------g~l~a~d~ 66 (369)
T 2hz6_A 8 PETLLFVSTL--------DGSLHAVSKRTGSIKWTLKE--D---P--VLQVPTHVEEPAFLPDPND------GSLYTLGS 66 (369)
T ss_dssp CTTEEEEEET--------TSEEEEEETTTCCEEEEEEC--C---C--SCCCC-----CCEEECTTT------CCEEEC--
T ss_pred eCCEEEEEcC--------CCEEEEEECCCCCEEEEecC--C---C--ceecceEcCCCEEEEeCCC------CEEEEEEC
Confidence 4567776543 1579999988655 65432 1 1 1122334566677775433 46889998
Q ss_pred CCC--cEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEecCCCCCCCCCCCcEEEE
Q 020245 107 RTN--QWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPSAGENCKGRGGPGLIV 181 (329)
Q Consensus 107 ~~~--~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~ 181 (329)
.+. .|+.-... +. ....+.+. .++.+|+ |+.+ ..++.+|+.+++ |+.-.... . ..+-
T Consensus 67 ~tG~~~w~~~~~~---~~-~~~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~----~----~~~p 128 (369)
T 2hz6_A 67 KNNEGLTKLPFTI---PE-LVQASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA----D----SLSP 128 (369)
T ss_dssp ---CCSEECSCCH---HH-HHTTCSCC-----CCC-CEEE-----EEEEEECCC--------------------------
T ss_pred CCCceeeeeeccC---cc-ccccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc----c----cccc
Confidence 654 45532111 00 00111122 3444443 3321 468889888764 55432211 0 0111
Q ss_pred ECCEEEEEeeeCCCCcccEEEEeCCCC--ceEE
Q 020245 182 TQGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQ 212 (329)
Q Consensus 182 ~~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~ 212 (329)
.++.+|+ +..+ ..++.+|.++. .|+.
T Consensus 129 ~~~~v~~-~~~d----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 129 STSLLYL-GRTE----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp ----EEE-EEEE----EEEECCCSSSSSCCCEE
T ss_pred cCCEEEE-EecC----CEEEEEECCCCCEEEeE
Confidence 3444554 4332 46778887654 3764
No 233
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=90.01 E-value=13 Score=34.93 Aligned_cols=151 Identities=15% Similarity=0.122 Sum_probs=82.7
Q ss_pred CCCceEEEECCCC--c-EEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCC--CeEEEecCCCCCC
Q 020245 97 ELNELYSFDTRTN--Q-WTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVD--RKWIQYPSAGENC 171 (329)
Q Consensus 97 ~~~~~~~~d~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~--~~W~~~~~~~~~~ 171 (329)
..++++.+|..+. . |+.+.... ..... .....++.||+..... .....++.+|+.+ ..|+.+.+..
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~~-~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~--- 362 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDL---KAQWD-FVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPES--- 362 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSS---SSCEE-EEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCC---
T ss_pred CcceEEEEECCCCCCcccEEecCCC---CceEE-EEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCC---
Confidence 4668999998876 6 87776542 11221 2224566777765432 2346789999988 5798887542
Q ss_pred CCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEE-EECC-EEEEEcCccCCCCCCc
Q 020245 172 KGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTV-GIGK-HIVVYGGEVDPSDLGH 249 (329)
Q Consensus 172 ~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~-~i~i~GG~~~~~~~~~ 249 (329)
.. ....+...++.+++....++ ...++.++.....-+.+. .|......... .-++ .|++... +.
T Consensus 363 ~~-~l~~~~~~~~~lv~~~~~dg--~~~l~~~~~~g~~~~~l~----~~~~~~v~~~~~s~d~~~l~~~~s-s~------ 428 (741)
T 1yr2_A 363 KD-NLESVGIAGNRLFASYIHDA--KSQVLAFDLDGKPAGAVS----LPGIGSASGLSGRPGDRHAYLSFS-SF------ 428 (741)
T ss_dssp SS-EEEEEEEEBTEEEEEEEETT--EEEEEEEETTSCEEEECB----CSSSCEEEEEECCBTCSCEEEEEE-ET------
T ss_pred CC-eEEEEEEECCEEEEEEEECC--EEEEEEEeCCCCceeecc----CCCCeEEEEeecCCCCCEEEEEEc-CC------
Confidence 11 11223345777777765432 367888887544333332 22221111111 1133 3443321 11
Q ss_pred CCCCeeeceeEEEEcCCceeEeecC
Q 020245 250 LGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 250 ~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
.....++.||+.+.+.+.+..
T Consensus 429 ----~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 429 ----TQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp ----TEEEEEEEEETTTTEEEECSC
T ss_pred ----CCCCEEEEEECCCCcEEEEec
Confidence 113578999998877766643
No 234
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.85 E-value=9 Score=33.01 Aligned_cols=152 Identities=8% Similarity=0.060 Sum_probs=80.9
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
+++||+... ....+.++|+.+++-..+..... . .+.+... ++.||+...... ..++.+++.+..
T Consensus 141 ~g~lyv~d~------~~~~I~~id~~~g~~~~~~~~~~--~---~~ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~ 205 (409)
T 3hrp_A 141 NNTVLAYQR------DDPRVRLISVDDNKVTTVHPGFK--G---GKPAVTKDKQRVYSIGWEGT----HTVYVYMKASGW 205 (409)
T ss_dssp TTEEEEEET------TTTEEEEEETTTTEEEEEEETCC--B---CBCEECTTSSEEEEEBSSTT----CEEEEEEGGGTT
T ss_pred CCCEEEEec------CCCcEEEEECCCCEEEEeeccCC--C---CceeEecCCCcEEEEecCCC----ceEEEEEcCCCc
Confidence 568999753 23579999999877666544321 1 1222222 345666543221 278999987653
Q ss_pred -EEEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcce-e-EEEEE--CC
Q 020245 161 -WIQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSV-F-STVGI--GK 233 (329)
Q Consensus 161 -W~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~-~-~~~~~--~~ 233 (329)
...+...... ....-+.++.. ++.||+... ...+++||+++.....+............ . .++.. ++
T Consensus 206 ~~~~~g~~~~~-~~~~p~~iav~p~~g~lyv~d~-----~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 206 APTRIGQLGST-FSGKIGAVALDETEEWLYFVDS-----NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp CEEEEEECCTT-SCSCCCBCEECTTSSEEEEECT-----TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred eeEEeeeccch-hcCCcEEEEEeCCCCeEEEEEC-----CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 2333211100 11112223332 578888422 25799999987775555221111111111 1 34333 57
Q ss_pred EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCce
Q 020245 234 HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLV 268 (329)
Q Consensus 234 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (329)
.||+.... .+.|+++|.....
T Consensus 280 ~lyv~d~~--------------~~~I~~~~~~g~~ 300 (409)
T 3hrp_A 280 NFYMSDQN--------------LSSVYKITPDGEC 300 (409)
T ss_dssp EEEEEETT--------------TTEEEEECTTCCE
T ss_pred EEEEEeCC--------------CCEEEEEecCCCE
Confidence 89987542 3578899887653
No 235
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.84 E-value=14 Score=35.13 Aligned_cols=174 Identities=11% Similarity=0.125 Sum_probs=95.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCC----cEEEEeeCCCCCCCCcceeEEE--ECCEEEEEccccCCCCCCCceEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETL----TWSVADVTGDVPPPRVGVTMAA--VGHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
+++||+.-.. .+.|+++++... ....+.... +..+ ..+++ ++++||+.- .....|++
T Consensus 435 ~~~lY~sD~~-------~~~I~~~~l~g~~~~~~~~~vi~~~-l~~P---~GLAvD~~~~~LY~tD------~~~~~I~v 497 (791)
T 3m0c_C 435 SNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRD-IQAP---DGLAVDWIHSNIYWTD------SVLGTVSV 497 (791)
T ss_dssp TTEEEEEETT-------TTEEEEEEC--------CEEEECSS-CSCC---CEEEEETTTTEEEEEE------TTTTEEEE
T ss_pred CCeeEEeecc-------ceeEEEEeccCCCCCcceeEEEecC-CCCc---ceeeeeecCCcEEEEe------cCCCeEEE
Confidence 4678876542 156777777642 222222211 1111 23333 357899963 34568999
Q ss_pred EECCCCcEEEcccCCCCCCCcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcE-EE
Q 020245 104 FDTRTNQWTLLSNGDAGPPHRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPG-LI 180 (329)
Q Consensus 104 ~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~ 180 (329)
+++....-+.+.... ...|+ .+++ .++.||+.-- .....|+++++....-..+... ...... ++
T Consensus 498 ~~ldG~~~~~l~~~~-l~~P~---gIaVDp~~g~LYwtD~----g~~~~I~~~~~dG~~~~~lv~~-----~l~~P~GLa 564 (791)
T 3m0c_C 498 ADTKGVKRKTLFREN-GSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTE-----NIQWPNGIT 564 (791)
T ss_dssp EETTSSSEEEEEECT-TCCEE---EEEEETTTTEEEEEEC----SSSCEEEEEETTSCCEEEEECS-----SCSCEEEEE
T ss_pred EeCCCCeEEEEEeCC-CCCcc---eEEEecCCCCEEEecC----CCCCeEEEEecCCCceEEEEeC-----CCCCceEEE
Confidence 999876555443321 01122 2333 3678998741 1125789999876655444432 122222 33
Q ss_pred E--ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeecc-CCCCCCcceeEEEEECCEEEEEcC
Q 020245 181 V--TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETS-GEKPTARSVFSTVGIGKHIVVYGG 240 (329)
Q Consensus 181 ~--~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~-~~~p~~r~~~~~~~~~~~i~i~GG 240 (329)
+ .+++||+.-. ....|++++++...-+.+... ..++ ..+++++.++.||+.-.
T Consensus 565 vD~~~~~LYwaD~----~~~~I~~~d~dG~~~~~v~~~~~~l~---~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 565 LDLLSGRLYWVDS----KLHSISSIDVNGGNRKTILEDEKRLA---HPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp EETTTTEEEEEET----TTTEEEEEETTSCSCEEEEECTTTTS---SEEEEEEETTEEEEEET
T ss_pred EecCCCeEEEEeC----CCCcEEEEecCCCceEEEecCCCccC---CCCEEEEeCCEEEEEEC
Confidence 2 3688998743 336899999876555444432 1222 34567778889999864
No 236
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=89.81 E-value=6 Score=30.98 Aligned_cols=148 Identities=13% Similarity=0.168 Sum_probs=78.2
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeC------CCCcEEEEeeC---CCCCC-----CCcceeEEEECCEEEEEccccCC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDL------ETLTWSVADVT---GDVPP-----PRVGVTMAAVGHTIYMFGGRDGT 94 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~------~~~~W~~~~~~---~~~p~-----~r~~~~~~~~~~~iyv~GG~~~~ 94 (329)
.++++|+|-| +.+|+++. ........... ..+|. ....++....++++|+|=|
T Consensus 12 ~~ge~~fFk~---------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg---- 78 (225)
T 3oyo_A 12 SEYEVYFFAK---------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG---- 78 (225)
T ss_dssp STTEEEEEET---------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET----
T ss_pred CCCEEEEEEC---------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC----
Confidence 3789999987 56888872 11111111100 11331 2333333235789999965
Q ss_pred CCCCCceEEEECCC----CcEEE----ccc-CCCCCCC----cccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 95 HKELNELYSFDTRT----NQWTL----LSN-GDAGPPH----RSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 95 ~~~~~~~~~~d~~~----~~W~~----~~~-~~~~p~~----r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
+.+|+||..+ ..... +.. .+..|.. .-.++.. ..++++|+|-| +..|+||..+++
T Consensus 79 ----~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~ 147 (225)
T 3oyo_A 79 ----NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQ 147 (225)
T ss_dssp ----TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTE
T ss_pred ----CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCe
Confidence 4589997632 22211 111 1112221 1222222 13789999988 678999987776
Q ss_pred EEE----ecC-CCCC---CCCCCCcEEEE--ECCEEEEEeeeCCCCcccEEEEeCC
Q 020245 161 WIQ----YPS-AGEN---CKGRGGPGLIV--TQGKIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 161 W~~----~~~-~~~~---~~~~~~~~~~~--~~~~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
... +.. .+.. ..+..--++.. .++++|++-| +..|+||..
T Consensus 148 ~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG------~~ywr~d~~ 197 (225)
T 3oyo_A 148 LVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG------QNYVRIDFT 197 (225)
T ss_dssp EEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET------TEEEEEECC
T ss_pred ecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC------CEEEEEeCC
Confidence 554 111 1100 00222233333 3789999987 689999987
No 237
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.73 E-value=9.1 Score=32.89 Aligned_cols=204 Identities=9% Similarity=-0.011 Sum_probs=106.8
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC----cEEEcccCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN----QWTLLSNGDAGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~p 121 (329)
+.+.++|+....+..+... ...-.+++.. ++.||+.- .....++++++... ....+....
T Consensus 92 ~~I~~i~l~~~~~~~~~~~-----~~~~~~l~~d~~~~~lywsD------~~~~~I~~~~~~g~~~~~~~~~~~~~~--- 157 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSD------LSQRMICSTQLDRAHGVSSYDTVISRD--- 157 (400)
T ss_dssp TEEEEECTTSCSCEEEECS-----CSCEEEEEEETTTTEEEEEE------TTTTEEEEEEC------CCCEEEECSS---
T ss_pred ceeEEEccCCcceeEeccc-----cCcceEEeeeeccCceEEEe------cCCCeEEEEEcccCCCCCcceEEEeCC---
Confidence 5677788777666655431 2222334443 57899863 33467888888652 222222211
Q ss_pred CCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCc-EEEE--ECCEEEEEeeeCCCCc
Q 020245 122 PHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGP-GLIV--TQGKIWVVYGFAGVEV 197 (329)
Q Consensus 122 ~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~--~~~~l~v~gG~~~~~~ 197 (329)
.......++. .+++||+.-.. ...++++++....-..+... ..... .+++ .++.||+.-.. ..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~-----~~~~P~~iavdp~~g~ly~td~~---~~ 224 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWG---TP 224 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEEC-----SSCCEEEEEEETTTTEEEEEECS---SS
T ss_pred CCCcccEEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeC-----CCCCcceEEEecccCeEEEEeCC---CC
Confidence 1111222222 47899998432 25788888887655444432 11112 2333 25788887521 12
Q ss_pred ccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCC
Q 020245 198 DDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDG 275 (329)
Q Consensus 198 ~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 275 (329)
..+++++++...-+.+... .+ ....++++- ++.||+.-.. ...|+++|++...-+.+..
T Consensus 225 ~~I~~~~~dG~~~~~~~~~-~l---~~P~glavd~~~~~lY~aD~~--------------~~~I~~~d~dG~~~~~~~~- 285 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVDSK--------------LHSISSIDVNGGNRKTILE- 285 (400)
T ss_dssp CCEEEEETTSCSCEEEECS-SC---SCEEEEEEETTTTEEEEEETT--------------TTEEEEEETTSCCCEEEEE-
T ss_pred CEEEEEeCCCCccEEEEEC-CC---CceEEEEEEeCCCEEEEEECC--------------CCEEEEEeCCCCccEEEEe-
Confidence 5799999876544444321 11 122344433 5699998542 3579999987654444432
Q ss_pred CCCCCCCCCCCcceecccccCCcceEEEEc
Q 020245 276 PGSDHHPGPRGWCAFAGGLRGGKHGLLVYG 305 (329)
Q Consensus 276 ~~~~~~p~~r~~~~~~~~~~~~~~~i~i~G 305 (329)
.+ ....+.+++++.. +.||+.-
T Consensus 286 -----~~-~~l~~P~gl~v~~--~~lywtd 307 (400)
T 3p5b_L 286 -----DE-KRLAHPFSLAVFE--DKVFWTD 307 (400)
T ss_dssp -----CS-STTSSEEEEEEET--TEEEEEE
T ss_pred -----CC-CCCCCCEEEEEeC--CEEEEec
Confidence 11 1111224556655 4588765
No 238
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.05 E-value=16 Score=34.73 Aligned_cols=205 Identities=9% Similarity=-0.004 Sum_probs=106.2
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC----cEEEcccCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN----QWTLLSNGDAGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~p 121 (329)
..+.++++....+..+... ...-.+++.. +++||+.- .....|+++++... ....+....
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~-----~~~~~gl~~d~~~~~lY~sD------~~~~~I~~~~l~g~~~~~~~~~vi~~~--- 469 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSD------LSQRMICSTQLDRAHGVSSYDTVISRD--- 469 (791)
T ss_dssp SSEEEECTTSCCCEEEECS-----CSSEEEEEEETTTTEEEEEE------TTTTEEEEEEC--------CEEEECSS---
T ss_pred cceeEeeccCCcceeeecC-----CCceEEEeecccCCeeEEee------ccceeEEEEeccCCCCCcceeEEEecC---
Confidence 4566777766666555432 1222333333 57899863 23467888887642 222222211
Q ss_pred CCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCc-EEEE--ECCEEEEEeeeCCCCc
Q 020245 122 PHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGP-GLIV--TQGKIWVVYGFAGVEV 197 (329)
Q Consensus 122 ~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~--~~~~l~v~gG~~~~~~ 197 (329)
...-...++. .+++||+.-. ....|+++++....-..+... ..... .+++ .++.||+.--. ..
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~~-----~l~~P~gIaVDp~~g~LYwtD~g---~~ 536 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWG---TP 536 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSSSEEEEEEC-----TTCCEEEEEEETTTTEEEEEECS---SS
T ss_pred CCCcceeeeeecCCcEEEEec-----CCCeEEEEeCCCCeEEEEEeC-----CCCCcceEEEecCCCCEEEecCC---CC
Confidence 1111122222 4679999743 236789999887665555432 11122 2333 25789987521 12
Q ss_pred ccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCC
Q 020245 198 DDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDG 275 (329)
Q Consensus 198 ~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 275 (329)
..|++++++...-+.+... .+ ....++++- ++.||+.-.. ...|+++|+....=+.+..
T Consensus 537 ~~I~~~~~dG~~~~~lv~~-~l---~~P~GLavD~~~~~LYwaD~~--------------~~~I~~~d~dG~~~~~v~~- 597 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVDSK--------------LHSISSIDVNGGNRKTILE- 597 (791)
T ss_dssp CEEEEEETTSCCEEEEECS-SC---SCEEEEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEEEE-
T ss_pred CeEEEEecCCCceEEEEeC-CC---CCceEEEEecCCCeEEEEeCC--------------CCcEEEEecCCCceEEEec-
Confidence 5799999876555555431 11 122334333 6799998542 3579999987654444432
Q ss_pred CCCCCCCCCCCcceecccccCCcceEEEEcC
Q 020245 276 PGSDHHPGPRGWCAFAGGLRGGKHGLLVYGG 306 (329)
Q Consensus 276 ~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG 306 (329)
....++.| +++++.. +.||+.-.
T Consensus 598 -~~~~l~~P-----~glav~~--~~lYwtD~ 620 (791)
T 3m0c_C 598 -DEKRLAHP-----FSLAVFE--DKVFWTDI 620 (791)
T ss_dssp -CTTTTSSE-----EEEEEET--TEEEEEET
T ss_pred -CCCccCCC-----CEEEEeC--CEEEEEEC
Confidence 01112222 4555555 44777653
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.88 E-value=8.4 Score=31.40 Aligned_cols=96 Identities=19% Similarity=0.356 Sum_probs=50.9
Q ss_pred EEECCEEEEEccccCCCCCCCceEEEECC-CCcEEEcccCCCCCCCcccceeEee-CCeEEEEcccCCCcCcceeEEEEc
Q 020245 79 AAVGHTIYMFGGRDGTHKELNELYSFDTR-TNQWTLLSNGDAGPPHRSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDV 156 (329)
Q Consensus 79 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~ 156 (329)
+..++.||+... ...++.||+. ...|+..... .. ..+.+.. ++.+|+.. .. ..++.||+
T Consensus 104 ~~~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~-----~~-~~~~~~~~~g~l~vgt-~~-----~~l~~~d~ 164 (330)
T 3hxj_A 104 TIFEDILYVTSM-------DGHLYAINTDGTEKWRFKTKK-----AI-YATPIVSEDGTIYVGS-ND-----NYLYAINP 164 (330)
T ss_dssp EEETTEEEEECT-------TSEEEEECTTSCEEEEEECSS-----CC-CSCCEECTTSCEEEEC-TT-----SEEEEECT
T ss_pred eEECCEEEEEec-------CCEEEEEcCCCCEEEEEcCCC-----ce-eeeeEEcCCCEEEEEc-CC-----CEEEEECC
Confidence 334888887431 2468899987 3356544322 11 1222333 66777642 21 46888988
Q ss_pred CCC-eEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCC
Q 020245 157 VDR-KWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 157 ~~~-~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
... .|...... .. ..+.+. .++.+|+-. ..+++||..
T Consensus 165 ~g~~~~~~~~~~-----~~-~~~~~~d~~g~l~v~t-------~~l~~~d~~ 203 (330)
T 3hxj_A 165 DGTEKWRFKTND-----AI-TSAASIGKDGTIYFGS-------DKVYAINPD 203 (330)
T ss_dssp TSCEEEEEECSS-----CC-CSCCEECTTCCEEEES-------SSEEEECTT
T ss_pred CCCEeEEEecCC-----Cc-eeeeEEcCCCEEEEEe-------CEEEEECCC
Confidence 722 35544222 11 122233 366677643 478888843
No 240
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.73 E-value=9.2 Score=31.65 Aligned_cols=50 Identities=18% Similarity=0.128 Sum_probs=26.5
Q ss_pred CceEEEeCCCCcEEE-EeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 48 NNLHVFDLETLTWSV-ADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
..+..||..+.+... +... . ..-..+.+ +++.++.||.+ ..+..||....
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h-----~-~~v~~v~~sp~~~~l~s~~~d------~~i~~wd~~~~ 150 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGH-----Q-SEVYSVAFSPDNRQILSAGAE------REIKLWNILGE 150 (343)
T ss_dssp SEEEEEETTSSCEEEEEECC-----C-SCEEEEEECSSTTEEEEEETT------SCEEEEESSSC
T ss_pred CcEEEEECCCCcEEEEEcCC-----C-CcEEEEEECCCCCEEEEEcCC------CEEEEEeccCC
Confidence 578889988765432 2211 1 11122222 44555666554 46777887643
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.17 E-value=15 Score=33.41 Aligned_cols=124 Identities=15% Similarity=0.189 Sum_probs=67.0
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCC---CcceeEEEECCEEEEEccccCCCCCC
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPP---RVGVTMAAVGHTIYMFGGRDGTHKEL 98 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~---r~~~~~~~~~~~iyv~GG~~~~~~~~ 98 (329)
.+-++.+++||+.... +.++.+|..+.+ |+.-........+ ......+..+++||+... .
T Consensus 62 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------d 126 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------D 126 (582)
T ss_dssp CCCEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------T
T ss_pred eccEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------C
Confidence 3445679999997753 349999988655 7654332100000 112334567889988532 2
Q ss_pred CceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCC------eEEEEcccC-CCcCcceeEEEEcCCCe--EEEe
Q 020245 99 NELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDR------HVYIFGGCG-VSGRLNDLWGFDVVDRK--WIQY 164 (329)
Q Consensus 99 ~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~------~i~v~GG~~-~~~~~~~~~~~~~~~~~--W~~~ 164 (329)
..++.+|..+. .|+.-..... ..-....+-++.++ .+|+ |... .......++.||..+.+ |+.-
T Consensus 127 g~l~AlD~~TG~~~W~~~~~~~~-~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKKFADHG-AGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp TEEEEEESSSCCEEEEEECSCGG-GTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeecCCCCC-cCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 47999999876 4875432200 00001112233444 5544 3321 11223678999998764 8653
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.94 E-value=17 Score=33.71 Aligned_cols=126 Identities=17% Similarity=0.173 Sum_probs=72.0
Q ss_pred eeEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCC-----CCCCcceeEEEECCEEEEEccccCCCC
Q 020245 24 HAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDV-----PPPRVGVTMAAVGHTIYMFGGRDGTHK 96 (329)
Q Consensus 24 ~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~-----p~~r~~~~~~~~~~~iyv~GG~~~~~~ 96 (329)
.+-++.+++||+.... ..++.+|..+.+ |+.-...... .........+..+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW--------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------ 125 (668)
T ss_dssp CCCEEETTEEEEEEGG--------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------
T ss_pred cCCEEECCEEEEECCC--------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------
Confidence 3445679999997642 579999987655 7653321100 000112334567888888542
Q ss_pred CCCceEEEECCCC--cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEec
Q 020245 97 ELNELYSFDTRTN--QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYP 165 (329)
Q Consensus 97 ~~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~ 165 (329)
...++.+|..+. .|+.-..... .......+.++.++.+|+-.+.........++.||..+.+ |+.-.
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPA-KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTT-SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred -CCEEEEEECCCCCEeeeeccCCCC-CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 247999998876 4876442210 1112223334568888774332222234679999998874 87654
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.91 E-value=13 Score=34.42 Aligned_cols=124 Identities=17% Similarity=0.089 Sum_probs=70.8
Q ss_pred eeEEEECCEEEEEccccCCCCCCCceEEEECCCC--cEEEcccCCCC-----CCCcccceeEeeCCeEEEEcccCCCcCc
Q 020245 76 VTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN--QWTLLSNGDAG-----PPHRSYHSTAADDRHVYIFGGCGVSGRL 148 (329)
Q Consensus 76 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~-----p~~r~~~~~~~~~~~i~v~GG~~~~~~~ 148 (329)
.+-++.++.||+.... ..++.+|..+. .|+.-...... .........++.++++|+....
