Citrus Sinensis ID: 020254

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MQRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccccHHcccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEccccccEEccccccccccHHHHHHHHHHHHHcccccccEEEEEEcEEEccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEEEccccccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHccccccEEEEEEccccccHHHHHcccccEEEEcccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcEEEEEcccccEEEccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccHHHHHccccEEccccccccccccccHEcHHHHHHHHHHHHHcccccccEEccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHcccEEEcccHHHHHHHHHc
Coil and Loop (DISEMBL)
mqrceakkfrvfctsdhtqkasqmtvsvtgatgfIGRRLVQRLQADNHQVrvltrsrskaelifpgkktrffpgvmiaeepqwrdciqgsTAVVNlagtpigtrwSSEIKKEIKESRIRVTSKVVDLinespegvrpsVLVSATAlgyygtsetevfdesspsgnDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFmmfaggplgsgqqwfswIHLDDIVNLIYEAlsnpsyrgvingtapnpvRLAEMCDHLgnvlgrpswlpvpEFALKAVLGEGAFVVLEGQRVVPArakelgfpfkYRYVKDALKAIMS
Flexible Loop (DISEMBL)
mqrceakkfrvfctsdhtqkasqmtvsvTGATGFIGRRLVQrlqadnhqvrvltrsrskaelifpgkktrffpGVMIAEEPQWRDCIQGSTAVVNLagtpigtrwsseikkeikesrirvtskvvdlinespegvrpsvlVSATALGYYGTSetevfdesspsGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVparakelgfpfkyryVKDALKAIMS
Low Complexity Region (SEG)
MQRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered region (IsUnstruct)
********FRVFCTSD******QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF*******NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF*********QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALK****
Disordered Region (DISOPRED)
*****AKKF*************QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK****FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered Region (DISEMBL)
********FRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS**********SGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered Region (DISPRO)
***CEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	328	2.2.26 [Sep-21-2011]
P73467	307	Epimerase family protein	N/A	no	0.908	0.970	0.498	1e-78
P77775	297	Epimerase family protein	N/A	no	0.896	0.989	0.408	1e-57
O31574	303	Epimerase family protein	yes	no	0.902	0.976	0.351	1e-46
P71373	296	Epimerase family protein	yes	no	0.881	0.976	0.359	5e-45
Q5M8N4	308	Epimerase family protein	yes	no	0.865	0.922	0.343	1e-44
O32960	307	Epimerase family protein	yes	no	0.890	0.951	0.351	2e-44
Q17QH8	294	Epimerase family protein	yes	no	0.878	0.979	0.347	4e-44
Q4L4J7	299	Epimerase family protein	yes	no	0.878	0.963	0.338	1e-42
Q8CPY7	299	Epimerase family protein	yes	no	0.868	0.953	0.338	1e-41
Q5HQV8	299	Epimerase family protein	yes	no	0.868	0.953	0.338	1e-41

>sp|P73467|Y1223_SYNY3 Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1223 PE=3 SV=2

 Score =  293 bits (749), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 207/311 (66%), Gaps = 13/311 (4%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGV-MIAEEP 81
           M + +TGATGF+G  LV  L    H++ +L RS SKA+ +F PG     FP +  IA E 
Sbjct: 1   MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----FPQLKAIAYEA 56

Query: 82  ----QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 137
                W+  + G  AV+NLAG PI  RW+   K EI +SR   T K+V+ I ++    +P
Sbjct: 57  TKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKADR--KP 114

Query: 138 SVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIV 196
            V++S +A+GYYGTSET  F ESS  G+D+LAEVC+ WE  A +V +  VRL + RIGIV
Sbjct: 115 QVMISGSAIGYYGTSETATFTESSKPGDDFLAEVCQAWENAAHQVEQLGVRLVVFRIGIV 174

Query: 197 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 256
           LG DGGALAKM+P F +FAGGPLGSG+QWFSWI   D++ LI +AL++ + RG  N TAP
Sbjct: 175 LGADGGALAKMLPPFKLFAGGPLGSGEQWFSWIDRRDLIALIDKALTDSTLRGTYNATAP 234

Query: 257 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 316
           NPV++ E C  LG VL RPSWLPVP+ AL+ +LGEGA +VLEGQ V+P    +  F F+ 
Sbjct: 235 NPVKMKEFCHTLGKVLARPSWLPVPDIALELLLGEGAKLVLEGQEVLPGAISKTDFQFQA 294

Query: 317 RYVKDALKAIM 327
             ++ +L+ I+
Sbjct: 295 PDLETSLRQIL 305

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P77775|YFCH_ECOLI Epimerase family protein YfcH OS=Escherichia coli (strain K12) GN=yfcH PE=3 SV=1

 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/306 (40%), Positives = 182/306 (59%), Gaps = 12/306 (3%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++   
Sbjct: 1   MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56

Query: 84  RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
              + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S     PSVL+S
Sbjct: 57  ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS--DTPPSVLIS 111

Query: 143 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 201
            +A GYYG     V  E  P  N++  ++C  WE  A +   D  R+ L+R G+VL  DG
Sbjct: 112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
           G L KM+P F +  GGP+GSG+Q+ +WIH+DD+VN I   L N   RG  N  +P PVR 
Sbjct: 172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230

Query: 262 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 321
            +    LG+ L RP+ L VP  A++ ++GE + +VL GQR +P R +E GF F++  +++
Sbjct: 231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290

Query: 322 ALKAIM 327
           AL  ++
Sbjct: 291 ALADVV 296

Escherichia coli (strain K12) (taxid: 83333)

>sp|O31574|YFHF_BACSU Epimerase family protein YfhF OS=Bacillus subtilis (strain 168) GN=yfhF PE=3 SV=1

 Score =  187 bits (475), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 11/307 (3%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M +++TG TGF+G+ L   L    H V +L+R+  + E     K   +   +     P+ 
Sbjct: 1   MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNARETE----QKNMTYVQWLSEGAAPE- 55

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
              +      +NLAG  I  RW+ + K+ I  SRI  T +V  LI +  E  +P  L+ A
Sbjct: 56  -QELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQKQKE--KPKTLIQA 112

Query: 144 TALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDG 201
           +A+G YGTS  + F E S+ S  D+L+     WE     +    +R    R G++LG+ G
Sbjct: 113 SAVGIYGTSLEKTFTEDSATSDEDFLSHTAHLWEKEGQHIEAMGIRTVYARFGVMLGEKG 172

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
            AL  MI  +   AGG +G+G+QW SWIH++D   +I  A+ N    G +N TAPNPV +
Sbjct: 173 -ALPLMILPYKFLAGGTIGTGRQWLSWIHVEDAAQMIRYAVENAGISGPMNVTAPNPVDM 231

Query: 262 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 321
            +    +  V  RP WLPVPEF L   LGE + ++++GQR +P +A   GF F Y  ++ 
Sbjct: 232 KQFGKTIARVKHRPHWLPVPEFFLSKALGEMSLLIVKGQRALPKKAITSGFRFTYSDLEF 291

Query: 322 ALKAIMS 328
           AL  +++
Sbjct: 292 ALSQLIA 298

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P71373|Y1208_HAEIN Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1208 PE=3 SV=1

 Score =  181 bits (460), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 17/306 (5%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + +TG TG IG+ LV+RL   N QV +LTRS S   L    K  +F   +      + 
Sbjct: 1   MNILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHTLS-KHKNIKFITALSQLNSQEQ 59

Query: 84  RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
            D      A++NLAG PI  + WS   K  ++ESR+ +T+++V+ IN+  +     + +S
Sbjct: 60  FD------AIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQH---PIFIS 110

Query: 143 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 202
            +A G YG  + +   E+S +   + A++C++WE  A + N   R+ LIR G+V    GG
Sbjct: 111 GSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIAQQANG--RVCLIRTGMVFSTKGG 168

Query: 203 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 262
           ALAK++P +    GG LG G+Q+F WI L+D+VN I   L +   RG  N  AP  ++  
Sbjct: 169 ALAKILPFYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQH 228

Query: 263 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY----RY 318
           +    L  +L RP++  +P++ L  +LGE A ++LE Q VVP +    GF F+Y     Y
Sbjct: 229 KFNRTLAQLLKRPAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENY 288

Query: 319 VKDALK 324
           ++D LK
Sbjct: 289 LEDILK 294

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

>sp|Q5M8N4|D39U1_MOUSE Epimerase family protein SDR39U1 OS=Mus musculus GN=Sdr39u1 PE=1 SV=1

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 167/314 (53%), Gaps = 30/314 (9%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M V V G TGFIG  + Q L+   H+V++++R         PG+ T             W
Sbjct: 1   MRVLVGGGTGFIGTAVTQLLRGRGHEVKLVSRQPG------PGRIT-------------W 41

Query: 84  RDCIQGS----TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
            +  +        V+NLAG  I     RW+   +KE+  SR+  T  +   I E+     
Sbjct: 42  SELSESGLPLCDVVINLAGENILNPLRRWNETFQKEVLTSRLDTTHLLAKAITETAH--P 99

Query: 137 PSVLVSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGI 195
           P   +  T + YY  S T+ +DE SP GN D+ + +  +WE  A    +  R  ++R G+
Sbjct: 100 PQAWILVTGVAYYQPSLTKEYDEDSPGGNFDFFSNLVTKWEAAARLPGESTRQVVVRSGV 159

Query: 196 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 255
           VLG+ GGA++ M+  F +  GGP+GSG+Q+F WIH+ D+  ++  AL     +GV+NG A
Sbjct: 160 VLGRGGGAISHMLLPFRLGLGGPIGSGRQFFPWIHIGDLAGILNYALEANHVQGVLNGVA 219

Query: 256 PNPVRL-AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 314
           P      AE    LG  LGRP+++PVP   ++AV GE A ++LEGQ+VVP R    G+ +
Sbjct: 220 PASTTTNAEFAQALGAALGRPAFIPVPSTVVRAVFGERAIMLLEGQKVVPRRTLATGYQY 279

Query: 315 KYRYVKDALKAIMS 328
            +  ++ ALK +++
Sbjct: 280 SFPELRAALKDVVA 293

Mus musculus (taxid: 10090)

>sp|O32960|Y860_MYCLE Epimerase family protein ML0860 OS=Mycobacterium leprae (strain TN) GN=ML0860 PE=3 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 172/310 (55%), Gaps = 18/310 (5%)

Query: 19  QKASQMTVSVTGATGFIGRRLVQRLQADNHQV-RVLTRSRSKAELIFPGKKTRFFPGVMI 77
           Q + +  V++ G++G IG  L   L+A++H V R++ R+ + AE +    ++  F     
Sbjct: 3   QASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFD---- 58

Query: 78  AEEPQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
                  D I    AVVNL G  +G R WS   K+ +++SRI  T  +   + E+  GV+
Sbjct: 59  ------TDAITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVLSAAVAEA--GVK 110

Query: 137 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN-KDVRLALIRIGI 195
               ++A+A+GYYG +   V DE+  +G  +LA++C++WEG  L       R+ L R G+
Sbjct: 111 --TFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRVILARTGM 168

Query: 196 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 255
           VL ++ G L++M PLF    G  +G+G+Q+ SWI L+D V  +  A+S+ S  G +N T 
Sbjct: 169 VLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTG 228

Query: 256 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAKELGFPF 314
           P PV  AE     G  + RP+ L +P FA++A LGE A   +L GQR +PA  +  GF F
Sbjct: 229 PAPVTNAEFTTAFGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQF 288

Query: 315 KYRYVKDALK 324
            +  + +AL 
Sbjct: 289 HHNTIGEALS 298

Mycobacterium leprae (taxid: 1769)

>sp|Q17QH8|D39U1_BOVIN Epimerase family protein SDR39U1 OS=Bos taurus GN=SDR39U1 PE=2 SV=1

 Score =  178 bits (452), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 164/311 (52%), Gaps = 23/311 (7%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M V V G TGFIG  L Q L+A  H+V +++R      + +    T   P          
Sbjct: 1   MRVLVGGGTGFIGTALTQLLKARGHEVTLISRKPGPDRITWDDLTTSGLP---------- 50

Query: 84  RDCIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
             C     A VNLAG  I     RW++  +KE+  SR+  T  +   I ++P+   P   
Sbjct: 51  -RC----DAAVNLAGENILNPLRRWNAAFQKEVLSSRLETTQTLARAIAKAPQ--PPQAW 103

Query: 141 VSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 199
           V  T + YY  S T  +DE SP G+ D+ + +  +WE  A       R  ++R G+VLG+
Sbjct: 104 VLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGR 163

Query: 200 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP-NP 258
            GGA+  M+  F +  GGP+GSG Q+F WIH+ D+  ++  AL     +G++NG AP + 
Sbjct: 164 GGGAIGHMLLPFRLGLGGPIGSGHQFFPWIHIRDLAGILAHALETSHVQGILNGVAPASS 223

Query: 259 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYR 317
              AE    LG  LGRP+++P+P   ++AV G E A ++LEGQ+VVP R    G+ + + 
Sbjct: 224 TTNAEFARALGTALGRPAFIPLPSAVVQAVFGRERAVMLLEGQKVVPRRTLAAGYRYSFP 283

Query: 318 YVKDALKAIMS 328
            +  ALK +++
Sbjct: 284 ELGAALKEVIA 294

Bos taurus (taxid: 9913)

>sp|Q4L4J7|Y2119_STAHJ Epimerase family protein SH2119 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2119 PE=3 SV=1

 Score =  174 bits (440), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ--WRD 85
           +TG TG +G +LV +L+  +  + +LTRS  +++           P +      +  W  
Sbjct: 6   ITGGTGMVGSQLVNKLKNRDVHITILTRSDKQSDD----------PKISYVNWSKDGWMS 55

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
            +     VVNLAG  +  RW+   K+ I  SRI+ T  +VDL ++     +P VL +A+A
Sbjct: 56  QVPDIDVVVNLAGATLNKRWTPSYKQLIMTSRIQSTQSLVDLFSQREH--KPEVLFNASA 113

Query: 146 LGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 203
           +GYY  S    + E   +   D+L++V  +WE  A +      R+ L R  ++L  DGGA
Sbjct: 114 MGYYPPSLYHTYTEKYQTHPFDFLSDVVYQWERFAKRFESFGTRVVLGRFSMILSNDGGA 173

Query: 204 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 263
           L  M   +  F GG LGSG QW+SWIH++D+V  I   + NP+ +G  N  AP   R   
Sbjct: 174 LQTMKLPYKFFVGGKLGSGFQWYSWIHINDLVRAILFTIDNPNAKGPFNMAAPIAERQNL 233

Query: 264 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 323
               L  V+ RP    VP F ++  LGE + VVL+ Q+V+P +   LGF F Y  +K A 
Sbjct: 234 FGYTLARVMHRPHETWVPSFLMRLALGEMSTVVLDTQKVLPNKLDALGFTFNYSNLKIAF 293

Query: 324 KAIM 327
           + ++
Sbjct: 294 EDLI 297

Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808)

>sp|Q8CPY7|Y553_STAES Epimerase family protein SE_0553 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0553 PE=3 SV=1

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 167/307 (54%), Gaps = 22/307 (7%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ--WRD 85
           +TG TG +G  LV  ++  +  + +LTR            KT   P +      +  W+ 
Sbjct: 6   ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
            +     V+NLAG  +  RW+S  K+ +  SRI+ T  + +L  E+ E  +P VL +A+A
Sbjct: 56  QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELF-ETREH-KPEVLFNASA 113

Query: 146 LGYYG----TSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 200
           +GYY     TS TE++  + P   D+L+E+  +WE  A K  +   R+ L R G++L  D
Sbjct: 114 MGYYPPDLFTSYTELY-RTLPF--DFLSEIVYQWERFANKFKQFGTRVVLGRFGLILSDD 170

Query: 201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 260
           GGAL  M   + ++ GG LGSG+QW+SWIH+DD++  I   +++ +  G  N TAP P R
Sbjct: 171 GGALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPER 230

Query: 261 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
                  L   + +P     P+  L+AVLG+ + V+L+ Q+V+P +   LGF FKY  ++
Sbjct: 231 QNLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLR 290

Query: 321 DALKAIM 327
           +AL  ++
Sbjct: 291 NALDDLI 297

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

>sp|Q5HQV8|Y438_STAEQ Epimerase family protein SERP0438 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0438 PE=3 SV=1

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 167/307 (54%), Gaps = 22/307 (7%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ--WRD 85
           +TG TG +G  LV  ++  +  + +LTR            KT   P +      +  W+ 
Sbjct: 6   ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
            +     V+NLAG  +  RW+S  K+ +  SRI+ T  + +L  E+ E  +P VL +A+A
Sbjct: 56  QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELF-ETREH-KPEVLFNASA 113

Query: 146 LGYYG----TSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 200
           +GYY     TS TE++  + P   D+L+E+  +WE  A K  +   R+ L R G++L  D
Sbjct: 114 MGYYPPDLFTSYTELY-RTLPF--DFLSEIVYQWERFANKFKQFGTRVVLGRFGLILSDD 170

Query: 201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 260
           GGAL  M   + ++ GG LGSG+QW+SWIH+DD++  I   +++ +  G  N TAP P R
Sbjct: 171 GGALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPER 230

Query: 261 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
                  L   + +P     P+  L+AVLG+ + V+L+ Q+V+P +   LGF FKY  ++
Sbjct: 231 QNLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLR 290

Query: 321 DALKAIM 327
           +AL  ++
Sbjct: 291 NALDDLI 297

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
224105291	350	predicted protein [Populus trichocarpa]	0.972	0.911	0.825	1e-155
255543879	351	conserved hypothetical protein [Ricinus	0.987	0.923	0.810	1e-154
357473587	350	hypothetical protein MTR_4g072040 [Medic	0.978	0.917	0.805	1e-153
297824979	350	hypothetical protein ARALYDRAFT_900542 [	0.969	0.908	0.794	1e-151
18399648	347	Rossmann-fold NAD(P)-binding domain-cont	0.960	0.907	0.803	1e-149
356545053	349	PREDICTED: epimerase family protein slr1	0.978	0.919	0.787	1e-149
225427778	357	PREDICTED: epimerase family protein slr1	0.978	0.899	0.784	1e-149
449461621	348	PREDICTED: epimerase family protein slr1	0.972	0.916	0.782	1e-147
363808106	350	uncharacterized protein LOC100813590 [Gl	0.972	0.911	0.773	1e-146
388519265	349	unknown [Lotus japonicus]	0.978	0.919	0.768	1e-146

>gi|224105291|ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1| predicted protein [Populus trichocarpa]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 269/326 (82%), Positives = 294/326 (90%), Gaps = 7/326 (2%)

Query: 3   RCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL 62
           RC  K+ RV C SD TQK   MTVSVTGATGFIG+RLVQRL AD H VRVLTRSRSKA+L
Sbjct: 32  RC-TKRLRVCCASDQTQK---MTVSVTGATGFIGKRLVQRLHADKHSVRVLTRSRSKAQL 87

Query: 63  IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTS 122
           IFP K+   FPG++IAEE  W+DCIQGS AVVNLAG PI TRWS E+KKEIK+SRI+VTS
Sbjct: 88  IFPVKE---FPGILIAEERDWKDCIQGSNAVVNLAGLPISTRWSPEVKKEIKQSRIKVTS 144

Query: 123 KVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV 182
           KVVDLIN SPEGVRP+VLVSATA+GYYG+SET+VFDE SPSGNDYLAEVCREWE TALKV
Sbjct: 145 KVVDLINGSPEGVRPAVLVSATAVGYYGSSETQVFDERSPSGNDYLAEVCREWEATALKV 204

Query: 183 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 242
           NKDVRLALIRIG+VLGKDGGALAKMIPLFM+FAGGP+GSGQQWFSWIHLDDIVNLIYEAL
Sbjct: 205 NKDVRLALIRIGVVLGKDGGALAKMIPLFMLFAGGPMGSGQQWFSWIHLDDIVNLIYEAL 264

Query: 243 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRV 302
           +NPSY+GVINGTAPNPVRLAEMC+ LGNV+GRPSWLPVP+FALKAVLGEGA VVL+GQRV
Sbjct: 265 TNPSYKGVINGTAPNPVRLAEMCEQLGNVMGRPSWLPVPDFALKAVLGEGASVVLDGQRV 324

Query: 303 VPARAKELGFPFKYRYVKDALKAIMS 328
           +P RAKELGF FKY  VKDALK I+S
Sbjct: 325 LPTRAKELGFQFKYPQVKDALKTILS 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543879|ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis] gi|223548013|gb|EEF49505.1| conserved hypothetical protein [Ricinus communis]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/327 (81%), Positives = 294/327 (89%), Gaps = 3/327 (0%)

Query: 1   MQRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 60
             R + ++  V   SD T K +QMTVSVTGATGFIGRRLVQRL ADNH + VLTRS+SKA
Sbjct: 28  FSRYDTRRLSVCGASDQTPKENQMTVSVTGATGFIGRRLVQRLHADNHNIHVLTRSKSKA 87

Query: 61  ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV 120
           +LIFPGK    FP ++IAEEP+W++ IQGS AVVNLAG PI TRWSSEIKKEIK+SRIRV
Sbjct: 88  QLIFPGKD---FPRIVIAEEPEWKNSIQGSDAVVNLAGMPISTRWSSEIKKEIKQSRIRV 144

Query: 121 TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTAL 180
           TSKVVDLIN+SPEGVRP+VLVSATA+GYYG+SET VFDESSPSGNDYLA VCREWEGTAL
Sbjct: 145 TSKVVDLINDSPEGVRPTVLVSATAVGYYGSSETRVFDESSPSGNDYLAGVCREWEGTAL 204

Query: 181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 240
           KVNKDVRLALIRIG+VLGK+GGALAKMIPLFMMFAGGPLGSG+QWFSWIHL+DIVNLIYE
Sbjct: 205 KVNKDVRLALIRIGVVLGKNGGALAKMIPLFMMFAGGPLGSGRQWFSWIHLEDIVNLIYE 264

Query: 241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQ 300
           AL NPSY+GVINGTAPNPVRLAEMC+ LGNVLGRPSWLPVP+FALKAVLGEGA VVL+GQ
Sbjct: 265 ALINPSYKGVINGTAPNPVRLAEMCEQLGNVLGRPSWLPVPDFALKAVLGEGASVVLDGQ 324

Query: 301 RVVPARAKELGFPFKYRYVKDALKAIM 327
           +V+P +AKELGF FKY YVKDALK I+
Sbjct: 325 KVLPTKAKELGFQFKYPYVKDALKTIL 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473587|ref|XP_003607078.1| hypothetical protein MTR_4g072040 [Medicago truncatula] gi|355508133|gb|AES89275.1| hypothetical protein MTR_4g072040 [Medicago truncatula]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/324 (80%), Positives = 290/324 (89%), Gaps = 3/324 (0%)

Query: 5   EAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 64
           E +KFRV+C +D + K  QM +SVTGATGFIG+RLVQ+LQA+NH+V VLTRS+SKAELIF
Sbjct: 30  ETRKFRVWCGTDQSSKGDQMIISVTGATGFIGKRLVQKLQAENHRVHVLTRSKSKAELIF 89

Query: 65  PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKV 124
           P K    FPGV IA EP+W+DCIQGST VVNLAG PI TRWSSEIKKEIK+SR+RVTSKV
Sbjct: 90  PVKD---FPGVKIAGEPEWKDCIQGSTGVVNLAGLPISTRWSSEIKKEIKQSRVRVTSKV 146

Query: 125 VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK 184
           VDLI  +P+  RP VLVSATA+GYYGTSET+VFDE SPSG DYLAEVCREWE TALK N 
Sbjct: 147 VDLIKRAPDETRPQVLVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALKANG 206

Query: 185 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 244
           DVR+ALIRIG+VLGKDGGALAKMIPLFMMFAGGPLGSG QWFSWIHLDDIVNLIYEALSN
Sbjct: 207 DVRVALIRIGVVLGKDGGALAKMIPLFMMFAGGPLGSGNQWFSWIHLDDIVNLIYEALSN 266

Query: 245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVP 304
           PSY+GVINGTAPNPVRL+E+C+ LGNVLGRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP
Sbjct: 267 PSYKGVINGTAPNPVRLSELCEQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQKVVP 326

Query: 305 ARAKELGFPFKYRYVKDALKAIMS 328
            +AK+LGF FKY YVKDALKAI+S
Sbjct: 327 TQAKKLGFSFKYSYVKDALKAIIS 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824979|ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata] gi|297326211|gb|EFH56631.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 255/321 (79%), Positives = 288/321 (89%), Gaps = 3/321 (0%)

Query: 7   KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 66
           ++F V C+S+ +QK +QMTVSVTGATGFIGR+LVQRL+ADNH +RVLTRS+SKAE IFP 
Sbjct: 32  RRFMVLCSSEKSQKENQMTVSVTGATGFIGRKLVQRLRADNHSIRVLTRSKSKAEQIFPA 91

Query: 67  KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 126
           K    FPG++IAEE  W++C+QGSTAVVNLAG PI TRWS EIKKEIK+SRIR+TSKVVD
Sbjct: 92  KD---FPGIVIAEESDWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKDSRIRITSKVVD 148

Query: 127 LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDV 186
           LIN SP   RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDV
Sbjct: 149 LINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDV 208

Query: 187 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 246
           R+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPS
Sbjct: 209 RVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPS 268

Query: 247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 306
           Y+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P R
Sbjct: 269 YQGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVR 328

Query: 307 AKELGFPFKYRYVKDALKAIM 327
           AKELGF FKY+YVKDAL+AIM
Sbjct: 329 AKELGFEFKYKYVKDALRAIM 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399648|ref|NP_565505.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|11692898|gb|AAG40052.1|AF324701_1 At2g21280 [Arabidopsis thaliana] gi|11908096|gb|AAG41477.1|AF326895_1 unknown protein [Arabidopsis thaliana] gi|12642906|gb|AAK00395.1|AF339713_1 unknown protein [Arabidopsis thaliana] gi|20197908|gb|AAD23676.2| expressed protein [Arabidopsis thaliana] gi|23397230|gb|AAN31897.1| unknown protein [Arabidopsis thaliana] gi|34787115|emb|CAD56855.1| SulA protein [Arabidopsis thaliana] gi|330252061|gb|AEC07155.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/321 (80%), Positives = 286/321 (89%), Gaps = 6/321 (1%)

Query: 7   KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 66
           ++F V C+S   QK SQMTVSVTGATGFIGRRLVQRL+ADNH +RVLTRS+SKAE IFP 
Sbjct: 32  RRFMVLCSS---QKESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPA 88

Query: 67  KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 126
           K    FPG++IAEE +W++C+QGSTAVVNLAG PI TRWS EIKKEIK SRIRVTSKVVD
Sbjct: 89  KD---FPGIVIAEESEWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVD 145

Query: 127 LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDV 186
           LIN SP   RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDV
Sbjct: 146 LINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDV 205

Query: 187 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 246
           R+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPS
Sbjct: 206 RVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPS 265

Query: 247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 306
           Y+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P R
Sbjct: 266 YKGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVR 325

Query: 307 AKELGFPFKYRYVKDALKAIM 327
           AKELGF FKY+YVKDAL+AIM
Sbjct: 326 AKELGFEFKYKYVKDALRAIM 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545053|ref|XP_003540960.1| PREDICTED: epimerase family protein slr1223-like [Glycine max]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 255/324 (78%), Positives = 286/324 (88%), Gaps = 3/324 (0%)

Query: 5   EAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 64
           EA+ F V+C SD   K ++M +SVTGATGFIGRRLVQRL ADNH V VLTRS+SKAE IF
Sbjct: 29  EARSFCVWCVSDQDPKGNKMIISVTGATGFIGRRLVQRLHADNHSVHVLTRSKSKAETIF 88

Query: 65  PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKV 124
           P K    FPG+ IAEEP+W+D +QGST VVNLAG PI TRWS EIKKEIK+SRIRVTSKV
Sbjct: 89  PAKD---FPGIKIAEEPEWKDSVQGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKV 145

Query: 125 VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK 184
            +LIN +P+ +RP V VSATA+GYYGTSET+VFDE SPSG DYLAEVCREWE TALKVN 
Sbjct: 146 AELINSAPDDIRPKVFVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALKVNG 205

Query: 185 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 244
           DVR+ALIRIG+VLGKDGGAL KMIP+F +FAGGPLGSG+QWFSWIHL+DIVNLIYEALSN
Sbjct: 206 DVRVALIRIGVVLGKDGGALVKMIPIFNLFAGGPLGSGKQWFSWIHLEDIVNLIYEALSN 265

Query: 245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVP 304
           PSY+GVINGTAPNPVRLAE+CD LGNVLGRPSWLPVP+FALKAVLGEGA VVLEGQRV+P
Sbjct: 266 PSYKGVINGTAPNPVRLAELCDQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQRVLP 325

Query: 305 ARAKELGFPFKYRYVKDALKAIMS 328
            +AK+LGFPFKY YVKDAL+AI+S
Sbjct: 326 IQAKKLGFPFKYPYVKDALQAILS 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427778|ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 [Vitis vinifera] gi|297744722|emb|CBI37984.3| unnamed protein product [Vitis vinifera]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/329 (78%), Positives = 286/329 (86%), Gaps = 8/329 (2%)

Query: 4   CEAKKFRVFCT-----SDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 58
           CE+K  RV C      S  +QK +QM VSVTGATGFIGRRLVQRL ADNH+V VLTRSRS
Sbjct: 29  CESKGLRVCCAVNASASGQSQKENQMIVSVTGATGFIGRRLVQRLLADNHRVHVLTRSRS 88

Query: 59  KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRI 118
           KA+ IFP K    F G++IAEEP+W+DCIQGS AVVNLAG PI TRWS EIKKEIKESR+
Sbjct: 89  KAQFIFPAKD---FRGIVIAEEPEWKDCIQGSNAVVNLAGMPISTRWSPEIKKEIKESRV 145

Query: 119 RVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGT 178
           R+TSKVVD+IN S + VRP+VLVSA+A+GYYG SET VF E SPSGNDYLAEVCREWEG 
Sbjct: 146 RITSKVVDIINNSQDEVRPTVLVSASAIGYYGASETLVFKEQSPSGNDYLAEVCREWEGK 205

Query: 179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 238
           A KVNKDVRL LIRIG+VLGKDGGALAKMIPLF +FAGGPLGSG+QWFSWIHLDDIV LI
Sbjct: 206 AFKVNKDVRLVLIRIGVVLGKDGGALAKMIPLFNLFAGGPLGSGKQWFSWIHLDDIVELI 265

Query: 239 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLE 298
           YEALSNPSY GVINGTAPNPVRLAEMCDHLGN +GRPSWLPVP+FALKAVLGEGA VVL+
Sbjct: 266 YEALSNPSYTGVINGTAPNPVRLAEMCDHLGNAMGRPSWLPVPDFALKAVLGEGASVVLD 325

Query: 299 GQRVVPARAKELGFPFKYRYVKDALKAIM 327
           GQ+V+PARA++LGF FKY YVKDAL+AI+
Sbjct: 326 GQKVLPARAQQLGFTFKYPYVKDALRAIL 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461621|ref|XP_004148540.1| PREDICTED: epimerase family protein slr1223-like [Cucumis sativus]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/322 (78%), Positives = 284/322 (88%), Gaps = 3/322 (0%)

Query: 7   KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 66
            +FRVFC  D T+  +Q+TVS+TGATGFIGRRLVQRL AD H +RVLTRS+SKAELIFP 
Sbjct: 30  NRFRVFCAIDATKMKNQLTVSITGATGFIGRRLVQRLHADKHNIRVLTRSKSKAELIFPA 89

Query: 67  KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 126
           ++   FPG+MIAEEP W++CIQGS  VVNLAG PI TRWSSEIKKEIK+SRIRVTSKVV 
Sbjct: 90  RE---FPGIMIAEEPGWKNCIQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVS 146

Query: 127 LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDV 186
           LIN++P+  RP+VLVSATA+GYYGTSET  FDE SPSGNDYLA+VCREWE TAL VNK+V
Sbjct: 147 LINDAPDAARPTVLVSATAVGYYGTSETATFDERSPSGNDYLAQVCREWEATALGVNKNV 206

Query: 187 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 246
           R+ALIRIG+VLGK+GGALAKMIPLFMMFAGGPLGSG+QWFSWIHLDDIVNLIYEAL NPS
Sbjct: 207 RVALIRIGVVLGKEGGALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALINPS 266

Query: 247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 306
           Y+GVINGTAPNPV L E+C  LG  +GRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP R
Sbjct: 267 YQGVINGTAPNPVTLGELCKGLGAEMGRPSWLPVPDFALKAVLGEGASVVLEGQKVVPTR 326

Query: 307 AKELGFPFKYRYVKDALKAIMS 328
           AKELGF +KY  VKDALK+I+S
Sbjct: 327 AKELGFSYKYPSVKDALKSILS 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808106|ref|NP_001241963.1| uncharacterized protein LOC100813590 [Glycine max] gi|255639021|gb|ACU19811.1| unknown [Glycine max]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/322 (77%), Positives = 280/322 (86%), Gaps = 3/322 (0%)

Query: 7   KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 66
           + F V+C SD   K ++M +SVTGATGFIGRRLVQRL ADNH V VLTRS+S AE IFP 
Sbjct: 32  RSFSVWCVSDQDPKGNKMIISVTGATGFIGRRLVQRLHADNHSVHVLTRSKSNAETIFPA 91

Query: 67  KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 126
           K    FPG+ IAEEP+W+D IQGST VVNLAG PI TRWS EIKKEIK+SRIRVTSKVV+
Sbjct: 92  KD---FPGIKIAEEPEWKDSIQGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVE 148

Query: 127 LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDV 186
           LIN +P+ +RP V VSATA+GYY TSET+VFDE SPSG DYLAEVCREWE TALKVN  V
Sbjct: 149 LINSAPDDIRPKVFVSATAVGYYSTSETQVFDEQSPSGKDYLAEVCREWESTALKVNGGV 208

Query: 187 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 246
           R+ALIRIG+VLGKDGGALAKMIP+F +FAGGPLGSG QWFSWIHL+DIVNLIYE LSNPS
Sbjct: 209 RVALIRIGVVLGKDGGALAKMIPMFKLFAGGPLGSGTQWFSWIHLEDIVNLIYETLSNPS 268

Query: 247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 306
           Y+GVINGTAPNPVRLAE+CD LG+ LGRPSWLPVP+FALKAVLGEGA VVLEGQ+V+P +
Sbjct: 269 YKGVINGTAPNPVRLAELCDQLGHALGRPSWLPVPDFALKAVLGEGATVVLEGQKVLPTQ 328

Query: 307 AKELGFPFKYRYVKDALKAIMS 328
           AK+LGFPFKY YVKDAL+AI+S
Sbjct: 329 AKKLGFPFKYSYVKDALQAILS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519265|gb|AFK47694.1| unknown [Lotus japonicus]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/324 (76%), Positives = 284/324 (87%), Gaps = 3/324 (0%)

Query: 5   EAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 64
           E + FRV+C+SD +   +QM +SVTGATGFIGRRLVQ+L A+NH V VLTRS+SKAELIF
Sbjct: 29  EGRSFRVWCSSDQSSMGNQMIISVTGATGFIGRRLVQKLHAENHGVHVLTRSKSKAELIF 88

Query: 65  PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKV 124
           P K    FPG+ IAEE +W++ IQGST VVNLAG PI TRWSSEIKKEIK+SRIRVTSKV
Sbjct: 89  PVKD---FPGIKIAEESEWKNSIQGSTGVVNLAGLPISTRWSSEIKKEIKQSRIRVTSKV 145

Query: 125 VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK 184
            +LIN +P+ +RP V VSATA+GYYGTSET+VFDE SPSGNDYLAEVCREWE TAL+VN 
Sbjct: 146 AELINSAPDDIRPKVFVSATAVGYYGTSETQVFDEQSPSGNDYLAEVCREWESTALRVNG 205

Query: 185 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 244
           DVR+ALIRIG+VLGK+GGALAKMIPLF MFAGGPLGSG QWFSWIHLDDIV+LIYEAL N
Sbjct: 206 DVRVALIRIGVVLGKEGGALAKMIPLFKMFAGGPLGSGNQWFSWIHLDDIVDLIYEALRN 265

Query: 245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVP 304
           PSY+GVINGTAPNPVR AE+C  LG+V+GRPSWLPVP+ ALKAVLGEGA VVLEGQ+V+P
Sbjct: 266 PSYKGVINGTAPNPVRFAELCVQLGHVMGRPSWLPVPDIALKAVLGEGAAVVLEGQKVLP 325

Query: 305 ARAKELGFPFKYRYVKDALKAIMS 328
            +AK+LGF FKY YVKDALKAI+S
Sbjct: 326 TQAKKLGFAFKYSYVKDALKAILS 349

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
TAIR|locus:2050090	347	SULA [Arabidopsis thaliana (ta	0.960	0.907	0.803	3.6e-137
UNIPROTKB|P77775	297	yfcH "conserved protein with N	0.896	0.989	0.408	5.3e-56
UNIPROTKB|Q60BH9	300	MCA0496 "Putative uncharacteri	0.890	0.973	0.394	1.2e-51
UNIPROTKB|Q81YW5	301	BAS0486 "Cell division inhibit	0.899	0.980	0.370	4e-51
TIGR_CMR|BA_0515	301	BA_0515 "cell division inhibit	0.899	0.980	0.370	4e-51
UNIPROTKB|Q8ED48	296	yfcH "Predicted nucleoside-dip	0.896	0.993	0.379	5.8e-50
TIGR_CMR|SO_2922	296	SO_2922 "conserved hypothetica	0.896	0.993	0.379	5.8e-50
UNIPROTKB|Q4K6B2	302	PFL_5142 "Uncharacterized prot	0.890	0.966	0.403	2e-49
UNIPROTKB|Q47V18	296	CPS_4710 "Putative uncharacter	0.890	0.986	0.364	6e-48
TIGR_CMR|CPS_4710	296	CPS_4710 "conserved hypothetic	0.890	0.986	0.364	6e-48

TAIR|locus:2050090 SULA [Arabidopsis thaliana (taxid:3702)]

 Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
 Identities = 258/321 (80%), Positives = 286/321 (89%)

Query:     7 KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 66
             ++F V C+S   QK SQMTVSVTGATGFIGRRLVQRL+ADNH +RVLTRS+SKAE IFP 
Sbjct:    32 RRFMVLCSS---QKESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPA 88

Query:    67 KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 126
             K    FPG++IAEE +W++C+QGSTAVVNLAG PI TRWS EIKKEIK SRIRVTSKVVD
Sbjct:    89 KD---FPGIVIAEESEWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVD 145

Query:   127 LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDV 186
             LIN SP   RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDV
Sbjct:   146 LINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDV 205

Query:   187 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 246
             R+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPS
Sbjct:   206 RVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPS 265

Query:   247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 306
             Y+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P R
Sbjct:   266 YKGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVR 325

Query:   307 AKELGFPFKYRYVKDALKAIM 327
             AKELGF FKY+YVKDAL+AIM
Sbjct:   326 AKELGFEFKYKYVKDALRAIM 346

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

UNIPROTKB|P77775 yfcH "conserved protein with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 125/306 (40%), Positives = 182/306 (59%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
             M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++   
Sbjct:     1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56

Query:    84 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
                + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S     PSVL+S
Sbjct:    57 ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASD--TPPSVLIS 111

Query:   143 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 201
              +A GYYG     V  E  P  N++  ++C  WE  A +   D  R+ L+R G+VL  DG
Sbjct:   112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171

Query:   202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
             G L KM+P F +  GGP+GSG+Q+ +WIH+DD+VN I   L N   RG  N  +P PVR 
Sbjct:   172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230

Query:   262 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 321
              +    LG+ L RP+ L VP  A++ ++GE + +VL GQR +P R +E GF F++  +++
Sbjct:   231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290

Query:   322 ALKAIM 327
             AL  ++
Sbjct:   291 ALADVV 296

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q60BH9 MCA0496 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 120/304 (39%), Positives = 174/304 (57%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQ 82
             M + VTG TGFIGR L +RL    H++ VL+R          G+     P   I    PQ
Sbjct:     1 MHLLVTGGTGFIGRSLCRRLLERGHRLTVLSRQAPDTVRRLCGETV--MPVAAIDSLSPQ 58

Query:    83 WRDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 141
                   G  AVVNLAG PI   RW+   K+ + ESR+ +T+ +VD I  +    +P VL+
Sbjct:    59 -----AGFDAVVNLAGEPIADKRWTEARKRLLWESRVGLTTALVDYIARAES--KPPVLI 111

Query:   142 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV-NKDVRLALIRIGIVLGKD 200
             S +A+GYYG     + DE S  G+ +   +C  WE  A +     VR+ ++R G+V+G++
Sbjct:   112 SGSAVGYYGNRGDTLLDEESAHGDGFGHRLCAAWEEAASRAAGHGVRVCMLRTGLVVGRN 171

Query:   201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 260
             GG L +M+PLF +  GG +G G+QW SWIHLDD + +    + +    G  N TAPNPV 
Sbjct:   172 GGFLQRMLPLFRLGLGGRIGEGRQWMSWIHLDDHIAITEYLIEDAHLEGAFNATAPNPVT 231

Query:   261 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
               E  + L  +L RP+ LPVP F L+  LGE A ++L GQRV+P R ++  F F+Y +++
Sbjct:   232 NREFTECLARLLNRPAPLPVPAFTLRLALGETAELLLGGQRVIPKRLQQEPFRFRYEHLE 291

Query:   321 DALK 324
             +AL+
Sbjct:   292 NALR 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81YW5 BAS0486 "Cell division inhibitor-like protein" [Bacillus anthracis (taxid:1392)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 114/308 (37%), Positives = 175/308 (56%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 82
             M ++++G TGFIG  L        + V +LTR ++  E   P  +  ++ P +     P 
Sbjct:     1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56

Query:    83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
                 +     V+NLAG  I +RW+ + KK I  SRI+ T  ++  +   P   +P   ++
Sbjct:    57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTFIN 110

Query:   143 ATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 200
             A+A+GYYGTSETE F E   + GND+LA     WE  A K     +R    R G++LG D
Sbjct:   111 ASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPD 170

Query:   201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 260
             GGAL KM+  +  + GG +GSG+QW SWIH+DD+ ++I   +      G +N TAP P+R
Sbjct:   171 GGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIR 230

Query:   261 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
             +    + +  ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ + +  + 
Sbjct:   231 MKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTID 290

Query:   321 DALKAIMS 328
              AL+ I+S
Sbjct:   291 HALQNILS 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_0515 BA_0515 "cell division inhibitor-like protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 114/308 (37%), Positives = 175/308 (56%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 82
             M ++++G TGFIG  L        + V +LTR ++  E   P  +  ++ P +     P 
Sbjct:     1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56

Query:    83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
                 +     V+NLAG  I +RW+ + KK I  SRI+ T  ++  +   P   +P   ++
Sbjct:    57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTFIN 110

Query:   143 ATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 200
             A+A+GYYGTSETE F E   + GND+LA     WE  A K     +R    R G++LG D
Sbjct:   111 ASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPD 170

Query:   201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 260
             GGAL KM+  +  + GG +GSG+QW SWIH+DD+ ++I   +      G +N TAP P+R
Sbjct:   171 GGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIR 230

Query:   261 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
             +    + +  ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ + +  + 
Sbjct:   231 MKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTID 290

Query:   321 DALKAIMS 328
              AL+ I+S
Sbjct:   291 HALQNILS 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8ED48 yfcH "Predicted nucleoside-diphosphate sugar epimerase YfcH" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 116/306 (37%), Positives = 181/306 (59%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
             M + +TGA+GFIG++LV  L A+ H++ +LTR       +  G + ++   +   +E   
Sbjct:     1 MKILITGASGFIGQQLVAHL-ANQHELLLLTRHPGSIRQLL-GPQHQYLSSL---DEI-- 53

Query:    84 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
              D +    AV+NLAG PI   RWS++ K+ I +SR  +T+++  LI +S     P V++S
Sbjct:    54 -DDLNHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNP--PQVMIS 110

Query:   143 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 202
              +A+G+YG       DE +   +++  ++C+EWE  ALK     R+ ++R GIVLG  GG
Sbjct:   111 GSAIGFYGRQGAIPIDEHAVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLGH-GG 169

Query:   203 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 262
             ALAKM+P F +  GGP+G G+Q  SWIH+ D+V LI   L +    G+ N TAP PV   
Sbjct:   170 ALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNT 229

Query:   263 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 322
             E    LG VL RP+++  P   L+  +GE A ++ EGQ V+P  A + GF F++  ++ A
Sbjct:   230 EFSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPA 289

Query:   323 LKAIMS 328
             LK +++
Sbjct:   290 LKDLLA 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_2922 SO_2922 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 116/306 (37%), Positives = 181/306 (59%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
             M + +TGA+GFIG++LV  L A+ H++ +LTR       +  G + ++   +   +E   
Sbjct:     1 MKILITGASGFIGQQLVAHL-ANQHELLLLTRHPGSIRQLL-GPQHQYLSSL---DEI-- 53

Query:    84 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
              D +    AV+NLAG PI   RWS++ K+ I +SR  +T+++  LI +S     P V++S
Sbjct:    54 -DDLNHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNP--PQVMIS 110

Query:   143 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 202
              +A+G+YG       DE +   +++  ++C+EWE  ALK     R+ ++R GIVLG  GG
Sbjct:   111 GSAIGFYGRQGAIPIDEHAVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLGH-GG 169

Query:   203 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 262
             ALAKM+P F +  GGP+G G+Q  SWIH+ D+V LI   L +    G+ N TAP PV   
Sbjct:   170 ALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNT 229

Query:   263 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 322
             E    LG VL RP+++  P   L+  +GE A ++ EGQ V+P  A + GF F++  ++ A
Sbjct:   230 EFSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPA 289

Query:   323 LKAIMS 328
             LK +++
Sbjct:   290 LKDLLA 295

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q4K6B2 PFL_5142 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 123/305 (40%), Positives = 175/305 (57%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
             M + +TG TG IGR L +  QA  HQ+ V TR   K   +  G + R    V   +E   
Sbjct:     1 MHILLTGGTGLIGRALCRHWQAQGHQLSVWTRQPDKVAALC-GPQVR---AVKTLQE--- 53

Query:    84 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
              D I    AV+NLAG PI  R WS + K  +  SRI +T  ++  + ES E  +P VLVS
Sbjct:    54 LDQIPVD-AVINLAGAPIADRPWSHKRKALLWHSRIALTETLLAWL-ESREH-KPGVLVS 110

Query:   143 ATALGYYGTS-ETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 200
              +A+G+YG   E E+ ++S P   D+ +++C  WE TA +     VR+ L+R G+VL  +
Sbjct:   111 GSAVGWYGDGGERELSEDSPPVNEDFASQLCIAWEETAQRAEAMGVRVVLVRTGLVLSPE 170

Query:   201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 260
             GG L++++  F +  GGP+G+G+QW  WIH+DD + LI   +  P  +G  N  AP PVR
Sbjct:   171 GGFLSRLLLPFKLGLGGPIGNGRQWMPWIHIDDQIALIDFLVHQPGAQGPYNACAPKPVR 230

Query:   261 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
               E    LG VL RP+ +P+P F L+  LGE + ++L GQR VPAR  E GF F++  + 
Sbjct:   231 NREFAKTLGRVLHRPALIPLPAFFLRLALGELSLLLLGGQRAVPARLLEAGFTFQFTDLP 290

Query:   321 DALKA 325
              AL A
Sbjct:   291 AALDA 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q47V18 CPS_4710 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 112/307 (36%), Positives = 170/307 (55%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
             M + VTG TG IGR  +       +Q  VLTR+  KA+L  P K   F   +    E  +
Sbjct:     1 MKILVTGGTGLIGRHFISAFN-HKYQFTVLTRNTQKAQLYLP-KNIEFIEQL---PEQNY 55

Query:    84 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
              D I      +NLAG PI   RWS   K+ I +SR  +T K+V++I  + +  +PS L+S
Sbjct:    56 FDVI------INLAGEPIIDKRWSRAQKENICQSRWNITEKIVEMIARATD--KPSCLIS 107

Query:   143 ATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
              +A+GYYG T      +++  + +D+   +C++WE  ALK  +  R+ L+R GIVL  DG
Sbjct:   108 GSAIGYYGETGAVSTHEDAKVTHSDFAHTLCQKWEELALKAKEHCRVVLLRTGIVLASDG 167

Query:   202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
             GAL KM   F +  GG LG+GQQ+ SWIH+DD+++ I+ ++      G IN T+P  +  
Sbjct:   168 GALEKMRLPFSLGLGGKLGNGQQYMSWIHIDDMIHAIHFSVQIKCIEGAINCTSPKAITN 227

Query:   262 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 321
                   LG  + RP+W  VP F L  ++G+GA ++L  Q + P +    GF F +  ++ 
Sbjct:   228 EVFTKALGKEVNRPTWFSVPAFVLNILMGQGAELLLTSQNIYPQKLLSHGFHFNHSDIEH 287

Query:   322 ALKAIMS 328
             AL  +M+
Sbjct:   288 ALADLMT 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_4710 CPS_4710 "conserved hypothetical protein TIGR01777" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 112/307 (36%), Positives = 170/307 (55%)

Query:    24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
             M + VTG TG IGR  +       +Q  VLTR+  KA+L  P K   F   +    E  +
Sbjct:     1 MKILVTGGTGLIGRHFISAFN-HKYQFTVLTRNTQKAQLYLP-KNIEFIEQL---PEQNY 55

Query:    84 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
              D I      +NLAG PI   RWS   K+ I +SR  +T K+V++I  + +  +PS L+S
Sbjct:    56 FDVI------INLAGEPIIDKRWSRAQKENICQSRWNITEKIVEMIARATD--KPSCLIS 107

Query:   143 ATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
              +A+GYYG T      +++  + +D+   +C++WE  ALK  +  R+ L+R GIVL  DG
Sbjct:   108 GSAIGYYGETGAVSTHEDAKVTHSDFAHTLCQKWEELALKAKEHCRVVLLRTGIVLASDG 167

Query:   202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
             GAL KM   F +  GG LG+GQQ+ SWIH+DD+++ I+ ++      G IN T+P  +  
Sbjct:   168 GALEKMRLPFSLGLGGKLGNGQQYMSWIHIDDMIHAIHFSVQIKCIEGAINCTSPKAITN 227

Query:   262 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 321
                   LG  + RP+W  VP F L  ++G+GA ++L  Q + P +    GF F +  ++ 
Sbjct:   228 EVFTKALGKEVNRPTWFSVPAFVLNILMGQGAELLLTSQNIYPQKLLSHGFHFNHSDIEH 287

Query:   322 ALKAIMS 328
             AL  +M+
Sbjct:   288 ALADLMT 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8CPY7	Y553_STAES	No assigned EC number	0.3387	0.8689	0.9531	yes	no
Q2YSF6	Y724_STAAB	No assigned EC number	0.3398	0.8810	0.9633	yes	no
P71373	Y1208_HAEIN	No assigned EC number	0.3594	0.8810	0.9763	yes	no
Q5M8N4	D39U1_MOUSE	No assigned EC number	0.3439	0.8658	0.9220	yes	no
P67232	Y2216_MYCTU	No assigned EC number	0.3366	0.8780	0.9568	yes	no
P67233	Y2239_MYCBO	No assigned EC number	0.3366	0.8780	0.9568	yes	no
Q6GB61	Y734_STAAS	No assigned EC number	0.3344	0.8780	0.96	yes	no
O32960	Y860_MYCLE	No assigned EC number	0.3516	0.8902	0.9511	yes	no
Q5HHP9	Y834_STAAC	No assigned EC number	0.3344	0.8780	0.96	yes	no
Q6GIM1	Y825_STAAR	No assigned EC number	0.3431	0.8810	0.9633	yes	no
Q17QH8	D39U1_BOVIN	No assigned EC number	0.3472	0.8780	0.9795	yes	no
Q7A6Q5	Y724_STAAN	No assigned EC number	0.3344	0.8780	0.96	yes	no
Q99VK8	Y769_STAAM	No assigned EC number	0.3344	0.8780	0.96	yes	no
Q5HQV8	Y438_STAEQ	No assigned EC number	0.3387	0.8689	0.9531	yes	no
Q2G035	Y792_STAA8	No assigned EC number	0.3344	0.8780	0.96	yes	no
Q8NXL7	Y731_STAAW	No assigned EC number	0.3344	0.8780	0.96	yes	no
O31574	YFHF_BACSU	No assigned EC number	0.3517	0.9024	0.9768	yes	no
Q49VZ4	Y1921_STAS1	No assigned EC number	0.3376	0.8658	0.9530	yes	no
Q4L4J7	Y2119_STAHJ	No assigned EC number	0.3388	0.8780	0.9632	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_IX0405	hypothetical protein (350 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_IV3806	hypothetical protein (326 aa)							•		0.491
	eugene3.01270014	hypothetical protein (503 aa)	•								0.450
	gw1.2059.13.1	annotation not avaliable (156 aa)							•		0.427
	eugene3.28270001	Predicted protein (235 aa)	•								0.416
	estExt_fgenesh4_pm.C_LG_XII0400	hypothetical protein (274 aa)				•			•		0.404
	gw1.19427.3.1	hypothetical protein (361 aa)	•								0.403

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	328
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-134
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-132
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	1e-123
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-26
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	2e-19
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	7e-18
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	4e-17
pfam08338	48	pfam08338, DUF1731, Domain of unknown function (DU	6e-17
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-16
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	5e-16
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-13
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-11
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-11
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-10
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-10
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-09
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	5e-09
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	8e-08
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	4e-07
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	4e-07
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	3e-06
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	3e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-06
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-05
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	1e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	3e-05
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	4e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	9e-05
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	4e-04
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	5e-04
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	6e-04
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	7e-04
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	8e-04
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	8e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
pfam05368	232	pfam05368, NmrA, NmrA-like family	0.001
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	0.001
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	0.003
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.004
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.004
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	0.004

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score =  381 bits (982), Expect = e-134
 Identities = 139/301 (46%), Positives = 187/301 (62%), Gaps = 13/301 (4%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           + +TG TGFIGR L QRL    H+V +LTRS        P                +  D
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRS--------PPPGANTKWEGYKPWAGEDAD 52

Query: 86  CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 144
            ++G+ AV+NLAG PI   RW+ E K+EI++SRI  T  +V+ I  + +  +P V +SA+
Sbjct: 53  SLEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQ--KPKVFISAS 110

Query: 145 ALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGG 202
           A+GYYG SE   + E  SP+G+D+LAE+CR+WE  A        R+ L+R GIVLG  GG
Sbjct: 111 AVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGG 170

Query: 203 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 262
           ALAKM+  F +  GGPLGSG+QWFSWIH++D+V LI  AL N S  G +N TAP PVR  
Sbjct: 171 ALAKMLLPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASVSGPVNATAPEPVRNK 230

Query: 263 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 322
           E    L   L RP++ PVP F L+A+LGE A ++L+GQRV+P +  E GF F+Y  + +A
Sbjct: 231 EFAKALARALHRPAFFPVPAFVLRALLGEMAALLLKGQRVLPEKLLEAGFQFQYPDLDEA 290

Query: 323 L 323
           L
Sbjct: 291 L 291

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score =  378 bits (973), Expect = e-132
 Identities = 145/312 (46%), Positives = 190/312 (60%), Gaps = 25/312 (8%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 84
            + +TG TGFIGR L +RL A  H+V VL+R   KAE +              AE   W 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGL--------------AEVITWD 46

Query: 85  DC------IQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 137
                   + G+ AV+NLAG PI   RW+   KKEI  SRI  T  +V+ I  +P    P
Sbjct: 47  GLSLGPWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPA--PP 104

Query: 138 SVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIV 196
            VL+SA+A+GYYG S  EV  E+SPSG D+LAEVC+ WE  A   ++   R+ ++R G+V
Sbjct: 105 KVLISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAWEKAAQPASELGTRVVILRTGVV 164

Query: 197 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 256
           LG DGGAL KM+  F +  GGPLGSG+QW SWIH+DD+V LI  A+ NP   G +N  AP
Sbjct: 165 LGPDGGALPKMLLPFRLGLGGPLGSGRQWMSWIHIDDLVRLIEFAIENPDLSGPVNAVAP 224

Query: 257 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKELGFPFK 315
           NPV  AE    LG  L RP+ LPVP FALK   GE  A ++L+GQRV+P R  + GF F+
Sbjct: 225 NPVTNAEFTKALGRALHRPAGLPVPAFALKLGFGEMRAELLLKGQRVLPERLLDAGFQFR 284

Query: 316 YRYVKDALKAIM 327
           Y  +++AL+ ++
Sbjct: 285 YPDLEEALEELL 296

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score =  354 bits (911), Expect = e-123
 Identities = 141/305 (46%), Positives = 189/305 (61%), Gaps = 12/305 (3%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           + +TG TG IGR L  RL+   HQV +LTR   KA           + G+  A       
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-PNVTLWEGLADALT----- 54

Query: 86  CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 144
              G  AV+NLAG PI   RW+ + K+EI++SRI  T K+V+LI  S    +P VL+SA+
Sbjct: 55  --LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASET--KPKVLISAS 110

Query: 145 ALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGA 203
           A+GYYG S   V  E SP G+D+LA++C++WE  AL+  +   R+ L+R G+VL  DGGA
Sbjct: 111 AVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGA 170

Query: 204 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 263
           L KM+PLF +  GG LGSG+QWFSWIH++D+VN I   L N    G  N TAPNPVR  E
Sbjct: 171 LGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKE 230

Query: 264 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 323
               LG  L RP+ LPVP FAL+ +LGE A ++L GQRV+P + +  GF F+Y  +++AL
Sbjct: 231 FAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEAL 290

Query: 324 KAIMS 328
             I+ 
Sbjct: 291 ADILK 295

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  105 bits (264), Expect = 3e-26
 Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + VTG  GFIG  LV+RL A  H VR L R R   + +  G    F    +   +   
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV--EFVVLDLTDRDLVD 58

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
                   AV++LA        ++    E  +  +  T  +++       GV+  V  S+
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA--RAAGVKRFVFASS 116

Query: 144 TALGYYGTSETEVFDESSP---SGNDY-----LAE-VCREWEGTALKVNKDVRLALIRIG 194
            +   YG       DE        N Y      AE + R +          + + ++R  
Sbjct: 117 VS-VVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY-----GLPVVILRPF 170

Query: 195 IVLG----KDGGALAKMIPLFMMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSNPS 246
            V G     D  +      +  +  G P+    G G Q   ++++DD+ + +  AL NP 
Sbjct: 171 NVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD 230

Query: 247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 306
                 G+    + + E+ + +   +G  + L V               + EG+ +  ++
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI------PLGRRGDLREGKLLDISK 284

Query: 307 AK-ELGFPFKYRYVKDALKAIMS 328
           A+  LG+  K    ++ L   + 
Sbjct: 285 ARAALGWEPKVSL-EEGLADTLE 306

Length = 314

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 85.8 bits (213), Expect = 2e-19
 Identities = 69/288 (23%), Positives = 108/288 (37%), Gaps = 52/288 (18%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE---- 79
           M V+V GATGFIGR +V RL     QV V  R                   V+  E    
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE---AYARRLLVMGDLGQVLFVEFDLR 57

Query: 80  -EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 138
            +   R  ++GS  V+NL G    T+  S      ++  +    ++     E+  GV   
Sbjct: 58  DDESIRKALEGSDVVINLVGRLYETKNFS-----FEDVHVEGPERLAKAAKEA--GVERL 110

Query: 139 VLVSATALGYYGTSETEVFDESSPS--------GNDYLAEVCREWEGTALKVNKDVRLAL 190
           + +S  ALG          D +SPS        G + + E   E               +
Sbjct: 111 IHIS--ALGA---------DANSPSKYLRSKAEGEEAVREAFPEA-------------TI 146

Query: 191 IRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 248
           +R  +V G++   L +   +  F+ F     G GQ  F  +++ D+   I  AL +P   
Sbjct: 147 VRPSVVFGREDRFLNRFAKLLAFLPFPPLIGG-GQTKFQPVYVGDVAEAIARALKDPETE 205

Query: 249 GVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 294
           G       P    LAE+ + L  + GR    LP+P +  + +      
Sbjct: 206 GKTYELVGPKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKLL 253

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 82.4 bits (204), Expect = 7e-18
 Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 32/276 (11%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQ 82
            V VTGA GFIGR LV +L +   +VR+  R+   AE           P V++AE  +  
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAE-----------PSVVLAELPDID 49

Query: 83  WR-DCIQGSTAVVNLAG-TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
              D   G  AVV+LA    +     ++   + ++    +T ++        +GV+  V 
Sbjct: 50  SFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAAR--QGVKRFVF 107

Query: 141 VSA-TALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNKD--VRLALIRIGIV 196
           +S+    G         FDE   P+  D       E E   L++     + + ++R  +V
Sbjct: 108 LSSVKVNGEGTVGAP--FDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMV 165

Query: 197 LGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 255
            G    G  A+++ L       P G+ +   S + LD++V+ IY  +S P      NGT 
Sbjct: 166 YGPGVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLP---KAANGTF 222

Query: 256 ----PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALK 286
                 PV  AE+ D +   LG+P+  LPVP   L+
Sbjct: 223 LVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLR 258

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 77.4 bits (191), Expect = 4e-17
 Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           + + GATGFIGR L + L    H+V +L R+  +       ++        + +     D
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRL--SKEDQEPVAVVEGDLRDLDSLSD 58

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
            +QG   V++LAG P  TR       +  E  +  T  V++   E+  GV+  + +S+  
Sbjct: 59  AVQGVDVVIHLAGAPRDTR-------DFCEVDVEGTRNVLEAAKEA--GVKHFIFISSL- 108

Query: 146 LGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 205
            G YG    ++ +E+ PS +     V  + E    + +  +   ++R G++ G    A+A
Sbjct: 109 -GAYG----DLHEETEPSPSSPYLAVKAKTEAVLREAS--LPYTIVRPGVIYGDLARAIA 161

Query: 206 KMI 208
             +
Sbjct: 162 NAV 164

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|203914 pfam08338, DUF1731, Domain of unknown function (DUF1731)

 Score = 72.9 bits (180), Expect = 6e-17
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 280 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI 326
           VP FALK +LGE A ++LEGQRV+P +  E GF F+Y  ++DAL+ +
Sbjct: 1   VPAFALKLLLGEMAELLLEGQRVLPKKLLEAGFQFRYPTLEDALRDL 47

This domain of unknown function appears towards the C-terminus of proteins of the NAD dependent epimerase/dehydratase family (pfam01370) in bacteria, eukaryotes and archaea. Many of the proteins in which it is found are involved in cell-division inhibition. Length = 48

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 20/237 (8%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 87
           VTG TGFIG  LV+RL  + ++V VL R R              F    + +       +
Sbjct: 3   VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES---LNTGRIRFHEGDLTDPDALERLL 59

Query: 88  QGS--TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
                 AV++LA    G   S E   +   + +  T ++++    +  GV+  V  S++ 
Sbjct: 60  AEVQPDAVIHLAA-QSGVGASFEDPADFIRANVLGTLRLLEAARRA--GVKRFVFASSSE 116

Query: 146 LGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 202
           +  YG        E +P G  + Y  A++  E    A      +R  ++R+  V G    
Sbjct: 117 V--YGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPGNP 174

Query: 203 AL--AKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 252
                 +IP  +  +  G P   LG G Q   ++++DD+   I  AL +P    + N
Sbjct: 175 DPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGEIYN 231

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 76.2 bits (188), Expect = 5e-16
 Identities = 69/290 (23%), Positives = 104/290 (35%), Gaps = 43/290 (14%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           V + G  G++G+RL ++L A   QV   TRS  K     P       P  + A+  Q   
Sbjct: 1   VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAG---VTP--LAADLTQPGL 54

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
                  +V     P G           +         ++D + + P  V+  + +S+T 
Sbjct: 55  L-ADVDHLVISLPPPAG---------SYRGGYDPGLRALLDALAQLP-AVQRVIYLSST- 102

Query: 146 LGYYGTSETEVFDESSPSGNDYLAEVCR-EWEGTALKVNKDVRLALIRIGIVLGKD---G 201
            G YG  + E  DE+SP      +     E E   L +       ++R+  + G      
Sbjct: 103 -GVYGDQQGEWVDETSPPNPSTESGRALLEAEQALLALGS-KPTTILRLAGIYGPGRHPL 160

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
             LA+              +G    + IH+DD+V  +  AL  P+   V N     PV  
Sbjct: 161 RRLAQGTGR--------PPAGNAPTNRIHVDDLVGALAFALQRPAPGPVYNVVDDLPVTR 212

Query: 262 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG 311
            E       +LG    LP P F   A L        EG+RV   R K   
Sbjct: 213 GEFYQAAAELLG----LPPPPFIPFAFLR-------EGKRVSNDRLKAEL 251

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 50/219 (22%), Positives = 77/219 (35%), Gaps = 41/219 (18%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 87
           V GATG  GRRLV+ L A  HQV  L+R+ SKA    P           + +     + +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKD-LFDLADLAEAL 57

Query: 88  QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 147
            G  AVV+  G         +               ++D    +  GVR  V+VSA  L 
Sbjct: 58  AGVDAVVDAFGA-----RPDDSDG---------VKHLLDAAARA--GVRRIVVVSAAGL- 100

Query: 148 YYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALA 205
            Y         + +P    Y        +  A ++     +   ++R G +  ++G    
Sbjct: 101 -YRDEPGTFRLDDAPLFPPYAR-----AKAAAEELLRASGLDWTIVRPGALFDEEGETYE 154

Query: 206 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 244
                     G P G      S I   D+   + + L N
Sbjct: 155 I------GTEGDPAG-----ESSISRADVAAALLDELEN 182

Length = 182

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 57/241 (23%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           + VTG  GFIG  LV+RL    H+V V+ R                              
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
                  VV+LA    G   S +   E  E+ +  T  +++   ++  GV+  V  S +A
Sbjct: 31  ----LDVVVHLAALV-GVPASWDNPDEDFETNVVGTLNLLEAARKA--GVKRFVYAS-SA 82

Query: 146 LGYYGTSETEVFDESSPS-GNDY-----LAE-VCREWEGTALKVNKDVRLALIRIGIVLG 198
             Y         +E+ P   + Y      AE + R +       +  + + ++R+  V G
Sbjct: 83  SVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSY-----GESYGLPVVILRLANVYG 137

Query: 199 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVI 251
                 L  ++  F+     G PL   G G Q   +IH+DD+V  I  AL NP    GV 
Sbjct: 138 PGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVY 197

Query: 252 N 252
           N
Sbjct: 198 N 198

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 62.6 bits (152), Expect = 3e-11
 Identities = 63/272 (23%), Positives = 95/272 (34%), Gaps = 38/272 (13%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + VTGATGF+G  +V+ L A  H+VR   R+   A  +  G +        + +    
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVL---GDLRDPKSL 57

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
               +G   V+ ++G   G+             R    + VV     +  GV+    VS 
Sbjct: 58  VAGAKGVDGVLLISGLLDGSDA----------FRAVQVTAVVRAAEAAGAGVK--HGVSL 105

Query: 144 TALGYYGTSETEVFDESSPSGNDYLAEVCR--EWEGTALKVNKDVRLALIRIGIVLGKDG 201
           + LG    S + +            A V       G        +R A   +G       
Sbjct: 106 SVLGADAASPSALARA--------KAAVEAALRSSGIPYTT---LRRAAFYLGAGAAFIE 154

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTAPNPVR 260
            A A  +P+     G          S I +DD+   +  AL  P+  G       P  + 
Sbjct: 155 AAEAAGLPVIPRGIGR--------LSPIAVDDVAEALAAALDAPATAGRTYELAGPEALT 206

Query: 261 LAEMCDHLGNVLGRPSWL-PVPEFALKAVLGE 291
           LAE+   L   +GRP  L P    AL   L  
Sbjct: 207 LAELASGLDYTIGRPVGLIPEALAALTLALSG 238

Length = 275

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 56/296 (18%), Positives = 89/296 (30%), Gaps = 82/296 (27%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + + G T FIG+ LV+ L A  H V V  R R+K     P                  
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP--DLPEGVEHI------------ 46

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSK--------VVDLINESPEGV 135
                            +G R            R  +           VVD I  +P  V
Sbjct: 47  -----------------VGDR----------NDRDALEELLGGEDFDVVVDTIAYTPRQV 79

Query: 136 RPS-----------VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV-- 182
             +           + +S+ ++  Y      V  ES+P        +   W+    K   
Sbjct: 80  ERALDAFKGRVKQYIFISSASV--YLKP-GRVITESTPLREPDAVGLSDPWDYGRGKRAA 136

Query: 183 ------NKDVRLALIRIGIVLG--KDGGALAKMIPLFMMFAGGPL---GSGQQWFSWIHL 231
                        ++R   + G     G LA       +  G P+   G G     +IH+
Sbjct: 137 EDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFF--DRLARGRPILVPGDGHSLVQFIHV 194

Query: 232 DDIVNLIYEALSNP-SYRGVINGTAPNPVRLAEMCDHLGNVLGRPS---WLPVPEF 283
            D+   +  A  NP +  G+ N T    V   E+ +     LG+ +    +     
Sbjct: 195 KDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKALGKEAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----EPQ 82
           VTGATGF+G  LV+ L A  ++VR L RS S A L+           V + E        
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG-------LPVEVVEGDLTDAAS 55

Query: 83  WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
               ++G   V +LA     T   ++ +KE+  + +  T  V+D   E   GVR  V  S
Sbjct: 56  LAAAMKGCDRVFHLAAF---TSLWAKDRKELYRTNVEGTRNVLDAALE--AGVRRVVHTS 110

Query: 143 ATALGYYGTSETEVFDE-----SSPSGNDY 167
           + A    G       DE       P  NDY
Sbjct: 111 SIAA--LGGPPDGRIDETTPWNERPFPNDY 138

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 84
           V V GATG +GR +V+ L    +QVR L R  S+AE +           +  AE     
Sbjct: 1  KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLA-- 58

Query: 85 DCIQGSTAVVNLAGT 99
            ++G  AV++ AG+
Sbjct: 59 AALEGIDAVISAAGS 73

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 64/311 (20%), Positives = 109/311 (35%), Gaps = 36/311 (11%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           + VTGA G +GR L +RL A    + V    R +     P  K  +    +         
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPP--KVEYVRLDIRDPAAADVF 58

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLVSA 143
             + + AVV+LA            +   +  RI V  T  V+D    +  GV   V+ S+
Sbjct: 59  REREADAVVHLA------FILDPPRDGAERHRINVDGTQNVLDACAAA--GVPRVVVTSS 110

