BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020249
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R1N0|ZN830_MOUSE Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1
Length = 363
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 53/354 (14%)
Query: 9 IFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIK 68
+ R K KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 24 LMREKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELK 83
Query: 69 A--GAT-GNNTRVVSDAAKPEAG-VDSSRSESGSASQNAELE-----NSAKLGKAR-PPS 118
GAT G +T V A K A V+S ++ AS +++ +SA L AR PS
Sbjct: 84 GAKGATQGPSTGTVPQATKRRATDVESQDAKKAKASAGPQVQPSTSASSANLDAARAAPS 143
Query: 119 -----VLPSNFFDNQEVKRPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELPNG 173
+LP +D++E + + + D P K +L S E + LPN
Sbjct: 144 KPGLGLLPD--YDDEEEEEEEGGGEERRDSSKHLPDA-QGKEHSLAS-PRETTSNVLPN- 198
Query: 174 NAVHAEKGQPFKEHPEKSK--QNAGSEAK------------QIKGALPEGFFDNKDADLL 219
PF +P K+ ++GS K ALPEGFFD+ + D
Sbjct: 199 --------DPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDAK 250
Query: 220 ARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEEIDAAEMIEEYESVDQK----EKV 275
R + K + E+ E++K +++ + + + + EE + + + +D++ +V
Sbjct: 251 VRKVDAPKDQMDKEWDEFQKAMRQ-VNTISEAIVAEEDEEGRLDRQIGEIDEQIECYRRV 309
Query: 276 EALRKKKKEWEASSRSAKSRGSSEVARKEPPKEELSSDDDSE--EIFAVDWRAQ 327
E LR ++ E + + + E+ +KE +E + SDD+ E ++ + DWR +
Sbjct: 310 EKLRNRQDEIKNKLKEVLT--IKELQKKE--EENVDSDDEGELQDLLSQDWRVK 359
>sp|Q6DJ13|ZN830_XENTR Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1
Length = 357
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 166/374 (44%), Gaps = 75/374 (20%)
Query: 2 DAARKKAI----FRAKLNAQKK----EKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDA 53
DA +KK + R + A+++ +KRI SPL +YN +C VC++ +KS+ W A
Sbjct: 3 DAGKKKLVQQEELRRLMKAKQRRSCSKKRIESPLAKYNSLGHLLCVVCNIQIKSELLWPA 62
Query: 54 HQASRKHHEAIKNIKAGATGNNTRVVSDAAKPEAGVDSSRSESGSASQNAELENSAKLGK 113
H ++H E + +K G+ + S + K + R GS +N E K +
Sbjct: 63 HILGKQHKEKVAELK----GSKANISSPSNKVQLHHIMKR--KGSEPENQE-SKRIKGTE 115
Query: 114 ARPPSV---LPSNFFDNQEVKRP-----KTDSVKL------------------VDPDST- 146
+P ++ LP FF+ +E K S+KL V+ ST
Sbjct: 116 DQPTALKTKLPEGFFETEETSSAKHAAEKAPSLKLLAGDYEDDDEVEGEEYENVNEASTS 175
Query: 147 --KPSGV-----SAKTQALKSVVLENEMDELPN-GNAVHAEKGQPFKEHPEKSKQNAGSE 198
KP+ + ++ L + E++M + + G+ + A+ +E + K N
Sbjct: 176 LQKPAEIPLPPPTSSADRLPADFFESKMPLVSHSGSVLKAD----IQEKIVERKDNTAE- 230
Query: 199 AKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEEID 258
ALPEGFFD+ +AD R + K + E++E++K I++ + V D + EE +
Sbjct: 231 ------ALPEGFFDDPEADAKVRKVDAPKDQMDKEWEEFQKEIRQ-VNSVSDAIVAEEDE 283
Query: 259 AAEMIEEYESVDQK----EKVEALRKKKKEWE-ASSRSAKSRGSSEVARKEPPKEELSSD 313
+ + + +D++ +VE LR K + A KS+ S + +EE+ SD
Sbjct: 284 EGRLDRQIDEIDEQIECYRRVEHLRDLKDTLQDAKMEVLKSKSSKKW------QEEIGSD 337
Query: 314 DDSE--EIFAVDWR 325
D+ + +WR
Sbjct: 338 DEETLPSLLYKNWR 351
>sp|Q63ZM9|ZN830_XENLA Zinc finger protein 830 OS=Xenopus laevis GN=znf830 PE=2 SV=1
Length = 356
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 59/315 (18%)
Query: 7 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKN 66
+ + +AK +KRI SPL +YN C VC+ ++KS+ W AH ++H E +
Sbjct: 16 RKLMKAKQRESSSKKRIESPLAKYNSLGHLSCVVCNSLIKSELLWPAHILGKQHKEKVAE 75
Query: 67 IKAGATGNNTRVVSDAAKPEAGVDSSRSESGSASQNAELENSAKLGKARPPSV----LPS 122
+K ++ P ++ R S+ + E+ G PS LP
Sbjct: 76 LKGTKATTSS--------PSNTIEYPRITKRKGSEPEKQESKRTKGSEDHPSASTTKLPE 127
Query: 123 NFFDNQEV------------------------------KRPKTDSVKLVDPDSTKPSGVS 152
FF+ ++ + K S L+ P +
Sbjct: 128 EFFEKEKTSSAGNAPSLKLLAGDYEDVDDDDAEEGEEYENAKEASSSLLKPAEIPLPPPT 187
Query: 153 AKTQALKSVVLENEMDELPN-GNAVHAEKGQPFKEHPEKSKQNAGSEAKQIKGALPEGFF 211
