Query 020253
Match_columns 328
No_of_seqs 242 out of 2135
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 14:05:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 1.8E-50 6.1E-55 364.0 26.8 281 8-297 2-309 (312)
2 3htm_A Speckle-type POZ protei 100.0 2.9E-31 1E-35 218.0 14.6 155 142-297 14-169 (172)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 9.7E-31 3.3E-35 228.6 14.1 168 143-316 12-183 (256)
4 3i3n_A Kelch-like protein 11; 100.0 4E-30 1.4E-34 227.4 10.7 167 143-315 13-190 (279)
5 4eoz_A Speckle-type POZ protei 100.0 1.6E-29 5.6E-34 201.7 6.6 141 142-283 5-145 (145)
6 2if5_A Zinc finger and BTB dom 99.9 3.6E-25 1.2E-29 170.6 10.8 111 145-257 8-119 (120)
7 1r29_A B-cell lymphoma 6 prote 99.9 1E-24 3.6E-29 169.7 11.3 114 144-260 11-126 (127)
8 2z8h_A Transcription regulator 99.9 9.5E-25 3.3E-29 172.4 8.1 119 143-265 17-137 (138)
9 2ppi_A Gigaxonin; BTB domain, 99.9 1.7E-24 5.8E-29 172.0 8.4 113 144-258 29-144 (144)
10 2vkp_A BTB/POZ domain-containi 99.9 2.6E-24 8.8E-29 162.9 8.9 103 156-261 2-109 (109)
11 3b84_A Zinc finger and BTB dom 99.9 1.4E-24 4.9E-29 166.9 7.3 110 145-260 7-117 (119)
12 1buo_A POZ domain, protein (pr 99.9 7.6E-24 2.6E-28 163.4 10.4 110 144-260 10-120 (121)
13 2vpk_A Myoneurin; transcriptio 99.9 6.2E-24 2.1E-28 162.7 9.7 108 145-258 5-115 (116)
14 2yy9_A Zinc finger and BTB dom 99.9 2.5E-24 8.7E-29 169.2 7.4 115 144-264 7-122 (135)
15 3ohu_A Transcription regulator 99.9 2E-24 6.9E-29 167.6 3.8 111 143-257 13-125 (125)
16 3ga1_A Nucleus accumbens-assoc 99.9 6E-24 2.1E-28 165.8 5.2 111 144-260 15-127 (129)
17 2ihc_A Transcription regulator 99.9 4E-24 1.4E-28 165.6 3.5 112 143-258 10-123 (124)
18 2q81_A MIZ-1 protein; BTB/POZ 99.9 1.4E-23 4.6E-28 161.4 6.4 108 144-258 9-117 (119)
19 3m5b_A Zinc finger and BTB dom 99.9 4.2E-22 1.4E-26 152.7 7.8 102 145-259 15-117 (119)
20 3fkc_A Transcriptional regulat 99.9 2.4E-21 8.1E-26 148.0 9.9 103 144-251 13-115 (116)
21 3ivv_A Speckle-type POZ protei 99.8 3.7E-19 1.3E-23 141.4 9.8 112 9-122 7-143 (145)
22 2foj_A Ubiquitin carboxyl-term 99.8 2E-18 6.8E-23 138.8 11.1 117 10-130 16-153 (155)
23 4gjh_A TNF receptor-associated 99.7 5.6E-18 1.9E-22 139.1 9.5 113 8-120 19-171 (178)
24 1lb6_A TNF receptor-associated 99.7 1.9E-17 6.6E-22 133.7 10.4 113 10-122 2-156 (160)
25 4ghu_A TNF receptor-associated 99.7 9.4E-18 3.2E-22 139.6 8.8 112 9-121 36-186 (198)
26 2gkw_A TNF receptor-associated 99.7 1.5E-17 5.3E-22 138.0 6.5 112 10-121 37-186 (192)
27 1ca9_A TRAF2, protein (TNF rec 99.7 4.9E-17 1.7E-21 135.2 8.1 112 10-121 40-189 (192)
28 1d00_A Tumor necrosis factor r 99.7 7.3E-17 2.5E-21 131.4 7.7 113 9-121 15-165 (168)
29 1flk_A TNF receptor associated 99.7 6.6E-17 2.3E-21 137.7 6.6 111 10-121 73-222 (228)
30 2f1z_A Ubiquitin carboxyl-term 99.5 2.4E-14 8.2E-19 137.0 11.1 111 10-121 28-159 (522)
31 2ast_A S-phase kinase-associat 99.4 2.6E-13 9E-18 108.9 9.1 101 165-266 3-131 (159)
32 4ajy_C Transcription elongatio 99.2 1.4E-11 4.7E-16 90.2 7.3 79 165-246 4-97 (97)
33 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 3.4E-10 1.2E-14 88.6 6.9 99 165-268 4-128 (141)
34 2p1m_A SKP1-like protein 1A; F 99.0 2E-10 6.7E-15 92.0 2.7 104 165-272 6-139 (160)
35 1hv2_A Elongin C, ELC1; protei 98.5 2E-07 6.8E-12 68.0 6.0 81 164-246 5-99 (99)
36 2fnj_C Transcription elongatio 98.4 1.6E-07 5.5E-12 68.1 4.6 81 165-246 3-96 (96)
37 3v7d_A Suppressor of kinetocho 98.4 9.3E-07 3.2E-11 71.1 9.5 102 164-266 8-138 (169)
38 3drz_A BTB/POZ domain-containi 98.4 6.9E-07 2.3E-11 66.2 8.0 95 164-259 7-106 (107)
39 2eqx_A Kelch repeat and BTB do 98.2 1.9E-06 6.4E-11 63.7 5.5 55 258-316 5-60 (105)
40 1vcb_B Protein (elongin C); tu 98.0 5.5E-06 1.9E-10 61.6 5.3 82 164-246 18-112 (112)
41 3drx_A BTB/POZ domain-containi 97.4 0.00012 4E-09 59.8 4.0 96 164-260 13-113 (202)
42 4gwm_A Meprin A subunit beta; 97.2 0.002 6.7E-08 61.6 11.1 72 10-81 403-485 (592)
43 3kvt_A Potassium channel prote 95.9 0.0011 3.8E-08 49.3 -0.4 96 164-260 6-105 (115)
44 1s1g_A Potassium voltage-gated 95.4 0.011 3.6E-07 44.6 3.5 92 163-258 13-110 (124)
45 1t1d_A Protein (potassium chan 95.1 0.011 3.6E-07 42.8 2.4 83 165-250 3-90 (100)
46 1nn7_A Potassium channel KV4.2 94.3 0.0099 3.4E-07 43.3 0.6 81 165-249 2-86 (105)
47 2nz0_B Potassium voltage-gated 94.2 0.024 8.1E-07 43.6 2.6 84 162-249 34-121 (140)
48 2vkp_A BTB/POZ domain-containi 85.1 1.1 3.6E-05 32.1 4.4 30 261-290 77-106 (109)
49 2eqx_A Kelch repeat and BTB do 79.0 1.2 4.2E-05 31.9 2.7 31 231-261 10-40 (105)
50 2q81_A MIZ-1 protein; BTB/POZ 78.8 2.2 7.5E-05 31.1 4.1 30 261-290 88-117 (119)
51 2vpk_A Myoneurin; transcriptio 77.0 2.9 9.8E-05 30.3 4.3 30 261-290 86-115 (116)
52 1r29_A B-cell lymphoma 6 prote 76.9 2.8 9.6E-05 30.9 4.3 30 261-290 95-124 (127)
53 2if5_A Zinc finger and BTB dom 76.1 3.4 0.00012 30.0 4.5 29 261-289 91-119 (120)
54 1buo_A POZ domain, protein (pr 76.1 3.5 0.00012 30.1 4.6 30 261-290 89-118 (121)
55 2z8h_A Transcription regulator 74.6 1.5 5.2E-05 33.0 2.3 30 261-290 101-130 (138)
56 2r9r_B Paddle chimera voltage 71.8 2.6 9E-05 39.5 3.6 83 164-250 53-141 (514)
57 2yy9_A Zinc finger and BTB dom 71.2 2.2 7.4E-05 32.0 2.4 30 261-290 87-116 (135)
58 3htm_A Speckle-type POZ protei 71.0 3.8 0.00013 31.8 3.9 30 261-290 100-129 (172)
59 3b84_A Zinc finger and BTB dom 70.1 2.8 9.6E-05 30.6 2.7 30 261-290 86-115 (119)
60 2ppi_A Gigaxonin; BTB domain, 67.5 3 0.0001 31.7 2.5 29 261-289 115-143 (144)
61 3m5b_A Zinc finger and BTB dom 60.8 6.8 0.00023 28.6 3.3 30 261-290 87-116 (119)
62 4eoz_A Speckle-type POZ protei 49.5 9 0.00031 28.6 2.4 30 261-290 91-120 (145)
63 3ga1_A Nucleus accumbens-assoc 47.6 3.6 0.00012 30.4 -0.2 31 260-290 95-125 (129)
64 3hqi_A Speckle-type POZ protei 47.5 14 0.00048 31.8 3.6 28 263-290 242-269 (312)
65 3hve_A Gigaxonin; ubiquitin, c 41.4 24 0.00081 29.3 4.0 30 261-290 99-128 (256)
66 3i3n_A Kelch-like protein 11; 40.4 18 0.00062 30.5 3.1 30 261-290 107-136 (279)
67 2ihc_A Transcription regulator 38.3 2 6.9E-05 31.6 -2.9 29 261-289 94-122 (124)
68 2plx_B Peptide inhibitor; heli 37.8 29 0.001 17.0 2.3 21 268-288 3-23 (26)
69 2ast_A S-phase kinase-associat 28.9 70 0.0024 24.3 4.6 37 252-290 87-123 (159)
70 3v0r_A Major allergen ALT A 1; 27.9 12 0.00041 27.7 -0.1 30 5-34 4-37 (133)
71 2k8e_A UPF0339 protein YEGP; p 25.4 36 0.0012 25.3 2.1 30 13-43 2-36 (130)
72 1fs1_B SKP1, cyclin A/CDK2-ass 21.2 1.5E+02 0.0053 21.9 5.1 37 252-290 82-118 (141)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=1.8e-50 Score=363.95 Aligned_cols=281 Identities=22% Similarity=0.331 Sum_probs=222.5
Q ss_pred eeccceeEEEEEccCCC-----CceeecCCceecCe---eEEEEEEeCC-----ceEEEEeecccccCCCCCcEEEEEEE
Q 020253 8 VDTTSRLAQWRIDNLAS-----CSYRKSDPFKIGKW---NWHLSLEKNR-----MLFVKLYPEVSNLTRDNPPIASFIIR 74 (328)
Q Consensus 8 ~~~~~~~~~w~I~~~~~-----g~~~~S~~F~vgg~---~W~l~~yp~g-----~~~vsL~~~~~~~~~~w~v~a~f~~~ 74 (328)
.+++.|+|.|+|+||+. |+++.|++|.+||+ +|+|.+||+| ..++++|+...+ ..+|++.|+|+++
T Consensus 2 s~~~~~~~~w~I~nfs~~~~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~-~~~~~v~a~~~~~ 80 (312)
T 3hqi_A 2 SKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVS-CPKSEVRAKFKFS 80 (312)
T ss_dssp EEEEEEEEEEEETTGGGCCCCTTCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEE-CCC-CEEEEEEEE
T ss_pred CceEEEEEEEEEcCcchhhhcCCCeEeeCCcccCCCCCceEEEEEECCCCCccCCCcEEEEEEEcC-CCCCcEEEEEEEE
Confidence 46788999999999973 67899999999996 9999999988 257888887654 3579999999999
Q ss_pred EEecCCCCccccCccccccccccCCceeee-e-----------eceeccceeeeeeeeeeeee-cCCCCCcccccccccc
Q 020253 75 VVSSVGDRKALSHPEITDRQLKNNDDFVWA-I-----------EVPLTGKFIIDVEFLDLKIA-PSDGGEPCSIWAEGIT 141 (328)
Q Consensus 75 l~~~~~~~~~~~~~~~~~~~~~~~~~~~wg-~-----------~~~~~~~l~ve~~v~~~~i~-~~~~~~~~~~~~~~~~ 141 (328)
++|++|+........ ....|..+.+|||. + +|++||+++|+|+|.+.+-. .+.|.. ....