Query: 144 TALGYYGTSETEVFDESSPS-GNDYLAEVC--REWEG---TALKVNKDVRLALIRIGIVL 197
            A+            E +P  G+   A      E E       + + ++ + ++R   +L
Sbjct: 111 VAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170

Query: 198 GKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 255
           G          + P  +   GG        F ++H DD+   +  A+   +  G+ N   
Sbjct: 171 GPGTRNTTRDFLSPRRLPVPGGFDPP----FQFLHEDDVARALVLAVRAGA-TGIFNVAG 225

Query: 256 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL--------GEGAFVVLEGQRVVPARA 307
             PV L+ +   LG    RP  LP P  A  A                 L+   V+    
Sbjct: 226 DGPVPLSLVLALLG---RRPVPLPSPLPAALAAARRLGLRPLPPEQLDFLQYPPVMDTTR 282

Query: 308 KELGFPFKYRY 318
             +   ++ ++
Sbjct: 283 ARVELGWQPKH 293

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 35/301 (11%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQ 82
           M V VTGATGFIG  +V+ L A  H+V  L RS    A+L   G +     G +  E+  
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAGAQV--HRGDL--EDLD 56

Query: 83  -WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVL 140
             R     + AV++LA T        +   +       V  + ++ + E+  G  +P + 
Sbjct: 57  ILRKAAAEADAVIHLAFT-----HDFDNFAQA----CEVDRRAIEALGEALRGTGKPLIY 107

Query: 141 VSATALG--YYGTSETEVFDESSPSGNDYLAEVCREWEGTALK-VNKDVR-LALIRIGIV 196
            S   L     G  E E   +  P+            E  AL+   + VR   +    +V
Sbjct: 108 TSGIWLLGPTGGQEEDEEAPDDPPTPAAR-----AVSEAAALELAERGVRASVVRLPPVV 162

Query: 197 LGKDGGALAKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 251
            G+        +P+ +      G    +G G+  +  +H DD   L   AL       V 
Sbjct: 163 HGRGDHG---FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGSVY 219

Query: 252 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KEL 310
           +  A   + + ++ + +G  LG P  + +P     A  G  A  V   Q V   +  + L
Sbjct: 220 HAVAEEGIPVKDIAEAIGRRLGVPV-VSIPAEEAAAHFGWLAMFVALDQPVSSQKTRRRL 278

Query: 311 G 311
           G
Sbjct: 279 G 279

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 61/292 (20%), Positives = 99/292 (33%), Gaps = 43/292 (14%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE------- 80
           VTG TGF+GR LV+RL  +  +V VL RS S  E     ++       +   E       
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62

Query: 81  -----PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 135
                   R+       V++ A +     + +   ++   + I  T  V++L       +
Sbjct: 63  LGLSAAASRELAGKVDHVIHCAAS---YDFQAP-NEDAWRTNIDGTEHVLELAARL--DI 116

Query: 136 RPSVLVS--ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRI 193
           +    VS    A    G       +      N Y      E E         + L + R 
Sbjct: 117 QRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKA-EAEQLVRAAATQIPLTVYRP 175

Query: 194 GIVLG-KDGGALAKMIPL---FMMFAGGPLGSGQQWFSWIHLDDI--VNLI-----YEAL 242
            IV+G    G + K+  L     + A        +W   +  +    +NL+      +A+
Sbjct: 176 SIVVGDSKTGRIEKIDGLYELLNLLAKLG-----RWL-PMPGNKGARLNLVPVDYVADAI 229

Query: 243 SNPSYRGVING-----TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL 289
              S +   NG     T P P  L E+ D   +    P  L +      A L
Sbjct: 230 VYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEPNASL 281

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 68/287 (23%), Positives = 100/287 (34%), Gaps = 68/287 (23%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEE 80
           VTGATG IG ++   L      VR L RS  +A         +  G      P V+    
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVVGDLDD--PAVL---- 56

Query: 81  PQWRDCIQGSTAV---VNLAGTPIGTRW----SSEIKKEIKESRIRVTSKVVDL--INES 131
                 + G  AV      A T          +      ++E+ ++   +VV+L  +   
Sbjct: 57  ---AAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVK---RVVNLSSVGAD 110

Query: 132 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 191
           PE   PS L+    L      E +V + +       +              N   +   I
Sbjct: 111 PES--PSGLIRGHWL-----ME-QVLNWAGL---PVVHLRP-----AWFMENLLSQAPSI 154

Query: 192 RIGIVLGKDGGALAKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG- 249
           R             K   L + F G G L         I  DDI  +  + L +P + G 
Sbjct: 155 R-------------KAGVLALPFPGDGRLP-------PIATDDIARVAAKLLLDPEWHGH 194

Query: 250 -VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 294
            V   T P  + + E+   L  VLGRP  ++PVPE   +A L    F
Sbjct: 195 RVYELTGPEDLTMNEIAAALSRVLGRPVRYVPVPEEQWEATLLSLGF 241

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 55/253 (21%), Positives = 94/253 (37%), Gaps = 40/253 (15%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTR----FFPGVMI 77
            V VTGATGFI   +V++L    ++VR   RS SK+  +              F     +
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 78  AEEPQWRDCIQGSTAVVNLAG-TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
                W + ++G   V+++A   P       + + ++ +  +  T  V++    +   V+
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTG---PDAEDDVIDPAVEGTLNVLEAAKAAG-SVK 116

Query: 137 PSVLVSATA--LGYYGTSETEVFDESS------PSGNDYLA----EVCRE---WEGTALK 181
             VL S+ A           +VF E           N   A    +   E   WE   +K
Sbjct: 117 RVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWE--FVK 174

Query: 182 VNKD-VRLALIRIGIVLG-----KDGGALAKMIPLFMMFAGGPLGSGQQ--WFSWIHLDD 233
            NK    L  I  G VLG      +  +  ++I        G L +      F ++ + D
Sbjct: 175 ENKPKFELITINPGYVLGPSLLADELNSSNELI---NKLLDGKLPAIPPNLPFGYVDVRD 231

Query: 234 IVNLIYEALSNPS 246
           + +    AL +P 
Sbjct: 232 VADAHVRALESPE 244

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 21/34 (61%), Positives = 24/34 (70%)

Query: 26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 59
          V VTGATG++G RLV RL  + HQVR L RS  K
Sbjct: 1  VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEK 34

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 29/264 (10%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGK-KTRFFPGVMIAEEPQWRD 85
           VTG  GFIG  LV+RL    H+V VL   S  K E +   K   +F  G  I ++     
Sbjct: 4   VTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFIEG-DIRDDELVEF 62

Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
             +G   V + A        S  I+  IK+  + V   +  L      GV+   + ++++
Sbjct: 63  AFEGVDYVFHQAAQA-SVPRS--IEDPIKDHEVNVLGTLNLLEAARKAGVK-RFVYASSS 118

Query: 146 LGYYGTSETEVFDESSPSGND-------YLAEV-CREWEGTALKVNKDVRLALIRIGIVL 197
              YG       DE  P           Y  E+ C+ +     ++     ++L R   V 
Sbjct: 119 -SVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFA----RLYGLPTVSL-RYFNVY 172

Query: 198 GK---DGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG 249
           G      G  A +IP+F+     G P    G G+Q   + +++D+V     A +  +   
Sbjct: 173 GPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGAGGE 232

Query: 250 VINGTAPNPVRLAEMCDHLGNVLG 273
           V N        + E+ + +  +LG
Sbjct: 233 VYNIGTGKRTSVNELAELIREILG 256

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 61
          M V VTGATGF+G  +V+ L     +VRVL R  S   
Sbjct: 1  MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR 38

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 24 MTVSVTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAEL 62
          M   VTG TGFIGRRLV RL  +     V VL R +S + L
Sbjct: 1  MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRL 41

Length = 657

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 78
           TV VTGA+GFIG  LV RL    + VR   R      + K  L  PG  TR       +A
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLA 66

Query: 79  EEPQWRDCIQGSTAVVNLAGTPI 101
            E  + D I+G T V ++A TP+
Sbjct: 67  VEGSFDDAIRGCTGVFHVA-TPM 88

Length = 351

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 63/278 (22%), Positives = 95/278 (34%), Gaps = 53/278 (19%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM--IAEEPQW 83
           V + G  GFIG  LV  L  +  QVRV    RS      P     +  G     A+    
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRVF--DRSIPPYELPLGGVDYIKGDYENRAD---L 56

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
              + G   V++LA T   T  ++  K  I + +  V   V  L   +  G+   +  S 
Sbjct: 57  ESALVGIDTVIHLAST---TNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS- 112

Query: 144 TALGYYGTSETEVFDESSPS------------------------GNDYLAEVCREWE--G 177
           +    YG  E     ES P+                        G DY   V R     G
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYT--VLRISNPYG 170

Query: 178 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 237
              + +    +    I I L K    + +  P+         G G+    +I++DD+V  
Sbjct: 171 PGQRPDGKQGV----IPIALNK----ILRGEPI------EIWGDGESIRDYIYIDDLVEA 216

Query: 238 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 275
           +   L +     V N  +     LAE+   +  V GR 
Sbjct: 217 LMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRS 254

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 25  TVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
            +++ GATG +G  +V  L  +    V VLTR  S +   F     +  P V  A     
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVP-VDYASHESL 59

Query: 84  RDCIQGSTAVVNLAGTPI 101
              ++G  AV++  G   
Sbjct: 60  VAALKGVDAVISALGGAA 77

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 22/149 (14%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKT-RFFPG-VMIAE 79
            V VTGA GFIG  L +RL  + H+VR L    S      L         F  G V  A 
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 80  EPQWRDCIQGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESPEG 134
           E      ++    V +LA   I      T   S ++  +  +   + +  V         
Sbjct: 61  E--VEYLVKKCDVVFHLA-ALIAIPYSYTAPLSYVETNVFGTLNVLEAACV-------LY 110

Query: 135 VRPSVLVSATALGYYGTSETEVFDESSPS 163
            +  V  S + +  YGT++    DE  P 
Sbjct: 111 RKRVVHTSTSEV--YGTAQDVPIDEDHPL 137

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 28 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV 75
          VTGATG +G  +V+ L A    V  L R+  KA       K     GV
Sbjct: 3  VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------KAFAADGV 43

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 84
           T  V GA+G IGR + + L+     VR+++RS SK                M A      
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAW--LPGVEIVAADAMDAS--SVI 56

Query: 85  DCIQGSTAVVNLAGTPIGTRWS 106
              +G+  + + A  P  TRW 
Sbjct: 57  AAARGADVIYHCAN-PAYTRWE 77

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 61
          TV +TGATGF+G  L++ L   + Q +V+   R+ +E
Sbjct: 1  TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASE 37

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 31/133 (23%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + +TGA GFIG+ L+ RL+       +    R                    ++E + 
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKD-DDIFFYDRE-------------------SDESEL 40

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS- 142
            D +QG+  + +LAG     R   E   E +   + +T +++D +  +  G +P +L+S 
Sbjct: 41  DDFLQGADFIFHLAGV---NRPKDE--AEFESGNVGLTERLLDALTRN--GKKPPILLSS 93

Query: 143 ---ATALGYYGTS 152
              A     YG S
Sbjct: 94  SIQAALDNPYGKS 106

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 40.4 bits (94), Expect = 7e-04
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 40/257 (15%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTR---SRSKAE--LIFPGKKTR--FFPGVMIA 78
           V VTGA+G+I   +V+ L    + V+   R    R K E  L   G K R   F   ++ 
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLL- 66

Query: 79  EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 138
           EE  +   I+G  AV + A     T    + + E+ +  ++ T  V++   E+P  V+  
Sbjct: 67  EESSFEQAIEGCDAVFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPS-VKRV 123

Query: 139 VLVSATALGYY---GTSETEVFDE---SSPSGNDYLAEVCRE---W--------EGTALK 181
           +L S+TA   +        +V DE   S PS       +CRE   W        E  A +
Sbjct: 124 ILTSSTAAVLFRQPPIEANDVVDETFFSDPS-------LCRETKNWYPLSKILAENAAWE 176

Query: 182 VNKD--VRLALIRIGIVLGK-DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 238
             KD  + + ++  G + G      L   + L + F  G      +++ ++ + D+    
Sbjct: 177 FAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAH 236

Query: 239 YEALSNPSYRG--VING 253
            +AL  PS  G  +I+G
Sbjct: 237 IKALETPSANGRYIIDG 253

Length = 322

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 14/30 (46%), Positives = 22/30 (73%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
          M V +TGA+GF+G+RL +RL +D    R++
Sbjct: 1  MKVLITGASGFVGQRLAERLLSDVPNERLI 30

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 40.3 bits (94), Expect = 8e-04
 Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 46/266 (17%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG------VMIAE 79
           V VTGA+GF+   +V++L    ++VR   R  SK + +         PG        + +
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 80  EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 139
           E  + + I+G   V ++A TP+   +SS+   E+ +  I  T   +     +   V+  V
Sbjct: 61  EQSFDEVIKGCAGVFHVA-TPV--SFSSKDPNEVIKPAIGGTLNALKAAAAAKS-VKRFV 116

Query: 140 LVS--ATALGYYGTSETEVFDESSPSGNDYLAEVCRE-----W---------EGTALKVN 183
           L S   + L      E  V DE S +    L E   +     W         E  A K  
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWN----LEEFDSDPKKSAWVYAASKTLAEKAAWKFA 172

Query: 184 KDVRLALIRI------GIVLGKDGGA---LAKMIP---LFMMFAGGPLGSGQQWFSWIHL 231
            +  + LI +      G +   +  +    A  +      +  A   +  G     ++H+
Sbjct: 173 DENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGY----YVHV 228

Query: 232 DDIVNLIYEALSNPSYRGVINGTAPN 257
            DI       L  P  RG    TA N
Sbjct: 229 VDICLAHIGCLELPIARGRYICTAGN 254

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 28 VTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAE 61
          +TGATGF+G+ L+++L       ++  L R++    
Sbjct: 1  LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGES 36

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 63
          + V GATG+ G  +V+      H VR L R   K+EL 
Sbjct: 1  ILVFGATGYQGGSVVRASLKAGHPVRALVRD-PKSELA 37

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 28 VTGATGFIGRRLVQRL-QADNHQ-VRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQWR 84
          VTG  GF+GR +V+ L +    Q VRV       +    F   +   +    + ++   R
Sbjct: 2  VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDLR 61

Query: 85 DCIQGSTAVVNLAG 98
            +QGS  V++ A 
Sbjct: 62 RALQGSDVVIHTAA 75

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 38/251 (15%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTR---SRSKAELI--FPGKKTR--FFPGVMIA 78
           V VTGA+GFIG  LV+RL    + VR   R      K   +    G K R   F    + 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFK-ADLL 59

Query: 79  EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 138
           +   +   I G   V ++A +P+    S + ++E+ E  ++ T  V++   ++ + V+  
Sbjct: 60  DYGSFDAAIDGCDGVFHVA-SPV-DFDSEDPEEEMIEPAVKGTLNVLEACAKA-KSVKRV 116

Query: 139 VLV-SATALGYYGTSET-EVFDESSPSGNDYLAEVCREW-----------EGTALKVNKD 185
           V   S  A+ +       +V DES  S  D+    C++            E  A +  ++
Sbjct: 117 VFTSSVAAVVWNPNRGEGKVVDESCWSDLDF----CKKTKLWYALSKTLAEKAAWEFAEE 172

Query: 186 --VRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN---LI 238
             + L  +   +V+G        +    +  +  G          + +H+DD+ +   L+
Sbjct: 173 NGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILL 232

Query: 239 YEALSNPSYRG 249
           YE    PS  G
Sbjct: 233 YE---KPSASG 240

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 28 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 63
          +TGATG +GR LV+ L+   ++V    RSR+    +
Sbjct: 4  ITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL 39

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK 67
          TV VTGAT  IG  L  RL    HQV  + RS       FPG+
Sbjct: 5  TVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---FPGE 44

Length = 234

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGV 75
          +++  T  VTGATG+IG  LV+ L    + V    R  +K+  +      G + R F   
Sbjct: 7  ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRAD 66

Query: 76 MIAEEPQWRDCIQGSTAVVNLAGT 99
          +  EE  + + ++G   V ++A +
Sbjct: 67 L-QEEGSFDEAVKGCDGVFHVAAS 89

Length = 353

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	328
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02583	297	cinnamoyl-CoA reductase	99.98
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.98
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.98
PRK05865	854	hypothetical protein; Provisional	99.97
PLN02778	298	3,5-epimerase/4-reductase	99.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.94
PRK12320	699	hypothetical protein; Provisional	99.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.91
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.91
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.88
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.87
PLN03209	576	translocon at the inner envelope of chloroplast su	99.87
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.87
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.86
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.86
PRK09135	249	pteridine reductase; Provisional	99.85
PRK05875	276	short chain dehydrogenase; Provisional	99.85
PRK08263	275	short chain dehydrogenase; Provisional	99.85
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.85
PRK07067	257	sorbitol dehydrogenase; Provisional	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.84
PRK06180	277	short chain dehydrogenase; Provisional	99.84
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.83
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK06914	280	short chain dehydrogenase; Provisional	99.83
PRK07074	257	short chain dehydrogenase; Provisional	99.83
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.83
PRK07806	248	short chain dehydrogenase; Provisional	99.83
PRK07775	274	short chain dehydrogenase; Provisional	99.82
PRK12829	264	short chain dehydrogenase; Provisional	99.82
PRK07774	250	short chain dehydrogenase; Provisional	99.82
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.82
PRK06182	273	short chain dehydrogenase; Validated	99.82
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.81
PRK12746	254	short chain dehydrogenase; Provisional	99.81
PRK08219	227	short chain dehydrogenase; Provisional	99.81
PRK12828	239	short chain dehydrogenase; Provisional	99.81
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.8
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.8
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.8
PRK05876	275	short chain dehydrogenase; Provisional	99.8
PRK06128	300	oxidoreductase; Provisional	99.8
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.79
PRK12827	249	short chain dehydrogenase; Provisional	99.79
KOG2774	366	consensus NAD dependent epimerase [General functio	99.79
PRK09186	256	flagellin modification protein A; Provisional	99.79
PRK07060	245	short chain dehydrogenase; Provisional	99.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.79
PRK05993	277	short chain dehydrogenase; Provisional	99.79
PRK06179	270	short chain dehydrogenase; Provisional	99.79
PRK07890	258	short chain dehydrogenase; Provisional	99.79
PRK09134	258	short chain dehydrogenase; Provisional	99.78
PRK06138	252	short chain dehydrogenase; Provisional	99.78
PRK07577	234	short chain dehydrogenase; Provisional	99.78
PRK12939	250	short chain dehydrogenase; Provisional	99.78
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.78
PLN02253	280	xanthoxin dehydrogenase	99.77
PRK06194	287	hypothetical protein; Provisional	99.77
PRK06701	290	short chain dehydrogenase; Provisional	99.77
PRK06101	240	short chain dehydrogenase; Provisional	99.77
PRK06500	249	short chain dehydrogenase; Provisional	99.77
PRK10538	248	malonic semialdehyde reductase; Provisional	99.77
PRK06841	255	short chain dehydrogenase; Provisional	99.77
PRK05717	255	oxidoreductase; Validated	99.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.77
PRK07024	257	short chain dehydrogenase; Provisional	99.77
PRK06523	260	short chain dehydrogenase; Provisional	99.76
PRK12937	245	short chain dehydrogenase; Provisional	99.76
PRK08628	258	short chain dehydrogenase; Provisional	99.76
PRK07326	237	short chain dehydrogenase; Provisional	99.76
COG2910	211	Putative NADH-flavin reductase [General function p	99.76
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK06123	248	short chain dehydrogenase; Provisional	99.76
PRK06398	258	aldose dehydrogenase; Validated	99.76
PRK07825	273	short chain dehydrogenase; Provisional	99.76
PRK07856	252	short chain dehydrogenase; Provisional	99.76
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.75
PRK07985	294	oxidoreductase; Provisional	99.75
PRK09291	257	short chain dehydrogenase; Provisional	99.75
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.75
PRK07454	241	short chain dehydrogenase; Provisional	99.75
PRK12743	256	oxidoreductase; Provisional	99.75
PRK06196	315	oxidoreductase; Provisional	99.75
PRK06181	263	short chain dehydrogenase; Provisional	99.75
PRK05650	270	short chain dehydrogenase; Provisional	99.75
PRK06114	254	short chain dehydrogenase; Provisional	99.75
PRK05693	274	short chain dehydrogenase; Provisional	99.75
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.74
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK07478	254	short chain dehydrogenase; Provisional	99.74
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.74
PRK07063	260	short chain dehydrogenase; Provisional	99.74
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.74
PRK08643	256	acetoin reductase; Validated	99.74
PRK12744	257	short chain dehydrogenase; Provisional	99.74
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.74
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK06057	255	short chain dehydrogenase; Provisional	99.74
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.73
PRK12742	237	oxidoreductase; Provisional	99.73
PRK08264	238	short chain dehydrogenase; Validated	99.73
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK08324	681	short chain dehydrogenase; Validated	99.73
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.73
PRK12747	252	short chain dehydrogenase; Provisional	99.73
PRK07814	263	short chain dehydrogenase; Provisional	99.73
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.73
PRK08265	261	short chain dehydrogenase; Provisional	99.73
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.72
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.72
PRK05866	293	short chain dehydrogenase; Provisional	99.72
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.72
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.72
PRK06483	236	dihydromonapterin reductase; Provisional	99.72
PRK08267	260	short chain dehydrogenase; Provisional	99.72
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.71
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK06139	330	short chain dehydrogenase; Provisional	99.71
PRK07102	243	short chain dehydrogenase; Provisional	99.71
PRK08339	263	short chain dehydrogenase; Provisional	99.71
PRK06949	258	short chain dehydrogenase; Provisional	99.71
PRK07109	334	short chain dehydrogenase; Provisional	99.71
PRK08017	256	oxidoreductase; Provisional	99.71
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.71
PRK05867	253	short chain dehydrogenase; Provisional	99.71
PRK07035	252	short chain dehydrogenase; Provisional	99.71
PRK06172	253	short chain dehydrogenase; Provisional	99.71
PRK06198	260	short chain dehydrogenase; Provisional	99.71
PRK08589	272	short chain dehydrogenase; Validated	99.7
PRK09242	257	tropinone reductase; Provisional	99.7
PRK07904	253	short chain dehydrogenase; Provisional	99.7
PRK07041	230	short chain dehydrogenase; Provisional	99.7
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.7
PRK07578	199	short chain dehydrogenase; Provisional	99.7
PRK08251	248	short chain dehydrogenase; Provisional	99.7
PRK07069	251	short chain dehydrogenase; Validated	99.69
PRK08703	239	short chain dehydrogenase; Provisional	99.69
PRK08278	273	short chain dehydrogenase; Provisional	99.69
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.68
PRK08226	263	short chain dehydrogenase; Provisional	99.68
PRK07677	252	short chain dehydrogenase; Provisional	99.68
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.68
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.68
PRK07576	264	short chain dehydrogenase; Provisional	99.68
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK09072	263	short chain dehydrogenase; Provisional	99.68
PRK06197	306	short chain dehydrogenase; Provisional	99.68
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.68
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.67
PRK06484	520	short chain dehydrogenase; Validated	99.67
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.67
PRK07062	265	short chain dehydrogenase; Provisional	99.67
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.67
PRK07023	243	short chain dehydrogenase; Provisional	99.66
PRK05872	296	short chain dehydrogenase; Provisional	99.66
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK06953	222	short chain dehydrogenase; Provisional	99.66
PRK05884	223	short chain dehydrogenase; Provisional	99.66
PRK12367	245	short chain dehydrogenase; Provisional	99.66
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.66
PRK07831	262	short chain dehydrogenase; Provisional	99.66
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.65
PRK07832	272	short chain dehydrogenase; Provisional	99.65
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.65
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK06924	251	short chain dehydrogenase; Provisional	99.65
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.64
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.63
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.63
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.62
PRK08177	225	short chain dehydrogenase; Provisional	99.62
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.62
PRK06125	259	short chain dehydrogenase; Provisional	99.62
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.61
PRK07791	286	short chain dehydrogenase; Provisional	99.61
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.6
PRK05854	313	short chain dehydrogenase; Provisional	99.6
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.6
PRK06940	275	short chain dehydrogenase; Provisional	99.59
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.59
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.58
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.58
PRK07201	657	short chain dehydrogenase; Provisional	99.58
PLN02780	320	ketoreductase/ oxidoreductase	99.56
PRK06484	520	short chain dehydrogenase; Validated	99.54
PRK05599	246	hypothetical protein; Provisional	99.54
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.53
PRK05855	582	short chain dehydrogenase; Validated	99.53
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.53
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.49
PRK08303	305	short chain dehydrogenase; Provisional	99.48
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.46
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.46
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.45
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.45
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.45
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.44
PRK08862	227	short chain dehydrogenase; Provisional	99.43
PLN00015	308	protochlorophyllide reductase	99.41
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.38
KOG0725	270	consensus Reductases with broad range of substrate	99.37
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.36
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.36
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.32
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.31
COG1028	251	FabG Dehydrogenases with different specificities (	99.3
PTZ00325	321	malate dehydrogenase; Provisional	99.27
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.24
KOG1208	314	consensus Dehydrogenases with different specificit	99.23
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.23
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.22
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.22
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.17
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.13
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.1
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.99
PLN00106	323	malate dehydrogenase	98.98
PRK08309	177	short chain dehydrogenase; Provisional	98.95
PRK06720	169	hypothetical protein; Provisional	98.95
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.94
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.93
PRK05086	312	malate dehydrogenase; Provisional	98.78
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.73
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.66
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.65
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.62
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.62
PRK09620	229	hypothetical protein; Provisional	98.6
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.55
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.53
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.51
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.41
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.34
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.31
PRK14982	340	acyl-ACP reductase; Provisional	98.31
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.3
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.3
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.27
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.25
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.23
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.22
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.22
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.2
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.12
PRK05442	326	malate dehydrogenase; Provisional	98.12
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.11
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.08
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.05
COG3268	382	Uncharacterized conserved protein [Function unknow	98.03
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.03
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.01
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.99
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.98
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.97
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.94
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.92
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.9
PLN02602	350	lactate dehydrogenase	97.89
PRK06223	307	malate dehydrogenase; Reviewed	97.88
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.84
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.82
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.8
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.8
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.75
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.74
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.73
PF08338	48	DUF1731: Domain of unknown function (DUF1731); Int	97.73
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.69
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.68
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.68
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.66
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.66
PTZ00117	319	malate dehydrogenase; Provisional	97.66
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.66
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.64
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.61
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.59
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.58
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.58
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.54
PRK08655	437	prephenate dehydrogenase; Provisional	97.54
PLN02383	344	aspartate semialdehyde dehydrogenase	97.51
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.48
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.47
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.47
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.47
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.46
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.43
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.39
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.38
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.37
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.29
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.28
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.28
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.28
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.28
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.26
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.25
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.25
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.24
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.23
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	97.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.21
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	97.21
PRK07417	279	arogenate dehydrogenase; Reviewed	97.21
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.21
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.2
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.2
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.2
PRK09496	453	trkA potassium transporter peripheral membrane com	97.19
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.19
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.16
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.13
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.13
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.11
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.11
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.1
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.1
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.09
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.08
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.07
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.06
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.06
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.05
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	97.05
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	97.04
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.03
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.02
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.01
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	97.0
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.0
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.0
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.99
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.97
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.97
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.97
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.96
PRK09496	453	trkA potassium transporter peripheral membrane com	96.95
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.94
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.93
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.92
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.91
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.9
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.9
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.89
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.89
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.88
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.88
PRK04148	134	hypothetical protein; Provisional	96.88
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.85
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.85
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.84
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.84
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.83
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.83
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.82
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.8
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.79
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.79
PLN00203	519	glutamyl-tRNA reductase	96.74
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	96.72
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.72
PRK08328	231	hypothetical protein; Provisional	96.71
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.7
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.7
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.7
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.7
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.69
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.68
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.67
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.66
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.65
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.63
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.62
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.62
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.62
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.61
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.58
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.58
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.55
PLN02688	266	pyrroline-5-carboxylate reductase	96.51
PRK06444	197	prephenate dehydrogenase; Provisional	96.51
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.5
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.46
PRK08223	287	hypothetical protein; Validated	96.45
PLN02256	304	arogenate dehydrogenase	96.45
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.44
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.44
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.44
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	96.43
PLN02775	286	Probable dihydrodipicolinate reductase	96.43
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.43
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.43
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.42
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.42
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	96.4
PRK07574	385	formate dehydrogenase; Provisional	96.39
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.39
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.38
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
PRK08818	370	prephenate dehydrogenase; Provisional	96.36
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.34
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.33
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.32
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.31
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.3
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.3
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.3
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.3
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	96.27
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.26
PRK06849	389	hypothetical protein; Provisional	96.25
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.25
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.23
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.23
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.22
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.22
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	96.21
PRK07680	273	late competence protein ComER; Validated	96.21
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.21
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.2

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=100.00  E-value=1.6e-47  Score=305.17  Aligned_cols=292  Identities=48%  Similarity=0.827  Sum_probs=267.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-CCcEEEECCCCCCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPIGTR  104 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~~~~~~~  104 (328)
                      |+|||||||||++|+..|.+.||+|++++|++.+.......         .+..-+.+.+... ++|+|||+||.+....
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---------~v~~~~~~~~~~~~~~DavINLAG~~I~~r   71 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP---------NVTLWEGLADALTLGIDAVINLAGEPIAER   71 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---------cccccchhhhcccCCCCEEEECCCCccccc
Confidence            68999999999999999999999999999999877655432         1113344555555 7999999999876654


Q ss_pred             -CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhccc
Q 020254          105 -WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  183 (328)
Q Consensus       105 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  183 (328)
                       |..+..+.+.+.-+..|+.+++++.+  ...+.-+++|.+++++||...+..++|+.++.+.+.++.+.++|.+....+
T Consensus        72 rWt~~~K~~i~~SRi~~T~~L~e~I~~--~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~  149 (297)
T COG1090          72 RWTEKQKEEIRQSRINTTEKLVELIAA--SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQ  149 (297)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHh--ccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhh
Confidence             99999999999999999999999998  566677899999999999999999999999999999999999999888776


Q ss_pred             C-CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHH
Q 020254          184 K-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  262 (328)
Q Consensus       184 ~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~  262 (328)
                      . |.+++++|.|.|.++.++.+..+.+.++...|.+++++.++++|||++|+++++..++++....|.||++++.|++..
T Consensus       150 ~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~  229 (297)
T COG1090         150 QLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNK  229 (297)
T ss_pred             hcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHH
Confidence            5 899999999999999999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhhC
Q 020254          263 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       263 e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      +|...++++++++.++++|.+..+...|+........+++-++|+.+.||+++|++++++|+++++
T Consensus       230 ~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         230 EFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK  295 (297)
T ss_pred             HHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999874

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.3e-43  Score=281.41  Aligned_cols=288  Identities=22%  Similarity=0.260  Sum_probs=232.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+||||||+||||+|.+.+|++.||+|++++.-............ ..+...|+.|.+.+++.++  ++|+|||+||.. 
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~-   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAASI-   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcccc-
Confidence            689999999999999999999999999999997766554443310 1267789999999999996  799999999974 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC--CCCch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--~~~~y-~~k~~~~~~~~  178 (328)
                      .+..+...|..+++-|+.+|.+|++++++  .++++|||-||+.+  ||.+...|++|+.|  |.++| .+|+..|.+..
T Consensus        79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~--~gv~~~vFSStAav--YG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~  154 (329)
T COG1087          79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQ--TGVKKFIFSSTAAV--YGEPTTSPISETSPLAPINPYGRSKLMSEEILR  154 (329)
T ss_pred             ccchhhhCHHHHHhhchHhHHHHHHHHHH--hCCCEEEEecchhh--cCCCCCcccCCCCCCCCCCcchhHHHHHHHHHH
Confidence            34456678899999999999999999999  79999999999999  99999999999998  45678 99999999999


Q ss_pred             HhcccCCCeEEEEEeceEEcCCC--------cchhhhHHHH-HHHcCCC-----------CCCCCcccccccHHHHHHHH
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDG--------GALAKMIPLF-MMFAGGP-----------LGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~--------~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~i~v~D~a~~~  238 (328)
                      .+...+++++++||..++.|...        .....+++.. +...|+.           ..++...|++|||.|+|++.
T Consensus       155 d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH  234 (329)
T COG1087         155 DAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAH  234 (329)
T ss_pred             HHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHH
Confidence            99988899999999999999642        1235666655 3333332           15677889999999999999


Q ss_pred             HHHhhCCC---CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHH-HHCCCCc
Q 020254          239 YEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPF  314 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~p  314 (328)
                      +.+++.-.   ...+||+++|...|..|+++.+.++.|++.    |-.......|+.....     .+++|+ +.|||+|
T Consensus       235 ~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~i----p~~~~~RR~GDpa~l~-----Ad~~kA~~~Lgw~p  305 (329)
T COG1087         235 VLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDI----PVEIAPRRAGDPAILV-----ADSSKARQILGWQP  305 (329)
T ss_pred             HHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcC----ceeeCCCCCCCCceeE-----eCHHHHHHHhCCCc
Confidence            99886422   234999999999999999999999999663    3333333345544444     445556 5699999


Q ss_pred             ccccHHHHHHHh
Q 020254          315 KYRYVKDALKAI  326 (328)
Q Consensus       315 ~~~~~~~~l~~~  326 (328)
                      +++++++.+++.
T Consensus       306 ~~~~L~~ii~~a  317 (329)
T COG1087         306 TYDDLEDIIKDA  317 (329)
T ss_pred             ccCCHHHHHHHH
Confidence            997799999875

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=5.7e-42  Score=300.70  Aligned_cols=297  Identities=14%  Similarity=0.118  Sum_probs=217.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---------CCCccccCceeecCChhhHhhcCCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      .+|+|||||||||||++|+++|+++|++|++++|..........         ......+...|+.|.+.+.++++++|+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~   93 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY   93 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence            45799999999999999999999999999999986543211110         000111345789898899999999999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC--CCCch-HH
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LA  169 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--~~~~y-~~  169 (328)
                      |||+|+.... .....++....+.|+.++.+++++|++  .+++++||+||+++  ||.....+..|+.+  +.+.| .+
T Consensus        94 ViHlAa~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~v~~SS~~v--yg~~~~~~~~e~~~~~p~~~Y~~s  168 (348)
T PRK15181         94 VLHQAALGSV-PRSLKDPIATNSANIDGFLNMLTAARD--AHVSSFTYAASSST--YGDHPDLPKIEERIGRPLSPYAVT  168 (348)
T ss_pred             EEECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeechHh--hCCCCCCCCCCCCCCCCCChhhHH
Confidence            9999996432 223345677899999999999999999  68899999999999  99765556566554  34467 78


Q ss_pred             HHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHH
Q 020254          170 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       170 k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      |...|.....+....+++++++||+++|||++...   ..+++.+  +...++++   +++.+.++++|++|+|++++.+
T Consensus       169 K~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~  248 (348)
T PRK15181        169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLS  248 (348)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHH
Confidence            88888777766666799999999999999975322   2344433  34455554   6788899999999999999987


Q ss_pred             hhCCC---CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccc
Q 020254          242 LSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYR  317 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~  317 (328)
                      +....   .+++|||++++++|++|+++.+.+.++.......+.   ................++.+|+++ |||+|+++
T Consensus       249 ~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~s  325 (348)
T PRK15181        249 ATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA---EPIYKDFRDGDVKHSQADITKIKTFLSYEPEFD  325 (348)
T ss_pred             HhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCC---CcccCCCCCCcccccccCHHHHHHHhCCCCCCC
Confidence            76432   356999999999999999999999887431100000   000011111112235577888865 89999995


Q ss_pred             cHHHHHHHhh
Q 020254          318 YVKDALKAIM  327 (328)
Q Consensus       318 ~~~~~l~~~l  327 (328)
                       ++|+|++++
T Consensus       326 -l~egl~~~~  334 (348)
T PRK15181        326 -IKEGLKQTL  334 (348)
T ss_pred             -HHHHHHHHH
Confidence             999999976

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-41  Score=273.40  Aligned_cols=290  Identities=18%  Similarity=0.207  Sum_probs=230.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCccc-----ccCCCCCccccCceeecCChhhHhhcC--CCcEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV   94 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi   94 (328)
                      |++|||||+||||+++++.++++.  .+|+.++.-.-...     .+... ....+.+.|+.|.+.+.++++  ++|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~-~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS-PRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcC-CCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            689999999999999999999875  56788877443211     11111 112367889999999999998  699999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcc--cccCCCC--CCCch-H
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE--VFDESSP--SGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~--~~~e~~~--~~~~y-~  168 (328)
                      |+|+.++ ++-+-..++.+.+.|+.||.+|++++++  ... -+|+++||..|  ||+-...  .++|.+|  |.++| .
T Consensus        80 hfAAESH-VDRSI~~P~~Fi~TNv~GT~~LLEaar~--~~~~frf~HISTDEV--YG~l~~~~~~FtE~tp~~PsSPYSA  154 (340)
T COG1088          80 HFAAESH-VDRSIDGPAPFIQTNVVGTYTLLEAARK--YWGKFRFHHISTDEV--YGDLGLDDDAFTETTPYNPSSPYSA  154 (340)
T ss_pred             Eechhcc-ccccccChhhhhhcchHHHHHHHHHHHH--hcccceEEEeccccc--cccccCCCCCcccCCCCCCCCCcch
Confidence            9999875 4456677899999999999999999999  454 48999999999  9986654  5889888  45678 8


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhh
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      +|+........+...+|++++|.|+++-|||.. ...+++|..  +...|.++   |++.+.++|+||+|-++++..++.
T Consensus       155 SKAasD~lVray~~TYglp~~ItrcSNNYGPyq-fpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~  233 (340)
T COG1088         155 SKAASDLLVRAYVRTYGLPATITRCSNNYGPYQ-FPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT  233 (340)
T ss_pred             hhhhHHHHHHHHHHHcCCceEEecCCCCcCCCc-CchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence            899999999999998999999999999999975 334677755  66777775   999999999999999999999999


Q ss_pred             CCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHH---HHhcCcceeeecCcccCchHH-HHCCCCcccccH
Q 020254          244 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK---AVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYV  319 (328)
Q Consensus       244 ~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~lG~~p~~~~~  319 (328)
                      +...+++|||+++...+--|+++.|.+.+|++..-  -...+.   --+|....+     -++.+|+ ++|||.|+++ |
T Consensus       234 kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~--~~~li~~V~DRpGHD~RY-----aid~~Ki~~eLgW~P~~~-f  305 (340)
T COG1088         234 KGKIGETYNIGGGNERTNLEVVKTICELLGKDKPD--YRDLITFVEDRPGHDRRY-----AIDASKIKRELGWRPQET-F  305 (340)
T ss_pred             cCcCCceEEeCCCccchHHHHHHHHHHHhCccccc--hhhheEeccCCCCCccce-----eechHHHhhhcCCCcCCC-H
Confidence            98887899999999899999999999999986321  000111   112332333     3444554 7899999985 9


Q ss_pred             HHHHHHhhC
Q 020254          320 KDALKAIMS  328 (328)
Q Consensus       320 ~~~l~~~l~  328 (328)
                      +++|+++++
T Consensus       306 e~GlrkTv~  314 (340)
T COG1088         306 ETGLRKTVD  314 (340)
T ss_pred             HHHHHHHHH
Confidence            999999874

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=4.6e-40  Score=282.85  Aligned_cols=289  Identities=49%  Similarity=0.838  Sum_probs=218.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC-CC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-TR  104 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~-~~  104 (328)
                      |||||||||||+++++.|+++|++|++++|++.........       .++..+.+.+.+.+.++|+|||+|+.... ..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~   73 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-------GYKPWAPLAESEALEGADAVINLAGEPIADKR   73 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-------eeecccccchhhhcCCCCEEEECCCCCccccc
Confidence            69999999999999999999999999999988764432211       11111224556677899999999996532 23


Q ss_pred             CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC-CCchHHHHHHHHHHHHh-cc
Q 020254          105 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTAL-KV  182 (328)
Q Consensus       105 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~-~~~y~~k~~~~~~~~~~-~~  182 (328)
                      +........++.|+.+++++++++++  .++++.+++++++++.||.....+++|+.++ ...|..+.+.+++.... ..
T Consensus        74 ~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~  151 (292)
T TIGR01777        74 WTEERKQEIRDSRIDTTRALVEAIAA--AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAE  151 (292)
T ss_pred             CCHHHHHHHHhcccHHHHHHHHHHHh--cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhch
Confidence            45566778889999999999999999  5664444554444344997666678888743 33454554444443322 22


Q ss_pred             cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHH
Q 020254          183 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  262 (328)
Q Consensus       183 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~  262 (328)
                      +.+++++++||+.+||++.+....+...+....+.+++++++.+++||++|+|+++..+++.+...|+||++++++++++
T Consensus       152 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~  231 (292)
T TIGR01777       152 DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVRNK  231 (292)
T ss_pred             hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHH
Confidence            35899999999999999765444444333333344567788899999999999999999988666789999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHH
Q 020254          263 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  323 (328)
Q Consensus       263 e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l  323 (328)
                      |+++.+.+.+|.+..+.+|.+..+...+........+.+++++|++++||+|+|++++|++
T Consensus       232 di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       232 EFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             HHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence            9999999999988778899998877666655556678889999999999999998798864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.1e-39  Score=287.69  Aligned_cols=286  Identities=16%  Similarity=0.204  Sum_probs=210.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-cCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..|||||||||||||++|++.|+++|++|++++|....... ......   ...+++.+.|.++..+.++|+|||+|+..
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~~~~~D~ViHlAa~~  195 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG---NPRFELIRHDVVEPILLEVDQIYHLACPA  195 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc---CCceEEEECccccccccCCCEEEECceec
Confidence            35899999999999999999999999999999986432111 111000   12355666665666677899999999864


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC-----CC--CCch-HHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVC  172 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~-----~~--~~~y-~~k~~  172 (328)
                      ... ....++...++.|+.++.+++++|++  .+. ++||+||+++  ||.....+.+|+.     |.  .+.| .+|..
T Consensus       196 ~~~-~~~~~p~~~~~~Nv~gT~nLleaa~~--~g~-r~V~~SS~~V--Yg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~  269 (436)
T PLN02166        196 SPV-HYKYNPVKTIKTNVMGTLNMLGLAKR--VGA-RFLLTSTSEV--YGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  269 (436)
T ss_pred             cch-hhccCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECcHHH--hCCCCCCCCCccccccCCCCCCCCchHHHHHH
Confidence            222 22335678899999999999999998  554 8999999999  9976555666653     32  3457 77888


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .|.....+....+++++++||+++||++... ...++..+  +...++++   +++.+.++++|++|+++++..+++.. 
T Consensus       270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-  348 (436)
T PLN02166        270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-  348 (436)
T ss_pred             HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-
Confidence            8887777766678999999999999997431 12233322  33445553   67788999999999999999998764 


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHH
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA  325 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~  325 (328)
                      ..|+||+++++.+|++|+++.+.+.+|.+..+.....  .  .++     .....++++|+++ |||+|+++ ++++|++
T Consensus       349 ~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~--~--~~~-----~~~~~~d~~Ka~~~LGw~P~~s-l~egl~~  418 (436)
T PLN02166        349 HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPN--T--ADD-----PHKRKPDISKAKELLNWEPKIS-LREGLPL  418 (436)
T ss_pred             CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCC--C--CCC-----ccccccCHHHHHHHcCCCCCCC-HHHHHHH
Confidence            4679999999999999999999999997532221110  0  011     1234567788865 89999995 9999998


Q ss_pred             hh
Q 020254          326 IM  327 (328)
Q Consensus       326 ~l  327 (328)
                      ++
T Consensus       419 ~i  420 (436)
T PLN02166        419 MV  420 (436)
T ss_pred             HH
Confidence            76

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=9.8e-39  Score=284.36  Aligned_cols=297  Identities=19%  Similarity=0.259  Sum_probs=209.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCC-----CccccCceeecCChhhHhhcCCCcEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      .++|+|||||||||||++|++.|+++ |++|++++|+..+...+....     ....+...|+.|.+.+.++++++|+||
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            45689999999999999999999998 599999998765433322110     011244578989999999999999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC------------
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP------------  162 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~------------  162 (328)
                      |+|+......+. ..+.+....|+.++.+++++|++  .+ +++||+||.++  ||.....+.+|+.|            
T Consensus        92 HlAa~~~~~~~~-~~~~~~~~~n~~gt~~ll~aa~~--~~-~r~v~~SS~~v--Yg~~~~~~~~e~~p~~~~~~~~~~~e  165 (386)
T PLN02427         92 NLAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSE--NN-KRLIHFSTCEV--YGKTIGSFLPKDHPLRQDPAFYVLKE  165 (386)
T ss_pred             EcccccChhhhh-hChHHHHHHHHHHHHHHHHHHHh--cC-CEEEEEeeeee--eCCCcCCCCCcccccccccccccccc
Confidence            999964322222 23445567899999999999988  45 79999999998  98643322222211            


Q ss_pred             ------------CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc----------hhhhHHHH--HHHcCC
Q 020254          163 ------------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGG  217 (328)
Q Consensus       163 ------------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------~~~~~~~~--~~~~~~  217 (328)
                                  +.+.| .+|...|.....+...++++++++||++||||+...          ...++..+  ....+.
T Consensus       166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  245 (386)
T PLN02427        166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRE  245 (386)
T ss_pred             cccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCC
Confidence                        12347 778888877776666679999999999999997421          12333322  334555


Q ss_pred             CC---CCCCcccccccHHHHHHHHHHHhhCCC--CCceEEecCC-CccCHHHHHHHHHHHhCCCCCC--------CCcHH
Q 020254          218 PL---GSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWL--------PVPEF  283 (328)
Q Consensus       218 ~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~~i~~~-~~~~~~e~~~~i~~~~g~~~~~--------~~p~~  283 (328)
                      ++   +++.+.+++||++|+|++++.+++++.  .+++||++++ +.+++.|+++.+.+.+|.....        ..+..
T Consensus       246 ~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  325 (386)
T PLN02427        246 PLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSK  325 (386)
T ss_pred             CeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcc
Confidence            54   567788999999999999999998753  3459999997 5899999999999999852111        11110


Q ss_pred             HHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          284 ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      ..   .+. ..........+.+|+++ |||+|+++ ++++|+++++
T Consensus       326 ~~---~~~-~~~~~~~~~~d~~k~~~~lGw~p~~~-l~~gl~~~~~  366 (386)
T PLN02427        326 EF---YGE-GYDDSDKRIPDMTIINKQLGWNPKTS-LWDLLESTLT  366 (386)
T ss_pred             cc---cCc-cccchhhccCCHHHHHHhcCCCcCcc-HHHHHHHHHH
Confidence            00   000 00011223446677864 89999995 9999999863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.1e-38  Score=280.39  Aligned_cols=296  Identities=16%  Similarity=0.209  Sum_probs=209.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeec-CChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ||+|||||||||||++|+++|++. ||+|++++|+............ ..+...|+. +.+.+.++++++|+|||+|+..
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~   79 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPR-MHFFEGDITINKEWIEYHVKKCDVILPLVAIA   79 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCC-eEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence            479999999999999999999986 6999999987643332222111 124456886 5667778888999999999864


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC---------CCCch-HHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---------SGNDY-LAE  170 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~---------~~~~y-~~k  170 (328)
                      .. .....++....+.|+.++.+++++|++  .+ +++||+||+.+  ||.....+.+|+.+         +.+.| .+|
T Consensus        80 ~~-~~~~~~p~~~~~~n~~~~~~ll~aa~~--~~-~~~v~~SS~~v--yg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK  153 (347)
T PRK11908         80 TP-ATYVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTSEV--YGMCPDEEFDPEASPLVYGPINKPRWIYACSK  153 (347)
T ss_pred             Ch-HHhhcCcHHHHHHHHHHHHHHHHHHHh--cC-CeEEEEeccee--eccCCCcCcCccccccccCcCCCccchHHHHH
Confidence            22 222345677889999999999999998  55 79999999988  98655555555542         12357 778


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-------hhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHH
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...|.....+...++++++++||+++|||+...       ...+++.+  ....+.++   +++++.+++||++|+++++
T Consensus       154 ~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~  233 (347)
T PRK11908        154 QLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDAL  233 (347)
T ss_pred             HHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHH
Confidence            888877777766679999999999999997432       12334332  33455553   5678899999999999999


Q ss_pred             HHHhhCCC---CCceEEecCC-CccCHHHHHHHHHHHhCCCCCCCC---cHHHHH---H-HhcCcceeeecCcccCchHH
Q 020254          239 YEALSNPS---YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWLPV---PEFALK---A-VLGEGAFVVLEGQRVVPARA  307 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~-~~~~~~e~~~~i~~~~g~~~~~~~---p~~~~~---~-~~~~~~~~~~~~~~~~~~~~  307 (328)
                      +.++..+.   .+++||++++ ..+|++|+++.+.+.+|..+.+..   +.....   . ..+. ..........+.+|+
T Consensus       234 ~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~  312 (347)
T PRK11908        234 MKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGK-GYQDVQNRVPKIDNT  312 (347)
T ss_pred             HHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCc-CcchhccccCChHHH
Confidence            99998753   3569999997 579999999999999985422210   000000   0 0000 000111222345666


Q ss_pred             H-HCCCCcccccHHHHHHHhh
Q 020254          308 K-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       308 ~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      + .|||+|+++ ++++|++++
T Consensus       313 ~~~lGw~p~~~-l~~~l~~~~  332 (347)
T PRK11908        313 MQELGWAPKTT-MDDALRRIF  332 (347)
T ss_pred             HHHcCCCCCCc-HHHHHHHHH
Confidence            4 689999996 999999976

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3.7e-38  Score=261.77  Aligned_cols=292  Identities=23%  Similarity=0.282  Sum_probs=217.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc------cCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ++|+|+|||||||||++|++.|+++||.|++..|++.+...      +............|+.|++++++++++||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            56899999999999999999999999999999999987322      111111112446799999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeec-C--CCcccccCCCCCCC-------
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG-T--SETEVFDESSPSGN-------  165 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg-~--~~~~~~~e~~~~~~-------  165 (328)
                      +|.........  +..+..+.++.|+.+++++|++.+ .++|+|++||.+...+. +  .....++|+.+...       
T Consensus        85 ~Asp~~~~~~~--~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   85 TASPVDFDLED--PEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             eCccCCCCCCC--cHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            99975333222  455899999999999999999952 59999999997764333 1  22345777776432       


Q ss_pred             -ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 -DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 -~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       -| .+|...|...+.++.+.+++.+.+-|+.|+||...+  .......+....|..-...+....++||+|+|.+.+.+
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence             35 888888888888888889999999999999997543  22223333445553333344455699999999999999


Q ss_pred             hhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCC-CCcccccHH
Q 020254          242 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG-FPFKYRYVK  320 (328)
Q Consensus       242 ~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~p~~~~~~  320 (328)
                      ++.+...|.|.+.+.. .++.|+++.+.+.+..-.   +|...     .+..........++++|+++|| ++++  +++
T Consensus       242 ~E~~~a~GRyic~~~~-~~~~ei~~~l~~~~P~~~---ip~~~-----~~~~~~~~~~~~~~~~k~k~lg~~~~~--~l~  310 (327)
T KOG1502|consen  242 LEKPSAKGRYICVGEV-VSIKEIADILRELFPDYP---IPKKN-----AEEHEGFLTSFKVSSEKLKSLGGFKFR--PLE  310 (327)
T ss_pred             HcCcccCceEEEecCc-ccHHHHHHHHHHhCCCCC---CCCCC-----CccccccccccccccHHHHhcccceec--ChH
Confidence            9999989999998876 559999999999885432   22211     1111112233467889999998 6655  699


Q ss_pred             HHHHHhh
Q 020254          321 DALKAIM  327 (328)
Q Consensus       321 ~~l~~~l  327 (328)
                      +.+.+++
T Consensus       311 e~~~dt~  317 (327)
T KOG1502|consen  311 ETLSDTV  317 (327)
T ss_pred             HHHHHHH
Confidence            9998876

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.8e-38  Score=276.40  Aligned_cols=286  Identities=19%  Similarity=0.232  Sum_probs=209.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-----ccCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      .++|+||||||+||||++|+++|+++||+|++++|+.....     ..........+...|+.|.+.+.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            34679999999999999999999999999999999765321     1111000111345799999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc-cceeecCCCc---ccccCCCC--------C
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT-ALGYYGTSET---EVFDESSP--------S  163 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~-~v~~yg~~~~---~~~~e~~~--------~  163 (328)
                      +|+..      ...+...++.|+.++.+++++|++  .+++++|++||. ++  ||....   .+++|+++        +
T Consensus        88 ~A~~~------~~~~~~~~~~nv~gt~~ll~aa~~--~~v~r~V~~SS~~av--yg~~~~~~~~~~~E~~~~~~~~~~~p  157 (342)
T PLN02214         88 TASPV------TDDPEQMVEPAVNGAKFVINAAAE--AKVKRVVITSSIGAV--YMDPNRDPEAVVDESCWSDLDFCKNT  157 (342)
T ss_pred             ecCCC------CCCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeccceee--eccCCCCCCcccCcccCCChhhcccc
Confidence            99863      124577889999999999999998  688899999996 46  875332   24677642        2


Q ss_pred             CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch--hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .+.| .+|...|.....+....+++++++||++||||+....  ..+...+....+.....++..+++||++|+|++++.
T Consensus       158 ~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~  237 (342)
T PLN02214        158 KNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVL  237 (342)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHH
Confidence            3457 7888888888777666799999999999999975321  112222233444444334567899999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHH
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  320 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~  320 (328)
                      +++.+..+|.||++++ .+++.|+++.+.+.++..   .+|.....   +.  ........++++|+++|||+|+  +++
T Consensus       238 al~~~~~~g~yn~~~~-~~~~~el~~~i~~~~~~~---~~~~~~~~---~~--~~~~~~~~~d~~k~~~LG~~p~--~le  306 (342)
T PLN02214        238 VYEAPSASGRYLLAES-ARHRGEVVEILAKLFPEY---PLPTKCKD---EK--NPRAKPYKFTNQKIKDLGLEFT--STK  306 (342)
T ss_pred             HHhCcccCCcEEEecC-CCCHHHHHHHHHHHCCCC---CCCCCCcc---cc--CCCCCccccCcHHHHHcCCccc--CHH
Confidence            9988765679999874 689999999999998632   11211100   00  0011234577888888999995  699


Q ss_pred             HHHHHhh
Q 020254          321 DALKAIM  327 (328)
Q Consensus       321 ~~l~~~l  327 (328)
                      |+|++++
T Consensus       307 e~i~~~~  313 (342)
T PLN02214        307 QSLYDTV  313 (342)
T ss_pred             HHHHHHH
Confidence            9999986

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=7.2e-38  Score=280.19  Aligned_cols=285  Identities=18%  Similarity=0.205  Sum_probs=208.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..|||||||||||||++|++.|+++|++|++++|......... ....   ..++++.+.|.++.++.++|+|||+|+..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~~l~~~D~ViHlAa~~  194 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEPILLEVDQIYHLACPA  194 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc---CCceEEEECCccChhhcCCCEEEEeeeec
Confidence            4589999999999999999999999999999987543211110 0000   22356666666666677899999999864


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC-----CC--CCch-HHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVC  172 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~-----~~--~~~y-~~k~~  172 (328)
                      ... ....++...++.|+.++.+++++|++  .++ ++||+||+.+  ||.....+.+|+.     |.  .+.| .+|..
T Consensus       195 ~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~--~g~-r~V~~SS~~V--Yg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~  268 (442)
T PLN02206        195 SPV-HYKFNPVKTIKTNVVGTLNMLGLAKR--VGA-RFLLTSTSEV--YGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT  268 (442)
T ss_pred             chh-hhhcCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECChHH--hCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence            221 22335678889999999999999998  555 8999999999  9876555666653     22  3457 77877


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .|.....+....+++++++||+++|||+... ...++..+  ....++++   +++++.++++|++|+|++++.+++.. 
T Consensus       269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-  347 (442)
T PLN02206        269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-  347 (442)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-
Confidence            7777766665578999999999999997421 11223222  33444553   67788999999999999999998765 


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHHH
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALK  324 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~  324 (328)
                      ..|+||+++++.+++.|+++.+.+.+|.+..+. .|..     ..+     ......+++|++ .|||+|+++ ++|+|+
T Consensus       348 ~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~-----~~~-----~~~~~~d~sKa~~~LGw~P~~~-l~egl~  416 (442)
T PLN02206        348 HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT-----EDD-----PHKRKPDITKAKELLGWEPKVS-LRQGLP  416 (442)
T ss_pred             CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC-----CCC-----ccccccCHHHHHHHcCCCCCCC-HHHHHH
Confidence            467999999999999999999999998653221 1110     001     123456778885 589999995 999999


Q ss_pred             Hhh
Q 020254          325 AIM  327 (328)
Q Consensus       325 ~~l  327 (328)
                      +++
T Consensus       417 ~~~  419 (442)
T PLN02206        417 LMV  419 (442)
T ss_pred             HHH
Confidence            886

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.3e-37  Score=274.67  Aligned_cols=300  Identities=17%  Similarity=0.217  Sum_probs=211.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCccc--ccCC--CCCccccCceeecCChhhHhhcC--CCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAE--LIFP--GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~--~~~~--~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   95 (328)
                      ||+|||||||||||+++++.|+++|++++++ +|......  ....  ......+..+|+.|.+.+.++++  ++|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            4789999999999999999999999875544 44322111  0101  00011134579999999999887  4999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC-------CCCCCcEEEEecccceeecCCC--cccccCCCCC--C
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLVSATALGYYGTSE--TEVFDESSPS--G  164 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~~~v~~Ss~~v~~yg~~~--~~~~~e~~~~--~  164 (328)
                      +||.... ......+...++.|+.++.+++++|.+.       ..+++++|++||.++  ||...  ..+.+|+.+.  .
T Consensus        81 ~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         81 LAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV--YGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             CCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh--cCCCCCCCCCcCCCCCCCCC
Confidence            9996422 2233456889999999999999999762       124679999999998  98542  3356776653  4


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~  238 (328)
                      +.| .+|...|.....+....+++++++||+++|||+... ..+++.+  ....+.++   +++++.++++|++|+++++
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~  236 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL  236 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-ccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHH
Confidence            567 778888877777766679999999999999998632 1233322  33445543   7788899999999999999


Q ss_pred             HHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhc--CcceeeecCcccCchHHH-HCCCCc
Q 020254          239 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLG--EGAFVVLEGQRVVPARAK-ELGFPF  314 (328)
Q Consensus       239 ~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~-~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~lG~~p  314 (328)
                      ..++.....+++||++++++++++|+++.+.+.+|... ..+.+.........  ...........++++|++ .|||+|
T Consensus       237 ~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p  316 (355)
T PRK10217        237 YCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLP  316 (355)
T ss_pred             HHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCC
Confidence            99998765567999999999999999999999998532 11211111000000  000001122456778884 599999


Q ss_pred             ccccHHHHHHHhh
Q 020254          315 KYRYVKDALKAIM  327 (328)
Q Consensus       315 ~~~~~~~~l~~~l  327 (328)
                      +++ ++|+|++++
T Consensus       317 ~~~-l~e~l~~~~  328 (355)
T PRK10217        317 QET-FESGMRKTV  328 (355)
T ss_pred             cCc-HHHHHHHHH
Confidence            995 999999986

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.3e-37  Score=274.57  Aligned_cols=290  Identities=19%  Similarity=0.217  Sum_probs=209.7

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+...|+|||||||||||++|++.|+++||+|++++|............  ..+...|+.|.+.+..++.++|+|||+|+
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFC--HEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccccccc--ceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            3446789999999999999999999999999999998654211110000  01334688888888888889999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc----ccccCCC--C--CCCch-HH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----EVFDESS--P--SGNDY-LA  169 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~----~~~~e~~--~--~~~~y-~~  169 (328)
                      ...........+......|+.++.+++++|++  .++++|||+||.++  ||....    .++.|+.  |  +.+.| ..
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~--~~vk~~V~~SS~~v--Yg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARI--NGVKRFFYASSACI--YPEFKQLETNVSLKESDAWPAEPQDAYGLE  170 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHH--hCCCEEEEeCchhh--cCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence            64221112223345567899999999999998  78899999999998  986532    1345543  2  34567 77


Q ss_pred             HHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchh---hhHHHH--HHHc-CCCC---CCCCcccccccHHHHHHHHHH
Q 020254          170 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFA-GGPL---GSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       170 k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~--~~~~-~~~~---~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      |...|.....+...++++++++||+++|||+.....   .+...+  .... +.++   +++++.++++|++|++++++.
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~  250 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR  250 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence            877777776666667999999999999999753211   112122  2222 2333   678889999999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCccccc
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRY  318 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~  318 (328)
                      ++... ..++||+++++++|++|+++.+.+..|.+..+ ..|..      ...     .....+++|++ .|||+|+++ 
T Consensus       251 ~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~------~~~-----~~~~~d~sk~~~~lgw~p~~~-  317 (370)
T PLN02695        251 LTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP------EGV-----RGRNSDNTLIKEKLGWAPTMR-  317 (370)
T ss_pred             HHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC------CCc-----cccccCHHHHHHhcCCCCCCC-
Confidence            88765 36799999999999999999999999865322 11110      000     12346788886 489999995 


Q ss_pred             HHHHHHHhh
Q 020254          319 VKDALKAIM  327 (328)
Q Consensus       319 ~~~~l~~~l  327 (328)
                      ++++|++++
T Consensus       318 l~e~i~~~~  326 (370)
T PLN02695        318 LKDGLRITY  326 (370)
T ss_pred             HHHHHHHHH
Confidence            999999986

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2e-37  Score=292.10  Aligned_cols=304  Identities=18%  Similarity=0.254  Sum_probs=218.9

Q ss_pred             cccccccCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChh-hHhhcCCCcE
Q 020254           15 SDHTQKASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTA   92 (328)
Q Consensus        15 ~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~   92 (328)
                      .+..+...+|+|||||||||||++|+++|+++ ||+|++++|.+.......... ...+...|+.|.+. ++++++++|+
T Consensus       307 ~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~-~~~~~~gDl~d~~~~l~~~l~~~D~  385 (660)
T PRK08125        307 KPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHP-RFHFVEGDISIHSEWIEYHIKKCDV  385 (660)
T ss_pred             cchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCC-ceEEEeccccCcHHHHHHHhcCCCE
Confidence            33345566889999999999999999999985 799999999775433222211 11134568887655 5677889999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---------
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------  163 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---------  163 (328)
                      |||+|+...... ....+...++.|+.++.+++++|++  .+ +++||+||+++  ||.....+++|+.+.         
T Consensus       386 ViHlAa~~~~~~-~~~~~~~~~~~Nv~~t~~ll~a~~~--~~-~~~V~~SS~~v--yg~~~~~~~~E~~~~~~~~p~~~p  459 (660)
T PRK08125        386 VLPLVAIATPIE-YTRNPLRVFELDFEENLKIIRYCVK--YN-KRIIFPSTSEV--YGMCTDKYFDEDTSNLIVGPINKQ  459 (660)
T ss_pred             EEECccccCchh-hccCHHHHHHhhHHHHHHHHHHHHh--cC-CeEEEEcchhh--cCCCCCCCcCccccccccCCCCCC
Confidence            999999653322 2334567889999999999999999  55 79999999998  997655567776532         


Q ss_pred             CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch-------hhhHHHH--HHHcCCCC---CCCCccccccc
Q 020254          164 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIH  230 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~  230 (328)
                      .+.| .+|...|.....+...++++++++||+++|||+....       ..+++.+  ....+.++   +++++.++++|
T Consensus       460 ~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~  539 (660)
T PRK08125        460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTD  539 (660)
T ss_pred             ccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceee
Confidence            2357 8888888888877766799999999999999975321       1223332  33345554   67789999999


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCC-ccCHHHHHHHHHHHhCCCC-CCCCcHHH-HHHH-----hcCcceeeecC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA-LKAV-----LGEGAFVVLEG  299 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~-~~~~~e~~~~i~~~~g~~~-~~~~p~~~-~~~~-----~~~~~~~~~~~  299 (328)
                      ++|++++++.+++++.   .+++||+++++ .+|++|+++.+.+.+|.+. .+.+|... ....     .+.. ......
T Consensus       540 v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  618 (660)
T PRK08125        540 IRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKG-YQDVEH  618 (660)
T ss_pred             HHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccc-cccccc
Confidence            9999999999998743   24599999985 7999999999999998642 22333221 0000     0000 001123


Q ss_pred             cccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          300 QRVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       300 ~~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ...+++|++ .|||+|+++ ++++|++++
T Consensus       619 ~~~d~~ka~~~LGw~P~~~-lee~l~~~i  646 (660)
T PRK08125        619 RKPSIRNARRLLDWEPKID-MQETIDETL  646 (660)
T ss_pred             cCCChHHHHHHhCCCCCCc-HHHHHHHHH
Confidence            346778886 589999995 999999986

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.4e-37  Score=271.44  Aligned_cols=298  Identities=17%  Similarity=0.133  Sum_probs=212.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cccCCC-----CCccccCceeecCChhhHhhcC--CCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GST   91 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d   91 (328)
                      |+||||||+||||++|+++|+++|++|++++|++...     ..+...     .....+..+|+.|.+.+.++++  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999986421     111000     0011244679999999999987  579


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC---CcEEEEecccceeecCCCcccccCCCCC--CCc
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPS--GND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~  166 (328)
                      +|||+|+.... ......+....++|+.++.+++++|.+  .++   .++||+||+++  ||.....+.+|+.+.  .+.
T Consensus        81 ~ViH~Aa~~~~-~~~~~~~~~~~~~n~~gt~~ll~a~~~--~~~~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~  155 (343)
T TIGR01472        81 EIYNLAAQSHV-KVSFEIPEYTADVDGIGTLRLLEAVRT--LGLIKSVKFYQASTSEL--YGKVQEIPQNETTPFYPRSP  155 (343)
T ss_pred             EEEECCccccc-chhhhChHHHHHHHHHHHHHHHHHHHH--hCCCcCeeEEEeccHHh--hCCCCCCCCCCCCCCCCCCh
Confidence            99999997432 222334567778899999999999998  444   38999999999  997655567777663  456


Q ss_pred             h-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHH-HH-HHHcCCC----CCCCCcccccccHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~D~a~~  237 (328)
                      | .+|...|.....+...+++++++.|+.++|||+...  ....+. .+ ....+++    ++++++.++++|++|+|++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a  235 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA  235 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence            7 788888888877766678999999999999986321  122222 22 2333432    2678899999999999999


Q ss_pred             HHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC--------CCcHHHHHHH--hcCc--ceeeecCcccCch
Q 020254          238 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL--------PVPEFALKAV--LGEG--AFVVLEGQRVVPA  305 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~--------~~p~~~~~~~--~~~~--~~~~~~~~~~~~~  305 (328)
                      ++.+++.+. .++|||++++++|++|+++.+.+.+|++..+        ..|.......  .+..  ...-......+.+
T Consensus       236 ~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  314 (343)
T TIGR01472       236 MWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDAT  314 (343)
T ss_pred             HHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHH
Confidence            999998754 5799999999999999999999999965211        0011000000  0000  0111122245778


Q ss_pred             HHH-HCCCCcccccHHHHHHHhhC
Q 020254          306 RAK-ELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       306 ~~~-~lG~~p~~~~~~~~l~~~l~  328 (328)
                      |++ +|||+|+++ ++|+|+++++
T Consensus       315 k~~~~lgw~p~~~-l~egi~~~~~  337 (343)
T TIGR01472       315 KAKEKLGWKPEVS-FEKLVKEMVE  337 (343)
T ss_pred             HHHHhhCCCCCCC-HHHHHHHHHH
Confidence            885 589999995 9999999873

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.2e-36  Score=265.35  Aligned_cols=292  Identities=16%  Similarity=0.154  Sum_probs=209.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc---CC-CC--CccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP-GK--KTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~-~~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ..|+||||||+||||++++++|+++|++|++++|++......   .. ..  ....+..+|+.|.+.+.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            357999999999999999999999999999998887543211   00 00  0112345799999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC-----CcccccCCCCCC------
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-----ETEVFDESSPSG------  164 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~-----~~~~~~e~~~~~------  164 (328)
                      +|+... .......+...++.|+.++.++++++.+. .+.+++|++||.++  |+..     +..+++|+.+..      
T Consensus        84 ~A~~~~-~~~~~~~~~~~~~~n~~g~~~ll~a~~~~-~~~~~iv~~SS~~~--~~~~~~~~~~~~~~~E~~~~~p~~~~~  159 (325)
T PLN02989         84 TASPVA-ITVKTDPQVELINPAVNGTINVLRTCTKV-SSVKRVILTSSMAA--VLAPETKLGPNDVVDETFFTNPSFAEE  159 (325)
T ss_pred             eCCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecchhh--eecCCccCCCCCccCcCCCCchhHhcc
Confidence            999642 22334456788899999999999999873 24679999999876  5432     233567776643      


Q ss_pred             --Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhH-HHH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 --NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 --~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                        +.| .+|...|.....+...++++++++||+++|||+......+. ..+ ....++++. ..+.++++|++|+|++++
T Consensus       160 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~~  238 (325)
T PLN02989        160 RKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAHV  238 (325)
T ss_pred             cccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHHH
Confidence              347 78888888877766667999999999999999764322222 222 333444332 234578999999999999


Q ss_pred             HHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccH
Q 020254          240 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  319 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~  319 (328)
                      .+++.+...|+||++ +..+|++|+++.+.+.++... +..+       .++...........+++|+++|||.|+++ +
T Consensus       239 ~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~k~~~lg~~p~~~-l  308 (325)
T PLN02989        239 KALETPSANGRYIID-GPVVTIKDIENVLREFFPDLC-IADR-------NEDITELNSVTFNVCLDKVKSLGIIEFTP-T  308 (325)
T ss_pred             HHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCC-CCCC-------CCCcccccccCcCCCHHHHHHcCCCCCCC-H
Confidence            999876656799995 557999999999999997421 1110       01111111123456678888899999996 9


Q ss_pred             HHHHHHhhC
Q 020254          320 KDALKAIMS  328 (328)
Q Consensus       320 ~~~l~~~l~  328 (328)
                      +++|+++++
T Consensus       309 ~~gi~~~~~  317 (325)
T PLN02989        309 ETSLRDTVL  317 (325)
T ss_pred             HHHHHHHHH
Confidence            999999863