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------ 126 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------ 126 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT------
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC------
Confidence 3446789999997542 36999998765 58764432100 0000112334567888875421
Q ss_pred ceeEEEEcCCCe--EEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCC-CCcccEEEEeCCCC--ceEEe
Q 020245 149 NDLWGFDVVDRK--WIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAG-VEVDDVHCFDPAHA--QWAQV 213 (329)
Q Consensus 149 ~~~~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~-~~~~~~~~~d~~~~--~w~~~ 213 (329)
..++.+|..+.+ |+.-..... .......+.++.++.+|+-.+... .....++.||.++. .|+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPA-KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTT-SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCC-CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 568999998874 887553211 011222333556888776432111 12357999998765 47654
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=87.60 E-value=10 Score=30.87 Aligned_cols=177 Identities=18% Similarity=0.284 Sum_probs=87.2
Q ss_pred EECCEEEEEcCccCCCCccCCceEEEeCC-CCcEEEEeeCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCCCceEEEE
Q 020245 28 IVGQKVYAFGGEFTPRVPVDNNLHVFDLE-TLTWSVADVTGDVPPPRVGVTMAAV-GHTIYMFGGRDGTHKELNELYSFD 105 (329)
Q Consensus 28 ~~~~~l~~~GG~~~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d 105 (329)
..++.||+... ...+++||+. ...|+.... ... ..+.+.. ++.||+.. . ...++.||
T Consensus 105 ~~~~~l~v~t~--------~~~l~~~d~~g~~~~~~~~~-----~~~-~~~~~~~~~g~l~vgt-~------~~~l~~~d 163 (330)
T 3hxj_A 105 IFEDILYVTSM--------DGHLYAINTDGTEKWRFKTK-----KAI-YATPIVSEDGTIYVGS-N------DNYLYAIN 163 (330)
T ss_dssp EETTEEEEECT--------TSEEEEECTTSCEEEEEECS-----SCC-CSCCEECTTSCEEEEC-T------TSEEEEEC
T ss_pred EECCEEEEEec--------CCEEEEEcCCCCEEEEEcCC-----Cce-eeeeEEcCCCEEEEEc-C------CCEEEEEC
Confidence 34778887432 1568999987 334544321 111 1222333 56777742 1 24788999
Q ss_pred CCCC-cEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCC-CeEEEecCCCCCCCCCCCcEEEEE
Q 020245 106 TRTN-QWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVD-RKWIQYPSAGENCKGRGGPGLIVT 182 (329)
Q Consensus 106 ~~~~-~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~ 182 (329)
+... .|..... .... .+.+. .++.+|+.. ..++.||... ..|+..... .. ..+.+..
T Consensus 164 ~~g~~~~~~~~~-----~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~-----~~-~~~~~~~ 223 (330)
T 3hxj_A 164 PDGTEKWRFKTN-----DAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY-----WT-VTRPAIS 223 (330)
T ss_dssp TTSCEEEEEECS-----SCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS-----CC-CSCCEEC
T ss_pred CCCCEeEEEecC-----CCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC-----cc-eeceEEC
Confidence 8732 3544321 1122 22233 467777754 3578888432 246544322 11 1222333
Q ss_pred -CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CCEEEEEcCccCCCCCCcCCCCeeeceeE
Q 020245 183 -QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GKHIVVYGGEVDPSDLGHLGAGKFAGELY 260 (329)
Q Consensus 183 -~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 260 (329)
++.+|+.. .. ..+++||............. .... ..+.. ++.||+... ...++
T Consensus 224 ~~g~l~v~t-~~----~gl~~~~~~g~~~~~~~~~~----~~~~-~~~~~~~g~l~v~t~---------------~ggl~ 278 (330)
T 3hxj_A 224 EDGTIYVTS-LD----GHLYAINPDGTEKWRFKTGK----RIES-SPVIGNTDTIYFGSY---------------DGHLY 278 (330)
T ss_dssp TTSCEEEEE-TT----TEEEEECTTSCEEEEEECSS----CCCS-CCEECTTSCEEEECT---------------TCEEE
T ss_pred CCCeEEEEc-CC----CeEEEECCCCCEeEEeeCCC----Cccc-cceEcCCCeEEEecC---------------CCCEE
Confidence 45677743 11 46888887544433333211 1111 12223 567776432 13688
Q ss_pred EEEcCCc-eeE
Q 020245 261 SLDTETL-VWT 270 (329)
Q Consensus 261 ~~d~~~~-~W~ 270 (329)
+||.+.. .|.
T Consensus 279 ~~d~~g~~~~~ 289 (330)
T 3hxj_A 279 AINPDGTEKWN 289 (330)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCcEEEE
Confidence 9997544 354
No 245
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=87.58 E-value=18 Score=33.53 Aligned_cols=113 Identities=12% Similarity=0.006 Sum_probs=57.8
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccC---CCCCCCceEEEECCCCcEEEcccCCCCCCCc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDG---THKELNELYSFDTRTNQWTLLSNGDAGPPHR 124 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r 124 (329)
..++.+|+.+.+-..+.................-+++.++++.... .......++.+|..+.+-+.+..... ...+
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~~ 115 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV-SNAK 115 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC-CSCC
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc-cccc
Confidence 4788999887765544432111000112222223455445543321 11234789999999887665554321 0111
Q ss_pred ccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCC
Q 020245 125 SYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSA 167 (329)
Q Consensus 125 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~ 167 (329)
.......-+++.++++.. ..++.+|..+.+...+...
T Consensus 116 ~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~~~ 152 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVVST 152 (723)
T ss_dssp CSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEECC
T ss_pred ccccEECCCCCEEEEEEC------CeEEEEECCCCceEEEecC
Confidence 122222335554455442 4688888888776666543
No 246
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=87.47 E-value=7.9 Score=35.50 Aligned_cols=153 Identities=16% Similarity=0.277 Sum_probs=79.9
Q ss_pred ceeEEEECCEEEEEcCccCCCCccCCceEEEeCCCC-cEEEEeeCC---CCCCCCcceeEEE-ECCEEEEEccccCCCCC
Q 020245 23 SHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETL-TWSVADVTG---DVPPPRVGVTMAA-VGHTIYMFGGRDGTHKE 97 (329)
Q Consensus 23 ~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~-~W~~~~~~~---~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 97 (329)
.-+++..++++|+|-| +.+|+++.... ......... .+| ....++... .++++|+|=|
T Consensus 446 fDAit~~rg~~yfFKg---------~~yWr~~~~~~~~~~P~~Is~~wp~LP-~~IDAA~~~~~~~k~yFFkG------- 508 (631)
T 1ck7_A 446 FDGIAQIRGEIFFFKD---------RFIWRTVTPRDKPMGPLLVATFWPELP-EKIDAVYEAPQEEKAVFFAG------- 508 (631)
T ss_dssp CSEEEECSSSEEEECS---------SEEEEESCTTSCCEEEEEGGGTCTTSC-SSCSBCCEETTTTEEEEEET-------
T ss_pred cceeEecCCcEEEEcC---------CEEEEEcCCCCCCCCceeccccCCCCC-ccceEEEEECCCCEEEEEec-------
Confidence 3455566889999988 56888876542 222111111 123 223333322 2578999854
Q ss_pred CCceEEEECCCC--cE-EEcccCCCCCCC--cccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCeEE-----EecC
Q 020245 98 LNELYSFDTRTN--QW-TLLSNGDAGPPH--RSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI-----QYPS 166 (329)
Q Consensus 98 ~~~~~~~d~~~~--~W-~~~~~~~~~p~~--r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~-----~~~~ 166 (329)
+.+|+|+..+. -+ +.+...+. |.. +-.++.. ..++++|+|-| +..++||..+++-. .+..
T Consensus 509 -~~yWry~~~~l~~GYPk~Is~~G~-P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~ 579 (631)
T 1ck7_A 509 -NEYWIYSASTLERGYPKPLTSLGL-PPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIAD 579 (631)
T ss_dssp -TEEEEEETTEECTTCCEEGGGGTC-CTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTT
T ss_pred -CEEEEECCCccccCCCccchhcCC-CCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHh
Confidence 45888885311 01 12222211 111 1122222 24689999988 67899998776422 2221
Q ss_pred C-CCCCCCCCCcEEEEEC--CEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 167 A-GENCKGRGGPGLIVTQ--GKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~--~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
. +. .+..-.++...+ +++|++-| +..|+||.....
T Consensus 580 ~w~G--~p~~iDAAf~~~~~g~~YFFkG------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 580 AWNA--IPDNLDAVVDLQGGGHSYFFKG------AYYLKLENQSLK 617 (631)
T ss_dssp SCSS--CCTTCCEEECCTTSCBCEEEET------TEEECCBTTBTT
T ss_pred hcCC--CCCCCcEeEEEcCCCeEEEEEC------CEEEEEeCccce
Confidence 1 11 111222333333 78999877 688888875543
No 247
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=87.43 E-value=23 Score=34.71 Aligned_cols=237 Identities=14% Similarity=0.055 Sum_probs=113.0
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
..+++++.+.... ...+|.+++....-+.+.... ........-+++.++++. ...++.+|..+
T Consensus 212 s~d~l~~~~~~dg-----~~~l~~~~~~g~~~~~l~~~~-----~~~~~~~SpDG~~la~~~-------~~~i~~~d~~~ 274 (1045)
T 1k32_A 212 VGHRIYFITDIDG-----FGQIYSTDLDGKDLRKHTSFT-----DYYPRHLNTDGRRILFSK-------GGSIYIFNPDT 274 (1045)
T ss_dssp ETTEEEEEECTTS-----SCEEEEEETTSCSCEECCCCC-----SSCEEEEEESSSCEEEEE-------TTEEEEECTTT
T ss_pred eCCEEEEEEeccC-----ceEEEEEeCCCCcceEecCCC-----CcceeeEcCCCCEEEEEe-------CCEEEEecCCc
Confidence 3567766664321 256888887665555444321 111223334555444431 24688888765
Q ss_pred CcEEEcccCCCCCC-------CcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEE
Q 020245 109 NQWTLLSNGDAGPP-------HRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLI 180 (329)
Q Consensus 109 ~~W~~~~~~~~~p~-------~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 180 (329)
.+...+........ ......... -+++.++++. ...++.++..+.....+.... .........
T Consensus 275 ~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~ 345 (1045)
T 1k32_A 275 EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGTYVLKVPEPL---RIRYVRRGG 345 (1045)
T ss_dssp CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSSBEEECSCCS---CEEEEEECS
T ss_pred eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE------cCEEEEEcCCCCceEEccCCC---cceEEeeeE
Confidence 55443332110000 011222223 3444444443 146788888777655543321 101111112
Q ss_pred EECCEEEEEeeeCCCCcccEE-EEeCCCCceEEeeccCCCCCCcceeEEE-EECCEEEEEcCccCCCCCCcCCCCeeece
Q 020245 181 VTQGKIWVVYGFAGVEVDDVH-CFDPAHAQWAQVETSGEKPTARSVFSTV-GIGKHIVVYGGEVDPSDLGHLGAGKFAGE 258 (329)
Q Consensus 181 ~~~~~l~v~gG~~~~~~~~~~-~~d~~~~~w~~~~~~~~~p~~r~~~~~~-~~~~~i~i~GG~~~~~~~~~~~~~~~~~~ 258 (329)
. +++.+++... -..++ .+|..+.+...+.. .......++ .-+++.++++.. ...
T Consensus 346 s-dg~~l~~~s~----~~~l~~~~d~~~~~~~~l~~-----~~~~~~~~~~SpDG~~la~~~~--------------~~~ 401 (1045)
T 1k32_A 346 D-TKVAFIHGTR----EGDFLGIYDYRTGKAEKFEE-----NLGNVFAMGVDRNGKFAVVAND--------------RFE 401 (1045)
T ss_dssp S-SEEEEEEEET----TEEEEEEEETTTCCEEECCC-----CCCSEEEEEECTTSSEEEEEET--------------TSE
T ss_pred c-CCCeEEEEEC----CCceEEEEECCCCCceEecC-----CccceeeeEECCCCCEEEEECC--------------CCe
Confidence 2 5554444432 25788 88988776655541 111122222 225555555542 137
Q ss_pred eEEEEcCCceeEeecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCC----CCCcccceEEEecccC
Q 020245 259 LYSLDTETLVWTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSP----SNDRLDDIYFFTPCLD 325 (329)
Q Consensus 259 ~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~----~~~~~~~v~~~~~~~~ 325 (329)
++.+|+++..-..+.. .... .. .+.+...+ +..+++++.+. .......|+++|+++.
T Consensus 402 v~~~d~~tg~~~~~~~------~~~~-~v--~~~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 402 IMTVDLETGKPTVIER------SREA-MI--TDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEEEETTTCCEEEEEE------CSSS-CC--CCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred EEEEECCCCceEEecc------CCCC-Cc--cceEECCC-CCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 8999998887666653 0111 11 12222223 33556655432 1123457888887654
No 248
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.38 E-value=16 Score=32.86 Aligned_cols=141 Identities=9% Similarity=0.007 Sum_probs=73.6
Q ss_pred CCceEEEEC--CCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCC
Q 020245 98 LNELYSFDT--RTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRG 175 (329)
Q Consensus 98 ~~~~~~~d~--~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 175 (329)
...++..+. .... ..+... + .....+....++.++++.+... .+..||+.+.+-..+...+ .
T Consensus 89 ~~~l~~~~~~~~g~~-~~l~~~---~-~~~~~~~s~dg~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~~~---~--- 152 (582)
T 3o4h_A 89 QHALFKVNTSRPGEE-QRLEAV---K-PMRILSGVDTGEAVVFTGATED-----RVALYALDGGGLRELARLP---G--- 152 (582)
T ss_dssp CEEEEEEETTSTTCC-EECTTS---C-SBEEEEEEECSSCEEEEEECSS-----CEEEEEEETTEEEEEEEES---S---
T ss_pred ceEEEEEeccCCCcc-ccccCC---C-CceeeeeCCCCCeEEEEecCCC-----CceEEEccCCcEEEeecCC---C---
Confidence 346777777 4433 233322 1 1222222223445555554332 2347899988877776542 2
Q ss_pred CcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCee
Q 020245 176 GPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKF 255 (329)
Q Consensus 176 ~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~ 255 (329)
......-+++.++++..+......++.+|.++.+.+.+... +.. ....+..-+++.++......
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~---~~~-~~~~~~SpDG~~l~~~~~~~------------ 216 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG---EGS-FSSASISPGMKVTAGLETAR------------ 216 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS---SCE-EEEEEECTTSCEEEEEECSS------------
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC---CCc-cccceECCCCCEEEEccCCC------------
Confidence 22233456666665554433334699999988888877521 111 11111122554444322110
Q ss_pred eceeEEEEcCCceeE
Q 020245 256 AGELYSLDTETLVWT 270 (329)
Q Consensus 256 ~~~~~~~d~~~~~W~ 270 (329)
...++.+|+++...+
T Consensus 217 ~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 217 EARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEECTTTCCEE
T ss_pred eeEEEEEcCCCCcEE
Confidence 247999999888776
No 249
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=87.11 E-value=9.2 Score=29.79 Aligned_cols=103 Identities=14% Similarity=0.261 Sum_probs=55.8
Q ss_pred eCCeEEEEcccCCCcCcceeEEEEcCCCe--EEEecCC-CCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 132 DDRHVYIFGGCGVSGRLNDLWGFDVVDRK--WIQYPSA-GENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 132 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~~--W~~~~~~-~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
.++++|+|=| ..+|+++..... -..+... +..| ....++ ...++++|++-| +.+|+|+...+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP-~~IDAA-~~~~~~~yfFkG------~~yw~~~~~~~ 91 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGP-STVDAA-FSWEDKLYLIQD------TKVYVFLTKGG 91 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSC-SSCSEE-EEETTEEEEEET------TEEEEEECSSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCC-CCccEE-EEECCcEEEecC------CEEEEEeCCCC
Confidence 5789999977 456666543322 1222221 1122 223333 335899999977 68999986431
Q ss_pred -c----e-EEeeccCCCCCC----cceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 209 -Q----W-AQVETSGEKPTA----RSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 209 -~----w-~~~~~~~~~p~~----r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
+ . +.+...-.+|.. +.. +++.. ++++|++-| +..|+||..+
T Consensus 92 ~~~~~gyPk~i~~~~G~p~~~~~~~ID-AA~~~~~~gk~yfFkG----------------~~ywr~d~~~ 144 (219)
T 1hxn_A 92 YTLVNGYPKRLEKELGSPPVISLEAVD-AAFVCPGSSRLHIMAG----------------RRLWWLDLKS 144 (219)
T ss_dssp CEECTTCCEEHHHHHCCCSSCCCSCCC-EEECCTTCCEEEEEET----------------TEEEEEEGGG
T ss_pred ceecCCCCeehhhccCCCCcccccccc-eeEEecCCCEEEEEeC----------------CEEEEEeCCC
Confidence 1 1 112110022322 122 33333 568999987 3689999764
No 250
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=86.74 E-value=20 Score=33.29 Aligned_cols=156 Identities=9% Similarity=0.015 Sum_probs=79.8
Q ss_pred CCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCC--------cCcceeEEEEcCCCeE--EEecCC
Q 020245 98 LNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVS--------GRLNDLWGFDVVDRKW--IQYPSA 167 (329)
Q Consensus 98 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--------~~~~~~~~~~~~~~~W--~~~~~~ 167 (329)
...++++|+.+++....... ..+.....-. +++-+++.-.... .....++++++.+..= ..+...
T Consensus 154 ~~~i~v~dl~tg~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 228 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA 228 (693)
T ss_dssp EEEEEEEETTTCSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC
T ss_pred eEEEEEEECCCCCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec
Confidence 35799999999886554221 1112222233 5544444333322 3345688888876532 222222
Q ss_pred CCCCCCCCCcEEE-EECCEEEEEeeeCCCCcccEEEEeCCCC--ceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCC
Q 020245 168 GENCKGRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDP 244 (329)
Q Consensus 168 ~~~~~~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~ 244 (329)
+.. ......... .-+++.+++....+...++++.+|.++. .++.+.... ... .......++.||+.......
T Consensus 229 ~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~---~~~-~~~~~~~g~~l~~~t~~~~~ 303 (693)
T 3iuj_A 229 IPA-QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL---DAD-VSLVDNKGSTLYLLTNRDAP 303 (693)
T ss_dssp SGG-GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS---SSC-EEEEEEETTEEEEEECTTCT
T ss_pred CCC-CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC---Cce-EEEEeccCCEEEEEECCCCC
Confidence 100 111122222 2345544443332323368999998665 687776321 111 12233457789888654221
Q ss_pred CCCCcCCCCeeeceeEEEEcCCc---eeEeecC
Q 020245 245 SDLGHLGAGKFAGELYSLDTETL---VWTRWDD 274 (329)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~ 274 (329)
...++..|+++. .|+.+-.
T Consensus 304 -----------~~~l~~~d~~~~~~~~~~~l~~ 325 (693)
T 3iuj_A 304 -----------NRRLVTVDAANPGPAHWRDLIP 325 (693)
T ss_dssp -----------TCEEEEEETTSCCGGGCEEEEC
T ss_pred -----------CCEEEEEeCCCCCccccEEEec
Confidence 247889998763 4877653
No 251
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=86.73 E-value=9.8 Score=29.76 Aligned_cols=105 Identities=10% Similarity=0.103 Sum_probs=58.9
Q ss_pred eCCeEEEEcccCCCcCcceeEEEEcCC----CeEE----EecC-CCCCCCC----CCCcEEEE-ECCEEEEEeeeCCCCc
Q 020245 132 DDRHVYIFGGCGVSGRLNDLWGFDVVD----RKWI----QYPS-AGENCKG----RGGPGLIV-TQGKIWVVYGFAGVEV 197 (329)
Q Consensus 132 ~~~~i~v~GG~~~~~~~~~~~~~~~~~----~~W~----~~~~-~~~~~~~----~~~~~~~~-~~~~l~v~gG~~~~~~ 197 (329)
.++++|+|-| +.+|+||..+ +... .+.. .+..|.. ...++... .++++|++-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5889999988 5688887632 2221 1111 1111210 22222221 3689999987
Q ss_pred ccEEEEeCCCCceEEeec--cCCCCC------CcceeEEEE--ECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 198 DDVHCFDPAHAQWAQVET--SGEKPT------ARSVFSTVG--IGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 198 ~~~~~~d~~~~~w~~~~~--~~~~p~------~r~~~~~~~--~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
+..|+||....+...-+. ....|. +..--++.. .++++|++=| +..|+||..
T Consensus 136 ~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG----------------~~ywr~d~~ 197 (225)
T 3oyo_A 136 NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG----------------QNYVRIDFT 197 (225)
T ss_dssp TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET----------------TEEEEEECC
T ss_pred CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC----------------CEEEEEeCC
Confidence 689999976655443100 001221 222234444 3679999987 478999987
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=86.10 E-value=13 Score=30.57 Aligned_cols=196 Identities=11% Similarity=0.079 Sum_probs=104.6
Q ss_pred eeEEEE--CCEEEEEcCccCCCCccCCceEEEeCCC----CcEEEEeeCCCCCCCCcceeEEE--ECCEEEEEccccCCC
Q 020245 24 HAITIV--GQKVYAFGGEFTPRVPVDNNLHVFDLET----LTWSVADVTGDVPPPRVGVTMAA--VGHTIYMFGGRDGTH 95 (329)
Q Consensus 24 ~~~~~~--~~~l~~~GG~~~~~~~~~~~~~~~d~~~----~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 95 (329)
.+++.. +++||+.-.. .+.++++|+.. .....+.... +..+ ..+++ .++.||+.-
T Consensus 33 ~g~~~d~~~~~ly~~D~~-------~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p---~glavd~~~~~ly~~d------ 95 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRD-IQAP---DGLAVDWIHSNIYWTD------ 95 (316)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSS-CSCC---CEEEEETTTTEEEEEE------
T ss_pred EEEEEEeCCCEEEEEECC-------CCcEEEEECCCCCCCcccEEEEeCC-CCCc---CEEEEeecCCeEEEEE------
Confidence 444443 4689987642 26799999875 2223222111 1112 33444 367899963
Q ss_pred CCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCC
Q 020245 96 KELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGR 174 (329)
Q Consensus 96 ~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 174 (329)
.....+.++|+....-+.+.... ...+ ...++. .++.||+..-. ....++++++....-+.+... ...
T Consensus 96 ~~~~~I~~~~~~g~~~~~~~~~~-~~~P--~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~~~~~----~~~ 164 (316)
T 1ijq_A 96 SVLGTVSVADTKGVKRKTLFREN-GSKP--RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTE----NIQ 164 (316)
T ss_dssp TTTTEEEEEETTSSSEEEEEECT-TCCE--EEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECS----SCS
T ss_pred CCCCEEEEEeCCCCceEEEEECC-CCCc--ceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEEEEEC----CCC
Confidence 23467899998765433332211 0122 222222 47789987421 125789999876544433322 111
Q ss_pred CCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCC
Q 020245 175 GGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGA 252 (329)
Q Consensus 175 ~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~ 252 (329)
.-..++.. +++||+.-. ....++++|.+...-+.+.... .......++++.++.||+.-..
T Consensus 165 ~P~gla~d~~~~~lY~~D~----~~~~I~~~d~dg~~~~~~~~~~--~~~~~P~giav~~~~ly~~d~~----------- 227 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDS----KLHSISSIDVNGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTDII----------- 227 (316)
T ss_dssp CEEEEEEETTTTEEEEEET----TTTEEEEEETTSCSCEEEEECT--TTTSSEEEEEEETTEEEEEETT-----------
T ss_pred CceEEEEeccCCEEEEEEC----CCCeEEEEecCCCceEEEeecC--CccCCcEEEEEECCEEEEEECC-----------
Confidence 22233333 578998753 2368999998765444443211 1122345666678899987632
Q ss_pred CeeeceeEEEEcCCc
Q 020245 253 GKFAGELYSLDTETL 267 (329)
Q Consensus 253 ~~~~~~~~~~d~~~~ 267 (329)
...|.++|..+.
T Consensus 228 ---~~~V~~~~~~~g 239 (316)
T 1ijq_A 228 ---NEAIFSANRLTG 239 (316)
T ss_dssp ---TTEEEEEETTTC
T ss_pred ---CCeEEEEeCCCC
Confidence 246788887443
No 253
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=85.86 E-value=17 Score=31.61 Aligned_cols=122 Identities=15% Similarity=-0.011 Sum_probs=60.9
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccC---CCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDG---THKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~---~~~~~~~~~~~d 105 (329)
.+++|+.-..... . .+.+.++|+.+.+-......+ ...+.... .+..+|+..-... .....+.+..+|
T Consensus 84 ~~~vyV~n~~~~~-~--~~~VsVID~~t~~vv~~I~vG-----~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 84 ARRVYIQDPAHFA-A--ITQQFVIDGSTGRILGMTDGG-----FLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp TTEEEEEECTTTC-S--SEEEEEEETTTTEEEEEEEEC-----SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEECCCcCC-C--CCeEEEEECCCCEEEEEEECC-----CCCceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 4578887642211 1 168999999987654322222 11122222 2456888742100 001235799999
Q ss_pred CCCCcEE-EcccCCCCCC--CcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEEE
Q 020245 106 TRTNQWT-LLSNGDAGPP--HRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ 163 (329)
Q Consensus 106 ~~~~~W~-~~~~~~~~p~--~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~ 163 (329)
+.+.+-. .+...+.... ...-+.+.. -+.++||..-. ..+.+.++|+.+.+-..