T Consensus 81 l~~~~~~~~~~~~~~-~~~~F~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~------~~~~ 153 (312)
T 3hqi_A 81 ILNAKGEETKAMESQ-RAYRFVQGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQN------TMNM 153 (312)
T ss_dssp EECTTSCEEEEEECS-SCEEECTTCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCC------CCSS
T ss_pred EEeCCCCcccccccC-CceeCCCCCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccccc------cccc
Confidence 999998764432211 11233334444443 1 28899999999999766422 222221 1123
Q ss_pred ccCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhh
Q 020253 142 QKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYI 221 (328)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~i 221 (328)
+.+|++.+.+++..+++++.++||+|.++|++|+|||.+||++||||++||.++++|+.+.+|.|+++++++|+.+|+|+
T Consensus 154 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~i 233 (312)
T 3hqi_A 154 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFI 233 (312)
T ss_dssp CCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhh
Confidence 45677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH-hhhhhhc
Q 020253 222 YGNIEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFD 297 (328)
Q Consensus 222 Y~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~ 297 (328)
||+..+.. .+++.+||.+|++|+++.|+..|+++|.+.++.+|++.++.+|++|++..|++.|++||. |+.++.+
T Consensus 234 Yt~~~~~~-~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~ 309 (312)
T 3hqi_A 234 YTGKAPNL-DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLE 309 (312)
T ss_dssp HHSCCTTH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----
T ss_pred cCCCCCCh-HHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 98743332 288999999999999999999999999999999999999999999999999999999999 8888765
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=218.02 Aligned_cols=155 Identities=28% Similarity=0.431 Sum_probs=140.9
Q ss_pred ccCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhh
Q 020253 142 QKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYI 221 (328)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~i 221 (328)
...|++.+.+++..+++++.++||+|.++|++|+|||.+|+++|+||++||.+++.|+.+.+|.++++++++|+.+|+|+
T Consensus 14 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~ 93 (172)
T 3htm_A 14 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFI 93 (172)
T ss_dssp SCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH-hhhhhhc
Q 020253 222 YGNIEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFD 297 (328)
Q Consensus 222 Y~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~ 297 (328)
|++..... .+++.+++.+|++|+++.|++.|+++|.+.++.+|++.++.+|.+|++..|++.|++||. ||.++.+
T Consensus 94 Yt~~~~~~-~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~ 169 (172)
T 3htm_A 94 YTGKAPNL-DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLE 169 (172)
T ss_dssp HHSCCTTG-GGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----
T ss_pred hCCCCCCc-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHc
Confidence 98743322 288999999999999999999999999999999999999999999999999999999999 9988865
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=9.7e-31 Score=228.57 Aligned_cols=168 Identities=22% Similarity=0.296 Sum_probs=144.3
Q ss_pred cCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCccc--ccCcceEEcCCCCHHHHHHHhhh
Q 020253 143 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLK--EKELSTIDIPDMSIDACQAFLSY 220 (328)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~--e~~~~~v~l~~~~~~~f~~ll~~ 220 (328)
+.++..+++.+..++.++.++||+|.++|++|+|||.+|+++|+||++||.+++. |+.+.+|.++++++++|+.+|+|
T Consensus 12 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~ 91 (256)
T 3hve_A 12 PQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDY 91 (256)
T ss_dssp TTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhh
Confidence 4456789999999999999999999999999999999999999999999999887 67788999999999999999999
Q ss_pred hcCC-ccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH-hhhhhhcc
Q 020253 221 IYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFDI 298 (328)
Q Consensus 221 iY~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~~ 298 (328)
+||+ ...+. +++.+++.+|++|+++.|+..|+++|.+.++++||+.++.+|+.|++..|++.|.+|+. ||.++.+
T Consensus 92 ~Yt~~~~i~~--~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~- 168 (256)
T 3hve_A 92 IFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSS- 168 (256)
T ss_dssp HHHSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccCCCCcccH--hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhC-
Confidence 9987 44444 78999999999999999999999999999999999999999999999999999999999 9999987
Q ss_pred ccchHHHHhhCcHHHHHH
Q 020253 299 RDDFSVFLQCADRELIAE 316 (328)
Q Consensus 299 ~~~~~~~~~~~~~~l~~~ 316 (328)
.++|.+++...+...
T Consensus 169 ---~~~f~~L~~~~l~~l 183 (256)
T 3hve_A 169 ---TEEFLELSPQKLKEV 183 (256)
T ss_dssp ---CHHHHSSCHHHHHHH
T ss_pred ---CcchhcCCHHHHHHH
Confidence 788888875555543
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=4e-30 Score=227.43 Aligned_cols=167 Identities=20% Similarity=0.284 Sum_probs=144.4
Q ss_pred cCChhHHHHHHHHHhcCCCcccEEEEeC---CeEEehhHHHHhccCHHHHHhccCcccccCcceEEcC------CCCHHH
Q 020253 143 KRSNATALASLGRMLTEGIHTDIIINAS---NGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP------DMSIDA 213 (328)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~Dv~l~v~---~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~------~~~~~~ 213 (328)
+.+++.+++.+..++.++.++||+|+++ |++|+|||.+|+++|+||++||.+++.|+.+.+|.|+ ++++++
T Consensus 13 ~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~ 92 (279)
T 3i3n_A 13 SSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDT 92 (279)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHH
T ss_pred HhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHH
Confidence 3456788999999999999999999998 8999999999999999999999999999999999998 899999
Q ss_pred HHHHhhhhcCC-ccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH-h
Q 020253 214 CQAFLSYIYGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-K 291 (328)
Q Consensus 214 f~~ll~~iY~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~-~ 291 (328)
|+.+|+|+||+ ...+. +++.+++.+|++|+++.|+..|+++|.+.++.+||+.++.+|..|++..|++.|.+||. |
T Consensus 93 f~~ll~~~Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 93 VEAVIEYMYTGRIRVST--GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp HHHHHHHHHHSEEEEET--TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhCcCCcccCH--HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999987 44443 78999999999999999999999999999999999999999999999999999999999 9
Q ss_pred hhhhhccccchHHHHhhCcHHHHH
Q 020253 292 FGKIFDIRDDFSVFLQCADRELIA 315 (328)
Q Consensus 292 ~~~v~~~~~~~~~~~~~~~~~l~~ 315 (328)
|.++.+ .++|.+++...+..