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=4.9e-37  Score=275.64  Aligned_cols=293  Identities=18%  Similarity=0.181  Sum_probs=205.3

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-------ccCC--------------CCCccccCceeec
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIFP--------------GKKTRFFPGVMIA   78 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~--------------~~~~~~~~~~d~~   78 (328)
                      ..++|+||||||+||||++|+++|+++|++|++++|......       ....              ......+..+|+.
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            346789999999999999999999999999999875321110       0000              0001124467999


Q ss_pred             CChhhHhhcC--CCcEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-cEEEEecccceeecCCC
Q 020254           79 EEPQWRDCIQ--GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSE  153 (328)
Q Consensus        79 ~~~~~~~~~~--~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~Ss~~v~~yg~~~  153 (328)
                      |.+.+.++++  ++|+|||+|+.....  ..........++.|+.++.+++++|++  .+++ ++|++||.++  ||...
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~--~gv~~~~V~~SS~~v--YG~~~  199 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKE--FAPDCHLVKLGTMGE--YGTPN  199 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHH--hCCCccEEEEeccee--cCCCC
Confidence            9999999887  589999999764221  111223456678999999999999998  5665 8999999998  98642


Q ss_pred             ccccc-----------CCC---C--CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch------------
Q 020254          154 TEVFD-----------ESS---P--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------------  204 (328)
Q Consensus       154 ~~~~~-----------e~~---~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------------  204 (328)
                       .+.+           |++   +  +.+.| .+|...|.....+...++++++++||+++|||+....            
T Consensus       200 -~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~  278 (442)
T PLN02572        200 -IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDY  278 (442)
T ss_pred             -CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCc
Confidence             1121           121   2  23467 8888888888777777899999999999999975321            


Q ss_pred             ----hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCC-C--ceEEecCCCccCHHHHHHHHHHH-
Q 020254          205 ----AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGNV-  271 (328)
Q Consensus       205 ----~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~--g~~~i~~~~~~~~~e~~~~i~~~-  271 (328)
                          ...+..+  +...++++   +++++.++++||+|+|++++.+++.... +  .+||+++ +.+++.|+++.+.+. 
T Consensus       279 ~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~  357 (442)
T PLN02572        279 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAG  357 (442)
T ss_pred             ccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHH
Confidence                1222222  33446553   6788999999999999999999986432 2  3899977 569999999999999 


Q ss_pred             --hCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCccc---ccHHHHHHHhh
Q 020254          272 --LGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY---RYVKDALKAIM  327 (328)
Q Consensus       272 --~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~---~~~~~~l~~~l  327 (328)
                        +|.+..+ ..|...        ..........+.+|+++|||+|++   + ++++|.+++
T Consensus       358 ~~~g~~~~~~~~p~~~--------~~~~~~~~~~d~~k~~~LGw~p~~~~~~-l~~~l~~~~  410 (442)
T PLN02572        358 EKLGLDVEVISVPNPR--------VEAEEHYYNAKHTKLCELGLEPHLLSDS-LLDSLLNFA  410 (442)
T ss_pred             HhhCCCCCeeeCCCCc--------ccccccccCccHHHHHHcCCCCCCcHHH-HHHHHHHHH
Confidence              8865222 122110        001112344567788889999997   4 777777664

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.2e-36  Score=263.32  Aligned_cols=280  Identities=15%  Similarity=0.177  Sum_probs=197.4

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC---hh-hHhhc-----CCCcEEEEC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQ-WRDCI-----QGSTAVVNL   96 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~~~~~-----~~~d~vi~~   96 (328)
                      |||||||||||++|+++|++.|++++++.|+.........      +..+|+.|.   ++ +++++     .++|+|||+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~   75 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN------LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHE   75 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHh------hhhhhhhhhhhHHHHHHHHhcccccCCccEEEEC
Confidence            8999999999999999999999977777665443211101      223455443   33 23333     269999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC--CCCch-HHHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCR  173 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--~~~~y-~~k~~~  173 (328)
                      |+......   ......++.|+.++.+++++|++  .++ ++||+||.++  ||.....+.+|..+  +.+.| .+|...
T Consensus        76 A~~~~~~~---~~~~~~~~~n~~~t~~ll~~~~~--~~~-~~i~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (308)
T PRK11150         76 GACSSTTE---WDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTDDFIEEREYEKPLNVYGYSKFLF  147 (308)
T ss_pred             ceecCCcC---CChHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEcchHH--hCcCCCCCCccCCCCCCCCHHHHHHHHH
Confidence            98643222   13346789999999999999999  566 6999999999  99765445666554  33567 778777


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH--HHHcCCCC----CCCCcccccccHHHHHHHHHHHhhC
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      |.....+....+++++++||+++||++...   ...+...+  ....+.+.    ++++..++++|++|+|++++.+++.
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~  227 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN  227 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence            777766655568999999999999997532   12222222  23344432    4456689999999999999999886


Q ss_pred             CCCCceEEecCCCccCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHH
Q 020254          245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA  322 (328)
Q Consensus       245 ~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~  322 (328)
                      .. +++||+++++++++.|+++.+.+.+|...  ..+.|....        .........+++|++++||+|++.+++++
T Consensus       228 ~~-~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~k~~~~g~~p~~~~~~~g  298 (308)
T PRK11150        228 GV-SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLK--------GRYQAFTQADLTKLRAAGYDKPFKTVAEG  298 (308)
T ss_pred             CC-CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccc--------cccceecccCHHHHHhcCCCCCCCCHHHH
Confidence            53 57999999999999999999999998531  112222110        00112345788889889999985459999


Q ss_pred             HHHhhC
Q 020254          323 LKAIMS  328 (328)
Q Consensus       323 l~~~l~  328 (328)
                      |+++++
T Consensus       299 l~~~~~  304 (308)
T PRK11150        299 VAEYMA  304 (308)
T ss_pred             HHHHHH
Confidence            999863

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.2e-36  Score=267.41  Aligned_cols=292  Identities=19%  Similarity=0.175  Sum_probs=211.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcC--CCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a   97 (328)
                      +|+||||||+||||+++++.|+++|++|++++|+........   .......+..+|+.|.+++.++++  ++|+|||+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            479999999999999999999999999999999876433211   100011134579999999998887  479999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCc-ccccCCCCC--CCch-HHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSET-EVFDESSPS--GNDY-LAEVC  172 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~-~~~~e~~~~--~~~y-~~k~~  172 (328)
                      +.... .....++...+++|+.++.++++++.+  .+ ++++|++||..+  ||.... .+.+|+.+.  .+.| .+|..
T Consensus        84 ~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~~e~~~~~p~~~Y~~sK~~  158 (349)
T TIGR02622        84 AQPLV-RKSYADPLETFETNVMGTVNLLEAIRA--IGSVKAVVNVTSDKC--YRNDEWVWGYRETDPLGGHDPYSSSKAC  158 (349)
T ss_pred             ccccc-ccchhCHHHHHHHhHHHHHHHHHHHHh--cCCCCEEEEEechhh--hCCCCCCCCCccCCCCCCCCcchhHHHH
Confidence            96422 334456678889999999999999987  44 679999999998  986432 345665543  4567 77887


Q ss_pred             HHHHHHHhccc-------CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCC--CCCCCcccccccHHHHHHHHHHH
Q 020254          173 REWEGTALKVN-------KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP--LGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       173 ~~~~~~~~~~~-------~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .|.....+...       .+++++++||+++|||++.....+++.+  ....+.+  ++++.+.++++|++|+|++++.+
T Consensus       159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~  238 (349)
T TIGR02622       159 AELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLL  238 (349)
T ss_pred             HHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHH
Confidence            77777655433       2899999999999999753323444443  2334444  36788999999999999999988


Q ss_pred             hhCC-----CCCceEEecCC--CccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCC
Q 020254          242 LSNP-----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF  312 (328)
Q Consensus       242 ~~~~-----~~~g~~~i~~~--~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~  312 (328)
                      ++..     ..+++|||+++  ++++..|+++.+.+.++.. ..+..+..       ............+++|+++ |||
T Consensus       239 ~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~lgw  311 (349)
T TIGR02622       239 AEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD-------LNHPHEARLLKLDSSKARTLLGW  311 (349)
T ss_pred             HHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC-------CCCCcccceeecCHHHHHHHhCC
Confidence            7642     23579999974  6899999999999877632 11211100       0011112345678888865 899


Q ss_pred             CcccccHHHHHHHhh
Q 020254          313 PFKYRYVKDALKAIM  327 (328)
Q Consensus       313 ~p~~~~~~~~l~~~l  327 (328)
                      +|+++ ++++|++++
T Consensus       312 ~p~~~-l~~gi~~~i  325 (349)
T TIGR02622       312 HPRWG-LEEAVSRTV  325 (349)
T ss_pred             CCCCC-HHHHHHHHH
Confidence            99995 999999875

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=4.4e-37  Score=266.04  Aligned_cols=271  Identities=18%  Similarity=0.247  Sum_probs=204.1

Q ss_pred             EEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCCCCC
Q 020254           27 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPIGTR  104 (328)
Q Consensus        27 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~~~~  104 (328)
                      ||||||||||++|++.|++.|++|+++.+.                ..+|+.|.++++++++  ++|+|||||+......
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~   64 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIH   64 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccc
Confidence            699999999999999999999988766432                1369999999988876  5899999998743222


Q ss_pred             CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC----CCC--C-ch-HHHHHHHHH
Q 020254          105 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSG--N-DY-LAEVCREWE  176 (328)
Q Consensus       105 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~----~~~--~-~y-~~k~~~~~~  176 (328)
                      .....+...++.|+.++.+++++|++  .+++++|++||+.+  ||.....+.+|++    +..  + .| .+|...|..
T Consensus        65 ~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~  140 (306)
T PLN02725         65 ANMTYPADFIRENLQIQTNVIDAAYR--HGVKKLLFLGSSCI--YPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKM  140 (306)
T ss_pred             hhhhCcHHHHHHHhHHHHHHHHHHHH--cCCCeEEEeCceee--cCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHH
Confidence            33345667889999999999999999  68899999999998  9976666777765    322  2 37 778777776


Q ss_pred             HHHhcccCCCeEEEEEeceEEcCCCcc-------hhhhHHHH--HHHcCCCC----CCCCcccccccHHHHHHHHHHHhh
Q 020254          177 GTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       177 ~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      ...+....+++++++||+.+||++...       ...++..+  ....+.++    +++.+.++++|++|++++++.+++
T Consensus       141 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~  220 (306)
T PLN02725        141 CQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMR  220 (306)
T ss_pred             HHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHh
Confidence            666666678999999999999997431       11222222  11234432    467788999999999999999998


Q ss_pred             CCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHH
Q 020254          244 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  323 (328)
Q Consensus       244 ~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l  323 (328)
                      .....+.||+++++++++.|+++.+.+.++.+..+....       ..  ........++++|++++||+|+++ ++++|
T Consensus       221 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-------~~--~~~~~~~~~d~~k~~~lg~~p~~~-~~~~l  290 (306)
T PLN02725        221 RYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDT-------SK--PDGTPRKLMDSSKLRSLGWDPKFS-LKDGL  290 (306)
T ss_pred             ccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecC-------CC--CCcccccccCHHHHHHhCCCCCCC-HHHHH
Confidence            755557899999999999999999999998653221100       00  000123456788888899999995 99999


Q ss_pred             HHhh
Q 020254          324 KAIM  327 (328)
Q Consensus       324 ~~~l  327 (328)
                      ++++
T Consensus       291 ~~~~  294 (306)
T PLN02725        291 QETY  294 (306)
T ss_pred             HHHH
Confidence            9876

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-36  Score=264.26  Aligned_cols=290  Identities=20%  Similarity=0.222  Sum_probs=205.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc---CCC---CCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ..|+|||||||||||++|+++|+++||+|++++|+.......   ...   .....+...|+.|++.+.++++++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            347899999999999999999999999999999986532111   000   00112445799999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCC-CCCcEEEEecccceeecCC---CcccccCCCCCC-------
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTS---ETEVFDESSPSG-------  164 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~Ss~~v~~yg~~---~~~~~~e~~~~~-------  164 (328)
                      +|+.....  ........++.|+.++.++++++.+  . +++++||+||.++..|+..   ...+.+|+.+..       
T Consensus        83 ~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~  158 (322)
T PLN02662         83 TASPFYHD--VTDPQAELIDPAVKGTLNVLRSCAK--VPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES  158 (322)
T ss_pred             eCCcccCC--CCChHHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence            99864211  1122247889999999999999988  4 7889999999864226532   223466665432       


Q ss_pred             -Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhH-HHH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 -NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 -~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                       +.| .+|...|.....+....+++++++||+++|||......... ..+ ....+.+. .+.+.+++||++|+|++++.
T Consensus       159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-FPNASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-CCCCCcCeEEHHHHHHHHHH
Confidence             246 77777777776666667999999999999999753221111 112 33334332 24567899999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHH
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  320 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~  320 (328)
                      +++.+...|.||++ +.+++++|+++.+.+.++..   ..|....    +  .........++++|+++|||+|.  +++
T Consensus       238 ~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~---~~~~~~~----~--~~~~~~~~~~d~~k~~~lg~~~~--~~~  305 (322)
T PLN02662        238 AFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL---QLPEKCA----D--DKPYVPTYQVSKEKAKSLGIEFI--PLE  305 (322)
T ss_pred             HhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC---CCCCCCC----C--ccccccccccChHHHHHhCCccc--cHH
Confidence            99986556789997 46799999999999987642   1221110    0  00112345688899988999974  599


Q ss_pred             HHHHHhhC
Q 020254          321 DALKAIMS  328 (328)
Q Consensus       321 ~~l~~~l~  328 (328)
                      ++|+++++
T Consensus       306 ~~l~~~~~  313 (322)
T PLN02662        306 VSLKDTVE  313 (322)
T ss_pred             HHHHHHHH
Confidence            99999863

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.7e-36  Score=262.64  Aligned_cols=291  Identities=20%  Similarity=0.261  Sum_probs=206.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc---CC---CCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ..++|||||||||||++++++|+++||+|+++.|+.......   ..   ......+...|+.|++.+.++++++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            357999999999999999999999999999999987643211   10   000112445789999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC---CcccccCCCCC--------C
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS---ETEVFDESSPS--------G  164 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~---~~~~~~e~~~~--------~  164 (328)
                      +|+.....  ..+.....++.|+.++.++++++++. .+++++|++||.++..|+..   ...+++|+.+.        .
T Consensus        84 ~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  160 (322)
T PLN02986         84 TASPVFFT--VKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK  160 (322)
T ss_pred             eCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence            99864221  11223457889999999999999872 26789999999876334532   23346666542        3


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhh-HHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      +.| .+|...|.....+...++++++++||+++|||........ ...+ ....+.++. +.+.+++||++|+|++++.+
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~v~v~Dva~a~~~a  239 (322)
T PLN02986        161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF-NNRFYRFVDVRDVALAHIKA  239 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCC-CCcCcceeEHHHHHHHHHHH
Confidence            457 8888888877777666799999999999999974321111 1111 333444432 35568999999999999999


Q ss_pred             hhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHH
Q 020254          242 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD  321 (328)
Q Consensus       242 ~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~  321 (328)
                      ++.+...+.||++ ++.+++.|+++.+.+.++..   .+|... .  .++.   ......++++|++.|||+|+  +++|
T Consensus       240 l~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~---~~~~~~-~--~~~~---~~~~~~~d~~~~~~lg~~~~--~l~e  307 (322)
T PLN02986        240 LETPSANGRYIID-GPIMSVNDIIDILRELFPDL---CIADTN-E--ESEM---NEMICKVCVEKVKNLGVEFT--PMKS  307 (322)
T ss_pred             hcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCC---CCCCCC-c--cccc---cccCCccCHHHHHHcCCccc--CHHH
Confidence            9987666799995 56799999999999998731   111110 0  0110   01112467788888999997  5999


Q ss_pred             HHHHhhC
Q 020254          322 ALKAIMS  328 (328)
Q Consensus       322 ~l~~~l~  328 (328)
                      +|+++++
T Consensus       308 ~~~~~~~  314 (322)
T PLN02986        308 SLRDTIL  314 (322)
T ss_pred             HHHHHHH
Confidence            9999863

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=3.1e-36  Score=265.23  Aligned_cols=290  Identities=21%  Similarity=0.249  Sum_probs=203.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---C-C--CccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---G-K--KTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~-~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ..++||||||+||||++|+++|+++|++|++++|+.........   . .  ....+...|+.|.+.++++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            34689999999999999999999999999999998654322110   0 0  0012345789999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCC-Cccc-ccCCCC----------
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS-ETEV-FDESSP----------  162 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~-~~~~-~~e~~~----------  162 (328)
                      +|+.....  ........+++|+.++.+++++|.+  .+ +++|||+||.++  |+.. ...+ ++|+.+          
T Consensus        84 ~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~r~v~~SS~~~--~~~~~~~~~~~~E~~~~~~~~~~~~~  157 (351)
T PLN02650         84 VATPMDFE--SKDPENEVIKPTVNGMLSIMKACAK--AKTVRRIVFTSSAGT--VNVEEHQKPVYDEDCWSDLDFCRRKK  157 (351)
T ss_pred             eCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHh--cCCceEEEEecchhh--cccCCCCCCccCcccCCchhhhhccc
Confidence            99864211  1222357789999999999999998  44 689999999876  5532 2223 455431          


Q ss_pred             -CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch--hhhHHHHHHHcCCC-CCCCCcccccccHHHHHHH
Q 020254          163 -SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 -~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~  237 (328)
                       +...| .+|...|.....+...++++++++||+++|||+....  ..+...+....+.. .......++++|++|+|++
T Consensus       158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a  237 (351)
T PLN02650        158 MTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNA  237 (351)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHH
Confidence             12357 8888888888777777899999999999999975321  12222222222322 1112234799999999999


Q ss_pred             HHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccc
Q 020254          238 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYR  317 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~  317 (328)
                      ++.+++.+...+.| ++++..+++.|+++.+.+.++..   ..|... .   +.  .........+++|+++|||+|+++
T Consensus       238 ~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~---~~~~~~-~---~~--~~~~~~~~~d~~k~~~lG~~p~~~  307 (351)
T PLN02650        238 HIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEY---NIPARF-P---GI--DEDLKSVEFSSKKLTDLGFTFKYS  307 (351)
T ss_pred             HHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCccc---CCCCCC-C---Cc--CcccccccCChHHHHHhCCCCCCC
Confidence            99999876656788 56667799999999999988632   111110 0   00  011123455777888899999995


Q ss_pred             cHHHHHHHhhC
Q 020254          318 YVKDALKAIMS  328 (328)
Q Consensus       318 ~~~~~l~~~l~  328 (328)
                       ++++|+++++
T Consensus       308 -l~egl~~~i~  317 (351)
T PLN02650        308 -LEDMFDGAIE  317 (351)
T ss_pred             -HHHHHHHHHH
Confidence             9999999863

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=5.2e-36  Score=262.54  Aligned_cols=290  Identities=17%  Similarity=0.221  Sum_probs=203.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-----CCCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      .+|+||||||+||||++|++.|+++|++|++++|+.......     ........+..+|+.|.+.+.++++++|+|||+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            467899999999999999999999999999999886542210     111001124467999999999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC----cccccCC-----------C
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDES-----------S  161 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~----~~~~~e~-----------~  161 (328)
                      |+....  .........++.|+.++.++++++.+. .+++++||+||.++  ||...    ..+.+|.           .
T Consensus        88 A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~-~~~~~~v~~SS~~~--~g~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T PLN00198         88 ATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKA-KSVKRVILTSSAAA--VSINKLSGTGLVMNEKNWTDVEFLTSEK  162 (338)
T ss_pred             CCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeeccee--eeccCCCCCCceeccccCCchhhhhhcC
Confidence            985321  112233457789999999999999873 25789999999988  87432    2233433           2


Q ss_pred             CCCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH-HHHcCCCC---C-CC----Cccccccc
Q 020254          162 PSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL---G-SG----QQWFSWIH  230 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~---~-~~----~~~~~~i~  230 (328)
                      ++.+.| .+|...|.....+...++++++++||++||||+... ...++..+ ....+.++   + .+    +..++++|
T Consensus       163 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~  242 (338)
T PLN00198        163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITH  242 (338)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeE
Confidence            344568 888888888877777679999999999999997532 12222211 23334332   1 11    22479999


Q ss_pred             HHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHC
Q 020254          231 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL  310 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  310 (328)
                      ++|+|++++.+++.+...+.| ++++..+++.|+++.+.+.++...   +|...     +...  ......++++|++++
T Consensus       243 V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~---~~~~~-----~~~~--~~~~~~~~~~k~~~~  311 (338)
T PLN00198        243 VEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQ---VPTDF-----GDFP--SKAKLIISSEKLISE  311 (338)
T ss_pred             HHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCC---CCccc-----cccC--CCCccccChHHHHhC
Confidence            999999999999876555678 455667899999999998876421   11110     0000  012345677888889


Q ss_pred             CCCcccccHHHHHHHhhC
Q 020254          311 GFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       311 G~~p~~~~~~~~l~~~l~  328 (328)
                      ||+|+++ ++++|+++++
T Consensus       312 G~~p~~~-l~~gi~~~~~  328 (338)
T PLN00198        312 GFSFEYG-IEEIYDQTVE  328 (338)
T ss_pred             CceecCc-HHHHHHHHHH
Confidence            9999996 9999999863

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=2.5e-36  Score=259.35  Aligned_cols=272  Identities=14%  Similarity=0.110  Sum_probs=196.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+||||||+||||++|++.|+++| +|++++|...             ....|+.|.+.+.++++  ++|+|||||+...
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~   66 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTA   66 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence            589999999999999999999999 7999988642             22369999999998887  6999999999753


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC--ch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~  178 (328)
                       ...+..+++....+|+.++.+++++|++  .++ ++||+||+.+  ||.....+++|++++.+  .| .+|...|....
T Consensus        67 -~~~~~~~~~~~~~~N~~~~~~l~~aa~~--~g~-~~v~~Ss~~V--y~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~  140 (299)
T PRK09987         67 -VDKAESEPEFAQLLNATSVEAIAKAANE--VGA-WVVHYSTDYV--FPGTGDIPWQETDATAPLNVYGETKLAGEKALQ  140 (299)
T ss_pred             -cchhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEccceE--ECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence             3334456677888999999999999999  554 7999999999  98776678888877544  46 56666555544


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCC---CC--CCcccccccHHHHHHHHHHHhhCCCCCceEE
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPL---GS--GQQWFSWIHLDDIVNLIYEALSNPSYRGVIN  252 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~---~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~  252 (328)
                      .+    ..+++++|++++|||+...+ ..++.  ....++++   ++  +...+...+++|++.++..++..+...|+||
T Consensus       141 ~~----~~~~~ilR~~~vyGp~~~~~~~~~~~--~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyn  214 (299)
T PRK09987        141 EH----CAKHLIFRTSWVYAGKGNNFAKTMLR--LAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYH  214 (299)
T ss_pred             Hh----CCCEEEEecceecCCCCCCHHHHHHH--HHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEE
Confidence            33    34679999999999975322 22222  22234443   33  3444455667778888888776544457999


Q ss_pred             ecCCCccCHHHHHHHHHHHhCC---CC----CCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHH
Q 020254          253 GTAPNPVRLAEMCDHLGNVLGR---PS----WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALK  324 (328)
Q Consensus       253 i~~~~~~~~~e~~~~i~~~~g~---~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~  324 (328)
                      +++++.+|+.|+++.+.+.++.   +.    ..+.|......     ......+..++.+|+++ +||+|.  +|+++|+
T Consensus       215 i~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~-----~~~rp~~~~ld~~k~~~~lg~~~~--~~~~~l~  287 (299)
T PRK09987        215 LVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPT-----PARRPHNSRLNTEKFQQNFALVLP--DWQVGVK  287 (299)
T ss_pred             eeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCC-----CCCCCCcccCCHHHHHHHhCCCCc--cHHHHHH
Confidence            9999999999999999886542   21    11222221110     11123455777888865 899986  6999999


Q ss_pred             HhhC
Q 020254          325 AIMS  328 (328)
Q Consensus       325 ~~l~  328 (328)
                      ++++
T Consensus       288 ~~~~  291 (299)
T PRK09987        288 RMLT  291 (299)
T ss_pred             HHHH
Confidence            8863

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.5e-36  Score=264.72  Aligned_cols=292  Identities=15%  Similarity=0.132  Sum_probs=212.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCC-------CCCccccCceeecCChhhHhhcC--CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFP-------GKKTRFFPGVMIAEEPQWRDCIQ--GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~--~~   90 (328)
                      ++|+||||||+||||++|++.|+++|++|++++|++...  .....       ......+..+|+.|.+.+.++++  ++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999876421  11100       00011244579999999988886  57


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-----cEEEEecccceeecCCCcccccCCCCC--
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLVSATALGYYGTSETEVFDESSPS--  163 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~v~~Ss~~v~~yg~~~~~~~~e~~~~--  163 (328)
                      |+|||+|+.... ......+...+++|+.++.++++++.+  .+++     ++|++||+++  ||.... +.+|+.+.  
T Consensus        85 d~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~~~~~~v~~Ss~~v--yg~~~~-~~~E~~~~~p  158 (340)
T PLN02653         85 DEVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRL--HGQETGRQIKYYQAGSSEM--YGSTPP-PQSETTPFHP  158 (340)
T ss_pred             CEEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHH--hccccccceeEEEeccHHH--hCCCCC-CCCCCCCCCC
Confidence            999999997422 222344567778999999999999998  4543     8999999998  997654 67777764  


Q ss_pred             CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHHH-H-HHHcCCC--C--CCCCcccccccHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP--L--GSGQQWFSWIHLDDI  234 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~-~~~~~~~--~--~~~~~~~~~i~v~D~  234 (328)
                      .+.| .+|...|.....+...+++.++..|+.++|||+...  ...++.. + ....+.+  +  +++++.++++|++|+
T Consensus       159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~  238 (340)
T PLN02653        159 RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDY  238 (340)
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHH
Confidence            3457 788888888777766678888999999999986432  1222222 1 2223432  2  678899999999999


Q ss_pred             HHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhcCcceeeecCcccCchHHH-HCC
Q 020254          235 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELG  311 (328)
Q Consensus       235 a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG  311 (328)
                      |++++.+++... .+.||+++++++|++|+++.+.+..|.+.  .+.+...       ............+++|++ .||
T Consensus       239 a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~lg  310 (340)
T PLN02653        239 VEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPR-------YFRPAEVDNLKGDASKAREVLG  310 (340)
T ss_pred             HHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcc-------cCCccccccccCCHHHHHHHhC
Confidence            999999998753 57999999999999999999999998641  1111100       000111123456788885 589


Q ss_pred             CCcccccHHHHHHHhhC
Q 020254          312 FPFKYRYVKDALKAIMS  328 (328)
Q Consensus       312 ~~p~~~~~~~~l~~~l~  328 (328)
                      |+|+++ ++|+|+++++
T Consensus       311 w~p~~~-l~~gi~~~~~  326 (340)
T PLN02653        311 WKPKVG-FEQLVKMMVD  326 (340)
T ss_pred             CCCCCC-HHHHHHHHHH
Confidence            999995 9999999863

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=5.2e-36  Score=283.98  Aligned_cols=292  Identities=20%  Similarity=0.228  Sum_probs=211.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCc--ccccCC--CCCccccCceeecCChhhHhhc--CCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCI--QGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~~~~~~~~~~--~~~d~v   93 (328)
                      ++|+|||||||||||++|++.|+++  +++|++++|....  ...+..  ......+...|+.|.+.+..++  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            3579999999999999999999987  6899999885311  111110  0001124457888888887665  589999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCccc---ccCCCC--CCCch
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEV---FDESSP--SGNDY  167 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~---~~e~~~--~~~~y  167 (328)
                      ||+|+.... ......+.+..+.|+.++.+++++|++  .+ ++++||+||..+  ||.....+   .+|+.+  +.+.|
T Consensus        85 iHlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~vkr~I~~SS~~v--yg~~~~~~~~~~~E~~~~~p~~~Y  159 (668)
T PLN02260         85 MHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKV--TGQIRRFIHVSTDEV--YGETDEDADVGNHEASQLLPTNPY  159 (668)
T ss_pred             EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEEcchHH--hCCCccccccCccccCCCCCCCCc
Confidence            999997532 222234567889999999999999998  45 789999999999  99654332   245444  34567


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|...|.....+....+++++++||++|||++... ..+++.+  ....+.++   +++.+.++++|++|+|+++..+
T Consensus       160 ~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~  238 (668)
T PLN02260        160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV  238 (668)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence             778888888777666679999999999999998632 1233332  33345543   6778899999999999999999


Q ss_pred             hhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHH
Q 020254          242 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD  321 (328)
Q Consensus       242 ~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~  321 (328)
                      +.....+++||+++++.+++.|+++.+.+.+|.+....+..       ............++++|+++|||+|+++ ++|
T Consensus       239 l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~-------~~~~p~~~~~~~~d~~k~~~lGw~p~~~-~~e  310 (668)
T PLN02260        239 LHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKF-------VENRPFNDQRYFLDDQKLKKLGWQERTS-WEE  310 (668)
T ss_pred             HhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeee-------cCCCCCCcceeecCHHHHHHcCCCCCCC-HHH
Confidence            98765667999999999999999999999999753111100       0000111122346788888999999985 999


Q ss_pred             HHHHhh
Q 020254          322 ALKAIM  327 (328)
Q Consensus       322 ~l~~~l  327 (328)
                      +|++++
T Consensus       311 gl~~~i  316 (668)
T PLN02260        311 GLKKTM  316 (668)
T ss_pred             HHHHHH
Confidence            999886

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=4.9e-36  Score=264.31  Aligned_cols=297  Identities=16%  Similarity=0.188  Sum_probs=208.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCC--cccccCCC--CCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      |||||||||||||++|+++|+++|++ |+++++...  ........  .....+..+|+.|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            58999999999999999999999975 655555331  11111100  0001134679999999999886  58999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC-------CCCCCcEEEEecccceeecCCC---------c-ccccC
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLVSATALGYYGTSE---------T-EVFDE  159 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~~~v~~Ss~~v~~yg~~~---------~-~~~~e  159 (328)
                      |+.... ......++.+.++|+.++.+++++|.+.       ..+++++|++||.++  ||...         . .+++|
T Consensus        81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV--YGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh--cCCCCccccccccccCCCccc
Confidence            997432 2222345788999999999999999862       014568999999998  88531         1 13566


Q ss_pred             CCCC--CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccH
Q 020254          160 SSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL  231 (328)
Q Consensus       160 ~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v  231 (328)
                      +.+.  .+.| .+|...|.....+...++++++++|++.+|||+... ..+++.+  ....+.++   +++++.++++|+
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  236 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-cchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence            6553  4567 778888877777666679999999999999998532 1233322  33334442   678889999999


Q ss_pred             HHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhcCcceeeecCcccCchHHHH-
Q 020254          232 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFA-LKAVLGEGAFVVLEGQRVVPARAKE-  309 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-  309 (328)
                      +|+|+++..+++.+..+++||++++++++++|+++.+.+.+|...+...|... .....+.  ........++++|+++ 
T Consensus       237 ~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~~  314 (352)
T PRK10084        237 EDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADR--PGHDRRYAIDASKISRE  314 (352)
T ss_pred             HHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccC--CCCCceeeeCHHHHHHH
Confidence            99999999998875556799999999999999999999999864222222110 1100000  0011234577888965 


Q ss_pred             CCCCcccccHHHHHHHhh
Q 020254          310 LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       310 lG~~p~~~~~~~~l~~~l  327 (328)
                      +||+|+++ ++++|++++
T Consensus       315 lg~~p~~~-l~~~l~~~~  331 (352)
T PRK10084        315 LGWKPQET-FESGIRKTV  331 (352)
T ss_pred             cCCCCcCC-HHHHHHHHH
Confidence            99999995 999999876

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-35  Score=256.58  Aligned_cols=287  Identities=23%  Similarity=0.319  Sum_probs=217.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCC-cEEEECCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS-TAVVNLAGTPIG  102 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-d~vi~~a~~~~~  102 (328)
                      |+|||||||||||++|+++|+++||+|++++|...+........   .+...|+.+.+.+.+.+... |+|||+|+....
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~   77 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV---EFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSV   77 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccccccc---ceeeecccchHHHHHHHhcCCCEEEEccccCch
Confidence            45999999999999999999999999999999887655443111   15567888888888888877 999999997533


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC-CcccccCC-CCCCCc--h-HHHHHHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDES-SPSGND--Y-LAEVCREWEG  177 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~-~~~~~~e~-~~~~~~--y-~~k~~~~~~~  177 (328)
                      ......++...+..|+.++.+++++|++  .+++++||.||.++  |+.. ...+.+|+ .+..+.  | .+|...|...
T Consensus        78 ~~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~--~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~  153 (314)
T COG0451          78 PDSNASDPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSV--VYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL  153 (314)
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCce--ECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Confidence            2221113567899999999999999999  89999999777666  5543 33367777 454443  7 7788888777


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcch-h-hhHHH-H-HHHcCCC-C---CCCCcccccccHHHHHHHHHHHhhCCCCCc
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGAL-A-KMIPL-F-MMFAGGP-L---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG  249 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~-~-~~~~~-~-~~~~~~~-~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  249 (328)
                      ..+...++++++++||++||||++... . .+... + ....+.+ +   +++...++++|++|++++++.+++.+... 
T Consensus       154 ~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-  232 (314)
T COG0451         154 RAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-  232 (314)
T ss_pred             HHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-
Confidence            777666689999999999999986432 1 22322 2 2344554 2   45677789999999999999999987655 


Q ss_pred             eEEecCCC-ccCHHHHHHHHHHHhCCCCCC--CCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHHHH
Q 020254          250 VINGTAPN-PVRLAEMCDHLGNVLGRPSWL--PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKA  325 (328)
Q Consensus       250 ~~~i~~~~-~~~~~e~~~~i~~~~g~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~~  325 (328)
                      .||++++. +.+.+|+++.+.+.+|.+...  ..+.        ...........++..|++ .|||+|+++ +++++.+
T Consensus       233 ~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~lg~~p~~~-~~~~i~~  303 (314)
T COG0451         233 VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL--------GRRGDLREGKLLDISKARAALGWEPKVS-LEEGLAD  303 (314)
T ss_pred             EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC--------CCCCcccccccCCHHHHHHHhCCCCCCC-HHHHHHH
Confidence            99999997 899999999999999976331  1111        223344566777777775 699999985 9999998


Q ss_pred             hh
Q 020254          326 IM  327 (328)
Q Consensus       326 ~l  327 (328)
                      ++
T Consensus       304 ~~  305 (314)
T COG0451         304 TL  305 (314)
T ss_pred             HH
Confidence            75

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-36  Score=242.07  Aligned_cols=297  Identities=18%  Similarity=0.216  Sum_probs=220.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCc--ccccCCCCC--ccccCceeecCChhhHhhcC--CCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK--AELIFPGKK--TRFFPGVMIAEEPQWRDCIQ--GSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~--~~d~vi   94 (328)
                      .++++||||.||||++.++.+...  .++.+.++.-.-.  ...+.+...  ...+...|+.+...+...+.  .+|.|+
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            378999999999999999999985  3555555542211  111111110  11244556767777776664  789999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccccc-CCCC--CCCch-HHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD-ESSP--SGNDY-LAE  170 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~-e~~~--~~~~y-~~k  170 (328)
                      |+|+..+. +.+..++.+....|+.++..++++++.. .++++|||+||..|  ||++...... |.+.  |.+.| ..|
T Consensus        86 hfaa~t~v-d~s~~~~~~~~~nnil~t~~Lle~~~~s-g~i~~fvhvSTdeV--YGds~~~~~~~E~s~~nPtnpyAasK  161 (331)
T KOG0747|consen   86 HFAAQTHV-DRSFGDSFEFTKNNILSTHVLLEAVRVS-GNIRRFVHVSTDEV--YGDSDEDAVVGEASLLNPTNPYAASK  161 (331)
T ss_pred             hhHhhhhh-hhhcCchHHHhcCCchhhhhHHHHHHhc-cCeeEEEEecccce--ecCccccccccccccCCCCCchHHHH
Confidence            99997643 3344556788889999999999999985 48899999999999  9998776655 6665  45577 778


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-H-HHcCCC--C-CCCCcccccccHHHHHHHHHHHhhCC
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGP--L-GSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~--~-~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ++.|.....+...++++++++|.++||||+.... ++++-+ . ...+.+  + +++.+.++++|++|+++++..++...
T Consensus       162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg  240 (331)
T KOG0747|consen  162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG  240 (331)
T ss_pred             HHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC
Confidence            8888888888888999999999999999987554 344422 2 223333  3 89999999999999999999999997


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALK  324 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~  324 (328)
                      ..+++|||+++..++.-|+++.|.+.++++.. ...+.+..  ...+ +++.-....++.+|+++|||+|+++ |+++|+
T Consensus       241 ~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~--~v~d-Rp~nd~Ry~~~~eKik~LGw~~~~p-~~eGLr  316 (331)
T KOG0747|consen  241 ELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIF--FVED-RPYNDLRYFLDDEKIKKLGWRPTTP-WEEGLR  316 (331)
T ss_pred             CccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcce--ecCC-CCcccccccccHHHHHhcCCcccCc-HHHHHH
Confidence            66779999999999999999999999887522 22222211  1111 1111122677889999999999996 999999


Q ss_pred             HhhC
Q 020254          325 AIMS  328 (328)
Q Consensus       325 ~~l~  328 (328)
                      .+++
T Consensus       317 ktie  320 (331)
T KOG0747|consen  317 KTIE  320 (331)
T ss_pred             HHHH
Confidence            9874

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=4.1e-35  Score=247.67  Aligned_cols=243  Identities=20%  Similarity=0.242  Sum_probs=180.5

Q ss_pred             EEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccc--cCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           27 SVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        27 lI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      |||||+||||++|+++|+++|  ++|+++++++.....  ...... ..+...|++|++++.++++++|+|||+|+....
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~-~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~   79 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGV-KEYIQGDITDPESLEEALEGVDVVFHTAAPVPP   79 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccc-eeEEEeccccHHHHHHHhcCCceEEEeCccccc
Confidence            699999999999999999999  799999998765431  111111 115578999999999999999999999997422


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC-cc---cccCCCCC----CCch-HHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TE---VFDESSPS----GNDY-LAEVCR  173 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~-~~---~~~e~~~~----~~~y-~~k~~~  173 (328)
                        +.....+.++++|+.|+++++++|++  .+++++||+||.++  +++.. ..   ..+|..|.    ...| .+|...
T Consensus        80 --~~~~~~~~~~~vNV~GT~nvl~aa~~--~~VkrlVytSS~~v--v~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A  153 (280)
T PF01073_consen   80 --WGDYPPEEYYKVNVDGTRNVLEAARK--AGVKRLVYTSSISV--VFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA  153 (280)
T ss_pred             --cCcccHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcCcce--eEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence              22456788999999999999999999  79999999999998  55411 11   23555542    2345 555555


Q ss_pred             HHHHHHhcc---c--CCCeEEEEEeceEEcCCCcchhhhH-HHHHHHcCC-CCCCCCcccccccHHHHHHHHHHHhhC--
Q 020254          174 EWEGTALKV---N--KDVRLALIRIGIVLGKDGGALAKMI-PLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSN--  244 (328)
Q Consensus       174 ~~~~~~~~~---~--~~~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~~~~--  244 (328)
                      |.+......   +  ..+.+++|||+.||||++......+ ...+..... .++.+....+++|++|+|.+++.+.+.  
T Consensus       154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~  233 (280)
T PF01073_consen  154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALL  233 (280)
T ss_pred             HHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhc
Confidence            555444433   1  1489999999999999875443322 222222112 247777889999999999999987642  


Q ss_pred             -C----C-CCceEEecCCCccC-HHHHHHHHHHHhCCCC
Q 020254          245 -P----S-YRGVINGTAPNPVR-LAEMCDHLGNVLGRPS  276 (328)
Q Consensus       245 -~----~-~~g~~~i~~~~~~~-~~e~~~~i~~~~g~~~  276 (328)
                       +    . .+..|+|++++|+. ++||...+.+.+|.+.
T Consensus       234 ~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~  272 (280)
T PF01073_consen  234 EPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPP  272 (280)
T ss_pred             cccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCC
Confidence             2    2 34499999999998 9999999999999873

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=2e-34  Score=251.92  Aligned_cols=292  Identities=21%  Similarity=0.269  Sum_probs=211.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+|+||||+||||+++++.|+++|++|++++|++..........  ......|+.|.+++.++++++|+|||+|+...  
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~--   76 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLD--VEIVEGDLRDPASLRKAVAGCRALFHVAADYR--   76 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCC--ceEEEeeCCCHHHHHHHHhCCCEEEEeceecc--
Confidence            58999999999999999999999999999999876543322111  11446799999999999999999999997531  


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecC-CCcccccCCCCCC-----Cch-HHHHHHHHH
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SETEVFDESSPSG-----NDY-LAEVCREWE  176 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~-~~~~~~~e~~~~~-----~~y-~~k~~~~~~  176 (328)
                       .....+...++.|+.++.++++++.+  .+++++|++||.++  |+. ....+.+|+.+..     ..| ..|...|..
T Consensus        77 -~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        77 -LWAPDPEEMYAANVEGTRNLLRAALE--AGVERVVYTSSVAT--LGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEechhh--cCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence             12234677889999999999999998  67889999999998  885 3344677776643     245 667777776


Q ss_pred             HHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecC
Q 020254          177 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  255 (328)
Q Consensus       177 ~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~  255 (328)
                      ...+....+++++++||+.+||++..........+ ....+......+...+++|++|+|++++.++..+..+..|+++ 
T Consensus       152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~-  230 (328)
T TIGR03466       152 ALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILG-  230 (328)
T ss_pred             HHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEec-
Confidence            66665556899999999999999753221111111 2222222212234578999999999999999886544578775 


Q ss_pred             CCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHH----------hcCcce-------eeecCcccCchHHH-HCCCCccc
Q 020254          256 PNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAV----------LGEGAF-------VVLEGQRVVPARAK-ELGFPFKY  316 (328)
Q Consensus       256 ~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~----------~~~~~~-------~~~~~~~~~~~~~~-~lG~~p~~  316 (328)
                      +++++++|+++.+.+.+|++ ..+.+|.+.....          .+....       .......++++|++ .|||+|+ 
T Consensus       231 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~-  309 (328)
T TIGR03466       231 GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR-  309 (328)
T ss_pred             CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-
Confidence            67899999999999999976 4456665543211          111110       01134567888885 5999996 


Q ss_pred             ccHHHHHHHhh
Q 020254          317 RYVKDALKAIM  327 (328)
Q Consensus       317 ~~~~~~l~~~l  327 (328)
                       +++++|++++
T Consensus       310 -~~~~~i~~~~  319 (328)
T TIGR03466       310 -PAREALRDAV  319 (328)
T ss_pred             -CHHHHHHHHH
Confidence             5999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1e-35  Score=237.11  Aligned_cols=286  Identities=18%  Similarity=0.242  Sum_probs=220.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+||||.||||+||++.|..+||.|++++--.....+... ...   +..+++.--+-+..++..+|.|||+|+..
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~pl~~evD~IyhLAapa  102 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVEPLLKEVDQIYHLAAPA  102 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechhHHHHHhhhhhhhccCC
Confidence            45899999999999999999999999999999886655443332 222   45677777777888899999999999975


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC-------CCCch-HHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP-------SGNDY-LAEVC  172 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~-------~~~~y-~~k~~  172 (328)
                      ....+ ...+...+..|+.++.+++-.|++   ..+||++.||+.|  ||++...|..|+..       +.+.| ..|..
T Consensus       103 sp~~y-~~npvktIktN~igtln~lglakr---v~aR~l~aSTseV--Ygdp~~hpq~e~ywg~vnpigpr~cydegKr~  176 (350)
T KOG1429|consen  103 SPPHY-KYNPVKTIKTNVIGTLNMLGLAKR---VGARFLLASTSEV--YGDPLVHPQVETYWGNVNPIGPRSCYDEGKRV  176 (350)
T ss_pred             CCccc-ccCccceeeecchhhHHHHHHHHH---hCceEEEeecccc--cCCcccCCCccccccccCcCCchhhhhHHHHH
Confidence            44333 334567778999999999999999   3489999999999  99876666655553       35678 89999


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcch-hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .|..+..+....|+.+.|.|+.+.|||..... .+....+  +...++|+   +++.+.+++.+++|++++++.+++.+.
T Consensus       177 aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~  256 (350)
T KOG1429|consen  177 AETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDY  256 (350)
T ss_pred             HHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999975322 3344433  55677776   899999999999999999999999875


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHH-HHCCCCcccccHHHHHHH
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKA  325 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~p~~~~~~~~l~~  325 (328)
                       .+-+||++++-+|..||++.+.+..+-...+   ..... ..++.     ...+-|..++ +.|||+|+.+ ++|+|+.
T Consensus       257 -~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i---~~~~~-~~Ddp-----~kR~pDit~ake~LgW~Pkv~-L~egL~~  325 (350)
T KOG1429|consen  257 -RGPVNIGNPGEFTMLELAEMVKELIGPVSEI---EFVEN-GPDDP-----RKRKPDITKAKEQLGWEPKVS-LREGLPL  325 (350)
T ss_pred             -cCCcccCCccceeHHHHHHHHHHHcCCCcce---eecCC-CCCCc-----cccCccHHHHHHHhCCCCCCc-HHHhhHH
Confidence             6679999999999999999999998633111   01000 00110     1123344556 4699999996 9999998


Q ss_pred             hh
Q 020254          326 IM  327 (328)
Q Consensus       326 ~l  327 (328)
                      ++
T Consensus       326 t~  327 (350)
T KOG1429|consen  326 TV  327 (350)
T ss_pred             HH
Confidence            75

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=5.8e-35  Score=257.61  Aligned_cols=290  Identities=20%  Similarity=0.236  Sum_probs=208.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc----ccCC----CCCccccCceeecCChhhHhhcC--CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LIFP----GKKTRFFPGVMIAEEPQWRDCIQ--GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~----~~~~~~~~~~d~~~~~~~~~~~~--~~d   91 (328)
                      ++++|+|||||||||++|+++|+++|++|++++|......    ....    ......+..+|+.|++.+.++++  ++|
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999987643211    0000    00011244578999999988875  689


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-H
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L  168 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~  168 (328)
                      +|||+|+.... ......+...++.|+.++.++++++.+  .+++++|++||+++  ||.....+++|+.+..  ..| .
T Consensus        84 ~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~v--yg~~~~~~~~E~~~~~~~~~Y~~  158 (352)
T PLN02240         84 AVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAK--HGCKKLVFSSSATV--YGQPEEVPCTEEFPLSATNPYGR  158 (352)
T ss_pred             EEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHH--hCCCCCCCCCCCCCCCCCCHHHH
Confidence            99999986422 122345678899999999999999998  67889999999988  9876666788887653  456 6


Q ss_pred             HHHHHHHHHHHhcc-cCCCeEEEEEeceEEcCCCc---------chhhhHHHH-HHHcCC--CC---------CCCCccc
Q 020254          169 AEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFAGG--PL---------GSGQQWF  226 (328)
Q Consensus       169 ~k~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~~~~--~~---------~~~~~~~  226 (328)
                      +|...|.....+.. ..+++++++|++++||++..         ....+.+.+ ....+.  .+         .++.+.+
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  238 (352)
T PLN02240        159 TKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR  238 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEE
Confidence            67777766655433 24789999999999997421         112233333 222222  11         2567889


Q ss_pred             ccccHHHHHHHHHHHhhCC----CC-CceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecCc
Q 020254          227 SWIHLDDIVNLIYEALSNP----SY-RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQ  300 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~----~~-~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~  300 (328)
                      ++||++|+|++++.++...    .. +++||+++++++|++|+++.+.+.+|.+..+. .|..     .+     .....
T Consensus       239 ~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-----~~-----~~~~~  308 (352)
T PLN02240        239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRR-----PG-----DAEEV  308 (352)
T ss_pred             eeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCC-----CC-----Chhhh
Confidence            9999999999998887642    22 35999999999999999999999999763321 1110     00     11233


Q ss_pred             ccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          301 RVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       301 ~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ..+++|++ .|||+|+++ ++++|++++
T Consensus       309 ~~d~~k~~~~lg~~p~~~-l~~~l~~~~  335 (352)
T PLN02240        309 YASTEKAEKELGWKAKYG-IDEMCRDQW  335 (352)
T ss_pred             hcCHHHHHHHhCCCCCCC-HHHHHHHHH
Confidence            45677885 589999995 999999986

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=8.9e-35  Score=255.01  Aligned_cols=288  Identities=20%  Similarity=0.256  Sum_probs=206.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CC-CCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      |+|||||||||||++|++.|+++|++|++++|........    .. ......+...|+.|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            6899999999999999999999999999998753322111    00 00001134578889998888886  69999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---CCch-HHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC  172 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---~~~y-~~k~~  172 (328)
                      |+..... .....+.+.++.|+.++.++++++++  .+++++|++||+++  ||.....+++|+++.   ...| .+|..
T Consensus        81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--yg~~~~~~~~E~~~~~~p~~~Y~~sK~~  155 (338)
T PRK10675         81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNLIFSSSATV--YGDQPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_pred             Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHh--hCCCCCCccccccCCCCCCChhHHHHHH
Confidence            9864221 12234567889999999999999999  68889999999988  987666677887764   3456 66776


Q ss_pred             HHHHHHHhccc-CCCeEEEEEeceEEcCCCc---------chhhhHHHH-HHHcCC--CC---------CCCCccccccc
Q 020254          173 REWEGTALKVN-KDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFAGG--PL---------GSGQQWFSWIH  230 (328)
Q Consensus       173 ~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~~~~--~~---------~~~~~~~~~i~  230 (328)
                      .|.....+... .+++++++|++.+||+...         ....+.+.+ ....+.  ++         .++.+.++++|
T Consensus       156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  235 (338)
T PRK10675        156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEE
Confidence            66666655443 3789999999999997421         012233333 222221  11         24577899999


Q ss_pred             HHHHHHHHHHHhhCC--C-CCceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecCcccCchH
Q 020254          231 LDDIVNLIYEALSNP--S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPAR  306 (328)
Q Consensus       231 v~D~a~~~~~~~~~~--~-~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~  306 (328)
                      ++|+|++++.+++..  . .+++||+++++++|++|+++.+.+.+|++..+. .|...     .     ......++++|
T Consensus       236 v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~-----~~~~~~~~~~k  305 (338)
T PRK10675        236 VMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRRE-----G-----DLPAYWADASK  305 (338)
T ss_pred             HHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCC-----C-----chhhhhcCHHH
Confidence            999999999998752  2 235999999999999999999999999763221 12100     0     11234567788


Q ss_pred             HH-HCCCCcccccHHHHHHHhh
Q 020254          307 AK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       307 ~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ++ .+||+|+++ ++++|++++
T Consensus       306 ~~~~lg~~p~~~-~~~~~~~~~  326 (338)
T PRK10675        306 ADRELNWRVTRT-LDEMAQDTW  326 (338)
T ss_pred             HHHHhCCCCcCc-HHHHHHHHH
Confidence            85 589999996 999999976

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.3e-35  Score=257.46  Aligned_cols=291  Identities=19%  Similarity=0.245  Sum_probs=201.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..|+||||||+||||++++++|+++|++|++++|+..........   .....+...|+.+.+.+.++++++|+|||+|+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~   88 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA   88 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence            457999999999999999999999999999999976543322110   11111445788899999999999999999999


Q ss_pred             CCCCCC-CChhHHH-----HHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc-----ccccCCCC-----
Q 020254           99 TPIGTR-WSSEIKK-----EIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-----EVFDESSP-----  162 (328)
Q Consensus        99 ~~~~~~-~~~~~~~-----~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~-----~~~~e~~~-----  162 (328)
                      ...... ....++.     ..++.|+.++.+++++|.+. .++++||++||.++  ||....     .+++|+.+     
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~-~~~~~~v~~SS~~v--yg~~~~~~~~~~~~~E~~~~p~~~  165 (353)
T PLN02896         89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS-KTVKRVVFTSSIST--LTAKDSNGRWRAVVDETCQTPIDH  165 (353)
T ss_pred             cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc-CCccEEEEEechhh--ccccccCCCCCCccCcccCCcHHH
Confidence            753221 1112233     34456679999999999873 24789999999988  884321     24555421     


Q ss_pred             ------CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH-HHHcCCCC-----CC---CCcc
Q 020254          163 ------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL-----GS---GQQW  225 (328)
Q Consensus       163 ------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~-----~~---~~~~  225 (328)
                            +...| .+|...|.....+...++++++++||++||||+... ...++..+ ....+.+.     +.   ....
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  245 (353)
T PLN02896        166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGS  245 (353)
T ss_pred             hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCc
Confidence                  12257 889888888887777779999999999999997532 22222222 11223221     11   1123


Q ss_pred             cccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhcCcceeeecCcccCc
Q 020254          226 FSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGEGAFVVLEGQRVVP  304 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~  304 (328)
                      +++||++|+|++++.++..+...+.|++ ++.++++.|+++.+.+.++... .+.....    ..++      ....++.
T Consensus       246 ~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~----~~~~------~~~~~~~  314 (353)
T PLN02896        246 IALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEE----KRGS------IPSEISS  314 (353)
T ss_pred             eeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccccccc----ccCc------cccccCH
Confidence            6899999999999999987655568865 5677999999999999987431 1111110    0011      0123467


Q ss_pred             hHHHHCCCCcccccHHHHHHHhh
Q 020254          305 ARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       305 ~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      +++++|||+|+++ ++++|++++
T Consensus       315 ~~~~~lGw~p~~~-l~~~i~~~~  336 (353)
T PLN02896        315 KKLRDLGFEYKYG-IEEIIDQTI  336 (353)
T ss_pred             HHHHHcCCCccCC-HHHHHHHHH
Confidence            7788899999995 999999986

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.5e-34  Score=251.39  Aligned_cols=287  Identities=22%  Similarity=0.256  Sum_probs=206.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCc--ccccCC--CCCccccCceeecCChhhHhhcCC--CcEEEEC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL   96 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~   96 (328)
                      +|+||||||+||++++++|++.|  ++|++++|....  ......  ......+..+|+.|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            59999999999999999999987  789988874321  111100  000111345799999999999986  9999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcc-cccCCCCCC--Cch-HHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE-VFDESSPSG--NDY-LAEV  171 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~-~~~e~~~~~--~~y-~~k~  171 (328)
                      |+.... ......++..++.|+.++.++++++.+  ... .++|++||..+  ||..... +++|..+..  ..| .+|.
T Consensus        81 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~i~~Ss~~v--~g~~~~~~~~~e~~~~~~~~~Y~~sK~  155 (317)
T TIGR01181        81 AAESHV-DRSISGPAAFIETNVVGTYTLLEAVRK--YWHEFRFHHISTDEV--YGDLEKGDAFTETTPLAPSSPYSASKA  155 (317)
T ss_pred             ccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCceEEEeeccce--eCCCCCCCCcCCCCCCCCCCchHHHHH
Confidence            986422 223345677889999999999999988  433 37999999998  8865433 566766543  356 6777


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      ..|.....+....+++++++||+.+||+..... .+++.+  ....+.++   +++++.++++|++|+++++..++++..
T Consensus       156 ~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~  234 (317)
T TIGR01181       156 ASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR  234 (317)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC
Confidence            777776666556789999999999999975321 233322  33344443   567788999999999999999998765


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHHH
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALK  324 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~  324 (328)
                      .+++||++++++++++|+++.+.+.+|.+.. +....        ... .......++++|++ .|||+|+++ ++++++
T Consensus       235 ~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~k~~~~lG~~p~~~-~~~~i~  304 (317)
T TIGR01181       235 VGETYNIGGGNERTNLEVVETILELLGKDEDLITHVE--------DRP-GHDRRYAIDASKIKRELGWAPKYT-FEEGLR  304 (317)
T ss_pred             CCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccC--------CCc-cchhhhcCCHHHHHHHhCCCCCCc-HHHHHH
Confidence            5679999999999999999999999986421 11100        000 00112246677885 589999995 999999


Q ss_pred             Hhh
Q 020254          325 AIM  327 (328)
Q Consensus       325 ~~l  327 (328)
                      +++
T Consensus       305 ~~~  307 (317)
T TIGR01181       305 KTV  307 (317)
T ss_pred             HHH
Confidence            886

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.8e-34  Score=250.60  Aligned_cols=281  Identities=19%  Similarity=0.215  Sum_probs=197.9

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc----CCCcEEEECCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLAGTP  100 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~vi~~a~~~  100 (328)
                      |||||||||||+++++.|+++|+ +|++++|+..... ......  .....|+.+.+.++.+.    .++|+|||+|+..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~   77 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLAD--LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS   77 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhh--eeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence            69999999999999999999997 7988877654321 111000  02234555666666554    4799999999964


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC---CCCch-HHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LAEVCREWE  176 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~---~~~~y-~~k~~~~~~  176 (328)
                      .   ....++...++.|+.++.+++++|.+  .++ ++|++||+++  |+.... +.+|+++   +.+.| .+|...|..
T Consensus        78 ~---~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~-~~v~~SS~~v--y~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~  148 (314)
T TIGR02197        78 D---TTETDGEYMMENNYQYSKRLLDWCAE--KGI-PFIYASSAAT--YGDGEA-GFREGRELERPLNVYGYSKFLFDQY  148 (314)
T ss_pred             C---ccccchHHHHHHHHHHHHHHHHHHHH--hCC-cEEEEccHHh--cCCCCC-CcccccCcCCCCCHHHHHHHHHHHH
Confidence            2   23345677889999999999999998  565 7999999998  986543 4555543   34456 667666665


Q ss_pred             HHHhcc--cCCCeEEEEEeceEEcCCCcc---hhhhHHH-H-HHHcCCCC---------CCCCcccccccHHHHHHHHHH
Q 020254          177 GTALKV--NKDVRLALIRIGIVLGKDGGA---LAKMIPL-F-MMFAGGPL---------GSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       177 ~~~~~~--~~~~~~~ilRp~~v~g~~~~~---~~~~~~~-~-~~~~~~~~---------~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ...+..  ..+++++++||+.+||++...   ...++.. + ....+.++         +++++.++++|++|+++++..
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~  228 (314)
T TIGR02197       149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW  228 (314)
T ss_pred             HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence            543321  236799999999999997532   1222322 2 22333322         356778999999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCC---CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCccc
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW---LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKY  316 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~  316 (328)
                      ++.. ...++||+++++++|++|+++.+.+.+|.+..   ++.|....        .........+.+|+++ +||+|++
T Consensus       229 ~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~~l~~~p~~  299 (314)
T TIGR02197       229 LLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALR--------GKYQYFTQADITKLRAAGYYGPFT  299 (314)
T ss_pred             HHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccc--------cccccccccchHHHHHhcCCCCcc
Confidence            9987 45679999999999999999999999997531   22333210        0111234567788864 7999999


Q ss_pred             ccHHHHHHHhhC
Q 020254          317 RYVKDALKAIMS  328 (328)
Q Consensus       317 ~~~~~~l~~~l~  328 (328)
                      + ++++|+++++
T Consensus       300 ~-l~~~l~~~~~  310 (314)
T TIGR02197       300 T-LEEGVKDYVQ  310 (314)
T ss_pred             c-HHHHHHHHHH
Confidence            5 9999999873

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=4.1e-34  Score=245.16  Aligned_cols=272  Identities=18%  Similarity=0.189  Sum_probs=196.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECCCCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPIG  102 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~~  102 (328)
                      ||||+|||||||++++++|+++||+|++++|+                 ..|+.+.+.+.+++++  +|+|||+|+... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~-   62 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTD-   62 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccc-
Confidence            58999999999999999999999999999885                 1588899999998875  599999998642 


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC--ch-HHHHHHHHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGTA  179 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~~  179 (328)
                      .......+...++.|+.++.++++++++  .+. ++|++||.++  |+.....+++|++++.+  .| ..|...|.... 
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~Ss~~v--y~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~-  136 (287)
T TIGR01214        63 VDGAESDPEKAFAVNALAPQNLARAAAR--HGA-RLVHISTDYV--FDGEGKRPYREDDATNPLNVYGQSKLAGEQAIR-  136 (287)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeeeee--ecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHH-
Confidence            2222334567889999999999999988  454 8999999988  98766667888876543  34 44444443333 


Q ss_pred             hcccCCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCC-CCCceEEecC
Q 020254          180 LKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP-SYRGVINGTA  255 (328)
Q Consensus       180 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~g~~~i~~  255 (328)
                       .  .+.+++++||+.+||++...  .+... + ....+.++ ..+++.++++|++|+|+++..++..+ ..+++||+++
T Consensus       137 -~--~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~  211 (287)
T TIGR01214       137 -A--AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLAN  211 (287)
T ss_pred             -H--hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEEC
Confidence             2  36799999999999997421  12221 2 22233343 22346789999999999999999876 3577999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCCC-CCCcHH--HHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          256 PNPVRLAEMCDHLGNVLGRPSW-LPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       256 ~~~~~~~e~~~~i~~~~g~~~~-~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      ++.+++.|+++.+.+.+|.+.. ++.|..  ......... ........++++|+++ +||++.  +++++|+++++
T Consensus       212 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~lg~~~~--~~~~~l~~~~~  285 (287)
T TIGR01214       212 SGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRP-ARRPAYSVLDNTKLVKTLGTPLP--HWREALRAYLQ  285 (287)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCC-CCCCCccccchHHHHHHcCCCCc--cHHHHHHHHHh
Confidence            9999999999999999997632 221110  000000100 1111345678888876 899654  69999999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=7.3e-36  Score=253.85  Aligned_cols=270  Identities=19%  Similarity=0.258  Sum_probs=186.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      ||||||||+|+||++|.+.|.++|++|++++|+                 .+|+.|.+.+.+.+.  ++|+|||||+.. 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~-   62 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYT-   62 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------CS-TTSHHHHHHHHHHH--SEEEE------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------hcCCCCHHHHHHHHHHhCCCeEeccceee-
Confidence            799999999999999999999999999999776                 278999999998886  699999999975 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc-hHHHHHHHHHHHHh
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWEGTAL  180 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~-y~~k~~~~~~~~~~  180 (328)
                      ..+.++.+++....+|+.++.+++++|.+  .+ .++||+||..|  |+.....+++|++++.+. .+++.+.+.|....
T Consensus        63 ~~~~ce~~p~~a~~iN~~~~~~la~~~~~--~~-~~li~~STd~V--FdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~  137 (286)
T PF04321_consen   63 NVDACEKNPEEAYAINVDATKNLAEACKE--RG-ARLIHISTDYV--FDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVR  137 (286)
T ss_dssp             -HHHHHHSHHHHHHHHTHHHHHHHHHHHH--CT--EEEEEEEGGG--S-SSTSSSB-TTS----SSHHHHHHHHHHHHHH
T ss_pred             cHHhhhhChhhhHHHhhHHHHHHHHHHHH--cC-CcEEEeeccEE--EcCCcccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence            45667788999999999999999999999  44 48999999999  987777789998886553 35666666666555


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCC----CCceEEe
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS----YRGVING  253 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~g~~~i  253 (328)
                      ..  .-++.|+|++.+||+....   ++..+  ....++++ ...+..+++++++|+|+++..++++..    ..|+||+
T Consensus       138 ~~--~~~~~IlR~~~~~g~~~~~---~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~  212 (286)
T PF04321_consen  138 AA--CPNALILRTSWVYGPSGRN---FLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHL  212 (286)
T ss_dssp             HH---SSEEEEEE-SEESSSSSS---HHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE-
T ss_pred             Hh--cCCEEEEecceecccCCCc---hhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEE
Confidence            43  2389999999999995432   33222  22345554 455778899999999999999998754    2589999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCCC--CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          254 TAPNPVRLAEMCDHLGNVLGRPSWL--PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       254 ~~~~~~~~~e~~~~i~~~~g~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      ++++.+|+.||+..+.+.+|.+...  +.+.....    . ......+..++++|++. +|+++.  +|+++|+++++
T Consensus       213 ~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~----~-~~~rp~~~~L~~~kl~~~~g~~~~--~~~~~l~~~~~  283 (286)
T PF04321_consen  213 SGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFP----R-AAPRPRNTSLDCRKLKNLLGIKPP--PWREGLEELVK  283 (286)
T ss_dssp             --BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTST----T-SSGS-SBE-B--HHHHHCTTS-----BHHHHHHHHHH
T ss_pred             ecCcccCHHHHHHHHHHHhCCCCceEEecccccCC----C-CCCCCCcccccHHHHHHccCCCCc--CHHHHHHHHHH
Confidence            9999999999999999999976421  22111111    1 11123467888889976 599998  79999999863

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=8.3e-34  Score=251.67  Aligned_cols=274  Identities=19%  Similarity=0.220  Sum_probs=190.5

Q ss_pred             ccCCCeEEEE----cCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-------C--CccccCceeecCChhhHhh
Q 020254           20 KASQMTVSVT----GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------K--KTRFFPGVMIAEEPQWRDC   86 (328)
Q Consensus        20 ~~~~~~ilI~----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~--~~~~~~~~d~~~~~~~~~~   86 (328)
                      ..++|+||||    |||||||++|++.|+++||+|++++|+..........       .  ....+...|+.   ++.++
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~---d~~~~  125 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPA---DVKSK  125 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHH---HHHhh
Confidence            3456799999    9999999999999999999999999987643221100       0  00012223443   35555


Q ss_pred             c--CCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           87 I--QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        87 ~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +  .++|+|||+++.                 +..++++++++|++  .+++++||+||.++  |+.....+..|+.+..
T Consensus       126 ~~~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~--~gvkr~V~~SS~~v--yg~~~~~p~~E~~~~~  184 (378)
T PLN00016        126 VAGAGFDVVYDNNGK-----------------DLDEVEPVADWAKS--PGLKQFLFCSSAGV--YKKSDEPPHVEGDAVK  184 (378)
T ss_pred             hccCCccEEEeCCCC-----------------CHHHHHHHHHHHHH--cCCCEEEEEccHhh--cCCCCCCCCCCCCcCC
Confidence            5  479999999763                 13457899999998  78999999999998  9976656667766543


Q ss_pred             CchHHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCC---CCCCcccccccHHHHHHHHH
Q 020254          165 NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~i~v~D~a~~~~  239 (328)
                      +.. +|...|...    ...+++++++||+++||++...  .+... + ....+.++   +.+.+.++++|++|+|++++
T Consensus       185 p~~-sK~~~E~~l----~~~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~  257 (378)
T PLN00016        185 PKA-GHLEVEAYL----QKLGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFA  257 (378)
T ss_pred             Ccc-hHHHHHHHH----HHcCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHH
Confidence            332 454444332    2358999999999999997532  12111 1 33345443   56778899999999999999


Q ss_pred             HHhhCCC-CCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCc--ceeeecCcccCchHHH-HCCCCc
Q 020254          240 EALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEG--AFVVLEGQRVVPARAK-ELGFPF  314 (328)
Q Consensus       240 ~~~~~~~-~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~lG~~p  314 (328)
                      .++.++. .+++||+++++.+++.|+++.+.+.+|.+.. +..+.....  .+..  ..........+++|++ .|||+|
T Consensus       258 ~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~--~~~~~~~p~~~~~~~~d~~ka~~~LGw~p  335 (378)
T PLN00016        258 LVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVG--FGAKKAFPFRDQHFFASPRKAKEELGWTP  335 (378)
T ss_pred             HHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccC--ccccccccccccccccCHHHHHHhcCCCC
Confidence            9998864 4569999999999999999999999998632 222222111  1110  0111122335778886 489999


Q ss_pred             ccccHHHHHHHhh
Q 020254          315 KYRYVKDALKAIM  327 (328)
Q Consensus       315 ~~~~~~~~l~~~l  327 (328)
                      +++ ++|+|++++
T Consensus       336 ~~~-l~egl~~~~  347 (378)
T PLN00016        336 KFD-LVEDLKDRY  347 (378)
T ss_pred             CCC-HHHHHHHHH
Confidence            995 999999876

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.7e-33  Score=230.67  Aligned_cols=272  Identities=17%  Similarity=0.178  Sum_probs=209.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+|||||++|++|++|++.|. .+++|++++|..                 +|++|++.+.+.+.  +||+|||+|+++ 
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt-   61 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------LDITDPDAVLEVIRETRPDVVINAAAYT-   61 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------ccccChHHHHHHHHhhCCCEEEECcccc-
Confidence            459999999999999999998 679999998865                 79999999999996  799999999986 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc-hHHHHHHHHHHHHh
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWEGTAL  180 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~-y~~k~~~~~~~~~~  180 (328)
                      ..+.++..++..+.+|..++.+++++|.+  .+. ++||+||..|  |....+.++.|++++.|. +|++.+...|....
T Consensus        62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~--~ga-~lVhiSTDyV--FDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~  136 (281)
T COG1091          62 AVDKAESEPELAFAVNATGAENLARAAAE--VGA-RLVHISTDYV--FDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVR  136 (281)
T ss_pred             ccccccCCHHHHHHhHHHHHHHHHHHHHH--hCC-eEEEeecceE--ecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Confidence            55677888999999999999999999999  444 7999999999  888877889998886553 24444444444333


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCc
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNP  258 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~  258 (328)
                      .  .+-...|+|.+++||..++.+..  ..+ ....++++ ...++..+++++.|+|+++..++......|+||+++...
T Consensus       137 ~--~~~~~~I~Rtswv~g~~g~nFv~--tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~  212 (281)
T COG1091         137 A--AGPRHLILRTSWVYGEYGNNFVK--TMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGE  212 (281)
T ss_pred             H--hCCCEEEEEeeeeecCCCCCHHH--HHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCc
Confidence            3  35789999999999997633321  122 22345555 566888999999999999999999877677999999888


Q ss_pred             cCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          259 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       259 ~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      +||.||+..|.+.++.+..+..|.....  .+. .-....++.++.+|+++ +|+.|.  +|+++++.+++
T Consensus       213 ~Swydfa~~I~~~~~~~~~v~~~~~~~~--~~~-~a~RP~~S~L~~~k~~~~~g~~~~--~w~~~l~~~~~  278 (281)
T COG1091         213 CSWYEFAKAIFEEAGVDGEVIEPIASAE--YPT-PAKRPANSSLDTKKLEKAFGLSLP--EWREALKALLD  278 (281)
T ss_pred             ccHHHHHHHHHHHhCCCccccccccccc--cCc-cCCCCcccccchHHHHHHhCCCCc--cHHHHHHHHHh
Confidence            9999999999999986642211111100  011 01122456677788854 799888  79999999874