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv~ 214 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFDR 214 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEEE
Confidence 9988643 2322100000 011122222 34477776321 12678899999887543
No 254
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.80 E-value=12 Score=30.01 Aligned_cols=135 Identities=12% Similarity=0.046 Sum_probs=66.4
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
+.|..+|..+.+....-... .....-.++.+ +++.++.|+.+ ..+..+|..+++-...-.. . ..
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~---~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~~~~~~---h--~~ 110 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMTS---H--SA 110 (318)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEEC---C--SS
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeEEEecC---c--cc
Confidence 67999999988765443321 11111222333 45677777665 4688899888754332221 1 11
Q ss_pred cceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEE-EECCEEEEEeeeCCCCcccEEEEe
Q 020245 126 YHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFD 204 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d 204 (329)
........+.+++.|+... .+..++..+.......... ......... ..+++.++.++.+ ..+..||
T Consensus 111 ~~~~~~~~~~~l~s~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d----~~i~iwd 178 (318)
T 4ggc_A 111 RVGSLSWNSYILSSGSRSG-----HIHHHDVRVAEHHVATLSG---HSQEVCGLRWAPDGRHLASGGND----NLVNVWP 178 (318)
T ss_dssp CEEEEEEETTEEEEEETTS-----EEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETT----SCEEEEE
T ss_pred eEEEeecCCCEEEEEecCC-----ceEeeecCCCceeEEEEcC---ccCceEEEEEcCCCCEEEEEecC----cceeEEE
Confidence 2223334556666665432 3444444443322111110 111111222 2345566666654 4677788
Q ss_pred CCCC
Q 020245 205 PAHA 208 (329)
Q Consensus 205 ~~~~ 208 (329)
..+.
T Consensus 179 ~~~~ 182 (318)
T 4ggc_A 179 SAPG 182 (318)
T ss_dssp SSCB
T ss_pred CCCC
Confidence 7654
No 255
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.78 E-value=15 Score=30.87 Aligned_cols=183 Identities=5% Similarity=-0.048 Sum_probs=91.3
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcE
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPG 178 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 178 (329)
..+..+|+.+.+-...... ... -......-++++++.++. +.+.+++..+........... ........
T Consensus 157 ~~i~iwd~~~~~~~~~~~~---~~~-V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v 225 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIET---RGE-VKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIARKTDFD-KNWSLSKI 225 (365)
T ss_dssp CEEEEEETTTTEEEEEEEC---SSC-CCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEEECCCC-TTEEEEEE
T ss_pred CEEEEeECCCCcEEEEeCC---CCc-eEEEEEccCCceEEeccc------eeEEEEEeccCcceeeeecCC-CCCCEEEE
Confidence 4678889887764432221 111 111222236676666652 356778887776544333210 01111112
Q ss_pred EEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeee
Q 020245 179 LIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFA 256 (329)
Q Consensus 179 ~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~ 256 (329)
...-+++.++.++.++.....++.++............ .+........++.+ ++++++.|+.+
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D-------------- 290 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASND-------------- 290 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETT--------------
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCC--------------
Confidence 22457888888776654444566777665554433211 11111111222233 66777777753
Q ss_pred ceeEEEEcCCceeE-eecCCCCCCCCCCCCCcceecccccCCcceEEEEcCCCCCCCcccceEEEecc
Q 020245 257 GELYSLDTETLVWT-RWDDGPGSDHHPGPRGWCAFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPC 323 (329)
Q Consensus 257 ~~~~~~d~~~~~W~-~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~ 323 (329)
..|.++|+++.+-. .+.. .+...-.+++.-.+ +.+++.|+.+. .|-++++.
T Consensus 291 ~~V~iwd~~~~~~~~~~~~---------gH~~~V~~v~fSpd-g~~laS~S~D~------tvrvw~ip 342 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQ---------AHSFAITEVTISPD-STYVASVSAAN------TIHIIKLP 342 (365)
T ss_dssp SCEEEEETTTTEEEEEETT---------SSSSCEEEEEECTT-SCEEEEEETTS------EEEEEECC
T ss_pred CEEEEEECCCCcEEEEecC---------cccCCEEEEEECCC-CCEEEEEeCCC------eEEEEEcC
Confidence 35888998876432 2221 11111133444444 55888888764 45666654
No 256
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=85.23 E-value=6.3 Score=30.93 Aligned_cols=63 Identities=11% Similarity=0.140 Sum_probs=38.2
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEE-----EecC-CCCCC---C-CCCCcEEEE-ECCEEEEEeeeCCCCcccEE
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWI-----QYPS-AGENC---K-GRGGPGLIV-TQGKIWVVYGFAGVEVDDVH 201 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~-----~~~~-~~~~~---~-~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~ 201 (329)
++++|+|-| +..|+||..+++-. .+.. .+... . .....+... .++++|++-| +..|
T Consensus 129 ~~k~yfFkG-------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg------~~Yw 195 (227)
T 3lp9_A 129 GKEVYLFKG-------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD------DHYA 195 (227)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET------TEEE
T ss_pred CCEEEEEEC-------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC------CEEE
Confidence 689999988 67899998765421 1111 11000 0 122222222 3589999987 6899
Q ss_pred EEeCCCC
Q 020245 202 CFDPAHA 208 (329)
Q Consensus 202 ~~d~~~~ 208 (329)
+||..+.
T Consensus 196 r~d~~~~ 202 (227)
T 3lp9_A 196 RVKVTPX 202 (227)
T ss_dssp EEECCSS
T ss_pred EEECCcc
Confidence 9998765
No 257
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=84.90 E-value=14 Score=29.80 Aligned_cols=63 Identities=13% Similarity=0.164 Sum_probs=32.6
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEEC----CEEEEEccccCCCCCCCceEEEEC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVG----HTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
+.+++.|+.+ ..+..+|..+.+|..+.... .....-..+.+. +.+++.|+.+ ..+..||.
T Consensus 67 g~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~ 130 (297)
T 2pm7_B 67 GTILASCSYD-------GKVMIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEF 130 (297)
T ss_dssp CSEEEEEETT-------TEEEEEEBSSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEB
T ss_pred CCEEEEEcCC-------CEEEEEEcCCCceEEEEEee---cCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEe
Confidence 4555556532 56888888877665443321 111112223331 3456666544 35667776
Q ss_pred CCC
Q 020245 107 RTN 109 (329)
Q Consensus 107 ~~~ 109 (329)
.+.
T Consensus 131 ~~~ 133 (297)
T 2pm7_B 131 KEN 133 (297)
T ss_dssp CSS
T ss_pred cCC
Confidence 654
No 258
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=84.23 E-value=14 Score=33.81 Aligned_cols=151 Identities=15% Similarity=0.229 Sum_probs=76.2
Q ss_pred eEEEECCEEEEEccccCCCCCCCceEEEECCCC-cE--EEcccC-CCCCCCcccceeEe-eCCeEEEEcccCCCcCccee
Q 020245 77 TMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN-QW--TLLSNG-DAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDL 151 (329)
Q Consensus 77 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W--~~~~~~-~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 151 (329)
+++.+.+++|+|=| +.+|+++.... .. ..+... +..|.... ++... .++++|+|-| +..
T Consensus 448 Ait~~rg~~yfFKg--------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~ID-AA~~~~~~~k~yFFkG-------~~y 511 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD--------RFIWRTVTPRDKPMGPLLVATFWPELPEKID-AVYEAPQEEKAVFFAG-------NEY 511 (631)
T ss_dssp EEEECSSSEEEECS--------SEEEEESCTTSCCEEEEEGGGTCTTSCSSCS-BCCEETTTTEEEEEET-------TEE
T ss_pred eeEecCCcEEEEcC--------CEEEEEcCCCCCCCCceeccccCCCCCccce-EEEEECCCCEEEEEec-------CEE
Confidence 44556788999855 34777765442 11 122211 22232222 22222 3678999977 568
Q ss_pred EEEEcCC---CeEEEecCCCCCCC--CCCCcEEE-EECCEEEEEeeeCCCCcccEEEEeCCCCceE-----EeeccCCCC
Q 020245 152 WGFDVVD---RKWIQYPSAGENCK--GRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFDPAHAQWA-----QVETSGEKP 220 (329)
Q Consensus 152 ~~~~~~~---~~W~~~~~~~~~~~--~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~-----~~~~~~~~p 220 (329)
|+|+..+ +--..+....- |. .....+.. ..++++|++-| +..|+||....+-. .+.. .-+.
T Consensus 512 Wry~~~~l~~GYPk~Is~~G~-P~~~~~IDAAf~~~~~gktYFFkG------~~ywryd~~~~~vd~gYPk~i~~-~w~G 583 (631)
T 1ck7_A 512 WIYSASTLERGYPKPLTSLGL-PPDVQRVDAAFNWSKNKKTYIFAG------DKFWRYNEVKKKMDPGFPKLIAD-AWNA 583 (631)
T ss_dssp EEEETTEECTTCCEEGGGGTC-CTTCCCCCBCCCCTTTCEEEEEET------TEEEEEETTTTEECTTCCEETTT-SCSS
T ss_pred EEECCCccccCCCccchhcCC-CCCCCcceeEEEecCCCeEEEEEC------CEEEEEcCCcccccCCCCcchHh-hcCC
Confidence 8887531 11122322111 11 12222222 14688999977 69999997654211 1110 0011
Q ss_pred CCcceeEEEEEC--CEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 221 TARSVFSTVGIG--KHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 221 ~~r~~~~~~~~~--~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
.+..--++...+ +.+|++=| +..|+||....
T Consensus 584 ~p~~iDAAf~~~~~g~~YFFkG----------------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 584 IPDNLDAVVDLQGGGHSYFFKG----------------AYYLKLENQSL 616 (631)
T ss_dssp CCTTCCEEECCTTSCBCEEEET----------------TEEECCBTTBT
T ss_pred CCCCCcEeEEEcCCCeEEEEEC----------------CEEEEEeCccc
Confidence 222223444443 68888877 35778887654
No 259
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=83.09 E-value=18 Score=29.78 Aligned_cols=64 Identities=13% Similarity=0.163 Sum_probs=34.2
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEE-EcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWT-LLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++.+++.|+.+ ..+..||..+.+.. .+... ...-......-+++.++.|+.+ ..+..||+....
T Consensus 87 ~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~ 151 (343)
T 2xzm_R 87 ENCFAISSSWD------KTLRLWDLRTGTTYKRFVGH----QSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGEC 151 (343)
T ss_dssp STTEEEEEETT------SEEEEEETTSSCEEEEEECC----CSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCE
T ss_pred CCCEEEEEcCC------CcEEEEECCCCcEEEEEcCC----CCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCc
Confidence 34566666554 46888898876532 22211 1111111222356666777754 457788877544
No 260
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=82.65 E-value=19 Score=29.55 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=57.1
Q ss_pred EEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEE
Q 020245 84 TIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ 163 (329)
Q Consensus 84 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~ 163 (329)
.+++.|+.+ ..+..||..+........... ....-......-+++.++.|+.+ ..+..||..+.+...
T Consensus 55 ~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 55 NFLIAGSWA------NDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQ 122 (368)
T ss_dssp EEEEEEETT------SEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred eEEEEECCC------CcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCcee
Confidence 777777655 468888887632222111100 01111111122256666777654 468999999888665
Q ss_pred ecCCCCCCCCCCCcEEEE---ECCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 164 YPSAGENCKGRGGPGLIV---TQGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~---~~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
+... ...-.++.. .++.+++.++.+ ..+..||+.+.+
T Consensus 123 ~~~~-----~~~v~~~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~ 162 (368)
T 3mmy_A 123 IAQH-----DAPVKTIHWIKAPNYSCVMTGSWD----KTLKFWDTRSSN 162 (368)
T ss_dssp EEEC-----SSCEEEEEEEECSSCEEEEEEETT----SEEEEECSSCSS
T ss_pred eccc-----cCceEEEEEEeCCCCCEEEEccCC----CcEEEEECCCCc
Confidence 4432 222222332 356677777755 578888886654
No 261
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=82.26 E-value=19 Score=29.37 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=52.5
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEE-EcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWT-LLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++++++.|+.+ ..+..||..+.+-. .+... ...-......-++.+++.|+.+ ..+..||+....
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~ 140 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFVGH----KSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQC 140 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECC----SSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSCE
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEccC----CCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCe
Confidence 45566666655 57888998877532 22111 1111111122356677777765 357778887654
Q ss_pred EEEecCCCCCCCCCCCcEEEEE-------CCEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 161 WIQYPSAGENCKGRGGPGLIVT-------QGKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 161 W~~~~~~~~~~~~~~~~~~~~~-------~~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
-..+... ...-..+... ++..++.++.+ ..+..||+.+.+-
T Consensus 141 ~~~~~~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~~d----~~i~~wd~~~~~~ 188 (319)
T 3frx_A 141 LATLLGH-----NDWVSQVRVVPNEKADDDSVTIISAGND----KMVKAWNLNQFQI 188 (319)
T ss_dssp EEEECCC-----SSCEEEEEECCC------CCEEEEEETT----SCEEEEETTTTEE
T ss_pred EEEEecc-----CCcEEEEEEccCCCCCCCccEEEEEeCC----CEEEEEECCcchh
Confidence 4333221 1111111211 23355666644 4677788766543
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.17 E-value=22 Score=30.17 Aligned_cols=202 Identities=5% Similarity=-0.064 Sum_probs=108.6
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
+.+.++|+.......+... ...-.+++.. ++.||+.- .....++++++.....+.+...+ ....
T Consensus 96 ~~I~~i~~~~~~~~~~~~~-----~~~~~gl~~d~~~~~ly~~D------~~~~~I~r~~~~g~~~~~~~~~~---~~~p 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRRELVFWSD------VTLDRILRANLNGSNVEEVVSTG---LESP 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECS-----CSCEEEEEEETTTTEEEEEE------TTTTEEEEEETTSCCEEEEECSS---CSCC
T ss_pred ccceeeccCCCcEEEEecC-----CCccEEEEEecCCCeEEEEe------CCCCcEEEEecCCCCcEEEEeCC---CCCc
Confidence 5677888877665554431 1122333333 57899863 33468999999887665553331 1111
Q ss_pred cceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCc-EEEEE--CCEEEEEeeeCCCCcccEE
Q 020245 126 YHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGP-GLIVT--QGKIWVVYGFAGVEVDDVH 201 (329)
Q Consensus 126 ~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~~--~~~l~v~gG~~~~~~~~~~ 201 (329)
...++. .+++||+.-.. ...++++++....-+.+... ..... .+++. ++.||+.-.. ....|+
T Consensus 162 ~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~-----~l~~P~giavdp~~g~ly~td~~---~~~~I~ 228 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQ-----SLEKPRAIALHPMEGTIYWTDWG---NTPRIE 228 (386)
T ss_dssp CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECS-----SCSCEEEEEEETTTTEEEEEECS---SSCEEE
T ss_pred cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecC-----CCCCCcEEEEEcCCCeEEEeccC---CCCEEE
Confidence 222223 47899987432 24678888765543333221 11122 22333 5788886421 136899
Q ss_pred EEeCCCCceEEeeccCCCCCCcceeEEEE--ECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCC
Q 020245 202 CFDPAHAQWAQVETSGEKPTARSVFSTVG--IGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSD 279 (329)
Q Consensus 202 ~~d~~~~~w~~~~~~~~~p~~r~~~~~~~--~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~ 279 (329)
+++++...-+.+.... .....+++. .++.||+.-.. ...|+++|++...-+.+..
T Consensus 229 r~~~dG~~~~~~~~~~----~~~PnGlavd~~~~~lY~aD~~--------------~~~I~~~d~dG~~~~~~~~----- 285 (386)
T 3v65_B 229 ASSMDGSGRRIIADTH----LFWPNGLTIDYAGRRMYWVDAK--------------HHVIERANLDGSHRKAVIS----- 285 (386)
T ss_dssp EEETTSCSCEEEECSS----CSCEEEEEEEGGGTEEEEEETT--------------TTEEEEECTTSCSCEEEEC-----
T ss_pred EEeCCCCCcEEEEECC----CCCeeeEEEeCCCCEEEEEECC--------------CCEEEEEeCCCCeeEEEEE-----
Confidence 9998765554443211 112234443 36799998542 3578999987543333332
Q ss_pred CCCCCCCcceecccccCCcceEEEEc
Q 020245 280 HHPGPRGWCAFAGGLRGGKHGLLVYG 305 (329)
Q Consensus 280 ~~p~~r~~~~~~~~~~~~~~~i~i~G 305 (329)
....+ ..++++.. +.||+.-
T Consensus 286 -~~~~~---P~giav~~--~~ly~td 305 (386)
T 3v65_B 286 -QGLPH---PFAITVFE--DSLYWTD 305 (386)
T ss_dssp -SSCSS---EEEEEEET--TEEEEEE
T ss_pred -CCCCC---ceEEEEEC--CEEEEee
Confidence 11111 14555544 4588765
No 263
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.84 E-value=19 Score=29.07 Aligned_cols=108 Identities=8% Similarity=0.041 Sum_probs=53.5
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCC--CcEEEcccCCCCCCCcccceeEee---CCeEEEEcccCCCcCcceeEEEEc
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRT--NQWTLLSNGDAGPPHRSYHSTAAD---DRHVYIFGGCGVSGRLNDLWGFDV 156 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~ 156 (329)
++++++.|+.+ ..+..||..+ ..++...... .....-.++... ++.+++.|+.+ ..+..||+
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSD------QHIKVFKLDKDTSNWELSDSWR--AHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEE 88 (351)
T ss_dssp SSSEEEEEETT------SEEEEEEECSSSCCEEEEEEEE--CCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEE
T ss_pred CCCEEEEeeCC------CeEEEEECCCCCCcceecceec--cCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEec
Confidence 34555666544 3577777664 3444433321 011111222222 36777777765 35778888
Q ss_pred CCC-------eEEEecCCCCCCCCCCCcEEEEE-C--CEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 157 VDR-------KWIQYPSAGENCKGRGGPGLIVT-Q--GKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 157 ~~~-------~W~~~~~~~~~~~~~~~~~~~~~-~--~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
.+. .|..+.... .....-.++... + +.+++.++.+ ..+..||..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~ 144 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLN--DSKGSLYSVKFAPAHLGLKLACLGND----GILRLYDALEP 144 (351)
T ss_dssp CTTSCTTSSCSEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETT----CEEEEEECSST
T ss_pred CCCcccccccCcceeeeec--ccCCceeEEEEcCCCCCcEEEEecCC----CcEEEecCCCh
Confidence 764 334444332 112222223333 2 5567777654 46788887554
No 264
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=80.89 E-value=19 Score=28.44 Aligned_cols=151 Identities=7% Similarity=-0.015 Sum_probs=81.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.||+.-.. .+.+.++|+....-+.+.... + .+ -..++.. ++.||+.... .....++++++.
T Consensus 90 ~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~-~--~~-P~~i~vd~~~g~lyv~~~~----~~~~~I~~~~~d 154 (267)
T 1npe_A 90 GRTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTG-L--VN-PRGIVTDPVRGNLYWTDWN----RDNPKIETSHMD 154 (267)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCSCEEEECSS-C--SS-EEEEEEETTTTEEEEEECC----SSSCEEEEEETT
T ss_pred CCeEEEEECC-------CCEEEEEEcCCCCEEEEEECC-C--CC-ccEEEEeeCCCEEEEEECC----CCCcEEEEEecC
Confidence 4688886542 257888888754433333211 1 11 1233443 5789997421 124578888887
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-e-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-D-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGK 185 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
...-+.+... .... -..++. . +++||+.--. .+.+.++++....-..+.... ..-..++..++.
T Consensus 155 g~~~~~~~~~---~~~~-P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~-----~~P~gi~~d~~~ 220 (267)
T 1npe_A 155 GTNRRILAQD---NLGL-PNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGL-----QYPFAVTSYGKN 220 (267)
T ss_dssp SCCCEEEECT---TCSC-EEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECC-----CSEEEEEEETTE
T ss_pred CCCcEEEEEC---CCCC-CcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCC-----CCceEEEEeCCE
Confidence 5443333222 1111 122232 2 5688887432 267899998765433332211 111344556788
Q ss_pred EEEEeeeCCCCcccEEEEeCCCCceEEe
Q 020245 186 IWVVYGFAGVEVDDVHCFDPAHAQWAQV 213 (329)
Q Consensus 186 l~v~gG~~~~~~~~~~~~d~~~~~w~~~ 213 (329)
+|+..... +.+.++|+.+.+-...
T Consensus 221 lyva~~~~----~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 221 LYYTDWKT----NSVIAMDLAISKEMDT 244 (267)
T ss_dssp EEEEETTT----TEEEEEETTTTEEEEE
T ss_pred EEEEECCC----CeEEEEeCCCCCceEE
Confidence 99865322 6899999987665443
No 265
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.54 E-value=37 Score=31.57 Aligned_cols=81 Identities=19% Similarity=0.246 Sum_probs=48.0
Q ss_pred eEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceE
Q 020245 25 AITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELY 102 (329)
Q Consensus 25 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 102 (329)
+.++.+++||+... ...++.+|..+.+ |+...............+.++.++.+|+-.+.. .......++
T Consensus 116 ~~~~~~g~v~v~~~--------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~-~~~~~g~v~ 186 (689)
T 1yiq_A 116 GVAVWKGKVYVGVL--------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGA-EFGVRGYVT 186 (689)
T ss_dssp CCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCT-TTCCBCEEE
T ss_pred ccEEECCEEEEEcc--------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCC-ccCCCCEEE
Confidence 34567888888542 2679999998765 765432010111222334456788888743322 122345799
Q ss_pred EEECCCCc--EEEc
Q 020245 103 SFDTRTNQ--WTLL 114 (329)
Q Consensus 103 ~~d~~~~~--W~~~ 114 (329)
.||..+.+ |+.-
T Consensus 187 a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 187 AYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEec
Confidence 99998764 8754
No 266
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=79.52 E-value=25 Score=28.94 Aligned_cols=156 Identities=10% Similarity=0.087 Sum_probs=74.4
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCCCceEEEECCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDGTHKELNELYSFDTRT 108 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~ 108 (329)
++.+++.|+.+ ..+..||+.+.+-....... ....-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCC---SSCCCCEEEECTTSCEEEEECTT------SCEEEEESSC
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecC---CCCceEEEEECCCCCEEEEEcCC------CEEEEEECCC
Confidence 44566666642 57889999877754333211 1111122222 256777777655 4788999887
Q ss_pred CcEE--EcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCCCeEE-EecCCCCCCCCCCCcEEEEE-C
Q 020245 109 NQWT--LLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWI-QYPSAGENCKGRGGPGLIVT-Q 183 (329)
Q Consensus 109 ~~W~--~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~-~~~~~~~~~~~~~~~~~~~~-~ 183 (329)
.+-. .+... +...-.++. .-++..++.|+ + +.+..||+.+.+-. .+.............+++.. +
T Consensus 202 ~~~~~~~~~~~----h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 202 PDQASSRFPVD----EEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp TTSCCEECCCC----TTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred CCCCccEEecc----CCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 6532 22220 111111122 22566666666 2 26888998875411 11110000011111123333 4
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCceEE
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQWAQ 212 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w~~ 212 (329)
++.++.++. ++..-.+|.++.....|..
T Consensus 272 g~~l~~~s~-~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 272 GKNMIAYSN-ESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp SSEEEEEET-TTTEEEEEEECTTTCSEEE
T ss_pred CCEEEEecC-CCCcEEEEEEcccccceEe
Confidence 556666443 1122345555556777987
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=78.91 E-value=25 Score=28.77 Aligned_cols=181 Identities=9% Similarity=-0.022 Sum_probs=96.0
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCC----CcEEEcccCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRT----NQWTLLSNGDAGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~----~~W~~~~~~~~~p 121 (329)
+++.++|+.+.+...+... ...-.+++.. ++.||+.-- ....++++|+.+ ..-..+-..+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-----~~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~~--- 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD--- 75 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-----CSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSS---
T ss_pred CeEEEEECCCcceEehhcC-----CCceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeCC---
Confidence 5688899887766554321 1222444443 468999742 346899999876 2222221111
Q ss_pred CCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE--ECCEEEEEeeeCCCCcc
Q 020245 122 PHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV--TQGKIWVVYGFAGVEVD 198 (329)
Q Consensus 122 ~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~l~v~gG~~~~~~~ 198 (329)
..+-...++. .+++||+.-.. ...+.++++....-..+.... .. .-...++ .++.||+.... ...