T Consensus 171 f~~v~~----~~~f~~L~~~~l~~ 190 (279)
T 3i3n_A 171 FHKVIQ----DEEFYTLPFHLIRD 190 (279)
T ss_dssp HHHHTT----SSGGGGSCHHHHHH
T ss_pred HHHHhc----CcChhcCCHHHHHH
Confidence 999987 67788776555443
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=201.68 Aligned_cols=141 Identities=30% Similarity=0.442 Sum_probs=105.3
Q ss_pred ccCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhh
Q 020253 142 QKRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYI 221 (328)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~i 221 (328)
++.|++.+.+++..+++++.++||+|.++|+.|+|||.+|+++|+||++||.+++.|+.+.+|.++++++++|+.+|+|+
T Consensus 5 v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~ 84 (145)
T 4eoz_A 5 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFI 84 (145)
T ss_dssp CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhh
Confidence 35666789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhHHHHHHHHHhcCChHHHH
Q 020253 222 YGNIEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLERLQNAYLYQLPKLKS 283 (328)
Q Consensus 222 Y~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~ 283 (328)
|++..... .+++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|++|++.+|++
T Consensus 85 Y~~~~~~~-~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 85 YTGKAPNL-DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHSCCTTG-GGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred ccCccCCc-HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 98743322 37899999999999999999999999999999999999999999999999874
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.92 E-value=3.6e-25 Score=170.64 Aligned_cols=111 Identities=24% Similarity=0.357 Sum_probs=99.1
Q ss_pred ChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCC
Q 020253 145 SNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGN 224 (328)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~ 224 (328)
+++.+.+.+.++++++.++||+|.++|++|+|||.+|+++|+||++||.+++.|+....|.++++++++|+.+|+|+||+
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~ 87 (120)
T 2if5_A 8 HSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTA 87 (120)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred c-cccccHHHHHHHHHhccccChHhHHHHHHHHH
Q 020253 225 I-EHEEFLTHRLALLRAADKYDICDLKEACHDSL 257 (328)
Q Consensus 225 ~-~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 257 (328)
. ..+. +++.+++.+|++|+++.|++.|+++|
T Consensus 88 ~~~~~~--~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 88 TLTVST--ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCCCG--GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 4 3333 78999999999999999999999987
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.92 E-value=1e-24 Score=169.72 Aligned_cols=114 Identities=26% Similarity=0.476 Sum_probs=105.1
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEc-CCCCHHHHHHHhhhhc
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDI-PDMSIDACQAFLSYIY 222 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l-~~~~~~~f~~ll~~iY 222 (328)
.+++.+.+.+..++.++.++||+|.++|+.|+|||.+|+++|+||++||.+++.| ....|.| +++++++|+.+|+|+|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Y 89 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMY 89 (127)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHc
Confidence 4467889999999999999999999999999999999999999999999999998 7889999 9999999999999999
Q ss_pred CC-ccccccHHHHHHHHHhccccChHhHHHHHHHHHHhc
Q 020253 223 GN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 260 (328)
Q Consensus 223 ~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 260 (328)
|+ ...+. +++.+++.+|++|+++.|++.|+++|.++
T Consensus 90 tg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 90 TSRLNLRE--GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 87 33443 88999999999999999999999999864
No 8
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.91 E-value=9.5e-25 Score=172.39 Aligned_cols=119 Identities=18% Similarity=0.296 Sum_probs=107.6
Q ss_pred cCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcC-CCCHHHHHHHhhhh
Q 020253 143 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP-DMSIDACQAFLSYI 221 (328)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~-~~~~~~f~~ll~~i 221 (328)
..+++.+.+.+.++++++.++||+|.++|++|+|||.||+++|+||++||.+++.+. ..|.++ ++++++|+.+|+|+
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~ 94 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFA 94 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHh
Confidence 455778999999999999999999999999999999999999999999999988763 588995 99999999999999
Q ss_pred cCC-ccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhh
Q 020253 222 YGN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKN 265 (328)
Q Consensus 222 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~ 265 (328)
||+ ...+. +++.+++.+|++|+++.|++.|+++|.+.++..|
T Consensus 95 Ytg~~~i~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 95 YTAKLILSK--DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred cCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 987 33443 7899999999999999999999999999987765
No 9
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.91 E-value=1.7e-24 Score=172.02 Aligned_cols=113 Identities=22% Similarity=0.311 Sum_probs=98.3
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccc--cCcceEEcCCCCHHHHHHHhhhh
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKE--KELSTIDIPDMSIDACQAFLSYI 221 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e--~~~~~v~l~~~~~~~f~~ll~~i 221 (328)
.++..+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.+ +...+|.|+++++++|+.+|+|+
T Consensus 29 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fi 108 (144)
T 2ppi_A 29 QHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYI 108 (144)
T ss_dssp THHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999999999999999988765 67789999999999999999999
Q ss_pred cCCc-cccccHHHHHHHHHhccccChHhHHHHHHHHHH
Q 020253 222 YGNI-EHEEFLTHRLALLRAADKYDICDLKEACHDSLV 258 (328)
Q Consensus 222 Y~~~-~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 258 (328)
|++. ..+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 109 Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 109 FSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp TTSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred hCCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 9874 3333 889999999999999999999998863
No 10
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.90 E-value=2.6e-24 Score=162.94 Aligned_cols=103 Identities=36% Similarity=0.506 Sum_probs=89.2
Q ss_pred HhcCCCcccEEEEeCC----eEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCC-cccccc
Q 020253 156 MLTEGIHTDIIINASN----GSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGN-IEHEEF 230 (328)
Q Consensus 156 ~~~~~~~~Dv~l~v~~----~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~-~~~~~~ 230 (328)
+++++.++||+|.++| +.|+|||.+|+++||||++||.+++.|+. .+|.++++++++|+.+|+|+||+ ...+.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~- 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA- 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT-
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH-
Confidence 4678899999999998 89999999999999999999999999998 99999999999999999999987 33443
Q ss_pred HHHHHHHHHhccccChHhHHHHHHHHHHhcC
Q 020253 231 LTHRLALLRAADKYDICDLKEACHDSLVEDI 261 (328)
Q Consensus 231 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 261 (328)
+++.+++.+|++|+++.|++.|+++|.+++
T Consensus 80 -~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 -DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp -TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 789999999999999999999999998763
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=166.91 Aligned_cols=110 Identities=19% Similarity=0.249 Sum_probs=98.3
Q ss_pred ChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCC
Q 020253 145 SNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGN 224 (328)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~ 224 (328)
+++.+.+.+.++++++.++||+|.++|++|+|||.+|+++||||++||.+++ +.+|.|+++++++|+.+|+|+||+
T Consensus 7 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 7 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCC
Confidence 4567889999999999999999999999999999999999999999998865 578999999999999999999987
Q ss_pred c-cccccHHHHHHHHHhccccChHhHHHHHHHHHHhc
Q 020253 225 I-EHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 260 (328)
Q Consensus 225 ~-~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 260 (328)
. ..+. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 83 ~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 83 HLALTS--GNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCccCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 3 3443 78999999999999999999999998764
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.90 E-value=7.6e-24 Score=163.35 Aligned_cols=110 Identities=25% Similarity=0.314 Sum_probs=99.8
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcC
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYG 223 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~ 223 (328)
.+++.+.+.+.++++++.++||+|.++|++|+|||.+|+++||||++||.++ +.+|.++++++++|+.+|+|+||
T Consensus 10 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Yt 84 (121)
T 1buo_A 10 SHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYT 84 (121)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcC
Confidence 3466888999999999999999999999999999999999999999999863 56899999999999999999998
Q ss_pred Cc-cccccHHHHHHHHHhccccChHhHHHHHHHHHHhc
Q 020253 224 NI-EHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 260 (328)
Q Consensus 224 ~~-~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 260 (328)
+. ..+. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 85 g~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 85 ATLQAKA--EDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp SCCCCCG--GGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 74 3333 88999999999999999999999999864
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.90 E-value=6.2e-24 Score=162.67 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=98.0
Q ss_pred ChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcC--CCCHHHHHHHhhhhc
Q 020253 145 SNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP--DMSIDACQAFLSYIY 222 (328)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~--~~~~~~f~~ll~~iY 222 (328)
+++.+.+.+.++++++.++||+|.++|++|+|||.+|+++|+||++||.++ .+..|.|+ ++++++|+.+|+|+|
T Consensus 5 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Y 80 (116)
T 2vpk_A 5 HCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHc
Confidence 456788999999999999999999999999999999999999999999886 35678888 999999999999999
Q ss_pred CC-ccccccHHHHHHHHHhccccChHhHHHHHHHHHH
Q 020253 223 GN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLV 258 (328)
Q Consensus 223 ~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 258 (328)
|+ ...+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 81 t~~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 81 TGTLNLDS--WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 87 33433 789999999999999999999999985
No 14
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.90 E-value=2.5e-24 Score=169.20 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=97.5
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcC
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYG 223 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~ 223 (328)
.+...+.+.+.++++++.++||+|.++|++|+|||.||+++|+||++||.+++ +.+|.|+++++++|+.+|+|+|+
T Consensus 7 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYt 82 (135)
T 2yy9_A 7 GHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYT 82 (135)
T ss_dssp CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhC
Confidence 34568889999999999999999999999999999999999999999999875 57899999999999999999998
Q ss_pred C-ccccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChh
Q 020253 224 N-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTK 264 (328)
Q Consensus 224 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~ 264 (328)
+ ...+. +++.+++.+|++|+++.|++.|+++|.+.+...
T Consensus 83 g~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 83 GHLALTS--GNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 7 43444 789999999999999999999999998876443
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.89 E-value=2e-24 Score=167.62 Aligned_cols=111 Identities=21% Similarity=0.293 Sum_probs=100.5
Q ss_pred cCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCC-CCHHHHHHHhhhh
Q 020253 143 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPD-MSIDACQAFLSYI 221 (328)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~-~~~~~f~~ll~~i 221 (328)
..+++.+.+.+.++++++.++||+|.++|+.|+|||.+|+++|+||++||.+++.| ...|.+++ +++++|+.+|+|+