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=3.5e-33  Score=244.02  Aligned_cols=288  Identities=20%  Similarity=0.238  Sum_probs=206.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhcC--CCcEEEECCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT   99 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~   99 (328)
                      +||||||||+||++++++|+++|++|++++|.............   ......+|+.+.+.+.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            58999999999999999999999999988764433221111100   01133578889999988886  69999999996


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWE  176 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~  176 (328)
                      .... .....+...++.|+.++.++++++.+  .+++++|++||.++  ||.....+++|+.+.  ...| .+|...|..
T Consensus        81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~ss~~~--~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~  155 (328)
T TIGR01179        81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQ--TGVKKFIFSSSAAV--YGEPSSIPISEDSPLGPINPYGRSKLMSERI  155 (328)
T ss_pred             cCcc-hhhcCchhhhhhhHHHHHHHHHHHHh--cCCCEEEEecchhh--cCCCCCCCccccCCCCCCCchHHHHHHHHHH
Confidence            4322 22234566788999999999999998  67789999999888  887665567777764  3456 777777777


Q ss_pred             HHHhccc-CCCeEEEEEeceEEcCCCcc--------hhhhHHHH-HHHc--CC---------CCCCCCcccccccHHHHH
Q 020254          177 GTALKVN-KDVRLALIRIGIVLGKDGGA--------LAKMIPLF-MMFA--GG---------PLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       177 ~~~~~~~-~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~-~~~~--~~---------~~~~~~~~~~~i~v~D~a  235 (328)
                      ...+... .+++++++||+.+||+....        ...+++.+ ....  ..         +..++...+++||++|++
T Consensus       156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            6666554 68999999999999985321        12233322 2221  11         123556778999999999


Q ss_pred             HHHHHHhhCC---CCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecCcccCchHHH-HC
Q 020254          236 NLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK-EL  310 (328)
Q Consensus       236 ~~~~~~~~~~---~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l  310 (328)
                      +++..++...   ..+++||+++++++|++|+++.+.+.+|++..+. .|..     .++     ......+++|++ .|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~l  305 (328)
T TIGR01179       236 DAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR-----PGD-----PASLVADASKIRREL  305 (328)
T ss_pred             HHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC-----Ccc-----ccchhcchHHHHHHh
Confidence            9999998752   2356999999999999999999999999763221 1211     001     112335677775 58


Q ss_pred             CCCcccccHHHHHHHhh
Q 020254          311 GFPFKYRYVKDALKAIM  327 (328)
Q Consensus       311 G~~p~~~~~~~~l~~~l  327 (328)
                      ||+|++++++++|++++
T Consensus       306 g~~p~~~~l~~~~~~~~  322 (328)
T TIGR01179       306 GWQPKYTDLEIIIKTAW  322 (328)
T ss_pred             CCCCCcchHHHHHHHHH
Confidence            99999966999999976

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3e-32  Score=231.21  Aligned_cols=298  Identities=21%  Similarity=0.251  Sum_probs=215.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      .+.+++||||+||+|++|+++|++++  .+|++++..+.........    .......++|+.|...+.++++++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            45689999999999999999999988  8999999987632211110    111124457888999999999999 8888


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC----Cch-HHH
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG----NDY-LAE  170 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~----~~y-~~k  170 (328)
                      ||+.. ........++..+++|+.+|++++++|.+  .+++++||+||..|.+.|.. ....+|+.|.+    +.| .+|
T Consensus        82 ~aa~~-~~~~~~~~~~~~~~vNV~gT~nvi~~c~~--~~v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p~~~~d~Y~~sK  157 (361)
T KOG1430|consen   82 CAASP-VPDFVENDRDLAMRVNVNGTLNVIEACKE--LGVKRLIYTSSAYVVFGGEP-IINGDESLPYPLKHIDPYGESK  157 (361)
T ss_pred             ecccc-CccccccchhhheeecchhHHHHHHHHHH--hCCCEEEEecCceEEeCCee-cccCCCCCCCccccccccchHH
Confidence            88865 44555557889999999999999999999  89999999999999655543 22345544422    244 555


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhh---
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALS---  243 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~---  243 (328)
                      ...|......+...++..++|||+.||||++.... .+...++  .+..   ++.++...++++++.++.+.+.+..   
T Consensus       158 a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~--~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~  235 (361)
T KOG1430|consen  158 ALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALK--NGGFLFKIGDGENLNDFTYGENVAWAHILAARALL  235 (361)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHH--ccCceEEeeccccccceEEechhHHHHHHHHHHHH
Confidence            55555555555445799999999999999985432 2222222  2332   2666788899999999998887643   


Q ss_pred             --CCCCCc-eEEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHH----------hc--C------cceeeecCc
Q 020254          244 --NPSYRG-VINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAV----------LG--E------GAFVVLEGQ  300 (328)
Q Consensus       244 --~~~~~g-~~~i~~~~~~~~~e~~~~i~~~~g~~~~--~~~p~~~~~~~----------~~--~------~~~~~~~~~  300 (328)
                        .+...| +|+|.++.++...+++..+.+.+|.+.+  +..|.+.....          .+  .      .........
T Consensus       236 ~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~  315 (361)
T KOG1430|consen  236 DKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTR  315 (361)
T ss_pred             hcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeecccc
Confidence              233444 9999999999999999999999998854  56665543321          11  0      002233456


Q ss_pred             ccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          301 RVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       301 ~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      .++.+|++ +|||+|..+ +++++.+++
T Consensus       316 ~f~~~kA~~~lgY~P~~~-~~e~~~~~~  342 (361)
T KOG1430|consen  316 TFSIEKAKRELGYKPLVS-LEEAIQRTI  342 (361)
T ss_pred             ccCHHHHHHhhCCCCcCC-HHHHHHHHH
Confidence            67778885 699999996 999998875

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=6.5e-33  Score=226.50  Aligned_cols=291  Identities=21%  Similarity=0.235  Sum_probs=223.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-------ccCCCCCccccCceeecCChhhHhhcC--CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~v   93 (328)
                      .++||||||+||||+|.+-+|+++|+.|.+++.-.....       .+........+..+|+.|.+.++++++  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            468999999999999999999999999999987544321       111212222356789999999999997  79999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC---CCCch-HH
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LA  169 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~---~~~~y-~~  169 (328)
                      +|+|+.- ....+...+..+...|+.++.++++.+++  .+++.+||.||+.+  ||.+...|++|+.|   +.+.| ..
T Consensus        82 ~Hfa~~~-~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~--~~~~~~V~sssatv--YG~p~~ip~te~~~t~~p~~pyg~t  156 (343)
T KOG1371|consen   82 MHFAALA-AVGESMENPLSYYHNNIAGTLNLLEVMKA--HNVKALVFSSSATV--YGLPTKVPITEEDPTDQPTNPYGKT  156 (343)
T ss_pred             Eeehhhh-ccchhhhCchhheehhhhhHHHHHHHHHH--cCCceEEEecceee--ecCcceeeccCcCCCCCCCCcchhh
Confidence            9999964 44556677789999999999999999999  78999999999999  99999899999887   45677 78


Q ss_pred             HHHHHHHHHHhcccCCCeEEEEEeceEEc--CCC-------cchhhhHHHH-HHHc---------CCCC--CCCCccccc
Q 020254          170 EVCREWEGTALKVNKDVRLALIRIGIVLG--KDG-------GALAKMIPLF-MMFA---------GGPL--GSGQQWFSW  228 (328)
Q Consensus       170 k~~~~~~~~~~~~~~~~~~~ilRp~~v~g--~~~-------~~~~~~~~~~-~~~~---------~~~~--~~~~~~~~~  228 (328)
                      |...|......+...++.++.||..+++|  |.+       +..+++.+.. +...         +.+.  .++...+++
T Consensus       157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy  236 (343)
T KOG1371|consen  157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY  236 (343)
T ss_pred             hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence            88888888888888889999999999999  322       1123333222 1111         1122  456888999


Q ss_pred             ccHHHHHHHHHHHhhCCC---CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCch
Q 020254          229 IHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPA  305 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  305 (328)
                      ||+-|+|+..+.++....   ..++||++++...++.+|+..+++++|.+...    .......|+......+..+    
T Consensus       237 i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~----~~v~~R~gdv~~~ya~~~~----  308 (343)
T KOG1371|consen  237 IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK----KVVPRRNGDVAFVYANPSK----  308 (343)
T ss_pred             eeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc----cccCCCCCCceeeeeChHH----
Confidence            999999999999998754   34599999999999999999999999987322    2222223443333333332    


Q ss_pred             HHHHCCCCcccccHHHHHHHhh
Q 020254          306 RAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       306 ~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      +.++|||+|.+. ++++++++.
T Consensus       309 a~~elgwk~~~~-iee~c~dlw  329 (343)
T KOG1371|consen  309 AQRELGWKAKYG-LQEMLKDLW  329 (343)
T ss_pred             HHHHhCCccccC-HHHHHHHHH
Confidence            257899999996 999999875

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=2.4e-32  Score=237.22  Aligned_cols=271  Identities=17%  Similarity=0.202  Sum_probs=191.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCC--CCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +.|+||||||+||||++++++|+++|  ++|++++|+......+...  .....+..+|+.|.+.+.++++++|+|||+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            35789999999999999999999986  7999999876543211100  0111244679999999999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  176 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  176 (328)
                      |.... .....++...+++|+.++.++++++.+  .+++++|++||...  +.            +.+.| .+|...|..
T Consensus        83 g~~~~-~~~~~~~~~~~~~Nv~g~~~ll~aa~~--~~~~~iV~~SS~~~--~~------------p~~~Y~~sK~~~E~l  145 (324)
T TIGR03589        83 ALKQV-PAAEYNPFECIRTNINGAQNVIDAAID--NGVKRVVALSTDKA--AN------------PINLYGATKLASDKL  145 (324)
T ss_pred             ccCCC-chhhcCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeCCCC--CC------------CCCHHHHHHHHHHHH
Confidence            96422 223445568899999999999999998  67889999999643  11            22457 777777766


Q ss_pred             HHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC---CCCCCCcccccccHHHHHHHHHHHhhCCCCCce
Q 020254          177 GTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  250 (328)
Q Consensus       177 ~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~  250 (328)
                      ...+.   ...|++++++||+++|||+......+..  ....+.   ++.++.+.++++|++|++++++.+++....+.+
T Consensus       146 ~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~--~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~  223 (324)
T TIGR03589       146 FVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKS--LKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGEI  223 (324)
T ss_pred             HHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHH--HHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCCE
Confidence            64432   3468999999999999997532222222  122233   346677889999999999999999987533347


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHH-HHCCCCcccccHHHHHHH
Q 020254          251 INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKA  325 (328)
Q Consensus       251 ~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~p~~~~~~~~l~~  325 (328)
                      | ++++..+++.|+++.+.+....+. .+.+       .++.    .....++.+|+ +.|||+|+++ ++++++.
T Consensus       224 ~-~~~~~~~sv~el~~~i~~~~~~~~-~~~~-------~g~~----~~~~~~~~~~~~~~lg~~~~~~-l~~~~~~  285 (324)
T TIGR03589       224 F-VPKIPSMKITDLAEAMAPECPHKI-VGIR-------PGEK----LHEVMITEDDARHTYELGDYYA-ILPSISF  285 (324)
T ss_pred             E-ccCCCcEEHHHHHHHHHhhCCeeE-eCCC-------CCch----hHhhhcChhhhhhhcCCCCeEE-Ecccccc
Confidence            7 566667999999999998654321 0111       0110    01133566667 4599999995 9988763

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.8e-32  Score=241.53  Aligned_cols=286  Identities=15%  Similarity=0.112  Sum_probs=194.1

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---------CCccccCceeecCChhhHhhcCC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDCIQG   89 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~   89 (328)
                      ...++|+||||||+||||++|++.|+++||+|++++|+......+...         .....+...|+.|.+.+.+++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            345678999999999999999999999999999988875432221100         00012445799999999999999


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC--Cc--ccccCCCC---
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--ET--EVFDESSP---  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~--~~--~~~~e~~~---  162 (328)
                      +|.|||+|+...... .........+.|+.++.+++++|.+. .+++++||+||.....||..  ..  .+++|+.+   
T Consensus       129 ~d~V~hlA~~~~~~~-~~~~~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~  206 (367)
T PLN02686        129 CAGVFHTSAFVDPAG-LSGYTKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE  206 (367)
T ss_pred             ccEEEecCeeecccc-cccccchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence            999999998642211 11122455678999999999999882 26899999999743237642  11  23455432   


Q ss_pred             -----CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          163 -----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       163 -----~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                           +...| .+|...|.....+....+++++++||++||||+..... .........+.....++..++++||+|+|+
T Consensus       207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~-~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~  285 (367)
T PLN02686        207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN-STATIAYLKGAQEMLADGLLATADVERLAE  285 (367)
T ss_pred             hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC-ChhHHHHhcCCCccCCCCCcCeEEHHHHHH
Confidence                 22357 77888888877766667999999999999999742211 111112223322111233467999999999


Q ss_pred             HHHHHhhCC---CCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCC
Q 020254          237 LIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGF  312 (328)
Q Consensus       237 ~~~~~~~~~---~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~  312 (328)
                      +++.+++..   ..+++| +++++.++++|+++.+.+.+|.+.........   ..++     .....++++|++ .|||
T Consensus       286 A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~---~~~d-----~~~~~~d~~kl~~~l~~  356 (367)
T PLN02686        286 AHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSS---SDDT-----PARFELSNKKLSRLMSR  356 (367)
T ss_pred             HHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchh---hcCC-----cccccccHHHHHHHHHH
Confidence            999999852   245588 88888999999999999999976322111110   0111     133556677885 5899


Q ss_pred             Cccc
Q 020254          313 PFKY  316 (328)
Q Consensus       313 ~p~~  316 (328)
                      +|+-
T Consensus       357 ~~~~  360 (367)
T PLN02686        357 TRRC  360 (367)
T ss_pred             hhhc
Confidence            9874

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.4e-31  Score=232.08  Aligned_cols=271  Identities=16%  Similarity=0.140  Sum_probs=187.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+|+|||||||||++++++|+++||+|++++|++.+...+....  ..+...|+.|++++.++++++|+|||+++...  
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~--   76 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWG--AELVYGDLSLPETLPPSFKGVTAIIDASTSRP--   76 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcC--CEEEECCCCCHHHHHHHHCCCCEEEECCCCCC--
Confidence            68999999999999999999999999999999875433221111  12445799999999999999999999976421  


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhcc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV  182 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~  182 (328)
                          ..+....+.|+.++.+++++|++  .+++++|++||.+...|+.             ..| ..|...  +...  .
T Consensus        77 ----~~~~~~~~~~~~~~~~l~~aa~~--~gvkr~I~~Ss~~~~~~~~-------------~~~~~~K~~~--e~~l--~  133 (317)
T CHL00194         77 ----SDLYNAKQIDWDGKLALIEAAKA--AKIKRFIFFSILNAEQYPY-------------IPLMKLKSDI--EQKL--K  133 (317)
T ss_pred             ----CCccchhhhhHHHHHHHHHHHHH--cCCCEEEEeccccccccCC-------------ChHHHHHHHH--HHHH--H
Confidence                12345677899999999999999  7899999999865411211             112 333333  3322  2


Q ss_pred             cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC--CCCCcccccccHHHHHHHHHHHhhCCC-CCceEEecCCCcc
Q 020254          183 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV  259 (328)
Q Consensus       183 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~i~~~~~~  259 (328)
                      .++++++++||+.+|+.-.   ..+.  .....+.++  ..+.+.+++||++|+|+++..++..+. .+++||+++++++
T Consensus       134 ~~~l~~tilRp~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~  208 (317)
T CHL00194        134 KSGIPYTIFRLAGFFQGLI---SQYA--IPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSW  208 (317)
T ss_pred             HcCCCeEEEeecHHhhhhh---hhhh--hhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCcc
Confidence            3689999999998875411   1111  111223332  455677899999999999999998765 4569999999999


Q ss_pred             CHHHHHHHHHHHhCCC-CCCCCcHHHHHHH---hc---Ccc---e-------eeecCcc-cCchHH-HHCCCCcc--ccc
Q 020254          260 RLAEMCDHLGNVLGRP-SWLPVPEFALKAV---LG---EGA---F-------VVLEGQR-VVPARA-KELGFPFK--YRY  318 (328)
Q Consensus       260 ~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~---~~---~~~---~-------~~~~~~~-~~~~~~-~~lG~~p~--~~~  318 (328)
                      |++|+++.+.+.+|++ ....+|.+..+..   .+   ...   .       ....+.. .+.++. +.+|+.|.  . +
T Consensus       209 s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~-~  287 (317)
T CHL00194        209 NSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELI-S  287 (317)
T ss_pred             CHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhh-h
Confidence            9999999999999987 3345666554321   11   100   0       0112122 234555 45899984  3 5


Q ss_pred             HHHHHHHhh
Q 020254          319 VKDALKAIM  327 (328)
Q Consensus       319 ~~~~l~~~l  327 (328)
                      +++++++.+
T Consensus       288 ~~~~~~~~~  296 (317)
T CHL00194        288 LEDYFQEYF  296 (317)
T ss_pred             HHHHHHHHH
Confidence            999988765

>PLN02583 cinnamoyl-CoA reductase

Probab=99.98  E-value=1.5e-30  Score=223.41  Aligned_cols=274  Identities=16%  Similarity=0.133  Sum_probs=190.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc------ccCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      +.++|+|||||||||++++++|+++||+|++++|+.....      .+........+...|+.|.+.+.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4578999999999999999999999999999999643211      1110011112345799999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC---CcccccCCCCCCC-------
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS---ETEVFDESSPSGN-------  165 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~---~~~~~~e~~~~~~-------  165 (328)
                      +++.....   ...++..++.|+.++.++++++.+. .+++++|++||.+...|+..   ...+++|+.+..+       
T Consensus        85 ~~~~~~~~---~~~~~~~~~~nv~gt~~ll~aa~~~-~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  160 (297)
T PLN02583         85 CFDPPSDY---PSYDEKMVDVEVRAAHNVLEACAQT-DTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK  160 (297)
T ss_pred             eCccCCcc---cccHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcc
Confidence            87643211   1235688999999999999999873 25789999999876323421   2235677654321       


Q ss_pred             -ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          166 -DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       166 -~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .| .+|...|.....+....+++++++||++||||+......      ...+.+...+...+++|||+|+|++++.+++
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~  234 (297)
T PLN02583        161 LWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP------YLKGAAQMYENGVLVTVDVNFLVDAHIRAFE  234 (297)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh------hhcCCcccCcccCcceEEHHHHHHHHHHHhc
Confidence             36 667777777766655569999999999999997532111      1122221122335679999999999999999


Q ss_pred             CCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCc
Q 020254          244 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF  314 (328)
Q Consensus       244 ~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p  314 (328)
                      .+...|.|+++++....+.++++.+.+.+..-   ++|........      ......++++|+++||++.
T Consensus       235 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~------~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        235 DVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI---PSPPPYEMQGS------EVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             CcccCCcEEEecCCCccHHHHHHHHHHhCCCC---CCCCcccccCC------CccccccChHHHHHhCccc
Confidence            87777799998877566788999999887632   22211000000      1134567889999999975

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.98  E-value=1.5e-30  Score=200.90  Aligned_cols=292  Identities=58%  Similarity=0.947  Sum_probs=244.1

Q ss_pred             CeEEEEcCCchhHHHHHH-----HHHhCC----CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           24 MTVSVTGATGFIGRRLVQ-----RLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      .+-++-+++|+|+..|..     ++-+.+    |.|++++|++.+.+.......   +.++-+       .....+.++.
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~---~~Gip~-------sc~a~vna~g   82 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELD---FPGIPI-------SCVAGVNAVG   82 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhc---CCCCce-------ehHHHHhhhh
Confidence            456677899999998887     554444    899999999987665443322   222111       1112233444


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC-chHHHHHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DYLAEVCR  173 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~-~y~~k~~~  173 (328)
                      +++..+ ..+|++...+++...-+..++.+++++.+.....+.+|.+|..++  |-+.....|+|+.+... +|.++.+.
T Consensus        83 ~n~l~P-~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~--y~pS~s~eY~e~~~~qgfd~~srL~l  159 (315)
T KOG3019|consen   83 NNALLP-IRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAV--YVPSESQEYSEKIVHQGFDILSRLCL  159 (315)
T ss_pred             hhccCc-hhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEE--eccccccccccccccCChHHHHHHHH
Confidence            444443 247888888888888899999999999986566778999999887  99888888999888654 56888999


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEe
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  253 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i  253 (328)
                      ++|..........+++++|.|.|.|.+++.+..++..++...|.|+++++++++|||++|++..+..+++++...|+.|-
T Consensus       160 ~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNg  239 (315)
T KOG3019|consen  160 EWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVING  239 (315)
T ss_pred             HHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecc
Confidence            99998877766799999999999999999999999999999999999999999999999999999999999888999999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhc-CcceeeecCcccCchHHHHCCCCcccccHHHHHHHhhC
Q 020254          254 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       254 ~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      ..+++++..||.+.++++++++.++++|++.+.+..| +-....+..+++.+.|+.++||+++|+++.++++++++
T Consensus       240 vAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~~  315 (315)
T KOG3019|consen  240 VAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIMQ  315 (315)
T ss_pred             cCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHhC
Confidence            9999999999999999999999999999999999988 66677889999999999999999999999999999864

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.98  E-value=7.9e-32  Score=224.44  Aligned_cols=223  Identities=28%  Similarity=0.393  Sum_probs=176.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECCCCCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPIGT  103 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~~~  103 (328)
                      |||+|||||||++++++|+++|+.|+.+.|+........... ...+..+|+.|.+.+++++++  +|+|||+|+... .
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~-~   78 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSS-N   78 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSS-H
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-eEEEEEeeccccccccccccccCceEEEEeecccc-c
Confidence            799999999999999999999999999999887654321100 011456799999999999974  599999998642 1


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHHHHHHHHh
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~  180 (328)
                      ...........+.|+.++.++++++.+  .+++++|++||+.+  |+.....+++|+++.  .+.| ..|...|.....+
T Consensus        79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~sS~~~--y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~  154 (236)
T PF01370_consen   79 PESFEDPEEIIEANVQGTRNLLEAARE--AGVKRFIFLSSASV--YGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDY  154 (236)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHH--HTTSEEEEEEEGGG--GTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc--cccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence            112245678889999999999999999  67899999999998  998877778888875  3456 7777777777777


Q ss_pred             cccCCCeEEEEEeceEEcCC--CcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCC-CCceEE
Q 020254          181 KVNKDVRLALIRIGIVLGKD--GGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVIN  252 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~--~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~  252 (328)
                      ...++++++++||+.+||+.  ......+++.+  ....++++   +++++.++++|++|+|++++.+++++. .+++||
T Consensus       155 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yN  234 (236)
T PF01370_consen  155 AKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYN  234 (236)
T ss_dssp             HHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred             ccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEE
Confidence            76679999999999999998  11222333333  44456653   788999999999999999999999988 678999


Q ss_pred             ec
Q 020254          253 GT  254 (328)
Q Consensus       253 i~  254 (328)
                      |+
T Consensus       235 ig  236 (236)
T PF01370_consen  235 IG  236 (236)
T ss_dssp             ES
T ss_pred             eC
Confidence            85

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK05865 hypothetical protein; Provisional

Probab=99.97  E-value=2.1e-30  Score=243.78  Aligned_cols=247  Identities=20%  Similarity=0.273  Sum_probs=179.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+|+|||||||||++++++|+++|++|++++|+......  ..   ..+..+|+.|.+.+.++++++|+|||+|+...  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~--~~---v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~--   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWP--SS---ADFIAADIRDATAVESAMTGADVVAHCAWVRG--   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcc--cC---ceEEEeeCCCHHHHHHHHhCCCEEEECCCccc--
Confidence            589999999999999999999999999999997543211  11   12556899999999999999999999998531  


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhccc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  183 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  183 (328)
                              ...++|+.++.++++++++  .+++++|++||.+                        |...|...    ..
T Consensus        74 --------~~~~vNv~GT~nLLeAa~~--~gvkr~V~iSS~~------------------------K~aaE~ll----~~  115 (854)
T PRK05865         74 --------RNDHINIDGTANVLKAMAE--TGTGRIVFTSSGH------------------------QPRVEQML----AD  115 (854)
T ss_pred             --------chHHHHHHHHHHHHHHHHH--cCCCeEEEECCcH------------------------HHHHHHHH----HH
Confidence                    1457899999999999999  6888999999852                        33333322    23


Q ss_pred             CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCC-CCceEEecCCCcc
Q 020254          184 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV  259 (328)
Q Consensus       184 ~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~i~~~~~~  259 (328)
                      ++++++++||+++||++..   .++...   ...++   +.....+++||++|+|+++..++..+. .+++||+++++.+
T Consensus       116 ~gl~~vILRp~~VYGP~~~---~~i~~l---l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~  189 (854)
T PRK05865        116 CGLEWVAVRCALIFGRNVD---NWVQRL---FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGEL  189 (854)
T ss_pred             cCCCEEEEEeceEeCCChH---HHHHHH---hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcc
Confidence            5899999999999999632   122111   11222   344566799999999999999987543 4679999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcc--eeeecCcccCchHHH-HCCCCcccccHHHHHHHhhC
Q 020254          260 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       260 ~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~~~l~  328 (328)
                      |++|+++.+.+...     +.+..... ..++..  ........++++|++ .|||+|+++ ++++|+++++
T Consensus       190 Si~EIae~l~~~~~-----~v~~~~~~-~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~s-LeeGL~dti~  254 (854)
T PRK05865        190 TFRRIAAALGRPMV-----PIGSPVLR-RVTSFAELELLHSAPLMDVTLLRDRWGFQPAWN-AEECLEDFTL  254 (854)
T ss_pred             cHHHHHHHHhhhhc-----cCCchhhh-hccchhhhhcccCCccCCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            99999999887432     11111111 011110  111223457888885 589999995 9999999863

>PLN02778 3,5-epimerase/4-reductase

Probab=99.97  E-value=9.7e-29  Score=211.74  Aligned_cols=264  Identities=16%  Similarity=0.163  Sum_probs=179.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   98 (328)
                      .+.|+||||||+||||++|++.|+++|++|+...+                    ++.|.+.+...++  ++|+|||+|+
T Consensus         7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------~~~~~~~v~~~l~~~~~D~ViH~Aa   66 (298)
T PLN02778          7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------RLENRASLEADIDAVKPTHVFNAAG   66 (298)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------ccCCHHHHHHHHHhcCCCEEEECCc
Confidence            34579999999999999999999999999975321                    2233344555554  7999999999


Q ss_pred             CCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC------cccccCCCCC---CCch
Q 020254           99 TPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE------TEVFDESSPS---GNDY  167 (328)
Q Consensus        99 ~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~------~~~~~e~~~~---~~~y  167 (328)
                      .....  .++..++...++.|+.++.+++++|++  .+++ ++++||+++  |+...      ..+++|++++   .+.|
T Consensus        67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~--~gv~-~v~~sS~~v--y~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRE--RGLV-LTNYATGCI--FEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCC-EEEEecceE--eCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            75432  234567789999999999999999999  6664 677888887  65321      2246665543   2456


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                       .+|...|.....+.     +..++|+..++|++......++.  ....+.++..  ...+++|++|++++++.++....
T Consensus       142 g~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~~~~fi~--~~~~~~~~~~--~~~s~~yv~D~v~al~~~l~~~~  212 (298)
T PLN02778        142 SKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSNPRNFIT--KITRYEKVVN--IPNSMTILDELLPISIEMAKRNL  212 (298)
T ss_pred             HHHHHHHHHHHHHhh-----ccEEeeecccCCcccccHHHHHH--HHHcCCCeeE--cCCCCEEHHHHHHHHHHHHhCCC
Confidence             67777776665432     56788998888865332223332  2333433211  11379999999999999997654


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCC---CCCCCcHHHHHHHhcCcceeeecCcccCchHHHHC-CCCcccccHHHH
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL-GFPFKYRYVKDA  322 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~p~~~~~~~~  322 (328)
                       .|+||+++++.+|++|+++.+.+.+|..   ..+.+++.......+.      ....++.+|++++ +-.+.  ..+++
T Consensus       213 -~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~Ld~~k~~~~~~~~~~--~~~~~  283 (298)
T PLN02778        213 -TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPR------SNNELDTTKLKREFPELLP--IKESL  283 (298)
T ss_pred             -CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCC------ccccccHHHHHHhcccccc--hHHHH
Confidence             5799999999999999999999999964   2234442211111111      1225888888765 44344  46777


Q ss_pred             HHHhh
Q 020254          323 LKAIM  327 (328)
Q Consensus       323 l~~~l  327 (328)
                      ++..+
T Consensus       284 ~~~~~  288 (298)
T PLN02778        284 IKYVF  288 (298)
T ss_pred             HHHHH
Confidence            77654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=1.5e-29  Score=195.31  Aligned_cols=273  Identities=18%  Similarity=0.233  Sum_probs=209.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   98 (328)
                      +|+|||+|++|.+|++|.+.+.++|.  +-.++..                ...+|+++..+.++++.  ++..|||+|+
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~----------------skd~DLt~~a~t~~lF~~ekPthVIhlAA   64 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG----------------SKDADLTNLADTRALFESEKPTHVIHLAA   64 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec----------------cccccccchHHHHHHHhccCCceeeehHh
Confidence            47999999999999999999999875  2112211                11279999999999885  7999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC----CCCC-c--h-HHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN-D--Y-LAE  170 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~----~~~~-~--y-~~k  170 (328)
                      ..+.-.-...++.+++..|+.---|++..|-+  +++++++++-|+++  |.+....|++|..    |+.+ .  | ++|
T Consensus        65 mVGGlf~N~~ynldF~r~Nl~indNVlhsa~e--~gv~K~vsclStCI--fPdkt~yPIdEtmvh~gpphpsN~gYsyAK  140 (315)
T KOG1431|consen   65 MVGGLFHNNTYNLDFIRKNLQINDNVLHSAHE--HGVKKVVSCLSTCI--FPDKTSYPIDETMVHNGPPHPSNFGYSYAK  140 (315)
T ss_pred             hhcchhhcCCCchHHHhhcceechhHHHHHHH--hchhhhhhhcceee--cCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence            87665555667789999999999999999999  89999999999999  9988888888754    3322 2  3 566


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhhHHHH------HHHcCC-CC---CCCCcccccccHHHHHHH
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF------MMFAGG-PL---GSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~------~~~~~~-~~---~~~~~~~~~i~v~D~a~~  237 (328)
                      .........+...+|..++.+-|.++|||.++..   +..++.+      ....+- ++   +.+...+.++|++|+|++
T Consensus       141 r~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l  220 (315)
T KOG1431|consen  141 RMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADL  220 (315)
T ss_pred             HHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHH
Confidence            5555555666677899999999999999987532   2233322      111222 32   788889999999999999


Q ss_pred             HHHHhhCCCCCceEEecCCC--ccCHHHHHHHHHHHhCCCCCCC----CcHHHHHHHhcCcceeeecCcccCchHHHHCC
Q 020254          238 IYEALSNPSYRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWLP----VPEFALKAVLGEGAFVVLEGQRVVPARAKELG  311 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~i~~~~--~~~~~e~~~~i~~~~g~~~~~~----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG  311 (328)
                      +++++.+-+.-+-.+++.++  .+|++|+++++.++.+....+.    .|+...+             ...+++|+++++
T Consensus       221 ~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~k-------------KtasnsKL~sl~  287 (315)
T KOG1431|consen  221 FIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFK-------------KTASNSKLRSLL  287 (315)
T ss_pred             HHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcc-------------cccchHHHHHhC
Confidence            99999986544577787776  7999999999999998763321    2222222             356778999999


Q ss_pred             CCcccccHHHHHHHhhC
Q 020254          312 FPFKYRYVKDALKAIMS  328 (328)
Q Consensus       312 ~~p~~~~~~~~l~~~l~  328 (328)
                      |.|++++++++|.++++
T Consensus       288 pd~~ft~l~~ai~~t~~  304 (315)
T KOG1431|consen  288 PDFKFTPLEQAISETVQ  304 (315)
T ss_pred             CCcccChHHHHHHHHHH
Confidence            99999889999998763

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8e-28  Score=228.86  Aligned_cols=250  Identities=22%  Similarity=0.246  Sum_probs=173.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHH--hCCCeEEEEecCCCccc--ccCCC-C-CccccCceeecCC------hhhHhhcCCCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQ--ADNHQVRVLTRSRSKAE--LIFPG-K-KTRFFPGVMIAEE------PQWRDCIQGST   91 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~--~~~~~-~-~~~~~~~~d~~~~------~~~~~~~~~~d   91 (328)
                      |+|||||||||||++|+++|+  +.|++|++++|+.....  ..... . ....+...|+.|+      +.++++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            589999999999999999999  57999999999654321  00000 0 0011334677764      344454 8999


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC-----CCCCc
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~-----~~~~~  166 (328)
                      +|||||+.....    .......+.|+.++.+++++|++  .+++++||+||.++  ||.... +.+|+.     .+.+.
T Consensus        80 ~Vih~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~~SS~~v--~g~~~~-~~~e~~~~~~~~~~~~  150 (657)
T PRK07201         80 HVVHLAAIYDLT----ADEEAQRAANVDGTRNVVELAER--LQAATFHHVSSIAV--AGDYEG-VFREDDFDEGQGLPTP  150 (657)
T ss_pred             EEEECceeecCC----CCHHHHHHHHhHHHHHHHHHHHh--cCCCeEEEEecccc--ccCccC-ccccccchhhcCCCCc
Confidence            999999964221    23456778999999999999999  67899999999998  885433 333432     12344


Q ss_pred             h-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch-h------hhHHHHHHHcCC----CC-CCCCcccccccHHH
Q 020254          167 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-A------KMIPLFMMFAGG----PL-GSGQQWFSWIHLDD  233 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~------~~~~~~~~~~~~----~~-~~~~~~~~~i~v~D  233 (328)
                      | .+|...|....  . ..+++++++||+.|||+..... .      .+...+......    ++ +.+....+++|++|
T Consensus       151 Y~~sK~~~E~~~~--~-~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdd  227 (657)
T PRK07201        151 YHRTKFEAEKLVR--E-ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDY  227 (657)
T ss_pred             hHHHHHHHHHHHH--H-cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHH
Confidence            6 56655555443  2 2589999999999999864211 0      111222211111    11 34456789999999


Q ss_pred             HHHHHHHHhhCCCC-CceEEecCCCccCHHHHHHHHHHHhCCCC----CCCCcHHHHH
Q 020254          234 IVNLIYEALSNPSY-RGVINGTAPNPVRLAEMCDHLGNVLGRPS----WLPVPEFALK  286 (328)
Q Consensus       234 ~a~~~~~~~~~~~~-~g~~~i~~~~~~~~~e~~~~i~~~~g~~~----~~~~p~~~~~  286 (328)
                      +++++..++..+.. +++||+++++++++.|+++.+.+.+|.+.    ...+|.+...
T Consensus       228 va~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~  285 (657)
T PRK07201        228 VADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAA  285 (657)
T ss_pred             HHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHH
Confidence            99999999876543 45999999999999999999999999875    2356665443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=4.6e-28  Score=193.65  Aligned_cols=302  Identities=16%  Similarity=0.128  Sum_probs=221.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc----cCCCC--Cc--cccCceeecCChhhHhhcC--CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGK--KT--RFFPGVMIAEEPQWRDCIQ--GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~--~~--~~~~~~d~~~~~~~~~~~~--~~d   91 (328)
                      ++++.||||-||+-|++|++.|++.||.|+++.|+.+....    +...+  ..  ..+...|++|...+..+++  +||
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            35789999999999999999999999999999998543211    11111  11  1133468889999988886  799


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC--CCCch-H
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-L  168 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--~~~~y-~  168 (328)
                      .|+|+|+.+ .+..+-+.|....+++..|+.+++|+++-......+|...||+..  ||.....|.+|.+|  |.++| .
T Consensus        81 EIYNLaAQS-~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~--fG~v~~~pq~E~TPFyPrSPYAv  157 (345)
T COG1089          81 EIYNLAAQS-HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSPYAV  157 (345)
T ss_pred             hheeccccc-cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHh--hcCcccCccccCCCCCCCCHHHH
Confidence            999999975 345556677888899999999999999985322467888999988  99998999999999  56688 8


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc--ch-hhhHHHH-HHHcCCC----CCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--AL-AKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~-~~~~~~~-~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|....+....+...+|+-.+.=+..+--+|..+  .. +++.... ++..|..    +++-+..++|=|..|-++++..
T Consensus       158 AKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwl  237 (345)
T COG1089         158 AKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWL  237 (345)
T ss_pred             HHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHH
Confidence            9999999999888888988886665555555432  11 2333222 3334432    4888999999999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhcCc---------ceeeecCcccCchHHH
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLGEG---------AFVVLEGQRVVPARAK  308 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~---~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~  308 (328)
                      +++++. ...|.|++|+..|++||++...+..|.+..+.   +.+.-.++..|..         ++-..+.-.-+++|++
T Consensus       238 mLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~  316 (345)
T COG1089         238 MLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAK  316 (345)
T ss_pred             HHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHH
Confidence            999876 67999999999999999999999999652110   0111111111110         0011122233467785


Q ss_pred             -HCCCCcccccHHHHHHHhhC
Q 020254          309 -ELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       309 -~lG~~p~~~~~~~~l~~~l~  328 (328)
                       +|||+|+++ +++.++.|++
T Consensus       317 ~~LGW~~~~~-~~elv~~Mv~  336 (345)
T COG1089         317 EKLGWRPEVS-LEELVREMVE  336 (345)
T ss_pred             HHcCCccccC-HHHHHHHHHH
Confidence             799999996 9999999873

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=4e-28  Score=220.31  Aligned_cols=245  Identities=18%  Similarity=0.164  Sum_probs=174.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCccccc-------CCC-------------C-----CccccC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELI-------FPG-------------K-----KTRFFP   73 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-------~~~-------------~-----~~~~~~   73 (328)
                      ..++|+|||||||||++|++.|++.+   .+|+++.|........       ...             .     ....+.
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            35789999999999999999999764   3789999976532111       000             0     001122


Q ss_pred             ceeec-------CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           74 GVMIA-------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        74 ~~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      ..|+.       +.+.++.+++++|+|||+|+....    ...+....+.|+.++.+++++|++. .+++++||+||+++
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~v  164 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF----DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYV  164 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC----cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEE
Confidence            34665       334466778899999999997532    1346778899999999999999873 36789999999998


Q ss_pred             eeecCCCc----ccccCC-------------------------------------------------CCCCCch-HHHHH
Q 020254          147 GYYGTSET----EVFDES-------------------------------------------------SPSGNDY-LAEVC  172 (328)
Q Consensus       147 ~~yg~~~~----~~~~e~-------------------------------------------------~~~~~~y-~~k~~  172 (328)
                        ||....    .++.+.                                                 ....+.| .+|..
T Consensus       165 --yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~  242 (491)
T PLN02996        165 --CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM  242 (491)
T ss_pred             --ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence              986431    111100                                                 0123457 88888


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHH-------H-HHHcCCC---CCCCCcccccccHHHHHHHHHHH
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-------F-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-------~-~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .|.....+.  .+++++++||++|+|+...+...++..       + ....|..   ++++++.++++||+|++++++.+
T Consensus       243 aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a  320 (491)
T PLN02996        243 GEMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA  320 (491)
T ss_pred             HHHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence            887776553  489999999999999876544333321       1 1233333   37889999999999999999999


Q ss_pred             hhCC----CCCceEEecCC--CccCHHHHHHHHHHHhCCC
Q 020254          242 LSNP----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       242 ~~~~----~~~g~~~i~~~--~~~~~~e~~~~i~~~~g~~  275 (328)
                      +...    ....+||++++  .++++.|+++.+.+.++..
T Consensus       321 ~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        321 MAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             HHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            8753    12459999998  8899999999999988754

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=4.4e-28  Score=214.77  Aligned_cols=236  Identities=22%  Similarity=0.249  Sum_probs=172.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc------cCCCCCccccCceeecCChhhHhhcC----CC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQ----GS   90 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~----~~   90 (328)
                      ..+|+|+||||||+||+++++.|+++|++|++++|+..+...      .........+..+|+.|++.+.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            456799999999999999999999999999999998754321      00000111245689999999999887    59


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      |+||||++.....      ..+..++|+.++.++++++++  .++++||++||.++  |++            ...| ..
T Consensus       138 D~Vi~~aa~~~~~------~~~~~~vn~~~~~~ll~aa~~--~gv~r~V~iSS~~v--~~p------------~~~~~~s  195 (390)
T PLN02657        138 DVVVSCLASRTGG------VKDSWKIDYQATKNSLDAGRE--VGAKHFVLLSAICV--QKP------------LLEFQRA  195 (390)
T ss_pred             cEEEECCccCCCC------CccchhhHHHHHHHHHHHHHH--cCCCEEEEEeeccc--cCc------------chHHHHH
Confidence            9999998753111      123456889999999999998  78899999999876  531            1224 55


Q ss_pred             HHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC---CCCCccc-ccccHHHHHHHHHHHhhCC
Q 020254          170 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWF-SWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       170 k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~i~v~D~a~~~~~~~~~~  245 (328)
                      |.+.|.+...  ...+++++++||+.+||+..    ..+.  ....+.++   ++++..+ ++||++|+|++++.++.++
T Consensus       196 K~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~----~~~~--~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~  267 (390)
T PLN02657        196 KLKFEAELQA--LDSDFTYSIVRPTAFFKSLG----GQVE--IVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE  267 (390)
T ss_pred             HHHHHHHHHh--ccCCCCEEEEccHHHhcccH----HHHH--hhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc
Confidence            6555554432  34689999999999997532    1111  22234443   5555444 6799999999999999765


Q ss_pred             C-CCceEEecCC-CccCHHHHHHHHHHHhCCC-CCCCCcHHHHH
Q 020254          246 S-YRGVINGTAP-NPVRLAEMCDHLGNVLGRP-SWLPVPEFALK  286 (328)
Q Consensus       246 ~-~~g~~~i~~~-~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~  286 (328)
                      . .+++||++++ +.+|++|+++.+.+.+|++ ....+|.+...
T Consensus       268 ~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~  311 (390)
T PLN02657        268 SKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD  311 (390)
T ss_pred             cccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence            4 4569999986 6899999999999999987 34567777655

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=3.4e-26  Score=202.92  Aligned_cols=252  Identities=19%  Similarity=0.222  Sum_probs=172.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCccc---ccC--------CCC----CccccCceeecCC------h
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE---LIF--------PGK----KTRFFPGVMIAEE------P   81 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~~~--------~~~----~~~~~~~~d~~~~------~   81 (328)
                      +|+|||||||||++|++.|+++|  ++|++++|+.....   .+.        ...    ........|+.++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999876321   100        000    0011223465543      3


Q ss_pred             hhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           82 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        82 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      .+..+..++|+|||+|+....    ........+.|+.++.++++++.+  .+.++++++||.++  |+.....+..++.
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~----~~~~~~~~~~nv~g~~~ll~~a~~--~~~~~~v~iSS~~v--~~~~~~~~~~~~~  152 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW----VYPYSELRAANVLGTREVLRLAAS--GRAKPLHYVSTISV--LAAIDLSTVTEDD  152 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc----CCcHHHHhhhhhHHHHHHHHHHhh--CCCceEEEEccccc--cCCcCCCCccccc
Confidence            556667789999999986421    123467778999999999999998  67788999999998  7754322222222


Q ss_pred             C-------CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc-c--hhhhHHH-HHH-HcCCCCCCCC-cccc
Q 020254          162 P-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-A--LAKMIPL-FMM-FAGGPLGSGQ-QWFS  227 (328)
Q Consensus       162 ~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~--~~~~~~~-~~~-~~~~~~~~~~-~~~~  227 (328)
                      +       ....| .+|...|........ .|++++++||+.++|+... .  ...++.. +.. .......... ...+
T Consensus       153 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  231 (367)
T TIGR01746       153 AIVTPPPGLAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTED  231 (367)
T ss_pred             cccccccccCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccC
Confidence            2       12356 677777766655443 3899999999999997321 1  1122221 111 1111222222 3678


Q ss_pred             cccHHHHHHHHHHHhhCCCC---CceEEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHH
Q 020254          228 WIHLDDIVNLIYEALSNPSY---RGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALK  286 (328)
Q Consensus       228 ~i~v~D~a~~~~~~~~~~~~---~g~~~i~~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~  286 (328)
                      ++|++|++++++.++..+..   +++||+++++++++.|+++.+.+ .|.+ ..++.+.|...
T Consensus       232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~  293 (367)
T TIGR01746       232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQR  293 (367)
T ss_pred             cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHH
Confidence            99999999999999877653   56999999999999999999999 8876 34556666543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.95  E-value=9.7e-28  Score=198.07  Aligned_cols=231  Identities=19%  Similarity=0.199  Sum_probs=171.1

Q ss_pred             EEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCC----c--cc----cCceeecCChhhHhhcC--CCcE
Q 020254           26 VSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKK----T--RF----FPGVMIAEEPQWRDCIQ--GSTA   92 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~----~--~~----~~~~d~~~~~~~~~~~~--~~d~   92 (328)
                      ||||||+|.||+.|+++|++.+ .+|++++|++.....+.....    .  ..    ..-.|+.|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 689999999876544432210    0  00    11348889999999998  8999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      |||+|+.- ..+..+.++.+..+.|+.|+++++++|.+  .+++++|++||.-.              ..|.+.| .+|.
T Consensus        81 VfHaAA~K-hVpl~E~~p~eav~tNv~GT~nv~~aa~~--~~v~~~v~ISTDKA--------------v~PtnvmGatKr  143 (293)
T PF02719_consen   81 VFHAAALK-HVPLMEDNPFEAVKTNVLGTQNVAEAAIE--HGVERFVFISTDKA--------------VNPTNVMGATKR  143 (293)
T ss_dssp             EEE-------HHHHCCCHHHHHHHHCHHHHHHHHHHHH--TT-SEEEEEEECGC--------------SS--SHHHHHHH
T ss_pred             EEEChhcC-CCChHHhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEcccccc--------------CCCCcHHHHHHH
Confidence            99999974 44556678899999999999999999999  89999999999754              2345667 8898


Q ss_pred             HHHHHHHHhcccC---CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC--CCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          172 CREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       172 ~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      ..|.....++...   +..++++|+|+|.|..++....|..  +...|+|+  .+++..|-++.++++++.++.+.....
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~--Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~  221 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKK--QIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK  221 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHH--HHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHH--HHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC
Confidence            8888888887765   6799999999999998644333333  45567786  788999999999999999999998766


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCC
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~  275 (328)
                      .+++|.+--|+++++.|+++.+.+..|.+
T Consensus       222 ~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  222 GGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             CCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            56699999899999999999999999854

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=6.2e-26  Score=194.16  Aligned_cols=255  Identities=21%  Similarity=0.197  Sum_probs=171.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc------CC-CcEEEECC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QG-STAVVNLA   97 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~-~d~vi~~a   97 (328)
                      +|+||||||++|++++++|+++|++|++++|++.+....  ..   ....+|+.|++.+.+++      ++ +|.|+|++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~--~~---~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~   75 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGP--NE---KHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA   75 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCC--CC---ccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence            499999999999999999999999999999998754321  11   14457999999999988      57 99999998


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEG  177 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~  177 (328)
                      +...     .         ......++++++++  .++++||++||..+  +...         +      .+...+.  
T Consensus        76 ~~~~-----~---------~~~~~~~~i~aa~~--~gv~~~V~~Ss~~~--~~~~---------~------~~~~~~~--  120 (285)
T TIGR03649        76 PPIP-----D---------LAPPMIKFIDFARS--KGVRRFVLLSASII--EKGG---------P------AMGQVHA--  120 (285)
T ss_pred             CCCC-----C---------hhHHHHHHHHHHHH--cCCCEEEEeecccc--CCCC---------c------hHHHHHH--
Confidence            6421     0         02344688999999  79999999998665  2110         0      0111111  


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC--CCCCcccccccHHHHHHHHHHHhhCCC-CCceEEec
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGT  254 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~i~  254 (328)
                       .....++++++++||+.+++......  ...  .......+  ..++..+++|+++|+|+++..++..+. .++.|++.
T Consensus       121 -~l~~~~gi~~tilRp~~f~~~~~~~~--~~~--~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~  195 (285)
T TIGR03649       121 -HLDSLGGVEYTVLRPTWFMENFSEEF--HVE--AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVL  195 (285)
T ss_pred             -HHHhccCCCEEEEeccHHhhhhcccc--ccc--ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEee
Confidence             11111489999999998886531110  011  11111222  456778999999999999999998865 45699999


Q ss_pred             CCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHh---cCcce-----------e-eecCcccCchHHHHCCCCccccc
Q 020254          255 APNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVL---GEGAF-----------V-VLEGQRVVPARAKELGFPFKYRY  318 (328)
Q Consensus       255 ~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~~---~~~~~-----------~-~~~~~~~~~~~~~~lG~~p~~~~  318 (328)
                      +++.+|+.|+++.+.+.+|++ ....+|...+....   +....           . .......+.+-.+.+|.+|+  +
T Consensus       196 g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~  273 (285)
T TIGR03649       196 GPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPR--G  273 (285)
T ss_pred             CCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCc--c
Confidence            999999999999999999987 33345544332211   10000           0 00011122222355899999  8


Q ss_pred             HHHHHHHh
Q 020254          319 VKDALKAI  326 (328)
Q Consensus       319 ~~~~l~~~  326 (328)
                      |++.+++.
T Consensus       274 ~~~~~~~~  281 (285)
T TIGR03649       274 FRDFAESN  281 (285)
T ss_pred             HHHHHHHh
Confidence            99999875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.94  E-value=7.4e-26  Score=198.49  Aligned_cols=233  Identities=22%  Similarity=0.260  Sum_probs=193.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCC------ccccCceeecCChhhHhhcCC--Cc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKK------TRFFPGVMIAEEPQWRDCIQG--ST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~--~d   91 (328)
                      -..++||||||+|-||+.+++++++.+ .++++++|++.+.........      ...+.-.|+.|.+.++.++++  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            346899999999999999999999986 689999999887544322111      111334689999999999987  99


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      +|||+|+.- ..+..+.++.+....|+.||+|++++|.+  .+++++|++||.-.              ..|.+.| ..|
T Consensus       328 ~VfHAAA~K-HVPl~E~nP~Eai~tNV~GT~nv~~aa~~--~~V~~~V~iSTDKA--------------V~PtNvmGaTK  390 (588)
T COG1086         328 IVFHAAALK-HVPLVEYNPEEAIKTNVLGTENVAEAAIK--NGVKKFVLISTDKA--------------VNPTNVMGATK  390 (588)
T ss_pred             eEEEhhhhc-cCcchhcCHHHHHHHhhHhHHHHHHHHHH--hCCCEEEEEecCcc--------------cCCchHhhHHH
Confidence            999999974 56778889999999999999999999999  89999999999654              2345667 888


Q ss_pred             HHHHHHHHHhcccC---CCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC--CCCCcccccccHHHHHHHHHHHhh
Q 020254          171 VCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       171 ~~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      ...|.....++.+.   +..++++|+|||.|..++    .+|.+  ++.+|+|+  .+++..|-|..+.|+++.++.+..
T Consensus       391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS----ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a  466 (588)
T COG1086         391 RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS----VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGA  466 (588)
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC----CHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHh
Confidence            88888887776633   378999999999999864    55555  55677775  889999999999999999999998


Q ss_pred             CCCCCceEEecCCCccCHHHHHHHHHHHhCC
Q 020254          244 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGR  274 (328)
Q Consensus       244 ~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~  274 (328)
                      ....+++|-+--|++++..|+++.+.+..|.
T Consensus       467 ~~~gGeifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         467 IAKGGEIFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             hcCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            8765569999999999999999999999983

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.94  E-value=2.8e-25  Score=210.93  Aligned_cols=265  Identities=16%  Similarity=0.162  Sum_probs=181.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   98 (328)
                      .+.||||||||+||||++|++.|.++|++|...                    ..|+.|.+.+...+.  ++|+|||||+
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa  437 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------KGRLEDRSSLLADIRNVKPTHVFNAAG  437 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------ccccccHHHHHHHHHhhCCCEEEECCc
Confidence            346899999999999999999999999988311                    024567777777765  7999999999


Q ss_pred             CCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC------CcccccCCCCCC---Cch
Q 020254           99 TPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS------ETEVFDESSPSG---NDY  167 (328)
Q Consensus        99 ~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~------~~~~~~e~~~~~---~~y  167 (328)
                      ....  .++++..+...+++|+.++.+++++|++  .+++ ++++||+++  |+..      ...+++|++++.   +.|
T Consensus       438 ~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~--~g~~-~v~~Ss~~v--~~~~~~~~~~~~~p~~E~~~~~~~~~~Y  512 (668)
T PLN02260        438 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRE--NGLL-MMNFATGCI--FEYDAKHPEGSGIGFKEEDKPNFTGSFY  512 (668)
T ss_pred             ccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHH--cCCe-EEEEcccce--ecCCcccccccCCCCCcCCCCCCCCChh
Confidence            7642  3355667889999999999999999999  6774 778888888  6531      123677765432   456


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                       .+|...|.....+     .++.++|+.++|+.+.....+++..+... ..++.-   ..+..+++|++.+++.++... 
T Consensus       513 g~sK~~~E~~~~~~-----~~~~~~r~~~~~~~~~~~~~nfv~~~~~~-~~~~~v---p~~~~~~~~~~~~~~~l~~~~-  582 (668)
T PLN02260        513 SKTKAMVEELLREY-----DNVCTLRVRMPISSDLSNPRNFITKISRY-NKVVNI---PNSMTVLDELLPISIEMAKRN-  582 (668)
T ss_pred             hHHHHHHHHHHHhh-----hhheEEEEEEecccCCCCccHHHHHHhcc-ceeecc---CCCceehhhHHHHHHHHHHhC-
Confidence             6676666665443     25788899999975422222444333211 112211   235788899999988888753 


Q ss_pred             CCceEEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHH
Q 020254          247 YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALK  324 (328)
Q Consensus       247 ~~g~~~i~~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~  324 (328)
                      .+|+||++++..+|++|+++.+.+.++.. ...+++..........  . .... .++++|+++ +|+ +.  +|+++|+
T Consensus       583 ~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a--~-rp~~-~l~~~k~~~~~~~-~~--~~~~~l~  655 (668)
T PLN02260        583 LRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVA--P-RSNN-EMDASKLKKEFPE-LL--SIKESLI  655 (668)
T ss_pred             CCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhC--C-Cccc-cccHHHHHHhCcc-cc--chHHHHH
Confidence            36899999999999999999999987421 1223332222210011  1 1122 688888876 687 65  6999999


Q ss_pred             Hhh
Q 020254          325 AIM  327 (328)
Q Consensus       325 ~~l  327 (328)
                      +++
T Consensus       656 ~~~  658 (668)
T PLN02260        656 KYV  658 (668)
T ss_pred             HHH
Confidence            876

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=1.1e-24  Score=201.40  Aligned_cols=201  Identities=21%  Similarity=0.249  Sum_probs=143.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      ||||||||+||||++|++.|+++||+|++++|.+.....  ...   .+...|+.++. +.+++.++|+|||+|+.... 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~~--~~v---e~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~-   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALD--PRV---DYVCASLRNPV-LQELAGEADAVIHLAPVDTS-   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhccc--CCc---eEEEccCCCHH-HHHHhcCCCEEEEcCccCcc-
Confidence            589999999999999999999999999999987543211  111   14456887774 77888899999999986311 


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhccc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  183 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  183 (328)
                          .    ....|+.++.+++++|++  .++ ++||+||.    ||...            .|.   ..|...    ..
T Consensus        74 ----~----~~~vNv~Gt~nLleAA~~--~Gv-RiV~~SS~----~G~~~------------~~~---~aE~ll----~~  119 (699)
T PRK12320         74 ----A----PGGVGITGLAHVANAAAR--AGA-RLLFVSQA----AGRPE------------LYR---QAETLV----ST  119 (699)
T ss_pred             ----c----hhhHHHHHHHHHHHHHHH--cCC-eEEEEECC----CCCCc------------ccc---HHHHHH----Hh
Confidence                1    124799999999999998  566 69999875    34211            010   122221    12


Q ss_pred             CCCeEEEEEeceEEcCCCcc-hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHH
Q 020254          184 KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  262 (328)
Q Consensus       184 ~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~  262 (328)
                      ++++++++|++++||++... ..+++..+...   ..  ......+||++|++++++.+++.+. .|+|||++++.+|+.
T Consensus       120 ~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~---~~--~~~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~  193 (699)
T PRK12320        120 GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRS---KV--SARPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVV  193 (699)
T ss_pred             cCCCEEEEeCceecCCCCcccHhHHHHHHHHH---HH--cCCceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHH
Confidence            46899999999999996432 12333322110   01  1233446999999999999998643 579999999999999


Q ss_pred             HHHHHHHHH
Q 020254          263 EMCDHLGNV  271 (328)
Q Consensus       263 e~~~~i~~~  271 (328)
                      |+++.+...
T Consensus       194 el~~~i~~~  202 (699)
T PRK12320        194 TAWRLLRSV  202 (699)
T ss_pred             HHHHHHHHh
Confidence            998888766

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.91  E-value=9e-24  Score=177.25  Aligned_cols=227  Identities=19%  Similarity=0.187  Sum_probs=148.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhc-CCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-QGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~-~~~d~vi~~a~~   99 (328)
                      .+|+|+||||||+||++++++|+++||+|++++|++.+............+...|+.|. +.+.+.+ .++|+||++++.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            36799999999999999999999999999999998765433222111112445788873 6677777 689999999885


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch--HHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY--LAEVCREWEG  177 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y--~~k~~~~~~~  177 (328)
                      ....  .   +....+.|..++.++++++.+  .+++++|++||.++  ||.....+..+.......+  ....+.+.+.
T Consensus        96 ~~~~--~---~~~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v--~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~  166 (251)
T PLN00141         96 RRSF--D---PFAPWKVDNFGTVNLVEACRK--AGVTRFILVSSILV--NGAAMGQILNPAYIFLNLFGLTLVAKLQAEK  166 (251)
T ss_pred             CcCC--C---CCCceeeehHHHHHHHHHHHH--cCCCEEEEEccccc--cCCCcccccCcchhHHHHHHHHHHHHHHHHH
Confidence            3211  1   112246788899999999998  78899999999988  8754333222211111112  1111222222


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCC
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAP  256 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~  256 (328)
                      ..  ...+++++++||+++++.....  ...     ...    .......+|+.+|+|+++..++..+.. ..++.+.+.
T Consensus       167 ~l--~~~gi~~~iirpg~~~~~~~~~--~~~-----~~~----~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~  233 (251)
T PLN00141        167 YI--RKSGINYTIVRPGGLTNDPPTG--NIV-----MEP----EDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVAR  233 (251)
T ss_pred             HH--HhcCCcEEEEECCCccCCCCCc--eEE-----ECC----CCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecC
Confidence            11  2358999999999999864210  000     000    111123479999999999999988764 447777762


Q ss_pred             ---CccCHHHHHHHHHH
Q 020254          257 ---NPVRLAEMCDHLGN  270 (328)
Q Consensus       257 ---~~~~~~e~~~~i~~  270 (328)
                         ...++.++...+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        234 ADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             CCCCchhHHHHHHHhhc
Confidence               23688888877654

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.91  E-value=2.6e-23  Score=190.23  Aligned_cols=243  Identities=15%  Similarity=0.184  Sum_probs=165.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCccc-------ccCC----------C--------CCccccCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAE-------LIFP----------G--------KKTRFFPG   74 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------~~~~----------~--------~~~~~~~~   74 (328)
                      .++|||||||||||++|++.|++.+.   +|+++.|......       ++..          .        ........
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~  198 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV  198 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence            57999999999999999999998653   7899999764321       1100          0        00111234


Q ss_pred             eeecCC------hhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccccee
Q 020254           75 VMIAEE------PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGY  148 (328)
Q Consensus        75 ~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~  148 (328)
                      .|+.++      +..+.+.+++|+|||+|+....    ..+++...++|+.++.+++++|++. ...+++||+||+.+  
T Consensus       199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f----~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayV--  271 (605)
T PLN02503        199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTTF----DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYV--  271 (605)
T ss_pred             eeCCCcccCCCHHHHHHHHhcCCEEEECcccccc----ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCcee--
Confidence            677776      3555666789999999997532    2346778899999999999999873 24678999999998  


Q ss_pred             ecCCCcc----ccc--C--------------------------------C----------------------CCCCCch-
Q 020254          149 YGTSETE----VFD--E--------------------------------S----------------------SPSGNDY-  167 (328)
Q Consensus       149 yg~~~~~----~~~--e--------------------------------~----------------------~~~~~~y-  167 (328)
                      ||...+.    ++.  +                                .                      ..-++.| 
T Consensus       272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt  351 (605)
T PLN02503        272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV  351 (605)
T ss_pred             ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence            8865321    221  0                                0                      0012456 


Q ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhh-------hHHHH-HHHcCC---CCCCCCcccccccHHHHHH
Q 020254          168 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-------MIPLF-MMFAGG---PLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-------~~~~~-~~~~~~---~~~~~~~~~~~i~v~D~a~  236 (328)
                      ..|...|......  ..+++++|+||+.|.+.-..++..       ..+.. ....|.   .+++++...++|+||.++.
T Consensus       352 ~TK~lAE~lV~~~--~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn  429 (605)
T PLN02503        352 FTKAMGEMVINSM--RGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN  429 (605)
T ss_pred             HHHHHHHHHHHHh--cCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence            6776666666533  358999999999995422111111       11111 111222   1378889999999999999


Q ss_pred             HHHHHhhC-C----CCCceEEecCC--CccCHHHHHHHHHHHhCC
Q 020254          237 LIYEALSN-P----SYRGVINGTAP--NPVRLAEMCDHLGNVLGR  274 (328)
Q Consensus       237 ~~~~~~~~-~----~~~g~~~i~~~--~~~~~~e~~~~i~~~~g~  274 (328)
                      +++.+... .    ....+||++++  +|++++++.+.+.+.+..
T Consensus       430 a~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        430 ATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            99998432 1    12459999988  899999999999987764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.91  E-value=1.2e-23  Score=168.03  Aligned_cols=183  Identities=28%  Similarity=0.434  Sum_probs=134.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRW  105 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~  105 (328)
                      |+|+||||++|+.++++|+++||+|++++|++.+... ....   .....|+.|++.+.++++++|+||++++....   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~---~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~---   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGV---EIIQGDLFDPDSVKAALKGADAVIHAAGPPPK---   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTE---EEEESCTTCHHHHHHHHTTSSEEEECCHSTTT---
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-cccc---ccceeeehhhhhhhhhhhhcchhhhhhhhhcc---
Confidence            7999999999999999999999999999999887665 2211   14567899999999999999999999975311   


Q ss_pred             ChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhcccCC
Q 020254          106 SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD  185 (328)
Q Consensus       106 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~~~  185 (328)
                                 +...++++++++++  .++++++++|+.++  |+...........+....|. ..+.+.+....  .++
T Consensus        74 -----------~~~~~~~~~~a~~~--~~~~~~v~~s~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~--~~~  135 (183)
T PF13460_consen   74 -----------DVDAAKNIIEAAKK--AGVKRVVYLSSAGV--YRDPPGLFSDEDKPIFPEYA-RDKREAEEALR--ESG  135 (183)
T ss_dssp             -----------HHHHHHHHHHHHHH--TTSSEEEEEEETTG--TTTCTSEEEGGTCGGGHHHH-HHHHHHHHHHH--HST
T ss_pred             -----------cccccccccccccc--cccccceeeecccc--CCCCCcccccccccchhhhH-HHHHHHHHHHH--hcC
Confidence                       16778899999999  78999999999998  87555433333333223342 22223333222  359


Q ss_pred             CeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          186 VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       186 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      ++|+++||+.+||+..... .+..          .......++|+++|+|++++.++++
T Consensus       136 ~~~~ivrp~~~~~~~~~~~-~~~~----------~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  136 LNWTIVRPGWIYGNPSRSY-RLIK----------EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             SEEEEEEESEEEBTTSSSE-EEES----------STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCEEEEECcEeEeCCCcce-eEEe----------ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999999999974311 1111          0334456899999999999998864

...