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~---~~-~P~~iavdp~~g~ly~~d~~---~~~ 143 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFREN---GS-KPRAIVVDPVHGFMYWTDWG---TPA 143 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECT---TC-CEEEEEEETTTTEEEEEECS---SSC
T ss_pred CCCcCEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECC---CC-CcceEEeCCCCCEEEEEccC---CCC
Confidence 1111222222 47899997332 257889998765444333211 11 1123333 36788887521 125
Q ss_pred cEEEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEee
Q 020245 199 DVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRW 272 (329)
Q Consensus 199 ~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 272 (329)
.+++++++...-+.+... ......+++.- ++.||+.-.. ...|+++|.+...-+.+
T Consensus 144 ~I~~~~~dG~~~~~~~~~----~~~~P~gla~d~~~~~lY~~D~~--------------~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 144 KIKKGGLNGVDIYSLVTE----NIQWPNGITLDLLSGRLYWVDSK--------------LHSISSIDVNGGNRKTI 201 (316)
T ss_dssp EEEEEETTSCCEEEEECS----SCSCEEEEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEE
T ss_pred eEEEEcCCCCCeEEEEEC----CCCCceEEEEeccCCEEEEEECC--------------CCeEEEEecCCCceEEE
Confidence 899999865544444321 11223344443 5689988643 35789999876433333
No 268
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=78.43 E-value=40 Score=30.76 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=43.3
Q ss_pred ECCE----EEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceE
Q 020245 29 VGQK----VYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELY 102 (329)
Q Consensus 29 ~~~~----l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 102 (329)
.+++ ||+... ...++.+|..+.+ |+.-.... .+......+-++.++.||+-.+.. .......++
T Consensus 116 ~~g~~~~rV~v~t~--------dg~l~AlDa~TG~~~W~~~~~~~-~~~~~~~ssP~v~~g~V~vg~~g~-e~g~~g~v~ 185 (599)
T 1w6s_A 116 GDGKTPALILKTQL--------DGNVAALNAETGETVWKVENSDI-KVGSTLTIAPYVVKDKVIIGSSGA-ELGVRGYLT 185 (599)
T ss_dssp CCSSSCCEEEEECT--------TSEEEEEETTTCCEEEEEECCCG-GGTCBCCSCCEEETTEEEECCBCG-GGTCCCEEE
T ss_pred cCCcceeEEEEEcC--------CCEEEEEECCCCCEEEeecCCCC-CccceeecCCEEECCEEEEEeccc-ccCCCCeEE
Confidence 4666 877542 2579999988765 66432210 001122233455788887743321 112345799
Q ss_pred EEECCCC--cEEEcc
Q 020245 103 SFDTRTN--QWTLLS 115 (329)
Q Consensus 103 ~~d~~~~--~W~~~~ 115 (329)
.||..+. .|+.-.
T Consensus 186 A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 186 AYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEETTTCCEEEEEES
T ss_pred EEECCCCcEEEEEcC
Confidence 9999876 477543
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=78.43 E-value=28 Score=29.03 Aligned_cols=174 Identities=9% Similarity=-0.032 Sum_probs=95.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE--ECCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA--VGHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.||+.--. .+.++++++.....+.+.... +..+ ..+++ .++.||+.- ...+.++++++.
T Consensus 84 ~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~-~~~p---~glavd~~~g~ly~~d------~~~~~I~~~~~d 146 (349)
T 3v64_C 84 RELVFWSDVT-------LDRILRANLNGSNVEEVVSTG-LESP---GGLAVDWVHDKLYWTD------SGTSRIEVANLD 146 (349)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCSCEEEECSS-CSCC---CEEEEETTTTEEEEEE------TTTTEEEEEETT
T ss_pred ccEEEEEecc-------CCceEEEecCCCCceEEEeCC-CCCc---cEEEEecCCCeEEEEc------CCCCeEEEEcCC
Confidence 4577776431 257888888876655544322 1111 23344 367899863 234689999987
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC-cEEEE--EC
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG-PGLIV--TQ 183 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~~--~~ 183 (329)
...-+.+.... ...| ...++. .++.||+.--.. ...++++++....-+.+... .... ..+++ .+
T Consensus 147 G~~~~~l~~~~-l~~P--~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~-----~~~~PnGla~d~~~ 214 (349)
T 3v64_C 147 GAHRKVLLWQS-LEKP--RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADT-----HLFWPNGLTIDYAG 214 (349)
T ss_dssp SCSCEEEECTT-CSCE--EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCCS-----SCSCEEEEEEETTT
T ss_pred CCceEEEEeCC-CCCc--ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEEC-----CCCCcceEEEeCCC
Confidence 65433332221 1122 122222 367888874221 36799999876544433321 1222 23333 36
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcC
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGG 240 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG 240 (329)
+.||+.-. ....|+++|++...-+.+... . .....++++.++.||+...
T Consensus 215 ~~lY~aD~----~~~~I~~~~~dG~~~~~~~~~-~---~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 215 RRMYWVDA----KHHVIERANLDGSHRKAVISQ-G---LPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp TEEEEEET----TTTEEEEEETTSCSCEEEECS-S---CSSEEEEEEETTEEEEEET
T ss_pred CEEEEEEC----CCCEEEEEeCCCCceEEEEeC-C---CCCceEEEEECCEEEEecC
Confidence 78998753 236899999875444444321 1 1234566668889999864
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.37 E-value=30 Score=29.34 Aligned_cols=185 Identities=8% Similarity=-0.035 Sum_probs=101.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.||+.--. .+.++++++.....+.+.... +..+ ..+++. ++.||+.-. ....++++++.
T Consensus 127 ~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~-~~~p---~glavd~~~g~lY~~d~------~~~~I~~~~~d 189 (386)
T 3v65_B 127 RELVFWSDVT-------LDRILRANLNGSNVEEVVSTG-LESP---GGLAVDWVHDKLYWTDS------GTSRIEVANLD 189 (386)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCCEEEEECSS-CSCC---CCEEEETTTTEEEEEET------TTTEEEECBTT
T ss_pred CCeEEEEeCC-------CCcEEEEecCCCCcEEEEeCC-CCCc---cEEEEEeCCCeEEEEcC------CCCeEEEEeCC
Confidence 4678876431 267889998877665554322 2111 233333 678998632 34578888877
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE--ECC
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV--TQG 184 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~ 184 (329)
...-+.+...+ ...| ...++. .++.||+.--. ....++++++....-+.+.... ...-..+++ .++
T Consensus 190 g~~~~~l~~~~-l~~P--~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~~----~~~PnGlavd~~~~ 258 (386)
T 3v65_B 190 GAHRKVLLWQS-LEKP--RAIALHPMEGTIYWTDWG----NTPRIEASSMDGSGRRIIADTH----LFWPNGLTIDYAGR 258 (386)
T ss_dssp SCSCEEEECSS-CSCE--EEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEECSS----CSCEEEEEEEGGGT
T ss_pred CCceEEeecCC-CCCC--cEEEEEcCCCeEEEeccC----CCCEEEEEeCCCCCcEEEEECC----CCCeeeEEEeCCCC
Confidence 55433332221 0111 122222 36788887321 1367999998765433333221 111223333 368
Q ss_pred EEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 185 KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 185 ~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
+||+.-. ....|+++|.+...-+.+... . .....++++.++.||+..-. ...|.++|.
T Consensus 259 ~lY~aD~----~~~~I~~~d~dG~~~~~~~~~-~---~~~P~giav~~~~ly~td~~--------------~~~V~~~~~ 316 (386)
T 3v65_B 259 RMYWVDA----KHHVIERANLDGSHRKAVISQ-G---LPHPFAITVFEDSLYWTDWH--------------TKSINSANK 316 (386)
T ss_dssp EEEEEET----TTTEEEEECTTSCSCEEEECS-S---CSSEEEEEEETTEEEEEETT--------------TTEEEEEET
T ss_pred EEEEEEC----CCCEEEEEeCCCCeeEEEEEC-C---CCCceEEEEECCEEEEeeCC--------------CCeEEEEEC
Confidence 8998753 336899999865444444321 1 12335666688899998642 246788884
No 271
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=77.77 E-value=44 Score=30.86 Aligned_cols=106 Identities=8% Similarity=-0.028 Sum_probs=52.3
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccC---CCCCCCceEEEECCCCcE---EEcccCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDG---THKELNELYSFDTRTNQW---TLLSNGDAGP 121 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~~d~~~~~W---~~~~~~~~~p 121 (329)
..++.+|..+.+-+.+.................-+++.++++.... .......++.+|..+++. .++.
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~------ 109 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP------ 109 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC------
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC------
Confidence 5799999998886655432100000011112222455444443210 001235799999988765 2221
Q ss_pred CCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecC
Q 020245 122 PHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPS 166 (329)
Q Consensus 122 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~ 166 (329)
.........-+++.++++.. ..++.++..+++-..+..
T Consensus 110 -~~~~~~~~SPDG~~la~~~~------~~i~~~~~~~g~~~~l~~ 147 (719)
T 1z68_A 110 -RPIQYLCWSPVGSKLAYVYQ------NNIYLKQRPGDPPFQITF 147 (719)
T ss_dssp -SSBCCEEECSSTTCEEEEET------TEEEEESSTTSCCEECCC
T ss_pred -cccccceECCCCCEEEEEEC------CeEEEEeCCCCCcEEEec
Confidence 11122222335544444421 478888888776665543
No 272
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=73.87 E-value=40 Score=28.47 Aligned_cols=121 Identities=14% Similarity=0.020 Sum_probs=58.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE-ECCEEEEEccccC---CCCCCCceEEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA-VGHTIYMFGGRDG---THKELNELYSFD 105 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~---~~~~~~~~~~~d 105 (329)
...+|+.-+.... .. ..+.+||+.+.+-. .. +|.....+.... .+..+|+..-... .....+.+..||
T Consensus 32 ~~~~yv~~~~~~~--~~-~~v~v~D~~t~~~~--~~---i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 32 GRRSYINLPAHHS--AI-IQQWVLDAGSGSIL--GH---VNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCEEEEeCCcccC--Cc-cEEEEEECCCCeEE--EE---ecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 3478887541111 01 17899999876632 22 222222222222 3557888752210 112346788999
Q ss_pred CCCCcEE-EcccCCC-----CCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEe
Q 020245 106 TRTNQWT-LLSNGDA-----GPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQY 164 (329)
Q Consensus 106 ~~~~~W~-~~~~~~~-----~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~ 164 (329)
+.+.+-. .++..+. ...++ ......-+..+|+..-.. .+.+..+| .+++-...
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~~l~v~n~~~----~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNADLLFFQFAA----GPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCcc-ceEECCCCCEEEEEecCC----CCeEEEEE-CCCCEEeE
Confidence 9876432 2222100 01122 112222345677653211 25788899 88765433
No 273
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=73.71 E-value=52 Score=29.76 Aligned_cols=151 Identities=11% Similarity=-0.015 Sum_probs=74.7
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCC---CCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCC
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGEN---CKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHA 208 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~---~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~ 208 (329)
++++++.|+.+ ..+..||..+.+-...-..... .....-.+++.. +++.++.++.+ ..+..+|..+.
T Consensus 201 dg~~las~s~D-----~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D----~~v~lWd~~~~ 271 (611)
T 1nr0_A 201 DGSLFASTGGD-----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD----KTIKIWNVATL 271 (611)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT----SEEEEEETTTT
T ss_pred CCCEEEEEECC-----CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC----CeEEEEeCCCC
Confidence 66777877765 4688899887765433211000 011111222222 56777777755 57888898776
Q ss_pred ceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCCCCCcc
Q 020245 209 QWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPGPRGWC 288 (329)
Q Consensus 209 ~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~~r~~~ 288 (329)
+....-... . ........+..++..++.++.+ ..+..+|++...-...-. .....-
T Consensus 272 ~~~~~~~~~-~-~~~~~~~~~~~~~~~l~s~s~d--------------~~i~~~~~~~~~~~~~~~-------gh~~~v- 327 (611)
T 1nr0_A 272 KVEKTIPVG-T-RIEDQQLGIIWTKQALVSISAN--------------GFINFVNPELGSIDQVRY-------GHNKAI- 327 (611)
T ss_dssp EEEEEEECC-S-SGGGCEEEEEECSSCEEEEETT--------------CCEEEEETTTTEEEEEEC-------CCSSCE-
T ss_pred ceeeeecCC-C-CccceeEEEEEcCCEEEEEeCC--------------CcEEEEeCCCCCcceEEc-------CCCCCE-
Confidence 654432211 0 1111122233455555555532 356677877665322221 111111
Q ss_pred eecccccCCcceEEEEcCCCCCCCcccceEEEeccc
Q 020245 289 AFAGGLRGGKHGLLVYGGNSPSNDRLDDIYFFTPCL 324 (329)
Q Consensus 289 ~~~~~~~~~~~~i~i~GG~~~~~~~~~~v~~~~~~~ 324 (329)
.+++...+ +..++.|+.+. .|.++|+.+
T Consensus 328 -~~l~~spd-g~~l~s~s~D~------~v~~Wd~~~ 355 (611)
T 1nr0_A 328 -TALSSSAD-GKTLFSADAEG------HINSWDIST 355 (611)
T ss_dssp -EEEEECTT-SSEEEEEETTS------CEEEEETTT
T ss_pred -EEEEEeCC-CCEEEEEeCCC------cEEEEECCC
Confidence 23333333 44777777653 455555543
No 274
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=73.54 E-value=36 Score=27.78 Aligned_cols=144 Identities=13% Similarity=0.114 Sum_probs=72.9
Q ss_pred CCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECC-EEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 47 DNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGH-TIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 47 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
...++.+|..+.+-+.+.. .......-++ .|++.. .. .......++.+|..+.+...+... +. .
T Consensus 42 ~~~l~~~d~~~~~~~~l~~--------~~~~~~SpDg~~la~~~-~~-~~~~~~~l~~~~~~~g~~~~l~~~---~~--~ 106 (347)
T 2gop_A 42 ENTIVIENLKNNARRFIEN--------ATMPRISPDGKKIAFMR-AN-EEKKVSEIWVADLETLSSKKILEA---KN--I 106 (347)
T ss_dssp EEEEEEEETTTCCEEEEES--------CEEEEECTTSSEEEEEE-EE-TTTTEEEEEEEETTTTEEEEEEEE---SE--E
T ss_pred cceEEEEeCCCCceEEccc--------CCCeEECCCCCEEEEEE-ec-cCCCcceEEEEECCCCceEEEEcC---CC--c
Confidence 4679999998877655510 1111111133 344332 22 112345699999988877666543 11 1
Q ss_pred cceeEeeCCeEEEEcccCC------------------C----cCcceeEEEEcCCCeE-EEecCCCCCCCCCCCcEEEEE
Q 020245 126 YHSTAADDRHVYIFGGCGV------------------S----GRLNDLWGFDVVDRKW-IQYPSAGENCKGRGGPGLIVT 182 (329)
Q Consensus 126 ~~~~~~~~~~i~v~GG~~~------------------~----~~~~~~~~~~~~~~~W-~~~~~~~~~~~~~~~~~~~~~ 182 (329)
......-+++.+++..... . .....++.+|+.+++. ..+.. + ........
T Consensus 107 ~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~s 179 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWH 179 (347)
T ss_dssp EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEE
T ss_pred cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCC
Confidence 1111122454444433210 0 1135789999998887 55543 1 22233344
Q ss_pred CCEEEEEeeeCCC----C-cccEEEEeCCCCceEEee
Q 020245 183 QGKIWVVYGFAGV----E-VDDVHCFDPAHAQWAQVE 214 (329)
Q Consensus 183 ~~~l~v~gG~~~~----~-~~~~~~~d~~~~~w~~~~ 214 (329)
.+.+++.+..... . ...++.+| +.+++.+.
T Consensus 180 pdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 180 RDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp TTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred CCeEEEEEecccccccccccccEEEeC--CCceEEec
Confidence 4435555533321 1 45788888 66666665
No 275
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=69.28 E-value=52 Score=27.90 Aligned_cols=152 Identities=12% Similarity=0.075 Sum_probs=78.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.+++.|+.+ ..+..||+.+.+-...-.. +.....-.++.+ ++.+++.|+.+ ..+..||..
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~ 244 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDIRTLERLQIIEN---SPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIR 244 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEETTTCCEEEEEEC---CGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeEEEcc---CCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcC
Confidence 36677777642 6789999987654322211 101112223333 45666767655 468899998
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-----eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCC--C------C---
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-----DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGE--N------C--- 171 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-----~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~--~------~--- 171 (329)
+.+....-..+ ....-.++.. -++++++.|+.+ ..+..||..+.+-...-.... . |
T Consensus 245 ~~~~~~~~~~~---~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T 3gre_A 245 FNVLIRSWSFG---DHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEK 316 (437)
T ss_dssp TTEEEEEEBCT---TCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCS
T ss_pred CccEEEEEecC---CCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceeccccc
Confidence 76543321111 1111111111 134555655543 468889988775322221100 0 0
Q ss_pred -----------CCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCc
Q 020245 172 -----------KGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 172 -----------~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
....-.+++..++.+++.|+.+ ..+..||+.+.+
T Consensus 317 ~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d----~~i~~wd~~~~~ 361 (437)
T 3gre_A 317 GLEELNFCGIRSLNALSTISVSNDKILLTDEAT----SSIVMFSLNELS 361 (437)
T ss_dssp SGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGG----TEEEEEETTCGG
T ss_pred ccccceecccccCCceEEEEECCceEEEecCCC----CeEEEEECCCcc
Confidence 0111223344477788888765 578889987654
No 276
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=69.15 E-value=66 Score=29.06 Aligned_cols=183 Identities=13% Similarity=0.092 Sum_probs=89.2
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCC---CC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAG---PP 122 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~---p~ 122 (329)
..+..||..+.+.. .... .....-.++.+ ++++++.|+.+ ..+..+|..+.+-...-..... .+
T Consensus 170 ~~v~lwd~~~~~~~--~~l~---~H~~~V~~v~fspdg~~las~s~D------~~i~lwd~~~g~~~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 170 NTVAIFEGPPFKFK--STFG---EHTKFVHSVRYNPDGSLFASTGGD------GTIVLYNGVDGTKTGVFEDDSLKNVAH 238 (611)
T ss_dssp SCEEEEETTTBEEE--EEEC---CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEECBCTTSSSCSS
T ss_pred CeEEEEECCCCeEe--eeec---cccCceEEEEECCCCCEEEEEECC------CcEEEEECCCCcEeeeecccccccccc
Confidence 56777886654332 2211 11111222333 45677777655 4688888877654322111000 01
Q ss_pred CcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEE
Q 020245 123 HRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVH 201 (329)
Q Consensus 123 ~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~ 201 (329)
...-.++.. -+++.++.|+.+ ..+..||..+.+....-.... ........+..++..++.++.+ ..+.
T Consensus 239 ~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~s~s~d----~~i~ 307 (611)
T 1nr0_A 239 SGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGT--RIEDQQLGIIWTKQALVSISAN----GFIN 307 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SGGGCEEEEEECSSCEEEEETT----CCEE
T ss_pred CCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCC--CccceeEEEEEcCCEEEEEeCC----CcEE
Confidence 111111222 256777777754 468899998887654433211 1111222233456666666544 4566
Q ss_pred EEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEe
Q 020245 202 CFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTR 271 (329)
Q Consensus 202 ~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 271 (329)
.+|+...+-..... . .... ..++.+ +++.++.|+.+ ..+..+|+.+..-..
T Consensus 308 ~~~~~~~~~~~~~~--g--h~~~-v~~l~~spdg~~l~s~s~D--------------~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 308 FVNPELGSIDQVRY--G--HNKA-ITALSSSADGKTLFSADAE--------------GHINSWDISTGISNR 360 (611)
T ss_dssp EEETTTTEEEEEEC--C--CSSC-EEEEEECTTSSEEEEEETT--------------SCEEEEETTTCCEEE
T ss_pred EEeCCCCCcceEEc--C--CCCC-EEEEEEeCCCCEEEEEeCC--------------CcEEEEECCCCceee
Confidence 77876654322211 1 1111 122222 55666666642 357788887765443
No 277
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=68.28 E-value=62 Score=28.37 Aligned_cols=125 Identities=13% Similarity=0.012 Sum_probs=61.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCC----cEEEEeeCCCC----CCCCcceeEEEECCEEEEEccccCCCCCCCce
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETL----TWSVADVTGDV----PPPRVGVTMAAVGHTIYMFGGRDGTHKELNEL 101 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 101 (329)
..+||+-|.. ++.++++|..++ +-.....+.++ ...+-++..+.-++ |||-.-.+........+
T Consensus 95 r~~l~v~~l~-------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 95 RRFLIVPGLR-------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp SCEEEEEBTT-------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred CCEEEEccCC-------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 4467776653 278999998765 32222210001 01122233333345 77633222234455789
Q ss_pred EEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcc----------cCCC----cCcceeEEEEcCCCeEE
Q 020245 102 YSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGG----------CGVS----GRLNDLWGFDVVDRKWI 162 (329)
Q Consensus 102 ~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG----------~~~~----~~~~~~~~~~~~~~~W~ 162 (329)
..+|..+.+-...-..+..|.....-....-+.++++.-- .... ...+.+..||..+.+-.
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 9999998754322222211222222122223444445442 1111 34688999999987533
No 278
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=68.27 E-value=54 Score=27.74 Aligned_cols=68 Identities=7% Similarity=-0.085 Sum_probs=34.7
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCC--eEEEecCCCCC--CCCCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeCC
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDR--KWIQYPSAGEN--CKGRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~--~W~~~~~~~~~--~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
++++++.| . + ..+..||+.+. ....+...+.. .....-.+++.. ++ .+++.|+.+ ..+..||..
T Consensus 188 ~~~~l~s~-~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~ 257 (447)
T 3dw8_B 188 DYETYLSA-D-D----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK----GTIRLCDMR 257 (447)
T ss_dssp TSSEEEEE-C-S----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT----SCEEEEETT
T ss_pred CCCEEEEe-C-C----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC----CeEEEEECc
Confidence 55666665 3 2 57888888732 22222111100 111112222333 34 677777755 478888987
Q ss_pred CCce
Q 020245 207 HAQW 210 (329)
Q Consensus 207 ~~~w 210 (329)
+.+-
T Consensus 258 ~~~~ 261 (447)
T 3dw8_B 258 ASAL 261 (447)
T ss_dssp TCSS
T ss_pred CCcc
Confidence 7653
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=68.04 E-value=46 Score=26.85 Aligned_cols=150 Identities=10% Similarity=0.006 Sum_probs=77.5
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
+++||+.-- ....++++|+.+.. ...-..+ .+-...++.-++++|+...... ...++++++.+.+.
T Consensus 42 ~g~lyv~d~------~~~~I~~~d~~g~~-~~~~~~~----~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 42 DGTIFVTNH------EVGEIVSITPDGNQ-QIHATVE----GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTV 107 (306)
T ss_dssp TSCEEEEET------TTTEEEEECTTCCE-EEEEECS----SEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCE
T ss_pred CCCEEEEeC------CCCeEEEECCCCce-EEEEeCC----CCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeE
Confidence 567888642 23579999988653 3222221 1222222233678888753211 13588899888887
Q ss_pred EEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEE--eeccC--CCC--CCcceeEEEEECCE
Q 020245 162 IQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQ--VETSG--EKP--TARSVFSTVGIGKH 234 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~--~~~~~--~~p--~~r~~~~~~~~~~~ 234 (329)
+.+...+ ..+.....+. .++.+|+... ....++++|+...+-+. ..... ..+ ......++..-++.
T Consensus 108 ~~~~~~~---~~~~~~g~~~~~~~~~~v~d~----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ 180 (306)
T 2p4o_A 108 ETLLTLP---DAIFLNGITPLSDTQYLTADS----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNF 180 (306)
T ss_dssp EEEEECT---TCSCEEEEEESSSSEEEEEET----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTE
T ss_pred EEEEeCC---CccccCcccccCCCcEEEEEC----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCE
Confidence 7766552 2333333332 2445666532 22589999987542221 11100 011 11122233333557
Q ss_pred EEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 235 IVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 235 i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
||+.--. .+.|++||++.
T Consensus 181 lyv~d~~--------------~~~I~~~~~~~ 198 (306)
T 2p4o_A 181 LYVSNTE--------------KMLLLRIPVDS 198 (306)
T ss_dssp EEEEETT--------------TTEEEEEEBCT
T ss_pred EEEEeCC--------------CCEEEEEEeCC
Confidence 8886532 35789999864
No 280
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=67.76 E-value=38 Score=26.41 Aligned_cols=105 Identities=15% Similarity=0.213 Sum_probs=58.6
Q ss_pred ECCEEEEEcCccCCCCccCCceEEEe--CCCCcEEE------EeeC-CCCC----CCCcceeEEE-ECCEEEEEccccCC
Q 020245 29 VGQKVYAFGGEFTPRVPVDNNLHVFD--LETLTWSV------ADVT-GDVP----PPRVGVTMAA-VGHTIYMFGGRDGT 94 (329)
Q Consensus 29 ~~~~l~~~GG~~~~~~~~~~~~~~~d--~~~~~W~~------~~~~-~~~p----~~r~~~~~~~-~~~~iyv~GG~~~~ 94 (329)
.++++|+|-| +.+|+|+ +.+..... +... ..+| .....++... .++++|+|-|
T Consensus 71 ~~g~~~fFKg---------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 71 ENNEAFIFYE---------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp STTEEEEEET---------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET----
T ss_pred CCCEEEEEeC---------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC----
Confidence 5789999998 6789998 32111111 1111 0133 2234444433 2579999966
Q ss_pred CCCCCceEEEECCCCcEE-----EcccCCCCCC------CcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCC
Q 020245 95 HKELNELYSFDTRTNQWT-----LLSNGDAGPP------HRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDR 159 (329)
Q Consensus 95 ~~~~~~~~~~d~~~~~W~-----~~~~~~~~p~------~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 159 (329)
+.+|+||..+++.. .+.. + .|. +..-.+++. .++++|+|-| +..|+||..++
T Consensus 138 ----~~yw~~d~~~~~~~~gyPk~i~~-g-~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 ----DQYARIDYGSNSMVNKEIKSISS-G-YPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp ----TEEEEEETTTTEESSSSCEEHHH-H-CGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred ----CEEEEEeCCCccccCCCCeEHHH-C-CCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 45999998765421 1111 0 111 111222333 3689999988 57899998776
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=67.72 E-value=53 Score=27.35 Aligned_cols=203 Identities=4% Similarity=-0.087 Sum_probs=109.2
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
+.+.++++.......+... ...-.+++.. ++.||+.- .....++++++.....+.+...+ ....