T Consensus 13 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~i 90 (125)
T 3ohu_A 13 TVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFA 90 (125)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhH
Confidence 44567889999999999999999999999999999999999999999999998876 67899998 9999999999999
Q ss_pred cCCc-cccccHHHHHHHHHhccccChHhHHHHHHHHH
Q 020253 222 YGNI-EHEEFLTHRLALLRAADKYDICDLKEACHDSL 257 (328)
Q Consensus 222 Y~~~-~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 257 (328)
||+. ..+. +++.+++.+|++|+++.|++.|++||
T Consensus 91 Ytg~~~~~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 91 YTAKLLLSR--ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp TTSEEEECT--TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred cCCceEECH--HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9983 3433 78999999999999999999998764
No 16
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.89 E-value=6e-24 Score=165.84 Aligned_cols=111 Identities=23% Similarity=0.349 Sum_probs=93.8
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcC-CCCHHHHHHHhhhhc
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP-DMSIDACQAFLSYIY 222 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~-~~~~~~f~~ll~~iY 222 (328)
.++..+.+.+.++++++.++||+|.++|+.|+|||.+|+++|+||++||.++ ...+|.|+ ++++++|+.+|+|+|
T Consensus 15 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iY 90 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCY 90 (129)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHh
Confidence 3456788999999999999999999999999999999999999999999875 66799997 999999999999999
Q ss_pred CC-ccccccHHHHHHHHHhccccChHhHHHHHHHHHHhc
Q 020253 223 GN-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVED 260 (328)
Q Consensus 223 ~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 260 (328)
++ ...+. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 91 tg~~~i~~--~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 91 TGRLSMNV--GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HSEEECCT--TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred CCccccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 87 33433 78999999999999999999999999875
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.89 E-value=4e-24 Score=165.64 Aligned_cols=112 Identities=19% Similarity=0.307 Sum_probs=97.9
Q ss_pred cCChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcC-CCCHHHHHHHhhhh
Q 020253 143 KRSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIP-DMSIDACQAFLSYI 221 (328)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~-~~~~~~f~~ll~~i 221 (328)
+.+++.+.+.+.++++++.++||+|.++|++|+|||.+||++|+||++||.+++.|+ ..|.++ ++++++|+.+|+|+
T Consensus 10 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~i 87 (124)
T 2ihc_A 10 SVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFA 87 (124)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHh
Confidence 345678899999999999999999999999999999999999999999999988764 578894 99999999999999
Q ss_pred cCCc-cccccHHHHHHHHHhccccChHhHHHHHHHHHH
Q 020253 222 YGNI-EHEEFLTHRLALLRAADKYDICDLKEACHDSLV 258 (328)
Q Consensus 222 Y~~~-~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 258 (328)
||+. ..+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 88 Ytg~~~i~~--~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 88 YTAKLILSK--ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHSEEEEET--TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCCCcccCH--HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9883 3333 789999999999999999999998864
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.89 E-value=1.4e-23 Score=161.43 Aligned_cols=108 Identities=20% Similarity=0.272 Sum_probs=97.2
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcC
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYG 223 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~ 223 (328)
.+++.+.+.+.++++++.++||+|.++|++|+|||.+|+++|+||++||.+ .+.+|.++++++++|+.+|+|+||
T Consensus 9 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Yt 83 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYT 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcC
Confidence 345678899999999999999999999999999999999999999999976 345788999999999999999998
Q ss_pred C-ccccccHHHHHHHHHhccccChHhHHHHHHHHHH
Q 020253 224 N-IEHEEFLTHRLALLRAADKYDICDLKEACHDSLV 258 (328)
Q Consensus 224 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 258 (328)
+ ...+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 84 g~~~i~~--~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 84 AKLSLSP--ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 7 33443 789999999999999999999999975
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.86 E-value=4.2e-22 Score=152.72 Aligned_cols=102 Identities=20% Similarity=0.198 Sum_probs=87.8
Q ss_pred ChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCC
Q 020253 145 SNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGN 224 (328)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~ 224 (328)
++..+++.+. ..++.++||+|.++|+.|+|||.+||++|+||++ .+.+|.++++++++|+.+|+|+||+
T Consensus 15 ~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg 83 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGE 83 (119)
T ss_dssp TTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTC
T ss_pred chHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCC
Confidence 4456677775 4678899999999999999999999999999974 3568999999999999999999987
Q ss_pred -ccccccHHHHHHHHHhccccChHhHHHHHHHHHHh
Q 020253 225 -IEHEEFLTHRLALLRAADKYDICDLKEACHDSLVE 259 (328)
Q Consensus 225 -~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 259 (328)
...+. +++.+++.+|++|+++.|++.|++++.+
T Consensus 84 ~~~i~~--~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 84 SVELQP--GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp CEEECG--GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 44444 8899999999999999999999998765
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.85 E-value=2.4e-21 Score=148.04 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=92.3
Q ss_pred CChhHHHHHHHHHhcCCCcccEEEEeCCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcC
Q 020253 144 RSNATALASLGRMLTEGIHTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYG 223 (328)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~ 223 (328)
.+++.+.+.+.+++.++.++||+|.++|+.|+|||.+||++|+||++||.++ +.+|.++++++++|+.+|+|+||
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Yt 87 (116)
T 3fkc_A 13 QYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYS 87 (116)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcC
Confidence 3467788999999999999999999999999999999999999999999875 56899999999999999999999
Q ss_pred CccccccHHHHHHHHHhccccChHhHHH
Q 020253 224 NIEHEEFLTHRLALLRAADKYDICDLKE 251 (328)
Q Consensus 224 ~~~~~~~~~~~~~ll~~A~~~~~~~l~~ 251 (328)
+.......+++.+++.+|++|+++.|++
T Consensus 88 g~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 88 SKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp SCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred CCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 8543233489999999999999999874
No 21
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.79 E-value=3.7e-19 Score=141.39 Aligned_cols=112 Identities=15% Similarity=0.245 Sum_probs=84.6
Q ss_pred eccceeEEEEEccCCC-----CceeecCCceecCe---eEEEEEEeCC-----ceEEEEeecccccCCCCCcEEEEEEEE
Q 020253 9 DTTSRLAQWRIDNLAS-----CSYRKSDPFKIGKW---NWHLSLEKNR-----MLFVKLYPEVSNLTRDNPPIASFIIRV 75 (328)
Q Consensus 9 ~~~~~~~~w~I~~~~~-----g~~~~S~~F~vgg~---~W~l~~yp~g-----~~~vsL~~~~~~~~~~w~v~a~f~~~l 75 (328)
++++++|.|+|+||+. |+++.|++|.+||| +|+|++||+| ..++||||...+. ..|++.|+|+|+|
T Consensus 7 ~~~~~~~~w~I~~fs~~~~~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~-~~w~v~a~f~l~l 85 (145)
T 3ivv_A 7 KVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC-PKSEVRAKFKFSI 85 (145)
T ss_dssp CCCEEEEEEEESSGGGCCCCTTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEEC-SSSEEEEEEEEEE
T ss_pred cEEEEEEEEEEcCchHHhhcCCCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCCeEEEEEEEcCC-CCCcEEEEEEEEE
Confidence 5689999999999974 56899999999996 9999999999 3578888877554 5799999999999
Q ss_pred EecCCCCccccCccccccccccCCceeee-e-----------eceeccceeeeeeeeee
Q 020253 76 VSSVGDRKALSHPEITDRQLKNNDDFVWA-I-----------EVPLTGKFIIDVEFLDL 122 (328)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wg-~-----------~~~~~~~l~ve~~v~~~ 122 (328)
+|+.++........ ....|....+|||. + +|++||+++|+|+|.++
T Consensus 86 lnq~~~~~~~~~~~-~~~~F~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~ 143 (145)
T 3ivv_A 86 LNAKGEETKAMESQ-RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVV 143 (145)
T ss_dssp ECTTSCEEEEEECS-SCEEEETTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEEC
T ss_pred EecCCCceeeeccc-ceEEecCCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEE
Confidence 99998764321111 11223333444443 1 38899999999999654
No 22
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.77 E-value=2e-18 Score=138.80 Aligned_cols=117 Identities=12% Similarity=0.192 Sum_probs=84.3
Q ss_pred ccceeEEEEEccCCC-CceeecCCceecCeeEEEEEEeCC------ceEEEEeeccccc--CCCCCcEEEEEEEEEecCC
Q 020253 10 TTSRLAQWRIDNLAS-CSYRKSDPFKIGKWNWHLSLEKNR------MLFVKLYPEVSNL--TRDNPPIASFIIRVVSSVG 80 (328)
Q Consensus 10 ~~~~~~~w~I~~~~~-g~~~~S~~F~vgg~~W~l~~yp~g------~~~vsL~~~~~~~--~~~w~v~a~f~~~l~~~~~ 80 (328)
...++|.|+|+||+. .+.+.|++|.+||++|+|++||+| ..+++|||..... +.+|++.|+|+++|+|+.+
T Consensus 16 ~~~~~~~w~I~nfS~~~~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~~~~~ 95 (155)
T 2foj_A 16 RSEATFQFTVERFSRLSESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRD 95 (155)
T ss_dssp CSEEEEEEEESSGGGCCSCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEECCSSC
T ss_pred CCCcEEEEEECChhhcCCceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEEcCCC
Confidence 457999999999986 467999999999999999999986 2467777765333 3569999999999999988
Q ss_pred CCccccCccccccccccCCceeee-e-----------eceeccceeeeeeeeeeeeecCCCC
Q 020253 81 DRKALSHPEITDRQLKNNDDFVWA-I-----------EVPLTGKFIIDVEFLDLKIAPSDGG 130 (328)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~wg-~-----------~~~~~~~l~ve~~v~~~~i~~~~~~ 130 (328)
+..+..+. ....|.....+|||. + +|++||+++|+|+| ++..+.|.
T Consensus 96 ~~~~~~~~-~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V---~V~~~tG~ 153 (155)
T 2foj_A 96 DEKSFSRR-ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFV---QADAPHGV 153 (155)
T ss_dssp GGGCEEEE-EEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEE---EECCCBSS
T ss_pred CcceEEec-cEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEE---EEeCcccc
Confidence 65332222 122232223444443 1 38899999999999 55555553
No 23
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.74 E-value=5.6e-18 Score=139.08 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=82.1
Q ss_pred eeccceeEEEEEccCCC-------C--ceeecCCceec--CeeEEEEEEeCCc-----eEEEEeecccccC----CCCCc
Q 020253 8 VDTTSRLAQWRIDNLAS-------C--SYRKSDPFKIG--KWNWHLSLEKNRM-----LFVKLYPEVSNLT----RDNPP 67 (328)
Q Consensus 8 ~~~~~~~~~w~I~~~~~-------g--~~~~S~~F~vg--g~~W~l~~yp~g~-----~~vsL~~~~~~~~----~~w~v 67 (328)
..+++|+|.|+|+||+. | .++.|++|.+| ||+|+|++||+|. .++|||+.+.+.. ..|++
T Consensus 19 ~~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~v 98 (178)
T 4gjh_A 19 GACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPF 98 (178)
T ss_dssp HCCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSSC
T ss_pred CcccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCCCCCCEEEEEEEEecCCCCcccCCce
Confidence 35788999999999862 3 37999999999 9999999999993 5788888774432 47999
Q ss_pred EEEEEEEEEecCCCCccccCc---ccccccccc---CCceeeee--------------eceeccceeeeeeee
Q 020253 68 IASFIIRVVSSVGDRKALSHP---EITDRQLKN---NDDFVWAI--------------EVPLTGKFIIDVEFL 120 (328)
Q Consensus 68 ~a~f~~~l~~~~~~~~~~~~~---~~~~~~~~~---~~~~~wg~--------------~~~~~~~l~ve~~v~ 120 (328)
.|+|+|+|+|+.++....... ......|.. ..+.+||+ +|++||+++|+|+|.
T Consensus 99 ~a~~~l~Lldq~~~~~~~~~~~~~~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~ 171 (178)
T 4gjh_A 99 RQRVTLMLLDQSGKKNHIVETFKADPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVD 171 (178)
T ss_dssp CCEEEEEECCTTSSCCCEEEEEECCTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEEC
T ss_pred EEEEEEEEEcCCCCcceeEEeeccCCccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEE
Confidence 999999999998865333210 000112221 11234553 388999999999993
No 24
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.72 E-value=1.9e-17 Score=133.66 Aligned_cols=113 Identities=9% Similarity=0.092 Sum_probs=79.9
Q ss_pred ccceeEEEEEccCC-------CCc--eeecCCceec--CeeEEEEEEeCC------ceEEEEeeccccc----CCCCCcE
Q 020253 10 TTSRLAQWRIDNLA-------SCS--YRKSDPFKIG--KWNWHLSLEKNR------MLFVKLYPEVSNL----TRDNPPI 68 (328)
Q Consensus 10 ~~~~~~~w~I~~~~-------~g~--~~~S~~F~vg--g~~W~l~~yp~g------~~~vsL~~~~~~~----~~~w~v~ 68 (328)
+.+|+|.|+|+||+ .|+ .+.|++|.+| ||+|+|++||+| ..++|||+.+.+. ...|++.