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.90  E-value=4.4e-23  Score=165.16  Aligned_cols=242  Identities=20%  Similarity=0.270  Sum_probs=181.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cccC--CCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF--PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..-+.|+|||||+|++++++|.+.|-+|++--|..+.. .++.  ....+..+...|+.|+++++++++...+|||+.|-
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr  140 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR  140 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence            34688999999999999999999999999998876543 2222  23333445678999999999999999999999985


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  178 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  178 (328)
                      .    +... .-.+.++|+.+++.|+..|++  .++.++|++|+.+..             ....+.| .+|...|....
T Consensus       141 d----~eTk-nf~f~Dvn~~~aerlAricke--~GVerfIhvS~Lgan-------------v~s~Sr~LrsK~~gE~aVr  200 (391)
T KOG2865|consen  141 D----YETK-NFSFEDVNVHIAERLARICKE--AGVERFIHVSCLGAN-------------VKSPSRMLRSKAAGEEAVR  200 (391)
T ss_pred             c----cccC-CcccccccchHHHHHHHHHHh--hChhheeehhhcccc-------------ccChHHHHHhhhhhHHHHH
Confidence            2    2221 235668999999999999999  899999999986641             0111233 44444433332


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC--CCCCcccccccHHHHHHHHHHHhhCCCCCc-eEEecC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTA  255 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~~i~~  255 (328)
                        .  .-...+|+||+.|||..+..++.+...++...-.|+  ....+...++||-|+|.+++.+.+++...| +|...+
T Consensus       201 --d--afPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vG  276 (391)
T KOG2865|consen  201 --D--AFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVG  276 (391)
T ss_pred             --h--hCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecC
Confidence              2  134689999999999998777776666655555555  233567789999999999999999998666 999999


Q ss_pred             CCccCHHHHHHHHHHHhCCC---CCCCCcHHHHHHH
Q 020254          256 PNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKAV  288 (328)
Q Consensus       256 ~~~~~~~e~~~~i~~~~g~~---~~~~~p~~~~~~~  288 (328)
                      ++...+.|+++.+-+....-   ..+++|.+.....
T Consensus       277 P~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~  312 (391)
T KOG2865|consen  277 PDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAA  312 (391)
T ss_pred             CchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHh
Confidence            99999999999998887653   2345565554443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.6e-22  Score=169.51  Aligned_cols=234  Identities=14%  Similarity=0.064  Sum_probs=161.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      .|+||||||+|+||++++++|+++|++|++++|++.....+... .....+..+|+.|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999987554332211 1111244689999888776653       589999


Q ss_pred             ECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||.....   .+..+..+..++.|+.++.++++++...  ..+.+++|++||.+.  ...         .|....| .
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~  150 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGG--QIA---------YPGFSLYHA  150 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccc--ccC---------CCCCchhHH
Confidence            999975332   2334566788899999999999997321  146678999999654  221         2334567 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceE---EcCCCcch------h-hhHHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIV---LGKDGGAL------A-KMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v---~g~~~~~~------~-~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      +|...+.....+..+   .+++++++|||.+   ||++....      . .....+ ......+      ...+.+++|+
T Consensus       151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~  224 (276)
T PRK06482        151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS------FAIPGDPQKM  224 (276)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc------CCCCCCHHHH
Confidence            787777666555433   5899999999988   55432110      0 001111 1111111      1124689999


Q ss_pred             HHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhC
Q 020254          235 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  273 (328)
Q Consensus       235 a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g  273 (328)
                      +++++.++..+.....||+++++..+..|++..+.+.++
T Consensus       225 ~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        225 VQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             HHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            999999998765556899999988888888888877664

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.88  E-value=5.4e-23  Score=172.03  Aligned_cols=203  Identities=17%  Similarity=0.233  Sum_probs=113.9

Q ss_pred             EEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcc---ccc----CCC----------CCccccCceeecCC------hh
Q 020254           28 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKA---ELI----FPG----------KKTRFFPGVMIAEE------PQ   82 (328)
Q Consensus        28 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~~----~~~----------~~~~~~~~~d~~~~------~~   82 (328)
                      |||||||+|++|+++|++++.  +|+++.|..+..   .++    ...          .........|+.++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  999999987541   111    000          11111233566643      45


Q ss_pred             hHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccc------
Q 020254           83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV------  156 (328)
Q Consensus        83 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~------  156 (328)
                      +..+.+++|+|||||+.....   . +..+.++.|+.+++++++.|..  ...++|+|+||+.+  .+......      
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~---~-~~~~~~~~NV~gt~~ll~la~~--~~~~~~~~iSTa~v--~~~~~~~~~~~~~~  152 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN---A-PYSELRAVNVDGTRNLLRLAAQ--GKRKRFHYISTAYV--AGSRPGTIEEKVYP  152 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-----S--EEHHHHHHHHHHHHHHHTS--SS---EEEEEEGGG--TTS-TTT--SSS-H
T ss_pred             hhccccccceeeecchhhhhc---c-cchhhhhhHHHHHHHHHHHHHh--ccCcceEEeccccc--cCCCCCcccccccc
Confidence            666677899999999975322   2 3455788999999999999997  56669999999655  44332211      


Q ss_pred             -----ccCCCCCCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCC-Ccch--hh-hHHHH--HHHcCC-C--CCC
Q 020254          157 -----FDESSPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKD-GGAL--AK-MIPLF--MMFAGG-P--LGS  221 (328)
Q Consensus       157 -----~~e~~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~-~~~~--~~-~~~~~--~~~~~~-~--~~~  221 (328)
                           .+......+.| .+|+..|........+.|++++|+|||.|+|.. .+..  .. +...+  ....+. |  .+.
T Consensus       153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  232 (249)
T PF07993_consen  153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD  232 (249)
T ss_dssp             HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred             cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence                 11111234567 888888888887776669999999999999943 2211  12 12112  111122 2  244


Q ss_pred             CCcccccccHHHHHHHH
Q 020254          222 GQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       222 ~~~~~~~i~v~D~a~~~  238 (328)
                      .+...++++||.+|+++
T Consensus       233 ~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  233 PDARLDLVPVDYVARAI  249 (249)
T ss_dssp             --TT--EEEHHHHHHHH
T ss_pred             CCceEeEECHHHHHhhC
Confidence            55679999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.87  E-value=1.1e-20  Score=193.68  Aligned_cols=254  Identities=17%  Similarity=0.188  Sum_probs=172.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC----CeEEEEecCCCcccccCC--------------CCCccccCceeecC----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFP--------------GKKTRFFPGVMIAE----   79 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~--------------~~~~~~~~~~d~~~----   79 (328)
                      ..++|+|||||||+|+++++.|++++    ++|+++.|..........              ......+...|+.+    
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999876    899999997543221100              00001123345543    


Q ss_pred             --ChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC----
Q 020254           80 --EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----  153 (328)
Q Consensus        80 --~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~----  153 (328)
                        .+.+.++..++|+|||+|+....   . .........|+.++.++++++.+  .+.++++|+||.++  |+...    
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~-~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~vSS~~v--~~~~~~~~~ 1121 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHW---V-YPYSKLRDANVIGTINVLNLCAE--GKAKQFSFVSSTSA--LDTEYYVNL 1121 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecC---c-cCHHHHHHhHHHHHHHHHHHHHh--CCCceEEEEeCeee--cCcccccch
Confidence              34566667789999999997521   1 22345567899999999999998  67889999999988  76321    


Q ss_pred             --------cccccCCCC-------CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH-HH
Q 020254          154 --------TEVFDESSP-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-MM  213 (328)
Q Consensus       154 --------~~~~~e~~~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~-~~  213 (328)
                              ...+.|..+       +.+.| .+|+..|.....+.. .|++++++||+.|||+....   ...++..+ ..
T Consensus      1122 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~ 1200 (1389)
T TIGR03443      1122 SDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKG 1200 (1389)
T ss_pred             hhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHH
Confidence                    111222221       12347 788888877766554 48999999999999986422   12223222 11


Q ss_pred             H-cCCCCCCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHH
Q 020254          214 F-AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFAL  285 (328)
Q Consensus       214 ~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~  285 (328)
                      . .-.........+++++++|++++++.++..+.   ...+||++++..+++.++++.+.+. |.+ ..++.+.|..
T Consensus      1201 ~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~w~~ 1276 (1389)
T TIGR03443      1201 CIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVDYVHWRK 1276 (1389)
T ss_pred             HHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccCHHHHHH
Confidence            1 11222344556899999999999999987653   2238999999899999999999764 554 3345555544

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.87  E-value=3.4e-21  Score=173.28  Aligned_cols=230  Identities=16%  Similarity=0.094  Sum_probs=149.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---------C----CccccCceeecCChhhHhhc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------K----KTRFFPGVMIAEEPQWRDCI   87 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~----~~~~~~~~d~~~~~~~~~~~   87 (328)
                      .+.++||||||+|+||++++++|++.|++|++++|+..+...+...         +    ....+..+|+.|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            3557899999999999999999999999999999987654332110         0    01124567999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           88 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        88 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      .++|+|||++|....   ...+....+++|+.++.++++++.+  .++++||++||.++...+.. ...    ......|
T Consensus       158 ggiDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~--agVgRIV~VSSiga~~~g~p-~~~----~~sk~~~  227 (576)
T PLN03209        158 GNASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATV--AKVNHFILVTSLGTNKVGFP-AAI----LNLFWGV  227 (576)
T ss_pred             cCCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHH--hCCCEEEEEccchhcccCcc-ccc----hhhHHHH
Confidence            999999999986421   1123456678999999999999998  68899999999875111110 000    0001112


Q ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC-
Q 020254          168 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  246 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  246 (328)
                       ...+...+....  .+|++|++||||.+.++.+.....  ..+....+.     ......+..+|+|++++.++.++. 
T Consensus       228 -~~~KraaE~~L~--~sGIrvTIVRPG~L~tp~d~~~~t--~~v~~~~~d-----~~~gr~isreDVA~vVvfLasd~~a  297 (576)
T PLN03209        228 -LCWKRKAEEALI--ASGLPYTIVRPGGMERPTDAYKET--HNLTLSEED-----TLFGGQVSNLQVAELMACMAKNRRL  297 (576)
T ss_pred             -HHHHHHHHHHHH--HcCCCEEEEECCeecCCccccccc--cceeecccc-----ccCCCccCHHHHHHHHHHHHcCchh
Confidence             112222222222  369999999999999874321100  000000000     011125889999999999998654 


Q ss_pred             -CCceEEecCCCccCHHHHHHHHHH
Q 020254          247 -YRGVINGTAPNPVRLAEMCDHLGN  270 (328)
Q Consensus       247 -~~g~~~i~~~~~~~~~e~~~~i~~  270 (328)
                       ...+|.+.++.......+.+++.+
T Consensus       298 s~~kvvevi~~~~~p~~~~~~~~~~  322 (576)
T PLN03209        298 SYCKVVEVIAETTAPLTPMEELLAK  322 (576)
T ss_pred             ccceEEEEEeCCCCCCCCHHHHHHh
Confidence             344889888764444445444443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.6e-20  Score=157.46  Aligned_cols=221  Identities=18%  Similarity=0.058  Sum_probs=147.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .++|+||||||||+||++|+++|+++|++|+++.|+........     .......+..+|+.|.+.+.++++       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            34579999999999999999999999999988787765321110     111111244678988888776653       


Q ss_pred             CCcEEEECCCCCCCCC---CChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||++|......   ...+.....++.|+.++.++++.+.+.  ..+.+++|++||.+.  +...         +.
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~--~~~~---------~~  152 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAG--LPGW---------PG  152 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc--CCCC---------CC
Confidence            6799999999642222   245567888899999999998887421  146789999999876  4321         12


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....+..+   .+++++++|||.++++.......... .......+      ...+++++|+++++.
T Consensus       153 ~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~dva~~~~  225 (249)
T PRK12825        153 RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAR-EAKDAETP------LGRSGTPEDIARAVA  225 (249)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhH-HhhhccCC------CCCCcCHHHHHHHHH
Confidence            3446 6665555555443332   58999999999999986432111000 01000111      223899999999999


Q ss_pred             HHhhCCC---CCceEEecCCCcc
Q 020254          240 EALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      .++....   .+.+|+++++..+
T Consensus       226 ~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        226 FLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHhCccccCcCCCEEEeCCCEee
Confidence            9997643   3449999988643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.87  E-value=5.6e-21  Score=161.64  Aligned_cols=220  Identities=16%  Similarity=0.090  Sum_probs=145.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +++++|||||+|+||+++++.|+++|++|++++|++........    ......+..+|+.|.+.++++++       ++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998754332211    11111134578888888776654       48


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhh----HHHHHHHH-hcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLI-NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      |+|||+++.....   ....+..+..++.|+.+    +..+++++ ++  .+.+++|++||...  +..         .+
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~~~~iv~~ss~~~--~~~---------~~  152 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD--DRGGVVIYMGSVHS--HEA---------SP  152 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh--cCCcEEEEEcchhh--cCC---------CC
Confidence            9999999974321   23445667888899999    66667766 55  56789999999654  221         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcC--------CCCCCCCccccccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG--------GPLGSGQQWFSWIH  230 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~  230 (328)
                      ....| .+|...+.....+..+   .+++++++||+.++++....   .........+        ..+........+++
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK---QIPEQAKELGISEEEVVKKVMLGKTVDGVFTT  229 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh---hhHhhhhccCCChHHHHHHHHhcCCCCCCCCC
Confidence            23455 5665555444333322   48999999999999985211   1111000000        00112334567999


Q ss_pred             HHHHHHHHHHHhhCCC--C-CceEEecCCC
Q 020254          231 LDDIVNLIYEALSNPS--Y-RGVINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~--~-~g~~~i~~~~  257 (328)
                      ++|++++++.++..+.  . +..|++.++.
T Consensus       230 ~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        230 VEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             HHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            9999999999987643  2 3488887764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.86  E-value=3.7e-21  Score=151.12  Aligned_cols=298  Identities=17%  Similarity=0.168  Sum_probs=201.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-----ccCCC-----CCccccCceeecCChhhHhhcC--CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~   90 (328)
                      .+-.||||-||.=|++|++.|+..||+|.++.|+.+.-.     ++...     +......-.|++|...+.+++.  ++
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            456899999999999999999999999999999876422     22111     1111233368889999999886  79


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCC-CCCCcEEEEecccceeecCCCcccccCCCC--CCCch
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY  167 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--~~~~y  167 (328)
                      +-|+|+|+..+. ..+.+.++..-++...|+.+++++++.++ ...-+|...||+..  ||.....|..|.+|  |.++|
T Consensus       108 tEiYnLaAQSHV-kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEl--yGkv~e~PQsE~TPFyPRSPY  184 (376)
T KOG1372|consen  108 TEVYNLAAQSHV-KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSEL--YGKVQEIPQSETTPFYPRSPY  184 (376)
T ss_pred             hhhhhhhhhcce-EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhh--cccccCCCcccCCCCCCCChh
Confidence            999999997643 23334455666788889999999999852 23347888889888  99888889999998  45677


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEc---CCCc--ch-hhhHHHH-HHHcCCC----CCCCCcccccccHHHHH
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLG---KDGG--AL-AKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g---~~~~--~~-~~~~~~~-~~~~~~~----~~~~~~~~~~i~v~D~a  235 (328)
                       .+|....+....+...+++-.+   -|.+|.   |..+  .. .++.... ++..++.    +++-+..++|-|..|-+
T Consensus       185 a~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYV  261 (376)
T KOG1372|consen  185 AAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYV  261 (376)
T ss_pred             HHhhhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHH
Confidence             6676665555555544454433   344443   3221  22 1222222 3333332    47888999999999999


Q ss_pred             HHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcC--------c---ceeeecCcccCc
Q 020254          236 NLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGE--------G---AFVVLEGQRVVP  304 (328)
Q Consensus       236 ~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~--------~---~~~~~~~~~~~~  304 (328)
                      .++..++++.. ..-|.|+.++..|++||++..-..+|....+.=.........++        .   ++...+.-.-+.
T Consensus       262 EAMW~mLQ~d~-PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGda  340 (376)
T KOG1372|consen  262 EAMWLMLQQDS-PDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDA  340 (376)
T ss_pred             HHHHHHHhcCC-CCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCCh
Confidence            99999999875 56899999999999999999988888542111000000000000        0   011222334445


Q ss_pred             hHHH-HCCCCcccccHHHHHHHhhC
Q 020254          305 ARAK-ELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       305 ~~~~-~lG~~p~~~~~~~~l~~~l~  328 (328)
                      +|++ .|||+|+.. +.+-+++|++
T Consensus       341 sKAk~~LgW~pkv~-f~eLVkeMv~  364 (376)
T KOG1372|consen  341 SKAKKTLGWKPKVT-FPELVKEMVA  364 (376)
T ss_pred             HHHHHhhCCCCccC-HHHHHHHHHH
Confidence            7775 599999995 9999999863

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.86  E-value=3.3e-20  Score=155.87  Aligned_cols=221  Identities=18%  Similarity=0.077  Sum_probs=148.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+..+....    ........+..+|+.|.+++.++++       +
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3457899999999999999999999999999999986533221    1111111244578888888877664       6


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+++.....   ....+.+...++.|+.++.++++++...  ..+.+++|++||...  ++..        .+..
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~--~~~~--------~~~~  153 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG--PRVG--------YPGL  153 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHh--hccC--------CCCc
Confidence            89999999865331   3345667888999999999999887421  145678999999875  4111        1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+...   .+++++++||+.++|+..................++      ..+++++|+++++..
T Consensus       154 ~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  227 (251)
T PRK12826        154 AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            456 6665555554443322   489999999999999864322111000111112222      247999999999999


Q ss_pred             HhhCCC---CCceEEecCCC
Q 020254          241 ALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~  257 (328)
                      ++....   .+.+|++.+|.
T Consensus       228 l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HhCccccCcCCcEEEECCCc
Confidence            887643   24499998765

>PRK09135 pteridine reductase; Provisional

Probab=99.85  E-value=5.4e-20  Score=154.36  Aligned_cols=221  Identities=14%  Similarity=0.113  Sum_probs=143.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cccC----CC-CCccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~-~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.++||||||+|+||++++++|+++|++|++++|+.... ....    .. .....+..+|+.|.+.+.++++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            447899999999999999999999999999999875332 1110    00 0111244679998888876664       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ++|+|||+||.....   ....+.++..++.|+.++.++++++.+. ......++.+++.    ++..       ..++.
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~  153 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI----HAER-------PLKGY  153 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh----hhcC-------CCCCc
Confidence            589999999964322   2234567889999999999999998752 1122344444442    2211       12334


Q ss_pred             Cch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcc-hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..+  .+++++++||+.++|+.... +..... .....+.++      ..+.+++|+++++..
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~d~a~~~~~  226 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEAR-QAILARTPL------KRIGTPEDIAEAVRF  226 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHH-HHHHhcCCc------CCCcCHHHHHHHHHH
Confidence            567 7787777776655543  26899999999999997532 111111 111122222      112458999999977


Q ss_pred             HhhCCC--CCceEEecCCCccC
Q 020254          241 ALSNPS--YRGVINGTAPNPVR  260 (328)
Q Consensus       241 ~~~~~~--~~g~~~i~~~~~~~  260 (328)
                      ++....  .+.+|+++++..++
T Consensus       227 ~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        227 LLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HcCccccccCcEEEECCCeecc
Confidence            665432  34499999987654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.2e-20  Score=156.43  Aligned_cols=235  Identities=19%  Similarity=0.119  Sum_probs=158.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++|+||||+|+||+++++.|+++|++|++++|++.+.......      .....+..+|+.|++++.++++       +
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999986543222110      0111133578988888776664       6


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||....    .....+.....++.|+.++..+++++.+.  ..+..+++++||...  +..         .+.
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~  155 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA--SNT---------HRW  155 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh--cCC---------CCC
Confidence            8999999985321    22344556788899999999998876542  123458999999776  332         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|...+.....+..+   .+++++++|||.+.++............ ......+      ...+++++|+++++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~  229 (276)
T PRK05875        156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP------LPRVGEVEDVANLA  229 (276)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC------CCCCcCHHHHHHHH
Confidence            4567 7777777766655433   3799999999998776421110000000 1111111      12367899999999


Q ss_pred             HHHhhCCC---CCceEEecCCCcc----CHHHHHHHHHHHhCC
Q 020254          239 YEALSNPS---YRGVINGTAPNPV----RLAEMCDHLGNVLGR  274 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~~----~~~e~~~~i~~~~g~  274 (328)
                      ..++..+.   .+.++++.++..+    +..|+++.+.+..|.
T Consensus       230 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        230 MFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             HHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            99998754   2459999988765    777777777655543

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.5e-20  Score=160.09  Aligned_cols=236  Identities=12%  Similarity=0.021  Sum_probs=157.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +++|+||||+|+||++++++|+++|++|++++|++......... ........+|+.|.+++.++++       ++|+||
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999987654322111 0111134679988887766553       679999


Q ss_pred             ECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |+||.....   +...+.++..+++|+.++..+++++    ++  .+.+++|++||.+.  +...         +....|
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~vsS~~~--~~~~---------~~~~~Y  149 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE--QRSGHIIQISSIGG--ISAF---------PMSGIY  149 (275)
T ss_pred             ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEcChhh--cCCC---------CCccHH
Confidence            999975332   3345778899999999988887776    34  45678999999765  4422         122456


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-h--hhhHHHHHHHcCCCCCCCCccccc-ccHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-L--AKMIPLFMMFAGGPLGSGQQWFSW-IHLDDIVNLIY  239 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~  239 (328)
                       .+|...+.....+..+   .|++++++|||.+..+.... .  ............ .+........+ +.++|++++++
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~dva~~~~  228 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLRE-ELAEQWSERSVDGDPEAAAEALL  228 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHH-HHHHHHHhccCCCCHHHHHHHHH
Confidence             6676665555444332   58999999999988764310 0  000000000000 00000111234 88999999999


Q ss_pred             HHhhCCCCCceEEec-CCCccCHHHHHHHHHHHh
Q 020254          240 EALSNPSYRGVINGT-APNPVRLAEMCDHLGNVL  272 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~-~~~~~~~~e~~~~i~~~~  272 (328)
                      .+++.+...+.|.++ ++..+++.++.+.+.+..
T Consensus       229 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        229 KLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             HHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence            999987656655554 446788999999888854

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.85  E-value=6.6e-20  Score=154.41  Aligned_cols=220  Identities=18%  Similarity=0.071  Sum_probs=142.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhh-------cCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDC-------IQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~-------~~~~d~   92 (328)
                      ++||||||+|+||+++++.|+++|++|++++|++.....+...    ........+|+.|.+++.++       +.++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5899999999999999999999999999999987544322110    11111345789888855443       446899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+++....   ........+..+..|+.++..+++++...  +.+.+++|++||...  +...         +..+.|
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~--~~~~---------~~~~~y  150 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHG--LVAS---------PFKSAY  150 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh--cCCC---------CCCchh
Confidence            9999986432   12344556777889999988888776321  156779999998765  3321         122345


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC--------CCCCCCcccccccHHHHH
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--------PLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~v~D~a  235 (328)
                       .+|...+.....+..   ..+++++++||+.++++...   ..........+.        .+......+++++++|+|
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  227 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE---KQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVA  227 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH---HHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHH
Confidence             555544444333222   24899999999999988421   111100000000        011233456799999999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCC
Q 020254          236 NLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++++.++..+.   .+..|++.++.
T Consensus       228 ~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       228 ETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             HHHHHHcCccccCccceEEEEcCcc
Confidence            99999997642   24489998764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.85  E-value=4.2e-20  Score=155.79  Aligned_cols=228  Identities=11%  Similarity=0.023  Sum_probs=151.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.++++||||+|+||.++++.|+++|++|++++|+............ ......+|+.|.++++++++       ++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            34689999999999999999999999999999998765433221110 11244679999888776664       68999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--C-CCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||+|+....   .....+.++..++.|+.++..+++++...  . ....++|++||... .++.          ++...|
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~----------~~~~~Y  153 (257)
T PRK07067         85 FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG-RRGE----------ALVSHY  153 (257)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHh-CCCC----------CCCchh
Confidence            999986432   22345677888999999999999998652  1 12357999998653 1331          234556


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHH----HHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM----MFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                       .+|...+.....+..   ..+++++++|||.++++.............    ......+........+++++|+|+++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  233 (257)
T PRK07067        154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMAL  233 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHH
Confidence             667665555544433   358999999999999974321111110000    000000112223456899999999999


Q ss_pred             HHhhCCC---CCceEEecCCCccC
Q 020254          240 EALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      .++....   .+.+|++.+|..++
T Consensus       234 ~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        234 FLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHhCcccccccCcEEeecCCEeCC
Confidence            9998653   34599998886543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.84  E-value=4.9e-20  Score=155.07  Aligned_cols=238  Identities=19%  Similarity=0.214  Sum_probs=151.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccC---CCCC------ccccCc-----eeec------CChh
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIF---PGKK------TRFFPG-----VMIA------EEPQ   82 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~---~~~~------~~~~~~-----~d~~------~~~~   82 (328)
                      ++||+||||||+|.+|+..|+.+- .+|++++|-.+......   ....      +....+     .|+.      +..+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999875 59999999877322111   0000      000011     2333      4457


Q ss_pred             hHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcc--cccCC
Q 020254           83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE--VFDES  160 (328)
Q Consensus        83 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~--~~~e~  160 (328)
                      +.++.+.+|.|||+|+.++.    ..+.......|+.|+..+++.|..  ...|.++|+||.+++.+....+.  ..++.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~----v~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH----VFPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             HHHHhhhcceEEecchhhcc----cCcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeeeeeccccccCCCccccccc
Confidence            77888899999999997532    224568889999999999999999  77889999999999433322221  12211


Q ss_pred             CC-------CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCC-c--chhhhH----HHHHHHcCCCCCCCCcc
Q 020254          161 SP-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG-G--ALAKMI----PLFMMFAGGPLGSGQQW  225 (328)
Q Consensus       161 ~~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~--~~~~~~----~~~~~~~~~~~~~~~~~  225 (328)
                      .+       +...| .+|+..|........+ |++++|+|||.|-|+.. +  ....+.    .-+... |. +......
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~l-g~-~P~~~~~  231 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQL-GI-APDSEYS  231 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHh-CC-CCCcccc
Confidence            22       34567 8899999888877766 99999999999999864 1  112222    211111 11 1111222


Q ss_pred             cccccHHH-----------HHHHHHHHhhCCC-CCceEE-ecCCCccCHHHHHHHHHH
Q 020254          226 FSWIHLDD-----------IVNLIYEALSNPS-YRGVIN-GTAPNPVRLAEMCDHLGN  270 (328)
Q Consensus       226 ~~~i~v~D-----------~a~~~~~~~~~~~-~~g~~~-i~~~~~~~~~e~~~~i~~  270 (328)
                      .+.+.++.           +++++..+..++. ....|+ ..-|..+...++.+.+.+
T Consensus       232 ~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         232 LDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             hhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            23333222           3333333332222 223444 233778999999999988

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.6e-19  Score=151.68  Aligned_cols=222  Identities=14%  Similarity=0.004  Sum_probs=143.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ++++|+||||+|+||++++++|+++|++|++++|++.+...+.... .......+|+.|.+++.++++       ++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3568999999999999999999999999999999876543332211 011134579999888876664       58999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+.....+++|+.++.++++++...  ..+.+++|++||.+.  +..         .+....| 
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~--~~~---------~~~~~~Y~  151 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGG--LIT---------MPGIGYYC  151 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccc--cCC---------CCCcchhH
Confidence            999997432   22334556778999999999999986431  145568999999765  321         1233456 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc--------hhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      .+|...+.....+..+   .|++++++|||.+.++..+.        .......+.......  .......+..++|+|+
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~  229 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR--EAKSGKQPGDPAKAAQ  229 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH--HhhccCCCCCHHHHHH
Confidence            6676666555444332   48999999999998763211        111111110000000  0011123568999999


Q ss_pred             HHHHHhhCCCCCceEEecCC
Q 020254          237 LIYEALSNPSYRGVINGTAP  256 (328)
Q Consensus       237 ~~~~~~~~~~~~g~~~i~~~  256 (328)
                      +++.++..+.....|.++..
T Consensus       230 ~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        230 AILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             HHHHHHcCCCCCeeEeccHH
Confidence            99999987664445544433

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=153.29  Aligned_cols=219  Identities=15%  Similarity=0.043  Sum_probs=140.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .++|+||||+|+||.+++++|+++|++|++++|++.+.......    ........+|+.|.+++.++++       ++|
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   83 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD   83 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999987654332111    1111134579999888776664       689


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHH----HHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|||+|+.....   .......+..++.|+.++..+    ++++++  .+.+++|++||.... ++.          +..
T Consensus        84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~~-~~~----------~~~  150 (258)
T PRK12429         84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA--QGGGRIINMASVHGL-VGS----------AGK  150 (258)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh--cCCeEEEEEcchhhc-cCC----------CCc
Confidence            999999864332   233455667788999995444    455555  567899999997651 221          122


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC--------CCCCCcccccccHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--------LGSGQQWFSWIHLD  232 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~v~  232 (328)
                      +.| .+|...+.....+..   ..++.++++|||.++++.....   ........+.+        +........+++++
T Consensus       151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (258)
T PRK12429        151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ---IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE  227 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh---hhhhccccCCChHHHHHHHHhccCCccccCCHH
Confidence            345 445444433332221   2489999999999998753210   00000000000        11122345699999


Q ss_pred             HHHHHHHHHhhCCC--C-CceEEecCCC
Q 020254          233 DIVNLIYEALSNPS--Y-RGVINGTAPN  257 (328)
Q Consensus       233 D~a~~~~~~~~~~~--~-~g~~~i~~~~  257 (328)
                      |+|+++..++....  . +..|++.+|.
T Consensus       228 d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        228 EIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             HHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            99999999987643  2 3488887763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.83  E-value=3e-19  Score=149.54  Aligned_cols=218  Identities=20%  Similarity=0.150  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ++|+|+||||+|+||.++++.|+++|++|++++|++.+......    ......+..+|+.|++++.++++       ++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34689999999999999999999999999999998765332211    11111234478988887766654       46


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||++|....   .....+.....++.|+.++.++++++...  ..+.+++|++||.... ++.          +...
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~-~~~----------~~~~  152 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV-TGN----------PGQT  152 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-cCC----------CCCc
Confidence            999999986433   12344556778899999999998888531  1466799999987541 221          2233


Q ss_pred             ch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....+..   ..+++++++||+.++++........... ......+      ...+++++|+++++..+
T Consensus       153 ~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~dva~~~~~~  225 (246)
T PRK05653        153 NYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKA-EILKEIP------LGRLGQPEEVANAVAFL  225 (246)
T ss_pred             HhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHH-HHHhcCC------CCCCcCHHHHHHHHHHH
Confidence            45 556554444443332   2489999999999999864321111111 1111111      24578899999999999


Q ss_pred             hhCCC---CCceEEecCCC
Q 020254          242 LSNPS---YRGVINGTAPN  257 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~  257 (328)
                      +....   .+.+|++++|.
T Consensus       226 ~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        226 ASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             cCchhcCccCCEEEeCCCe
Confidence            87533   23489988875

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.1e-19  Score=153.46  Aligned_cols=225  Identities=15%  Similarity=0.056  Sum_probs=145.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHh---h---cCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRD---C---IQGS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~---~---~~~~   90 (328)
                      +++++||||+|+||+++++.|+++|++|++++|++.........      .....+..+|+.|++++++   .   +.++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            46799999999999999999999999999999987643322110      0111244679998887764   1   2367


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||++|....   .....+.....++.|+.++.++++++...  ..+.+++|++||... .++.          +...
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~-~~~~----------~~~~  151 (280)
T PRK06914         83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG-RVGF----------PGLS  151 (280)
T ss_pred             eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc-cCCC----------CCCc
Confidence            999999986432   22344566778889999988888875321  145678999998643 1432          2233


Q ss_pred             ch-HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcch-----------hhhHHHHHHHcCCCCCCCCccccccc
Q 020254          166 DY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (328)
                      .| .+|...+.....+.   ...+++++++|||.+.++.....           ............. +  ......+++
T Consensus       152 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~  228 (280)
T PRK06914        152 PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH-I--NSGSDTFGN  228 (280)
T ss_pred             hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH-H--hhhhhccCC
Confidence            46 56666555544443   23589999999999988732100           0000000000000 0  011234789


Q ss_pred             HHHHHHHHHHHhhCCCCCceEEecCCCccCH
Q 020254          231 LDDIVNLIYEALSNPSYRGVINGTAPNPVRL  261 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~  261 (328)
                      ++|+|++++.++.++.....|+++++..+++
T Consensus       229 ~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (280)
T PRK06914        229 PIDVANLIVEIAESKRPKLRYPIGKGVKLMI  259 (280)
T ss_pred             HHHHHHHHHHHHcCCCCCcccccCCchHHHH
Confidence            9999999999999876556788887765544

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.5e-19  Score=149.55  Aligned_cols=232  Identities=16%  Similarity=0.097  Sum_probs=155.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC--CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK--KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +++++||||+|+||.+++++|+++|++|++++|++.+........  .......+|+.|.+++.+++.       ++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999999999876543322110  011144689999888876664       58999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||++|.....   .............|+.++..+++++...  +.+.++++++||...  +...          ..+.| 
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~----------~~~~y~  149 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG--MAAL----------GHPAYS  149 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh--cCCC----------CCcccH
Confidence            9999864321   2233445666789999998888877431  145568999998643  2111          11346 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHH-HHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIP-LFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      .+|...+.....+..+   .++++.++|||.+.++.........+ .......     .....++++++|++++++.++.
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~a~~~~~l~~  224 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK-----WYPLQDFATPDDVANAVLFLAS  224 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh-----cCCCCCCCCHHHHHHHHHHHcC
Confidence            6666665555554433   37999999999998875321100011 1111100     1123568999999999999997


Q ss_pred             CCC--CCc-eEEecCCCccCHHHHHHHHHHH
Q 020254          244 NPS--YRG-VINGTAPNPVRLAEMCDHLGNV  271 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~~~~~~~e~~~~i~~~  271 (328)
                      ...  ..| ++++.++...+.+|+++.+.+.
T Consensus       225 ~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        225 PAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             chhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence            532  334 7788888888999999887653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=2.5e-19  Score=150.91  Aligned_cols=222  Identities=15%  Similarity=0.104  Sum_probs=148.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++||||||+|+||.+++++|+++|++|++++|++.+.......    ........+|+.|.++++++++       ++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            457999999999999999999999999999999987543322111    1111134578989888877664       58


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||++|.....   ....+..+..++.|+.++.++++++.+.  +.+.+++|++||...  +..         .+...
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~~---------~~~~~  157 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS--ALA---------RPGIA  157 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh--ccC---------CCCCc
Confidence            9999999974322   2345666788899999999999988752  135678999998754  221         12234


Q ss_pred             ch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHH-HcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....+..   ..|+++.++|||.+.++........-..... ....++      ..+..++|+|.+++.
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  231 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPA------GRWGKVEELVGACVF  231 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            56 667666666555443   3589999999999998853211000001111 112222      236789999999999


Q ss_pred             HhhCCC--CCc-eEEecCCCccC
Q 020254          241 ALSNPS--YRG-VINGTAPNPVR  260 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~~~~~  260 (328)
                      ++....  ..| ++++.++..++
T Consensus       232 l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        232 LASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HcCchhcCccCcEEEECCCeecc
Confidence            987543  234 88888876544

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.3e-19  Score=151.97  Aligned_cols=222  Identities=13%  Similarity=0.076  Sum_probs=144.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|+.... ...    ...........+|+.|++++.++++       +
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            347899999999999999999999999999999975431 111    1101111134579999888876654       6


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      +|+|||+|+.....   ...+...+++|+.++.++++++.+.-....++|++||.... +...     .+..+....| .
T Consensus        85 ~d~vi~~ag~~~~~---~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-~~~~-----~~~~~~~~~Y~~  155 (248)
T PRK07806         85 LDALVLNASGGMES---GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH-FIPT-----VKTMPEYEPVAR  155 (248)
T ss_pred             CcEEEECCCCCCCC---CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh-cCcc-----ccCCccccHHHH
Confidence            89999999863221   22345678899999999999998731223589999996541 1111     1112223456 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      +|...+.....+..+   .++++++++|+.+-++-.... ....+..  .....    .....+++++|++++++.+++.
T Consensus       156 sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~dva~~~~~l~~~  229 (248)
T PRK07806        156 SKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGA--IEARR----EAAGKLYTVSEFAAEVARAVTA  229 (248)
T ss_pred             HHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHH--HHHHH----hhhcccCCHHHHHHHHHHHhhc
Confidence            787777766555432   479999999987766531110 0000000  00000    0113589999999999999987


Q ss_pred             CCCCc-eEEecCCCc
Q 020254          245 PSYRG-VINGTAPNP  258 (328)
Q Consensus       245 ~~~~g-~~~i~~~~~  258 (328)
                      +...| +|++++++.
T Consensus       230 ~~~~g~~~~i~~~~~  244 (248)
T PRK07806        230 PVPSGHIEYVGGADY  244 (248)
T ss_pred             cccCccEEEecCccc
Confidence            65445 899998874

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.8e-19  Score=150.65  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+++++||||+|+||+++++.|+++|++|++++|+.........    ......+..+|+.+.+++.++++       ++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            44689999999999999999999999999999987654322211    11111133578998888876654       67


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||....   .....+.....++.|+.++.++++++...  +.+..++|++||...  |...         +...
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  157 (274)
T PRK07775         89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA--LRQR---------PHMG  157 (274)
T ss_pred             CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh--cCCC---------CCcc
Confidence            999999986432   12334566777899999999998887531  134567999999876  5422         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC-cchhh-hHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...+.....+...   .|++++++|||.+.++.. ..... ..........   ........+++++|+|++++
T Consensus       158 ~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~a~~  234 (274)
T PRK07775        158 AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK---WGQARHDYFLRASDLARAIT  234 (274)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH---hcccccccccCHHHHHHHHH
Confidence            57 7777777666555432   389999999998865522 11111 1111110000   01122355899999999999


Q ss_pred             HHhhCCCCCceEEec
Q 020254          240 EALSNPSYRGVINGT  254 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~  254 (328)
                      .+++.+....+||+.
T Consensus       235 ~~~~~~~~~~~~~~~  249 (274)
T PRK07775        235 FVAETPRGAHVVNME  249 (274)
T ss_pred             HHhcCCCCCCeeEEe
Confidence            999876534478885

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.1e-19  Score=150.37  Aligned_cols=225  Identities=17%  Similarity=0.077  Sum_probs=144.0

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--ccccCceeecCChhhHhhcC-------C
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ...+.+++|||||+|+||++++++|+++|++|++++|++...........  ......+|+.|++++.++++       +
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            33456899999999999999999999999999999998754433221100  01144679988887776653       6


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-CcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|+|||+++....    .....+.....++.|+.++..+++++...  ..+. +.++++||... .++.          +
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~-~~~~----------~  155 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG-RLGY----------P  155 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccc-ccCC----------C
Confidence            8999999996411    23445677888999999999988887431  1233 45777766443 1221          1


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-------CCCCcccccccH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-------GSGQQWFSWIHL  231 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~v  231 (328)
                      ....| .+|...+.....++..   .+++++++|||.++++....   .........+...       ........++++
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR---VIEARAQQLGIGLDEMEQEYLEKISLGRMVEP  232 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH---HhhhhhhccCCChhHHHHHHHhcCCCCCCCCH
Confidence            22346 6666555554443322   48999999999999985321   1110000000000       000112348999


Q ss_pred             HHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          232 DDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +|+++++..++....   .+..|++.++.
T Consensus       233 ~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        233 EDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            999999998886432   23489998875

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6.5e-19  Score=147.95  Aligned_cols=217  Identities=20%  Similarity=0.161  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++++||||+|+||.+++++|+++|++|++++|+.........    .........+|+.|.++++++++       ++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999998654322211    11111134578988887765553       68


Q ss_pred             cEEEECCCCCCC------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           91 TAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        91 d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      |+|||+||....      .....+..+..++.|+.++.++++++...  ..+.+++|++||...  |..           
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~-----------  151 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA--WLY-----------  151 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc--cCC-----------
Confidence            999999997421      12334567778899999999999888753  134568999999876  532           


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch--hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                       .+.| .+|...+.....+..+   .++.+++++||.+..+.....  ..+..  ....+.+.      .-+.+++|+++
T Consensus       152 -~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d~a~  222 (250)
T PRK07774        152 -SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVA--DMVKGIPL------SRMGTPEDLVG  222 (250)
T ss_pred             -ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHH--HHHhcCCC------CCCcCHHHHHH
Confidence             2456 6777666665555443   379999999999887754221  11111  11222222      12467899999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCccC
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      +++.++....   .+.+|++.++..++
T Consensus       223 ~~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        223 MCLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHHHHhChhhhCcCCCEEEECCCeecc
Confidence            9999987642   34499999886543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=1.7e-18  Score=145.86  Aligned_cols=219  Identities=15%  Similarity=0.138  Sum_probs=144.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +++|+||||+|+||++++++|+++|++|++++|+.... ...    ........+..+|+.+++++.++++       ++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999875431 111    0111111244689999887766553       68


Q ss_pred             cEEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCC-----CCcEEEEecccceeecCCCcccc
Q 020254           91 TAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEG-----VRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        91 d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-----~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      |+|||++|....     .....+.++..++.|+.++.++++++...   ..+     ..++|++||.... ++.      
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~------  154 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI-MVS------  154 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc-cCC------
Confidence            999999986421     12345677888999999999998887542   011     4579999997651 221      


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  232 (328)
                          +....| .+|...+.....+..+   .+++++++|||.+.++..... ..+...+.. ...+      ...+.+++
T Consensus       155 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~  223 (256)
T PRK12745        155 ----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAK-GLVP------MPRWGEPE  223 (256)
T ss_pred             ----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhh-cCCC------cCCCcCHH
Confidence                122356 6777776665555432   589999999999988753211 111111110 0111      23467999


Q ss_pred             HHHHHHHHHhhCCC---CCceEEecCCCcc
Q 020254          233 DIVNLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       233 D~a~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      |+++++..++....   .+.+|++.++...
T Consensus       224 d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        224 DVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            99999999886542   3349999887543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.82  E-value=8.1e-19  Score=149.27  Aligned_cols=219  Identities=16%  Similarity=0.065  Sum_probs=142.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~   95 (328)
                      +++|+||||+|+||++++++|+++|++|++++|+..+........  .....+|+.|.++++++++       ++|+|||
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLG--VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            478999999999999999999999999999999876544332211  1245689999988877764       7899999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHH----HHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTS----KVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~----~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      +||....   .+...+.++..+++|+.++.    .+++.+++  .+.+++|++||.+.  +..         .+....| 
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y~  147 (273)
T PRK06182         81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA--QRSGRIINISSMGG--KIY---------TPLGAWYH  147 (273)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchhh--cCC---------CCCccHhH
Confidence            9997432   22345677888999998854    44455555  56678999999654  211         1122346 


Q ss_pred             HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhh-h---------HHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          168 LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAK-M---------IPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       168 ~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      .+|...+.....+.   ...+++++++|||.+.++....... +         ........ ..+........+.+++|+
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v  226 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVA-ASMRSTYGSGRLSDPSVI  226 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHH-HHHHHhhccccCCCHHHH
Confidence            66666665543332   2358999999999998874211000 0         00000000 000000112346799999


Q ss_pred             HHHHHHHhhCCCCCceEEecCCC
Q 020254          235 VNLIYEALSNPSYRGVINGTAPN  257 (328)
Q Consensus       235 a~~~~~~~~~~~~~g~~~i~~~~  257 (328)
                      |++++.++........|+++.+.
T Consensus       227 A~~i~~~~~~~~~~~~~~~g~~~  249 (273)
T PRK06182        227 ADAISKAVTARRPKTRYAVGFGA  249 (273)
T ss_pred             HHHHHHHHhCCCCCceeecCcch
Confidence            99999999875444577776543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.81  E-value=2.1e-18  Score=145.63  Aligned_cols=217  Identities=16%  Similarity=0.088  Sum_probs=141.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCCCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      ..++++||||+|+||++++++|+++|++|++++|+.....   .+...........+|+.|.+++.++++       ++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            4578999999999999999999999999999999753211   111111111234579988877765553       689


Q ss_pred             EEEECCCCCC----CCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      ++||+||...    .........+..++.|+.++..+++.+...  +.+..++|++||...  |+..           ..
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~-----------~~  153 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIAT--RGIN-----------RV  153 (260)
T ss_pred             EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccc--cCCC-----------CC
Confidence            9999998531    123445667778889998877555544421  145578999999875  5421           23


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc----------hhhhHHHH--HHHcCCCCCCCCcccccc
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~i  229 (328)
                      .| .+|...+.....+..+   .++++++++||.++++....          ...+.+.+  ......|+      .-+.
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  227 (260)
T PRK12823        154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM------KRYG  227 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc------ccCC
Confidence            46 7787777766665543   38999999999999973110          00111111  11112222      1245


Q ss_pred             cHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          230 HLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++|++++++.++....   .+.++++.+++
T Consensus       228 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        228 TIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            78999999999986543   33488887765

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1e-18  Score=147.15  Aligned_cols=219  Identities=16%  Similarity=0.107  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccC----CCCCccccCceeecCChhhHhhcC--------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~--------   88 (328)
                      +.++|+||||+|+||++++++|+++|++|+++ .|+..+.....    ..........+|+.|.+++.++++        
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            34799999999999999999999999999875 56543322111    111111244679999988876654        


Q ss_pred             -----CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 -----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 -----~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                           ++|+|||+||.....   +.........++.|+.++.++++++.+......++|++||..+  +...        
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~--~~~~--------  154 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV--RLGF--------  154 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh--cCCC--------
Confidence                 489999999974332   2234555778889999999999988763223358999999876  4421        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                       +....| .+|...+.....+..   ..++++++++||.+.++-......--.........     .....+++++|+++
T Consensus       155 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~  228 (254)
T PRK12746        155 -TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS-----SVFGRIGQVEDIAD  228 (254)
T ss_pred             -CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc-----CCcCCCCCHHHHHH
Confidence             223456 666666555433333   25899999999999887421110000000111111     11234678999999


Q ss_pred             HHHHHhhCCC---CCceEEecCC
Q 020254          237 LIYEALSNPS---YRGVINGTAP  256 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~  256 (328)
                      ++..++..+.   .+.+|++.++
T Consensus       229 ~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        229 AVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHcCcccCCcCCCEEEeCCC
Confidence            9998887643   3459999776

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7.5e-19  Score=145.35  Aligned_cols=207  Identities=13%  Similarity=0.103  Sum_probs=135.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~   99 (328)
                      ||+|+||||+|+||+++++.|+++ ++|++++|+...............+..+|+.|.+++.++++   ++|+|||+++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            578999999999999999999999 99999999875533221111011245689999999888776   59999999997


Q ss_pred             CCCC---CCChhHHHHHHHhhhhhH----HHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254          100 PIGT---RWSSEIKKEIKESRIRVT----SKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus       100 ~~~~---~~~~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      ....   ....+.....++.|+.+.    +.+++++++   ..+++|++||...  ++...         ....| ..|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~v~~ss~~~--~~~~~---------~~~~y~~~K~  147 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA---AHGHVVFINSGAG--LRANP---------GWGSYAASKF  147 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCeEEEEcchHh--cCcCC---------CCchHHHHHH
Confidence            4322   233455667788888884    444554544   3568999998765  44221         12345 5665


Q ss_pred             HHHHHHHHhccc-CC-CeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCc
Q 020254          172 CREWEGTALKVN-KD-VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  249 (328)
Q Consensus       172 ~~~~~~~~~~~~-~~-~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  249 (328)
                      ..+.....+... .+ +++..++||.+.++...   .+.    ...+..    .....+++++|++++++.+++++....
T Consensus       148 a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~---~~~----~~~~~~----~~~~~~~~~~dva~~~~~~l~~~~~~~  216 (227)
T PRK08219        148 ALRALADALREEEPGNVRVTSVHPGRTDTDMQR---GLV----AQEGGE----YDPERYLRPETVAKAVRFAVDAPPDAH  216 (227)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEecCCccchHhh---hhh----hhhccc----cCCCCCCCHHHHHHHHHHHHcCCCCCc
Confidence            555544443322 24 88899998876654211   110    001111    112457999999999999998876444


Q ss_pred             eEEecC
Q 020254          250 VINGTA  255 (328)
Q Consensus       250 ~~~i~~  255 (328)
                      ++++.-
T Consensus       217 ~~~~~~  222 (227)
T PRK08219        217 ITEVVV  222 (227)
T ss_pred             cceEEE
Confidence            777754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.2e-18  Score=143.69  Aligned_cols=211  Identities=18%  Similarity=0.224  Sum_probs=142.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC--CccccCceeecCChhhHhhcC-------CCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK--KTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      +.++||||||+|+||++++++|+++|++|++++|++.+........  .......+|+.|.+++.++++       ++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4579999999999999999999999999999999875532211100  001134578888887776654       6899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+++....   .....+.....++.|+.++.++++++.+.  ..+.+++|++||...  ++..         +....|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~y  154 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA--LKAG---------PGMGAY  154 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHh--ccCC---------CCcchh
Confidence            9999986322   12334556677889999999998887532  145789999999876  5432         223345


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       ..|...+.....+..   ..++++.++|||.++++.....            .+   ......+++++|+++++..++.
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------~~---~~~~~~~~~~~dva~~~~~~l~  219 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------MP---DADFSRWVTPEQIAAVIAFLLS  219 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------CC---chhhhcCCCHHHHHHHHHHHhC
Confidence             555444333332222   2489999999999998832100            00   0112237999999999999998


Q ss_pred             CCC--CCc-eEEecCCCc
Q 020254          244 NPS--YRG-VINGTAPNP  258 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~~~  258 (328)
                      ...  ..| .+.+.++..
T Consensus       220 ~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        220 DEAQAITGASIPVDGGVA  237 (239)
T ss_pred             cccccccceEEEecCCEe
Confidence            653  234 777777653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=8.2e-19  Score=147.48  Aligned_cols=222  Identities=15%  Similarity=0.072  Sum_probs=144.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+++||||||+|+||++++++|+++|++|++..|+.... ...    ...........+|+.+.+++..+++       +
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            347999999999999999999999999998877654221 111    0111111134578888877665543       6


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|+|||+||.....   ....+..+..+++|+.+...+++++.+.....+++|++||...  |...         ++...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~  153 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--IRPA---------YGLSI  153 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc--cCCC---------CCchH
Confidence            89999999964322   1233445678899999999999988863122358999999765  5421         23356


Q ss_pred             h-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHH-HHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|...+.....+..+.  ++.+.+++||.+.++........... ......    .......+++++|+|++++.++
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~~~~~~  229 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE----KFTLMGKILDPEEVAEFVAAIL  229 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH----hcCcCCCCCCHHHHHHHHHHHh
Confidence            7 77777666666554432  78999999999987742111110000 000000    0111235899999999999999


Q ss_pred             hCCCC-CceEEecCCCc
Q 020254          243 SNPSY-RGVINGTAPNP  258 (328)
Q Consensus       243 ~~~~~-~g~~~i~~~~~  258 (328)
                      ..+.. +++|++.++..
T Consensus       230 ~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        230 KIESITGQVFVLDSGES  246 (252)
T ss_pred             CccccCCCeEEecCCee
Confidence            76553 45999988863

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.80  E-value=1.6e-18  Score=146.32  Aligned_cols=222  Identities=14%  Similarity=0.060  Sum_probs=144.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----C-CccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++|+||||+|+||++++++|+++|++|++++|+..........     . .......+|+.+.+++.++++       +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999986543322110     0 011244678888887765553       6


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||....   .....+.++..++.|+.++..+++++.+.  ..+ ..++|++||... .++..          .
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~~----------~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSG-KVGSK----------H  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccc-ccCCC----------C
Confidence            8999999986533   23345667888899999988777766542  133 358999988642 14421          2


Q ss_pred             CCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC-------CCCCCcccccccHH
Q 020254          164 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIHLD  232 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~v~  232 (328)
                      ...| .+|...+.....+..   ..|+++.++|||.++++...  ..+++.+....+.+       .........+++++
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF--QSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ  228 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh--hhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHH
Confidence            2456 667665555444432   35899999999998876421  12222211111100       01122234578999


Q ss_pred             HHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          233 DIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       233 D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      |++.+++.++....   .+.+|++.+++
T Consensus       229 dv~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        229 DVLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HHHHHHHHHcCcccccccCceEEEcCCE
Confidence            99999999887543   23489998875

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.80  E-value=2.6e-18  Score=136.67  Aligned_cols=205  Identities=14%  Similarity=0.139  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--ccccCceeecCChhhHhhc-------CCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCI-------QGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~~d~   92 (328)
                      ..|.++|||||+.||.++++.|.+.|++|++..|+.++..++.....  ......+|++|.+++++++       .++|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            34789999999999999999999999999999999988766654332  1224468999998866554       36999


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +||+||....   .....++++.++++|+.+..+...++...  ..+...+|.+||.+. .|.          .|..+.|
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG-~~~----------y~~~~vY  153 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAG-RYP----------YPGGAVY  153 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccc-ccc----------CCCCccc
Confidence            9999997544   34556889999999999988888777652  245568999999764 122          3445667


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh--HHHH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM--IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                       ..|+........++.+   .+++++.+-||.+-....+....-  .... ...         .....+..+|+|+++.+
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y---------~~~~~l~p~dIA~~V~~  224 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY---------KGGTALTPEDIAEAVLF  224 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh---------ccCCCCCHHHHHHHHHH
Confidence             6676666655444443   489999999999866432111000  0000 101         12347899999999999


Q ss_pred             HhhCCC
Q 020254          241 ALSNPS  246 (328)
Q Consensus       241 ~~~~~~  246 (328)
                      ++++|.
T Consensus       225 ~~~~P~  230 (246)
T COG4221         225 AATQPQ  230 (246)
T ss_pred             HHhCCC
Confidence            999987

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.80  E-value=1.8e-19  Score=149.51  Aligned_cols=217  Identities=22%  Similarity=0.249  Sum_probs=141.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+|+||||.+|+++++.|++.+++|++++|++++.  ..+...+.  ....+|+.|.+.+.++++++|+||.+.+...  
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~--~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~--   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGA--EVVEADYDDPESLVAALKGVDAVFSVTPPSH--   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTT--EEEES-TT-HHHHHHHHTTCSEEEEESSCSC--
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccc--eEeecccCCHHHHHHHHcCCceEEeecCcch--
Confidence            79999999999999999999999999999998542  22221211  1346788899999999999999999987531  


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhccc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  183 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  183 (328)
                                 ........++++++++  .++++||+.|....  +.     ......|..+.+..|.  +.+...  .+
T Consensus        77 -----------~~~~~~~~~li~Aa~~--agVk~~v~ss~~~~--~~-----~~~~~~p~~~~~~~k~--~ie~~l--~~  132 (233)
T PF05368_consen   77 -----------PSELEQQKNLIDAAKA--AGVKHFVPSSFGAD--YD-----ESSGSEPEIPHFDQKA--EIEEYL--RE  132 (233)
T ss_dssp             -----------CCHHHHHHHHHHHHHH--HT-SEEEESEESSG--TT-----TTTTSTTHHHHHHHHH--HHHHHH--HH
T ss_pred             -----------hhhhhhhhhHHHhhhc--cccceEEEEEeccc--cc-----ccccccccchhhhhhh--hhhhhh--hh
Confidence                       1224556799999999  68999886443332  21     0011111122233332  222222  22


Q ss_pred             CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC----CC-CCCCccccc-ccHHHHHHHHHHHhhCCCCC--c-eEEec
Q 020254          184 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PL-GSGQQWFSW-IHLDDIVNLIYEALSNPSYR--G-VINGT  254 (328)
Q Consensus       184 ~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~--g-~~~i~  254 (328)
                      .+++++++|||..+.....   .+.. .......    .+ ++++....+ +..+|+++++..++..+...  + .+.++
T Consensus       133 ~~i~~t~i~~g~f~e~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~  208 (233)
T PF05368_consen  133 SGIPYTIIRPGFFMENLLP---PFAP-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA  208 (233)
T ss_dssp             CTSEBEEEEE-EEHHHHHT---TTHH-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG
T ss_pred             ccccceeccccchhhhhhh---hhcc-cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC
Confidence            4999999999986654211   1111 1011111    11 455555566 49999999999999997633  4 66665


Q ss_pred             CCCccCHHHHHHHHHHHhCCC
Q 020254          255 APNPVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       255 ~~~~~~~~e~~~~i~~~~g~~  275 (328)
                      + +.+|..|+++.+.+.+|++
T Consensus       209 ~-~~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  209 G-ETLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             G-GEEEHHHHHHHHHHHHTSE
T ss_pred             C-CCCCHHHHHHHHHHHHCCc
Confidence            5 7799999999999999976

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.8e-18  Score=145.79  Aligned_cols=235  Identities=10%  Similarity=-0.005  Sum_probs=149.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.++++||||+|+||+++++.|+++|++|++++|+.........    .........+|+.|.+++.++++       +
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            345789999999999999999999999999999998755433211    11111234679999888876653       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||....   .....+..+..+++|+.++.++++++...  ..+ ..++|++||...  +.+.         +.
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~--~~~~---------~~  152 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAG--LVPN---------AG  152 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhh--ccCC---------CC
Confidence            7999999997432   23445667888999999999998887531  122 467999999765  4321         23


Q ss_pred             CCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC---CCCCCCcccccccHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~D~a~  236 (328)
                      ...| .+|.......+.+..   ..|+++++++||.+.++.......... .......   ..+......++++++|+|+
T Consensus       153 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (275)
T PRK05876        153 LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG-AACAQSSTTGSPGPLPLQDDNLGVDDIAQ  231 (275)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC-ccccccccccccccccccccCCCHHHHHH
Confidence            3456 666653333333222   248999999999998774221111000 0000000   1122233456899999999


Q ss_pred             HHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHh
Q 020254          237 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVL  272 (328)
Q Consensus       237 ~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~  272 (328)
                      .++..+..+.   .|.+.+  +.....+...+.+..
T Consensus       232 ~~~~ai~~~~---~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        232 LTADAILANR---LYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             HHHHHHHcCC---eEEecC--hhhHHHHHHHHHHHH
Confidence            9999998642   454543  244455555544443

>PRK06128 oxidoreductase; Provisional

Probab=99.80  E-value=8.1e-18  Score=144.93  Aligned_cols=220  Identities=14%  Similarity=0.047  Sum_probs=148.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++||||||+|+||+++++.|++.|++|++..++....  ...    ...........+|+.|.++++++++       +
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  134 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGG  134 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999998887754321  111    1111111234579998887776653       6


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|+|||+||....    .+...+.++..+++|+.++..+++++........++|++||...  |....         ...
T Consensus       135 iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~~~---------~~~  203 (300)
T PRK06128        135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS--YQPSP---------TLL  203 (300)
T ss_pred             CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc--cCCCC---------Cch
Confidence            8999999996321    23456788999999999999999999763122358999999876  54321         223


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHH-cCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....+..+   .|+++.+++||.+.++........-...... ...++      ..+...+|++.+++.
T Consensus       204 ~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~~~~  277 (300)
T PRK06128        204 DYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPM------KRPGQPVEMAPLYVL  277 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCC------CCCcCHHHHHHHHHH
Confidence            57 7777766666555443   4899999999999988531110001111111 12222      236789999999999


Q ss_pred             HhhCCC---CCceEEecCCCcc
Q 020254          241 ALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++....   .+.+|++.++..+
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeC
Confidence            887543   2348999887644

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=3.2e-18  Score=143.80  Aligned_cols=219  Identities=18%  Similarity=0.082  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      ..++|+||||+|+||.+++++|+++|++|++++|++.+.......   .....+..+|+.|.+++..+++       ++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            346899999999999999999999999999999997654332111   0111244679999988876653       579


Q ss_pred             EEEECCCCCCCC----CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+++.....    ....+.++..++.|+.++..+++.+...  +.+.+++|++||...  +++..         ...
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~---------~~~  152 (251)
T PRK07231         84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAG--LRPRP---------GLG  152 (251)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--cCCCC---------Cch
Confidence            999999864221    2345667888999999877777766542  145678999999876  44221         233


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh-hHHHH--HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      .| .+|...+.....+..+   .++++++++||.+.++....... ..+..  ......      ....+++++|+|.++
T Consensus       153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~  226 (251)
T PRK07231        153 WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI------PLGRLGTPEDIANAA  226 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC------CCCCCcCHHHHHHHH
Confidence            45 5565554444333322   38999999999997653211100 00011  111111      123478999999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++..+.  ..| .+.+.++.
T Consensus       227 ~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        227 LFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             HHHhCccccCCCCCeEEECCCc
Confidence            99997643  334 66776654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.79  E-value=7.2e-18  Score=141.34  Aligned_cols=218  Identities=12%  Similarity=0.054  Sum_probs=143.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++++||||+|+||++++++|+++|++|+++.++. .......    .......+..+|+.|.+.+.++++       .
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999998765543 2221111    111112245689999888777664       4


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+|+.....   .......++.++.|+.++..+++++...  +.+..++|++||... .++.          +..
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~----------~~~  153 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIG-QAGG----------FGQ  153 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhh-cCCC----------CCC
Confidence            79999999974322   2234677888999999999999988742  134568999998654 1221          223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..+   .++++++++||.+.++.......... ......      .....+.+++|++++++.
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~------~~~~~~~~~edva~~~~~  226 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVR-QKIVAK------IPKKRFGQADEIAKGVVY  226 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHH-HHHHHh------CCCCCCcCHHHHHHHHHH
Confidence            456 6676555554333332   48999999999997653211110000 011111      123457999999999999


Q ss_pred             HhhCCC--CCceEEecCCC
Q 020254          241 ALSNPS--YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~--~~g~~~i~~~~  257 (328)
                      ++....  .+..|++.++.
T Consensus       227 ~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        227 LCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HcCcccCccCCEEEeCCCc
Confidence            987542  34599998874

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.2e-17  Score=140.18  Aligned_cols=216  Identities=15%  Similarity=0.090  Sum_probs=141.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc--------CCCCCccccCceeecCChhhHhhc------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--------FPGKKTRFFPGVMIAEEPQWRDCI------   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~------   87 (328)
                      ++|+|+||||+|+||+++++.|+++|++|++++|........        ........+..+|+.|.+.+.+++      
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999987753321111        010111124467888888877665      


Q ss_pred             -CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHh-cC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           88 -QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN-ES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        88 -~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                       .++|+|||++|....   .....+.+...++.|+.++..+++++. ..  ..+.+++|++||...  +...        
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~--------  154 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAG--VRGN--------  154 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchh--cCCC--------
Confidence             368999999997542   233445677888999999999999988 11  145678999999765  3321        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                       +....| .+|...+.....+..+   .+++++++|||.+.++.....   ..........+.      ..+.+++|+++
T Consensus       155 -~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~~~va~  224 (249)
T PRK12827        155 -RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA---APTEHLLNPVPV------QRLGEPDEVAA  224 (249)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc---chHHHHHhhCCC------cCCcCHHHHHH
Confidence             122346 6665544444333322   489999999999999853211   110111111111      12458899999


Q ss_pred             HHHHHhhCCC--C-CceEEecCCC
Q 020254          237 LIYEALSNPS--Y-RGVINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~--~-~g~~~i~~~~  257 (328)
                      ++..++....  . +.++++.++.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        225 LVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHHHHcCcccCCccCcEEEeCCCC
Confidence            9999886533  2 3377776653

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.79  E-value=2.3e-18  Score=134.61  Aligned_cols=286  Identities=13%  Similarity=0.125  Sum_probs=191.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC-CCe-EEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      ....+|||||+-|.+|..+++.|..+ |.+ |+.-+....+ ......+.   ++-.|+.|...+++.+-  .+|++||.
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~~~GP---yIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVTDVGP---YIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhcccCC---chhhhhhccccHHHhhcccccceeeeH
Confidence            34569999999999999999999865 654 5444443333 33333332   66679999999998874  79999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC---CCCCch-HHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS---PSGNDY-LAEVC  172 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~---~~~~~y-~~k~~  172 (328)
                      .+..  ....+.+-.....+|+.|..|+++.+++  ++. ++..-||.+.  ||+.+...-+.+.   .+..-| .+|..
T Consensus       118 SALL--SAvGE~NVpLA~~VNI~GvHNil~vAa~--~kL-~iFVPSTIGA--FGPtSPRNPTPdltIQRPRTIYGVSKVH  190 (366)
T KOG2774|consen  118 SALL--SAVGETNVPLALQVNIRGVHNILQVAAK--HKL-KVFVPSTIGA--FGPTSPRNPTPDLTIQRPRTIYGVSKVH  190 (366)
T ss_pred             HHHH--HHhcccCCceeeeecchhhhHHHHHHHH--cCe-eEeecccccc--cCCCCCCCCCCCeeeecCceeechhHHH
Confidence            7642  2334444456678999999999999999  444 3434455655  8876443222221   144567 99999


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcC---CCcchhhhHHHH--HHHcCCC--CCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGK---DGGALAKMIPLF--MMFAGGP--LGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~---~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      .|.+.+.+..++|+++-++|.+.+...   +++.....+..+  ....|+-  .-.+++..++.|.+|+.++++.++..+
T Consensus       191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~  270 (366)
T KOG2774|consen  191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAAD  270 (366)
T ss_pred             HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCC
Confidence            999999999999999999998888764   444443334333  2223332  256788899999999999999999876


Q ss_pred             C---CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHH-HHCCCCcccccHHH
Q 020254          246 S---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKD  321 (328)
Q Consensus       246 ~---~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~p~~~~~~~  321 (328)
                      .   ...+||+++ -.+|..|+++++.+....-. +..... .+....+.     +.+.++.+.+ +++.|+-++. +..
T Consensus       271 ~~~lkrr~ynvt~-~sftpee~~~~~~~~~p~~~-i~y~~~-srq~iad~-----wp~~~dds~ar~~wh~~h~~~-l~~  341 (366)
T KOG2774|consen  271 SQSLKRRTYNVTG-FSFTPEEIADAIRRVMPGFE-IDYDIC-TRQSIADS-----WPMSLDDSEARTEWHEKHSLH-LLS  341 (366)
T ss_pred             HHHhhhheeeece-eccCHHHHHHHHHhhCCCce-eecccc-hhhhhhhh-----cccccCchhHhhHHHHhhhhh-HHH
Confidence            5   345999976 55899999999998764311 111111 11111221     3344444444 5678887774 665


Q ss_pred             HHHHh
Q 020254          322 ALKAI  326 (328)
Q Consensus       322 ~l~~~  326 (328)
                      .+.-+
T Consensus       342 ~i~~~  346 (366)
T KOG2774|consen  342 IISTV  346 (366)
T ss_pred             HHHHH
Confidence            55443

>PRK09186 flagellin modification protein A; Provisional

Probab=99.79  E-value=6.5e-18  Score=142.38  Aligned_cols=221  Identities=15%  Similarity=0.088  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CC-ccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KK-TRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~-~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.|+|+||||+|+||+++++.|+++|++|++++|++.+.......     .. ...+..+|+.|++++.++++       
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            347899999999999999999999999999999987653222110     00 01133579999988877765       


Q ss_pred             CCcEEEECCCCCCC------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 GSTAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      ++|+|||+|+....      .....+.....++.|+.++..+++++...  +.+.+++|++||...  +..... ...+.
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~-~~~~~  159 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYG--VVAPKF-EIYEG  159 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhh--hccccc-hhccc
Confidence            38999999974311      12334566778889998877666655432  145679999999664  322111 11222


Q ss_pred             CCC--CCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          161 SPS--GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       161 ~~~--~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      .+.  ...| .+|...+.....++.   ..++++++++||.++++...   .+...+.  ...+      ...+++++|+
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~---~~~~~~~--~~~~------~~~~~~~~dv  228 (256)
T PRK09186        160 TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE---AFLNAYK--KCCN------GKGMLDPDDI  228 (256)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH---HHHHHHH--hcCC------ccCCCCHHHh
Confidence            222  2246 667666666544433   24899999999998865421   1211111  1111      1247899999


Q ss_pred             HHHHHHHhhCCC--CCc-eEEecCC
Q 020254          235 VNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      |++++.++.+..  ..| .+.+.+|
T Consensus       229 a~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        229 CGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             hhhHhheeccccccccCceEEecCC
Confidence            999999997643  234 6666555

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6e-18  Score=141.61  Aligned_cols=218  Identities=18%  Similarity=0.119  Sum_probs=146.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~   98 (328)
                      ..++++||||+|+||+++++.|+++|++|++++|++++......... .....+|+.+.+.+.++++   ++|+|||+++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG-CEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            34789999999999999999999999999999998765433321111 1134578888888877765   5899999999


Q ss_pred             CCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254           99 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus        99 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      .....   .......+..+..|+.++..+++++.+.  ..+ .+++|++||...  +...         +....| .+|.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~y~~sK~  155 (245)
T PRK07060         87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAA--LVGL---------PDHLAYCASKA  155 (245)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHH--cCCC---------CCCcHhHHHHH
Confidence            74321   2334567778889999999999888752  122 368999999765  3321         122456 6777


Q ss_pred             HHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC-
Q 020254          172 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  246 (328)
Q Consensus       172 ~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  246 (328)
                      ..+.....+...   .+++++.+|||.++++.... ..............+      ...+++++|++++++.++..+. 
T Consensus       156 a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        156 ALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIP------LGRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHcCcccC
Confidence            666655555432   47999999999999885311 111000001111111      2347999999999999997654 


Q ss_pred             --CCceEEecCCC
Q 020254          247 --YRGVINGTAPN  257 (328)
Q Consensus       247 --~~g~~~i~~~~  257 (328)
                        .+.++++.+|.
T Consensus       230 ~~~G~~~~~~~g~  242 (245)
T PRK07060        230 MVSGVSLPVDGGY  242 (245)
T ss_pred             CccCcEEeECCCc
Confidence              23477776653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=5.2e-18  Score=142.45  Aligned_cols=220  Identities=13%  Similarity=0.025  Sum_probs=142.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .++++||||+|+||++++++|+++|++|+++ +|+.....+...    ......+..+|+.|++++.++++       ++
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL   83 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999998764 666543322111    11111234579999888776664       58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||....   .....+.....+++|+.++..+++++.+.  ..+.+++|++||...  +..         .+...
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~  152 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGS--IRY---------LENYT  152 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh--ccC---------CCCcc
Confidence            999999986432   22334555667889999999998888753  134568999999654  221         12234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....+..+   .++++++++||.+..+...................     ....+++++|++++++.+
T Consensus       153 ~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~~  227 (250)
T PRK08063        153 TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT-----PAGRMVEPEDVANAVLFL  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC-----CCCCCcCHHHHHHHHHHH
Confidence            56 6777666665544432   58999999999998764211111111111111110     112368999999999999


Q ss_pred             hhCCC---CCceEEecCCCc
Q 020254          242 LSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~~  258 (328)
                      +..+.   .+..+++.++..
T Consensus       228 ~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        228 CSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             cCchhcCccCCEEEECCCee
Confidence            87643   244888877653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.79  E-value=7.1e-18  Score=141.60  Aligned_cols=216  Identities=15%  Similarity=0.068  Sum_probs=143.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +++||||||+|+||++++++|+++|++|++++|+.........    ......+..+|+.|.++++++++       ++|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998755332211    01111244678888888776654       689


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|||+++.....   .......+..++.|+.++.++++++...  ..+.++++++||.+.  ++...         ....
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~--~~~~~---------~~~~  151 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAA--RVGSS---------GEAV  151 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhh--ccCCC---------CCch
Confidence            999999864221   2334555778999999999988877531  145678999999876  54322         2234


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-------hhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      | .+|...+.....++.+   .+++++++|||.++++.....       ..+...+  ....+.      ..+...+|+|
T Consensus       152 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~dva  223 (250)
T TIGR03206       152 YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAF--TRAIPL------GRLGQPDDLP  223 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHH--HhcCCc------cCCcCHHHHH
Confidence            6 6665554444444332   389999999999998742111       0111111  111121      1246789999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCC
Q 020254          236 NLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++..++..+.   .+.++++.++.
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       224 GAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHHcCcccCCCcCcEEEeCCCc
Confidence            99999887643   33488887663

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.1e-18  Score=144.11  Aligned_cols=214  Identities=16%  Similarity=0.124  Sum_probs=139.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~v   93 (328)
                      ++++|+||||+|+||+++++.|+++|++|++++|++.....+....  .....+|+.|.++++++++        ++|+|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~--~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEG--LEAFQLDYAEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--ceEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence            4568999999999999999999999999999999876544332211  1144579998887765543        57999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhh----HHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||.....   ....+..+..+++|+.+    ++.+++.+++  .+..++|++||...  +..         .+....
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~  147 (277)
T PRK05993         81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK--QGQGRIVQCSSILG--LVP---------MKYRGA  147 (277)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh--cCCCEEEEECChhh--cCC---------CCccch
Confidence            9999864332   23445667889999998    5566666666  56778999999654  321         123346


Q ss_pred             h-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhHH---------------HHHHHcCCCCCCCCccc
Q 020254          167 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIP---------------LFMMFAGGPLGSGQQWF  226 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~---------------~~~~~~~~~~~~~~~~~  226 (328)
                      | .+|...+.....+..   ..|+++++++||.+-.+-.... ..+..               ........    .....
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  223 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGG----GSKSR  223 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhh----hhccc
Confidence            7 777777766554432   3589999999999876632110 00000               00000000    00011


Q ss_pred             ccccHHHHHHHHHHHhhCCCCCceEEec
Q 020254          227 SWIHLDDIVNLIYEALSNPSYRGVINGT  254 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~~~g~~~i~  254 (328)
                      ..+.++++|+.++.++.++...-.|.++
T Consensus       224 ~~~~~~~va~~i~~a~~~~~~~~~~~~~  251 (277)
T PRK05993        224 FKLGPEAVYAVLLHALTAPRPRPHYRVT  251 (277)
T ss_pred             cCCCHHHHHHHHHHHHcCCCCCCeeeeC
Confidence            2467899999999999876533345443

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.1e-17  Score=140.43  Aligned_cols=217  Identities=12%  Similarity=0.070  Sum_probs=141.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      ++++|+||||+|+||++++++|+++|++|++++|++........    ..+..+|+.|+++++++++       ++|+||
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG----VELLELDVTDDASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCC----CeeEEeecCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            34689999999999999999999999999999998755433211    1255689999998887775       479999


Q ss_pred             ECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||.....   ....+.....+++|+.++..+++++...  +.+.+++|++||...  +..         .+....| .
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~~  147 (270)
T PRK06179         79 NNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLG--FLP---------APYMALYAA  147 (270)
T ss_pred             ECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccc--cCC---------CCCccHHHH
Confidence            999974322   2345667888999999988888875321  156789999999754  332         1223456 6


Q ss_pred             HHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh---hhHHHHHHHcC-CCCCCCCcccccccHHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA---KMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       169 ~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      +|...+.....+..   ..|+++++++||.+.++......   ........... ...............+|+++.++.+
T Consensus       148 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~  227 (270)
T PRK06179        148 SKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKA  227 (270)
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence            67666655444332   25899999999999887421110   00000000000 0000000112246789999999999


Q ss_pred             hhCCCCCceEEe
Q 020254          242 LSNPSYRGVING  253 (328)
Q Consensus       242 ~~~~~~~g~~~i  253 (328)
                      +..+.....|..
T Consensus       228 ~~~~~~~~~~~~  239 (270)
T PRK06179        228 ALGPWPKMRYTA  239 (270)
T ss_pred             HcCCCCCeeEec
Confidence            987653345544

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.3e-18  Score=142.64  Aligned_cols=219  Identities=15%  Similarity=0.139  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhc-------CCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI-------QGS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~-------~~~   90 (328)
                      +.|+|+||||+|+||++++++|+++|++|++++|++.........    ........+|+.|.++++.++       .++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            347899999999999999999999999999999987543322111    111124568998888776655       368


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+|+....    .....+.++..++.|+.++..+++++... ....+++|++||...  +.+.         +..+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~--~~~~---------~~~~  152 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL--RHSQ---------PKYG  152 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh--ccCC---------CCcc
Confidence            999999986322    13445778889999999999999998752 112358999999765  3211         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhh--------HHHHHH-HcCCCCCCCCcccccccH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM--------IPLFMM-FAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~--------~~~~~~-~~~~~~~~~~~~~~~i~v  231 (328)
                      .| .+|...+.....+..+   .+++++++|||.++++..... ...        -..... ....+      ...+.++
T Consensus       153 ~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  226 (258)
T PRK07890        153 AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSD------LKRLPTD  226 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCC------ccccCCH
Confidence            56 6777666666555543   489999999999999852110 000        000100 11111      2236789