T Consensus 53 ~~I~~i~~~g~~~~~~~~~-----~~~~~~l~~d~~~~~ly~~D------~~~~~I~r~~~~g~~~~~~~~~~---~~~p 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRRELVFWSD------VTLDRILRANLNGSNVEEVVSTG---LESP 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECS-----CSCEEEEEEETTTTEEEEEE------TTTTEEEEEETTSCSCEEEECSS---CSCC
T ss_pred cceEEEeCCCCeeEEeecC-----CCceEEEEEeccccEEEEEe------ccCCceEEEecCCCCceEEEeCC---CCCc
Confidence 5688888887666554331 1112333333 57899863 33468999999876655543321 1111
Q ss_pred cceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC-cEEEEE--CCEEEEEeeeCCCCcccEE
Q 020245 126 YHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG-PGLIVT--QGKIWVVYGFAGVEVDDVH 201 (329)
Q Consensus 126 ~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~~~--~~~l~v~gG~~~~~~~~~~ 201 (329)
...++. .+++||+.-.. ...++++++....-+.+... .... ..+++. ++.||+.... ....++
T Consensus 119 ~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~-----~l~~P~~iavdp~~g~ly~td~~---~~~~I~ 185 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQ-----SLEKPRAIALHPMEGTIYWTDWG---NTPRIE 185 (349)
T ss_dssp CEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECT-----TCSCEEEEEEETTTTEEEEEECS---SSCEEE
T ss_pred cEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeC-----CCCCcceEEEecCcCeEEEeccC---CCCEEE
Confidence 222222 47899987432 25788898876543333321 1111 223333 5788887532 136899
Q ss_pred EEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCC
Q 020245 202 CFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSD 279 (329)
Q Consensus 202 ~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~ 279 (329)
+++++...-+.+... ......+++.- ++.||+.-.. ...|+++|++...=+.+..
T Consensus 186 r~~~dG~~~~~~~~~----~~~~PnGla~d~~~~~lY~aD~~--------------~~~I~~~~~dG~~~~~~~~----- 242 (349)
T 3v64_C 186 ASSMDGSGRRIIADT----HLFWPNGLTIDYAGRRMYWVDAK--------------HHVIERANLDGSHRKAVIS----- 242 (349)
T ss_dssp EEETTSCSCEESCCS----SCSCEEEEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEEEC-----
T ss_pred EEeCCCCCcEEEEEC----CCCCcceEEEeCCCCEEEEEECC--------------CCEEEEEeCCCCceEEEEe-----
Confidence 999876554444321 11122344433 6799998542 3578999987643333332
Q ss_pred CCCCCCCcceecccccCCcceEEEEcC
Q 020245 280 HHPGPRGWCAFAGGLRGGKHGLLVYGG 306 (329)
Q Consensus 280 ~~p~~r~~~~~~~~~~~~~~~i~i~GG 306 (329)
....+ ..++++.. +.||+.--
T Consensus 243 -~~~~~---P~giav~~--~~ly~td~ 263 (349)
T 3v64_C 243 -QGLPH---PFAITVFE--DSLYWTDW 263 (349)
T ss_dssp -SSCSS---EEEEEEET--TEEEEEET
T ss_pred -CCCCC---ceEEEEEC--CEEEEecC
Confidence 11111 14555544 45887643
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=65.74 E-value=89 Score=29.28 Aligned_cols=98 Identities=7% Similarity=0.031 Sum_probs=53.6
Q ss_pred cceeEEEEcCCC--eE--EEecCCCCCCCCCCCcEEE-EECCEEEEEeeeCCCCcccEEEEeCCC-CceEE-eeccCCCC
Q 020245 148 LNDLWGFDVVDR--KW--IQYPSAGENCKGRGGPGLI-VTQGKIWVVYGFAGVEVDDVHCFDPAH-AQWAQ-VETSGEKP 220 (329)
Q Consensus 148 ~~~~~~~~~~~~--~W--~~~~~~~~~~~~~~~~~~~-~~~~~l~v~gG~~~~~~~~~~~~d~~~-~~w~~-~~~~~~~p 220 (329)
...++.+|+.+. .+ ..+.... ........ ..++.+|+....++.....++.++.++ ..|+. +....
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~----~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~--- 366 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPRE----KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS--- 366 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCC----TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC---
T ss_pred CceEEEEECCCCCCCceeEEeecCC----CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC---
Confidence 467899998875 45 5554331 11111222 236778877644312346899999876 67876 54221
Q ss_pred CCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEEc
Q 020245 221 TARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDT 264 (329)
Q Consensus 221 ~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~ 264 (329)
...........++.|++..-... ...++++|+
T Consensus 367 ~~~~l~~~~~~~~~lv~~~~~~g------------~~~l~~~dl 398 (751)
T 2xe4_A 367 EDVFMESIAVRSNYLVVAGRRAG------------LTRIWTMMA 398 (751)
T ss_dssp SSEEEEEEEECSSEEEEEEEETT------------EEEEEEEEC
T ss_pred CCcEEEEEEEECCEEEEEEEeCC------------EEEEEEEec
Confidence 11122233344667776653211 457889986
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=65.68 E-value=60 Score=27.30 Aligned_cols=165 Identities=8% Similarity=0.073 Sum_probs=87.1
Q ss_pred CCEEEEEcCccCCCC-----ccCCceEEEeCC--CCcEEEEeeCCC-CC-CCCcceeEEEEC---C--EEEEEccccCCC
Q 020245 30 GQKVYAFGGEFTPRV-----PVDNNLHVFDLE--TLTWSVADVTGD-VP-PPRVGVTMAAVG---H--TIYMFGGRDGTH 95 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~-----~~~~~~~~~d~~--~~~W~~~~~~~~-~p-~~r~~~~~~~~~---~--~iyv~GG~~~~~ 95 (329)
++.+|+.-|...+.. .....++++|+. +.+-+++...+. .. ..-.-|.+.... + +|||..-.. .
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~--~ 137 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG--S 137 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST--T
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC--C
Confidence 457777654322111 124679999998 345555554431 11 122334444432 3 588874221 1
Q ss_pred CCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccC-C-----------CcCcceeEEEEcCCCeEEE
Q 020245 96 KELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCG-V-----------SGRLNDLWGFDVVDRKWIQ 163 (329)
Q Consensus 96 ~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~-~-----------~~~~~~~~~~~~~~~~W~~ 163 (329)
...-.++.+|+.+.....+......+..+..-..+.-++.+|+-.... . ......+++|++. +.+.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~ 215 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRV 215 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEE
Confidence 223356677777777776666544456666666677788988854321 1 1134678888884 3333
Q ss_pred ecCCCCCCCCCCCcEEEEE-C-CEEEEEeeeCCCCcccEEEEeCCC
Q 020245 164 YPSAGENCKGRGGPGLIVT-Q-GKIWVVYGFAGVEVDDVHCFDPAH 207 (329)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~-~~l~v~gG~~~~~~~~~~~~d~~~ 207 (329)
+... -......+.. + ..+|+.--. ...+++|+.+.
T Consensus 216 ~~~~-----l~~pNGia~spDg~~lYvadt~----~~~I~~~~~~~ 252 (355)
T 3sre_A 216 VAEG-----FDFANGINISPDGKYVYIAELL----AHKIHVYEKHA 252 (355)
T ss_dssp EEEE-----ESSEEEEEECTTSSEEEEEEGG----GTEEEEEEECT
T ss_pred eecC-----CcccCcceECCCCCEEEEEeCC----CCeEEEEEECC
Confidence 3221 0111222333 3 357876432 26899999854
No 284
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=64.04 E-value=89 Score=28.68 Aligned_cols=110 Identities=11% Similarity=-0.033 Sum_probs=56.8
Q ss_pred ceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCc----CcceeEEEEcCCCeEEEecCCCCCCCCCC
Q 020245 100 ELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSG----RLNDLWGFDVVDRKWIQYPSAGENCKGRG 175 (329)
Q Consensus 100 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 175 (329)
.++.+|..+.+-..+-................-+++.++++...... ....++.+|..+.+-..+...... ....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~ 116 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS-NAKL 116 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC-SCCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc-cccc
Confidence 68888887765544433211000011222233366666666533222 347899999998876656543211 1111
Q ss_pred CcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeec
Q 020245 176 GPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVET 215 (329)
Q Consensus 176 ~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~ 215 (329)
......-+++.++++.. ..++.+|..+.+...+..
T Consensus 117 ~~~~~SPdG~~la~~~~-----~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-----NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp SBCCBCSSTTCEEEEET-----TEEEEESSSSSCCEEEEC
T ss_pred cccEECCCCCEEEEEEC-----CeEEEEECCCCceEEEec
Confidence 22222335554444432 478888887777666553
No 285
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=63.75 E-value=95 Score=28.88 Aligned_cols=109 Identities=14% Similarity=-0.019 Sum_probs=51.3
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcce--eEEEECCEEEEEccccC---CCCCCCceEEEECCCCcEEEcccCCCCCC
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGV--TMAAVGHTIYMFGGRDG---THKELNELYSFDTRTNQWTLLSNGDAGPP 122 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~--~~~~~~~~iyv~GG~~~---~~~~~~~~~~~d~~~~~W~~~~~~~~~p~ 122 (329)
..++.||+.+++-..+-............ -...-+++..+++.... ......+++.||..+++..++... +.
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~---~~ 112 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI---PN 112 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CT
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccC---CC
Confidence 57999999988755443221111100001 11222444334433221 122346789999999876555432 11
Q ss_pred CcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecC
Q 020245 123 HRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPS 166 (329)
Q Consensus 123 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~ 166 (329)
........-+++.++++- + ..++.++..+.+-.+++.
T Consensus 113 -~~~~~~~SPdG~~la~~~-~-----~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 113 -NTQWVTWSPVGHKLAYVW-N-----NDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp -TEEEEEECSSTTCEEEEE-T-----TEEEEESSTTSCCEECCS
T ss_pred -cceeeEECCCCCEEEEEE-C-----CeEEEEECCCCceEEEcC
Confidence 111222222443334331 1 456777776665555443
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=61.22 E-value=77 Score=26.98 Aligned_cols=176 Identities=10% Similarity=0.075 Sum_probs=92.2
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCC----cEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETL----TWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
+++||+.--. .+.|+++++... ....+.... + ..-..+++. ++.||+.- .....+.+
T Consensus 123 ~~~lywsD~~-------~~~I~~~~~~g~~~~~~~~~~~~~~-~---~~p~glavD~~~~~lY~~d------~~~~~I~~ 185 (400)
T 3p5b_L 123 SNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRD-I---QAPDGLAVDWIHSNIYWTD------SVLGTVSV 185 (400)
T ss_dssp TTEEEEEETT-------TTEEEEEEC------CCCEEEECSS-C---SCEEEEEEETTTTEEEEEE------TTTTEEEE
T ss_pred cCceEEEecC-------CCeEEEEEcccCCCCCcceEEEeCC-C---CCcccEEEEecCCceEEEE------CCCCeEEE
Confidence 4677776432 156777877642 222222211 1 111233443 68899973 23457889
Q ss_pred EECCCCcEEEcccCCCCCCCcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE
Q 020245 104 FDTRTNQWTLLSNGDAGPPHRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV 181 (329)
Q Consensus 104 ~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 181 (329)
+|+....-+.+.... ...|+ .+++ .++.||+.--. ....++++++....-..+.... -..-..+++
T Consensus 186 ~~~~g~~~~~l~~~~-~~~P~---~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~~~~~~----l~~P~glav 253 (400)
T 3p5b_L 186 ADTKGVKRKTLFREN-GSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTEN----IQWPNGITL 253 (400)
T ss_dssp ECTTTCSEEEEEECS-SCCEE---EEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEEEECSS----CSCEEEEEE
T ss_pred EeCCCCceEEEEeCC-CCCcc---eEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEEEEECC----CCceEEEEE
Confidence 998876544443321 01122 2233 36788886421 1257889988765433332211 111122333
Q ss_pred E--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcC
Q 020245 182 T--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGG 240 (329)
Q Consensus 182 ~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG 240 (329)
. +++||+.-. ....|+++|.+...-+.+.... .......++++.++.||+.--
T Consensus 254 d~~~~~lY~aD~----~~~~I~~~d~dG~~~~~~~~~~--~~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 254 DLLSGRLYWVDS----KLHSISSIDVNGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp ETTTTEEEEEET----TTTEEEEEETTSCCCEEEEECS--STTSSEEEEEEETTEEEEEES
T ss_pred EeCCCEEEEEEC----CCCEEEEEeCCCCccEEEEeCC--CCCCCCEEEEEeCCEEEEecC
Confidence 3 578998743 3378999998765544444211 112234566678889999863
No 287
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=61.20 E-value=1.3e+02 Score=29.47 Aligned_cols=150 Identities=15% Similarity=0.064 Sum_probs=78.2
Q ss_pred CceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeE-EEEcCCCeEEEecCCCCCCCCCCCc
Q 020245 99 NELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLW-GFDVVDRKWIQYPSAGENCKGRGGP 177 (329)
Q Consensus 99 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~ 177 (329)
..++.++..+.....+... +..+....... +++.++++.. ...++ .++..+.+...+. . ......
T Consensus 317 ~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~-~----~~~~~~ 382 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEP---LRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE-E----NLGNVF 382 (1045)
T ss_dssp TEEEEECTTSSBEEECSCC---SCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC-C----CCCSEE
T ss_pred CEEEEEcCCCCceEEccCC---CcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEec-C----Ccccee
Confidence 4688888877765554322 11122222333 5555555443 25788 8999888766655 2 111222
Q ss_pred EEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeee
Q 020245 178 GLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFA 256 (329)
Q Consensus 178 ~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~ 256 (329)
.++. -+++.++++... ..++.+|..+.+-..+.... .......+..-+++.+++++...... ......
T Consensus 383 ~~~~SpDG~~la~~~~~----~~v~~~d~~tg~~~~~~~~~---~~~v~~~~~SpDG~~la~~~~~~~~~----~~~~~~ 451 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDR----FEIMTVDLETGKPTVIERSR---EAMITDFTISDNSRFIAYGFPLKHGE----TDGYVM 451 (1045)
T ss_dssp EEEECTTSSEEEEEETT----SEEEEEETTTCCEEEEEECS---SSCCCCEEECTTSCEEEEEEEECSST----TCSCCE
T ss_pred eeEECCCCCEEEEECCC----CeEEEEECCCCceEEeccCC---CCCccceEECCCCCeEEEEecCcccc----ccCCCC
Confidence 2333 356666665533 48999999888776665321 11112222233555555554321000 000113
Q ss_pred ceeEEEEcCCceeEeec
Q 020245 257 GELYSLDTETLVWTRWD 273 (329)
Q Consensus 257 ~~~~~~d~~~~~W~~~~ 273 (329)
..++.+|+++.....+.
T Consensus 452 ~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 452 QAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEEEEETTTTEEEECS
T ss_pred CeEEEEECCCCcEEEee
Confidence 57999999987755554
No 288
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=56.90 E-value=96 Score=26.77 Aligned_cols=124 Identities=14% Similarity=0.148 Sum_probs=73.7
Q ss_pred CCCCCCCcceeEEEECCEEEEEcCccCCCCccCCceEEEeCC-----CCcEEEEeeCCCCCCCCcceeEEEECCEEEEEc
Q 020245 15 GSGPGARSSHAITIVGQKVYAFGGEFTPRVPVDNNLHVFDLE-----TLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFG 89 (329)
Q Consensus 15 ~~~p~~r~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~-----~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~G 89 (329)
+-.|..-.-|+.|.+++.-|.+|=.+..-.+..-.++.|... .-.-++++.. .....+-.+.-.+++.||+.-
T Consensus 278 ~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se--y~~~AsEPCvkyYdgvLyLtT 355 (670)
T 3ju4_A 278 GLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE--YEPDASEPCIKYYDGVLYLIT 355 (670)
T ss_dssp CSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG--GCTTEEEEEEEEETTEEEEEE
T ss_pred ccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh--hccccccchhhhhCCEEEEEe
Confidence 335666778999999887778774332222211233333322 2222333332 212223334446799999886
Q ss_pred cccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEccc
Q 020245 90 GRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGC 142 (329)
Q Consensus 90 G~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 142 (329)
-.....+.-+.+.+-+.....|..+..... .....--.+..++.||+||-.
T Consensus 356 Rgt~~~~~GS~L~rs~d~Gq~w~slrfp~n--vHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 356 RGTRGDRLGSSLHRSRDIGQTWESLRFPHN--VHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EESCTTSCCCEEEEESSTTSSCEEEECTTC--CCSSCCCEEEETTEEEEEEEC
T ss_pred cCcCCCCCcceeeeecccCCchhheecccc--ccccCCCcceeCCEEEEEecc
Confidence 544355677788888888999998876532 223333345679999999964
No 289
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=54.20 E-value=94 Score=25.82 Aligned_cols=121 Identities=11% Similarity=0.123 Sum_probs=58.1
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccC---CCCCCCceEEEE
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDG---THKELNELYSFD 105 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~---~~~~~~~~~~~d 105 (329)
..+|+.-.... ....+.+++||+.+.+-..... .... ..++.. +..+|+..-... .....+.+..||
T Consensus 16 ~~~yv~~~~~~--~~~d~~v~v~D~~t~~~~~~i~-----~g~~-p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 16 NRIYVMDSVFM--HLTESRVHVYDYTNGKFLGMVP-----TAFN-GHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GEEEEEECCGG--GGGGCEEEEEETTTCCEEEEEE-----CCEE-EEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CEEEEECCCCC--ccccCeEEEEECCCCeEEEEec-----CCCC-CceEECCCCCEEEEEEecccccccCCCCCEEEEEE
Confidence 46777643211 1123689999988776432211 2221 222222 457888753210 011235689999
Q ss_pred CCCCcE-EEcccCCCCC-CCc-ccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEE
Q 020245 106 TRTNQW-TLLSNGDAGP-PHR-SYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQ 163 (329)
Q Consensus 106 ~~~~~W-~~~~~~~~~p-~~r-~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~ 163 (329)
+.+.+- ..++..+... ... -.+..+.- +..+|+..... .+++.++|..+.+-..
T Consensus 88 ~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~----~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 88 ADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP----ATSIGIVDVAKGDYVE 145 (361)
T ss_dssp TTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS----SEEEEEEETTTTEEEE
T ss_pred CcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC----CCeEEEEECCCCcEEE
Confidence 987643 3333221000 011 12222222 44666653211 2678889998876543
No 290
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=53.93 E-value=1.5e+02 Score=27.95 Aligned_cols=211 Identities=12% Similarity=0.125 Sum_probs=104.9
Q ss_pred CceEEEeCCCCcEEEEeeCC---CCCC---CCcceeEEEE----CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccC
Q 020245 48 NNLHVFDLETLTWSVADVTG---DVPP---PRVGVTMAAV----GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNG 117 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~---~~p~---~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~ 117 (329)
..+++-+-...+|+.+.... .++. .......+++ .+.+|+..|..........+++-+-.-.+|+++...
T Consensus 43 ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~ 122 (763)
T 3a0f_A 43 GGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSP 122 (763)
T ss_dssp SCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECS
T ss_pred CcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCC
Confidence 45888887788999876521 0011 1122233333 357888655321112224455544456789988743
Q ss_pred CCCC---CCccc-ceeEee---CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE----CCEE
Q 020245 118 DAGP---PHRSY-HSTAAD---DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT----QGKI 186 (329)
Q Consensus 118 ~~~p---~~r~~-~~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~l 186 (329)
...+ ..|.. ..+++. .+.+|+.+. . ..+++-+-.-.+|+++..++...........+.+ .+.+
T Consensus 123 ~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~-----~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (763)
T 3a0f_A 123 VPMGANDMGRNGGERLAVNPHWTDELWFGSR-T-----QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTA 196 (763)
T ss_dssp SCCCTTSTTTTSBCCEEECTTSTTCEEEECS-S-----SCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCE
T ss_pred cccCccccCccccceEEECCCCCCEEEEEeC-C-----CcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEE
Confidence 1110 12221 233332 357777532 1 3455554555699999865421111122222222 2457
Q ss_pred EEEeeeCCCCcccEEEEeCCCCceEEeeccCCCC-----------------CCcceeEEEEE-CCEEEEEcCccCCCCCC
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKP-----------------TARSVFSTVGI-GKHIVVYGGEVDPSDLG 248 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p-----------------~~r~~~~~~~~-~~~i~i~GG~~~~~~~~ 248 (329)
|+.....+ .+++=+-.-.+|+.+....... .+...+.++.. ++.+|+........
T Consensus 197 ~~~~~~~g----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~--- 269 (763)
T 3a0f_A 197 YVASHAVG----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGP--- 269 (763)
T ss_dssp EEEESSTT----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSS---
T ss_pred EEEEeCCC----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCC---
Confidence 76543110 3555544567899986321100 22333444332 56788774211000
Q ss_pred cCCCCeeeceeEEEEcCCceeEeecC
Q 020245 249 HLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 249 ~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
.+.....+++.+-...+|+.+..
T Consensus 270 ---~~~~~g~v~rS~D~G~tW~~~~~ 292 (763)
T 3a0f_A 270 ---WGVLYGEVWSYDPTNGNWKHITP 292 (763)
T ss_dssp ---SCCCCEEEEEEETTTTEEEECCT
T ss_pred ---CCCcceeEEEEeCCCCceEECCC
Confidence 00113579999999999999875
No 291
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=53.77 E-value=1e+02 Score=26.04 Aligned_cols=68 Identities=6% Similarity=0.010 Sum_probs=39.5
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
++.+++.|+.+ ..+..||+.+.+-...-... +....-.+++.. ++..++.|+.+ ..+..||..+.+..
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~~~ 249 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENS--PRHGAVSSICIDEECCVLILGTTR----GIIDIWDIRFNVLI 249 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECC--GGGCCEEEEEECTTSCEEEEEETT----SCEEEEETTTTEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccC--CCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcCCccEE
Confidence 46777777754 47899999887643332221 011222222332 56677777755 56888998775543
No 292
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=53.15 E-value=1.5e+02 Score=27.86 Aligned_cols=172 Identities=15% Similarity=0.211 Sum_probs=88.1
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCC---CCCcc-eeEEEE---CCEEEEEccccCCCCCCCceEE
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVP---PPRVG-VTMAAV---GHTIYMFGGRDGTHKELNELYS 103 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p---~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 103 (329)
+.+|+..|..... .....+++=+-...+|+++..+...+ ..|.. ..+++. .+.+|+.+- ...+++
T Consensus 88 ~~~~~~~g~~~~~-~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-------~~~l~~ 159 (763)
T 3a0f_A 88 DRLYLAQGDYVQW-DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR-------TQGLWR 159 (763)
T ss_dssp TCEEEEECSCTTT-CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-------SSCEEE
T ss_pred CEEEEEecccccC-CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC-------CCcEEE
Confidence 5888876632221 12245665555577899987532111 12221 234433 356777531 135665
Q ss_pred EECCCCcEEEcccCCCCCCCcccceeEee----CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCC--------
Q 020245 104 FDTRTNQWTLLSNGDAGPPHRSYHSTAAD----DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENC-------- 171 (329)
Q Consensus 104 ~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~-------- 171 (329)
=+-.-.+|+++...............+.+ .+.+|+...... .+++-+-.-.+|+.+...+...
T Consensus 160 S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~ 234 (763)
T 3a0f_A 160 STDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIV 234 (763)
T ss_dssp ESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHH
T ss_pred ECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC-----eEEEECCCCCCccccCCCcccccccccccc
Confidence 44446789998855211111122222222 346776543211 3454444556899987543110
Q ss_pred ---------CCCCCcEEEEE-CCEEEEEeeeC----CCCcccEEEEeCCCCceEEeec
Q 020245 172 ---------KGRGGPGLIVT-QGKIWVVYGFA----GVEVDDVHCFDPAHAQWAQVET 215 (329)
Q Consensus 172 ---------~~~~~~~~~~~-~~~l~v~gG~~----~~~~~~~~~~d~~~~~w~~~~~ 215 (329)
.+...+.++.. ++.+|+..... +.....+++.+-...+|+.+..
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~ 292 (763)
T 3a0f_A 235 AASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITP 292 (763)
T ss_dssp HHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCT
T ss_pred ccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCC
Confidence 11222333332 57788874211 0123578888888999999863
No 293
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=51.84 E-value=94 Score=25.13 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=51.9
Q ss_pred CCceEEEECCCCcE-EEcccCCCCCCCcccceeEeeCCeEEEEcccCCCc---C-cceeEEEEcCCCeEEEecCCCCCCC
Q 020245 98 LNELYSFDTRTNQW-TLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSG---R-LNDLWGFDVVDRKWIQYPSAGENCK 172 (329)
Q Consensus 98 ~~~~~~~d~~~~~W-~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~---~-~~~~~~~~~~~~~W~~~~~~~~~~~ 172 (329)
...++.+|+.+.+. +.+.. + ........-++ +++.+...... . ...++.+| +.++..+...
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~-----~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----- 216 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P-----RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----- 216 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E-----TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-----
T ss_pred cceEEEEECCCCeEEeeecC-C-----CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-----
Confidence 35789999988876 55543 1 11112222344 55555433221 2 45788888 7777666532
Q ss_pred CCCCcEEEEECCEEEEEeeeCCC----CcccEEEEeCCCCceEEee
Q 020245 173 GRGGPGLIVTQGKIWVVYGFAGV----EVDDVHCFDPAHAQWAQVE 214 (329)
Q Consensus 173 ~~~~~~~~~~~~~l~v~gG~~~~----~~~~~~~~d~~~~~w~~~~ 214 (329)
.......-+++.+++.+.... ....++.+| +.+++.+.