T Consensus 2 ~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~ 81 (160)
T 1lb6_A 2 QCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQ 81 (160)
T ss_dssp CCCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCcee
Confidence 35799999999986 355 8999999999 999999999998 2479999877432 2359999
Q ss_pred EEEEEEEEecCCCCcccc--C----cccccccccc---CCceeeee------------eceeccceeeeeeeeee
Q 020253 69 ASFIIRVVSSVGDRKALS--H----PEITDRQLKN---NDDFVWAI------------EVPLTGKFIIDVEFLDL 122 (328)
Q Consensus 69 a~f~~~l~~~~~~~~~~~--~----~~~~~~~~~~---~~~~~wg~------------~~~~~~~l~ve~~v~~~ 122 (328)
|+|+|+|+|+.+...... . ......+.+. ....+||+ +|+.||+++|+|+|.++
T Consensus 82 a~~~l~lldq~~~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~ 156 (160)
T 1lb6_A 82 GTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTR 156 (160)
T ss_dssp SEEEEEECCCSCTTSCCCEEEEEECCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC-
T ss_pred eeEEEEEEcCCCccccccceEEeecCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEe
Confidence 999999999987531110 0 0001111111 12235664 38899999999999543
No 25
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.72 E-value=9.4e-18 Score=139.62 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=83.0
Q ss_pred eccceeEEEEEccCC---------CCceeecCCceec--CeeEEEEEEeCCc-----eEEEEeeccccc----CCCCCcE
Q 020253 9 DTTSRLAQWRIDNLA---------SCSYRKSDPFKIG--KWNWHLSLEKNRM-----LFVKLYPEVSNL----TRDNPPI 68 (328)
Q Consensus 9 ~~~~~~~~w~I~~~~---------~g~~~~S~~F~vg--g~~W~l~~yp~g~-----~~vsL~~~~~~~----~~~w~v~ 68 (328)
.+.+|+|.|+|+||+ .|+++.|++|.+| ||+|+|++||+|. .+||||+.+.+. ...|++.
T Consensus 36 ~~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~~lSlyL~l~~g~~D~~l~wp~~ 115 (198)
T 4ghu_A 36 ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFK 115 (198)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred cccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCCCCCCeEEEEEEecCCccCCCCCceEE
Confidence 467899999999986 2478999999999 9999999999993 479999887532 3479999
Q ss_pred EEEEEEEEecCCCCccccC-------ccccccccccCCceeeee------------eceeccceeeeeeeee
Q 020253 69 ASFIIRVVSSVGDRKALSH-------PEITDRQLKNNDDFVWAI------------EVPLTGKFIIDVEFLD 121 (328)
Q Consensus 69 a~f~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~wg~------------~~~~~~~l~ve~~v~~ 121 (328)
|+|+|+|+|+.+++..... ...+.+.+. ..+.+||+ +|+.||+++|+|+|.+
T Consensus 116 a~~~l~Lldq~~~~~~~~~~~~~~~~~~~f~rp~~-~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v 186 (198)
T 4ghu_A 116 QKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTG-EMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDT 186 (198)
T ss_dssp CCEEEEECCCSTTCCCEEEEECCCTTSGGGSCCSS-SBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECC
T ss_pred EEEEEEEEcCCCCccceEEEeecCcccceecCCcc-cCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEe
Confidence 9999999999876432211 011222222 12334664 3899999999999943
No 26
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.69 E-value=1.5e-17 Score=138.03 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=81.2
Q ss_pred ccceeEEEEEccCCC-------Cc--eeecCCceec--CeeEEEEEEeCCc-----eEEEEeeccccc----CCCCCcEE
Q 020253 10 TTSRLAQWRIDNLAS-------CS--YRKSDPFKIG--KWNWHLSLEKNRM-----LFVKLYPEVSNL----TRDNPPIA 69 (328)
Q Consensus 10 ~~~~~~~w~I~~~~~-------g~--~~~S~~F~vg--g~~W~l~~yp~g~-----~~vsL~~~~~~~----~~~w~v~a 69 (328)
.++|+|.|+|+||+. |+ .+.|++|.+| ||+|+|++||+|. .++|||+.+.+. ...|++.|
T Consensus 37 ~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CCSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCCCCCCEEEEEEEEecCCCCccCCCcEEE
Confidence 478999999999963 44 5999999999 9999999999993 479999887432 23699999
Q ss_pred EEEEEEEecCCCCccccCc----ccccccccc--CCceeeee------------eceeccceeeeeeeee
Q 020253 70 SFIIRVVSSVGDRKALSHP----EITDRQLKN--NDDFVWAI------------EVPLTGKFIIDVEFLD 121 (328)
Q Consensus 70 ~f~~~l~~~~~~~~~~~~~----~~~~~~~~~--~~~~~wg~------------~~~~~~~l~ve~~v~~ 121 (328)
+|+|+|+|+.+.+...... .....|.+. ..+.+||+ +|+.||+++|+|+|.+
T Consensus 117 ~~~l~lldq~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v 186 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDT 186 (192)
T ss_dssp CEEEEECCCSTTCCCEEEEECCCTTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECC
T ss_pred EEEEEEECCCCCccceEEEEecCCCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEc
Confidence 9999999999875332111 011112111 11234554 3889999999999943
No 27
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.68 E-value=4.9e-17 Score=135.22 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=80.6
Q ss_pred ccceeEEEEEccCCC-------Cc--eeecCCcee--cCeeEEEEEEeCCc-----eEEEEeecccccC----CCCCcEE
Q 020253 10 TTSRLAQWRIDNLAS-------CS--YRKSDPFKI--GKWNWHLSLEKNRM-----LFVKLYPEVSNLT----RDNPPIA 69 (328)
Q Consensus 10 ~~~~~~~w~I~~~~~-------g~--~~~S~~F~v--gg~~W~l~~yp~g~-----~~vsL~~~~~~~~----~~w~v~a 69 (328)
...|+|.|+|+||+. |+ ++.|++|.+ |||+|+|++||+|. .++|||+.+.+.. ..|++.|
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~W~~~a 119 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 119 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCCCCCCEEEEEEEEccCCCCCcCCCceEE
Confidence 578999999999963 44 599999999 99999999999993 5788888764431 5799999
Q ss_pred EEEEEEEecCCCCccc---cC---ccccccccc-cCCceeee-e----------eceeccceeeeeeeee
Q 020253 70 SFIIRVVSSVGDRKAL---SH---PEITDRQLK-NNDDFVWA-I----------EVPLTGKFIIDVEFLD 121 (328)
Q Consensus 70 ~f~~~l~~~~~~~~~~---~~---~~~~~~~~~-~~~~~~wg-~----------~~~~~~~l~ve~~v~~ 121 (328)
+|+|+|+|+.+..... .. ...|.++.. ...+|||. | +|++||+++|+|+|.+
T Consensus 120 ~~~l~lldq~~~~~~~~~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V 189 (192)
T 1ca9_A 120 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDL 189 (192)
T ss_dssp CEEEEECCTTSSCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECC
T ss_pred EEEEEEECCCCCceeeEeeccCCchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEe
Confidence 9999999998874211 11 001221111 12344443 1 2889999999999944
No 28
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.67 E-value=7.3e-17 Score=131.36 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=80.1
Q ss_pred eccceeEEEEEccCCC-------Cc--eeecCCce--ecCeeEEEEEEeCCc-----eEEEEeeccccc--C--CCCCcE
Q 020253 9 DTTSRLAQWRIDNLAS-------CS--YRKSDPFK--IGKWNWHLSLEKNRM-----LFVKLYPEVSNL--T--RDNPPI 68 (328)
Q Consensus 9 ~~~~~~~~w~I~~~~~-------g~--~~~S~~F~--vgg~~W~l~~yp~g~-----~~vsL~~~~~~~--~--~~w~v~ 68 (328)
..++|+|.|+|+||+. |+ .+.|++|. +||++|+|++||+|. .+++||+.+.+. . ..|++.