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +|++++++.++....  ..| ++.+.++.
T Consensus       227 ~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        227 DEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            999999999887532  233 55565553

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=140.60  Aligned_cols=224  Identities=18%  Similarity=0.150  Sum_probs=146.1

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCChhhHhhcC----
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      +++.++|+++||||+|+||++++++|+++|++|+++.++... .....    ..........+|+.|.+++.++++    
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            344556799999999999999999999999999888775432 11111    001111134578988888776653    


Q ss_pred             ---CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCC--CCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 ---GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 ---~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                         ++|+|||+||....   .....+.++..+++|+.++..+++++....  ....++++++|...  +...        
T Consensus        84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~--~~~~--------  153 (258)
T PRK09134         84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV--WNLN--------  153 (258)
T ss_pred             HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh--cCCC--------
Confidence               57999999986422   233456678889999999999998877631  23356777777544  3321        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                       |....| .+|...+.....+..+  .++.+++++||.+..........+.   ......+.+      ...+++|+|++
T Consensus       154 -p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~------~~~~~~d~a~~  223 (258)
T PRK09134        154 -PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFA---RQHAATPLG------RGSTPEEIAAA  223 (258)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHH---HHHhcCCCC------CCcCHHHHHHH
Confidence             122357 7776666665555433  2489999999998765321111111   111122221      24779999999


Q ss_pred             HHHHhhCCCCCc-eEEecCCCccCH
Q 020254          238 IYEALSNPSYRG-VINGTAPNPVRL  261 (328)
Q Consensus       238 ~~~~~~~~~~~g-~~~i~~~~~~~~  261 (328)
                      ++.+++.+...| .|++.++..+++
T Consensus       224 ~~~~~~~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        224 VRYLLDAPSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             HHHHhcCCCcCCCEEEECCCeeccc
Confidence            999998765445 888888775554

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.2e-18  Score=143.14  Aligned_cols=219  Identities=13%  Similarity=0.056  Sum_probs=143.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+..........   ........+|+.|++++.++++       ++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            346899999999999999999999999999999987543322111   1111244679999888876653       689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|||+++....   .....+..+..++.|+.++..+.+++...  ..+.++++++||.+.. ++.          +..+.
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~-~~~----------~~~~~  152 (252)
T PRK06138         84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLAL-AGG----------RGRAA  152 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhc-cCC----------CCccH
Confidence            99999996432   22345666778999999987766655321  1456789999997541 332          12345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhh--HHHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM--IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      | .+|...+.....+..+   .+++++++|||.++++..... ...  .... .....     ......+++++|+++++
T Consensus       153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~a~~~  227 (252)
T PRK06138        153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRA-----RHPMNRFGTAEEVAQAA  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHh-----cCCCCCCcCHHHHHHHH
Confidence            6 6776666665555433   389999999999988742111 000  0000 00100     01112378999999999


Q ss_pred             HHHhhCCC--CCc-eEEecCC
Q 020254          239 YEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +.++..+.  ..| .+.+.++
T Consensus       228 ~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        228 LFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHcCchhcCccCCEEEECCC
Confidence            99988754  234 5666554

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3e-17  Score=136.40  Aligned_cols=210  Identities=19%  Similarity=0.118  Sum_probs=140.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC------CCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~   96 (328)
                      .|+|+||||+|+||++++++|+++|++|++++|++....  ..     .+..+|+.|.+++.++++      ++|+|||+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--~~-----~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF--PG-----ELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc--Cc-----eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            368999999999999999999999999999999876521  11     145689999988776664      68999999


Q ss_pred             CCCCCCCC---CChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           97 AGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        97 a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      ++......   ...+.....++.|+.++..+.+++...  ..+.+++|++||...  |+..          ....| .+|
T Consensus        76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~----------~~~~Y~~sK  143 (234)
T PRK07577         76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI--FGAL----------DRTSYSAAK  143 (234)
T ss_pred             CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc--cCCC----------CchHHHHHH
Confidence            99743322   234566778899999987776665431  145678999999875  6532          22456 666


Q ss_pred             HHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          171 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       171 ~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ...+.....++.   ..++.++++|||.+..+............  ......+.      ..+..++|+|.+++.++..+
T Consensus       144 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        144 SALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM------RRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC------CCCcCHHHHHHHHHHHhCcc
Confidence            665554443322   24899999999999876421110000000  11111111      12457899999999999765


Q ss_pred             C--CCc-eEEecCCC
Q 020254          246 S--YRG-VINGTAPN  257 (328)
Q Consensus       246 ~--~~g-~~~i~~~~  257 (328)
                      .  ..| .+.+.++.
T Consensus       218 ~~~~~g~~~~~~g~~  232 (234)
T PRK07577        218 AGFITGQVLGVDGGG  232 (234)
T ss_pred             cCCccceEEEecCCc
Confidence            3  234 77776553

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2e-17  Score=138.81  Aligned_cols=217  Identities=13%  Similarity=0.098  Sum_probs=144.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc-------CCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~   90 (328)
                      ..++|+||||+|+||+++++.|+++|++|++++|++.+......    .........+|+.|.+++++++       .++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45899999999999999999999999999999988664332211    1111123457888888877666       368


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||++|....   .....+..+..+..|+.++.++++++...  +.+..++|++||...  +...         +...
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  154 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA--LWGA---------PKLG  154 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh--ccCC---------CCcc
Confidence            999999996432   22344566778889999999998887642  133558999999765  3221         1223


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh--hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...+.....+..+   .++.+++++||.+.++......  .+...+  ...      .....+++++|++++++
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~dva~~~~  226 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYY--LKG------RALERLQVPDDVAGAVL  226 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHH--Hhc------CCCCCCCCHHHHHHHHH
Confidence            46 6666666555444332   4899999999998776432111  111111  111      12234789999999999


Q ss_pred             HHhhCCC---CCceEEecCCC
Q 020254          240 EALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~  257 (328)
                      .++..+.   .+..+++.++.
T Consensus       227 ~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        227 FLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHhCccccCccCcEEEECCCc
Confidence            9997643   33477777764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.78  E-value=1.7e-17  Score=139.54  Aligned_cols=219  Identities=14%  Similarity=-0.031  Sum_probs=142.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~   95 (328)
                      .+++|||||+|+||++++++|+++|++|++++|+.....     ........+|+.+.+++.++++       ++|+|||
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE-----DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            478999999999999999999999999999999861111     1111144679999888877664       4799999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      +++....   .....+.+...++.|+.++..+++++...  ..+..++|++||...  ...         .+....| .+
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~~~~~~Y~~s  151 (252)
T PRK08220         83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA--HVP---------RIGMAAYGAS  151 (252)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh--ccC---------CCCCchhHHH
Confidence            9997432   12345677888999999999999887542  134457999998764  221         1223456 66


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh--hhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      |...+.....+..+   .++++++++||.++++......  ...... ................+++++|+|++++.++.
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence            76666665555443   5899999999999988531110  000000 00000000011122457999999999999987


Q ss_pred             CCC---CCceEEecCCC
Q 020254          244 NPS---YRGVINGTAPN  257 (328)
Q Consensus       244 ~~~---~~g~~~i~~~~  257 (328)
                      ...   .+.+..+.+|.
T Consensus       232 ~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        232 DLASHITLQDIVVDGGA  248 (252)
T ss_pred             chhcCccCcEEEECCCe
Confidence            543   23366666553

>PLN02253 xanthoxin dehydrogenase

Probab=99.77  E-value=1.4e-17  Score=142.23  Aligned_cols=224  Identities=12%  Similarity=0.019  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+..........   ........+|+.|.+++.++++       ++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999876543222111   1111245689999988877664       689


Q ss_pred             EEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|||+||....     .+...+.++..+++|+.++.++++++.+.  .....+++++||.... ++..          ..
T Consensus        97 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~-~~~~----------~~  165 (280)
T PLN02253         97 IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA-IGGL----------GP  165 (280)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc-ccCC----------CC
Confidence            99999996422     23345677899999999999988877642  1234578888886542 3321          12


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-------hhhhHHHHH-HHc-CCCCCCCCcccccccH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-------LAKMIPLFM-MFA-GGPLGSGQQWFSWIHL  231 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~-~~~-~~~~~~~~~~~~~i~v  231 (328)
                      ..| .+|...+.....++.+   .++.+.+++||.+.++....       .......+. ... ..++     ....+++
T Consensus       166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~  240 (280)
T PLN02253        166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL-----KGVELTV  240 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC-----cCCCCCH
Confidence            357 7787777777665544   38999999999998763210       001111110 000 1111     1224789


Q ss_pred             HHHHHHHHHHhhCCC---CCceEEecCCCccCH
Q 020254          232 DDIVNLIYEALSNPS---YRGVINGTAPNPVRL  261 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~~  261 (328)
                      +|++++++.++....   .+..+++.+|...+.
T Consensus       241 ~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             HHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence            999999999987543   234788877754433

>PRK06194 hypothetical protein; Provisional

Probab=99.77  E-value=8.9e-18  Score=143.95  Aligned_cols=217  Identities=11%  Similarity=-0.036  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+++||||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.++++++++       ++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999997654332211    11111134679999888877765       57


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC------CCcEEEEecccceeecCCCcccccC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG------VRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~------~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                      |+|||+||.....   ....+.+...+++|+.++.++++++...  ...      ..++|++||...  +...       
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~-------  155 (287)
T PRK06194         85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAG--LLAP-------  155 (287)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh--ccCC-------
Confidence            9999999975432   2345667788999999999977774321  012      257999999765  4322       


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCccccccc
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIH  230 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~  230 (328)
                        +....| .+|...+.....+..+     .++++.++.||.+..+-..          ...+.+   .+.+.+.+++++
T Consensus       156 --~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~----------~~~~~~~~~~~~~~~~~~~~~  223 (287)
T PRK06194        156 --PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ----------SERNRPADLANTAPPTRSQLI  223 (287)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc----------ccccCchhcccCccccchhhH
Confidence              223457 7777766666554433     2466777777666443210          001111   134456677778


Q ss_pred             HHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCC
Q 020254          231 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGR  274 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~  274 (328)
                      ++|++..+....               .++..|+++.+.+.+..
T Consensus       224 ~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~~  252 (287)
T PRK06194        224 AQAMSQKAVGSG---------------KVTAEEVAQLVFDAIRA  252 (287)
T ss_pred             HHHHHHhhhhcc---------------CCCHHHHHHHHHHHHHc
Confidence            877776653221               16777777777776643

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.8e-17  Score=139.93  Aligned_cols=219  Identities=11%  Similarity=0.020  Sum_probs=145.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.|+||||||+|+||.+++++|+++|++|++++|+.... ...    ........+..+|+.+.+.+.++++       +
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999999999976431 111    1111111244678888887776653       6


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|+|||+|+....    .....+.+...++.|+.++.++++++........++|++||...  |....         ...
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~--~~~~~---------~~~  193 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG--YEGNE---------TLI  193 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc--cCCCC---------Ccc
Confidence            8999999986322    12344567888999999999999998763112358999999876  54321         123


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....++.+   .|++++.++||.++.+...... .-.......     .......+.+++|+|++++.+
T Consensus       194 ~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        194 DYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFG-----SNTPMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHH-----hcCCcCCCcCHHHHHHHHHHH
Confidence            46 6666666655555443   3899999999999887421110 000111111     111123478999999999999


Q ss_pred             hhCCC--CCc-eEEecCCC
Q 020254          242 LSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       242 ~~~~~--~~g-~~~i~~~~  257 (328)
                      +....  ..| ++++.++.
T Consensus       268 l~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             cCcccCCccCcEEEeCCCc
Confidence            88653  234 78887764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.6e-17  Score=138.49  Aligned_cols=196  Identities=15%  Similarity=0.131  Sum_probs=137.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC----CCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~   98 (328)
                      |++++||||+|+||.+++++|+++|++|++++|++....++........+..+|+.|.++++++++    .+|.++|+||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            468999999999999999999999999999999876544332211112245689999999888775    3689999998


Q ss_pred             CCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHH
Q 020254           99 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  174 (328)
Q Consensus        99 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  174 (328)
                      .....   ....+..+..+++|+.++.++++++........++|++||... .++.          +....| .+|...+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~-~~~~----------~~~~~Y~asK~a~~  149 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIAS-ELAL----------PRAEAYGASKAAVA  149 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhh-ccCC----------CCCchhhHHHHHHH
Confidence            53221   1344566788999999999999998863123357888888643 1321          223356 6777666


Q ss_pred             HHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          175 WEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       175 ~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .....+.   ...+++++++|||.++++.....             ....    ...+..+|+++.++..++...
T Consensus       150 ~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-------------~~~~----~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        150 YFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-------------TFAM----PMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-------------CCCC----CcccCHHHHHHHHHHHHhcCC
Confidence            6655444   23589999999999988742210             0000    114789999999999998753

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3e-17  Score=137.69  Aligned_cols=218  Identities=15%  Similarity=0.101  Sum_probs=140.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhc-------CCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~v   93 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|+.....+.... .....+..+|+.|.+++..++       .++|+|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            347999999999999999999999999999999986543322111 111113457888777655443       368999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      ||+||....   ..+..+.++..++.|+.++..+++++........+++++||... .|+..          ....| .+
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~-~~~~~----------~~~~Y~~s  153 (249)
T PRK06500         85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINA-HIGMP----------NSSVYAAS  153 (249)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHh-ccCCC----------CccHHHHH
Confidence            999986432   23455778889999999999999999752112346777777543 25522          23457 77


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc---hhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      |...+.....++.+   .++++.++|||.++++....   ........  ......++.      -+..++|+++++..+
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~va~~~~~l  227 (249)
T PRK06500        154 KAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG------RFGTPEEIAKAVLYL  227 (249)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC------CCcCHHHHHHHHHHH
Confidence            77776666544432   48999999999999873210   00111111  111122221      246889999999998


Q ss_pred             hhCCC---CCceEEecCC
Q 020254          242 LSNPS---YRGVINGTAP  256 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~  256 (328)
                      +....   .+..+.+.++
T Consensus       228 ~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        228 ASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             cCccccCccCCeEEECCC
Confidence            87533   2235555444

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.77  E-value=1.3e-17  Score=139.83  Aligned_cols=206  Identities=16%  Similarity=0.143  Sum_probs=134.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN   95 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~   95 (328)
                      |+|+||||+|+||.++++.|+++|++|++++|++.+....... ........+|+.|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899999999999999999999999999999987654332211 0011144679988887776553       6999999


Q ss_pred             CCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           96 LAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        96 ~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      +||....    .....+.....++.|+.++..++.++.+.  +.+.+++|++||...  +..         .+....| .
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~~  149 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG--SWP---------YAGGNVYGA  149 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCccc--CCC---------CCCCchhHH
Confidence            9986321    22345677888999999966666655421  145678999999764  221         1223456 6


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      +|...+.....+..+   .++.+++++||.+.|+..... .+....... ... ..   ...++.++|+|++++.++..+
T Consensus       150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~-~~~~~~~~~-~~~-~~---~~~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV-RFKGDDGKA-EKT-YQ---NTVALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh-hccCcHHHH-Hhh-cc---ccCCCCHHHHHHHHHHHhcCC
Confidence            676666655444432   479999999999987642110 000000000 000 00   123578999999999999765


Q ss_pred             C
Q 020254          246 S  246 (328)
Q Consensus       246 ~  246 (328)
                      .
T Consensus       224 ~  224 (248)
T PRK10538        224 A  224 (248)
T ss_pred             C
Confidence            4

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.5e-17  Score=137.19  Aligned_cols=219  Identities=15%  Similarity=0.025  Sum_probs=144.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..++|+||||+|+||.++++.|+++|++|++++|+.......... ........+|+.+++++.++++       ++|+|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            357999999999999999999999999999999986532111110 0001134578988887776653       67999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||++|.....   ....+..+..++.|+.++..+++++...  ..+.+++|++||.... ++.          +....| 
T Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y~  162 (255)
T PRK06841         94 VNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV-VAL----------ERHVAYC  162 (255)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc-cCC----------CCCchHH
Confidence            9999974321   2334566788999999999999887642  1346789999997641 332          122356 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|...+.....++.+   .++.+..++||.+..+.......-..........+      ...+.+++|++++++.++..
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~  236 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP------AGRFAYPEEIAAAALFLASD  236 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCc
Confidence            6676655555444443   48999999999998774211100000011111222      12478999999999999976


Q ss_pred             CC--CCc-eEEecCCC
Q 020254          245 PS--YRG-VINGTAPN  257 (328)
Q Consensus       245 ~~--~~g-~~~i~~~~  257 (328)
                      +.  ..| ++.+.++.
T Consensus       237 ~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        237 AAAMITGENLVIDGGY  252 (255)
T ss_pred             cccCccCCEEEECCCc
Confidence            43  334 77776664

>PRK05717 oxidoreductase; Validated

Probab=99.77  E-value=4.6e-17  Score=137.07  Aligned_cols=219  Identities=16%  Similarity=0.095  Sum_probs=143.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .+.++|+||||+|+||+++++.|+++|++|++++|+..+....... .....+..+|+.+.+++.++++       ++|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3457899999999999999999999999999998876543322111 1111244689998887755442       5899


Q ss_pred             EEECCCCCCCC-----CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      |||+||.....     ....+.++..++.|+.++.++++++.+. .....++|++||...  +...         +....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~--~~~~---------~~~~~  156 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRA--RQSE---------PDTEA  156 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhh--cCCC---------CCCcc
Confidence            99999974221     2345667889999999999999999642 123357899988765  3211         12245


Q ss_pred             h-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHc-CCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|...+.....+..+.  ++++.+++||.+.++..... ...+...... ..+.      ..+.+++|++.++..++
T Consensus       157 Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~va~~~~~l~  229 (255)
T PRK05717        157 YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR-RAEPLSEADHAQHPA------GRVGTVEDVAAMVAWLL  229 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc-cchHHHHHHhhcCCC------CCCcCHHHHHHHHHHHc
Confidence            7 77777666665554433  58999999999998743211 0111111111 1111      23678999999999888


Q ss_pred             hCCC--CCc-eEEecCCC
Q 020254          243 SNPS--YRG-VINGTAPN  257 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~~  257 (328)
                      ....  ..| .+.+.++.
T Consensus       230 ~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        230 SRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             CchhcCccCcEEEECCCc
Confidence            6532  234 67665543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.77  E-value=5.8e-17  Score=135.82  Aligned_cols=217  Identities=15%  Similarity=0.120  Sum_probs=138.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+++|+||||||+||++++++|+++|++|++++|+..+. ..    ............+|+.+.+.+.++++       +
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            447899999999999999999999999998888876531 11    11111111134568888887766553       6


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+++....   .....+..+..+..|+.++.++++++...  ..+.++++++||... .++..          ..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~-~~~~~----------~~  152 (248)
T PRK05557         84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG-LMGNP----------GQ  152 (248)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc-CcCCC----------CC
Confidence            8999999986432   23345667788899999999998888752  134567999998643 24422          12


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....+..   ..++.++++|||.+.++..... ..+..  ......+      ...+.+++|+++++.
T Consensus       153 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~va~~~~  224 (248)
T PRK05557        153 ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKE--AILAQIP------LGRLGQPEEIASAVA  224 (248)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHH--HHHhcCC------CCCCcCHHHHHHHHH
Confidence            345 555544433322221   2489999999998865532211 11111  1111111      123578999999998


Q ss_pred             HHhhCCC--CC-ceEEecCCC
Q 020254          240 EALSNPS--YR-GVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~-g~~~i~~~~  257 (328)
                      .++....  .. ..|++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        225 FLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHcCcccCCccccEEEecCCc
Confidence            8876522  33 489987764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.77  E-value=4.8e-17  Score=136.40  Aligned_cols=218  Identities=13%  Similarity=0.064  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCChhhHhhc-------CCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~   92 (328)
                      +.++|+||||+|+||.+++++|+++|++|++++|+....  ..............+|+.+.+++.+++       .++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357899999999999999999999999999999875321  111111111124467999988877554       36899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +||+||....   .......++..++.|+.++..+++++.+.  ..+ ..++|++||...  |.+.         +..+.
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~~~  152 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS--FQGG---------IRVPS  152 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh--ccCC---------CCCch
Confidence            9999997432   22344667888999999999999887642  123 468999999876  5432         12345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-HHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      | .+|...+.....++.+   .++++++++||.+..+........... .......+      ...++.++|+|++++.+
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l  226 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIP------AGRWGTPDDIGGPAVFL  226 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCC------CCCCcCHHHHHHHHHHH
Confidence            7 7777766666555544   489999999999987742211000000 01111111      23578999999999999


Q ss_pred             hhCCC--CCc-eEEecCC
Q 020254          242 LSNPS--YRG-VINGTAP  256 (328)
Q Consensus       242 ~~~~~--~~g-~~~i~~~  256 (328)
                      +....  ..| ++.+.++
T Consensus       227 ~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       227 ASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             cCccccCcCCcEEEeCCC
Confidence            97533  345 4444443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.2e-17  Score=139.16  Aligned_cols=194  Identities=14%  Similarity=0.117  Sum_probs=135.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhcC-------CCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      +|+|+||||+|+||++++++|+++|++|++++|+...........   ....+..+|+.|.+++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            479999999999999999999999999999999865543322110   012245689999888876653       4799


Q ss_pred             EEECCCCCCCCC----CChhHHHHHHHhhhhhHHHHHHH----HhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           93 VVNLAGTPIGTR----WSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        93 vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +||++|......    ...+..+..+++|+.++..++++    +++  .+..++|++||... .++.          +..
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~--~~~~~iv~isS~~~-~~~~----------~~~  148 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA--ARRGTLVGIASVAG-VRGL----------PGA  148 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh--cCCCEEEEEechhh-cCCC----------CCC
Confidence            999999643211    33466788999999999887774    444  45678999998764 1331          223


Q ss_pred             Cch-HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+.   ...+++++++|||.+.++....             .....    -.++..+++++.++.
T Consensus       149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~----~~~~~~~~~a~~~~~  211 (257)
T PRK07024        149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------------NPYPM----PFLMDADRFAARAAR  211 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-------------CCCCC----CCccCHHHHHHHHHH
Confidence            457 77776666654443   2358999999999998773210             00000    113689999999999


Q ss_pred             HhhCCC
Q 020254          241 ALSNPS  246 (328)
Q Consensus       241 ~~~~~~  246 (328)
                      ++.+..
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            998643

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1e-16  Score=135.41  Aligned_cols=218  Identities=17%  Similarity=0.104  Sum_probs=143.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi   94 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|+......  ..   ..+..+|+.|.+.+.+++       .++|+||
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP--EG---VEFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcC--Cc---eeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35799999999999999999999999999999998654221  11   114568999888776544       3689999


Q ss_pred             ECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |+||....     .....+.++..+++|+.++..+.+++...  +.+..++|++||...  +...        .+....|
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~~~--------~~~~~~Y  152 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQR--RLPL--------PESTTAY  152 (260)
T ss_pred             ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccc--cCCC--------CCCcchh
Confidence            99985321     22455678888999999987776655431  134567999999765  3321        0123457


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhH-------HHH-----HHHcCCCCCCCCccccccc
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMI-------PLF-----MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~-------~~~-----~~~~~~~~~~~~~~~~~i~  230 (328)
                       .+|...+.....++.+   .++++.+++||.+.++..... ..+.       ...     ....+.|+      ..+..
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~  226 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL------GRPAE  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc------CCCCC
Confidence             6776666555544432   489999999999998753111 0000       000     00111121      22567


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++|++.++..++....   .+..+.+.++...+
T Consensus       227 ~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        227 PEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            8999999999987543   33488887776443

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.76  E-value=6.1e-17  Score=135.51  Aligned_cols=216  Identities=17%  Similarity=0.077  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++|+||||+|+||+++++.|+++|++|+++.|+.... ...    ........+..+|+.+.+++.++++       +
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999998887765321 111    1111111244578888888777664       6


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|+|||+||....   .....+..+..+++|+.++..+++++.+......++|++||...  +..         .+....
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~---------~~~~~~  152 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVI--ALP---------LPGYGP  152 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccc--cCC---------CCCCch
Confidence            8999999996432   23345567788999999999999888763123358999988654  221         123345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC--cchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG--GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      | .+|...+.....+..+   .++.+++++||.+-.+..  ........  ......++      ..+.+++|++++++.
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d~a~~~~~  224 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID--QLAGLAPL------ERLGTPEEIAAAVAF  224 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHH--HHHhcCCC------CCCCCHHHHHHHHHH
Confidence            6 6676666555544332   378999999998876531  11111111  11112222      125678999999999


Q ss_pred             HhhCCC--C-CceEEecCC
Q 020254          241 ALSNPS--Y-RGVINGTAP  256 (328)
Q Consensus       241 ~~~~~~--~-~g~~~i~~~  256 (328)
                      ++..+.  . +.++++.++
T Consensus       225 l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        225 LAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HcCccccCccccEEEeCCC
Confidence            987643  2 337777654

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=140.97  Aligned_cols=219  Identities=19%  Similarity=0.113  Sum_probs=143.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++... ...    ..........+|+.+.+++.++++       ++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            346899999999999999999999999999999987653 111    111111245689988888776664       68


Q ss_pred             cEEEECCCCCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           91 TAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        91 d~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |+|||+||....  .....+..+..++.|+.++..+.+++.+. ....++++++||.... ++          .+....|
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~----------~~~~~~Y  153 (258)
T PRK08628         85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL-TG----------QGGTSGY  153 (258)
T ss_pred             CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc-cC----------CCCCchh
Confidence            999999996322  12223667788999999999888877642 1234689999987651 22          1223467


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhH---HHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMI---PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                       .+|...+.....++.   ..+++++.++||.++++..... ..+.   ... ......+.+     ..++.++|+++++
T Consensus       154 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~dva~~~  228 (258)
T PRK08628        154 AAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLG-----HRMTTAEEIADTA  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcc-----ccCCCHHHHHHHH
Confidence             777777666655543   2489999999999998742110 0000   000 011111111     2368899999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++....  ..| .+.+.++.
T Consensus       229 ~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        229 VFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHhChhhccccCceEEecCCc
Confidence            99997643  334 66665553

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.4e-17  Score=136.36  Aligned_cols=210  Identities=15%  Similarity=0.121  Sum_probs=138.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+........   .......+|+.+.+++.+.++       ++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3478999999999999999999999999999999876543322110   101134568888887766554       689


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +|||+++.....   ....+.....++.|+.++..+++++.+. ..+.+++|++||...  +...         +....|
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~~---------~~~~~y  153 (237)
T PRK07326         85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG--TNFF---------AGGAAY  153 (237)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh--ccCC---------CCCchH
Confidence            999999864321   2344556788899999999988887642 124567999998754  3211         112345


Q ss_pred             -HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|...+.....+.   ...+++++++||+.+.++.......                ......+..+|++++++.++.
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~----------------~~~~~~~~~~d~a~~~~~~l~  217 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS----------------EKDAWKIQPEDIAQLVLDLLK  217 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc----------------hhhhccCCHHHHHHHHHHHHh
Confidence             55654444433322   2358999999999987764211100                000113789999999999998


Q ss_pred             CCC--CCceEEecCCCc
Q 020254          244 NPS--YRGVINGTAPNP  258 (328)
Q Consensus       244 ~~~--~~g~~~i~~~~~  258 (328)
                      .+.  ..+...+..+.+
T Consensus       218 ~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        218 MPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             CCccccccceEEecCCC
Confidence            765  334555554443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.76  E-value=4.9e-17  Score=122.52  Aligned_cols=206  Identities=17%  Similarity=0.169  Sum_probs=138.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |||.|+||||.+|++|++.++++||+|++++|++++.......    ...+.|+.|++.+.+.+.+.|+||...+..   
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~----~i~q~Difd~~~~a~~l~g~DaVIsA~~~~---   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV----TILQKDIFDLTSLASDLAGHDAVISAFGAG---   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc----eeecccccChhhhHhhhcCCceEEEeccCC---
Confidence            7899999999999999999999999999999999887654221    144679999999999999999999987652   


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch--HHHHHHHHHHHHhc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY--LAEVCREWEGTALK  181 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y--~~k~~~~~~~~~~~  181 (328)
                       +... ..    ........+++.++.  .++.|++.+..++.= |=......++... .+..|  .++...+.......
T Consensus        74 -~~~~-~~----~~~k~~~~li~~l~~--agv~RllVVGGAGSL-~id~g~rLvD~p~-fP~ey~~~A~~~ae~L~~Lr~  143 (211)
T COG2910          74 -ASDN-DE----LHSKSIEALIEALKG--AGVPRLLVVGGAGSL-EIDEGTRLVDTPD-FPAEYKPEALAQAEFLDSLRA  143 (211)
T ss_pred             -CCCh-hH----HHHHHHHHHHHHHhh--cCCeeEEEEcCccce-EEcCCceeecCCC-CchhHHHHHHHHHHHHHHHhh
Confidence             1111 11    223336677888887  688999998876641 3322222222222 22344  33333333333333


Q ss_pred             ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEe
Q 020254          182 VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVING  253 (328)
Q Consensus       182 ~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i  253 (328)
                       +..++|+.+-|+..|-|+....+..+      .+..+-....--+.|+..|.|-+++.-++++.+ +..|.+
T Consensus       144 -~~~l~WTfvSPaa~f~PGerTg~yrl------ggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv  209 (211)
T COG2910         144 -EKSLDWTFVSPAAFFEPGERTGNYRL------GGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTV  209 (211)
T ss_pred             -ccCcceEEeCcHHhcCCccccCceEe------ccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeee
Confidence             34699999999999999643221111      122221223335789999999999999999873 335544

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=2.8e-17  Score=137.08  Aligned_cols=199  Identities=15%  Similarity=0.086  Sum_probs=134.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++++||||+|+||.+++++|+++|++|++++|++.+......    ......+..+|+.+++++.++++       ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            45789999999999999999999999999999998754332211    11111134578888888777664       68


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+++.....   ....+..+..++.|+.++.++.+++...  +.+.+++|++||...  +...         +...
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~~~~---------~~~~  154 (239)
T PRK07666         86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAG--QKGA---------AVTS  154 (239)
T ss_pred             cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhh--ccCC---------CCCc
Confidence            9999999864322   2344666788999999998888877632  145678999999765  3221         1223


Q ss_pred             ch-HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....+.   ...+++++++|||.+.++.....           ..+...   ...++..+|+|+.++.+
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~~~---~~~~~~~~~~a~~~~~~  220 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GLTDGN---PDKVMQPEDLAEFIVAQ  220 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------cccccC---CCCCCCHHHHHHHHHHH
Confidence            45 55655444443332   22589999999999987742110           000011   12368899999999999


Q ss_pred             hhCC
Q 020254          242 LSNP  245 (328)
Q Consensus       242 ~~~~  245 (328)
                      +..+
T Consensus       221 l~~~  224 (239)
T PRK07666        221 LKLN  224 (239)
T ss_pred             HhCC
Confidence            9875

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.8e-17  Score=135.92  Aligned_cols=217  Identities=16%  Similarity=0.082  Sum_probs=138.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .++++||||+|+||.+++++|+++|++|++..++... ....    ........+..+|+.|.+++.++++       ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            3579999999999999999999999998877654322 1111    1111111244689999888877664       68


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-C-C---CCCcEEEEecccceeecCCCcccccCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E---GVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~---~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      |+|||+|+....    .....+.+...+++|+.++..+++++.+. . .   ...+++++||.... ++....       
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~-------  153 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR-LGSPGE-------  153 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-CCCCCC-------
Confidence            999999986422    12244566788999999999988877652 0 1   12368999997541 442210       


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                        ...| .+|...+.....+..+   .+++++++||+.++++...... ...... .....|+.      -+.+++|+++
T Consensus       154 --~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~------~~~~~~d~a~  224 (248)
T PRK06123        154 --YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMG------RGGTAEEVAR  224 (248)
T ss_pred             --ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCC------CCcCHHHHHH
Confidence              1247 7777666665544332   4899999999999998432110 001111 11122221      1347899999


Q ss_pred             HHHHHhhCCC---CCceEEecCC
Q 020254          237 LIYEALSNPS---YRGVINGTAP  256 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~  256 (328)
                      +++.++....   .+.+|++.++
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        225 AILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHhCccccCccCCEEeecCC
Confidence            9999887542   3348888765

>PRK06398 aldose dehydrogenase; Validated

Probab=99.76  E-value=1.4e-16  Score=134.26  Aligned_cols=212  Identities=11%  Similarity=0.022  Sum_probs=142.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.+++|||||+|+||.+++++|+++|++|++++|+......       .....+|+.|+++++++++       ++|+||
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND-------VDYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc-------eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34799999999999999999999999999999998654321       1145689999888776653       689999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....   .....+.++..+++|+.++..+++++.+.  +.+..++|++||...  +...         +....| .
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~~  146 (258)
T PRK06398         78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS--FAVT---------RNAAAYVT  146 (258)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchh--ccCC---------CCCchhhh
Confidence            99997432   23345667888999999999888877542  134578999999765  4321         233457 6


Q ss_pred             HHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcch---------hhhHHHHH-HHcCCCCCCCCcccccccHHHHHH
Q 020254          169 AEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL---------AKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +|...+.....++.+.  ++++.+++||.+-.+-....         ........ .....+      ...+..++|+|+
T Consensus       147 sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~eva~  220 (258)
T PRK06398        147 SKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHP------MKRVGKPEEVAY  220 (258)
T ss_pred             hHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCC------cCCCcCHHHHHH
Confidence            7777666665554432  48999999998876521100         00000000 001111      123578999999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +++.++....  ..| ++.+.+|.
T Consensus       221 ~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        221 VVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHcCcccCCCCCcEEEECCcc
Confidence            9999987543  344 66666654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.8e-17  Score=139.85  Aligned_cols=197  Identities=16%  Similarity=0.094  Sum_probs=132.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~   95 (328)
                      +++|+||||||.||++++++|+++|++|++++|++.................+|+.|++++.+++       .++|++||
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999987654332211111124467999988776554       36899999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      +||....   .....+.....+++|+.++..++.++...  ..+..++|++||...  +..         .+....| .+
T Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~as  153 (273)
T PRK07825         85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAG--KIP---------VPGMATYCAS  153 (273)
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccc--cCC---------CCCCcchHHH
Confidence            9997432   22344567788899999888877665431  146678999999764  321         1223456 55


Q ss_pred             HHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          170 EVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       170 k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      |.........+.   ...|+++++++|+.+-.+...             +.+   ......++.++|+|+.++.++.++.
T Consensus       154 Kaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~---~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        154 KHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG---GAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc---cccCCCCCCHHHHHHHHHHHHhCCC
Confidence            654433322221   235899999999987654210             000   0112347899999999999998754

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.76  E-value=9.6e-17  Score=134.91  Aligned_cols=218  Identities=19%  Similarity=0.101  Sum_probs=144.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|+......    .....+..+|+.+.++++++++       ++|+||
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD----GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhc----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45799999999999999999999999999999998754111    1111144679988887776663       579999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      |+||....   .+...+.++..+++|+.++..+++++...   ..+..++|++||...  +...         +....| 
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~Y~  149 (252)
T PRK07856         81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG--RRPS---------PGTAAYG  149 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc--CCCC---------CCCchhH
Confidence            99986432   23445667889999999999999987642   123468999999764  3211         223456 


Q ss_pred             HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|...+.....+..+.  .+.+..++||.+..+.......-.... ......|.      ..+..++|++++++.++..
T Consensus       150 ~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~va~~~~~L~~~  223 (252)
T PRK07856        150 AAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL------GRLATPADIAWACLFLASD  223 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC------CCCcCHHHHHHHHHHHcCc
Confidence            67776666665554432  389999999999876421100000111 11111221      2256789999999999875


Q ss_pred             CC--CCc-eEEecCCCccC
Q 020254          245 PS--YRG-VINGTAPNPVR  260 (328)
Q Consensus       245 ~~--~~g-~~~i~~~~~~~  260 (328)
                      ..  ..| .+.+.+|...+
T Consensus       224 ~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        224 LASYVSGANLEVHGGGERP  242 (252)
T ss_pred             ccCCccCCEEEECCCcchH
Confidence            43  344 77777765443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.75  E-value=2.5e-17  Score=134.91  Aligned_cols=205  Identities=15%  Similarity=0.089  Sum_probs=142.4

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-----ccCceeecCChhhHhhcC------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-----FFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~------   88 (328)
                      +.++++++|||||+.||..++++|.++|++|+++.|+.++..++.......     ....+|+.++++++.+..      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            345679999999999999999999999999999999998766554332221     244678999888876653      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                       .+|++|||||....   .+...+..++++++|+.+.-.+..++...  ..+..++|.++|.+.  |-+.         |
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag--~~p~---------p  151 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAG--LIPT---------P  151 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhh--cCCC---------c
Confidence             58999999997544   34455677889999999876666655431  256778999999876  4422         2


Q ss_pred             CCCch-HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ....| .+|...-...+.+.   ...|+.++.|.||.+.......           .+.........+-++..+|+|+..
T Consensus       152 ~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----------~~~~~~~~~~~~~~~~~~~va~~~  220 (265)
T COG0300         152 YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----------KGSDVYLLSPGELVLSPEDVAEAA  220 (265)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----------cccccccccchhhccCHHHHHHHH
Confidence            23445 55544333322222   2248999999999988775320           111111111234578999999999


Q ss_pred             HHHhhCCC
Q 020254          239 YEALSNPS  246 (328)
Q Consensus       239 ~~~~~~~~  246 (328)
                      +..+....
T Consensus       221 ~~~l~~~k  228 (265)
T COG0300         221 LKALEKGK  228 (265)
T ss_pred             HHHHhcCC
Confidence            99999854

>PRK07985 oxidoreductase; Provisional

Probab=99.75  E-value=1.1e-16  Score=137.27  Aligned_cols=216  Identities=14%  Similarity=0.060  Sum_probs=144.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc--ccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++++||||+|+||.++++.|+++|++|++.+|+...  ...+.    ..........+|+.|.+++.++++       +
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  128 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG  128 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999988765432  11111    111111134579988887765543       5


Q ss_pred             CcEEEECCCCCC----CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|++||+|+...    ......+++...+++|+.++..+++++........++|++||...  +...         +...
T Consensus       129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~--~~~~---------~~~~  197 (294)
T PRK07985        129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA--YQPS---------PHLL  197 (294)
T ss_pred             CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh--ccCC---------CCcc
Confidence            899999998632    123456778899999999999999988763112358999999876  5422         1224


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc---hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      .| .+|...+.....++.+   .|+++.+++||.+.++....   .......  .....++      ..+..++|+|.++
T Consensus       198 ~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~------~r~~~pedva~~~  269 (294)
T PRK07985        198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ--FGQQTPM------KRAGQPAELAPVY  269 (294)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHH--HhccCCC------CCCCCHHHHHHHH
Confidence            57 7777766666555543   48999999999999884211   0111111  1111121      1256799999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++....  ..| ++.+.+|.
T Consensus       270 ~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        270 VYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HhhhChhcCCccccEEeeCCCe
Confidence            99987643  234 77776654

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.6e-17  Score=137.28  Aligned_cols=210  Identities=14%  Similarity=0.100  Sum_probs=131.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-CCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a   97 (328)
                      +++||||||+|+||++++++|++.|++|++++|++........    .........+|+.|++++.+++. ++|+|||+|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            4689999999999999999999999999999997654322110    00011244579999999988886 899999999


Q ss_pred             CCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           98 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        98 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      +....   .....+..+..+++|+.++..+.+.+    .+  .+.+++|++||...  +..         .+....| .+
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~~SS~~~--~~~---------~~~~~~Y~~s  148 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA--RGKGKVVFTSSMAG--LIT---------GPFTGAYCAS  148 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEEcChhh--ccC---------CCCcchhHHH
Confidence            96432   22344556778889998876665543    44  45578999998654  221         1223456 66


Q ss_pred             HHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcC-CCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          170 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       170 k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      |...+.....+..   ..|++++++|||.+..+..... ..+......... .+..........+..+|++..++.++..
T Consensus       149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence            7666655443332   2589999999998754321110 001110000000 0001112223457888888888888765


Q ss_pred             C
Q 020254          245 P  245 (328)
Q Consensus       245 ~  245 (328)
                      +
T Consensus       229 ~  229 (257)
T PRK09291        229 D  229 (257)
T ss_pred             C
Confidence            4

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.75  E-value=4.8e-17  Score=136.32  Aligned_cols=218  Identities=17%  Similarity=0.112  Sum_probs=134.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      |++++||||+|+||++++++|+++|++|+++ .|++....+...    .........+|+.|.+++.++++       ++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999875 455433221111    01111245689999988877664       57


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-----CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-----PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      |+|||+++....    .....+..+..++.|+.++..+++++...     ....+++|++||.... ++...        
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~-~~~~~--------  151 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR-LGAPG--------  151 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-cCCCC--------
Confidence            899999996422    22334556788899999998777665441     0123569999997541 33210        


Q ss_pred             CCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                       ....| .+|...+.....+..   ..+++++++||+.++++..................|+.      ...+++|++++
T Consensus       152 -~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~dva~~  224 (247)
T PRK09730        152 -EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ------RGGQPEEVAQA  224 (247)
T ss_pred             -cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC------CCcCHHHHHHH
Confidence             01236 566655554443332   24899999999999998532111000001111222221      12478999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCC
Q 020254          238 IYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++.++....  ..| .+.+.++
T Consensus       225 ~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        225 IVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHhhcChhhcCccCcEEecCCC
Confidence            999887542  234 6666554

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6.1e-17  Score=135.19  Aligned_cols=202  Identities=13%  Similarity=0.090  Sum_probs=136.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+|++++||||+|.||+.++++|+++|++|++++|++.+......    ......+..+|+.|.+++..+++       +
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            456799999999999999999999999999999998765433211    01111134679999887766654       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||++|....   .....+..+..+.+|+.++.++++++...  ..+..++|++||...  ++..         +..
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~  152 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAA--RNAF---------PQW  152 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHh--CcCC---------CCc
Confidence            8999999986422   12334567788899999988877766431  144578999999876  5432         123


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..   ..+++++++|||.+-.+..... ...         .   ......++..+|+|++++.
T Consensus       153 ~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-~~~---------~---~~~~~~~~~~~~va~~~~~  219 (241)
T PRK07454        153 GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-TVQ---------A---DFDRSAMLSPEQVAQTILH  219 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-ccc---------c---ccccccCCCHHHHHHHHHH
Confidence            456 666655555443322   2489999999999887642110 000         0   0001235889999999999


Q ss_pred             HhhCCC
Q 020254          241 ALSNPS  246 (328)
Q Consensus       241 ~~~~~~  246 (328)
                      ++..+.
T Consensus       220 l~~~~~  225 (241)
T PRK07454        220 LAQLPP  225 (241)
T ss_pred             HHcCCc
Confidence            998764

>PRK12743 oxidoreductase; Provisional

Probab=99.75  E-value=2.4e-16  Score=132.77  Aligned_cols=218  Identities=12%  Similarity=0.044  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ++++|+||||+|+||.+++++|+++|++|+++.++.... ...    ........+..+|+.++++++++++       +
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999999887654322 111    1111111244689999887766553       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||++|....   .....+.....+++|+.++..+++++...  .. ...++|++||...  ...         .+.
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~--~~~---------~~~  149 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE--HTP---------LPG  149 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc--cCC---------CCC
Confidence            8999999997432   22345677888999999999999887652  11 2358999998653  111         122


Q ss_pred             CCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....++.   ..+++++.++||.+.++.......-. ........++.      .+.+.+|++.++.
T Consensus       150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~------~~~~~~dva~~~~  222 (256)
T PRK12743        150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDV-KPDSRPGIPLG------RPGDTHEIASLVA  222 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHH-HHHHHhcCCCC------CCCCHHHHHHHHH
Confidence            3456 666665555444333   24799999999999987432111000 00111122221      2468899999999


Q ss_pred             HHhhCCC--CCc-eEEecCCC
Q 020254          240 EALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .++....  ..| ++.+.++.
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHhCccccCcCCcEEEECCCc
Confidence            9886543  345 66666654

>PRK06196 oxidoreductase; Provisional

Probab=99.75  E-value=6.1e-17  Score=140.46  Aligned_cols=225  Identities=15%  Similarity=0.046  Sum_probs=137.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi   94 (328)
                      ..++|+||||+|+||.++++.|+++|++|++++|++.+...............+|+.|.+++++++       .++|+||
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            347899999999999999999999999999999987654332211111124568999988887665       3689999


Q ss_pred             ECCCCCCC-CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccccc--CCCCCCCch-H
Q 020254           95 NLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD--ESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~--e~~~~~~~y-~  168 (328)
                      |+||.... .....+..+..+++|+.++..+++.+...  +.+..++|++||.+.. ++........  ...++...| .
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~-~~~~~~~~~~~~~~~~~~~~Y~~  183 (315)
T PRK06196        105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR-RSPIRWDDPHFTRGYDKWLAYGQ  183 (315)
T ss_pred             ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc-cCCCCccccCccCCCChHHHHHH
Confidence            99996432 12233456778899999976666544321  1445689999997541 2211100001  111222356 6


Q ss_pred             HHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHH-HHHHHc--CCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          169 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIP-LFMMFA--GGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       169 ~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      +|...+.....+..   ..|++++++|||.+.++.......... ......  +.++.     ..+..++|.|..++.++
T Consensus       184 SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~~l~  258 (315)
T PRK06196        184 SKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID-----PGFKTPAQGAATQVWAA  258 (315)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh-----hhcCCHhHHHHHHHHHh
Confidence            67666655444332   358999999999999884321110000 000000  01110     02457899999999998


Q ss_pred             hCCC---CCceEE
Q 020254          243 SNPS---YRGVIN  252 (328)
Q Consensus       243 ~~~~---~~g~~~  252 (328)
                      ..+.   .+|.|.
T Consensus       259 ~~~~~~~~~g~~~  271 (315)
T PRK06196        259 TSPQLAGMGGLYC  271 (315)
T ss_pred             cCCccCCCCCeEe
Confidence            7654   345554

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.6e-17  Score=137.25  Aligned_cols=205  Identities=17%  Similarity=0.154  Sum_probs=136.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +++||||||+|+||+++++.|+++|++|++++|++.......    ..........+|+.|.+.+.++++       ++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            368999999999999999999999999999999865433221    111111134578888888776654       689


Q ss_pred             EEEECCCCCCCC---CC-ChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIGT---RW-SSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|||+++.....   .. ..+.....++.|+.++.++++.+... ..+..++|++||...  +...         +....
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~  149 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAG--LTGV---------PTRSG  149 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccc--cCCC---------CCccH
Confidence            999999864332   12 34456777899999999999988532 124568999999775  4321         22345


Q ss_pred             h-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      | .+|...+.....+..   ..++++++++||.+..+.....   ..    ..+.+. ..+.....+++++|+|++++.+
T Consensus       150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~dva~~i~~~  222 (263)
T PRK06181        150 YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA---LD----GDGKPLGKSPMQESKIMSAEECAEAILPA  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh---cc----ccccccccccccccCCCCHHHHHHHHHHH
Confidence            6 666655555433322   2489999999999987642110   00    011111 1112223689999999999999


Q ss_pred             hhCC
Q 020254          242 LSNP  245 (328)
Q Consensus       242 ~~~~  245 (328)
                      +...
T Consensus       223 ~~~~  226 (263)
T PRK06181        223 IARR  226 (263)
T ss_pred             hhCC
Confidence            9863

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6.8e-17  Score=137.22  Aligned_cols=204  Identities=17%  Similarity=0.138  Sum_probs=133.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      |+|+||||+|+||.+++++|+++|++|++++|+..+.....    .......+..+|+.|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999876533221    111111244679988887776653       6899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |||+||....   .....+..+..+++|+.++..+.+++    ++  .+..++|++||...  +...         +...
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~--~~~~---------~~~~  147 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR--QKSGRIVNIASMAG--LMQG---------PAMS  147 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh--CCCCEEEEECChhh--cCCC---------CCch
Confidence            9999997432   22233556777899988877766664    44  45678999999765  3321         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....+..+   .|+++++++||.+.++.........+.........     ....+++++|+|+.++..
T Consensus       148 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~vA~~i~~~  222 (270)
T PRK05650        148 SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL-----LEKSPITAADIADYIYQQ  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHH-----hhcCCCCHHHHHHHHHHH
Confidence            56 6666554444333332   48999999999998874322111111110000000     012358999999999999


Q ss_pred             hhCC
Q 020254          242 LSNP  245 (328)
Q Consensus       242 ~~~~  245 (328)
                      +.+.
T Consensus       223 l~~~  226 (270)
T PRK05650        223 VAKG  226 (270)
T ss_pred             HhCC
Confidence            9864

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.5e-16  Score=132.50  Aligned_cols=219  Identities=14%  Similarity=0.101  Sum_probs=141.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++++||||+|+||++++++|++.|++|++++|+.... ...    ...........+|+.|.++++++++       +
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999976432 111    1111111134578988887776653       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .....+..+..+++|+.++..+++++...  ..+..++|++||...  +...+.       +..
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~~~-------~~~  157 (254)
T PRK06114         87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSG--IIVNRG-------LLQ  157 (254)
T ss_pred             CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhh--cCCCCC-------CCc
Confidence            7999999997432   23445677888999999997776665431  134568999998764  221111       112


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....++.   ..|+++.+++||.+.++..... ....... .....|++      .+..++|++.+++
T Consensus       158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~------r~~~~~dva~~~~  230 (254)
T PRK06114        158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQ------RMAKVDEMVGPAV  230 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCC------CCcCHHHHHHHHH
Confidence            457 667665555544443   2489999999999988742110 1111111 11122222      2567899999999


Q ss_pred             HHhhCCC--CCc-eEEecCC
Q 020254          240 EALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~  256 (328)
                      .++....  ..| ++.+.+|
T Consensus       231 ~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        231 FLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             HHcCccccCcCCceEEECcC
Confidence            9887533  334 7777665

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.9e-17  Score=136.81  Aligned_cols=216  Identities=13%  Similarity=0.078  Sum_probs=138.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~   95 (328)
                      ||+++||||+|+||+++++.|+++|++|++++|+...........  .....+|+.+.+.+.+++       .++|+|||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAG--FTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            478999999999999999999999999999999876543322111  114467999988877665       36899999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      +||....   .....+.....+++|+.++..+++++... ..+..++|++||...  +..         .+....| .+|
T Consensus        79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~sK  147 (274)
T PRK05693         79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSG--VLV---------TPFAGAYCASK  147 (274)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccc--cCC---------CCCccHHHHHH
Confidence            9996432   22345667888999999998888887542 123457888888653  221         1223456 666


Q ss_pred             HHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh-----------hhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          171 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-----------KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       171 ~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ...+.....+..   ..|+++++++||.+.++-.....           .+.+.............   ......+|+|+
T Consensus       148 ~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~  224 (274)
T PRK05693        148 AAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ---DNPTPAAEFAR  224 (274)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc---CCCCCHHHHHH
Confidence            665555444333   25899999999999765321100           00111000000000000   12357899999


Q ss_pred             HHHHHhhCCCCCceEEec
Q 020254          237 LIYEALSNPSYRGVINGT  254 (328)
Q Consensus       237 ~~~~~~~~~~~~g~~~i~  254 (328)
                      .++.++.++.....+.++
T Consensus       225 ~i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        225 QLLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             HHHHHHhCCCCCceEEec
Confidence            999998876544455554

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=3.2e-16  Score=133.48  Aligned_cols=222  Identities=23%  Similarity=0.284  Sum_probs=151.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+||||||||++|++++++|+++|++|++++|++.........   ......|+.+...+...+++.|.++++.+... .
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~---v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~   76 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG---VEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-G   76 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhcCC---cEEEEeccCCHhHHHHHhccccEEEEEecccc-c
Confidence            5899999999999999999999999999999998877666511   12445688899999999999999999987532 1


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhccc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  183 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  183 (328)
                      .     . ...........+..+++..   +.++++++|....     ..         ..+..+...+.+.+....  .
T Consensus        77 ~-----~-~~~~~~~~~~~~~a~~a~~---~~~~~~~~s~~~~-----~~---------~~~~~~~~~~~~~e~~l~--~  131 (275)
T COG0702          77 S-----D-AFRAVQVTAVVRAAEAAGA---GVKHGVSLSVLGA-----DA---------ASPSALARAKAAVEAALR--S  131 (275)
T ss_pred             c-----c-chhHHHHHHHHHHHHHhcC---CceEEEEeccCCC-----CC---------CCccHHHHHHHHHHHHHH--h
Confidence            1     0 1122223333334444332   4677777777554     11         011112333333333333  3


Q ss_pred             CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCCccCH
Q 020254          184 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRL  261 (328)
Q Consensus       184 ~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~~~~~  261 (328)
                      .+++++++|+..+|.......    .......+.+. ..+....+++..+|++.++...+..+.. +.+|.+++++..+.
T Consensus       132 sg~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~  207 (275)
T COG0702         132 SGIPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTL  207 (275)
T ss_pred             cCCCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecH
Confidence            689999999777766543221    11222334333 2233378999999999999999988753 45999999999999


Q ss_pred             HHHHHHHHHHhCCCCCC
Q 020254          262 AEMCDHLGNVLGRPSWL  278 (328)
Q Consensus       262 ~e~~~~i~~~~g~~~~~  278 (328)
                      .++.+.+....|++..+
T Consensus       208 ~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         208 AELASGLDYTIGRPVGL  224 (275)
T ss_pred             HHHHHHHHHHhCCccee
Confidence            99999999999998544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=1.1e-16  Score=134.59  Aligned_cols=216  Identities=15%  Similarity=0.104  Sum_probs=140.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccCCC-CCccccCceeecCChhhHhhcC-------C-Cc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------G-ST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~-~d   91 (328)
                      +.++|+||||+|+||+++++.|++.|++|+++.++... ....... ........+|+.|++++.++++       . +|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            34689999999999999999999999999887664332 1111110 0111144679988888776664       2 89


Q ss_pred             EEEECCCCCC---------CCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           92 AVVNLAGTPI---------GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        92 ~vi~~a~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      ++||+|+...         ......+.....++.|+.++..+++++...  ..+..+++++||...  ...         
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~~---------  152 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF--QNP---------  152 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc--cCC---------
Confidence            9999998521         122334667788999999999999988642  134568999998643  211         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-HHH-HcCCCCCCCCcccccccHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-FMM-FAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      .++.+.| .+|...+.....++.+   .++.+..++||.+..+.....  ..+. ... ....|+      ..+.+++|+
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~v  224 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAATTPL------RKVTTPQEF  224 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhcCCc------CCCCCHHHH
Confidence            1123467 7787777776665543   479999999999876532110  0011 111 111121      237899999


Q ss_pred             HHHHHHHhhCCC--CCc-eEEecCC
Q 020254          235 VNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++++..++....  ..| .+.+.++
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        225 ADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHHHcCchhcCccCCEEEeCCC
Confidence            999999997543  334 7777665

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.7e-16  Score=133.60  Aligned_cols=220  Identities=15%  Similarity=0.067  Sum_probs=142.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++++||||+|.||.+++++|++.|++|++++|++.+.......    .....+..+|+.++++++++++       ++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            346899999999999999999999999999999987654332211    1111234578988887776654       68


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||....    .....+..+..+++|+.++..+..++...  +.+..++|++||...  +...        .+..
T Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~--~~~~--------~~~~  154 (254)
T PRK07478         85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVG--HTAG--------FPGM  154 (254)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHh--hccC--------CCCc
Confidence            999999996421    23345667888999998777665544331  145668999999754  3211        1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHc-CCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....+..+   .++.+.+++||.+-.+................ ..+.      ..+..++|++++++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~  228 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHAL------KRMAQPEEIAQAAL  228 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCC------CCCcCHHHHHHHHH
Confidence            457 7777776666555443   37999999999997763211100000001111 1111      22568999999999


Q ss_pred             HHhhCCC--CCc-eEEecCCC
Q 020254          240 EALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .++..+.  ..| ++.+.++.
T Consensus       229 ~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        229 FLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHcCchhcCCCCCeEEeCCch
Confidence            9987543  234 66665553

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.74  E-value=2.3e-16  Score=132.05  Aligned_cols=217  Identities=14%  Similarity=0.057  Sum_probs=141.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +++++||||+|+||++++++|+++|++|++++|+.... ...    ........+..+|+.|.+.+.++++       ++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999985311 111    0011111244678888887766653       58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |+|||++|....   .....+.++..++.|+.++.++..++    ++  .+..++|++||...  +...         +.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~--~~~~---------~~  148 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE--QGYGRIINISSVNG--LKGQ---------FG  148 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--hCCeEEEEECChhh--ccCC---------CC
Confidence            999999997532   23345677888899999988875544    44  45678999999765  4322         22


Q ss_pred             CCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....+..   ..++++++++||.+.++.......... .......+      ...+..++|+++++.
T Consensus       149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~va~~~~  221 (245)
T PRK12824        149 QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVL-QSIVNQIP------MKRLGTPEEIAAAVA  221 (245)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHH-HHHHhcCC------CCCCCCHHHHHHHHH
Confidence            3456 666655444433332   248999999999998774322111110 01111112      123567899999999


Q ss_pred             HHhhCCC---CCceEEecCCCcc
Q 020254          240 EALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      .++....   .+..+++.++..+
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        222 FLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HHcCccccCccCcEEEECCCeec
Confidence            8886533   3458888887643

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.5e-17  Score=137.02  Aligned_cols=219  Identities=14%  Similarity=0.055  Sum_probs=143.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ..++++||||+|+||.++++.|+++|++|++++|++.........      ........+|+.|.+++.++++       
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999987654332111      1111244579988888776664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||....   .....+.++..+++|+.++..+++++...  ..+..++|++||...  +...         +.
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  154 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHA--FKII---------PG  154 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhh--ccCC---------CC
Confidence            68999999996422   22345677888999999998888877542  134568999999764  3211         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-h---hhHHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      ...| .+|...+.....+..+   .|+++..++||.+-.+..... .   ...... ......|.      .-+..++|+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~v  228 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM------KRIGRPEEV  228 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC------CCCCCHHHH
Confidence            2356 6676666665555433   489999999999876532110 0   000001 11111121      125678999


Q ss_pred             HHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          235 VNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.+++.++....  ..| ...+.+|.
T Consensus       229 a~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        229 AMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             HHHHHHHcCccccccCCcEEEECCCe
Confidence            999999987643  344 66666654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.74  E-value=1.4e-16  Score=139.53  Aligned_cols=243  Identities=20%  Similarity=0.177  Sum_probs=161.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCcccccC---CC-------------C---CccccCceeecC-
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIF---PG-------------K---KTRFFPGVMIAE-   79 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---~~-------------~---~~~~~~~~d~~~-   79 (328)
                      .++|+|||||||+|.-+++.|+..-   -+|+.+.|.+.......   ..             +   .....+..|+.+ 
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            5789999999999999999999752   38899988765431110   00             0   000111235443 


Q ss_pred             -----ChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC--
Q 020254           80 -----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--  152 (328)
Q Consensus        80 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~--  152 (328)
                           ..+.....+.+|+|||+||....   .+ .......+|+.|+.++++.|++. ...+-++++||+.+  .-..  
T Consensus        92 ~LGis~~D~~~l~~eV~ivih~AAtvrF---de-~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~--n~~~~~  164 (467)
T KOG1221|consen   92 DLGISESDLRTLADEVNIVIHSAATVRF---DE-PLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYS--NCNVGH  164 (467)
T ss_pred             ccCCChHHHHHHHhcCCEEEEeeeeecc---ch-hhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhhe--eccccc
Confidence                 33555566789999999996522   22 34566789999999999999996 45678999999876  3100  


Q ss_pred             -Cccccc--------------CCC---------C-----CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc
Q 020254          153 -ETEVFD--------------ESS---------P-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  202 (328)
Q Consensus       153 -~~~~~~--------------e~~---------~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  202 (328)
                       .+.++.              ++.         +     .++.| +.|...|.......  .+++++|+||+.|...-..
T Consensus       165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccC
Confidence             011111              110         0     13456 77776666665444  5899999999999987655


Q ss_pred             chhhhHHHHHHHc--------CCC---CCCCCcccccccHHHHHHHHHHHhhC--CC----CCceEEecCC--CccCHHH
Q 020254          203 ALAKMIPLFMMFA--------GGP---LGSGQQWFSWIHLDDIVNLIYEALSN--PS----YRGVINGTAP--NPVRLAE  263 (328)
Q Consensus       203 ~~~~~~~~~~~~~--------~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~--~~----~~g~~~i~~~--~~~~~~e  263 (328)
                      ++..|+...+...        |.-   ..+.+...++|.+|.++.+++.+.-.  ..    ...+||++++  .++++++
T Consensus       243 P~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~  322 (467)
T KOG1221|consen  243 PFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGD  322 (467)
T ss_pred             CCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHH
Confidence            5444444332111        111   25778888999999999999966521  11    1239999986  5899999


Q ss_pred             HHHHHHHHhCC
Q 020254          264 MCDHLGNVLGR  274 (328)
Q Consensus       264 ~~~~i~~~~g~  274 (328)
                      +.+...+....
T Consensus       323 ~~e~~~~~~~~  333 (467)
T KOG1221|consen  323 FIELALRYFEK  333 (467)
T ss_pred             HHHHHHHhccc
Confidence            99999998763

>PRK08643 acetoin reductase; Validated

Probab=99.74  E-value=1.8e-16  Score=133.65  Aligned_cols=218  Identities=15%  Similarity=0.048  Sum_probs=138.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +++++||||+|+||.++++.|+++|++|++++|+..........    ........+|+.+++.+.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999986543222111    1111134679999887766553       689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+||....   .....+..+..+++|+.++..+++++.+.  .. ...++|++||... .++.          +...
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~----------~~~~  150 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG-VVGN----------PELA  150 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc-ccCC----------CCCc
Confidence            99999986432   22334667888999999988777766542  12 2357899998754 1332          1223


Q ss_pred             ch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhH-------HH--HH-HHcCCCCCCCCcccccccH
Q 020254          166 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMI-------PL--FM-MFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~-------~~--~~-~~~~~~~~~~~~~~~~i~v  231 (328)
                      .| .+|...+.....+..   ..|++++.++||.+.++.........       ..  .. .....+      ...+...
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  224 (256)
T PRK08643        151 VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT------LGRLSEP  224 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC------CCCCcCH
Confidence            46 666655544443333   24899999999999876321100000       00  00 001111      1135688


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +|++.++..++....  ..| ++.+.++.
T Consensus       225 ~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        225 EDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            999999999987543  344 66666553

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-16  Score=133.54  Aligned_cols=224  Identities=10%  Similarity=0.013  Sum_probs=142.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----C----CCCCccccCceeecCChhhHhhcC-----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----F----PGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      +.++++||||+|+||.++++.|+++|++|++++++.......    .    .......+..+|+.++++++++++     
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            347899999999999999999999999977777654321110    0    001111134679999888876653     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                        ++|++||+||....   .....+..+..+++|+.++..+++++.+......++++++|+..+.+.           +.
T Consensus        87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------~~  155 (257)
T PRK12744         87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------PF  155 (257)
T ss_pred             hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------CC
Confidence              68999999996422   234556778899999999999999887631223567777554432121           22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....++.+   .++++++++||.+.++....... ..............+.....+.+++|++.++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIEDIVPFIR  234 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccccCCCCCHHHHHHHHH
Confidence            3456 7777777776666544   37999999999997763211000 00000000000011111224789999999999


Q ss_pred             HHhhCCC--CCceEEecCCC
Q 020254          240 EALSNPS--YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~g~~~i~~~~  257 (328)
                      .++....  .+.++++.++.
T Consensus       235 ~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        235 FLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             HhhcccceeecceEeecCCc
Confidence            9998532  23488887764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.74  E-value=3.1e-16  Score=132.03  Aligned_cols=219  Identities=15%  Similarity=0.095  Sum_probs=146.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||.++++.|+++|++|++++|+.........    .........+|+.|.+++.++++       ++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999987654332211    11111234689998887766543       58


Q ss_pred             cEEEECCCCCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           91 TAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        91 d~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      |++||+|+....  .....+.++..++.|+.++.++++++...  ..+..++|++||...  ...         .+....
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~  158 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--ENK---------NINMTS  158 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc--cCC---------CCCcch
Confidence            999999996422  23345667788999999999999988632  134458999999764  211         122345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      | .+|...+.....++.+   .++.++++.||.+..+.....  ..+..  ......++      ..+..++|+++++..
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~d~a~~~~~  230 (255)
T PRK06113        159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI------RRLGQPQDIANAALF  230 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            7 7777766666555432   378999999999876632110  11111  11112121      225788999999999


Q ss_pred             HhhCCC---CCceEEecCCCcc
Q 020254          241 ALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++....   .+.++++.++...
T Consensus       231 l~~~~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        231 LCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             HcCccccCccCCEEEECCCccc
Confidence            987543   2348888877543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=2.9e-16  Score=132.21  Aligned_cols=216  Identities=16%  Similarity=0.119  Sum_probs=140.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-ccCCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..|+++||||+|+||.++++.|+++|++|+++.++..... .+... . .....+|+.|.+++.++++       ++|+|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-G-VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-C-CeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3478999999999999999999999999998877654321 11111 0 1244679999888876654       68999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHH----HHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||....   .....+.++..+++|+.++..+    +..+++  .+..++|++||...  ++...        +....
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~~~--------~~~~~  151 (255)
T PRK06463         84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL--SKNGAIVNIASNAG--IGTAA--------EGTTF  151 (255)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh--cCCcEEEEEcCHHh--CCCCC--------CCccH
Confidence            999987432   2334566788899999996555    444443  45678999999775  53211        12245


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc--hhhhHHHH-HHH-cCCCCCCCCcccccccHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLF-MMF-AGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      | .+|...+.....++.+   .++++++++||.+-.+-...  ........ ... ...+      ...+..++|+++++
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~  225 (255)
T PRK06463        152 YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV------LKTTGKPEDIANIV  225 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC------cCCCcCHHHHHHHH
Confidence            7 6777766666555443   48999999999886542110  00000111 111 1111      12357799999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++....  ..| .+.+.+|.
T Consensus       226 ~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        226 LFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHcChhhcCCCCCEEEECCCe
Confidence            99987643  334 77776664

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2e-16  Score=133.15  Aligned_cols=218  Identities=13%  Similarity=0.048  Sum_probs=138.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      ..++|+||||+|+||.++++.|+++|++|++++|+............. .+..+|+.+.++++++++       ++|+||
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG-LFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457999999999999999999999999999999987643322111100 145689999888876664       579999


Q ss_pred             ECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |+||....     .+...+..+..+++|+.++..+++.+...  +.+..++|++||... .+|...         ....|
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~-~~g~~~---------~~~~Y  154 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVA-VMGSAT---------SQISY  154 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhh-ccCCCC---------CCcch
Confidence            99986421     12344567888999999988777765421  134567899888542 154321         12346


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|...+.....+..   ..+++++++|||.+.++..... ..-.... +.....+.      ..+..++|+++++..+
T Consensus       155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~l  228 (255)
T PRK06057        155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM------GRFAEPEEIAAAVAFL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence             566544444333222   2389999999999988742211 0000000 11111111      2478899999999988


Q ss_pred             hhCCC---CCceEEecCC
Q 020254          242 LSNPS---YRGVINGTAP  256 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~  256 (328)
                      +....   .+..+.+.++
T Consensus       229 ~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        229 ASDDASFITASTFLVDGG  246 (255)
T ss_pred             hCccccCccCcEEEECCC
Confidence            86543   2336666654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=4.2e-16  Score=129.59  Aligned_cols=212  Identities=16%  Similarity=0.097  Sum_probs=137.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~~  100 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|++.....  ..   .....+|+.++ +.+.+.+.++|+|||+||..
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~---~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~   78 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--GN---FHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL   78 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC--Cc---EEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence            34689999999999999999999999999999998644211  11   11335677776 44444456799999999853


Q ss_pred             C----CCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHH
Q 020254          101 I----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  173 (328)
Q Consensus       101 ~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~  173 (328)
                      .    ......+..+..+++|+.++.++++++...  ..+..++|++||...  +...         +....| .+|...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~a~  147 (235)
T PRK06550         79 DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIAS--FVAG---------GGGAAYTASKHAL  147 (235)
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--ccCC---------CCCcccHHHHHHH
Confidence            1    123456677889999999999998887642  134467999998764  2211         112345 556555


Q ss_pred             HHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHHHHH-HHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--
Q 020254          174 EWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--  246 (328)
Q Consensus       174 ~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--  246 (328)
                      +.....++.+   .++++++++||.+.++.... ... -.... .....+      ...+...+|+|++++.++....  
T Consensus       148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~s~~~~~  220 (235)
T PRK06550        148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP-GGLADWVARETP------IKRWAEPEEVAELTLFLASGKADY  220 (235)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc-hHHHHHHhccCC------cCCCCCHHHHHHHHHHHcChhhcc
Confidence            5444433332   48999999999998774211 100 00011 111112      1236788999999999986533  


Q ss_pred             CCc-eEEecCC
Q 020254          247 YRG-VINGTAP  256 (328)
Q Consensus       247 ~~g-~~~i~~~  256 (328)
                      ..| ++.+.+|
T Consensus       221 ~~g~~~~~~gg  231 (235)
T PRK06550        221 MQGTIVPIDGG  231 (235)
T ss_pred             CCCcEEEECCc
Confidence            334 6666555

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=2.3e-16  Score=133.17  Aligned_cols=219  Identities=17%  Similarity=0.132  Sum_probs=143.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .++||||||+|+||.+++++|+++|++|++++|+..+......    ......+..+|+.|.+++.++++       ++|
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id   91 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVD   91 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999998654322211    11111144679999888865553       589


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+|+....   .....+.++..++.|+.++.++++++...   +.+..++|++||.... ++....      .+...
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~-~~~~~~------~~~~~  164 (259)
T PRK08213         92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL-GGNPPE------VMDTI  164 (259)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc-cCCCcc------ccCcc
Confidence            99999986422   22344667788899999999999987652   1355689999997651 332211      12235


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....++.+   .++.+.+++|+.+-.+.... ...+...  .....++      .-+...+|++.++..
T Consensus       165 ~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~va~~~~~  236 (259)
T PRK08213        165 AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGED--LLAHTPL------GRLGDDEDLKGAALL  236 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHH--HHhcCCC------CCCcCHHHHHHHHHH
Confidence            67 7777776666555443   47999999999887664211 1111111  1122222      124568999999888