T Consensus 217 --~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 217 --VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp --ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred --cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 111222445654444433221 246789998 55666554
No 294
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=48.39 E-value=1.8e+02 Score=27.26 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=53.6
Q ss_pred CCCceEEEECCCC--cE--EEcccCCCCCCCcccceeE-eeCCeEEEEcccCCCcCcceeEEEEcCC-CeEEE-ecCCCC
Q 020245 97 ELNELYSFDTRTN--QW--TLLSNGDAGPPHRSYHSTA-ADDRHVYIFGGCGVSGRLNDLWGFDVVD-RKWIQ-YPSAGE 169 (329)
Q Consensus 97 ~~~~~~~~d~~~~--~W--~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~-~~W~~-~~~~~~ 169 (329)
...+++.+|..+. .+ +.+.... ....+... ..++.||+....+ ......++.++..+ ..|+. +.+..
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~~l~~~~----~~~~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~- 366 (751)
T 2xe4_A 293 ETAEVHLLDLRKGNAHNTLEIVRPRE----KGVRYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHS- 366 (751)
T ss_dssp SCEEEEEEESSSCTTCCCEEESSCCC----TTCCEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCC-
T ss_pred CCceEEEEECCCCCCCceeEEeecCC----CCceEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCC-
Confidence 3567888998764 45 5554321 01112222 2377888876543 12235788999876 57765 43321
Q ss_pred CCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeC
Q 020245 170 NCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDP 205 (329)
Q Consensus 170 ~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~ 205 (329)
...........++.|++....+ ....++.+++
T Consensus 367 --~~~~l~~~~~~~~~lv~~~~~~--g~~~l~~~dl 398 (751)
T 2xe4_A 367 --EDVFMESIAVRSNYLVVAGRRA--GLTRIWTMMA 398 (751)
T ss_dssp --SSEEEEEEEECSSEEEEEEEET--TEEEEEEEEC
T ss_pred --CCcEEEEEEEECCEEEEEEEeC--CEEEEEEEec
Confidence 1111122334467777665433 2367888886
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=46.45 E-value=1.7e+02 Score=26.68 Aligned_cols=171 Identities=10% Similarity=0.034 Sum_probs=97.3
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEE--ECCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAA--VGHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
+++||+.--. .+.++++++.....+.+...+ +. .-..+++ .+++||+.- .....++++++.
T Consensus 48 ~~~lywtD~~-------~~~I~r~~~~g~~~~~v~~~g-~~---~P~GlAvD~~~~~LY~tD------~~~~~I~v~~~d 110 (628)
T 4a0p_A 48 DNRIYWTDIS-------LKTISRAFMNGSALEHVVEFG-LD---YPEGMAVDWLGKNLYWAD------TGTNRIEVSKLD 110 (628)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCSCEEEECSS-CS---CCCEEEEETTTTEEEEEE------TTTTEEEEEETT
T ss_pred CCEEEEEECC-------CCeEEEEECCCCCcEEEEeCC-CC---CcceEEEEeCCCEEEEEE------CCCCEEEEEecC
Confidence 5789987542 267889998876666554432 11 1123444 368999963 334689999987
Q ss_pred CCcEEEcccCCCCCCCcccceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcE-EEEE--
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPG-LIVT-- 182 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~~~~-- 182 (329)
...-+.+... ....|+ .+++ .++.||+.-- .....++++++....-+.+... ..... +++-
T Consensus 111 G~~~~~l~~~-~l~~P~---~iavdp~~G~lY~tD~----g~~~~I~r~~~dG~~~~~l~~~------~~~P~GlalD~~ 176 (628)
T 4a0p_A 111 GQHRQVLVWK-DLDSPR---ALALDPAEGFMYWTEW----GGKPKIDRAAMDGSERTTLVPN------VGRANGLTIDYA 176 (628)
T ss_dssp STTCEEEECS-SCCCEE---EEEEETTTTEEEEEEC----SSSCEEEEEETTSCSCEEEECS------CSSEEEEEEETT
T ss_pred CCcEEEEEeC-CCCCcc---cEEEccCCCeEEEeCC----CCCCEEEEEeCCCCceEEEECC------CCCcceEEEccc
Confidence 6543333211 112222 3333 3678998731 1136789998876654444322 12222 2222
Q ss_pred CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcC
Q 020245 183 QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGG 240 (329)
Q Consensus 183 ~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG 240 (329)
+++||+.-. ..+.++++|++...-+.+.. .++ ..+++++.++.||+.--
T Consensus 177 ~~~LY~aD~----~~~~I~~~d~dG~~~~v~~~--~l~---~P~glav~~~~ly~tD~ 225 (628)
T 4a0p_A 177 KRRLYWTDL----DTNLIESSNMLGLNREVIAD--DLP---HPFGLTQYQDYIYWTDW 225 (628)
T ss_dssp TTEEEEEET----TTTEEEEEETTSCSCEEEEE--CCS---CEEEEEEETTEEEEEET
T ss_pred cCEEEEEEC----CCCEEEEEcCCCCceEEeec--cCC---CceEEEEECCEEEEecC
Confidence 578998753 33689999986543343332 222 33467777888888753
No 296
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=45.21 E-value=1.4e+02 Score=25.08 Aligned_cols=67 Identities=10% Similarity=0.005 Sum_probs=36.4
Q ss_pred CCEEEEEeeeCCC-----CcccEEEEeCCCCce-EEeeccCCCCCCcceeEEEE-ECCE--EEEEcCccCCCCCCcCCCC
Q 020245 183 QGKIWVVYGFAGV-----EVDDVHCFDPAHAQW-AQVETSGEKPTARSVFSTVG-IGKH--IVVYGGEVDPSDLGHLGAG 253 (329)
Q Consensus 183 ~~~l~v~gG~~~~-----~~~~~~~~d~~~~~w-~~~~~~~~~p~~r~~~~~~~-~~~~--i~i~GG~~~~~~~~~~~~~ 253 (329)
++++|+....... ..+.++.+|.++.+- ..+. .+...+++.. -+++ +|+....
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~------~g~~p~~i~~s~Dg~~~l~v~~~~------------ 339 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS------LGHDVDAISVAQDGGPDLYALSAG------------ 339 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE------CCCCcCeEEECCCCCeEEEEEcCC------------
Confidence 3678886532111 236899999977655 2332 2222333332 2443 4443321
Q ss_pred eeeceeEEEEcCCcee
Q 020245 254 KFAGELYSLDTETLVW 269 (329)
Q Consensus 254 ~~~~~~~~~d~~~~~W 269 (329)
.+.+..+|+++.+=
T Consensus 340 --~~~V~ViD~~t~~v 353 (373)
T 2mad_H 340 --TEVLHIYDAGAGDQ 353 (373)
T ss_pred --CCeEEEEECCCCCE
Confidence 36899999886543
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=44.47 E-value=1.4e+02 Score=24.90 Aligned_cols=238 Identities=14% Similarity=0.175 Sum_probs=112.0
Q ss_pred CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCC---CCCCcceeEEEE-----CCEEEEEccccC-------CC
Q 020245 31 QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDV---PPPRVGVTMAAV-----GHTIYMFGGRDG-------TH 95 (329)
Q Consensus 31 ~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~---p~~r~~~~~~~~-----~~~iyv~GG~~~-------~~ 95 (329)
+++|+.-=+ ...|.++|+..+.-..+.... + -.+....+...+ .++|++.--... ..
T Consensus 25 g~~~vs~l~-------~g~V~~~~~~~~~~~~~~~~~-~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 25 QVFYQSNLY-------KGRIEVYNPKTQSHFNVVIDG-ASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp TEEEEEETT-------TTEEEEECTTTCCEEEECCTT-TCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CEEEEEecc-------CCEEEEEcCCCCeEEEEecCC-ccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 566664422 267999999866544442211 1 012222233344 467888521100 11
Q ss_pred CCCCceEEEECC---CC--cEEEc-ccCCCC-----CCCc--ccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe--
Q 020245 96 KELNELYSFDTR---TN--QWTLL-SNGDAG-----PPHR--SYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK-- 160 (329)
Q Consensus 96 ~~~~~~~~~d~~---~~--~W~~~-~~~~~~-----p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~-- 160 (329)
...+.+.+||+. +. .|..- +..... +... ..-.++--++++||.+-... ..|+++++....
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~ 172 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PAIARVSADGKTVS 172 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CEEEEECTTSCCEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----CeEEEEeCCCCEEe
Confidence 235679999987 43 45421 111000 0011 11122223779999755331 468999887653
Q ss_pred -EEEecCCCCCCCCCCCcEEEEE-CC-EEEEEeeeCCCCcccEEEEeCCCCceEEeecc--CCC-CCCccee-EEEEECC
Q 020245 161 -WIQYPSAGENCKGRGGPGLIVT-QG-KIWVVYGFAGVEVDDVHCFDPAHAQWAQVETS--GEK-PTARSVF-STVGIGK 233 (329)
Q Consensus 161 -W~~~~~~~~~~~~~~~~~~~~~-~~-~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~--~~~-p~~r~~~-~~~~~~~ 233 (329)
|..-.+.. ........++.. ++ .|++..+ . .++++||+.+.....++.. +.. ....... ..+..++
T Consensus 173 ~~~~~~~~~--~~~~G~nGIv~~pdg~~Liv~~~-~----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G 245 (334)
T 2p9w_A 173 TFAWESGNG--GQRPGYSGITFDPHSNKLIAFGG-P----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGN 245 (334)
T ss_dssp EEEECCCCS--SSCCSCSEEEEETTTTEEEEESS-S----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETT
T ss_pred eeeecCCCc--ccccCcceEEEeCCCCEEEEEcC-C----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCC
Confidence 43222211 222333445555 34 4555543 2 6899999874322112211 110 0111111 1223588
Q ss_pred EEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecCCCCCCCCCC---CCCcceeccccc---CCcceEEEEcCC
Q 020245 234 HIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDDGPGSDHHPG---PRGWCAFAGGLR---GGKHGLLVYGGN 307 (329)
Q Consensus 234 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~p~---~r~~~~~~~~~~---~~~~~i~i~GG~ 307 (329)
+++++.-. .+..+.+--... |+.... .+..|. ++. ++.++. +.+++||++-++
T Consensus 246 ~vllV~~~--------------~~~~~~l~S~Dg-W~sa~~---~g~~~~~~~~~g---~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 246 ESVLVGAR--------------APYAISFRSWDN-WKSANI---KKTKRSELQNSG---FTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEEEEE--------------TTEEEEEECSST-TSEEEE---EEEECGGGGSSC---EEEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEcC--------------CCCEEEEECCCC-cceeEE---eeeecCccccCc---eeEEEEeccccCCeEEEEeee
Confidence 88666542 123444444444 877665 222333 233 344433 222669998766
Q ss_pred C
Q 020245 308 S 308 (329)
Q Consensus 308 ~ 308 (329)
-
T Consensus 305 f 305 (334)
T 2p9w_A 305 F 305 (334)
T ss_dssp G
T ss_pred c
Confidence 3
No 298
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=43.56 E-value=1.6e+02 Score=25.32 Aligned_cols=134 Identities=8% Similarity=0.008 Sum_probs=69.0
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCe-EEEEcccCCCcCcceeEEEEcCCCe
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRH-VYIFGGCGVSGRLNDLWGFDVVDRK 160 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~~~~~ 160 (329)
++.||+.- .. ..+.++|+.+++.+.+... ..+-.+.++..+++ ||+...... .....+..++....-
T Consensus 149 ~g~Lyv~d-----~~--~~I~~id~~~~~v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 149 HNHLYLVG-----EQ--HPTRLIDFEKEYVSTVYSG----LSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRESGF 216 (430)
T ss_dssp EEEEEEEE-----BT--EEEEEEETTTTEEEEEECC----CSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGGTS
T ss_pred CCeEEEEe-----CC--CcEEEEECCCCEEEEEecC----CCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCCce
Confidence 36788873 12 7899999999887776542 22333333334444 888754221 112345666654321
Q ss_pred --EEEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-CC-E
Q 020245 161 --WIQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-GK-H 234 (329)
Q Consensus 161 --W~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~~-~ 234 (329)
...+... . .-+.+++. ++.||+.--. ...+++|+++...-..+...+....| ..++.. ++ .
T Consensus 217 ~~~~~l~~~-----~-~p~giavdp~~g~lyv~d~~----~~~V~~~~~~~~~~~~~~~~~~~~~P---~gia~~pdG~~ 283 (430)
T 3tc9_A 217 KVITELTKG-----Q-NCNGAETHPINGELYFNSWN----AGQVFRYDFTTQETTPLFTIQDSGWE---FHIQFHPSGNY 283 (430)
T ss_dssp CSEEEEEEC-----S-SCCCEEECTTTCCEEEEETT----TTEEEEEETTTTEEEEEEECSSSSCC---EEEEECTTSSE
T ss_pred eeeeeeccC-----C-CceEEEEeCCCCEEEEEECC----CCEEEEEECCCCcEEEEEEcCCCCcc---eeEEEcCCCCE
Confidence 1222221 1 11223332 5778886432 26899999987665444322211112 223332 33 5
Q ss_pred EEEEcC
Q 020245 235 IVVYGG 240 (329)
Q Consensus 235 i~i~GG 240 (329)
||+.--
T Consensus 284 lyv~d~ 289 (430)
T 3tc9_A 284 AYIVVV 289 (430)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 888753
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=43.51 E-value=1.5e+02 Score=24.93 Aligned_cols=148 Identities=9% Similarity=0.021 Sum_probs=78.2
Q ss_pred CCCceEEEECCC--CcEEEcccCCC--CCCCcccceeEee---CC--eEEEEcccCCCcCcceeEEEEcCCCeEEEecCC
Q 020245 97 ELNELYSFDTRT--NQWTLLSNGDA--GPPHRSYHSTAAD---DR--HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSA 167 (329)
Q Consensus 97 ~~~~~~~~d~~~--~~W~~~~~~~~--~p~~r~~~~~~~~---~~--~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~ 167 (329)
....+++||+.+ .+-+++...+. .+....-|.+... ++ +|||+--.. ....-.++.+++.+.....+...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~-~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG-SSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST-TCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC-CCCeEEEEEEECCCCEEEEEecc
Confidence 355688999873 44555554331 1112233444432 23 688885432 12234566677776766666555
Q ss_pred CCCCCCCCCcEEEEECCEEEEEeee--CC-----------CCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-C-
Q 020245 168 GENCKGRGGPGLIVTQGKIWVVYGF--AG-----------VEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-G- 232 (329)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~v~gG~--~~-----------~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~- 232 (329)
...+..+.+-..+.-++.+|+-+.. .+ .....+++||+. +.+.+.. .+ ....+++.- +
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~--~l---~~pNGia~spDg 232 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE--GF---DFANGINISPDG 232 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE--EE---SSEEEEEECTTS
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec--CC---cccCcceECCCC
Confidence 4333444444555668888886531 11 134679999984 4444432 11 112233332 3
Q ss_pred CEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCC
Q 020245 233 KHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTET 266 (329)
Q Consensus 233 ~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (329)
..||+.--. ...|++||...
T Consensus 233 ~~lYvadt~--------------~~~I~~~~~~~ 252 (355)
T 3sre_A 233 KYVYIAELL--------------AHKIHVYEKHA 252 (355)
T ss_dssp SEEEEEEGG--------------GTEEEEEEECT
T ss_pred CEEEEEeCC--------------CCeEEEEEECC
Confidence 378876532 35788998864
No 300
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=41.76 E-value=2.2e+02 Score=26.53 Aligned_cols=103 Identities=12% Similarity=0.087 Sum_probs=58.7
Q ss_pred CCCceEEEECCC--CcEEEcccCCCCCCCcccceeEeeCCeEEEEcccC--C---CcCcceeEEEEcCC--------CeE
Q 020245 97 ELNELYSFDTRT--NQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCG--V---SGRLNDLWGFDVVD--------RKW 161 (329)
Q Consensus 97 ~~~~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~--~---~~~~~~~~~~~~~~--------~~W 161 (329)
..+.++..|... ..|.++... +........++++|+....+ . ......+...++.+ ..|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (711)
T 4hvt_A 267 YNYDNYILDTKYKNLKLQKINMP------SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSL 340 (711)
T ss_dssp SCEEEEEEECSSSSCEEEECCSC------TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTC
T ss_pred CceeEEEEcCCCCCCcceEeecC------CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccc
Confidence 346777777653 567777332 22222345688999876432 1 12446788888765 368
Q ss_pred EE-ecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 162 IQ-YPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
+. +.+. ..+.-......++.+++..-.+ ....+.++++.+.+|.
T Consensus 341 ~~~~~~~----~~~~l~~~~~~~~~l~~~~~~~--~~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 341 KILFTPT----ANEVFNFISTTKDRVFLATYDN--VVAKVVTFTLENEQWT 385 (711)
T ss_dssp EEEECCC----TTEEEEEEEECSSCEEEEEEET--TEEEEEEECEETTEEC
T ss_pred eEEECCC----CCCeEEEEEEECCEEEEEEEEC--CEEEEEEEECCCCceE
Confidence 87 3333 1222223345567777654332 3357888988777764
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=41.26 E-value=1.5e+02 Score=24.58 Aligned_cols=142 Identities=15% Similarity=0.161 Sum_probs=70.0
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCc---EEEcccCCCCCCCcc-cceeEee-CC-eEEEEcccCCCcCcceeEEEE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQ---WTLLSNGDAGPPHRS-YHSTAAD-DR-HVYIFGGCGVSGRLNDLWGFD 155 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~p~~r~-~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~ 155 (329)
++.+||.+... ...++++++.... |-.-.+. +..+. .-.++.. ++ .|++..+ . ..+++||
T Consensus 147 ~GnaYVt~s~~-----~~~I~rV~pdG~~~~~~~~~~~~---~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD 212 (334)
T 2p9w_A 147 DGNSYVAFALG-----MPAIARVSADGKTVSTFAWESGN---GGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFD 212 (334)
T ss_dssp TSCEEEEEEES-----SCEEEEECTTSCCEEEEEECCCC---SSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEE
T ss_pred CCCEEEeCCCC-----CCeEEEEeCCCCEEeeeeecCCC---cccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEc
Confidence 46899975433 1569999988653 4322211 12232 2234444 34 5555544 2 5689999
Q ss_pred cCCCeEEEecCC--CCCCCCCCCcE---EEEECCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCC---CcceeE
Q 020245 156 VVDRKWIQYPSA--GENCKGRGGPG---LIVTQGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPT---ARSVFS 227 (329)
Q Consensus 156 ~~~~~W~~~~~~--~~~~~~~~~~~---~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~---~r~~~~ 227 (329)
+.+.....++.. +.. ....... ....++++.++.... +..+.+-.... |+.....+..|. ++....
T Consensus 213 ~~~pv~~~v~~~~~G~~-~~~~~~dgilp~~~~G~vllV~~~~----~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt 286 (334)
T 2p9w_A 213 VSKPYAWPEPVKINGDF-GTLSGTEKIVTVPVGNESVLVGARA----PYAISFRSWDN-WKSANIKKTKRSELQNSGFTA 286 (334)
T ss_dssp CSSSSCCCEECEESSCC-CCCTTEEEEEEEEETTEEEEEEEET----TEEEEEECSST-TSEEEEEEEECGGGGSSCEEE
T ss_pred CCCCcceeecccccCCc-ccccCcccccccccCCEEEEEEcCC----CCEEEEECCCC-cceeEEeeeecCccccCceeE
Confidence 885322012110 100 0111112 223688885554322 23344443334 887665443333 233333
Q ss_pred EEE----ECCEEEEEcCccC
Q 020245 228 TVG----IGKHIVVYGGEVD 243 (329)
Q Consensus 228 ~~~----~~~~i~i~GG~~~ 243 (329)
.+. .+++||++.+...
T Consensus 287 ~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 287 VADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp EEEEEETTEEEEEEEECCGG
T ss_pred EEEeccccCCeEEEEeeecC
Confidence 333 4679999987654
No 302
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=40.90 E-value=2.1e+02 Score=26.12 Aligned_cols=78 Identities=10% Similarity=0.025 Sum_probs=39.1
Q ss_pred CCeEEEEcccCCCcCcceeEEEE----cCCCeEEEecC---CCCCCCCCCC-----cEEEEECCE-EEEEeeeCCCCccc
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFD----VVDRKWIQYPS---AGENCKGRGG-----PGLIVTQGK-IWVVYGFAGVEVDD 199 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~----~~~~~W~~~~~---~~~~~~~~~~-----~~~~~~~~~-l~v~gG~~~~~~~~ 199 (329)
++++++... ........++.+| ..+.++..+.. .. ...... .....-+++ +++.... ......
T Consensus 263 D~~~~~~~~-~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~g~~~ 338 (719)
T 1z68_A 263 DERVCLQWL-KRVQNVSVLSICDFREDWQTWDCPKTQEHIEES--RTGWAGGFFVSTPVFSYDAISYYKIFSD-KDGYKH 338 (719)
T ss_dssp SSEEEEEEE-ESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC--SSSCSSSSSCCCCEECTTSSCEEEEEEC-TTSCEE
T ss_pred CCeEEEEEe-ccccCeEEEEEEcccCCCCCCceEEEEeccccc--CCceEccccCCccEECCCCCeEEEEEEc-cCCceE
Confidence 566655522 2222335788899 77766555442 11 011111 122233454 4443221 122467
Q ss_pred EEEEeCCCCceEEee
Q 020245 200 VHCFDPAHAQWAQVE 214 (329)
Q Consensus 200 ~~~~d~~~~~w~~~~ 214 (329)
++.+|..+.+.+.+.
T Consensus 339 l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 339 IHYIKDTVENAIQIT 353 (719)
T ss_dssp EEEESSCSTTCEECS
T ss_pred EEEEECCCCceEecc
Confidence 999998887766654
No 303
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=39.80 E-value=2.4e+02 Score=26.33 Aligned_cols=228 Identities=16% Similarity=0.225 Sum_probs=0.0
Q ss_pred ceeEEeccCCCCCCCC----cceeEEEEC----CEEEEEcCccCCCCcc-CCceEEEeCCCCcEEEEeeCCC----CCCC
Q 020245 6 GTWIKLDQKGSGPGAR----SSHAITIVG----QKVYAFGGEFTPRVPV-DNNLHVFDLETLTWSVADVTGD----VPPP 72 (329)
Q Consensus 6 ~~W~~~~~~~~~p~~r----~~~~~~~~~----~~l~~~GG~~~~~~~~-~~~~~~~d~~~~~W~~~~~~~~----~p~~ 72 (329)
.+|+++.. .+..+ .....++++ +.||+..|........ ...+++=+-...+|+.+..... .|..
T Consensus 55 ~tW~~i~~---~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~ 131 (737)
T 2cn3_A 55 ETWIPLLD---HFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGR 131 (737)
T ss_dssp TEEEECCT---TCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTT
T ss_pred CCEEECcC---ccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcc
Q ss_pred CcceeEEEE---CCEEEEEc--cccCCCCCCCceEEEECCCCcEEEcccCCCCCCC--------------cccceeEeeC
Q 020245 73 RVGVTMAAV---GHTIYMFG--GRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPH--------------RSYHSTAADD 133 (329)
Q Consensus 73 r~~~~~~~~---~~~iyv~G--G~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~--------------r~~~~~~~~~ 133 (329)
...+.++.. .+.||+.. |.. +++=+-...+|+++..+ |.. ..+...+.++
T Consensus 132 ~~~~~l~~~p~~~~~v~~g~~~g~g--------l~~S~DgG~tW~~~~~~---~~~~~~~~~p~~~~~~~~~g~~~v~~d 200 (737)
T 2cn3_A 132 SMGERLAIDPNDNRILYLGTRCGNG--------LWRSTDYGVTWSKVESF---PNPGTYIYDPNFDYTKDIIGVVWVVFD 200 (737)
T ss_dssp TSCCCEEECSSCTTCEEEECSTTCC--------EEEESSTTSSCEECTTC---CCCCCCBSCTTSTTTCSBCCEEEEEEC
T ss_pred cccceEEECCCCCCEEEEeeccCCc--------EEEeCCCCcceecccCC---CCCcccccCcccccccCCCCEEEEEcC
Q ss_pred C----------eEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeC-----CCCc
Q 020245 134 R----------HVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFA-----GVEV 197 (329)
Q Consensus 134 ~----------~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~-----~~~~ 197 (329)
. .||+.-.... ..+++-.-.-.+|+.+..+ |.....+.++.. ++.+|+..+.. +...