T Consensus 15 ~~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~w~~~ 94 (168)
T 1d00_A 15 STYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 94 (168)
T ss_dssp CCSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred cccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCCCCCcEEEEEEEEecCCCCccCCCceE
Confidence 3578999999999963 44 39999995 899999999999983 578888876442 1 479999
Q ss_pred EEEEEEEEecCCCCccccCcc-c--cccccc----cCCceeee-e----------eceeccceeeeeeeee
Q 020253 69 ASFIIRVVSSVGDRKALSHPE-I--TDRQLK----NNDDFVWA-I----------EVPLTGKFIIDVEFLD 121 (328)
Q Consensus 69 a~f~~~l~~~~~~~~~~~~~~-~--~~~~~~----~~~~~~wg-~----------~~~~~~~l~ve~~v~~ 121 (328)
|+|+|+|+|+.+......... . ...+.+ ...+|||. + +|++||+++|+|+|.+
T Consensus 95 ~~~~l~ll~q~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v 165 (168)
T 1d00_A 95 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDL 165 (168)
T ss_dssp CCEEEEECCTTSSCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECC
T ss_pred EEEEEEEECCCCCccceeccccCcchhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEe
Confidence 999999999998652211100 0 111211 12344444 1 4889999999999943
No 29
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.66 E-value=6.6e-17 Score=137.74 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=81.6
Q ss_pred ccceeEEEEEccCCC-------C--ceeecCCceec--CeeEEEEEEeCCc-----eEEEEeeccccc----CCCCCcEE
Q 020253 10 TTSRLAQWRIDNLAS-------C--SYRKSDPFKIG--KWNWHLSLEKNRM-----LFVKLYPEVSNL----TRDNPPIA 69 (328)
Q Consensus 10 ~~~~~~~w~I~~~~~-------g--~~~~S~~F~vg--g~~W~l~~yp~g~-----~~vsL~~~~~~~----~~~w~v~a 69 (328)
+..|+|.|+|+||+. | +.+.|++|.+| ||+|+|++||+|. .++|||+.+.+. ...|++.|
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~Wp~~a 152 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 152 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGGGTTTEEEEEECCBCCTTTTSSCSSCCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCCCCCCEEEEEEEEecCCccccCCCcEEE
Confidence 578999999999963 3 37999999999 9999999999993 589999987532 23699999
Q ss_pred EEEEEEEecCCCCccccC----c---cccccccccCCceeeee------------eceeccceeeeeeeee
Q 020253 70 SFIIRVVSSVGDRKALSH----P---EITDRQLKNNDDFVWAI------------EVPLTGKFIIDVEFLD 121 (328)
Q Consensus 70 ~f~~~l~~~~~~~~~~~~----~---~~~~~~~~~~~~~~wg~------------~~~~~~~l~ve~~v~~ 121 (328)
+|+|+|+|+.+.+..... . ..|.+... ..+.+||+ +|+.||+++|+|+|.+
T Consensus 153 ~~~l~lldq~~~~~~~~~~~~~~~~~~~F~rp~~-~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v 222 (228)
T 1flk_A 153 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTG-EMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDT 222 (228)
T ss_dssp CEEEEECCCSSSCCCEEEEECCCTTCTTSSSCSS-SBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCC
T ss_pred EEEEEEEcCCCCccceeeeecCCCccccccCCcc-CCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEc
Confidence 999999999887532211 0 01221111 11234553 3889999999999944
No 30
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.53 E-value=2.4e-14 Score=136.99 Aligned_cols=111 Identities=12% Similarity=0.177 Sum_probs=80.7
Q ss_pred ccceeEEEEEccCCCC-ceeecCCceecCeeEEEEEEeCCc------eEEEEeecccc--cCCCCCcEEEEEEEEEecCC
Q 020253 10 TTSRLAQWRIDNLASC-SYRKSDPFKIGKWNWHLSLEKNRM------LFVKLYPEVSN--LTRDNPPIASFIIRVVSSVG 80 (328)
Q Consensus 10 ~~~~~~~w~I~~~~~g-~~~~S~~F~vgg~~W~l~~yp~g~------~~vsL~~~~~~--~~~~w~v~a~f~~~l~~~~~ 80 (328)
...++|+|+|+||+.. +.++|++|.+||++|+|.+||+|. .++|+||...+ .+.+|.+.|+|+++++|+.+
T Consensus 28 ~~~~~~~w~I~nfS~~~~~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l~n~~~ 107 (522)
T 2f1z_A 28 RSEATFQFTVERFSRLSESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRD 107 (522)
T ss_dssp CSEEEEEEEESSCTTCCSCEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEECCTTC
T ss_pred cCCcEEEEEECChhhcCCceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEEEcCCC
Confidence 5689999999999863 379999999999999999999872 35666666533 35679999999999999887
Q ss_pred CCccccCccccccccccCCceeee-e-----------eceeccceeeeeeeee
Q 020253 81 DRKALSHPEITDRQLKNNDDFVWA-I-----------EVPLTGKFIIDVEFLD 121 (328)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~wg-~-----------~~~~~~~l~ve~~v~~ 121 (328)
...+..+. ...+|.....+|||. + +|++||+++|+|+|.+
T Consensus 108 ~~~~~~~~-~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v 159 (522)
T 2f1z_A 108 DEKSFSRR-ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 159 (522)
T ss_dssp GGGCEEEE-CCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEE
T ss_pred Cccceecc-ceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeec
Confidence 65433322 122333323444443 1 3889999999999944
No 31
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.45 E-value=2.6e-13 Score=108.89 Aligned_cols=101 Identities=14% Similarity=0.188 Sum_probs=80.3
Q ss_pred EEEEe-CCeEEehhHHHHhccCHHHHHhccC-ccc-ccCcceEEcCCCCHHHHHHHhhhhcCCc--c-------------
Q 020253 165 IIINA-SNGSTGAHRAVLAARSPVFRSMFSH-DLK-EKELSTIDIPDMSIDACQAFLSYIYGNI--E------------- 226 (328)
Q Consensus 165 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~-~~~-e~~~~~v~l~~~~~~~f~~ll~~iY~~~--~------------- 226 (328)
|+|+. +|+.|.|||.+ |+.|+||++||.+ ++. |+.+..|.|+++++.+++.+++|+|+.. .
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 77775 78899999998 8999999999987 666 7777899999999999999999999542 0
Q ss_pred ----------ccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhH
Q 020253 227 ----------HEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNV 266 (328)
Q Consensus 227 ----------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~ 266 (328)
.....+++.+|+.+|++++++.|.+.|++++...+...++
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~ 131 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTP 131 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCH
Confidence 1223478899999999999999999999999776654444
No 32
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.25 E-value=1.4e-11 Score=90.22 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=61.2
Q ss_pred EEEEe-CCeEEehhHHHHhccCHHHHHhccC--cccccCcceEEcCCCCHHHHHHHhhhhc-----C----Ccc---ccc
Q 020253 165 IIINA-SNGSTGAHRAVLAARSPVFRSMFSH--DLKEKELSTIDIPDMSIDACQAFLSYIY-----G----NIE---HEE 229 (328)
Q Consensus 165 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~--~~~e~~~~~v~l~~~~~~~f~~ll~~iY-----~----~~~---~~~ 229 (328)
|+|+. +|+.|.|||.+ |+.|++|++||.+ ++.|+....|.|+++++..++.+++|+| + ++. .+.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 56665 67899999999 9999999999987 6778888999999999999999999999 4 222 333
Q ss_pred cHHHHHHHHHhccccCh
Q 020253 230 FLTHRLALLRAADKYDI 246 (328)
Q Consensus 230 ~~~~~~~ll~~A~~~~~ 246 (328)
+++.+|+.+|+.+++
T Consensus 83 --~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 --EIALELLMAANFLDC 97 (97)
T ss_dssp --GGHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHhhhCC
Confidence 789999999998863
No 33
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.04 E-value=3.4e-10 Score=88.62 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=78.2
Q ss_pred EEEEe-CCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCCc--c---------------
Q 020253 165 IIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNI--E--------------- 226 (328)
Q Consensus 165 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~~--~--------------- 226 (328)
|+|+. +|+.|.+|+.+ |..|+++++||...- .+.|.|++++...++.+++|+|... .
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 67777 67899999997 889999999997531 4689999999999999999998421 1
Q ss_pred --------ccccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhHHH
Q 020253 227 --------HEEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNVLE 268 (328)
Q Consensus 227 --------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~~ 268 (328)
.....+++.+|+.+|++++++.|.+.|++++...+...++-+
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 111236788888889999998888888888888765555433
No 34
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.96 E-value=2e-10 Score=92.02 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=56.7
Q ss_pred EEEEe-CCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCCccc----------------
Q 020253 165 IIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNIEH---------------- 227 (328)
Q Consensus 165 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~---------------- 227 (328)
|+|+. +|+.|.+|+.+ |..|++|++||.... ..+.|.|+++++..++.+++|+|.....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 66765 68899999998 889999999997642 3458999999999999999999964210
Q ss_pred ----------cccHHHHHHHHHhccccChHhHHHHHHHHHHhcCC---hhhHHHHHHH
Q 020253 228 ----------EEFLTHRLALLRAADKYDICDLKEACHDSLVEDID---TKNVLERLQN 272 (328)
Q Consensus 228 ----------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~~~~~~l~~ 272 (328)
.....++.+|+.+|++++++.|.++|++++...+. ++.+..++.+
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I 139 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNI 139 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTC
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 11236788999999999999999999999999884 4444444433
No 35
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.49 E-value=2e-07 Score=68.03 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=63.2
Q ss_pred cEEEEe-CCeEEehhHHHHhccCHHHHHhccCcccccCcceEEcCCCCHHHHHHHhhhhcCCc---c----------ccc
Q 020253 164 DIIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLKEKELSTIDIPDMSIDACQAFLSYIYGNI---E----------HEE 229 (328)
Q Consensus 164 Dv~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~~---~----------~~~ 229 (328)
-|+|+. +|+.|.+++.+ |.+|.+++.|+..++ +...+.|+|++++...++.+++|+|... . ...
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 367777 78899999996 889999999998766 6666789999999999999999998421 0 011
Q ss_pred cHHHHHHHHHhccccCh
Q 020253 230 FLTHRLALLRAADKYDI 246 (328)
Q Consensus 230 ~~~~~~~ll~~A~~~~~ 246 (328)
..+.+.+|+.+|+.+++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 23667788888877653
No 36
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.45 E-value=1.6e-07 Score=68.14 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=58.1
Q ss_pred EEEEe-CCeEEehhHHHHhccCHHHHHhccC--cccccCcceEEcCCCCHHHHHHHhhhhcCCc----c------ccccH
Q 020253 165 IIINA-SNGSTGAHRAVLAARSPVFRSMFSH--DLKEKELSTIDIPDMSIDACQAFLSYIYGNI----E------HEEFL 231 (328)
Q Consensus 165 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~--~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~~----~------~~~~~ 231 (328)
|+|+. +|+.|.+++.+ |.+|++++.|+.. .+.|+..+.|+|++++...++.+++|+|... . .....
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 56666 78899999996 8899999999975 3356667899999999999999999998421 0 01112
Q ss_pred HHHHHHHHhccccCh
Q 020253 232 THRLALLRAADKYDI 246 (328)
Q Consensus 232 ~~~~~ll~~A~~~~~ 246 (328)
+.+.+|+.+|+.+++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 567788888877653
No 37
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.45 E-value=9.3e-07 Score=71.07 Aligned_cols=102 Identities=12% Similarity=0.175 Sum_probs=74.5
Q ss_pred cEEEEe-CCeEEehhHHHHhccCHHHHHhccCccc----ccCcceEEcCCCCHHHHHHHhhhhcC--Ccc-c--------
Q 020253 164 DIIINA-SNGSTGAHRAVLAARSPVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYG--NIE-H-------- 227 (328)
Q Consensus 164 Dv~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~----e~~~~~v~l~~~~~~~f~~ll~~iY~--~~~-~-------- 227 (328)
-|+|+. +|+.|.+++.+ |.+|..++.|+..... +.....|.|++++...++.+++|++. +.. +
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 467766 57799999997 7799999999975322 23347899999999999999999973 111 0
Q ss_pred -------------cccHHHHHHHHHhccccChHhHHHHHHHHHHhcCChhhH
Q 020253 228 -------------EEFLTHRLALLRAADKYDICDLKEACHDSLVEDIDTKNV 266 (328)
Q Consensus 228 -------------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~ 266 (328)
.....++.+|+.+|++++++.|.+.|++.+...+...++
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktp 138 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSP 138 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCH
Confidence 112366889999999999999999999888665444443
No 38
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.44 E-value=6.9e-07 Score=66.21 Aligned_cols=95 Identities=17% Similarity=0.125 Sum_probs=72.9
Q ss_pred cEEEEeCCeEEehhHHHHhccC-HHHHHhccCccc----ccCcceEEcCCCCHHHHHHHhhhhcCCccccccHHHHHHHH
Q 020253 164 DIIINASNGSTGAHRAVLAARS-PVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALL 238 (328)
Q Consensus 164 Dv~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~~~----e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~~~~~~~~~~ll 238 (328)
-|+|.|||..|...+..|+... .+|.+||.+... ....+++-+ |-+|..|+.+|+|+.++.......-....++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 4789999999999999998875 588999876421 112345555 7899999999999998732221113347899
Q ss_pred HhccccChHhHHHHHHHHHHh
Q 020253 239 RAADKYDICDLKEACHDSLVE 259 (328)
Q Consensus 239 ~~A~~~~~~~l~~~c~~~l~~ 259 (328)
.-|+.|+++.|.+.|++.+.+
T Consensus 86 ~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 86 EEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhc
Confidence 999999999999999998764
No 39
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=1.9e-06 Score=63.68 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=48.9
Q ss_pred HhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH-hhhhhhccccchHHHHhhCcHHHHHH
Q 020253 258 VEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV-KFGKIFDIRDDFSVFLQCADRELIAE 316 (328)
Q Consensus 258 ~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~-~~~~v~~~~~~~~~~~~~~~~~l~~~ 316 (328)
.+.++++||+.++.+|+.|++..|++.|.+||. ||.++.+ .++|++++..++...