Q ss_pred             HhhCCC--CCc-eEEecCC
Q 020254          241 ALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~  256 (328)
                      ++....  ..| ++++.++
T Consensus       237 l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        237 LASDASKHITGQILAVDGG  255 (259)
T ss_pred             HhCccccCccCCEEEECCC
Confidence            886543  344 6666654

>PRK12742 oxidoreductase; Provisional

Probab=99.73  E-value=2.3e-16  Score=131.37  Aligned_cols=216  Identities=12%  Similarity=0.066  Sum_probs=138.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-cccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a   97 (328)
                      +.++|+||||+|.||++++++|+++|++|+++.|+.. ....+..... .....+|+.|.+.+.+.++   ++|++||+|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG-ATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC-CeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            4578999999999999999999999999988776432 2222111100 0133468888777766654   589999999


Q ss_pred             CCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHH
Q 020254           98 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  173 (328)
Q Consensus        98 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~  173 (328)
                      |....   .....+.++..+++|+.++..++..+.+......++|++||...  ...        ..+....| .+|...
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~--------~~~~~~~Y~~sKaa~  153 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG--DRM--------PVAGMAAYAASKSAL  153 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc--ccC--------CCCCCcchHHhHHHH
Confidence            86432   23445678899999999999887666552123468999998653  110        11233457 777766


Q ss_pred             HHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CC
Q 020254          174 EWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YR  248 (328)
Q Consensus       174 ~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~  248 (328)
                      +.....++.+   .++.+++++||.+..+..........  ......++      ..+..++|+++++..++....  ..
T Consensus       154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~--~~~~~~~~------~~~~~p~~~a~~~~~l~s~~~~~~~  225 (237)
T PRK12742        154 QGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKD--MMHSFMAI------KRHGRPEEVAGMVAWLAGPEASFVT  225 (237)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHH--HHHhcCCC------CCCCCHHHHHHHHHHHcCcccCccc
Confidence            6665544432   47999999999998764211111111  11111111      125788999999999887543  34


Q ss_pred             c-eEEecCC
Q 020254          249 G-VINGTAP  256 (328)
Q Consensus       249 g-~~~i~~~  256 (328)
                      | .+.+.++
T Consensus       226 G~~~~~dgg  234 (237)
T PRK12742        226 GAMHTIDGA  234 (237)
T ss_pred             CCEEEeCCC
Confidence            4 6666544

>PRK08264 short chain dehydrogenase; Validated

Probab=99.73  E-value=3.3e-16  Score=130.49  Aligned_cols=190  Identities=17%  Similarity=0.085  Sum_probs=134.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a   97 (328)
                      ..++|+||||+|+||++++++|+++|+ +|++++|++.+....   .....+..+|+.|.+.+.++++   .+|+|||++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   81 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDL---GPRVVPLQLDVTDPASVAAAAEAASDVTILVNNA   81 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhc---CCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence            446899999999999999999999998 999999987654431   1111244689999988887775   589999999


Q ss_pred             CCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      +....    .....+.....++.|+.++..+++++...  ..+..+++++||...  +...         +....| ..|
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~--~~~~---------~~~~~y~~sK  150 (238)
T PRK08264         82 GIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLS--WVNF---------PNLGTYSASK  150 (238)
T ss_pred             CcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh--ccCC---------CCchHhHHHH
Confidence            97221    23345677888999999999999987531  135678999999765  4321         122346 566


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ...+.....+..+   .+++++++||+.+.++....             .       ....+..+|+++.++..+...
T Consensus       151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~-------~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------L-------DAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------C-------CcCCCCHHHHHHHHHHHHhCC
Confidence            6555544443332   48999999999987663110             0       011577889999999888764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.7e-16  Score=132.93  Aligned_cols=217  Identities=14%  Similarity=0.054  Sum_probs=138.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ++++|+|+||+|+||.++++.|+++|++|+++ +|++.+.......    .....+..+|+.|++++.++++       +
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            45689999999999999999999999999998 8876543222110    1111244578888888776654       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||++|....   .....+..+..+..|+.++.++++++...  ..+.+++|++||.... ++..          ..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~~~~----------~~  152 (247)
T PRK05565         84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL-IGAS----------CE  152 (247)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc-cCCC----------Cc
Confidence            8999999997522   12345667888999999988887776542  1345679999997651 3321          12


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..   ..|++++++|||.+..+......... ........      ....+..++|++++++.
T Consensus       153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~va~~~~~  225 (247)
T PRK05565        153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED-KEGLAEEI------PLGRLGKPEEIAKVVLF  225 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH-HHHHHhcC------CCCCCCCHHHHHHHHHH
Confidence            345 555443333322222   24899999999998766432211100 00111111      11235788999999999


Q ss_pred             HhhCCC--CCc-eEEecCC
Q 020254          241 ALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~  256 (328)
                      ++....  ..| ++++.++
T Consensus       226 l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        226 LASDDASYITGQIITVDGG  244 (247)
T ss_pred             HcCCccCCccCcEEEecCC
Confidence            987644  334 7777665

>PRK08324 short chain dehydrogenase; Validated

Probab=99.73  E-value=1.6e-16  Score=150.93  Aligned_cols=226  Identities=17%  Similarity=0.122  Sum_probs=149.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      ..++|+||||+|+||.++++.|+++|++|++++|+...........   .......+|+.|.+++.++++       ++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3479999999999999999999999999999999876543222110   011244578988888776653       689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-CcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+||....   .......+...+++|+.++..+++++.+.  ..+. .++|++||...  +...         +...
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~--~~~~---------~~~~  569 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA--VNPG---------PNFG  569 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc--cCCC---------CCcH
Confidence            99999996433   23345677888999999999997777542  1332 68999999765  2211         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEE-cCCCcchhhhHHHHHHHcCCC-------CCCCCcccccccHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIHLDD  233 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~v~D  233 (328)
                      .| .+|...+.....+..+   .++++++++|+.+| +.+... ..+........+.+       .........+++++|
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence            57 7777777666555443   37999999999998 553211 01110000000110       122334556899999


Q ss_pred             HHHHHHHHhh--CCCC-CceEEecCCCcc
Q 020254          234 IVNLIYEALS--NPSY-RGVINGTAPNPV  259 (328)
Q Consensus       234 ~a~~~~~~~~--~~~~-~g~~~i~~~~~~  259 (328)
                      +|++++.++.  .... +.++++.+|...
T Consensus       649 vA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        649 VAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            9999999984  2233 348999887643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.73  E-value=2.7e-16  Score=131.57  Aligned_cols=218  Identities=16%  Similarity=0.120  Sum_probs=138.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhc-------CCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~v   93 (328)
                      +.++++||||+|+||+++++.|+++|+.|++.+|+..+....... ........+|+.+.+++++++       .++|+|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457999999999999999999999999998888876554332211 011113457888888777654       368999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+|+....   .......++..++.|+.++..+++++.+.  ..+.+++|++||.... ++..          ....| 
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~----------~~~~Y~  153 (245)
T PRK12936         85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV-TGNP----------GQANYC  153 (245)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC-cCCC----------CCcchH
Confidence            999996432   12345667888999999998888876531  1355689999996541 4422          12345 


Q ss_pred             HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|.........+..   ..++++++++||.+..+.......... .......+      ...+..++|+++++..++..
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~ia~~~~~l~~~  226 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQK-EAIMGAIP------MKRMGTGAEVASAVAYLASS  226 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHH-HHHhcCCC------CCCCcCHHHHHHHHHHHcCc
Confidence            455433333222221   248999999999876553211111000 00011111      12256799999999988865


Q ss_pred             CC--CCc-eEEecCCC
Q 020254          245 PS--YRG-VINGTAPN  257 (328)
Q Consensus       245 ~~--~~g-~~~i~~~~  257 (328)
                      ..  ..| ++++.++.
T Consensus       227 ~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        227 EAAYVTGQTIHVNGGM  242 (245)
T ss_pred             cccCcCCCEEEECCCc
Confidence            43  234 88887764

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.6e-16  Score=131.38  Aligned_cols=218  Identities=16%  Similarity=0.117  Sum_probs=138.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCChhhHhhc---------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI---------   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~---------   87 (328)
                      +.++++||||+|+||.++++.|++.|++|++..+ +........    ..........+|+.+.+++...+         
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            3479999999999999999999999999988754 333222111    11111113346887766554322         


Q ss_pred             ----CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCC
Q 020254           88 ----QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        88 ----~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                          .++|++||+||....   .+...+.++..+++|+.++..+++++........++|++||...  +...        
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~--------  152 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT--RISL--------  152 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc--ccCC--------
Confidence                168999999996422   23344567888899999999999887763122358999999865  3321        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                       +....| .+|...+.....++.+   .++++.++.||.+.++....... -+.. ......     .....+..++|++
T Consensus       153 -~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~dva  225 (252)
T PRK12747        153 -PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATTI-----SAFNRLGEVEDIA  225 (252)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHhc-----CcccCCCCHHHHH
Confidence             223457 7787776666554443   48999999999998874211100 0001 111000     0112367899999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +++..++....  ..| .+.+.++
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        226 DTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHHHHcCccccCcCCcEEEecCC
Confidence            99999886533  334 6766655

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.1e-16  Score=132.64  Aligned_cols=219  Identities=13%  Similarity=0.032  Sum_probs=141.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++++||||+|+||.+++++|+++|++|++++|++.+.......    .....+..+|+.+.+++.++++       ++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999999999987543322111    1111134578888888766553       68


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--C-CCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |+|||+|+....   .....+..+..+++|+.++.++++++...  . .+..++|++||... .++          .+..
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~-~~~----------~~~~  157 (263)
T PRK07814         89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMG-RLA----------GRGF  157 (263)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccc-cCC----------CCCC
Confidence            999999986322   23345677889999999999999998741  0 24567999998643 121          1233


Q ss_pred             Cch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      ..| .+|...+.....+..+  .++.++.++||.+..+.......-........+.     .....+..++|++++++.+
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~~l  232 (263)
T PRK07814        158 AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA-----TPLRRLGDPEDIAAAAVYL  232 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHH
Confidence            457 7777666665555443  2578999999988765321110000111111111     0112256889999999999


Q ss_pred             hhCCC---CCceEEecCC
Q 020254          242 LSNPS---YRGVINGTAP  256 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~  256 (328)
                      +....   .+..+.+.++
T Consensus       233 ~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        233 ASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             cCccccCcCCCEEEECCC
Confidence            87532   3336666554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.73  E-value=4e-17  Score=142.13  Aligned_cols=177  Identities=15%  Similarity=0.102  Sum_probs=119.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+++|+||||+|+||.++++.|+++|++|++++|+..+.......    .....+..+|+.|.++++++++       ++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999999999999999999986543322111    1111244679999888876664       48


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC--CCcEEEEecccceeecCC-Cc---cc--
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTS-ET---EV--  156 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~Ss~~v~~yg~~-~~---~~--  156 (328)
                      |+|||+||....    .....+.++..+++|+.++..+++++...  +.+  ..++|++||...  +... ..   .+  
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~--~~~~~~~~~~~~~~  162 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA--NPKELGGKIPIPAP  162 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc--CccccCCccCCCCc
Confidence            999999996422    23355678889999999999888877642  122  358999999765  3211 00   00  


Q ss_pred             cc------------------CCC--CCCCch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCC
Q 020254          157 FD------------------ESS--PSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKD  200 (328)
Q Consensus       157 ~~------------------e~~--~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~  200 (328)
                      .+                  +..  .+...| .+|...+.....+..+    .|+.++++|||.|++..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            00                  011  123457 7787665554444333    37999999999998643

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.4e-16  Score=134.52  Aligned_cols=219  Identities=12%  Similarity=0.068  Sum_probs=142.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.++++||||+|.||++++++|+++|++|++++|+.....+.... .....+..+|+.|.+++.++++       .+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            457999999999999999999999999999999987643322211 1111244689999888776653       68999


Q ss_pred             EECCCCCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           94 VNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        94 i~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      ||+||....  .....+.+...+++|+.++..+++++... .....++|++||... .++.          +....| .+
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~-~~~~----------~~~~~Y~as  153 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISA-KFAQ----------TGRWLYPAS  153 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhh-ccCC----------CCCchhHHH
Confidence            999996422  23445677888999999999888877642 123467999998754 1332          122346 66


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh-hHHHHHHH-c-CCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMF-A-GGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      |...+.....+..+   .++++++++||.+..+-...... ........ . ..++      ..+...+|+|+++..++.
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~~~~l~s  227 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLL------GRVGDPEEVAQVVAFLCS  227 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCC------CCccCHHHHHHHHHHHcC
Confidence            66555554444332   48999999999887653111000 00000000 0 1111      125678999999999987


Q ss_pred             CCC--CCc-eEEecCCC
Q 020254          244 NPS--YRG-VINGTAPN  257 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~~  257 (328)
                      ...  ..| .+.+.++.
T Consensus       228 ~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        228 DAASFVTGADYAVDGGY  244 (261)
T ss_pred             ccccCccCcEEEECCCe
Confidence            543  344 77776663

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=132.29  Aligned_cols=216  Identities=13%  Similarity=0.115  Sum_probs=143.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..+++|||||+|+||++++++|+++|++|++++|+..+......    .........+|+.|.+++.++++       ++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999999999998655432211    11111134578989888776653       58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||++|....   .....+.++..+++|+.++..+++++.+.  ..+..++|++||.... ++.          +...
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~  156 (254)
T PRK08085         88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE-LGR----------DTIT  156 (254)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc-cCC----------CCCc
Confidence            999999996422   23455677889999999988888877652  1345689999986531 221          2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      .| .+|...+.....+..+   .|+++.+++||.+.++.....   ..+....  ....|+      ..+...+|++.++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~--~~~~p~------~~~~~~~~va~~~  228 (254)
T PRK08085        157 PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWL--CKRTPA------ARWGDPQELIGAA  228 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHH--HhcCCC------CCCcCHHHHHHHH
Confidence            56 6676666666555443   489999999999988743211   1111111  111222      2367889999999


Q ss_pred             HHHhhCCC--CCc-eEEecCC
Q 020254          239 YEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ..++....  ..| +..+.+|
T Consensus       229 ~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        229 VFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             HHHhCccccCCcCCEEEECCC
Confidence            99987543  334 5555554

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=4.6e-16  Score=131.09  Aligned_cols=217  Identities=16%  Similarity=0.118  Sum_probs=141.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++++|+||||+|+||++++++|+++|++|++++|++........    .........+|+.+++++.++++       +
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            346899999999999999999999999999999998654322211    11111244678888887776653       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+++....   .+...+.++..+..|+.++..+.+++.+.  ..+.+++|++||...  +...         +..
T Consensus        89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~~---------~~~  157 (256)
T PRK06124         89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAG--QVAR---------AGD  157 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechh--ccCC---------CCc
Confidence            7999999996432   23345667788999999988888666431  145678999998764  2211         112


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ..| .+|...+.....++.+   .++++..++||.+.++.....   ..+...+  ....+.      ..+++++|++++
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~a~~  229 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWL--AQRTPL------GRWGRPEEIAGA  229 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHH--HhcCCC------CCCCCHHHHHHH
Confidence            356 5565554444333322   389999999999998752111   1111111  111121      237899999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCC
Q 020254          238 IYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++.++..+.  ..| .+.+.++
T Consensus       230 ~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        230 AVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHHHcCcccCCcCCCEEEECCC
Confidence            999998653  335 5555444

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.8e-16  Score=134.68  Aligned_cols=197  Identities=11%  Similarity=0.069  Sum_probs=132.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .++|+||||+|+||.++++.|+++|++|++++|+..........    .....+..+|+.|.+++.++++       ++|
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id  119 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD  119 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999987543322110    1111144579999888877665       789


Q ss_pred             EEEECCCCCCCCCC-----ChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|||+||.......     .....+..+++|+.++..+++++...  ..+..++|++||.+.  ++..        .+..
T Consensus       120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~--------~p~~  189 (293)
T PRK05866        120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGV--LSEA--------SPLF  189 (293)
T ss_pred             EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh--cCCC--------CCCc
Confidence            99999997533221     12445678899999988877765421  145678999999765  4311        1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....++.+   .++.+++++||.+-.+.....            .. ..   ....+..+++|+.++.
T Consensus       190 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~------------~~-~~---~~~~~~pe~vA~~~~~  253 (293)
T PRK05866        190 SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT------------KA-YD---GLPALTADEAAEWMVT  253 (293)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc------------cc-cc---CCCCCCHHHHHHHHHH
Confidence            457 6776666555444332   489999999998766532100            00 00   1224789999999999


Q ss_pred             HhhCC
Q 020254          241 ALSNP  245 (328)
Q Consensus       241 ~~~~~  245 (328)
                      ++.+.
T Consensus       254 ~~~~~  258 (293)
T PRK05866        254 AARTR  258 (293)
T ss_pred             HHhcC
Confidence            99864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.72  E-value=3e-16  Score=130.81  Aligned_cols=213  Identities=14%  Similarity=0.115  Sum_probs=137.5

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      |+|||++|+||++++++|+++|++|++++|+.... ...    ...........+|+.|.++++++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999976321 111    1111111244679988888777664       47999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||++|....   .....+.++..++.|+.++..+++++.+.  +.+.++++++||.+.. ||..          ....| 
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~g~~----------~~~~y~  149 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL-MGNA----------GQANYA  149 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-CCCC----------CCchhH
Confidence            999997532   23345677888999999999999988652  1345689999996431 5522          22446 


Q ss_pred             HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|...+.....+..   ..|+.++++||+.+.++........... ......+      ...+.+++|++++++.++..
T Consensus       150 ~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~a~~~~~~~~~  222 (239)
T TIGR01830       150 ASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKK-KILSQIP------LGRFGTPEEVANAVAFLASD  222 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHH-HHHhcCC------cCCCcCHHHHHHHHHHHhCc
Confidence            556544444333322   2489999999998866532211111100 1111112      12256899999999988855


Q ss_pred             CC---CCceEEecCC
Q 020254          245 PS---YRGVINGTAP  256 (328)
Q Consensus       245 ~~---~~g~~~i~~~  256 (328)
                      ..   .+.+|++.++
T Consensus       223 ~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       223 EASYITGQVIHVDGG  237 (239)
T ss_pred             ccCCcCCCEEEeCCC
Confidence            32   2348998665

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.72  E-value=5.1e-16  Score=130.96  Aligned_cols=218  Identities=12%  Similarity=0.085  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..++||||||+|+||.+++++|++.|++|++++|+.. .....    ..........+|+.+.+++.++++       ++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN-WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4579999999999999999999999999999998732 11111    111111244678988888776664       68


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |++||++|....   .....+.++..++.|+.++..+.+++...  ..+..++|++||...  +...         +..+
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  161 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLS--FQGG---------KFVP  161 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHh--ccCC---------CCch
Confidence            999999996432   23345677888999999987777666532  144568999999875  4322         1234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh-HHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....++.+   .|+++++++||.+..+........ ..........+.      ..+...+|++..+..
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  235 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA------GRWGEPDDLMGAAVF  235 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC------CCCCCHHHHHHHHHH
Confidence            57 6777666665555443   489999999999987642111000 000011111111      236788999999999


Q ss_pred             HhhCCC--CCc-eEEecCCC
Q 020254          241 ALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++....  ..| ++.+.++.
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        236 LASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HcChhhcCCCCCEEEECCCe
Confidence            887543  234 77776653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.72  E-value=1.2e-15  Score=126.90  Aligned_cols=215  Identities=14%  Similarity=0.087  Sum_probs=140.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      |+++++||||+|.||++++++|+++|++|++++|++.+......... .....+|+.|.++++++++       ++|++|
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAG-AQCIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            35689999999999999999999999999999998754321111100 1134679998887766542       589999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC--CCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |+||....   .....+..+..+++|+.++..+..++...  +.+  ..++|++||...  ...         .+....|
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~~~~~~Y  148 (236)
T PRK06483         80 HNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV--EKG---------SDKHIAY  148 (236)
T ss_pred             ECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh--ccC---------CCCCccH
Confidence            99986322   22345677889999999988776666542  122  357899988653  211         1223467


Q ss_pred             -HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                       .+|...+.....++.+.  ++++.+++||.+....... .....  ......++.      -+...+|+++++..++..
T Consensus       149 ~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~--~~~~~~~~~------~~~~~~~va~~~~~l~~~  219 (236)
T PRK06483        149 AASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQ--KALAKSLLK------IEPGEEEIIDLVDYLLTS  219 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-HHHHH--HHhccCccc------cCCCHHHHHHHHHHHhcC
Confidence             77877777766655542  5899999999985432111 11111  111112221      145689999999999874


Q ss_pred             CCCCc-eEEecCCC
Q 020254          245 PSYRG-VINGTAPN  257 (328)
Q Consensus       245 ~~~~g-~~~i~~~~  257 (328)
                      .-..| ++.+.++.
T Consensus       220 ~~~~G~~i~vdgg~  233 (236)
T PRK06483        220 CYVTGRSLPVDGGR  233 (236)
T ss_pred             CCcCCcEEEeCccc
Confidence            43444 77776654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.8e-16  Score=132.67  Aligned_cols=203  Identities=13%  Similarity=0.123  Sum_probs=134.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC--CCccccCceeecCChhhHhhcC--------CCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--------GSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--------~~d~   92 (328)
                      |++++||||+|+||++++++|+++|++|++++|++....+....  .....+..+|+.|.+++.++++        ++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47899999999999999999999999999999987754433211  1111245689999887776543        5799


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+||....   .....+..+..+++|+.++..+++++...  ..+..++|++||... .||..          ....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~----------~~~~Y  149 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA-IYGQP----------GLAVY  149 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhh-CcCCC----------Cchhh
Confidence            9999997533   22344667889999999999998887532  134578999998654 14422          12345


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|...+.....+..   ..++++++++||.+..+.......... .....        .....+..+|++++++.++.
T Consensus       150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~--------~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVD-AGSTK--------RLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhh-hhhHh--------hccCCCCHHHHHHHHHHHHh
Confidence             566555554444332   248999999999987653211000000 00000        00113667999999999997


Q ss_pred             CC
Q 020254          244 NP  245 (328)
Q Consensus       244 ~~  245 (328)
                      .+
T Consensus       221 ~~  222 (260)
T PRK08267        221 HP  222 (260)
T ss_pred             CC
Confidence            54

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.71  E-value=6.8e-16  Score=129.55  Aligned_cols=218  Identities=11%  Similarity=0.079  Sum_probs=142.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc--ccCCCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      +.++++||||+|.||++++++|+++|++|++++|+.....  .............+|+.|.++++++++       ++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999999999999999999999999988653211  111111111244689999988877664       5899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +||+||....   .....+.++..+++|+.++..+.+++...  ..+ ..++|++||...  +...         +....
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~  155 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS--FQGG---------IRVPS  155 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh--cCCC---------CCCcc
Confidence            9999997432   23346778889999999988888776542  122 468999999765  4322         12235


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      | .+|...+.....++.+   .|+++..++||.+-.+........-... ......|.      ..+...+|++.++..+
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~peeva~~~~~L  229 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA------SRWGTPDDLAGPAIFL  229 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence            7 7777766665544442   5899999999998766321110000000 11111222      1257889999999999


Q ss_pred             hhCCC--CCc-eEEecCC
Q 020254          242 LSNPS--YRG-VINGTAP  256 (328)
Q Consensus       242 ~~~~~--~~g-~~~i~~~  256 (328)
                      +....  ..| .+.+.++
T Consensus       230 ~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        230 SSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             hCccccCcCCceEEECCC
Confidence            87533  334 6666554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=5.6e-16  Score=130.30  Aligned_cols=214  Identities=14%  Similarity=0.076  Sum_probs=140.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .++++||||+|+||..+++.|+++|++|++++|+..+......    .........+|+.+.++++++++       ++|
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998754322211    01111134578888777665443       579


Q ss_pred             EEEECCCCCCC------------CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCccc
Q 020254           92 AVVNLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        92 ~vi~~a~~~~~------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                      +|||++|....            .....+.....++.|+.++..+..++...   ......++++||.+.  |+..    
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~--~~~~----  158 (253)
T PRK08217         85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR--AGNM----  158 (253)
T ss_pred             EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc--cCCC----
Confidence            99999986321            22344566778889999988776554431   012346888888765  6532    


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCccccccc
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~  230 (328)
                            ....| .+|...+.....+..   ..+++++.++||.+.++....   ..+..  ......+      ...+.+
T Consensus       159 ------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~------~~~~~~  223 (253)
T PRK08217        159 ------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---MKPEALERLEKMIP------VGRLGE  223 (253)
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---cCHHHHHHHHhcCC------cCCCcC
Confidence                  23456 667666655444433   258999999999998875321   11111  1111212      223678


Q ss_pred             HHHHHHHHHHHhhCCCCCc-eEEecCCC
Q 020254          231 LDDIVNLIYEALSNPSYRG-VINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~~~g-~~~i~~~~  257 (328)
                      ++|+++++..++......| +|++.++.
T Consensus       224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        224 PEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            9999999999987644344 89888764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.9e-16  Score=135.54  Aligned_cols=205  Identities=11%  Similarity=0.048  Sum_probs=137.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc-------CC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      ...++|+||||+|.||+++++.|+++|++|++++|+.........    .........+|+.|.+++++++       .+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            345799999999999999999999999999999998765433221    1111123457999998887766       36


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .+...+..+..+++|+.++.++..++...  +.+...+|++||...  +...         |..
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~--~~~~---------p~~  153 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGG--FAAQ---------PYA  153 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh--cCCC---------CCc
Confidence            8999999996433   23344667788999999988877766431  134567889988765  4321         223


Q ss_pred             Cch-HHHHHHHHHHHHhcc---c-CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---N-KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|.......+.+..   . .++.++.+.||.+.++........       .+...   .....++.++|+|++++
T Consensus       154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-------~~~~~---~~~~~~~~pe~vA~~il  223 (330)
T PRK06139        154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-------TGRRL---TPPPPVYDPRRVAKAVV  223 (330)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-------ccccc---cCCCCCCCHHHHHHHHH
Confidence            457 667654444333322   1 379999999999988753211000       01110   11223678999999999


Q ss_pred             HHhhCCC
Q 020254          240 EALSNPS  246 (328)
Q Consensus       240 ~~~~~~~  246 (328)
                      .++.++.
T Consensus       224 ~~~~~~~  230 (330)
T PRK06139        224 RLADRPR  230 (330)
T ss_pred             HHHhCCC
Confidence            9998764

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.9e-16  Score=131.25  Aligned_cols=195  Identities=15%  Similarity=0.093  Sum_probs=132.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC----CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ----GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~d~v   93 (328)
                      ||+|+||||+|+||.++++.|+++|++|++++|++.+.......     .....+..+|+.|.++++++++    ++|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            57899999999999999999999999999999987654332111     1111245679999888877664    57999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||++|.....   ....+.....++.|+.++..+++++...  ..+..++|++||... .++.          +....| 
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~----------~~~~~Y~  149 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG-DRGR----------ASNYVYG  149 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc-cCCC----------CCCcccH
Confidence            9999864322   2334555678899999999998887642  135678999998643 1221          112345 


Q ss_pred             HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|...+.....++   ...|+++.+++|+.+.++....             ...  +  ......++|+++.++..+.+
T Consensus       150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-------------~~~--~--~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-------------LKL--P--GPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-------------cCC--C--ccccCCHHHHHHHHHHHHhC
Confidence            56655544444332   2358999999999998863110             000  0  11257799999999999986


Q ss_pred             C
Q 020254          245 P  245 (328)
Q Consensus       245 ~  245 (328)
                      +
T Consensus       213 ~  213 (243)
T PRK07102        213 G  213 (243)
T ss_pred             C
Confidence            4

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.1e-16  Score=131.75  Aligned_cols=222  Identities=13%  Similarity=0.030  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~------~~   90 (328)
                      +.++++||||+|.||.++++.|+++|++|++++|+..+.......     ........+|+.|+++++++++      ++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            346899999999999999999999999999999986543322110     1111244679999988877664      58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |++||++|....   .+...+.+...+++|+.+...+.+++...  ..+..++|++||...  +...         +...
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~--~~~~---------~~~~  155 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI--KEPI---------PNIA  155 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc--cCCC---------Ccch
Confidence            999999996432   23456778888999988866665554431  145578999999765  3211         1223


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-h--------hHHHHH-HHcCCCCCCCCcccccccH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-K--------MIPLFM-MFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~--------~~~~~~-~~~~~~~~~~~~~~~~i~v  231 (328)
                      .| .+|.........++.+   .|+++..+.||.+..+...... .        .-.... .....|+      ..+..+
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p  229 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL------GRLGEP  229 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc------ccCcCH
Confidence            45 5565555544444332   4899999999999765211000 0        000011 1111111      225778


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCCCccC
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAPNPVR  260 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~~~~~  260 (328)
                      +|++.++..++....  ..| ++.+.++..++
T Consensus       230 ~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        230 EEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            999999999987533  344 67776665444

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.71  E-value=7.1e-16  Score=130.11  Aligned_cols=217  Identities=12%  Similarity=0.076  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++.........    ........+|+.+.+++.++++       ++
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI   87 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            357999999999999999999999999999999987654322111    1111244578888888877664       58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC--------CCCcEEEEecccceeecCCCcccc
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE--------GVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~--------~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      |+|||+++....   .+...+.++..++.|+.++..+++++...  ..        ...++|++||...  +..      
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~------  159 (258)
T PRK06949         88 DILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG--LRV------  159 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc--cCC------
Confidence            999999996432   12334667888999999999998877531  01        1357899988765  331      


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                         .+....| .+|...+.....+..+   .++++++++||.++++....... .......... +.    ...+...+|
T Consensus       160 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~-~~----~~~~~~p~~  230 (258)
T PRK06949        160 ---LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSM-LP----RKRVGKPED  230 (258)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhc-CC----CCCCcCHHH
Confidence               1223456 6676666655544433   48999999999999875321100 0111111111 00    123566899


Q ss_pred             HHHHHHHHhhCCC--CCc-eEEecC
Q 020254          234 IVNLIYEALSNPS--YRG-VINGTA  255 (328)
Q Consensus       234 ~a~~~~~~~~~~~--~~g-~~~i~~  255 (328)
                      +++++..++....  ..| +..+.+
T Consensus       231 ~~~~~~~l~~~~~~~~~G~~i~~dg  255 (258)
T PRK06949        231 LDGLLLLLAADESQFINGAIISADD  255 (258)
T ss_pred             HHHHHHHHhChhhcCCCCcEEEeCC
Confidence            9999999987543  345 444443

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.3e-16  Score=136.55  Aligned_cols=211  Identities=14%  Similarity=0.052  Sum_probs=137.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+++|+||||+|+||.++++.|+++|++|++++|++........    .........+|+.|.++++++++       ++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            45789999999999999999999999999999998754332211    11111244679999988876653       68


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |++||+|+....   .....+..+..+++|+.+...+..++.+.  ..+..++|++||...  |...         +...
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~--~~~~---------~~~~  155 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA--YRSI---------PLQS  155 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh--ccCC---------Ccch
Confidence            999999996432   23445667788889888766655444331  145678999999876  5422         2234


Q ss_pred             ch-HHHHHHHHHHHHhcc-----cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...+.....+..     ..++.+++++||.+.++....       .......   .......+..++|+|++++
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~-------~~~~~~~---~~~~~~~~~~pe~vA~~i~  225 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW-------ARSRLPV---EPQPVPPIYQPEVVADAIL  225 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh-------hhhhccc---cccCCCCCCCHHHHHHHHH
Confidence            56 666655444433322     247999999999987763211       0000000   0111224678999999999


Q ss_pred             HHhhCCCCCceEEecC
Q 020254          240 EALSNPSYRGVINGTA  255 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~~  255 (328)
                      .++.++.  ..+.++.
T Consensus       226 ~~~~~~~--~~~~vg~  239 (334)
T PRK07109        226 YAAEHPR--RELWVGG  239 (334)
T ss_pred             HHHhCCC--cEEEeCc
Confidence            9998753  3455544

>PRK08017 oxidoreductase; Provisional

Probab=99.71  E-value=6.9e-16  Score=130.00  Aligned_cols=203  Identities=15%  Similarity=0.096  Sum_probs=131.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc--------CCCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~vi   94 (328)
                      +++|+||||+|+||.++++.|+++|++|++++|+..+........  .....+|+.|.+++.+++        ..+|.++
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLG--FTGILLDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCC--CeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            358999999999999999999999999999999876543322111  113457888877665443        2579999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHH----HHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |++|....   .....+..+..++.|+.++.++    ++.+.+  .+.+++|++||...  +..         .+....|
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~iv~~ss~~~--~~~---------~~~~~~Y  146 (256)
T PRK08017         80 NNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP--HGEGRIVMTSSVMG--LIS---------TPGRGAY  146 (256)
T ss_pred             ECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCCEEEEEcCccc--ccC---------CCCccHH
Confidence            99986322   1234456678889999987775    555555  56678999998643  221         1223456


Q ss_pred             -HHHHHHHHHHHHh---cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHh
Q 020254          168 -LAEVCREWEGTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 -~~k~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                       .+|...+.....+   ....+++++++|||.+..+....   ...   .....+. ..+...+.+++++|+++++..++
T Consensus       147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~  220 (256)
T PRK08017        147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN---VNQ---TQSDKPVENPGIAARFTLGPEAVVPKLRHAL  220 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc---ccc---hhhccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence             6676666544322   22358999999998876542110   000   0001111 11122345799999999999999


Q ss_pred             hCCC
Q 020254          243 SNPS  246 (328)
Q Consensus       243 ~~~~  246 (328)
                      ..+.
T Consensus       221 ~~~~  224 (256)
T PRK08017        221 ESPK  224 (256)
T ss_pred             hCCC
Confidence            8765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.71  E-value=8.8e-16  Score=128.76  Aligned_cols=218  Identities=17%  Similarity=0.090  Sum_probs=134.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CcccccC----CCCCccccCceeecCChhhHhhc-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      |+++|+||||+|+||+.+++.|+++|++|+++.++. .......    ..........+|+.+.+++.+++       .+
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            357999999999999999999999999998765433 3222111    11111124567888888776554       36


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-C-CC---CCcEEEEecccceeecCCCcccccCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG---VRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~---~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      +|+|||+||....    .+...+..+..+.+|+.++..++.++.+. . .+   ..++|++||.... ++...       
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~-~~~~~-------  152 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR-LGSPN-------  152 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-CCCCC-------
Confidence            8999999996422    23345566778899999988887544431 0 11   2458999986541 44221       


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHH-cCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a  235 (328)
                        ....| .+|...+.....++.+   .+++++++|||.+..+....... ....... ...++      --...++|++
T Consensus       153 --~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~e~va  223 (248)
T PRK06947        153 --EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ-PGRAARLGAQTPL------GRAGEADEVA  223 (248)
T ss_pred             --CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC-HHHHHHHhhcCCC------CCCcCHHHHH
Confidence              11246 6676665554444332   38999999999998874211000 0111111 11111      1146789999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +.++.++..+.  ..| ++.+.++
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        224 ETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHcCccccCcCCceEeeCCC
Confidence            99999988754  344 5555443

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.9e-16  Score=129.78  Aligned_cols=219  Identities=14%  Similarity=0.079  Sum_probs=143.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..++++||||+|.||.+++++|+++|++|++++|+.........    .........+|+.|++++.++++       ++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998654332211    11111234579999888776653       78


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||....   .....+.++..+++|+.++..+++++...  +.+ ..+++++||.... ....+        +..
T Consensus        88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~--------~~~  158 (253)
T PRK05867         88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH-IINVP--------QQV  158 (253)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc-CCCCC--------CCc
Confidence            999999996432   22345667788899999999998887542  122 3468888876431 11000        112


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..+   .|+++.+++||.+-.+..........  ......+.      ..+..++|+|++++.
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~--~~~~~~~~------~r~~~p~~va~~~~~  230 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQP--LWEPKIPL------GRLGRPEELAGLYLY  230 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHH--HHHhcCCC------CCCcCHHHHHHHHHH
Confidence            357 7777776666555443   48999999999997764221111111  11112222      125789999999999


Q ss_pred             HhhCCC--CCc-eEEecCCC
Q 020254          241 ALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++....  ..| ++.+.+|.
T Consensus       231 L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HcCcccCCcCCCeEEECCCc
Confidence            987543  334 77776654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.1e-15  Score=128.43  Aligned_cols=218  Identities=17%  Similarity=0.057  Sum_probs=141.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||.+++++|+++|++|++++|+..........    .....+..+|+.+.++++++++       ++
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            347899999999999999999999999999999986543322111    1111234578888887765553       58


Q ss_pred             cEEEECCCCCC----CCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |+|||+|+...    ......+..+..++.|+.++..++.++.+.  ..+..+++++||...  +..         .+..
T Consensus        87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~  155 (252)
T PRK07035         87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNG--VSP---------GDFQ  155 (252)
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhh--cCC---------CCCC
Confidence            99999998531    123445667788999999998887776432  145678999988653  221         1233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHH-HcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....+..+   .|++++.+.||.+..+.......-...... ....+.      ..+..++|+|+++.
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~  229 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL------RRHAEPSEMAGAVL  229 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC------CCcCCHHHHHHHHH
Confidence            457 7777777666555443   389999999999876532111000011111 111111      22567899999999


Q ss_pred             HHhhCCC--CCc-eEEecCC
Q 020254          240 EALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~  256 (328)
                      .++....  ..| ++.+.++
T Consensus       230 ~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        230 YLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHhCccccCccCCEEEeCCC
Confidence            9887643  344 6666544

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.71  E-value=7.6e-16  Score=129.52  Aligned_cols=219  Identities=14%  Similarity=0.086  Sum_probs=142.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||.+++++|+++|++|++++|+.........    .........+|+.+.+++.++++       ++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999999999998765332211    11111244578988887776654       56


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |+|||++|....    .+...+.++..+++|+.++..+++++...  ..+..+++++||...  +...         +..
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~--~~~~---------~~~  154 (253)
T PRK06172         86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAG--LGAA---------PKM  154 (253)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhh--ccCC---------CCC
Confidence            999999996422    23345677888899999987766654321  134568999999775  4432         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-HHHH-cCCCCCCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-FMMF-AGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..| .+|...+.....+..+   .++++.+++||.+-.+.........+. .... ...+.      ..+..++|++..+
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~ia~~~  228 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV------GRIGKVEEVASAV  228 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC------CCccCHHHHHHHH
Confidence            457 6777666665554443   479999999999876632111000011 1111 11111      2256899999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++....  ..| .+.+.++.
T Consensus       229 ~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        229 LYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHhCccccCcCCcEEEECCCc
Confidence            99987643  344 67776654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.5e-16  Score=133.00  Aligned_cols=221  Identities=15%  Similarity=0.091  Sum_probs=143.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.++|+|+||+|+||..++++|+++|++ |++++|+..+.....    .......+..+|+.+++++.++++       
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999998 999999865433111    111111134578988887776653       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|+|||+++....   .+...+..+..++.|+.++.++++++.+.   .....++|++||...  ++..         +
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~--~~~~---------~  152 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA--HGGQ---------P  152 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc--ccCC---------C
Confidence            58999999996432   13345666778999999999998877542   112357999998775  5432         1


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hh---hHHH-HHHHcCCCCCCCCcccccccHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK---MIPL-FMMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                      ....| .+|...+.....+..+   .++.++.++||.+.++..... ..   .... ......     ......+++++|
T Consensus       153 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  227 (260)
T PRK06198        153 FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA-----TQPFGRLLDPDE  227 (260)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhc-----cCCccCCcCHHH
Confidence            23456 6676666555444332   479999999999998853211 00   0011 111110     111234689999


Q ss_pred             HHHHHHHHhhCCC---CCceEEecCCC
Q 020254          234 IVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       234 ~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++++++.++....   .+.++.+.++.
T Consensus       228 ~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        228 VARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHHcChhhCCccCceEeECCcc
Confidence            9999999986543   33477776654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.70  E-value=6.9e-16  Score=131.11  Aligned_cols=218  Identities=16%  Similarity=0.070  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.+++|||||+|+||.++++.|+++|++|++++|+ .......    ..........+|+.+.+++.++++       ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            45789999999999999999999999999999998 4322211    111111244689999887766553       58


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |++||+||....    .....+..+..+++|+.++..+++++... .....++|++||...  +...         +...
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  152 (272)
T PRK08589         84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSG--QAAD---------LYRS  152 (272)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhh--cCCC---------CCCc
Confidence            999999997422    12344667888899999987777765542 112368999999765  3321         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-----hhHHHHHH-H-cCCCCCCCCcccccccHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-----KMIPLFMM-F-AGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-----~~~~~~~~-~-~~~~~~~~~~~~~~i~v~D~  234 (328)
                      .| .+|...+.....++.+   .|++++++.||.|..+......     .....+.. . ...|+      ..+..++|+
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v  226 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL------GRLGKPEEV  226 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCC------CCCcCHHHH
Confidence            57 7776666666555432   4899999999999876321110     00000100 0 00111      125689999


Q ss_pred             HHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          235 VNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +++++.++....  ..| ++.+.++.
T Consensus       227 a~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        227 AKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHHHHHcCchhcCcCCCEEEECCCc
Confidence            999999987533  344 66666654

>PRK09242 tropinone reductase; Provisional

Probab=99.70  E-value=1.1e-15  Score=128.87  Aligned_cols=218  Identities=12%  Similarity=0.101  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhc-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCI-------Q   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~-------~   88 (328)
                      ..++++||||+|.||+++++.|.++|++|++++|+.+...+....      ........+|+.+.+++++++       .
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999987553322111      111123457888887766554       3


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||++|....   .....+.++..+++|+.++..+++++.+.  ..+..++|++||...  +...         +.
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~--~~~~---------~~  156 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG--LTHV---------RS  156 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECcccc--CCCC---------CC
Confidence            68999999996322   23456778889999999999998887531  134578999999765  4321         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|...+.....++.+   .+++++.++||.+.++............ ......++      .-+...+|++.++
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~  230 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM------RRVGEPEEVAAAV  230 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence            3456 6666655555444322   4899999999999887532110000111 11111121      1245789999999


Q ss_pred             HHHhhCCC--CCc-eEEecCC
Q 020254          239 YEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ..++....  ..| .+.+.++
T Consensus       231 ~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        231 AFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHhCcccccccCCEEEECCC
Confidence            99986532  234 6666554

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.4e-15  Score=127.67  Aligned_cols=195  Identities=13%  Similarity=0.093  Sum_probs=127.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCc-ccc----cCCCCC-ccccCceeecCChhhHhhcC-----
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK-AEL----IFPGKK-TRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~----~~~~~~-~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      .+.++|+||||+|+||++++++|+++| ++|++++|++++ ...    +..... ...+..+|+.|.+++.++++     
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            356789999999999999999999985 999999998765 221    111110 12245689988887554442     


Q ss_pred             -CCcEEEECCCCCCCC--CC-ChhHHHHHHHhhhhhHHH----HHHHHhcCCCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 -GSTAVVNLAGTPIGT--RW-SSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~--~~-~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                       ++|++||++|.....  .+ ........+++|+.++..    +++.+.+  .+..++|++||...  +..         
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~--~~~~~iv~isS~~g--~~~---------  152 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA--QGFGQIIAMSSVAG--ERV---------  152 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh--cCCceEEEEechhh--cCC---------
Confidence             699999999874321  11 112223568999988766    5556665  56789999999753  221         


Q ss_pred             CCCCCch-HHHHHHHHHHHHh---cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      .+....| .+|.........+   ....++++++++||.+..+-....           . +      ....+..+|+|+
T Consensus       153 ~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-----------~-~------~~~~~~~~~~A~  214 (253)
T PRK07904        153 RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-----------K-E------APLTVDKEDVAK  214 (253)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-----------C-C------CCCCCCHHHHHH
Confidence            1222346 5565544332222   123589999999999987621100           0 0      012478999999


Q ss_pred             HHHHHhhCCC
Q 020254          237 LIYEALSNPS  246 (328)
Q Consensus       237 ~~~~~~~~~~  246 (328)
                      .++..+.++.
T Consensus       215 ~i~~~~~~~~  224 (253)
T PRK07904        215 LAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHcCC
Confidence            9999998754

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.4e-16  Score=128.53  Aligned_cols=214  Identities=18%  Similarity=0.098  Sum_probs=142.8

Q ss_pred             EEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcC---CCcEEEECCCCC
Q 020254           27 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  100 (328)
Q Consensus        27 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~~  100 (328)
                      +||||+|+||++++++|+++|++|++++|++.........   .....+..+|+.|.+++.++++   ++|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            6999999999999999999999999999986543322110   1111244679999998888775   479999999864


Q ss_pred             CCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHH
Q 020254          101 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  176 (328)
Q Consensus       101 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  176 (328)
                      ...   +...+..+..+++|+.++..+.++...  .+.+++|++||.+.  |...         +..+.| .+|...+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~g~iv~~ss~~~--~~~~---------~~~~~Y~~sK~a~~~~  147 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARI--APGGSLTFVSGFAA--VRPS---------ASGVLQGAINAALEAL  147 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh--cCCeEEEEECchhh--cCCC---------CcchHHHHHHHHHHHH
Confidence            322   234567788999999999999996554  45678999999876  5421         233456 667666665


Q ss_pred             HHHhcccC-CCeEEEEEeceEEcCCCcch-h-hhHHHHH-HHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCc-eE
Q 020254          177 GTALKVNK-DVRLALIRIGIVLGKDGGAL-A-KMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VI  251 (328)
Q Consensus       177 ~~~~~~~~-~~~~~ilRp~~v~g~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~  251 (328)
                      ...+..+. +++++.++|+.+..+..... . ....... .....+.      ..+..++|+|++++.++......| .|
T Consensus       148 ~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~~~~~~~G~~~  221 (230)
T PRK07041        148 ARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA------RRVGQPEDVANAILFLAANGFTTGSTV  221 (230)
T ss_pred             HHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhcCCCcCCcEE
Confidence            55544432 57899999998866431100 0 0001111 1111111      124578999999999998654434 88


Q ss_pred             EecCCCcc
Q 020254          252 NGTAPNPV  259 (328)
Q Consensus       252 ~i~~~~~~  259 (328)
                      ++.++.++
T Consensus       222 ~v~gg~~~  229 (230)
T PRK07041        222 LVDGGHAI  229 (230)
T ss_pred             EeCCCeec
Confidence            98887643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.70  E-value=5.4e-16  Score=132.27  Aligned_cols=217  Identities=15%  Similarity=0.147  Sum_probs=140.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .++++||||+|+||+++++.|+++|++|++++|+.........    .........+|+.|.+++.++++       ++|
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   89 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCD   89 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999998654332211    11111234678888887766543       689


Q ss_pred             EEEECCCCCCC------------------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecC
Q 020254           92 AVVNLAGTPIG------------------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGT  151 (328)
Q Consensus        92 ~vi~~a~~~~~------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~  151 (328)
                      ++||+||....                  .....+.+...+++|+.++..++.++.+.  ..+..++|++||...  +..
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~~  167 (278)
T PRK08277         90 ILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA--FTP  167 (278)
T ss_pred             EEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh--cCC
Confidence            99999995321                  12335667888999999987665554331  134578999999876  542


Q ss_pred             CCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-----hhHHHH-HHHcCCCCCC
Q 020254          152 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-----KMIPLF-MMFAGGPLGS  221 (328)
Q Consensus       152 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-----~~~~~~-~~~~~~~~~~  221 (328)
                      .         +....| .+|...+.....++.+   .++++.+++||.+.++......     ...... ......|+  
T Consensus       168 ~---------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~--  236 (278)
T PRK08277        168 L---------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPM--  236 (278)
T ss_pred             C---------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCc--
Confidence            2         223457 6776666665544443   3899999999999987421100     000000 11111121  


Q ss_pred             CCcccccccHHHHHHHHHHHhhC-CC--CCc-eEEecCC
Q 020254          222 GQQWFSWIHLDDIVNLIYEALSN-PS--YRG-VINGTAP  256 (328)
Q Consensus       222 ~~~~~~~i~v~D~a~~~~~~~~~-~~--~~g-~~~i~~~  256 (328)
                          ..+...+|+|++++.++.. ..  ..| .+.+.+|
T Consensus       237 ----~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        237 ----GRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             ----cCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence                2256789999999998876 33  344 6666555

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.70  E-value=9.7e-16  Score=124.04  Aligned_cols=189  Identities=19%  Similarity=0.133  Sum_probs=132.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  100 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~~  100 (328)
                      |+++||||+|.||.++++.|.++ ++|++++|++.             ...+|+.|.++++++++   ++|++||+||..
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            58999999999999999999998 99999998753             23479999998887765   789999999964


Q ss_pred             CCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHH
Q 020254          101 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  176 (328)
Q Consensus       101 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  176 (328)
                      ...   ....+.+...+++|+.++.++++++.........++++||...  ...         .+....| .+|...+..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~--~~~---------~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILS--DEP---------IPGGASAATVNGALEGF  135 (199)
T ss_pred             CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEccccc--CCC---------CCCchHHHHHHHHHHHH
Confidence            322   2345667888899999999999887653123356888887543  111         1223456 667666655


Q ss_pred             HHHhcc--cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEe
Q 020254          177 GTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  253 (328)
Q Consensus       177 ~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i  253 (328)
                      ...++.  ..++.+..++||.+-.+..    .    .    +..+.    ...++.++|+|+.++.+++....+++|++
T Consensus       136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~----~----~----~~~~~----~~~~~~~~~~a~~~~~~~~~~~~g~~~~~  198 (199)
T PRK07578        136 VKAAALELPRGIRINVVSPTVLTESLE----K----Y----GPFFP----GFEPVPAARVALAYVRSVEGAQTGEVYKV  198 (199)
T ss_pred             HHHHHHHccCCeEEEEEcCCcccCchh----h----h----hhcCC----CCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence            544433  3589999999998754311    0    0    00010    12368999999999999987544446664

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.7e-16  Score=129.91  Aligned_cols=196  Identities=14%  Similarity=0.151  Sum_probs=132.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +++++||||+|+||++++++|+++|++|++++|++.+.......      .....+..+|+.+.+++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999987654322110      1111234679988887765543       6


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||.....   ....+.....+++|+.++..+++++...  ..+..++|++||.... ++..         ...
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~---------~~~  151 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV-RGLP---------GVK  151 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc-cCCC---------CCc
Confidence            89999999974332   2234556778899999998888876431  1456789999996541 3311         012


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..   ..++++++++||.+.++.....           +      . ....+..+|.++.++.
T Consensus       152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-----------~------~-~~~~~~~~~~a~~i~~  213 (248)
T PRK08251        152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-----------K------S-TPFMVDTETGVKALVK  213 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-----------c------c-CCccCCHHHHHHHHHH
Confidence            456 666655554443332   2479999999999977632110           0      0 1125789999999999


Q ss_pred             HhhCCC
Q 020254          241 ALSNPS  246 (328)
Q Consensus       241 ~~~~~~  246 (328)
                      +++...
T Consensus       214 ~~~~~~  219 (248)
T PRK08251        214 AIEKEP  219 (248)
T ss_pred             HHhcCC
Confidence            998643

>PRK07069 short chain dehydrogenase; Validated

Probab=99.69  E-value=1.4e-15  Score=127.72  Aligned_cols=213  Identities=15%  Similarity=0.158  Sum_probs=134.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecC-CCcccccCCC------CCccccCceeecCChhhHhhcC-------CC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +|+||||+|+||.++++.|+++|++|++++|+ ..........      ........+|+.|.+.+.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999998 3322221110      0001124579999888766553       68


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhh----hHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIR----VTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |+|||+||.....   +...+.....+++|+.    .+..+++++++  .+.+++|++||...  +....         .
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~~ss~~~--~~~~~---------~  147 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA--SQPASIVNISSVAA--FKAEP---------D  147 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCcEEEEecChhh--ccCCC---------C
Confidence            9999999975332   2334556777889988    66777777776  56678999999875  44221         2


Q ss_pred             CCch-HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchh-hhH--HHH-HHHcCCCCCCCCcccccccHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALA-KMI--PLF-MMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~-~~~--~~~-~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                      ...| .+|...+.....++.+     .+++++.++||.+.++...... ...  ... ....+.+      ...+.+++|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  221 (251)
T PRK07069        148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------LGRLGEPDD  221 (251)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------CCCCcCHHH
Confidence            2346 6666555554433322     2588999999999887532110 000  011 1111111      123568999


Q ss_pred             HHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          234 IVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       234 ~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++++++.++..+.  ..| .+.+.++
T Consensus       222 va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        222 VAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCC
Confidence            9999999876543  233 4455443

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.2e-15  Score=124.62  Aligned_cols=197  Identities=11%  Similarity=0.048  Sum_probs=130.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCC--hhhHhh-------c
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEE--PQWRDC-------I   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~--~~~~~~-------~   87 (328)
                      .+++|+||||+|+||.+++++|+++|++|++++|++.........     ........+|+.+.  +++.++       +
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            347999999999999999999999999999999988643322110     00111345787652  333332       2


Q ss_pred             -CCCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           88 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        88 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                       ..+|+|||+||....    .+...+.+...+++|+.++..+++++.+.  ..+..+++++||...  .-  +       
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~~--~-------  153 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHG--ET--P-------  153 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccc--cc--C-------
Confidence             468999999996321    23344666778899999988888877552  134568999988543  11  0       


Q ss_pred             CCCCCch-HHHHHHHHHHHHhcccC----CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVNK----DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~~----~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      .+....| .+|...+.....++.+.    ++++.+++||.|.++.....   .      .+      .....+...+|++
T Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---~------~~------~~~~~~~~~~~~~  218 (239)
T PRK08703        154 KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---H------PG------EAKSERKSYGDVL  218 (239)
T ss_pred             CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---C------CC------CCccccCCHHHHH
Confidence            1223457 77777666655544432    58999999999999852110   0      00      1112357899999


Q ss_pred             HHHHHHhhC
Q 020254          236 NLIYEALSN  244 (328)
Q Consensus       236 ~~~~~~~~~  244 (328)
                      .++..++..
T Consensus       219 ~~~~~~~~~  227 (239)
T PRK08703        219 PAFVWWASA  227 (239)
T ss_pred             HHHHHHhCc
Confidence            999999874

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.2e-15  Score=127.10  Aligned_cols=210  Identities=14%  Similarity=0.076  Sum_probs=137.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-----------CCCCccccCceeecCChhhHhhcC--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKKTRFFPGVMIAEEPQWRDCIQ--   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~--   88 (328)
                      ..++++||||+|+||.+++++|+++|++|++++|+........           ..........+|+.+++++.++++  
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999865422110           011111234589999988876654  


Q ss_pred             -----CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccccc
Q 020254           89 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                           ++|+|||+||....   .....+..+..+++|+.++.++++++...  ..+..+++++||...  ...       
T Consensus        85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~~-------  155 (273)
T PRK08278         85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN--LDP-------  155 (273)
T ss_pred             HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh--ccc-------
Confidence                 68999999996432   23345667888999999999999988752  123457888887532  110       


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      ...+....| .+|...+.....++.+   .++.++.+.|+.++...      .....  ..+.     .....+..++|+
T Consensus       156 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~------~~~~~--~~~~-----~~~~~~~~p~~v  222 (273)
T PRK08278        156 KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA------AVRNL--LGGD-----EAMRRSRTPEIM  222 (273)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH------HHHhc--cccc-----ccccccCCHHHH
Confidence            011334567 7787777766655543   37999999998433221      00000  0011     111236788999


Q ss_pred             HHHHHHHhhCCC--CCceEEe
Q 020254          235 VNLIYEALSNPS--YRGVING  253 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g~~~i  253 (328)
                      ++.++.++....  ..|.+.+
T Consensus       223 a~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        223 ADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             HHHHHHHhcCccccceeEEEe
Confidence            999999987644  4454433

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.68  E-value=1.9e-15  Score=128.01  Aligned_cols=213  Identities=15%  Similarity=0.092  Sum_probs=139.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++++||||+|+||.++++.|+++|++|++++|++.......     .....+|+.|+++++++++       ++|+||
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHEN-----YQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCc-----eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3478999999999999999999999999999999876533211     1144679999888776653       589999


Q ss_pred             ECCCCCCC------------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           95 NLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        95 ~~a~~~~~------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      |+||....            .....+.++..+++|+.++..+++++.+.  ..+..++|++||...  +...        
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~--------  152 (266)
T PRK06171         83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG--LEGS--------  152 (266)
T ss_pred             ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc--cCCC--------
Confidence            99996321            12455677889999999999999888753  133457999998764  3211        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC-c-chhhh--------HHHH-HHH-c--CCCCCCC
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-G-ALAKM--------IPLF-MMF-A--GGPLGSG  222 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~-~~~~~--------~~~~-~~~-~--~~~~~~~  222 (328)
                       +....| .+|...+.....++.+   .++++.+++||.+..... . .....        .... ... .  ..|+   
T Consensus       153 -~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---  228 (266)
T PRK06171        153 -EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL---  228 (266)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC---
Confidence             223456 6666655555444332   489999999998852211 0 00000        0000 000 0  1111   


Q ss_pred             CcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          223 QQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       223 ~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                         ..+...+|+|.++..++....  ..| ++++.+|
T Consensus       229 ---~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        229 ---GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             ---CCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence               235778999999999987543  334 6666554

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-15  Score=127.09  Aligned_cols=219  Identities=17%  Similarity=0.079  Sum_probs=139.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc---cCCCCCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+......   .........+..+|+.+.++++++++       ++|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            35799999999999999999999999999999998642111   11111111144678988887776653       689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|||+||....   .....+..+..++.|+.++..+++++...  ..+..++|++||......+          .+....
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~~  154 (263)
T PRK08226         85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA----------DPGETA  154 (263)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC----------CCCcch
Confidence            99999996432   23345566778999999999988886542  1345689999886431011          112235


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh------hhHHHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA------KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      | .+|...+.....++.+   .++++..++||.+.++-.....      ...... ......|+      ..+..++|++
T Consensus       155 Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~va  228 (263)
T PRK08226        155 YALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL------RRLADPLEVG  228 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC------CCCCCHHHHH
Confidence            6 6676666555554433   3799999999999886321100      000111 11122222      1256889999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +++..++....  ..| ++.+.++
T Consensus       229 ~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        229 ELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             HHHHHHcCchhcCCcCceEeECCC
Confidence            99988876432  344 6666555

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3e-15  Score=125.82  Aligned_cols=217  Identities=16%  Similarity=0.099  Sum_probs=138.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      |+++||||+|.||+++++.|+++|++|++++|+.........    .........+|+.|++++.++++       ++|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            689999999999999999999999999999998754332211    01111244678888887776553       6899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      |||++|....   .....+.++..+++|+.++.++++++.+.  .. ...+++++||...  +...         +....
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~  150 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA--WDAG---------PGVIH  150 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh--ccCC---------CCCcc
Confidence            9999985322   24456677889999999999999988541  12 2357888887643  2211         11234


Q ss_pred             h-HHHHHHHHHHHHhcc----cCCCeEEEEEeceEEcCCCc-chhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      | .+|...+.....++.    .+|+++..++||.+.+.... .....-... ......++      ..+...+|++.++.
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~  224 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL------GRLGTPEEIAGLAY  224 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC------CCCCCHHHHHHHHH
Confidence            6 666665555544322    24899999999999854210 000000011 11111111      12678899999999


Q ss_pred             HHhhCCC--CCc-eEEecCCC
Q 020254          240 EALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .++....  ..| ++.+.++.
T Consensus       225 ~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        225 FLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHcCccccccCCCEEEECCCe
Confidence            8876532  334 66666653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.68  E-value=2.9e-15  Score=126.47  Aligned_cols=219  Identities=13%  Similarity=0.013  Sum_probs=136.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-cccc----CC-CCCccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~-~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      .+.++++||||+|.||+++++.|++.|++|+++.|+... ....    .. .........+|+.|+++++++++      
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            345799999999999999999999999999888765332 1111    10 01111244679999888776653      


Q ss_pred             -CCcEEEECCCCCCC---------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc
Q 020254           89 -GSTAVVNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                       ++|++||+|+....         ...........+++|+.+...+...+...  ..+..++|++||...  +..     
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~-----  158 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGN--LVY-----  158 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccc--ccC-----
Confidence             58999999985311         12234566778888888876665554432  134568999999653  211     


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccH
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  231 (328)
                          .+....| .+|...+.....+..+   .|+++.++.||.+-.+............ ......|+      ..+..+
T Consensus       159 ----~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~------~r~~~p  228 (260)
T PRK08416        159 ----IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL------NRMGQP  228 (260)
T ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC------CCCCCH
Confidence                1222356 6777776666555554   3899999999988665311111100001 11111121      125789


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +|++.+++.++....  ..| .+.+.++
T Consensus       229 ~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        229 EDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             HHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence            999999999987543  334 6666554

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.68  E-value=3.9e-15  Score=125.13  Aligned_cols=217  Identities=11%  Similarity=0.048  Sum_probs=141.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      .++++||||+|.||.+++++|++.|++|++++++....  ..+...........+|+.|.++++++++       ++|++
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l   89 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL   89 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            47899999999999999999999999999887764321  1111111111234678988887776664       68999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||+||....   .+...+.+...+++|+.++..+++++...  +.+ ..++|++||...  +....         ....|
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~---------~~~~Y  158 (253)
T PRK08993         90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS--FQGGI---------RVPSY  158 (253)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh--ccCCC---------CCcch
Confidence            999997432   23455778899999999999888887642  122 357999999865  44221         12357


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                       .+|...+.....+..+   .|+++..++||.+..+............ ......|.      .-+...+|++..++.++
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~eva~~~~~l~  232 (253)
T PRK08993        159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA------GRWGLPSDLMGPVVFLA  232 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC------CCCcCHHHHHHHHHHHh
Confidence             6777666665555443   4899999999999876421110000000 11111121      12677899999999999


Q ss_pred             hCCC--CCc-eEEecCC
Q 020254          243 SNPS--YRG-VINGTAP  256 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~  256 (328)
                      ....  ..| ++.+.++
T Consensus       233 s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        233 SSASDYINGYTIAVDGG  249 (253)
T ss_pred             CccccCccCcEEEECCC
Confidence            7643  344 5555443

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=128.52  Aligned_cols=218  Identities=17%  Similarity=0.109  Sum_probs=140.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.++|+||||+|+||.+++++|+++|++|++++|++.......    .......+..+|+.+.+++.++++       +
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34579999999999999999999999999999999865433221    111111134579988887776653       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|+|||+|+....   .....+.....+++|+.++.++++++... .....+++++||...  +..         .+...
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~--~~~---------~~~~~  155 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQA--FVP---------MPMQA  155 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhh--ccC---------CCCcc
Confidence            7999999985322   23345667788899999999999887652 112358999998654  221         12234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHH--HH--HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIP--LF--MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      .| .+|...+.....++.+   .+++++.++|+.+.+....  ..+.+  ..  ......+      ...+...+|++++
T Consensus       156 ~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~  227 (264)
T PRK07576        156 HVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--ARLAPSPELQAAVAQSVP------LKRNGTKQDIANA  227 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH--hhcccCHHHHHHHHhcCC------CCCCCCHHHHHHH
Confidence            56 6666665555444332   4799999999998753210  01110  00  1111111      1235788999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCCC
Q 020254          238 IYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++.++..+.  ..| .+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        228 ALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHcChhhcCccCCEEEECCCc
Confidence            999997543  344 55555553

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=4.7e-15  Score=124.54  Aligned_cols=218  Identities=13%  Similarity=0.014  Sum_probs=140.5

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhc-------CCCc
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGST   91 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d   91 (328)
                      +.++++||||+  +.||++++++|+++|++|++.+|+.......... ........+|+.|++++++++       .++|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999  7999999999999999999998873221111110 011124568999988877655       3589


Q ss_pred             EEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ++||+||....       .+...+.++..+++|+.++..+..++........++|++||.+.  ...         .+..
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~--~~~---------~~~~  154 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS--ERA---------IPNY  154 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc--ccc---------CCcc
Confidence            99999996421       23445677888999999998888887763223367899988653  111         1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHH-HcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|.........++.+   .|+++.++.||.|-.+........-..... ....|.      ..+..++|+++++.
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~~~  228 (252)
T PRK06079        155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD------GVGVTIEEVGNTAA  228 (252)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc------cCCCCHHHHHHHHH
Confidence            456 6777666666555443   489999999999977632111000011111 111121      22678899999999


Q ss_pred             HHhhCCC--CCc-eEEecCC
Q 020254          240 EALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~  256 (328)
                      .++....  ..| ++.+.++
T Consensus       229 ~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        229 FLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHhCcccccccccEEEeCCc
Confidence            9987543  334 6655554

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.9e-15  Score=127.86  Aligned_cols=202  Identities=16%  Similarity=0.144  Sum_probs=132.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhc------CCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCI------QGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~------~~~d~   92 (328)
                      +.++|+||||+|+||.+++++|+++|++|++++|++.........   .....+..+|+.|.+.+.+++      .++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            346899999999999999999999999999999987654332111   111124467998888776554      36899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+||....   .....+.....++.|+.++.++++++...  ..+..+++++||... .++.          +....|
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~----------~~~~~Y  152 (263)
T PRK09072         84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFG-SIGY----------PGYASY  152 (263)
T ss_pred             EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhh-CcCC----------CCccHH
Confidence            9999997432   22344566788899999999998887642  123457888887653 1331          122346


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|.........+..   ..++.++++.||.+.++....   ...        .... .....+..++|+|+.++.+++
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~---~~~--------~~~~-~~~~~~~~~~~va~~i~~~~~  220 (263)
T PRK09072        153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE---AVQ--------ALNR-ALGNAMDDPEDVAAAVLQAIE  220 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh---hcc--------cccc-cccCCCCCHHHHHHHHHHHHh
Confidence             566554444433332   247999999999886653211   000        0000 001135788999999999999


Q ss_pred             CCC
Q 020254          244 NPS  246 (328)
Q Consensus       244 ~~~  246 (328)
                      +..
T Consensus       221 ~~~  223 (263)
T PRK09072        221 KER  223 (263)
T ss_pred             CCC
Confidence            754

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.6e-15  Score=129.79  Aligned_cols=178  Identities=13%  Similarity=0.010  Sum_probs=114.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CCC--CCccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ...++|+||||+|+||.+++++|+++|++|++++|+..+....    ...  .....+..+|+.|.++++++++      
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            3457999999999999999999999999999999986543221    100  0111244679999888776653      


Q ss_pred             -CCcEEEECCCCCCCC-CCChhHHHHHHHhhhhh----HHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCC--
Q 020254           89 -GSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES--  160 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~-~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~--  160 (328)
                       ++|+|||+||..... ....+..+..+++|+.+    +..+++.+++  .+..++|++||.+...|+..........  
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~--~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  171 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP--VPGSRVVTVSSGGHRIRAAIHFDDLQWERR  171 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh--CCCCEEEEECCHHHhccCCCCccccCcccC
Confidence             589999999964321 22334557778999999    5555655555  4567999999987522332111111111  


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEE--EEEeceEEcCC
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLA--LIRIGIVLGKD  200 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~--ilRp~~v~g~~  200 (328)
                      .++...| .+|...+.....++.+   .++++.  .+.||.|..+-
T Consensus       172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            1223457 7777766666554433   355544  44799887664

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.68  E-value=4.4e-15  Score=125.73  Aligned_cols=219  Identities=13%  Similarity=0.068  Sum_probs=143.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..++++||||+|.||.+++++|+++|++|++++|+..+......    .........+|+.|.+++++++.       ++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            34789999999999999999999999999999988765432211    11111234689999888776663       58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||....   .....+.....+++|+.++..+..++...  ..+..++|++||.... ++.          +...
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~  157 (265)
T PRK07097         89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE-LGR----------ETVS  157 (265)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc-CCC----------CCCc
Confidence            999999997432   23455777888899999988777766542  1356789999986531 332          1234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh------hHHHHHHH-cCCCCCCCCcccccccHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK------MIPLFMMF-AGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~i~v~D~  234 (328)
                      .| .+|...+.....++.+   .++.++.++||.+.++.......      ..+..... ...+      ...+...+|+
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dv  231 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------AARWGDPEDL  231 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------ccCCcCHHHH
Confidence            56 6676666555554443   48999999999998874321110      00000101 1111      1235678999


Q ss_pred             HHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          235 VNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      |..++.++....  ..| .+.+.++.
T Consensus       232 a~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        232 AGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999988643  334 66666553

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.67  E-value=8e-15  Score=122.78  Aligned_cols=215  Identities=16%  Similarity=0.096  Sum_probs=134.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+.++||||+|+||++++++|+++|++|++..++. .......    ..........+|+.|.+++.++++       ++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999998865432 2211111    111111123578888887766653       68


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||....   .....+.++..+++|+.++..+.+++...  ..+..++|++||.... ++.          +...
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~  151 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-KGQ----------FGQT  151 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc-CCC----------CCCh
Confidence            999999997432   23345677888999999977766655431  1456789999986541 221          1234


Q ss_pred             ch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....+..   ..++++++++||.+.++..... .....  ......+      ...+..++|++.++..
T Consensus       152 ~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~v~~~~~~  223 (246)
T PRK12938        152 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE--KIVATIP------VRRLGSPDEIGSIVAW  223 (246)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHH--HHHhcCC------ccCCcCHHHHHHHHHH
Confidence            56 566655444433332   2489999999999987743211 11111  1111111      1235678999999999


Q ss_pred             HhhCCC--CCc-eEEecCC
Q 020254          241 ALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~  256 (328)
                      ++..+.  ..| .+.+.++
T Consensus       224 l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        224 LASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HcCcccCCccCcEEEECCc
Confidence            886543  233 6666554

>PRK06484 short chain dehydrogenase; Validated

Probab=99.67  E-value=2e-15  Score=140.09  Aligned_cols=219  Identities=16%  Similarity=0.121  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..++++||||+|.||.++++.|+++|++|++++|+..+........ .......+|+.|++++.++++       .+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4579999999999999999999999999999999875543332211 111134679999988876663       58999


Q ss_pred             EECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           94 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        94 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      ||+||....    .....+.++..+++|+.++..+++++.....+..++|++||...  +..         .+....| .
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a  416 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS--LLA---------LPPRNAYCA  416 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh--cCC---------CCCCchhHH
Confidence            999996421    23445677889999999999999887763223468999999765  321         1233467 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh-HHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      +|...+.....+..+   .|+++++++||.+.++........ .... ......+++      .+..++|+|++++.++.
T Consensus       417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~dia~~~~~l~s  490 (520)
T PRK06484        417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLG------RLGDPEEVAEAIAFLAS  490 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhC
Confidence            787777666655543   389999999999987742111000 0001 111122221      25789999999999987