T Consensus 201 p~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~tW~~~~~~---p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~ 273 (737)
T 2cn3_A 201 KSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGVTWKAVPGQ---PKGLLPHHGVLASNGMLYITYGDTCGPYDGNGK 273 (737)
T ss_dssp GGGSCTTSCCSCEEEEESCSS----CCEEEESSTTSCCEECTTC---CCSSEEEEEEECTTSEEEEEEESSCCSSCCSCC
T ss_pred CCCcccCCCCCEEEEEecCCC----ccEEEEcCCCCceEECCCC---CCcccceEEEECCCCeEEEEecCCCCccccccC
Q ss_pred ccEEEEeCCCCceEEeeccCCCCCC----cceeEEEEE----CCEEEEEcCccCCCCCCcCCCCeee-----ceeEEEEc
Q 020245 198 DDVHCFDPAHAQWAQVETSGEKPTA----RSVFSTVGI----GKHIVVYGGEVDPSDLGHLGAGKFA-----GELYSLDT 264 (329)
Q Consensus 198 ~~~~~~d~~~~~w~~~~~~~~~p~~----r~~~~~~~~----~~~i~i~GG~~~~~~~~~~~~~~~~-----~~~~~~d~ 264 (329)
..+++.+....+|+.+. ..|.. +++++.+.+ .+.||+.+. . ..+++-.-
T Consensus 274 g~v~~s~d~G~tW~~i~---~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~---------------~~~~~~~~l~~S~D 335 (737)
T 2cn3_A 274 GQVWKFNTRTGEWIDIT---PIPYSSSDNRFCFAGLAVDRQNPDIIMVTSM---------------NAWWPDEYIFRSTD 335 (737)
T ss_dssp EEEEEEETTTCCEEECC---SSCTTSTTCCSEEEEEEECTTCTTCEEEEEE---------------CCCSSCCCEEEESS
T ss_pred ceEEEEeCCCCCEEEcc---CCCCCCcccccccccEEEcCCCCCEEEEEec---------------ccCCCCccEEEeCC
Q ss_pred CCceeEee
Q 020245 265 ETLVWTRW 272 (329)
Q Consensus 265 ~~~~W~~~ 272 (329)
...+|+.+
T Consensus 336 gG~tW~~~ 343 (737)
T 2cn3_A 336 GGATWKNI 343 (737)
T ss_dssp TTSSCEES
T ss_pred CCccccch
No 304
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=39.11 E-value=2.5e+02 Score=26.45 Aligned_cols=246 Identities=13% Similarity=0.191 Sum_probs=119.2
Q ss_pred ceeEEeccCCCCC--CCCcceeEEEEC---CEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCC---CCC-cce
Q 020245 6 GTWIKLDQKGSGP--GARSSHAITIVG---QKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVP---PPR-VGV 76 (329)
Q Consensus 6 ~~W~~~~~~~~~p--~~r~~~~~~~~~---~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p---~~r-~~~ 76 (329)
.+|+++....... ..+..++++... +.+|+..|.... ... ..+++=+-...+|+.+......+ ..| ..+
T Consensus 47 ~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~-~~~-~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~ 124 (789)
T 1sqj_A 47 SKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG-DEW-AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGE 124 (789)
T ss_dssp TEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT-SSC-CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCC
T ss_pred CCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC-Ccc-cEEEEECCCCCcceeccCCcccCccCCCcccee
Confidence 4799876421000 123345555442 478887664221 111 45666666678899986532111 122 223
Q ss_pred eEEEE---CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEee----CCeEEEEcccCCCcCcc
Q 020245 77 TMAAV---GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAAD----DRHVYIFGGCGVSGRLN 149 (329)
Q Consensus 77 ~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~ 149 (329)
.+++. .+.+|+. .. ...+++=+-.-.+|+++...+.....-.....+.+ .+.+|+..... .
T Consensus 125 ~iav~p~~~~~v~~g-~~------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~ 192 (789)
T 1sqj_A 125 RLAVNPFNSNEVWMG-TR------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-----Q 192 (789)
T ss_dssp CEEEETTEEEEEEEE-CS------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-----T
T ss_pred EEEEcCCCCCEEEEE-ec------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-----C
Confidence 34443 2456663 21 13466544456789998764211011112222222 24676654321 2
Q ss_pred eeEEEEcCCCeEEEecCCCCCC-------------CCCCCcEEEEE--CCEEEEEeeeCC----CCcccEEEEeCCCCce
Q 020245 150 DLWGFDVVDRKWIQYPSAGENC-------------KGRGGPGLIVT--QGKIWVVYGFAG----VEVDDVHCFDPAHAQW 210 (329)
Q Consensus 150 ~~~~~~~~~~~W~~~~~~~~~~-------------~~~~~~~~~~~--~~~l~v~gG~~~----~~~~~~~~~d~~~~~w 210 (329)
.+++=.-.-.+|+.+...+... .....+.+++. .+.+|+..+... .....+++.+-...+|
T Consensus 193 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW 272 (789)
T 1sqj_A 193 GMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAW 272 (789)
T ss_dssp CEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCE
T ss_pred eEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCce
Confidence 3444434456899988442100 00011444432 788888743211 1336788888888999
Q ss_pred EEeeccCC--CCCC----cc---eeEEEEE----CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeec
Q 020245 211 AQVETSGE--KPTA----RS---VFSTVGI----GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWD 273 (329)
Q Consensus 211 ~~~~~~~~--~p~~----r~---~~~~~~~----~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 273 (329)
+.+..... .|.+ .. +...+.+ .+.||+.+...... .....+++-+-...+|+.+.
T Consensus 273 ~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~--------~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 273 DDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPG--------PALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp EECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSC--------SSCCCEEEESSTTSSEEEHH
T ss_pred EECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCC--------cccccEEEecCCCCCceeCc
Confidence 99874211 0111 12 3333333 23566665421100 00134666666677898886
No 305
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=38.86 E-value=2.2e+02 Score=25.67 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=42.9
Q ss_pred eEEEECCEEEEEcCccCCCCccCCceEEEeCCCCc--EEEEeeCCCCCCCCcceeEEEECC------EEEEEccccCCCC
Q 020245 25 AITIVGQKVYAFGGEFTPRVPVDNNLHVFDLETLT--WSVADVTGDVPPPRVGVTMAAVGH------TIYMFGGRDGTHK 96 (329)
Q Consensus 25 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~------~iyv~GG~~~~~~ 96 (329)
+.++.+++||+... ...++.+|..+.+ |+.-.... ........+-++.++ .||+ |.......
T Consensus 112 g~a~~~~~v~~~t~--------dg~l~AlD~~TG~~~W~~~~~~~-~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~ 181 (582)
T 1flg_A 112 GAAIYGDKVFFGTL--------DASVVALNKNTGKVVWKKKFADH-GAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFG 181 (582)
T ss_dssp CCEEETTEEEEEET--------TTEEEEEESSSCCEEEEEECSCG-GGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGC
T ss_pred ccEEECCEEEEEeC--------CCEEEEEECCCCCEEeeecCCCC-CcCcccccCCEEeCCCcCCcEEEEE-eccccccC
Confidence 44567889988542 2679999998765 76432210 000011223334555 6655 32211112
Q ss_pred CCCceEEEECCCC--cEEE
Q 020245 97 ELNELYSFDTRTN--QWTL 113 (329)
Q Consensus 97 ~~~~~~~~d~~~~--~W~~ 113 (329)
....++.||..+. .|+.
T Consensus 182 ~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 182 VVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp CBCEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEECCCCCEEeec
Confidence 3457999999876 4864
No 306
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=38.53 E-value=1.9e+02 Score=24.84 Aligned_cols=145 Identities=11% Similarity=0.127 Sum_probs=73.1
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCe-E
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRK-W 161 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~-W 161 (329)
+.||+.- .. ..+.++|+.+++.+.+... ..+-...++..++.||+.--... .....+..++..... .
T Consensus 153 g~Lyv~D-----~~--~~I~~id~~~g~v~~~~~~----~~~P~giavd~dG~lyVad~~~~-~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 153 DDLYWVG-----QR--DAFRHVDFVNQYVDIKTTN----IGQCADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CEEEEEC-----BT--SCEEEEETTTTEEEEECCC----CSCEEEEEECTTCCEEEEECCSC-TTSEEEEEECGGGTTCC
T ss_pred CEEEEEe-----CC--CCEEEEECCCCEEEEeecC----CCCccEEEECCCCCEEEEcCCCC-cccceEEEEECCCCeec
Confidence 7899872 22 7899999988887766442 22233333344667888753211 111234455443221 1
Q ss_pred -EEecCCCCCCCCCCCcEEEEE-CCEEEEEeeeCCCCcccEEEEeCCCCce-EEeeccCCCCCCcceeEEEEE--CCEEE
Q 020245 162 -IQYPSAGENCKGRGGPGLIVT-QGKIWVVYGFAGVEVDDVHCFDPAHAQW-AQVETSGEKPTARSVFSTVGI--GKHIV 236 (329)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~-~~~l~v~gG~~~~~~~~~~~~d~~~~~w-~~~~~~~~~p~~r~~~~~~~~--~~~i~ 236 (329)
..+... ......++.- ++.||+.-. ....+++||+++.+. +.+...+. .+.. ..++.. ++.||
T Consensus 221 ~~~~~~~-----~~P~giavd~~~G~lyv~d~----~~~~V~~~d~~~g~~~~~~~~~~~--~~~~-~~ia~dpdG~~LY 288 (433)
T 4hw6_A 221 RLSLCNA-----RGAKTCAVHPQNGKIYYTRY----HHAMISSYDPATGTLTEEEVMMDT--KGSN-FHIVWHPTGDWAY 288 (433)
T ss_dssp EEEEEEC-----SSBCCCEECTTTCCEEECBT----TCSEEEEECTTTCCEEEEEEECSC--CSSC-EEEEECTTSSEEE
T ss_pred ccccccc-----CCCCEEEEeCCCCeEEEEEC----CCCEEEEEECCCCeEEEEEeccCC--CCCc-ccEEEeCCCCEEE
Confidence 112111 1111112222 577887642 225899999986665 34433222 1211 223322 33688
Q ss_pred EEcCccCCCCCCcCCCCeeeceeEEEEcC
Q 020245 237 VYGGEVDPSDLGHLGAGKFAGELYSLDTE 265 (329)
Q Consensus 237 i~GG~~~~~~~~~~~~~~~~~~~~~~d~~ 265 (329)
+.--. .+.|+++|..
T Consensus 289 vad~~--------------~~~I~~~~~d 303 (433)
T 4hw6_A 289 IIYNG--------------KHCIYRVDYN 303 (433)
T ss_dssp EEETT--------------TTEEEEEEBC
T ss_pred EEeCC--------------CCEEEEEeCC
Confidence 87532 2468887754
No 307
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=38.43 E-value=2.6e+02 Score=26.37 Aligned_cols=241 Identities=13% Similarity=0.157 Sum_probs=116.6
Q ss_pred cceeEEeccCCCCCCCCcceeEEEE---CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCC--CCCcceeEE
Q 020245 5 KGTWIKLDQKGSGPGARSSHAITIV---GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVP--PPRVGVTMA 79 (329)
Q Consensus 5 ~~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p--~~r~~~~~~ 79 (329)
..+|+.+... . ...-.+++.. .+.+|+ |+.. ..+++-+-...+|+.+....... ..+..++++
T Consensus 3 ~~~W~~~~~~---~-~g~i~~i~~~p~~~~~~~a-~~~~-------ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia 70 (789)
T 1sqj_A 3 HYEFKNVAIG---G-GGYITGIVAHPKTKDLLYA-RTDI-------GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIA 70 (789)
T ss_dssp -CEEEECCCC---B-CSCEEEEEECSSSTTCEEE-EESS-------SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEE
T ss_pred cccceEccCC---C-CCcEEEEEECCCCCCEEEE-EecC-------CCEEEecCCCCCeeECccCCCcccccCCceeEEE
Confidence 3579988652 1 2233333332 245665 3311 45888887788999865421000 112233444
Q ss_pred EEC---CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCC---CCc-ccceeEee---CCeEEEEcccCCCcCcc
Q 020245 80 AVG---HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGP---PHR-SYHSTAAD---DRHVYIFGGCGVSGRLN 149 (329)
Q Consensus 80 ~~~---~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p---~~r-~~~~~~~~---~~~i~v~GG~~~~~~~~ 149 (329)
+.. +.+|+..|.. .......+++=+-.-.+|+++......+ ..| ..+.++.. .+.+|+ |... .
T Consensus 71 ~dp~~~~~i~~~~g~~-~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~~-----~ 143 (789)
T 1sqj_A 71 LDPNNPDRLYLAQGRY-VGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTRT-----E 143 (789)
T ss_dssp EETTEEEEEEEEECSC-TTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECSS-----S
T ss_pred ECCCCCCEEEEEeCcc-CCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEE-Eecc-----C
Confidence 432 4688876532 1011145555555567899986431100 112 12233333 345665 3321 3
Q ss_pred eeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE----CCEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCC-------
Q 020245 150 DLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT----QGKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGE------- 218 (329)
Q Consensus 150 ~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~------- 218 (329)
.+++-+-.-.+|+++...+.....-.....+.+ .+.+|+..... ..+++=.-.-.+|+.+.....
T Consensus 144 gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~----~~v~~S~DgG~TW~~~~~~~~~~~~~~~ 219 (789)
T 1sqj_A 144 GIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP----QGMYVTHDGGVSWEPVAGQPSSWLNRTT 219 (789)
T ss_dssp CEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST----TCEEEESSTTSSCEECTTCCCSCCHHHH
T ss_pred CEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC----CeEEEEcCCCcCcccCCCCcCccccccc
Confidence 455555555789999865321011122223332 24566643211 244444444568998862110
Q ss_pred --CC----CCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEeecC
Q 020245 219 --KP----TARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRWDD 274 (329)
Q Consensus 219 --~p----~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 274 (329)
+| .....|.+++. ++.||+..+.... . . ......+++.+-...+|+.+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~-p--~---~g~~g~l~~S~DgG~tW~~~~~ 277 (789)
T 1sqj_A 220 GAFPDKKPASIAPQPMKVALTPNFLYVTYADYPG-P--W---GVTFGEVWRQNRTSGAWDDITP 277 (789)
T ss_dssp HTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCS-S--S---CCCCCCEEEEETTTCCEEECCC
T ss_pred cccCcccccccccceeEEcCCCCeEEEEEecCCC-C--C---CCCCceEEEEeCCCCceEECcC
Confidence 11 01111444333 6788887421100 0 0 0113568999999999999875
No 308
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=37.32 E-value=1.7e+02 Score=24.87 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=45.4
Q ss_pred CCEEEEEcc---ccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCC--eEEEEcccCCCcCcceeEEEEc
Q 020245 82 GHTIYMFGG---RDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDR--HVYIFGGCGVSGRLNDLWGFDV 156 (329)
Q Consensus 82 ~~~iyv~GG---~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~--~i~v~GG~~~~~~~~~~~~~~~ 156 (329)
++++|+.-+ ........+.++.+|..+.+-..--+.+ .+.....+.-++ .+|+.-+. .+++.++|.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg----~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~ 361 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG----HEIDSINVSQDEKPLLYALSTG-----DKTLYIHDA 361 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECSSSSCEEEEEETT-----TTEEEEEET
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC----CCcceEEECCCCCeEEEEEcCC-----CCeEEEEEC
Confidence 578999743 2212334678999999998755433332 122233333454 46665332 267999999
Q ss_pred CCCeEEEecCC
Q 020245 157 VDRKWIQYPSA 167 (329)
Q Consensus 157 ~~~~W~~~~~~ 167 (329)
.+.+-...-..
T Consensus 362 ~t~k~~~~i~~ 372 (386)
T 3sjl_D 362 ESGEELRSVNQ 372 (386)
T ss_dssp TTCCEEEEECC
T ss_pred CCCcEEEEecC
Confidence 99875544443
No 309
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=35.10 E-value=2.2e+02 Score=24.55 Aligned_cols=68 Identities=9% Similarity=-0.022 Sum_probs=38.9
Q ss_pred CCEEEEEeeeCCC-----CcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEE-C-C-EEEEEcCccCCCCCCcCCCCe
Q 020245 183 QGKIWVVYGFAGV-----EVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGI-G-K-HIVVYGGEVDPSDLGHLGAGK 254 (329)
Q Consensus 183 ~~~l~v~gG~~~~-----~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~-~-~-~i~i~GG~~~~~~~~~~~~~~ 254 (329)
++++||.-...+. ..+.+..+|..+.+-..-- |.+...+++..- + . .+|+.-..
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I-----~vg~~P~gia~spDg~~~lyv~n~~------------- 391 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKI-----ELGHEIDSINVSQDAEPLLYALSAG------------- 391 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE-----EEEEEECEEEECCSSSCEEEEEETT-------------
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEE-----ECCCCcCeEEEccCCCEEEEEEcCC-------------
Confidence 4778887532111 2468999999776544322 233333344333 3 3 56666532
Q ss_pred eeceeEEEEcCCcee
Q 020245 255 FAGELYSLDTETLVW 269 (329)
Q Consensus 255 ~~~~~~~~d~~~~~W 269 (329)
.+.|.++|+.+.+-
T Consensus 392 -s~~VsVID~~t~kv 405 (426)
T 3c75_H 392 -TQTLHIYDAATGEE 405 (426)
T ss_dssp -TTEEEEEETTTCCE
T ss_pred -CCeEEEEECCCCCE
Confidence 36899999876643
No 310
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=34.71 E-value=2.1e+02 Score=24.23 Aligned_cols=17 Identities=29% Similarity=0.731 Sum_probs=12.1
Q ss_pred cceeEEEE-CCEEEEEcC
Q 020245 22 SSHAITIV-GQKVYAFGG 38 (329)
Q Consensus 22 ~~~~~~~~-~~~l~~~GG 38 (329)
..|++++. +++||.+|-
T Consensus 25 ~~hs~al~~~g~v~~wG~ 42 (406)
T 4d9s_A 25 ASHSVALLSGDIVCSWGR 42 (406)
T ss_dssp SSEEEEEETTTEEEEEEC
T ss_pred CCeEEEEEeCCEEEEEeC
Confidence 35666665 679999984
No 311
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=33.05 E-value=2e+02 Score=23.42 Aligned_cols=188 Identities=11% Similarity=0.045 Sum_probs=100.1
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcE-EEEeeCCCCCCCCcceeEEE--ECCEEEEEccccCCCCCCCceEEEEC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTW-SVADVTGDVPPPRVGVTMAA--VGHTIYMFGGRDGTHKELNELYSFDT 106 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~ 106 (329)
+++||+.--. .+.++++++....- ..+.... +.. -..+++ .++.||+.- .....++++++
T Consensus 46 ~~~lyw~D~~-------~~~I~r~~~~g~~~~~~~~~~~-l~~---p~glavd~~~g~ly~~d------~~~~~I~~~~~ 108 (318)
T 3sov_A 46 HGLIYWSDVS-------EEAIKRTEFNKTESVQNVVVSG-LLS---PDGLACDWLGEKLYWTD------SETNRIEVSNL 108 (318)
T ss_dssp GTEEEEEETT-------TTEEEEEETTSSSCCCEEEEEC-CSC---CCEEEEETTTTEEEEEE------TTTTEEEEEET
T ss_pred CCEEEEEECC-------CCcEEEEEccCCCceEEEEcCC-CCC---ccEEEEEcCCCeEEEEE------CCCCEEEEEEC
Confidence 4688887432 25788888876521 1111111 111 123343 367899863 23467899998
Q ss_pred CCCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEE--C
Q 020245 107 RTNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVT--Q 183 (329)
Q Consensus 107 ~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~--~ 183 (329)
....-+.+.... ...|+ ..++. .++.||+.-- .....++++++....-+.+.... -..-..+++. +
T Consensus 109 dG~~~~~l~~~~-~~~P~--giavdp~~g~ly~td~----~~~~~I~r~~~dG~~~~~~~~~~----l~~Pnglavd~~~ 177 (318)
T 3sov_A 109 DGSLRKVLFWQE-LDQPR--AIALDPSSGFMYWTDW----GEVPKIERAGMDGSSRFIIINSE----IYWPNGLTLDYEE 177 (318)
T ss_dssp TSCSCEEEECSS-CSSEE--EEEEEGGGTEEEEEEC----SSSCEEEEEETTSCSCEEEECSS----CSCEEEEEEETTT
T ss_pred CCCcEEEEEeCC-CCCcc--EEEEeCCCCEEEEEec----CCCCEEEEEEcCCCCeEEEEECC----CCCccEEEEeccC
Confidence 765433332211 11122 22222 3678888641 11367899988754333332211 1112233333 6
Q ss_pred CEEEEEeeeCCCCcccEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCEEEEEcCccCCCCCCcCCCCeeeceeEEEE
Q 020245 184 GKIWVVYGFAGVEVDDVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKHIVVYGGEVDPSDLGHLGAGKFAGELYSLD 263 (329)
Q Consensus 184 ~~l~v~gG~~~~~~~~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d 263 (329)
+.||+.-. ....|+++|.+...-+.+.. .. .....++++.++.+|+.--. ...|.++|
T Consensus 178 ~~lY~aD~----~~~~I~~~d~dG~~~~~~~~-~~---~~~P~glav~~~~lywtd~~--------------~~~V~~~~ 235 (318)
T 3sov_A 178 QKLYWADA----KLNFIHKSNLDGTNRQAVVK-GS---LPHPFALTLFEDILYWTDWS--------------THSILACN 235 (318)
T ss_dssp TEEEEEET----TTTEEEEEETTSCSCEEEEC-SC---CSCEEEEEEETTEEEEEETT--------------TTEEEEEE
T ss_pred CEEEEEEC----CCCEEEEEcCCCCceEEEec-CC---CCCceEEEEeCCEEEEEecC--------------CCeEEEEE
Confidence 78998743 34789999987554444442 11 22335666778899987431 34788888
Q ss_pred cCCc
Q 020245 264 TETL 267 (329)
Q Consensus 264 ~~~~ 267 (329)
..+.
T Consensus 236 ~~~G 239 (318)
T 3sov_A 236 KYTG 239 (318)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7544
No 312
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=32.25 E-value=2.9e+02 Score=25.12 Aligned_cols=83 Identities=11% Similarity=0.088 Sum_probs=49.2
Q ss_pred CCCCCcceeEEEE------CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEe----eCCeEEE
Q 020245 69 VPPPRVGVTMAAV------GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAA----DDRHVYI 138 (329)
Q Consensus 69 ~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~----~~~~i~v 138 (329)
.+..-.+|...+. +..+||- ......+.+.|+.+.+-.++-.. |....-|.+.. -.+++|+
T Consensus 82 ~~~gd~hh~~~s~t~g~~DG~~lfVn------d~~~~rVavIdl~t~~~~~ii~i---p~g~~phg~~~~~~p~~~~v~~ 152 (595)
T 1fwx_A 82 HDNGDLHHVHMSFTEGKYDGRFLFMN------DKANTRVARVRCDVMKCDAILEI---PNAKGIHGLRPQKWPRSNYVFC 152 (595)
T ss_dssp CCCCCBCCEEEEEETTEEEEEEEEEE------ETTTTEEEEEETTTTEEEEEEEC---SSCCSEEEEEECCSSBCSEEEE
T ss_pred cccCCCCccccCCCCCCcCCCEEEEE------cCCCCEEEEEECCCceEeeEEeC---CCCCCCcceeeeecCCCcEEEE
Confidence 3344555655554 4468883 45567899999999876554444 33334455443 3456766
Q ss_pred EcccCC------------CcCcceeEEEEcCCCe
Q 020245 139 FGGCGV------------SGRLNDLWGFDVVDRK 160 (329)
Q Consensus 139 ~GG~~~------------~~~~~~~~~~~~~~~~ 160 (329)
.+-... +.+.+.+-..|..+.+
T Consensus 153 ~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 153 NGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 186 (595)
T ss_dssp EECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE
T ss_pred ecccccccCCCCcccccccccCceEEEEECCCCe
Confidence 642211 2244678888998875
No 313
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=31.88 E-value=2.4e+02 Score=24.10 Aligned_cols=107 Identities=10% Similarity=0.075 Sum_probs=58.9
Q ss_pred CCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE--ECCE-EEEEeeeCCCCcccEEEEeCCCCc
Q 020245 133 DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV--TQGK-IWVVYGFAGVEVDDVHCFDPAHAQ 209 (329)
Q Consensus 133 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~-l~v~gG~~~~~~~~~~~~d~~~~~ 209 (329)
++.||+.--. ..+.++|+.+++.+.+... . .....+. .+++ ||+.....+.....++.++.. ..
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~----~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYSG----L--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEECC----C--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEecC----C--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 4688887331 6799999999888777542 1 1222222 2344 888764332222345556653 23
Q ss_pred eE---EeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCceeEee
Q 020245 210 WA---QVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETLVWTRW 272 (329)
Q Consensus 210 w~---~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 272 (329)
+. .+. .. ...+++++. ++.||+..-. ...|++||++...-..+
T Consensus 216 ~~~~~~l~---~~---~~p~giavdp~~g~lyv~d~~--------------~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 216 FKVITELT---KG---QNCNGAETHPINGELYFNSWN--------------AGQVFRYDFTTQETTPL 263 (430)
T ss_dssp SCSEEEEE---EC---SSCCCEEECTTTCCEEEEETT--------------TTEEEEEETTTTEEEEE
T ss_pred eeeeeeec---cC---CCceEEEEeCCCCEEEEEECC--------------CCEEEEEECCCCcEEEE
Confidence 32 222 11 122333333 5688887532 24799999987765333
No 314
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=30.35 E-value=2.5e+02 Score=23.81 Aligned_cols=123 Identities=12% Similarity=-0.020 Sum_probs=63.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccC---CCCCCCceEEE
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDG---THKELNELYSF 104 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~---~~~~~~~~~~~ 104 (329)
.+++|+.-.... ...+.+.++|+.+.+-......+.. + + ++.. +..+|+...... .....+.+..+
T Consensus 44 ~~~vyV~~~~~~---~~~~~V~ViD~~t~~v~~~I~vG~~--P---~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 44 ARRVYVNDPAHF---AAVTQQFVIDGEAGRVIGMIDGGFL--P---N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp TTEEEEEECGGG---CSSEEEEEEETTTTEEEEEEEECSS--C---E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEcCccc---CCCCEEEEEECCCCeEEEEEECCCC--C---c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 568888754311 1126899999998775332222211 2 4 3332 346888753210 00123569999
Q ss_pred ECCCCcEE-EcccCC--CCCCC-cccceeEee-CCeEEEEcccCCCcCcceeEEEEcCCCeEEEec
Q 020245 105 DTRTNQWT-LLSNGD--AGPPH-RSYHSTAAD-DRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYP 165 (329)
Q Consensus 105 d~~~~~W~-~~~~~~--~~p~~-r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~ 165 (329)
|+.+.+-. .++... ..... +-....+.- +.++|+..... .+.+.++|..+.+-...-
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~----~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP----APAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS----SCEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC----CCeEEEEECCCCcEEEEE
Confidence 99988643 232211 00001 122222222 44677763211 267899999998754433
No 315
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=30.02 E-value=2.2e+02 Score=23.10 Aligned_cols=149 Identities=12% Similarity=0.082 Sum_probs=80.7
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTR 107 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~ 107 (329)
++.||+.-.. .+.+.++++....-+.+.... +..| ..+++. ++.||+.- ......++++++.