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~----~~eFl~L~~~~L~~l 60 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQN----TEEFLHLPHRLLTDI 60 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHT----SHHHHHSCHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh----cccHhhCCHHHHHHH
Confidence 456899999999999999999999999999999 9999988 889998886666554
No 40
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.04 E-value=5.5e-06 Score=61.64 Aligned_cols=82 Identities=17% Similarity=0.158 Sum_probs=58.9
Q ss_pred cEEEEe-CCeEEehhHHHHhccCHHHHHhccC--cccccCcceEEcCCCCHHHHHHHhhhhcCCc----c------cccc
Q 020253 164 DIIINA-SNGSTGAHRAVLAARSPVFRSMFSH--DLKEKELSTIDIPDMSIDACQAFLSYIYGNI----E------HEEF 230 (328)
Q Consensus 164 Dv~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~--~~~e~~~~~v~l~~~~~~~f~~ll~~iY~~~----~------~~~~ 230 (328)
-|+|+. +|+.|.+++. .|.+|+.++.|+.. .+.|.....|.|++++...++.+++|++... . ....
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 477774 7789999999 57799999999974 3446666789999999999999999997311 0 0122
Q ss_pred HHHHHHHHHhccccCh
Q 020253 231 LTHRLALLRAADKYDI 246 (328)
Q Consensus 231 ~~~~~~ll~~A~~~~~ 246 (328)
.+++.+|+.+|+.+++
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 3678888888887764
No 41
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.39 E-value=0.00012 Score=59.84 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=71.6
Q ss_pred cEEEEeCCeEEehhHHHHhccC-HHHHHhccCccc----ccCcceEEcCCCCHHHHHHHhhhhcCCccccccHHHHHHHH
Q 020253 164 DIIINASNGSTGAHRAVLAARS-PVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALL 238 (328)
Q Consensus 164 Dv~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~~~----e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~~~~~~~~~~ll 238 (328)
=|+|.|||..|...+..|.... .+|.+||.+... ....+++-| |-+|..|+.+|+|+.++.......-....++
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~ 91 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 91 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHH
Confidence 4789999999999999998764 478888876421 112344544 6799999999999997732221113346799
Q ss_pred HhccccChHhHHHHHHHHHHhc
Q 020253 239 RAADKYDICDLKEACHDSLVED 260 (328)
Q Consensus 239 ~~A~~~~~~~l~~~c~~~l~~~ 260 (328)
.-|+.|+++.|.+.|.+.|.+.
T Consensus 92 eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 92 EEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCcHHHHHHHHHHHHHH
Confidence 9999999999999999988754
No 42
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=97.23 E-value=0.002 Score=61.58 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=55.0
Q ss_pred ccceeEEEEEccCC-----CCceeecCCcee-cCeeEEEEEEeCCceEEEEeecccc----cCCCCCcE-EEEEEEEEec
Q 020253 10 TTSRLAQWRIDNLA-----SCSYRKSDPFKI-GKWNWHLSLEKNRMLFVKLYPEVSN----LTRDNPPI-ASFIIRVVSS 78 (328)
Q Consensus 10 ~~~~~~~w~I~~~~-----~g~~~~S~~F~v-gg~~W~l~~yp~g~~~vsL~~~~~~----~~~~w~v~-a~f~~~l~~~ 78 (328)
..-..+.|+|.||+ ++..+.||+|.- .||.++|.+|+++..+++||..+.. ..-.|++. -++.+.|+||
T Consensus 403 G~CP~~vw~i~nfs~~l~~~~~~~~Sp~Fys~~GY~~~v~l~~~~~~~~~~~~~l~sG~~D~~L~WP~~~~q~t~~llDQ 482 (592)
T 4gwm_A 403 TRCPHHIWHIRNFTQFIGSPNGTLYSPPFYSSKGYAFQIYLNLAHVTNAGIYFHLISGANDDQLQWPCPWQQATMTLLDQ 482 (592)
T ss_dssp SCCCSEEEEECSCGGGTTCTTCEEECCCEECTTSCEEEEEEECCSSSEEEEEEEEECCTTGGGSCSSCCSEEEEEEECCC
T ss_pred CCCCCCceeecCHHHhhcCCCCceeCCCccCCCCeEEEEEEecCCCceEEEEEEEecCCCCCCccCCCCCCEEEEEEeCC
Confidence 34457899999995 366799999954 5999999999988666666665533 24479984 5799999999
Q ss_pred CCC
Q 020253 79 VGD 81 (328)
Q Consensus 79 ~~~ 81 (328)
+..
T Consensus 483 ~pd 485 (592)
T 4gwm_A 483 NPD 485 (592)
T ss_dssp CSS
T ss_pred CCC
Confidence 644
No 43
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.88 E-value=0.0011 Score=49.28 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=64.5
Q ss_pred cEEEEeCCeEEehhHHHHhccC-HHHHHhccCcc-cccCcceEEcCCCCHHHHHHHhhhhcCCccccccHHHHHHHHHhc
Q 020253 164 DIIINASNGSTGAHRAVLAARS-PVFRSMFSHDL-KEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALLRAA 241 (328)
Q Consensus 164 Dv~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~~-~e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~~~~~~~~~~ll~~A 241 (328)
=|+|.|||..|...+..|.... ..+.+|+.+.. -....+++-+ |-+|..|+.+|+|+.+|............++.-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 4889999999999999998754 34556665421 1223445555 6799999999999997732211113457899999
Q ss_pred cccChHhHHH--HHHHHHHhc
Q 020253 242 DKYDICDLKE--ACHDSLVED 260 (328)
Q Consensus 242 ~~~~~~~l~~--~c~~~l~~~ 260 (328)
+.|+++.... -|...+.+.
T Consensus 85 ~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 85 EFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp HHHTCCGGGBCGGGSHHHHSC
T ss_pred HHhCCChHHHHHHHHHHHHhc
Confidence 9999987532 244444443
No 44
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.44 E-value=0.011 Score=44.56 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=61.6
Q ss_pred ccEEEEeCCeEEehhHHHHhccCHHHHHhccCcc----cccCcceEEcCCCCHHHHHHHhhhhcCCccccccHHHHHHHH
Q 020253 163 TDIIINASNGSTGAHRAVLAARSPVFRSMFSHDL----KEKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALL 238 (328)
Q Consensus 163 ~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~----~e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~~~~~~~~~~ll 238 (328)
.-|+|.|||..|...+..|..... ++|.... .....+++-+ |-++..|+.+|+|+.+|.........+..++
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 88 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYD 88 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 358899999999999999976532 3443311 1122344544 5699999999999998733221113568899
Q ss_pred HhccccChHhHH-HH-HHHHHH
Q 020253 239 RAADKYDICDLK-EA-CHDSLV 258 (328)
Q Consensus 239 ~~A~~~~~~~l~-~~-c~~~l~ 258 (328)
.-|+.|+++.+. .. |.+.+.
T Consensus 89 ~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 89 DELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp HHHHHTTCCGGGBCHHHHHHHH
T ss_pred HHHHHcCCChHHHHHHHHHHHH
Confidence 999999998863 44 444433
No 45
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.10 E-value=0.011 Score=42.76 Aligned_cols=83 Identities=10% Similarity=0.014 Sum_probs=57.2
Q ss_pred EEEEeCCeEEehhHHHHhccCH-HHHHhccC-cccccCcceEEcCCCCHHHHHHHhhhhcC-Ccc--ccccHHHHHHHHH
Q 020253 165 IIINASNGSTGAHRAVLAARSP-VFRSMFSH-DLKEKELSTIDIPDMSIDACQAFLSYIYG-NIE--HEEFLTHRLALLR 239 (328)
Q Consensus 165 v~l~v~~~~f~~hk~iLa~~S~-~F~~~f~~-~~~e~~~~~v~l~~~~~~~f~~ll~~iY~-~~~--~~~~~~~~~~ll~ 239 (328)
|+|.|||..|...+..|+.... .+.+|+.. ..-....+++-+ |-+|..|+.+|+|+.+ |.. +.. ..+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~--~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN--VPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT--SCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC--CCHHHHHH
Confidence 7889999999999999975422 22233321 111123455555 6799999999999997 632 333 35678999
Q ss_pred hccccChHhHH
Q 020253 240 AADKYDICDLK 250 (328)
Q Consensus 240 ~A~~~~~~~l~ 250 (328)
-|+.|+++.+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998743
No 46
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.28 E-value=0.0099 Score=43.34 Aligned_cols=81 Identities=12% Similarity=0.068 Sum_probs=56.1
Q ss_pred EEEEeCCeEEehhHHHHhccCHHHHHhccCccc----ccCcceEEcCCCCHHHHHHHhhhhcCCccccccHHHHHHHHHh
Q 020253 165 IIINASNGSTGAHRAVLAARSPVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLALLRA 240 (328)
Q Consensus 165 v~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~----e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~~~~~~~~~~ll~~ 240 (328)
|+|.|||..|...+..|..... +||....+ ....+++-+ |-+|..|+.+|+|+-++.........+..++.-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 6899999999999999986542 34433111 112344444 569999999999999773322111346789999
Q ss_pred ccccChHhH
Q 020253 241 ADKYDICDL 249 (328)
Q Consensus 241 A~~~~~~~l 249 (328)
|+.|+++.+
T Consensus 78 a~fy~i~~l 86 (105)
T 1nn7_A 78 LAFFGLIPE 86 (105)
T ss_dssp HHHHTCCSC
T ss_pred HHHcCCCHH
Confidence 999999875
No 47
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.21 E-value=0.024 Score=43.59 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=58.3
Q ss_pred cccEEEEeCCeEEehhHHHHhccCHHHHHhccCccc----ccCcceEEcCCCCHHHHHHHhhhhcCCccccccHHHHHHH
Q 020253 162 HTDIIINASNGSTGAHRAVLAARSPVFRSMFSHDLK----EKELSTIDIPDMSIDACQAFLSYIYGNIEHEEFLTHRLAL 237 (328)
Q Consensus 162 ~~Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~----e~~~~~v~l~~~~~~~f~~ll~~iY~~~~~~~~~~~~~~l 237 (328)
..-|+|.|||..|...+..|.... .+||..... ....+++-+ |-++..|+.+|+|+.++.........+..+
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 109 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAY 109 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHH
Confidence 345889999999999999998653 234433111 122344444 569999999999999773222111347889
Q ss_pred HHhccccChHhH
Q 020253 238 LRAADKYDICDL 249 (328)
Q Consensus 238 l~~A~~~~~~~l 249 (328)
+.-|+.|+++.+
T Consensus 110 ~eEa~fy~i~~l 121 (140)
T 2nz0_B 110 DDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999886
No 48
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=85.14 E-value=1.1 Score=32.14 Aligned_cols=30 Identities=30% Similarity=0.609 Sum_probs=28.2
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|++|+++.|++.|.+++.