+ L + EN+M + + G+ + A+ + E E + + ALPEGFF
Sbjct: 188 SSADNLPADFFENKMPLVSHSGSVLKADIQEKIVERKENTAE-----------ALPEGFF 236
Query: 212 DNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEEIDAAEMIEEYESVDQ 271
D+ + D R + K + E++E++K I++ + V + + EE + + + + +D+
Sbjct: 237 DDPEVDAKVRKVDAPKDQMDKEWEEFQKEIRQ-VNTVSEAIVAEEDEEGRLDRQIDEIDE 295
Query: 272 K----EKVEALRKKK 282
+ +VE LR +K
Sbjct: 296 QIQCYRRVEHLRDRK 310
>sp|Q3MHS2|ZN830_RAT Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1
Length = 370
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 154/358 (43%), Gaps = 54/358 (15%)
Query: 9 IFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIK 68
+ + K KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 24 LMKEKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELK 83
Query: 69 A--GATGN-------------NTRVVS-DAAKPEAGVDSSRSESGSASQNAELEN--SAK 110
GAT T V S DA K +A VD + + ++S N E + +
Sbjct: 84 GAKGATQGPSAGTAPQPTKRKTTDVESQDAKKAKASVDQVQPSTSASSANFEKSGKEATR 143
Query: 111 LGKARPPSVLPSNFFDNQEVKRPKTDSVKLVDPDSTKP-SGVSAKTQALKSVVLENEMDE 169
+ ++ L ++ + +E + + DS+K + +L S E +
Sbjct: 144 VASSKTGLGLLPDYEEEEEEEEEEELGGGEERRDSSKHLPDAQGREHSLAS-PRETTSNV 202
Query: 170 LPNGNAVHAEKGQPFKEHPEKSKQ--NAGSEAK------------QIKGALPEGFFDNKD 215
LPN PF +P K+ ++GS K ALPEGFFD+ +
Sbjct: 203 LPN---------DPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPE 253
Query: 216 ADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEEIDAAEMIEEYESVDQK--- 272
D R + K + E+ E++K +++ + + + + EE + + + +D++
Sbjct: 254 VDAKVRKVDAPKDQMDKEWDEFQKAMRQ-VNTISEAIVAEEDEEGRLDRQIGEIDEQIEC 312
Query: 273 -EKVEALRKKKKEWEASSRSAKSRGSSEVARKEPPKEELSSDDDSE--EIFAVDWRAQ 327
+VE LR ++ E + + + E+ +KE +E + SDD+ E ++ + DWR +
Sbjct: 313 YRRVEKLRNRQDEIKNKLKEVLT--IKELQKKE--EENVDSDDEGELQDLLSQDWRVK 366
>sp|Q96NB3|ZN830_HUMAN Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=2
Length = 372
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 21 KRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAG 70
KRI SP +YN Q C +C+ +KS+ W H ++H E + +K
Sbjct: 36 KRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAELKGA 85
>sp|Q6P0I6|ZN830_DANRE Zinc finger protein 830 OS=Danio rerio GN=znf830 PE=2 SV=1
Length = 326
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 19 KEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNT 76
++KR+ SP RY+ Q +C +CD +K+ W H ++H + ++ +K+ +T
Sbjct: 31 RQKRVESPFARYSGAGQLMCALCDAPVKNALLWQTHVLGKQHKDKLQELKSRTAPAHT 88
>sp|P34216|EDE1_YEAST EH domain-containing and endocytosis protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EDE1 PE=1 SV=2
Length = 1381
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 220 ARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEEIDAAEMIEEYESVDQKEKVEALR 279
I PVK + DE+ E+ E+ D E E + A +E++E++D K+ + L+
Sbjct: 1192 TNSILPVKDEFDDEFAGLEQAAVEEDNGADSESEFENVANAGSMEQFETIDHKDLDDELQ 1251
Query: 280 KKKKEWEASSRSAKSRGSSEVARKEPPKEELSSDDDSEEIFA 321
+S S + +V ++ S+D+ +EIFA
Sbjct: 1252 MNAFTGTLTSSSNPTIPKPQVQQQSTSDPAQVSNDEWDEIFA 1293
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVV----------SDAAKPEA 87
C VC + SDSQ +AH KH + +K ++ AT N ++V S + +P
Sbjct: 171 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALE--ATKNKPKMVPSKDSAKANPSCSIRPGT 228
Query: 88 GVDSSRSE 95
G S +SE
Sbjct: 229 GDSSDKSE 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.124 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,457,509
Number of Sequences: 539616
Number of extensions: 5352495
Number of successful extensions: 28092
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 1075
Number of HSP's that attempted gapping in prelim test: 23586
Number of HSP's gapped (non-prelim): 3847
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 61 (28.1 bits)