T Consensus 90 ~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~-~~~P---~giavdp~~g~ly~td-----~~~~~~I~r~~~d 153 (318)
T 3sov_A 90 GEKLYWTDSE-------TNRIEVSNLDGSLRKVLFWQE-LDQP---RAIALDPSSGFMYWTD-----WGEVPKIERAGMD 153 (318)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCSCEEEECSS-CSSE---EEEEEEGGGTEEEEEE-----CSSSCEEEEEETT
T ss_pred CCeEEEEECC-------CCEEEEEECCCCcEEEEEeCC-CCCc---cEEEEeCCCCEEEEEe-----cCCCCEEEEEEcC
Confidence 5678876432 257888888754434333211 2122 233333 57888863 1224679999987
Q ss_pred CCcEEEcccCCCCCCCcccceeEe-eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEEECCEE
Q 020245 108 TNQWTLLSNGDAGPPHRSYHSTAA-DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIVTQGKI 186 (329)
Q Consensus 108 ~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 186 (329)
...-+.+...+ .......++. .+++||+.- .....|+++|+....-+.+... ....-..+++.++.+
T Consensus 154 G~~~~~~~~~~---l~~Pnglavd~~~~~lY~aD-----~~~~~I~~~d~dG~~~~~~~~~----~~~~P~glav~~~~l 221 (318)
T 3sov_A 154 GSSRFIIINSE---IYWPNGLTLDYEEQKLYWAD-----AKLNFIHKSNLDGTNRQAVVKG----SLPHPFALTLFEDIL 221 (318)
T ss_dssp SCSCEEEECSS---CSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEECS----CCSCEEEEEEETTEE
T ss_pred CCCeEEEEECC---CCCccEEEEeccCCEEEEEE-----CCCCEEEEEcCCCCceEEEecC----CCCCceEEEEeCCEE
Confidence 54333332211 1122222222 378999973 2346899999875443333321 112224455678889
Q ss_pred EEEeeeCCCCcccEEEEeCCCCce
Q 020245 187 WVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 187 ~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
|+.-- ....+.++++.+.+-
T Consensus 222 ywtd~----~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 222 YWTDW----STHSILACNKYTGEG 241 (318)
T ss_dssp EEEET----TTTEEEEEETTTCCS
T ss_pred EEEec----CCCeEEEEECCCCCc
Confidence 88742 236899999865543
No 316
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=28.28 E-value=2.4e+02 Score=22.86 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=44.7
Q ss_pred EEECCEEEEEccccCCC-CCCCceEEEEC-CCCcEEEcccCCCCCCCcccceeEeeCCeEEEEccc
Q 020245 79 AAVGHTIYMFGGRDGTH-KELNELYSFDT-RTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGC 142 (329)
Q Consensus 79 ~~~~~~iyv~GG~~~~~-~~~~~~~~~d~-~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 142 (329)
...+++.+|+|-....+ ...+.|..|.- ....|+.++.+ -........+.+++.+ ++||.
T Consensus 37 F~~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v~~~---~~~LqDPF~t~I~gEl-i~GGv 98 (315)
T 2b4w_A 37 FSYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPEL---SWELEDPYIAKINNEM-IFGGT 98 (315)
T ss_dssp EEETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTTC---CBSCEEEEEEEETTEE-EEEEE
T ss_pred eeECCEEEEEeeeecCCCccccEEEEEEEcCCCceEECCCC---EEEecCccEEEECCEE-EeeeE
Confidence 45788999999887544 35578888876 78899988873 4556777778889988 66773
No 317
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=26.89 E-value=3.3e+02 Score=24.05 Aligned_cols=108 Identities=10% Similarity=0.068 Sum_probs=58.7
Q ss_pred CEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeE-------eeCC-eEEEEcccCCC-cCcceeEE
Q 020245 83 HTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTA-------ADDR-HVYIFGGCGVS-GRLNDLWG 153 (329)
Q Consensus 83 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-------~~~~-~i~v~GG~~~~-~~~~~~~~ 153 (329)
+.||+.-.. ...+.++|+.++..+.+...+.....+-...++ ..++ .||+.--.... .....++.
T Consensus 152 ~~Lyv~~~~------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~ 225 (496)
T 3kya_A 152 DHLYICYDG------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYI 225 (496)
T ss_dssp EEEEEEEET------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEE
T ss_pred CEEEEEECC------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEE
Confidence 578987432 256999999999888776553222223333333 2344 58777443211 12345777
Q ss_pred EEcCC-CeE------EEecCCCCCCCCCCCcEEEEE--CCEEEEEeeeCCCCcccEEEEeCC
Q 020245 154 FDVVD-RKW------IQYPSAGENCKGRGGPGLIVT--QGKIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 154 ~~~~~-~~W------~~~~~~~~~~~~~~~~~~~~~--~~~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
++... ..| ..++.. ..-+.++.. ++.||+.--.. ..+++||++
T Consensus 226 i~r~~~G~~~~~~~~~~v~~~------~~p~giavdp~~g~LYvtd~~~----g~V~r~d~~ 277 (496)
T 3kya_A 226 IKRNADGTFDDRSDIQLIAAY------KQCNGATIHPINGELYFNSYEK----GQVFRLDLV 277 (496)
T ss_dssp EECCTTSCCSTTSCEEEEEEE------SCCCCEEECTTTCCEEEEETTT----TEEEEECHH
T ss_pred EecCCCCceeecccceeeccC------CCceEEEEcCCCCeEEEEECCC----CEEEEEecc
Confidence 77544 244 233321 111233333 46788765322 579999987
No 318
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=25.98 E-value=3.1e+02 Score=23.38 Aligned_cols=60 Identities=10% Similarity=-0.014 Sum_probs=34.1
Q ss_pred CeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCC
Q 020245 134 RHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPA 206 (329)
Q Consensus 134 ~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~ 206 (329)
+.+++.|+.+ ..+..||+.+..-.. ... .....-.+++. -+++.++.|+.+ ..+..||..
T Consensus 162 ~~~las~s~D-----g~v~iwD~~~~~~~~-~~~---~~~~~v~~v~wspdg~~lasgs~d----g~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLAD-----GSIAVLQVTETVKVC-ATL---PSTVAVTSVCWSPKGKQLAVGKQN----GTVVQYLPT 222 (434)
T ss_dssp TTEEEEEETT-----SCEEEEEESSSEEEE-EEE---CGGGCEEEEEECTTSSCEEEEETT----SCEEEECTT
T ss_pred CCEEEEEECC-----CeEEEEEcCCCccee-ecc---CCCCceeEEEEcCCCCEEEEEcCC----CcEEEEccC
Confidence 5677777764 468889988773221 111 11111222222 256677777754 478888887
No 319
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.88 E-value=4.1e+02 Score=24.75 Aligned_cols=150 Identities=7% Similarity=0.083 Sum_probs=77.1
Q ss_pred CceEEEeCCC--CcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccC----CCCCCCceEEEECCC--------CcEEE
Q 020245 48 NNLHVFDLET--LTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDG----THKELNELYSFDTRT--------NQWTL 113 (329)
Q Consensus 48 ~~~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~~~d~~~--------~~W~~ 113 (329)
++++..|... .+|.++.. ++...-....++.+|+....+- .......+...|..+ ..|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKINM------PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp EEEEEEECSSSSCEEEECCS------CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred eeEEEEcCCCCCCcceEeec------CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceE
Confidence 5666666542 45666532 2222223567889999763320 112456788888654 46886
Q ss_pred cccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEe--cCCCCCCCCCCCcEEEE--EC-CEEEE
Q 020245 114 LSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQY--PSAGENCKGRGGPGLIV--TQ-GKIWV 188 (329)
Q Consensus 114 ~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~--~~~~~~~~~~~~~~~~~--~~-~~l~v 188 (329)
+-... ..+.-..+...++.+++..-.+. ...+.++++.+++|... ..++ .. ....... .+ +.+++
T Consensus 343 ~~~~~---~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~~~~~i~lp---~~-~~~~~~~~~~~~~~~~~ 412 (711)
T 4hvt_A 343 LFTPT---ANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWTKPVVLKLP---YQ-NAIFGMSSYEEEEEALI 412 (711)
T ss_dssp EECCC---TTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEECCCEEECCC---ST-TCEEEEECCTTCSCEEE
T ss_pred EECCC---CCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceEEEeccCCC---CC-eEEEEEeecCcCCEEEE
Confidence 33221 12233333445667766543222 25688888888887432 2221 11 1122221 12 33433
Q ss_pred EeeeCCCCcccEEEEeCCCCceEEeec
Q 020245 189 VYGFAGVEVDDVHCFDPAHAQWAQVET 215 (329)
Q Consensus 189 ~gG~~~~~~~~~~~~d~~~~~w~~~~~ 215 (329)
.. .+......++.+|.. .+++.+..
T Consensus 413 ~~-ss~~~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 413 TI-ENSIVPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp EE-ECSSSCCEEEEECTT-SCEEEEEC
T ss_pred EE-ecCCCCCEEEEEeCC-CcEEEEec
Confidence 32 222245688889887 66666653
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.87 E-value=4e+02 Score=24.29 Aligned_cols=175 Identities=9% Similarity=-0.051 Sum_probs=96.4
Q ss_pred CceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcc
Q 020245 48 NNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRS 125 (329)
Q Consensus 48 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~ 125 (329)
.++.++|+.+..-..+.+ ++....-.++... ++.||+.- .....++++++.....+.+-..+ ...-
T Consensus 15 ~~I~~i~l~~~~~~~~~~---~~~~~~~~~l~~d~~~~~lywtD------~~~~~I~r~~~~g~~~~~v~~~g---~~~P 82 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIP---LTGVKEASALDFDVTDNRIYWTD------ISLKTISRAFMNGSALEHVVEFG---LDYP 82 (628)
T ss_dssp TEEEEEESSCTTCEEECC---CCSCSCEEEEEEETTTTEEEEEE------TTTTEEEEEETTSCSCEEEECSS---CSCC
T ss_pred CcEEEEECCCCCcceEEE---cCCCCceEEEEEECCCCEEEEEE------CCCCeEEEEECCCCCcEEEEeCC---CCCc
Confidence 567788887654322221 1111222333333 57899963 23468899998876555544332 1111
Q ss_pred cceeEe--eCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCC-cEEEEE--CCEEEEEeeeCCCCcccE
Q 020245 126 YHSTAA--DDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGG-PGLIVT--QGKIWVVYGFAGVEVDDV 200 (329)
Q Consensus 126 ~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~~~~--~~~l~v~gG~~~~~~~~~ 200 (329)
..+++ .+++||+.-. ....++++++....-+.+... .... ..+++. ++.||+.--. ....|
T Consensus 83 -~GlAvD~~~~~LY~tD~-----~~~~I~v~~~dG~~~~~l~~~-----~l~~P~~iavdp~~G~lY~tD~g---~~~~I 148 (628)
T 4a0p_A 83 -EGMAVDWLGKNLYWADT-----GTNRIEVSKLDGQHRQVLVWK-----DLDSPRALALDPAEGFMYWTEWG---GKPKI 148 (628)
T ss_dssp -CEEEEETTTTEEEEEET-----TTTEEEEEETTSTTCEEEECS-----SCCCEEEEEEETTTTEEEEEECS---SSCEE
T ss_pred -ceEEEEeCCCEEEEEEC-----CCCEEEEEecCCCcEEEEEeC-----CCCCcccEEEccCCCeEEEeCCC---CCCEE
Confidence 12233 5789999733 226789999876543333211 1112 233333 5789987521 13689
Q ss_pred EEEeCCCCceEEeeccCCCCCCcceeEEEEE--CCEEEEEcCccCCCCCCcCCCCeeeceeEEEEcCCc
Q 020245 201 HCFDPAHAQWAQVETSGEKPTARSVFSTVGI--GKHIVVYGGEVDPSDLGHLGAGKFAGELYSLDTETL 267 (329)
Q Consensus 201 ~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (329)
++.+++...-+.+.. .+. ...+++.- ++.||+.-.. .+.|+++|+...
T Consensus 149 ~r~~~dG~~~~~l~~--~~~---~P~GlalD~~~~~LY~aD~~--------------~~~I~~~d~dG~ 198 (628)
T 4a0p_A 149 DRAAMDGSERTTLVP--NVG---RANGLTIDYAKRRLYWTDLD--------------TNLIESSNMLGL 198 (628)
T ss_dssp EEEETTSCSCEEEEC--SCS---SEEEEEEETTTTEEEEEETT--------------TTEEEEEETTSC
T ss_pred EEEeCCCCceEEEEC--CCC---CcceEEEccccCEEEEEECC--------------CCEEEEEcCCCC
Confidence 999987766666553 111 22233333 5789998643 357888988654
No 321
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.51 E-value=4.7e+02 Score=25.01 Aligned_cols=150 Identities=6% Similarity=-0.024 Sum_probs=72.0
Q ss_pred CCEEEEEcCccCCCCccCCceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEECCEEEEEccccCCCCCCCceEEEECCCC
Q 020245 30 GQKVYAFGGEFTPRVPVDNNLHVFDLETLTWSVADVTGDVPPPRVGVTMAAVGHTIYMFGGRDGTHKELNELYSFDTRTN 109 (329)
Q Consensus 30 ~~~l~~~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 109 (329)
++++++.|+.+ ..+..||....+-.. .. +....-..++...+++++.++.+ ..+..+|..+.
T Consensus 28 dg~~lAsgs~D-------g~I~lw~~~~~~~~~--~~---~~~~~V~~l~fspg~~L~S~s~D------~~v~lWd~~~~ 89 (902)
T 2oaj_A 28 TQNLLAIATVT-------GEVHIYGQQQVEVVI--KL---EDRSAIKEMRFVKGIYLVVINAK------DTVYVLSLYSQ 89 (902)
T ss_dssp TTTEEEEEETT-------SEEEEECSTTCEEEE--EC---SSCCCEEEEEEETTTEEEEEETT------CEEEEEETTTC
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCcEEEE--Ec---CCCCCEEEEEEcCCCEEEEEECc------CeEEEEECCCC
Confidence 55677777643 568888876544322 11 11111122222335544554433 56888898876
Q ss_pred cEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecC-------CCCCCCCCCCcEEEEE
Q 020245 110 QWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPS-------AGENCKGRGGPGLIVT 182 (329)
Q Consensus 110 ~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~-------~~~~~~~~~~~~~~~~ 182 (329)
+-...-.. + ..-......-+++.++.|+.+ ..+..||+.+.+-..... .........-.+++..
T Consensus 90 ~~~~~~~~---~-~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 90 KVLTTVFV---P-GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp SEEEEEEC---S-SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred cEEEEEcC---C-CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 53211111 1 111111112255666666654 468889998876432211 0000011122233344
Q ss_pred C--CEEEEEeeeCCCCcccEEEEeCCCCceE
Q 020245 183 Q--GKIWVVYGFAGVEVDDVHCFDPAHAQWA 211 (329)
Q Consensus 183 ~--~~l~v~gG~~~~~~~~~~~~d~~~~~w~ 211 (329)
. ..++++|+.+ ..+ .||..+.+-.
T Consensus 161 p~~~~~l~~g~~d----g~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 161 PRDIGTVLISYEY----VTL-TYSLVENEIK 186 (902)
T ss_dssp TTEEEEEEEECSS----CEE-EEETTTTEEE
T ss_pred cCCCCEEEEEeCC----CcE-EEECCCCceE
Confidence 3 2466666543 456 8888776543
No 322
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=23.84 E-value=3e+02 Score=22.43 Aligned_cols=179 Identities=10% Similarity=-0.029 Sum_probs=0.0
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++++++.|+.+ .+..||..+.+-...... ............+.+.+.|+.+. .+..||..+++-
T Consensus 30 dg~~la~g~~~-------~~~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~-----~v~iWd~~~~~~ 93 (355)
T 3vu4_A 30 DQSCLILSTLK-------SFEIYNVHPVAHIMSQEM----RHLSKVRMLHRTNYVAFVTGVKE-----VVHIWDDVKKQD 93 (355)
T ss_dssp TSSEEEEECSS-------EEEEEEETTEEEEEEEEC----SCCCEEEECTTSSEEEEECSSTT-----EEEEEETTTTEE
T ss_pred CCCEEEEEcCC-------EEEEEecCCcceeeeeec----CCeEEEEEcCCCCEEEEEECCcc-----EEEEEECCCCcE
Q ss_pred EEecCCCCCCCCCCCcEEEEECCEEEEEeeeCCCCcccEEEEeCCCC--ceEEeeccCCCCCCcceeEEEEECCEEEEE-
Q 020245 162 IQYPSAGENCKGRGGPGLIVTQGKIWVVYGFAGVEVDDVHCFDPAHA--QWAQVETSGEKPTARSVFSTVGIGKHIVVY- 238 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~l~v~gG~~~~~~~~~~~~d~~~~--~w~~~~~~~~~p~~r~~~~~~~~~~~i~i~- 238 (329)
...-.. ...-.++....+.+++... ..+..||..+. .-..+.. ....++...+.+.+.
T Consensus 94 ~~~~~~-----~~~v~~v~~~~~~~~~~~~------~~i~i~d~~~~~~~~~~~~~--------~~~~~~~s~~~la~~s 154 (355)
T 3vu4_A 94 VSRIKV-----DAPVKDLFLSREFIVVSYG------DVISVFKFGNPWKRITDDIR--------FGGVCEFSNGLLVYSN 154 (355)
T ss_dssp EEEEEC-----SSCEEEEEECSSEEEEEET------TEEEEEESSTTCCBSSCCEE--------EEEEEEEETTEEEEEE
T ss_pred EEEEEC-----CCceEEEEEcCCEEEEEEc------CEEEEEECCCCceeeEEecc--------CCceEEEEccEEEEeC
Q ss_pred cCccCCCCCCcCCCCeeeceeEEEEcCCce-----------------eEeecCCCCCCCCCCCCCcceecccccCCcceE
Q 020245 239 GGEVDPSDLGHLGAGKFAGELYSLDTETLV-----------------WTRWDDGPGSDHHPGPRGWCAFAGGLRGGKHGL 301 (329)
Q Consensus 239 GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----------------W~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~~i 301 (329)
|+. ...+..+|+.+.. -..+.. ...... ..+.-.+++ +
T Consensus 155 g~~--------------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-------h~~~v~--~~~~s~~g~--~ 209 (355)
T 3vu4_A 155 EFN--------------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-------HTNPIK--MVRLNRKSD--M 209 (355)
T ss_dssp SSC--------------TTCEEEEECCC------------------CCEEECC-------CSSCEE--EEEECTTSS--E
T ss_pred CCc--------------CcEEEEEECCCCCccccccccccccccCcccEEEEc-------cCCceE--EEEECCCCC--E
Q ss_pred EEEcCCCCCCCcccc-eEEEecccCC
Q 020245 302 LVYGGNSPSNDRLDD-IYFFTPCLDG 326 (329)
Q Consensus 302 ~i~GG~~~~~~~~~~-v~~~~~~~~~ 326 (329)
++.|+.+. . |.++|+++.+
T Consensus 210 l~s~s~d~------~~v~iwd~~~~~ 229 (355)
T 3vu4_A 210 VATCSQDG------TIIRVFKTEDGV 229 (355)
T ss_dssp EEEEETTC------SEEEEEETTTCC
T ss_pred EEEEeCCC------CEEEEEECCCCc
No 323
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=23.04 E-value=5e+02 Score=24.82 Aligned_cols=104 Identities=5% Similarity=-0.002 Sum_probs=50.8
Q ss_pred CCEEEEEccccCCCCCCCceEEEECCCCcEEEcccCCCCCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeE
Q 020245 82 GHTIYMFGGRDGTHKELNELYSFDTRTNQWTLLSNGDAGPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKW 161 (329)
Q Consensus 82 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W 161 (329)
++++++.|+.+ ..+..||..+.+-... .. ....-.++....+++++.|+.+ ..+..||+.+.+-
T Consensus 28 dg~~lAsgs~D------g~I~lw~~~~~~~~~~--~~---~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 28 TQNLLAIATVT------GEVHIYGQQQVEVVIK--LE---DRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKV 91 (902)
T ss_dssp TTTEEEEEETT------SEEEEECSTTCEEEEE--CS---SCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCcEEEEE--cC---CCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcE
Confidence 34555666544 3566677655432221 11 1111112222235555555543 5788899987653
Q ss_pred EEecCCCCCCCCCCCcEEEE-ECCEEEEEeeeCCCCcccEEEEeCCCCce
Q 020245 162 IQYPSAGENCKGRGGPGLIV-TQGKIWVVYGFAGVEVDDVHCFDPAHAQW 210 (329)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~l~v~gG~~~~~~~~~~~~d~~~~~w 210 (329)
...-.. .. .-.++.. -++..++.|+.+ ..+..||..+.+-
T Consensus 92 ~~~~~~----~~-~V~~v~~sp~g~~l~sgs~d----g~V~lwd~~~~~~ 132 (902)
T 2oaj_A 92 LTTVFV----PG-KITSIDTDASLDWMLIGLQN----GSMIVYDIDRDQL 132 (902)
T ss_dssp EEEEEC----SS-CEEEEECCTTCSEEEEEETT----SCEEEEETTTTEE
T ss_pred EEEEcC----CC-CEEEEEECCCCCEEEEEcCC----CcEEEEECCCCcc
Confidence 322211 11 1112222 245566666644 4678888877654
No 324
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=21.60 E-value=3.3e+02 Score=22.18 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=11.2
Q ss_pred ccEEEEeCC-CCceEEe
Q 020245 198 DDVHCFDPA-HAQWAQV 213 (329)
Q Consensus 198 ~~~~~~d~~-~~~w~~~ 213 (329)
+.++.|+.+ +.+.+.+
T Consensus 167 ~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 167 NKLWTHRKLASGEVELV 183 (365)
T ss_dssp TEEEEEEECTTSCEEEE
T ss_pred CEEEEEEECCCCCEEEe
Confidence 578889887 6665544
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=20.23 E-value=6.5e+02 Score=25.08 Aligned_cols=164 Identities=9% Similarity=0.070 Sum_probs=83.7
Q ss_pred ceEEEeCCCCcEEEEeeCCCCCCCCcceeEEEE--C---CEEEEEccccC----CCCCCCceEEEECCCCcEEEcccCCC
Q 020245 49 NLHVFDLETLTWSVADVTGDVPPPRVGVTMAAV--G---HTIYMFGGRDG----THKELNELYSFDTRTNQWTLLSNGDA 119 (329)
Q Consensus 49 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~----~~~~~~~~~~~d~~~~~W~~~~~~~~ 119 (329)
.+..+|+. .|+.+.... +...-...+++.+ . ..++++|-... .......++.|+...++.+.+...
T Consensus 808 ~i~lidp~--t~~~i~~~~-l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~-- 882 (1158)
T 3ei3_A 808 NLLIIDQH--TFEVLHAHQ-FLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK-- 882 (1158)
T ss_dssp EEEEEETT--TCCEEEEEE-CCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEE--
T ss_pred EEEEEeCC--CCeEEEEEe-CCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEE--
Confidence 45567775 465554432 2222222223322 2 35667764321 112445688888776676666544
Q ss_pred CCCCcccceeEeeCCeEEEEcccCCCcCcceeEEEEcCCCeEEEecCCCCCCCCCCCc-EEEEECCEEEEEeeeCCCCcc
Q 020245 120 GPPHRSYHSTAADDRHVYIFGGCGVSGRLNDLWGFDVVDRKWIQYPSAGENCKGRGGP-GLIVTQGKIWVVYGFAGVEVD 198 (329)
Q Consensus 120 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~~l~v~gG~~~~~~~ 198 (329)
+..-.-.+++.+++++++.=| ..+..|+...++--..... ..+.... .....++. +++|... ..-
T Consensus 883 -~v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~---~~~~i~~~~l~~~~~~-I~vgD~~--~Sv 948 (1158)
T 3ei3_A 883 -EVKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECN---HYNNIMALYLKTKGDF-ILVGDLM--RSV 948 (1158)
T ss_dssp -EESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEE---ECCCSCEEEEEEETTE-EEEEESS--BCE
T ss_pred -EcCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEee---ccccEEEEEEeccCCE-EEEEEhh--heE
Confidence 222234455567887776655 5677888765542111110 0011111 12234554 4455432 224
Q ss_pred cEEEEeCCCCceEEeeccCCCCCCcceeEEEEECCE
Q 020245 199 DVHCFDPAHAQWAQVETSGEKPTARSVFSTVGIGKH 234 (329)
Q Consensus 199 ~~~~~d~~~~~w~~~~~~~~~p~~r~~~~~~~~~~~ 234 (329)
.+..|+...++-..+... ..+|...++..+++.
T Consensus 949 ~~~~y~~~~~~L~~~a~D---~~~~~vta~~~ld~~ 981 (1158)
T 3ei3_A 949 LLLAYKPMEGNFEEIARD---FNPNWMSAVEILDDD 981 (1158)
T ss_dssp EEEEEETTTTEEEEEEEC---CSCBCEEEEEEEETT
T ss_pred EEEEEEcCCCeEEEEEee---cccccEEEEEEEccC
Confidence 567788888888888753 366766666665443
Done!