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 577899999999999999999999999996
No 49
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.04 E-value=1.2 Score=31.91 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=28.2
Q ss_pred HHHHHHHHHhccccChHhHHHHHHHHHHhcC
Q 020253 231 LTHRLALLRAADKYDICDLKEACHDSLVEDI 261 (328)
Q Consensus 231 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 261 (328)
.+|+..++.+|+.|+++.|...|.+|+.++.
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999998763
No 50
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=78.77 E-value=2.2 Score=31.14 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=27.8
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+|+..++..|+.+....|++.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 577899999999999999999999999984
No 51
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=76.99 E-value=2.9 Score=30.25 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.+++..|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 567899999999999999999999999873
No 52
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=76.85 E-value=2.8 Score=30.87 Aligned_cols=30 Identities=13% Similarity=0.453 Sum_probs=28.1
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.+++..|++.|.+++.
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 567899999999999999999999999986
No 53
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=76.11 E-value=3.4 Score=29.98 Aligned_cols=29 Identities=31% Similarity=0.509 Sum_probs=27.0
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYL 289 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i 289 (328)
++.+++..++..|+.|+...|++.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 56789999999999999999999999987
No 54
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=76.06 E-value=3.5 Score=30.08 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.++...|++.|.+++.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 118 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 567899999999999999999999999986
No 55
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=74.56 E-value=1.5 Score=32.98 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=28.4
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+|+..++..|+.+++..|++.|.+|+.
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 577899999999999999999999999997
No 56
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=71.81 E-value=2.6 Score=39.54 Aligned_cols=83 Identities=12% Similarity=0.050 Sum_probs=56.2
Q ss_pred cEEEEeCCeEEehhHHHHhccCHHHHHhccC-----cccccCcceEEcCCCCHHHHHHHhhhhcC-CccccccHHHHHHH
Q 020253 164 DIIINASNGSTGAHRAVLAARSPVFRSMFSH-----DLKEKELSTIDIPDMSIDACQAFLSYIYG-NIEHEEFLTHRLAL 237 (328)
Q Consensus 164 Dv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~-----~~~e~~~~~v~l~~~~~~~f~~ll~~iY~-~~~~~~~~~~~~~l 237 (328)
-|+|-|||..|...+..|..... +++.. ..-....++.-+ |-++..|+.+|+|+.+ |.......-....+
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~---s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~ 128 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPE---TLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIF 128 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---STTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCC---CcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHH
Confidence 48899999999999999975422 22221 111223445555 6799999999999997 63222111345678
Q ss_pred HHhccccChHhHH
Q 020253 238 LRAADKYDICDLK 250 (328)
Q Consensus 238 l~~A~~~~~~~l~ 250 (328)
++-|+.|+++.+.
T Consensus 129 ~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 129 SEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHTTCCHHH
T ss_pred HHHHHhcCCCHHH
Confidence 8999999998753
No 57
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=71.18 E-value=2.2 Score=32.03 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=28.3
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+|+..++..|+.|++..|++.|.+|+.
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~ 116 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQP 116 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 577899999999999999999999999997
No 58
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=70.96 E-value=3.8 Score=31.80 Aligned_cols=30 Identities=30% Similarity=0.240 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.|.+..|++.|.+++.
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 129 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALC 129 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 456889999999999999999999999998
No 59
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=70.11 E-value=2.8 Score=30.55 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+|+..++..|+.++.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 567899999999999999999999999885
No 60
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=67.54 E-value=3 Score=31.69 Aligned_cols=29 Identities=28% Similarity=0.525 Sum_probs=26.7
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYL 289 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i 289 (328)
++.+++..++..|+.|++..|++.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 56789999999999999999999999875
No 61
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=60.78 E-value=6.8 Score=28.56 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=27.1
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+|+..++..|+.+....|++.|.++++
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 578899999999999999999999999875
No 62
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=49.48 E-value=9 Score=28.57 Aligned_cols=30 Identities=30% Similarity=0.240 Sum_probs=26.0
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.|.+..|++.|.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 120 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALC 120 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC--
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 456789999999999999999999999997
No 63
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=47.57 E-value=3.6 Score=30.42 Aligned_cols=31 Identities=6% Similarity=0.139 Sum_probs=23.2
Q ss_pred cCChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 260 DIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 260 ~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
.++.+|+..++..|+.+....|++.|.+|+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3678899999999999999999999999986
No 64
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=47.47 E-value=14 Score=31.75 Aligned_cols=28 Identities=32% Similarity=0.337 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 263 TKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 263 ~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
.+++..++..|++|++..|+..|.+++.
T Consensus 242 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 269 (312)
T 3hqi_A 242 DKMADDLLAAADKYALERLKVMCEDALC 269 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4678899999999999999999999997
No 65
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=41.40 E-value=24 Score=29.29 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=27.7
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.+....|++.|.+|+.
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~ 128 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE 128 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 578899999999999999999999999997
No 66
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=40.36 E-value=18 Score=30.51 Aligned_cols=30 Identities=33% Similarity=0.413 Sum_probs=28.2
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
++.+++..++..|+.++...|++.|.+++.
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~ 136 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLK 136 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 467899999999999999999999999998
No 67
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=38.34 E-value=2 Score=31.63 Aligned_cols=29 Identities=21% Similarity=0.447 Sum_probs=26.3
Q ss_pred CChhhHHHHHHHHHhcCChHHHHHHHHHH
Q 020253 261 IDTKNVLERLQNAYLYQLPKLKSSCMRYL 289 (328)
Q Consensus 261 l~~~~~~~~l~~A~~~~~~~L~~~~~~~i 289 (328)
++.+|+..++..|+.+++..|++.|.+|+
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 46789999999999999999999998876
No 68
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=37.76 E-value=29 Score=17.02 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=16.1
Q ss_pred HHHHHHHhcCChHHHHHHHHH
Q 020253 268 ERLQNAYLYQLPKLKSSCMRY 288 (328)
Q Consensus 268 ~~l~~A~~~~~~~L~~~~~~~ 288 (328)
..+-.|.+|..++|...|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 456678888888888888764
No 69
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=28.91 E-value=70 Score=24.34 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=31.8
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 252 ACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 252 ~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
...+|+ .++.+++..++..|...+...|.+.|.++++
T Consensus 87 wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va 123 (159)
T 2ast_A 87 WDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (159)
T ss_dssp HHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 344445 3788999999999999999999999999997
No 70
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=27.95 E-value=12 Score=27.72 Aligned_cols=30 Identities=27% Similarity=0.258 Sum_probs=21.6
Q ss_pred cceeeccceeEEEEEccCC----CCceeecCCce
Q 020253 5 AYRVDTTSRLAQWRIDNLA----SCSYRKSDPFK 34 (328)
Q Consensus 5 ~~~~~~~~~~~~w~I~~~~----~g~~~~S~~F~ 34 (328)
+...-+.+|-+.|+|++|. .|.++.|=.|.
T Consensus 4 ~~cpv~~~gd~vwkIs~F~~RKpeGty~nsvsFn 37 (133)
T 3v0r_A 4 ASCPVTTEGDYVWKISEFYGRKPEGTYYNSLGFN 37 (133)
T ss_dssp CCSSSCCCCTTEEEEEEEEEEETTSSSCSEEEEE
T ss_pred CCCccccCCceEEEeeeeeeEcCCCCceeeEEEE
Confidence 3456677888999999985 46667776663
No 71
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=25.45 E-value=36 Score=25.31 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=9.4
Q ss_pred eeEEEEEccCCCCceeecCCcee-----cCeeEEEE
Q 020253 13 RLAQWRIDNLASCSYRKSDPFKI-----GKWNWHLS 43 (328)
Q Consensus 13 ~~~~w~I~~~~~g~~~~S~~F~v-----gg~~W~l~ 43 (328)
|...+.|.||..|-.. +..|++ |.+.|+|.
T Consensus 2 ~~~~~~~~~~~~~~~M-ag~FEi~~~~~G~~rfrLk 36 (130)
T 2k8e_A 2 GHMLFSIHNFNQGVIM-AGWFELSKSSDNQFRFVLK 36 (130)
T ss_dssp ------------CCCC-CCEEEEEECTTCCEEEEEE
T ss_pred CcEEEEEeccCcccee-eeeEEEEEcCCCCEEEEEE
Confidence 5567788888877533 566654 34555543
No 72
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=21.18 E-value=1.5e+02 Score=21.86 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=31.5
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 020253 252 ACHDSLVEDIDTKNVLERLQNAYLYQLPKLKSSCMRYLV 290 (328)
Q Consensus 252 ~c~~~l~~~l~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 290 (328)
.-.+|+ .++.+++.+++..|.-.+...|.+.|.++++
T Consensus 82 wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA 118 (141)
T 1fs1_B 82 WDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 118 (141)
T ss_dssp HHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 334444 3788999999999999999999999999997
Done!