Q ss_pred             CCC--CCc-eEEecCCC
Q 020254          244 NPS--YRG-VINGTAPN  257 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~~  257 (328)
                      ...  ..| ++.+.++.
T Consensus       491 ~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        491 PAASYVNGATLTVDGGW  507 (520)
T ss_pred             ccccCccCcEEEECCCc
Confidence            543  344 77776653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.67  E-value=7.6e-15  Score=122.58  Aligned_cols=213  Identities=17%  Similarity=0.117  Sum_probs=134.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CcccccC----CCCCccccCceeecCChhhHhhcC-------CCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.+|||||+|+||.+++++|+++|++|+++.|+. .......    ..........+|+.|++++.++++       ++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            4799999999999999999999999999998832 2211110    001111144578888887765553       589


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|||++|....   .....+.+...++.|+.++..+++++    ++  .+.+++|++||.... ++.          +..
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~iss~~~~-~~~----------~~~  147 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE--RGWGRIINISSVNGQ-KGQ----------FGQ  147 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEcchhhc-CCC----------CCc
Confidence            99999986432   23344667788899999977755544    44  456789999986531 221          122


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....++.   ..+++++.++||.+.++..... ......  .....++.      .+...+|+++++.
T Consensus       148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~a~~~~  219 (242)
T TIGR01829       148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNS--IVAQIPVG------RLGRPEEIAAAVA  219 (242)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHH--HHhcCCCC------CCcCHHHHHHHHH
Confidence            346 566544444333322   2489999999999988753221 111111  11122221      2456789999998


Q ss_pred             HHhhCCC---CCceEEecCCC
Q 020254          240 EALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~  257 (328)
                      .++..+.   .+..+.+.++.
T Consensus       220 ~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       220 FLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HHcCchhcCccCCEEEecCCc
Confidence            8876543   23377777663

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.6e-15  Score=125.67  Aligned_cols=218  Identities=16%  Similarity=0.051  Sum_probs=136.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----C--CCccccCceeecCChhhHhhc-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCI-------Q   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~~-------~   88 (328)
                      +.++++||||+|+||.++++.|+++|++|++++|++.+......    .  ........+|+.|.+++.+++       .
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            34789999999999999999999999999999998765332211    0  001113457999988776654       3


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||....   .....+.+...+++|+.+...+++++...  +.+..++|++||...  +...         +.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  155 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLA--LQPE---------PH  155 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccc--cCCC---------CC
Confidence            58999999996432   22344567788889988876666655432  134568999999764  3221         12


Q ss_pred             CCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcc-hh-------hhHHHHHH---HcCCCCCCCCccccc
Q 020254          164 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LA-------KMIPLFMM---FAGGPLGSGQQWFSW  228 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~-------~~~~~~~~---~~~~~~~~~~~~~~~  228 (328)
                      ...| .+|.........++.   ..|++++.++||.+..+.... +.       .+......   ....|+      ..+
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~  229 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL------GRL  229 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc------CCC
Confidence            2345 556554444433332   248999999999997763110 00       00000000   011111      125


Q ss_pred             ccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          229 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ...+|++.++..++....  ..| ++.+.++
T Consensus       230 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        230 GRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             CCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            678999999999887532  334 6777655

>TIGR02415 23BDH acetoin reductases

Probab=99.67  E-value=1.6e-15  Score=127.71  Aligned_cols=218  Identities=18%  Similarity=0.100  Sum_probs=135.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ++++||||+|+||.+++++|++.|++|++++|+........    ..........+|+.|++++.+++.       ++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999865432221    111111234579999888776653       5799


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      |||+++....   .....+..+..+++|+.++..+++++.+.  ..+ ..++|++||... .++.          +....
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~----------~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAG-HEGN----------PILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhh-cCCC----------CCCcc
Confidence            9999986432   13345667788999999988777665431  022 368899888654 1332          12345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCC-------CCCcccccccHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG-------SGQQWFSWIHLDDIV  235 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~v~D~a  235 (328)
                      | .+|...+.....+..+   .++.+.+++||.+..+...   .+........+.+++       .......+..++|++
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  226 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE---EIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVA  226 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh---hhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHH
Confidence            6 6666665555443332   3799999999988665311   111100000001100       000112368889999


Q ss_pred             HHHHHHhhCCC--CCceEEecC
Q 020254          236 NLIYEALSNPS--YRGVINGTA  255 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g~~~i~~  255 (328)
                      +++..++....  ..|.+...+
T Consensus       227 ~~~~~l~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       227 GLVSFLASEDSDYITGQSILVD  248 (254)
T ss_pred             HHHHhhcccccCCccCcEEEec
Confidence            99999998754  345444333

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.1e-15  Score=127.65  Aligned_cols=165  Identities=13%  Similarity=0.123  Sum_probs=115.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-----------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------~~d   91 (328)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+... ...........+|+.|.+++++++.           ++|
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLA-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhh-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            5799999999999999999999999999999998653211 1111111244689999887776331           579


Q ss_pred             EEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      ++||+++....    .....+.+...+++|+.++..+.+.+.+.  ..+.+++|++||...  +...         +...
T Consensus        80 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~  148 (243)
T PRK07023         80 LLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAA--RNAY---------AGWS  148 (243)
T ss_pred             EEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhh--cCCC---------CCch
Confidence            99999986422    12345667888899999977666655432  145578999999765  4321         1234


Q ss_pred             ch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcC
Q 020254          166 DY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGK  199 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~  199 (328)
                      .| .+|...+.....+..+  .++++.+++||.+-.+
T Consensus       149 ~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        149 VYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            56 7777777766655433  4899999999988554

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=129.18  Aligned_cols=209  Identities=15%  Similarity=0.137  Sum_probs=137.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhc-------CCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCI-------QGST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~-------~~~d   91 (328)
                      ..++|+||||+|.||.++++.|.+.|++|++++|+...........   .......+|+.|.+++++++       .++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4578999999999999999999999999999999876543322111   11112247999988777655       3689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +|||+||....   .....+..+..+++|+.++..+++++... .....++|++||...  +...         +....|
T Consensus        88 ~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  156 (296)
T PRK05872         88 VVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAA--FAAA---------PGMAAY  156 (296)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhh--cCCC---------CCchHH
Confidence            99999997432   23345667888999999999999887642 123358999999765  4322         223456


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHH-cCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                       .+|...+.....+..+   .|+.++++.||.+..+............... ...+.    ....++.++|++++++.++
T Consensus       157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~va~~i~~~~  232 (296)
T PRK05872        157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW----PLRRTTSVEKCAAAFVDGI  232 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC----cccCCCCHHHHHHHHHHHH
Confidence             6676666655544332   4899999999998766321110000111111 11110    1123678999999999998


Q ss_pred             hCC
Q 020254          243 SNP  245 (328)
Q Consensus       243 ~~~  245 (328)
                      ...
T Consensus       233 ~~~  235 (296)
T PRK05872        233 ERR  235 (296)
T ss_pred             hcC
Confidence            864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=7.2e-15  Score=124.59  Aligned_cols=219  Identities=12%  Similarity=0.072  Sum_probs=140.2

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.+.+|||||++  .||.++++.|++.|++|++.+|+....   ..+...........+|+.|.++++++++       +
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999997  999999999999999999998864321   1111110101134689999988876653       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+||....       .+...+.+...+++|+.++..+++++...-....++|++||.+.  ...         .|
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~--~~~---------~~  154 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS--TRV---------MP  154 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc--ccc---------CC
Confidence            8999999996421       13445778888999999999888877653112357999988653  211         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHH-cCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|.........++.+   .|+++..|.||.+-.+............... ...|++      .+..++|+|++
T Consensus       155 ~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~------r~~~peeva~~  228 (271)
T PRK06505        155 NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLR------RTVTIDEVGGS  228 (271)
T ss_pred             ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcc------ccCCHHHHHHH
Confidence            23456 6776666655554443   4899999999999776321110100011111 111221      24678999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCCC
Q 020254          238 IYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++.++....  ..| ++.+.++.
T Consensus       229 ~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        229 ALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHhCccccccCceEEeecCCc
Confidence            999987533  344 66666653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.4e-14  Score=119.36  Aligned_cols=192  Identities=15%  Similarity=0.097  Sum_probs=133.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc---C--CCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---Q--GSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~--~~d~vi~~a   97 (328)
                      |++++||||+|+||++++++|++.|++|++++|++...........  ....+|+.+.+.+++++   .  ++|+|||++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGA--EALALDVADPASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccc--eEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence            4689999999999999999999999999999998765443322111  14568999988887753   2  589999999


Q ss_pred             CCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      +....     .....+.++..++.|+.++.++++++.+. .....+++++||... .++....       .+...| .+|
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~-~~~~~~~-------~~~~~Y~~sK  150 (222)
T PRK06953         79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMG-SIGDATG-------TTGWLYRASK  150 (222)
T ss_pred             CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccc-ccccccC-------CCccccHHhH
Confidence            97521     12356677889999999999999988752 122346888888643 1442211       111246 777


Q ss_pred             HHHHHHHHHhcccC-CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          171 VCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       171 ~~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      ...+.....+..+. +++++.++||.+..+...                  .    ...+..++.++.+..++....
T Consensus       151 ~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------------~----~~~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        151 AALNDALRAASLQARHATCIALHPGWVRTDMGG------------------A----QAALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------------C----CCCCCHHHHHHHHHHHHHhcC
Confidence            76666665554433 789999999998776311                  0    113677888888888876543

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.5e-15  Score=122.84  Aligned_cols=199  Identities=11%  Similarity=0.093  Sum_probs=135.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC----CCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~~   99 (328)
                      |+++||||+|.||+++++.|+++|++|++++|+..+......... .....+|+.|.++++++++    ++|++||+++.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~   79 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD-VDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP   79 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence            579999999999999999999999999999998765433221111 1144579999888877764    58999999974


Q ss_pred             CCC---C---CC--ChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254          100 PIG---T---RW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus       100 ~~~---~---~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      ...   .   ..  ..+.++..+++|+.++..+++++...-....++|++||...               +....| .+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y~asK  144 (223)
T PRK05884         80 SWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAEAAIK  144 (223)
T ss_pred             cccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCccccHHHH
Confidence            211   0   01  24567888999999999999988763122367999988531               112457 677


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC-
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  246 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  246 (328)
                      .........++.+   .++++..+.||.+..+..          ......|         .-.++|+++++..++.... 
T Consensus       145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~~~~p---------~~~~~~ia~~~~~l~s~~~~  205 (223)
T PRK05884        145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGLSRTP---------PPVAAEIARLALFLTTPAAR  205 (223)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhccCCC---------CCCHHHHHHHHHHHcCchhh
Confidence            6666665555443   479999999999865421          0000111         1278999999999887543 


Q ss_pred             -CCc-eEEecCCC
Q 020254          247 -YRG-VINGTAPN  257 (328)
Q Consensus       247 -~~g-~~~i~~~~  257 (328)
                       ..| ++.+.+|.
T Consensus       206 ~v~G~~i~vdgg~  218 (223)
T PRK05884        206 HITGQTLHVSHGA  218 (223)
T ss_pred             ccCCcEEEeCCCe
Confidence             334 66665554

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1e-14  Score=121.47  Aligned_cols=189  Identities=13%  Similarity=0.105  Sum_probs=125.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|+............ .....+|+.|.+++.+.+.++|++||+||...
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~   91 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESP-NEWIKWECGKEESLDKQLASLDVLILNHGINP   91 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccCC
Confidence            34789999999999999999999999999999998632111111110 11345799999999888889999999999744


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC---CCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINES--PE---GVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  175 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~---~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  175 (328)
                      ......+++...+++|+.++..+++++...  +.   +...++..||.+.  ...          +..+.| .+|.....
T Consensus        92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~--~~~----------~~~~~Y~aSKaal~~  159 (245)
T PRK12367         92 GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE--IQP----------ALSPSYEISKRLIGQ  159 (245)
T ss_pred             cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc--cCC----------CCCchhHHHHHHHHH
Confidence            444556788899999999999999987652  11   1222334444322  221          112457 66665432


Q ss_pred             HHHH------hcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          176 EGTA------LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       176 ~~~~------~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      ....      .....++.+..+.||.+..+-.                +       ...+..+|+|+.++.++.+..
T Consensus       160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~----------------~-------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        160 LVSLKKNLLDKNERKKLIIRKLILGPFRSELN----------------P-------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHhhcccccEEEEecCCCcccccC----------------c-------cCCCCHHHHHHHHHHHHhcCC
Confidence            2211      1123577888888876533210                0       125788999999999998754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.66  E-value=6.5e-15  Score=124.28  Aligned_cols=217  Identities=15%  Similarity=0.081  Sum_probs=134.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhc-------CCCcEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCI-------QGSTAV   93 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~-------~~~d~v   93 (328)
                      |+++||||+|.||++++++|+++|++|++++|++....+....   ........+|+.|++++++++       .++|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999999999999999987543222110   011124468999988877665       368999


Q ss_pred             EECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           94 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        94 i~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      ||+||....     .+...+.+...+.+|+.++..+...+...   ..+..++|++||...  +..         .+...
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~  149 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSV--KEP---------MPPLV  149 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCccc--CCC---------CCCch
Confidence            999996421     12223445556677877765544433210   134568999999765  321         12234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhH-------HH--H-HHHcCCCCCCCCccccccc
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMI-------PL--F-MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~-------~~--~-~~~~~~~~~~~~~~~~~i~  230 (328)
                      .| .+|.........++.+   .|+.+..+.||.+-.+.... .....       ..  . ......|+      ..+..
T Consensus       150 ~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~  223 (259)
T PRK08340        150 LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL------KRTGR  223 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCc------cCCCC
Confidence            56 6676666655555443   47999999999987764211 00000       00  0 00111111      22678


Q ss_pred             HHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          231 LDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++|+|+++..++....  ..| +..+.++.
T Consensus       224 p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        224 WEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             HHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            8999999999987543  344 66666654

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.66  E-value=8.4e-15  Score=123.83  Aligned_cols=215  Identities=15%  Similarity=0.043  Sum_probs=140.0

Q ss_pred             CCCeEEEEcCCc-hhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----C-CccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ..++++||||+| .||+++++.|+++|++|++++|+..+.......     . .......+|+.+.++++++++      
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999997 699999999999999999999876543322110     0 011134578888887776553      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                       ++|+|||++|....   .....+.+...++.|+.++..+++++...  ..+ ...++++||...  +..         .
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~  164 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLG--WRA---------Q  164 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh--cCC---------C
Confidence             68999999996422   23334667788899999998888876542  122 456778777543  211         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch--hhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      +....| .+|...+.....++.+   .++++.+++||.+..+.....  ......  .....++      ..+..++|++
T Consensus       165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~--~~~~~~~------~r~~~p~~va  236 (262)
T PRK07831        165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDE--LAAREAF------GRAAEPWEVA  236 (262)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHH--HHhcCCC------CCCcCHHHHH
Confidence            223457 7787777776655543   589999999999988742211  111111  1112222      2256789999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecC
Q 020254          236 NLIYEALSNPS--YRG-VINGTA  255 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~  255 (328)
                      ++++.++....  ..| ++.+.+
T Consensus       237 ~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        237 NVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHHHcCchhcCcCCceEEeCC
Confidence            99999887643  334 555544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.65  E-value=3.9e-15  Score=125.94  Aligned_cols=218  Identities=19%  Similarity=0.099  Sum_probs=139.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.++++||||+|+||++++++|+++|++|++++|++.......... .......+|+.|.++++++++       ++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4578999999999999999999999999999999876543332111 011144579988887766553       68999


Q ss_pred             EECCCCCCC-C---CCChh----HHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           94 VNLAGTPIG-T---RWSSE----IKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        94 i~~a~~~~~-~---~~~~~----~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ||+||.... .   ....+    .++..+++|+.++..+++++... .....++|++||...  +...         +..
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~  153 (263)
T PRK06200         85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSS--FYPG---------GGG  153 (263)
T ss_pred             EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhh--cCCC---------CCC
Confidence            999996421 1   11222    25667889999988888887652 122357999998765  4321         122


Q ss_pred             Cch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcc--h---hhh---HH-HHHH-HcCCCCCCCCcccccccH
Q 020254          165 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGA--L---AKM---IP-LFMM-FAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~--~---~~~---~~-~~~~-~~~~~~~~~~~~~~~i~v  231 (328)
                      ..| .+|...+.....++.+  .++++..+.||.+..+-...  .   ...   .+ .... ....|+      ..+...
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~~  227 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL------QFAPQP  227 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC------CCCCCH
Confidence            357 7777666666555443  25899999999997653110  0   000   00 0011 111111      236788


Q ss_pred             HHHHHHHHHHhhCC-C--CCc-eEEecCC
Q 020254          232 DDIVNLIYEALSNP-S--YRG-VINGTAP  256 (328)
Q Consensus       232 ~D~a~~~~~~~~~~-~--~~g-~~~i~~~  256 (328)
                      +|++++++.++... .  ..| ++.+.+|
T Consensus       228 ~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        228 EDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             HHHhhhhhheecccccCcccceEEEEcCc
Confidence            99999999998755 3  334 6677655

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.65  E-value=8.6e-15  Score=124.43  Aligned_cols=204  Identities=15%  Similarity=0.093  Sum_probs=130.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCc-cccCceeecCChhhHhhcC-------CCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKT-RFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~-~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      |+++||||+|.||.++++.|+++|++|++++|++.......    ..... .....+|+.|++++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47999999999999999999999999999999865432221    10110 1123579988877665443       589


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||++|....   .....+..+..+++|+.++..+++++...   .....++|++||...  +..         .+...
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~--~~~---------~~~~~  149 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG--LVA---------LPWHA  149 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc--cCC---------CCCCc
Confidence            99999986422   23455677888999999999999987531   023468999998754  211         12223


Q ss_pred             ch-HHHHHHHHHHHHhc---ccCCCeEEEEEeceEEcCCCcchh-----hhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          166 DY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALA-----KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      .| .+|...+.......   ...++++++++||.+.++......     .-.........      ......+..+|+|+
T Consensus       150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~vA~  223 (272)
T PRK07832        150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD------RFRGHAVTPEKAAE  223 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH------hcccCCCCHHHHHH
Confidence            45 55554444333322   235899999999999887421110     00000000000      00123589999999


Q ss_pred             HHHHHhhC
Q 020254          237 LIYEALSN  244 (328)
Q Consensus       237 ~~~~~~~~  244 (328)
                      +++.++.+
T Consensus       224 ~~~~~~~~  231 (272)
T PRK07832        224 KILAGVEK  231 (272)
T ss_pred             HHHHHHhc
Confidence            99999965

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.65  E-value=4.2e-15  Score=140.64  Aligned_cols=224  Identities=17%  Similarity=0.123  Sum_probs=140.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----C-CccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ..++||||||+|+||++++++|+++|++|++++|+..........     . .......+|+.|.+++.++++       
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999986543322110     0 011134679999988877764       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|+|||+||.....   ......+...+++|+.+...+...+...  ..+ ..++|++||.... ++.          +
T Consensus       493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~-~~~----------~  561 (676)
T TIGR02632       493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV-YAG----------K  561 (676)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc-CCC----------C
Confidence            689999999974322   2345667788889998877665444321  022 3579999996541 332          1


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEE-cCCCcchhhhHHHHHHHcCCC-------CCCCCccccccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIH  230 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~  230 (328)
                      ....| .+|...+.....++.+   .|+++..++|+.|+ |.+... ..+........+..       .........+++
T Consensus       562 ~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~  640 (676)
T TIGR02632       562 NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWD-GEWREERAAAYGIPADELEEHYAKRTLLKRHIF  640 (676)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccc-ccchhhhhhcccCChHHHHHHHHhcCCcCCCcC
Confidence            23457 7777776666555443   47999999999987 332100 00000000000000       001111234688


Q ss_pred             HHHHHHHHHHHhhCCC--C-CceEEecCCC
Q 020254          231 LDDIVNLIYEALSNPS--Y-RGVINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~--~-~g~~~i~~~~  257 (328)
                      ++|+|+++..++....  . +.++++.+|.
T Consensus       641 peDVA~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       641 PADIAEAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             HHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence            9999999999876432  2 3488887765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=1.4e-14  Score=122.15  Aligned_cols=218  Identities=12%  Similarity=0.027  Sum_probs=139.0

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCChhhHhhc-------CC
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      ..+.++||||+  +.||.+++++|+++|++|++++|+....   .+............+|+.|.+++++++       .+
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            35789999998  5999999999999999999999875421   111111111124568999988877665       35


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++|||||....       .+...+.++..+++|+.++..+++++...-....+++++||.+.  ...         .+
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~--~~~---------~~  157 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA--EKV---------VE  157 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc--ccC---------Cc
Confidence            8999999996421       23455778899999999999998877653122357888888543  110         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|.........++.+   .++++..+.||.+-.+-.......-... ......|+      ..+..++|++.+
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~  231 (258)
T PRK07533        158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL------RRLVDIDDVGAV  231 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc------CCCCCHHHHHHH
Confidence            23456 6676665555444432   4899999999998765311110011111 11112222      125788999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCC
Q 020254          238 IYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++.++....  ..| .+.+.++
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        232 AAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHhChhhccccCcEEeeCCc
Confidence            999987532  334 6655544

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=1.5e-14  Score=122.01  Aligned_cols=218  Identities=15%  Similarity=0.080  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++++||||++  .||+++++.|+++|++|++.+|+..   ...++...........+|+.|+++++++++       +
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            347899999985  8999999999999999998888632   111111111111244689999988876663       5


Q ss_pred             CcEEEECCCCCCCC--------CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      +|++||+||.....        ....+.++..+++|+.++..+.+++........++|++||.+.  ...         .
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~--~~~---------~  153 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ERA---------I  153 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC--CCC---------C
Confidence            89999999964221        1234566778899999988888776543112357888888643  111         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHH-HcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....++.+   .++++.++.||.+..+.............. ....|+      ..+..++|++.
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~  227 (262)
T PRK07984        154 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIEDVGN  227 (262)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC------cCCCCHHHHHH
Confidence            223457 7777776666555543   489999999999876421100011011111 111122      22578899999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +++.++....  ..| ++.+.++
T Consensus       228 ~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        228 SAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHcCcccccccCcEEEECCC
Confidence            9999987533  344 6666555

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=8.4e-15  Score=124.28  Aligned_cols=218  Identities=12%  Similarity=0.056  Sum_probs=139.8

Q ss_pred             CCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+.++||||+  +.||+++++.|+++|++|++.+|+..   ................+|+.|.++++++++       ++
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999997  79999999999999999999988742   111111110101245689999988776653       68


Q ss_pred             cEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |++||+||....       .+...+.++..+++|+.++..+.+++...-....++|++||.+.  ...         .+.
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~--~~~---------~~~  153 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG--VKY---------VPH  153 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC--ccC---------CCc
Confidence            999999996421       23456778889999999998888877763122358999998643  211         122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHH-cCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|.........++.+   .|+++.++.||.+..+............... ...|+      .-+..++|++.++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl------~r~~~pedva~~v  227 (274)
T PRK08415        154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL------KKNVSIEEVGNSG  227 (274)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch------hccCCHHHHHHHH
Confidence            3456 6776666665555443   4899999999998765211100000000000 11121      1257789999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++....  ..| .+.+.+|.
T Consensus       228 ~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHhhhhhhcccccEEEEcCcc
Confidence            99987532  344 66666653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.65  E-value=5e-15  Score=124.42  Aligned_cols=205  Identities=10%  Similarity=0.050  Sum_probs=129.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccCCC-CCccccCceeecCChhhHhhcCC-----------
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-KKTRFFPGVMIAEEPQWRDCIQG-----------   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~-----------   89 (328)
                      ||+|+||||+|+||++++++|+++|++|++++|++.+ ....... ........+|+.+.++++++++.           
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            4689999999999999999999999999999998732 1111111 11112446899998888776642           


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      .+++||++|....    .....+.....+++|+.++..+++.+...  .. +.+++|++||...  +..         .+
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~  149 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA--KNP---------YF  149 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh--cCC---------CC
Confidence            1278999986321    23455677788889999866666555432  12 3457999999754  221         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcch----hhhHHHHH-HHcCCCCCCCCcccccccH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGAL----AKMIPLFM-MFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~i~v  231 (328)
                      ....| .+|...+.....++.+     .++++..++||.+-.+.....    ........ .....+      ...+..+
T Consensus       150 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  223 (251)
T PRK06924        150 GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKE------EGKLLSP  223 (251)
T ss_pred             CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhh------cCCcCCH
Confidence            33457 7777666665544432     478999999998875531100    00000000 000001      1125889


Q ss_pred             HHHHHHHHHHhhC
Q 020254          232 DDIVNLIYEALSN  244 (328)
Q Consensus       232 ~D~a~~~~~~~~~  244 (328)
                      +|+|+.++.++..
T Consensus       224 ~dva~~~~~l~~~  236 (251)
T PRK06924        224 EYVAKALRNLLET  236 (251)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999986

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=1.3e-14  Score=122.46  Aligned_cols=219  Identities=13%  Similarity=0.064  Sum_probs=136.3

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||  ++.||+++++.|+++|++|++..|.....   .++...........+|+.|+++++++++       +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3478999997  67999999999999999999887753211   1111111111234689999988876663       6


Q ss_pred             CcEEEECCCCCCCC--------CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           90 STAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        90 ~d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      +|++|||||.....        ....+.++..+++|+.++..+.+++... .....++|++||.+.  +..         
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~--~~~---------  153 (261)
T PRK08690         85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGA--VRA---------  153 (261)
T ss_pred             CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccc--ccC---------
Confidence            89999999975321        1233456777889999887777765542 122357888887654  211         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      .|....| .+|.........++.   ..|+++..+.||.+-.+-............ .....|+      ..+..++|+|
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peevA  227 (261)
T PRK08690        154 IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL------RRNVTIEEVG  227 (261)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC------CCCCCHHHHH
Confidence            1223456 667666655544432   248999999999997653111100001111 1111122      2267899999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +++..++....  ..| ++.+.+|.
T Consensus       228 ~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        228 NTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHhCcccCCcceeEEEEcCCc
Confidence            99999998643  344 66665553

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=3.6e-15  Score=124.24  Aligned_cols=211  Identities=16%  Similarity=0.107  Sum_probs=134.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .++|+||||+|+||+++++.|++.|++|++++|++.+.......   ........+|+.+.+.++++++       ++|.
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46999999999999999999999999999999987654332110   0011244678988887766553       4699


Q ss_pred             EEECCCCCCCC-CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           93 VVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        93 vi~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      ++|+++..... ....+.....++.|+.++..+++.+.+......++|++||.... ++.         .+....| .+|
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~~---------~~~~~~Y~~sK  154 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGI-YKA---------SPDQLSYAVAK  154 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhc-ccC---------CCCchHHHHHH
Confidence            99999853221 11224456677899999888888776631223578888886531 221         1222346 666


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC-
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  246 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  246 (328)
                      ...+.....+...   .+++++++||++++++....  .   .+...  .+.     ....+..+|+++.++.++..+. 
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~--~---~~~~~--~~~-----~~~~~~~~~va~~~~~~~~~~~~  222 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE--R---NWKKL--RKL-----GDDMAPPEDFAKVIIWLLTDEAD  222 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch--h---hhhhh--ccc-----cCCCCCHHHHHHHHHHHhccccc
Confidence            6555444333322   48999999999999874211  0   00000  000     1135778999999999987643 


Q ss_pred             -CCc-eEEecC
Q 020254          247 -YRG-VINGTA  255 (328)
Q Consensus       247 -~~g-~~~i~~  255 (328)
                       ..| .+.+.+
T Consensus       223 ~~~g~~~~~~~  233 (238)
T PRK05786        223 WVDGVVIPVDG  233 (238)
T ss_pred             CccCCEEEECC
Confidence             234 555543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=1.2e-14  Score=122.46  Aligned_cols=214  Identities=15%  Similarity=0.036  Sum_probs=137.2

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcc---------------cccCCCCCccccCceeecCChhhH
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---------------ELIFPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      ++++|+||||+|  .||.+++++|+++|++|++++|++.+.               ...........+..+|+.+.+++.
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   83 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN   83 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            346899999996  699999999999999999999873211               000000111124467888888776


Q ss_pred             hhcC-------CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCC
Q 020254           85 DCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTS  152 (328)
Q Consensus        85 ~~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~  152 (328)
                      ++++       ++|+|||+||.....   ....+..+..+.+|+.++..+++++...  .....++|++||...  +++.
T Consensus        84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~~~~  161 (256)
T PRK12748         84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS--LGPM  161 (256)
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc--cCCC
Confidence            5543       589999999864322   2334567788999999999999888642  123468999998765  4422


Q ss_pred             CcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCccccc
Q 020254          153 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  228 (328)
Q Consensus       153 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (328)
                      .         ....| .+|...+.....++.+   .+++++.++||.+..+....  .....+  ....+.      ..+
T Consensus       162 ~---------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--~~~~~~--~~~~~~------~~~  222 (256)
T PRK12748        162 P---------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--ELKHHL--VPKFPQ------GRV  222 (256)
T ss_pred             C---------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--hHHHhh--hccCCC------CCC
Confidence            1         12356 6777666665544332   48999999999887653210  111111  011111      123


Q ss_pred             ccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          229 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ...+|+++++..++....  ..| ++++.++
T Consensus       223 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        223 GEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            557999999998887533  234 7777655

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=1.5e-14  Score=122.06  Aligned_cols=219  Identities=13%  Similarity=0.069  Sum_probs=139.4

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||  ++.||.++++.|++.|++|++.+|...   ....+...........+|+.|+++++++++       +
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            3478999996  679999999999999999998765421   111111111111134689999998876663       6


Q ss_pred             CcEEEECCCCCCC--------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      +|++||+||....        .....+.++..+++|+.++..+.+++...-....++|++||...  ...         .
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~--~~~---------~  153 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA--ERV---------V  153 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc--ccC---------C
Confidence            8999999997432        12345677888999999999888887764223367999998653  111         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHH-HcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|.........++.+   .++++..+.||.+-.+-.......-..... ....|+      ..+..++|+++
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~  227 (260)
T PRK06997        154 PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL------RRNVTIEEVGN  227 (260)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc------cccCCHHHHHH
Confidence            223457 7777766665555443   489999999999876421111000000111 111121      12578999999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++..++....  ..| ++.+.++.
T Consensus       228 ~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        228 VAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHhCccccCcceeEEEEcCCh
Confidence            9999987543  334 66665553

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=1.3e-14  Score=123.09  Aligned_cols=218  Identities=12%  Similarity=0.059  Sum_probs=140.0

Q ss_pred             CCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .++++||||+  +.||.++++.|+++|++|++..|+...   ...+...........+|+.|+++++++++       ++
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999997  899999999999999999988876321   11111111111134689999888876653       58


Q ss_pred             cEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |++||+||....       .....+.++..+++|+.++..+++++........++|++||.+.  ...         .|.
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~--~~~---------~p~  158 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGA--EKV---------MPH  158 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccc--ccC---------CCc
Confidence            999999996421       13345678889999999999999887763223368899988543  211         122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHc-CCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|.........++.+   .++++.++.||.+..+................ ..|++      .+..++|+|+++
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~------r~~~peevA~~~  232 (272)
T PRK08159        159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR------RTVTIEEVGDSA  232 (272)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCccc------ccCCHHHHHHHH
Confidence            3456 6676666655544443   48999999999987642111111000011111 11221      257889999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCC
Q 020254          239 YEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +.++....  ..| ++.+.++.
T Consensus       233 ~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        233 LYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHhCccccCccceEEEECCCc
Confidence            99997543  345 66666664

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.64  E-value=2.5e-14  Score=120.84  Aligned_cols=216  Identities=14%  Similarity=0.042  Sum_probs=134.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-c----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-I----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|.||.++++.|+++|++|+++.|+...... .    ...........+|+.|.+++.++++       +
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999988886432211 1    1111111134579988887766553       5


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHH----HHhcCCCC-CCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVD----LINESPEG-VRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      +|++||+|+.....   ....+.++..+++|+.++..++.    .+.+  .+ ..++|++||...  +..         .
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~g~iv~~sS~~~--~~~---------~  152 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVE--HDIKGNIINMSSVHE--QIP---------W  152 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEccccc--cCC---------C
Confidence            89999999964322   23446677888999888765544    4444  33 357899998643  221         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-chhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....+..+   .++++++++||.+..+... ...............+.      ..+...+|+++
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~  226 (261)
T PRK08936        153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM------GYIGKPEEIAA  226 (261)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC------CCCcCHHHHHH
Confidence            223456 6665554444433322   4899999999999887421 11010000111112222      23677899999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      .+..++....  ..| .+.+.++
T Consensus       227 ~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        227 VAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             HHHHHcCcccCCccCcEEEECCC
Confidence            9999987543  345 5555554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.63  E-value=3.5e-14  Score=125.25  Aligned_cols=191  Identities=15%  Similarity=0.132  Sum_probs=123.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      .++|+|+||||+|+||+++++.|.++|++|++++|++.+....... ........+|+.|.+++.+.+.++|++||+||.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            3467999999999999999999999999999999986543221110 000113357888999999999999999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC---CCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  173 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~---~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~  173 (328)
                      ....+...+..+..+++|+.++.++++++.+.  ..+   .+.++..+|++.  ..          .+..+.| .+|...
T Consensus       256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~--~~----------~~~~~~Y~ASKaAl  323 (406)
T PRK07424        256 NVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE--VN----------PAFSPLYELSKRAL  323 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc--cc----------CCCchHHHHHHHHH
Confidence            54445556677889999999999999987642  111   122323333221  11          0112457 777666


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      ...........+..+..+.||.+..+    .                   .....+..+|+|+.++.+++++.
T Consensus       324 ~~l~~l~~~~~~~~I~~i~~gp~~t~----~-------------------~~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        324 GDLVTLRRLDAPCVVRKLILGPFKSN----L-------------------NPIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHhCCCCceEEEEeCCCcCC----C-------------------CcCCCCCHHHHHHHHHHHHHCCC
Confidence            65544433333444444444332111    0                   01124789999999999998754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=2.7e-14  Score=120.16  Aligned_cols=218  Identities=11%  Similarity=0.017  Sum_probs=137.9

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCcc---cccCCC--CCccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPG--KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~--~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ..++++||||+  +.||.++++.|+++|++|++++|+....   .++...  ........+|+.|+++++++++      
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            45789999997  8999999999999999999988753221   111111  1111244689999988776653      


Q ss_pred             -CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                       ++|++||+||....       .+...+.+...+++|+.+...+++++...-....++|++||...  .-.         
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~---------  154 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG--ERV---------  154 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC--ccC---------
Confidence             58999999986421       13344566778899999988887777653122357999998653  110         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      .+....| .+|.........++.+   .|+++..+.||.+-.+............. .....|+      ..+..++|++
T Consensus       155 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~~va  228 (257)
T PRK08594        155 VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL------RRTTTQEEVG  228 (257)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc------cccCCHHHHH
Confidence            1223457 7777776666555443   48999999999987652110000000001 0111111      2257889999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++++.++....  ..| ++.+.++
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHcCcccccccceEEEECCc
Confidence            99999987543  344 5666554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.63  E-value=1.4e-14  Score=122.06  Aligned_cols=218  Identities=15%  Similarity=0.085  Sum_probs=138.8

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCc------ccccCCCCCccccCceeecCChhhHhhcC-----
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK------AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      +.++++||||+  +.||.+++++|++.|++|++..|+...      ..++...........+|+.|+++++++++     
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            34789999986  799999999999999999888765432      11111111111244689999988876653     


Q ss_pred             --CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 --GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                        ++|++||+||....       .....+.++..+++|+.++..+.+++...-....++|++||...  ...        
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~--------  154 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG--VRA--------  154 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc--ccC--------
Confidence              68999999996421       22345677889999999999988877653112368999998643  211        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcCCCCCCCCcccccccHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                       .|....| .+|.........++.+   .|+.+.++.||.+-.+............. .....|+      ..+...+|+
T Consensus       155 -~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dv  227 (258)
T PRK07370        155 -IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL------RRTVTQTEV  227 (258)
T ss_pred             -CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc------CcCCCHHHH
Confidence             1223457 7777666666555443   48999999999997763211100000011 0111121      235678999


Q ss_pred             HHHHHHHhhCCC--CCc-eEEecCC
Q 020254          235 VNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       235 a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +.++..++....  ..| ++.+.++
T Consensus       228 a~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        228 GNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             HHHHHHHhChhhccccCcEEEECCc
Confidence            999999987543  334 6666554

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=2.9e-14  Score=120.27  Aligned_cols=217  Identities=12%  Similarity=0.014  Sum_probs=139.1

Q ss_pred             CCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+.++||||++  .||.++++.|+++|++|++.+|+...   ...+...........+|+.|+++++++++       ++
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            46899999997  89999999999999999998887321   11111110111134689999988876663       58


Q ss_pred             cEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |++||+|+....       .+...+.+...+++|+.++..+++++........++|++||.+.  ...         .+.
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~--~~~---------~~~  156 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGA--EKV---------IPN  156 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcc--ccC---------CCc
Confidence            999999986421       23456778889999999999988877553122358999998653  211         122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|.........++.+   .|+.+.++.||.+-.+........-.... .....|+      ..+...+|+|+++
T Consensus       157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~~  230 (260)
T PRK06603        157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL------KRNTTQEDVGGAA  230 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc------CCCCCHHHHHHHH
Confidence            3456 6776666655544443   48999999999987652110000000111 1111222      1257789999999


Q ss_pred             HHHhhCCC--CCc-eEEecCC
Q 020254          239 YEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +.++....  ..| .+.+.++
T Consensus       231 ~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        231 VYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHHhCcccccCcceEEEeCCc
Confidence            99987533  344 6666555

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.62  E-value=4.2e-14  Score=117.86  Aligned_cols=212  Identities=17%  Similarity=0.136  Sum_probs=134.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cccC----CCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      |+||||+|+||.++++.|+++|++|++++|+.... ....    ..........+|+.|.+++.++++       +.|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999998764321 1111    111111244689988887766553       57999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHh-cC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLIN-ES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~-~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||++|.....   ....+++...++.|+.++..+++++. ..  ..+..++|++||... .++.+          ....|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~-~~~~~----------~~~~Y  149 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSG-VMGNR----------GQVNY  149 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhh-ccCCC----------CCcch
Confidence            9999864322   23456778899999999999988753 10  124468999999653 14422          22346


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|...+.....+..+   .|++++.++||.+.++..........  ......|+.      .+...+|++++++.++.
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~------~~~~~~~va~~~~~l~~  221 (239)
T TIGR01831       150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLD--EALKTVPMN------RMGQPAEVASLAGFLMS  221 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHH--HHHhcCCCC------CCCCHHHHHHHHHHHcC
Confidence             5565544444333222   48999999999998774321111111  111112221      24678999999999988


Q ss_pred             CCC--CCc-eEEecCC
Q 020254          244 NPS--YRG-VINGTAP  256 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~  256 (328)
                      .+.  ..| +..+.++
T Consensus       222 ~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       222 DGASYVTRQVISVNGG  237 (239)
T ss_pred             chhcCccCCEEEecCC
Confidence            643  334 4444443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.5e-15  Score=120.89  Aligned_cols=169  Identities=12%  Similarity=0.068  Sum_probs=116.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-----CCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a   97 (328)
                      |++|+||||+|+||++++++|+++|++|++++|++.......... ......+|+.|.++++++++     ++|+|||++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALP-GVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhcc-ccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcC
Confidence            468999999999999999999999999999999886543332211 11244578888887776664     589999999


Q ss_pred             CCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      |....     .....+.....+.+|+.++..+++++... ..+...++++||.    +|.....    .....+.| .+|
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~----~g~~~~~----~~~~~~~Y~~sK  151 (225)
T PRK08177         80 GISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ----LGSVELP----DGGEMPLYKASK  151 (225)
T ss_pred             cccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC----ccccccC----CCCCccchHHHH
Confidence            87422     12344666778889999999998888653 1233467777764    2221110    01122357 777


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCC
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKD  200 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~  200 (328)
                      ...+.+...+..+   .++.+..++||.+-.+.
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            7777766655433   47999999999987663

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.62  E-value=3.2e-14  Score=119.22  Aligned_cols=200  Identities=16%  Similarity=0.140  Sum_probs=128.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----C-CccccCceeec--CChhhHhh-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K-KTRFFPGVMIA--EEPQWRDC-------   86 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~d~~--~~~~~~~~-------   86 (328)
                      .+.++|+||||+|+||.+++++|++.|++|++++|+..+.......    . ....+..+|+.  +.+++.++       
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            3557999999999999999999999999999999987543222110    0 00012234554  44443333       


Q ss_pred             cCCCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           87 IQGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        87 ~~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      +.++|+|||+|+....    .....+.++..+++|+.++..+++++...  +.+..++|++||.... ++.         
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~---------  159 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR-QGR---------  159 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc-CCC---------
Confidence            3468999999986422    13345667889999999988888776431  1466789999987541 221         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                       +....| .+|...+.....+...   .++++++++|+.+-++...   ...      ..      .....+...+|++.
T Consensus       160 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~---~~~------~~------~~~~~~~~~~~~~~  223 (247)
T PRK08945        160 -ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA---SAF------PG------EDPQKLKTPEDIMP  223 (247)
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh---hhc------Cc------ccccCCCCHHHHHH
Confidence             122356 6676666555443332   3788999999988665210   000      00      01123678899999


Q ss_pred             HHHHHhhCCC
Q 020254          237 LIYEALSNPS  246 (328)
Q Consensus       237 ~~~~~~~~~~  246 (328)
                      .+..++....
T Consensus       224 ~~~~~~~~~~  233 (247)
T PRK08945        224 LYLYLMGDDS  233 (247)
T ss_pred             HHHHHhCccc
Confidence            9999886543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.4e-14  Score=119.21  Aligned_cols=216  Identities=16%  Similarity=0.075  Sum_probs=138.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----C-CCccccCceeecCChhhHhhcC---CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G-KKTRFFPGVMIAEEPQWRDCIQ---GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~d~~~~~~~~~~~~---~~d~v   93 (328)
                      +.++++||||+|.||.++++.|++.|++|++++|++.+......    . ........+|+.|.+++.++++   ++|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            34799999999999999999999999999999998765433211    0 1111244578888888876664   68999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||++|....   .....+.+...+++|+.+...+++++...  +.+..++|++||...  ...         .+....| 
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~--~~~---------~~~~~~y~  154 (259)
T PRK06125         86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAG--ENP---------DADYICGS  154 (259)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccc--cCC---------CCCchHhH
Confidence            999986432   23455677888999999988888876432  133457888887643  110         1112334 


Q ss_pred             HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHH-----------HH-HHHcCCCCCCCCcccccccHH
Q 020254          168 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIP-----------LF-MMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~i~v~  232 (328)
                      .+|.........+..   ..|++++.+.||.+..+...   .+..           .. ......|.      ..+..++
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  225 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML---TLLKGRARAELGDESRWQELLAGLPL------GRPATPE  225 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH---HHHHhhhhcccCCHHHHHHHhccCCc------CCCcCHH
Confidence            555555444443322   34899999999998776310   0000           00 00011111      2357889


Q ss_pred             HHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          233 DIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       233 D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      |+|++++.++....  ..| ++.+.++.
T Consensus       226 ~va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        226 EVADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHHHcCchhccccCceEEecCCe
Confidence            99999999986532  344 66776653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.61  E-value=1.3e-13  Score=114.70  Aligned_cols=196  Identities=10%  Similarity=0.074  Sum_probs=126.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh---cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~d~vi~~a~   98 (328)
                      |+|+||||+|+||++++++|+++|  +.|....|+......    .....+..+|+.+.++++++   +.++|+|||+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG   76 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQ----HDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG   76 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccc----cCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence            589999999999999999999985  566666665433211    01112456899988876654   457899999999


Q ss_pred             CCCCC---------CCChhHHHHHHHhhhhhHHHHHHHHhcC-C-CCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           99 TPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        99 ~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      .....         ....+.....+++|+.++..++..+... . .+..+++++||.... ...       ...+....|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~-~~~-------~~~~~~~~Y  148 (235)
T PRK09009         77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS-ISD-------NRLGGWYSY  148 (235)
T ss_pred             cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc-ccc-------CCCCCcchh
Confidence            75321         1233456678899999988887777653 1 234578888874211 110       111223356


Q ss_pred             -HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|...+.....++.+     .++.+..+.||.+..+.....   .      ...+      ...++..+|+|++++.+
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---~------~~~~------~~~~~~~~~~a~~~~~l  213 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---Q------QNVP------KGKLFTPEYVAQCLLGI  213 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---h------hccc------cCCCCCHHHHHHHHHHH
Confidence             6676666655544432     378899999999877642110   0      1111      12257899999999999


Q ss_pred             hhCCC
Q 020254          242 LSNPS  246 (328)
Q Consensus       242 ~~~~~  246 (328)
                      +....
T Consensus       214 ~~~~~  218 (235)
T PRK09009        214 IANAT  218 (235)
T ss_pred             HHcCC
Confidence            98754

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.61  E-value=7.2e-14  Score=119.47  Aligned_cols=215  Identities=18%  Similarity=0.083  Sum_probs=136.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC---------CcccccC----CCCCccccCceeecCChhhHhhc-
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-   87 (328)
                      +.++++||||++.||.++++.|++.|++|++++|+.         .......    ..........+|+.|.+++.+++ 
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            457899999999999999999999999999988765         2111111    11111123457999988776655 


Q ss_pred             ------CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-C-C------CCCcEEEEecccceeec
Q 020254           88 ------QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E------GVRPSVLVSATALGYYG  150 (328)
Q Consensus        88 ------~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~------~~~~~v~~Ss~~v~~yg  150 (328)
                            .++|++||+||....   .....+.++..+++|+.++..+++++... . .      ...++|++||.... ++
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-~~  163 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL-QG  163 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC-cC
Confidence                  368999999997432   23456778899999999988887776431 0 1      12479999986541 22


Q ss_pred             CCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCccc
Q 020254          151 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWF  226 (328)
Q Consensus       151 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (328)
                      .          +....| .+|...+.....++.+   .|+++..|.|+ +..+-   ........  ....+    ....
T Consensus       164 ~----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~---~~~~~~~~--~~~~~----~~~~  223 (286)
T PRK07791        164 S----------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM---TETVFAEM--MAKPE----EGEF  223 (286)
T ss_pred             C----------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc---chhhHHHH--HhcCc----cccc
Confidence            1          123456 6776666655554443   48999999998 42221   11111111  11111    1112


Q ss_pred             ccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          227 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .+..++|++.+++.++....  ..| ++.+.++.
T Consensus       224 ~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        224 DAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            35679999999999987532  345 66665554

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.60  E-value=1.8e-13  Score=115.20  Aligned_cols=214  Identities=11%  Similarity=0.053  Sum_probs=134.3

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCc--------cc---c----cCCCCCccccCceeecCChhhH
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK--------AE---L----IFPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~---~----~~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      +.++|+||||+|  .||.+++++|+++|++|++++|....        ..   .    ............+|+.|.+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            457999999995  89999999999999999887643210        00   0    0111111113457888888887


Q ss_pred             hhcC-------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCC
Q 020254           85 DCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTS  152 (328)
Q Consensus        85 ~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~  152 (328)
                      ++++       .+|++||+||....   .....+..+..+++|+.++..+..++...  +.+..++|++||...  +.. 
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~-  161 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF--QGP-  161 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc--CCC-
Confidence            6663       47999999996432   23445677888999999988886544331  134568999999764  221 


Q ss_pred             CcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCccccc
Q 020254          153 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  228 (328)
Q Consensus       153 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (328)
                              .+....| .+|...+.....+..+   .+++++.++||.+-.+...  ......  .....++      ..+
T Consensus       162 --------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~~~~~--~~~~~~~------~~~  223 (256)
T PRK12859        162 --------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EEIKQG--LLPMFPF------GRI  223 (256)
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HHHHHH--HHhcCCC------CCC
Confidence                    1223467 6776666665444433   4899999999998765311  111111  1111111      124


Q ss_pred             ccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          229 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ...+|+++++..++....  ..| ++.+.++
T Consensus       224 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        224 GEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            678999999999887543  344 5555443

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.2e-14  Score=125.83  Aligned_cols=178  Identities=15%  Similarity=0.061  Sum_probs=120.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      .+.++++||||+|+||.+++++|+++|++|++++|+..+.......      .....+..+|+.|.++++++++      
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3467999999999999999999999999999999987643322110      0111245689999888876653      


Q ss_pred             -CCcEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCC--C
Q 020254           89 -GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESS--P  162 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~--~  162 (328)
                       ++|++||+||.....  ....+..+..+.+|+.++..+...+... ..+..++|++||.... ++........+..  +
T Consensus        92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~-~~~~~~~~~~~~~~~~  170 (313)
T PRK05854         92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAAR-RGAINWDDLNWERSYA  170 (313)
T ss_pred             CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhc-CCCcCcccccccccCc
Confidence             589999999975321  2344667888999999988777766532 1234689999997641 3321111122222  2


Q ss_pred             CCCch-HHHHHHHHHHHHhcc-----cCCCeEEEEEeceEEcC
Q 020254          163 SGNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGK  199 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~v~g~  199 (328)
                      +...| .+|.........++.     ..++.+.++.||.+..+
T Consensus       171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            33457 777776666554432     24799999999998765

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.60  E-value=8e-14  Score=120.35  Aligned_cols=215  Identities=17%  Similarity=0.044  Sum_probs=134.4

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCChhhHhhcC------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ..+.++++||||+|+||.+++++|+++|++|++.+++... .....    ..........+|+.|.+.+.++++      
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            3456799999999999999999999999999999876432 11111    111111234578888877776553      


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC-C-----C---CCCcEEEEecccceeecCCCccc
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-P-----E---GVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-----~---~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                      ++|+|||+||.....   ....+.+...+++|+.++..+++++... .     .   ...++|++||...  +...    
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~----  162 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG--LVGP----  162 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc--ccCC----
Confidence            689999999975332   2445677889999999999998876531 0     0   1247899988654  2211    


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHH
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  232 (328)
                           +....| .+|...+.....+..+   +|+.+.++.|+.  ...  .......      ..+. .......++.++
T Consensus       163 -----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~--~~~~~~~------~~~~-~~~~~~~~~~pe  226 (306)
T PRK07792        163 -----VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTA--MTADVFG------DAPD-VEAGGIDPLSPE  226 (306)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCc--hhhhhcc------ccch-hhhhccCCCCHH
Confidence                 123457 7777766665544432   589999999972  111  0000000      0000 000112346899


Q ss_pred             HHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          233 DIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       233 D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      |++.++..++....  ..| +|.+.++
T Consensus       227 ~va~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        227 HVVPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             HHHHHHHHHcCccccCCCCCEEEEcCC
Confidence            99999998886532  233 6666554

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.59  E-value=6.7e-14  Score=119.03  Aligned_cols=223  Identities=17%  Similarity=0.101  Sum_probs=137.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~------~~d   91 (328)
                      |++.++|||| |+||+++++.|. +|++|++++|+..+......    .........+|+.|.+++.++++      ++|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            3467899997 799999999996 79999999998654332211    11111244689999888876663      589


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc-------cccc------
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-------EVFD------  158 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~-------~~~~------  158 (328)
                      ++||+||...    ....++..+++|+.++.++++++.+.-....++|++||.... ......       ...+      
T Consensus        79 ~li~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~-~~~~~~~~~~~~~~~~~~~~~~~  153 (275)
T PRK06940         79 GLVHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGH-RLPALTAEQERALATTPTEELLS  153 (275)
T ss_pred             EEEECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccc-cCcccchhhhccccccccccccc
Confidence            9999999641    235678899999999999999887631122456788776541 221000       0000      


Q ss_pred             -----CCC--CCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcc-hhhhH-HHH-HHHcCCCCCCCCc
Q 020254          159 -----ESS--PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKMI-PLF-MMFAGGPLGSGQQ  224 (328)
Q Consensus       159 -----e~~--~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~~~~-~~~-~~~~~~~~~~~~~  224 (328)
                           +..  +....| .+|.........++.   ..|+.+..+.||.+..+.... ..... ... ......|+     
T Consensus       154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-----  228 (275)
T PRK06940        154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA-----  228 (275)
T ss_pred             cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc-----
Confidence                 000  123457 777766555544333   248999999999998763211 10000 001 11111122     


Q ss_pred             ccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          225 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       225 ~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                       ..+...+|+|++++.++....  ..| ++.+.++.
T Consensus       229 -~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        229 -GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             -ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence             226789999999999886433  344 67776653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=5.7e-14  Score=116.20  Aligned_cols=170  Identities=16%  Similarity=0.093  Sum_probs=120.0

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CCC-CC-ccccCceeecCChhhHhhc-----
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG-KK-TRFFPGVMIAEEPQWRDCI-----   87 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~-~~-~~~~~~~d~~~~~~~~~~~-----   87 (328)
                      .....|.|+|||||+.||.+++.+|.++|.+++.+.|...+....    ... .. .....++|+.|.+++++++     
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            344568999999999999999999999999888888877665444    111 11 1224468999999888554     


Q ss_pred             --CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           88 --QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        88 --~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                        .++|++||+||....   ..........++++|+.|+..+..++...  +.+..++|.+||...  +-.         
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG--~~~---------  156 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG--KMP---------  156 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc--ccC---------
Confidence              489999999998643   23345666778999999987777766553  134579999999874  221         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhcccCCCeEE----EEEeceEEcC
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVNKDVRLA----LIRIGIVLGK  199 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~----ilRp~~v~g~  199 (328)
                      .|..+.| .+|.+.....+.++.+..-..+    ++-||.|-..
T Consensus       157 ~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  157 LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence            2334467 8888888887777766532222    4677776654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=1.4e-13  Score=115.82  Aligned_cols=218  Identities=15%  Similarity=0.065  Sum_probs=135.3

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCC--cccccCCC-CCccccCceeecCChhhHhhc-------CC
Q 020254           22 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS--KAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        22 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      ..++++||||  ++.||.++++.|+++|++|++++|+..  ........ ........+|+.|++++++++       .+
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999  899999999999999999999987642  11211111 011124568999988877665       36


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+||....       .+...+.....+++|+.++..+..++...-....++|++|+.+.  .+          .+
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~--~~----------~~  153 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT--VA----------WP  153 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc--cc----------CC
Confidence            8999999997421       12233556677899999998888877653112357888875432  11          12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|.........++.+   .|+++.++.||.+-.+-.......-... ......|++     +.+..++|+|++
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~p~evA~~  228 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLG-----WDVKDPTPVARA  228 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccc-----cccCCHHHHHHH
Confidence            22345 6666665555444433   4899999999999775321110000000 111111211     135789999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCC
Q 020254          238 IYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++.++....  ..| ++.+.++
T Consensus       229 v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        229 VVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHhCcccccccceEEEEcCc
Confidence            999987643  344 5655544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.58  E-value=1.5e-13  Score=116.45  Aligned_cols=217  Identities=14%  Similarity=0.073  Sum_probs=132.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CcccccC----C-CCCccccCceeecCChhh----Hhhc------
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----P-GKKTRFFPGVMIAEEPQW----RDCI------   87 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~-~~~~~~~~~~d~~~~~~~----~~~~------   87 (328)
                      +.++||||+|+||.++++.|+++|++|+++.|+. .......    . .........+|+.|.+.+    ++.+      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            4799999999999999999999999999987653 2221111    0 011111345799988644    2222      


Q ss_pred             -CCCcEEEECCCCCCCCCC---Ch-----------hHHHHHHHhhhhhHHHHHHHHhcCC--C------CCCcEEEEecc
Q 020254           88 -QGSTAVVNLAGTPIGTRW---SS-----------EIKKEIKESRIRVTSKVVDLINESP--E------GVRPSVLVSAT  144 (328)
Q Consensus        88 -~~~d~vi~~a~~~~~~~~---~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~------~~~~~v~~Ss~  144 (328)
                       .++|+|||+||.......   ..           ......+++|+.++..+.+++....  .      ....++++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             368999999996422111   11           2356788999999999888765421  1      12346666665


Q ss_pred             cceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCC
Q 020254          145 ALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG  220 (328)
Q Consensus       145 ~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~  220 (328)
                      ..  ..         ..+....| .+|...+.+...++.+   .|+++++++||.+..+.... ......+  ....++.
T Consensus       162 ~~--~~---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-~~~~~~~--~~~~~~~  227 (267)
T TIGR02685       162 MT--DQ---------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-FEVQEDY--RRKVPLG  227 (267)
T ss_pred             hc--cC---------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-hhHHHHH--HHhCCCC
Confidence            32  11         12233457 7787777666655444   48999999999987663211 1111111  1111211


Q ss_pred             CCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCCcc
Q 020254          221 SGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV  259 (328)
Q Consensus       221 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~~  259 (328)
                           ..+...+|++++++.++....  ..| .+.+.++..+
T Consensus       228 -----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       228 -----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             -----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence                 124688999999999987643  344 6666665433

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.58  E-value=2.2e-14  Score=121.25  Aligned_cols=218  Identities=17%  Similarity=0.080  Sum_probs=138.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.++++||||+|+||.+++++|++.|++|++++|+......+... ........+|+.|.+++.++++       ++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            357999999999999999999999999999999987654333221 1111134578888877665553       68999


Q ss_pred             EECCCCCCC-C---CCCh----hHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           94 VNLAGTPIG-T---RWSS----EIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        94 i~~a~~~~~-~---~~~~----~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ||+||.... .   ....    +.++..+++|+.++..+++++.+. .....++|++||...  +...         +..
T Consensus        84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~  152 (262)
T TIGR03325        84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAG--FYPN---------GGG  152 (262)
T ss_pred             EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccce--ecCC---------CCC
Confidence            999986321 1   1111    246788999999999999988763 112357888888654  2211         122


Q ss_pred             Cch-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcch-----hhh---HHHHHHHc-CCCCCCCCcccccccHH
Q 020254          165 NDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL-----AKM---IPLFMMFA-GGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~-----~~~---~~~~~~~~-~~~~~~~~~~~~~i~v~  232 (328)
                      ..| .+|...+.....++.+.  ++++..+.||.+..+-....     ...   .+...... ..|+      ..+...+
T Consensus       153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~  226 (262)
T TIGR03325       153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI------GRMPDAE  226 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC------CCCCChH
Confidence            357 77777777666555543  48899999999986632110     000   00001111 1111      2256789


Q ss_pred             HHHHHHHHHhhCCC---CCc-eEEecCC
Q 020254          233 DIVNLIYEALSNPS---YRG-VINGTAP  256 (328)
Q Consensus       233 D~a~~~~~~~~~~~---~~g-~~~i~~~  256 (328)
                      |++++++.++..+.   ..| ++.+.++
T Consensus       227 eva~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       227 EYTGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             HhhhheeeeecCCCcccccceEEEecCC
Confidence            99999998886532   244 6666555

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.1e-14  Score=135.09  Aligned_cols=197  Identities=12%  Similarity=0.088  Sum_probs=136.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..++++||||+|+||.++++.|+++|++|++++|++....+...    .........+|+.|.+++.++++       ++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999999999998765433211    11111244689999988877664       68


Q ss_pred             cEEEECCCCCCCCCC-----ChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |++||+||.......     ..+.....+++|+.++..++.++...  +.+..++|++||.+.  |+..         +.
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  518 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGV--QTNA---------PR  518 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhh--cCCC---------CC
Confidence            999999996422111     12457788999999988887765432  145678999999876  5532         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....+..+   .++.+++++||.+..+.......            .    .....+..+++|+.++
T Consensus       519 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~------------~----~~~~~~~~~~~a~~i~  582 (657)
T PRK07201        519 FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR------------Y----NNVPTISPEEAADMVV  582 (657)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc------------c----cCCCCCCHHHHHHHHH
Confidence            3457 6777666665554433   48999999999998764211100            0    0123578999999999


Q ss_pred             HHhhCC
Q 020254          240 EALSNP  245 (328)
Q Consensus       240 ~~~~~~  245 (328)
                      ..+...
T Consensus       583 ~~~~~~  588 (657)
T PRK07201        583 RAIVEK  588 (657)
T ss_pred             HHHHhC
Confidence            987653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.56  E-value=1.1e-13  Score=119.94  Aligned_cols=195  Identities=14%  Similarity=0.071  Sum_probs=129.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC------CccccCceeecC--Chhh---HhhcC--C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK------KTRFFPGVMIAE--EPQW---RDCIQ--G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~d~~~--~~~~---~~~~~--~   89 (328)
                      .+.++||||||.||.+++++|+++|++|++++|++.+........      .......+|+.+  .+.+   .+.+.  +
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999876543322110      011123467764  2222   33334  3


Q ss_pred             CcEEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+||....     .+...+..+..+++|+.++..+.+++...  +.+..++|++||...  +...       ..|
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~--~~~~-------~~p  203 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAA--IVIP-------SDP  203 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhh--ccCC-------CCc
Confidence            5699999997421     13345667788999999998888876542  145678999999765  3210       012


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ....| .+|...+.....++.+   .|+++++++||.+-.+-...           ..       ........+++|+.+
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-----------~~-------~~~~~~~p~~~A~~~  265 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-----------RR-------SSFLVPSSDGYARAA  265 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-----------cC-------CCCCCCCHHHHHHHH
Confidence            23567 7777766665555443   48999999999997663210           00       011145789999999


Q ss_pred             HHHhhC
Q 020254          239 YEALSN  244 (328)
Q Consensus       239 ~~~~~~  244 (328)
                      +..+..
T Consensus       266 ~~~~~~  271 (320)
T PLN02780        266 LRWVGY  271 (320)
T ss_pred             HHHhCC
Confidence            999864

>PRK06484 short chain dehydrogenase; Validated

Probab=99.54  E-value=2.3e-13  Score=126.35  Aligned_cols=206  Identities=20%  Similarity=0.141  Sum_probs=135.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..++++||||++.||.++++.|+++|++|++++|+........... .......+|+.|++++.++++       ++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3478999999999999999999999999999999876543332211 111235689999988776653       58999


Q ss_pred             EECCCCCC-----CCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-CcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           94 VNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        94 i~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      ||+||...     ......+.++..+++|+.++..+++++...  +.+. .++|++||...  ....         +...
T Consensus        84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~--~~~~---------~~~~  152 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAG--LVAL---------PKRT  152 (520)
T ss_pred             EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCccc--CCCC---------CCCc
Confidence            99998631     123456778899999999999988887753  1232 38999998764  2211         1224


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh--hHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...+.....+..+   .++++++++||.+..+.......  ...........+.      ..+...+|+++++.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~v~  226 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL------GRLGRPEEIAEAVF  226 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC------CCCcCHHHHHHHHH
Confidence            56 6676666655544443   37999999999886653211100  0000000011111      12467899999999


Q ss_pred             HHhhC
Q 020254          240 EALSN  244 (328)
Q Consensus       240 ~~~~~  244 (328)
                      .++..
T Consensus       227 ~l~~~  231 (520)
T PRK06484        227 FLASD  231 (520)
T ss_pred             HHhCc
Confidence            88875

>PRK05599 hypothetical protein; Provisional

Probab=99.54  E-value=2.9e-13  Score=113.22  Aligned_cols=202  Identities=14%  Similarity=0.115  Sum_probs=128.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCC-ccccCceeecCChhhHhhc-------CCCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKK-TRFFPGVMIAEEPQWRDCI-------QGST   91 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~d~~~~~~~~~~~-------~~~d   91 (328)
                      |+++||||++.||.+++++|. +|++|++++|+..+......    ... ......+|+.|.+++++++       .++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            679999999999999999998 59999999998765433211    111 1124468999988777654       3689


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      ++||+||.....   ...........++|+.+...++.++...  ..+ ..++|++||...  +-.         .+...
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~--~~~---------~~~~~  148 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG--WRA---------RRANY  148 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc--ccC---------CcCCc
Confidence            999999974321   2233344566677888776555444221  022 468999999754  211         12234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|.........++.+   .++.+..+.||.+..+-....            .+.     .. ....+|+|++++.+
T Consensus       149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~------------~~~-----~~-~~~pe~~a~~~~~~  210 (246)
T PRK05599        149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM------------KPA-----PM-SVYPRDVAAAVVSA  210 (246)
T ss_pred             chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC------------CCC-----CC-CCCHHHHHHHHHHH
Confidence            56 6676665555444332   489999999998876521000            000     01 25789999999999


Q ss_pred             hhCCCCCceEEecC
Q 020254          242 LSNPSYRGVINGTA  255 (328)
Q Consensus       242 ~~~~~~~g~~~i~~  255 (328)
                      +......+.+.+..
T Consensus       211 ~~~~~~~~~~~~~~  224 (246)
T PRK05599        211 ITSSKRSTTLWIPG  224 (246)
T ss_pred             HhcCCCCceEEeCc
Confidence            99864334555543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.53  E-value=4.1e-14  Score=105.96  Aligned_cols=156  Identities=20%  Similarity=0.223  Sum_probs=110.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..+|..+|+||||-.|+.+++++++.+  -+|+++.|+....+.......   ...+|+..-+++....+++|+.|.+.|
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~---q~~vDf~Kl~~~a~~~qg~dV~FcaLg   92 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVA---QVEVDFSKLSQLATNEQGPDVLFCALG   92 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceee---eEEechHHHHHHHhhhcCCceEEEeec
Confidence            356789999999999999999999987  489999998644333332211   223455455555566679999999988


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG  177 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~  177 (328)
                      .+.....    .+-.++++-+....+++++++  +++++|+++||.+.     +         + .+.+ |.|.+.|.+.
T Consensus        93 TTRgkaG----adgfykvDhDyvl~~A~~AKe--~Gck~fvLvSS~GA-----d---------~-sSrFlY~k~KGEvE~  151 (238)
T KOG4039|consen   93 TTRGKAG----ADGFYKVDHDYVLQLAQAAKE--KGCKTFVLVSSAGA-----D---------P-SSRFLYMKMKGEVER  151 (238)
T ss_pred             ccccccc----cCceEeechHHHHHHHHHHHh--CCCeEEEEEeccCC-----C---------c-ccceeeeeccchhhh
Confidence            6544322    123344555556688899999  89999999999876     1         1 1223 6677777777


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCC
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDG  201 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~  201 (328)
                      ......+ -.++|+|||.+.|...
T Consensus       152 ~v~eL~F-~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  152 DVIELDF-KHIIILRPGPLLGERT  174 (238)
T ss_pred             hhhhccc-cEEEEecCcceecccc
Confidence            7666542 2689999999999764

>PRK05855 short chain dehydrogenase; Validated

Probab=99.53  E-value=7.2e-14  Score=131.68  Aligned_cols=209  Identities=17%  Similarity=0.068  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..++++||||+|+||++++++|+++|++|++++|+..+......    .........+|+.|++++.++++       ++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            45789999999999999999999999999999998755433211    11111244689999988876664       58


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||....   .....+.....+++|+.++.++++++...  ..+ ..++|++||.+.  |...         +..
T Consensus       394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~  462 (582)
T PRK05855        394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAA--YAPS---------RSL  462 (582)
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh--ccCC---------CCC
Confidence            999999997533   23345677888999999998888876432  122 358999999876  5532         223


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh--hh----HHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA--KM----IPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      ..| .+|...+.....+..   ..|+.+++++||.|-.+-.....  ..    .............     ......+|+
T Consensus       463 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~v  537 (582)
T PRK05855        463 PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQ-----RRGYGPEKV  537 (582)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcc-----ccCCCHHHH
Confidence            457 777766665544433   24899999999998765211100  00    0000000000000     113567999


Q ss_pred             HHHHHHHhhCCC
Q 020254          235 VNLIYEALSNPS  246 (328)
Q Consensus       235 a~~~~~~~~~~~  246 (328)
                      |++++.++..+.
T Consensus       538 a~~~~~~~~~~~  549 (582)
T PRK05855        538 AKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHcCC
Confidence            999999998754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.53  E-value=1.1e-13  Score=119.77  Aligned_cols=224  Identities=15%  Similarity=0.124  Sum_probs=134.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhc-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      |.++++||||++.||.++++.|+++| ++|++++|+..+..+....    ........+|+.|.+++++++       .+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            35689999999999999999999999 9999999987644322111    011113457888888776554       35


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC--CCCcEEEEecccceeecCCCc----cc-
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE--GVRPSVLVSATALGYYGTSET----EV-  156 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~--~~~~~v~~Ss~~v~~yg~~~~----~~-  156 (328)
                      +|++||+||....    .....+..+..+++|+.++..++.++...  +.  +..++|++||...  +.....    .+ 
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~--~~~~~~~~~~~~~  159 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG--NTNTLAGNVPPKA  159 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc--ccccCCCcCCCcc
Confidence            8999999996422    12345677888999999987776665442  12  2468999999865  431100    00 


Q ss_pred             -----------------ccCCC--CCCCch-HHHHHHHHHHHHhcc----cCCCeEEEEEeceEEcCCC-cc-hhhhHHH
Q 020254          157 -----------------FDESS--PSGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDG-GA-LAKMIPL  210 (328)
Q Consensus       157 -----------------~~e~~--~~~~~y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~-~~-~~~~~~~  210 (328)
                                       ..+..  .+...| .+|.........+..    ..++.++.++||.|..... .. .......
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~  239 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTL  239 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHH
Confidence                             00111  123457 777665444433322    2479999999999963321 11 1000001


Q ss_pred             HHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCceEEe
Q 020254          211 FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVING  253 (328)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~~i  253 (328)
                      +........      ..+..+++.++.++.++..+.  .+|.|.-
T Consensus       240 ~~~~~~~~~------~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       240 FPPFQKYIT------KGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHHHHh------ccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            110000000      114678999999998887643  3454443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=1.2e-12  Score=119.23  Aligned_cols=216  Identities=15%  Similarity=0.033  Sum_probs=135.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ..++++||||+|.||..++++|.++|++|++++|+....  ........ .....+|+.|.++++++++       ++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG-GTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            357899999999999999999999999999998854321  11111000 0134579999887776653       5899


Q ss_pred             EEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+||.....   ....+.++..+++|+.++.++.+++...  .....++|++||.... ++.          +....|
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~-~g~----------~~~~~Y  356 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI-AGN----------RGQTNY  356 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc-CCC----------CCChHH
Confidence            99999975332   2345677889999999999999998762  1234689999987641 332          122456


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|...+.....+..   ..++.+.++.||.+-.+-............. .-.++      ......+|+++++..++.
T Consensus       357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~-~~~~l------~~~~~p~dva~~~~~l~s  429 (450)
T PRK08261        357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGR-RMNSL------QQGGLPVDVAETIAWLAS  429 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHh-hcCCc------CCCCCHHHHHHHHHHHhC
Confidence             666544444333322   2489999999998754321111000010000 00111      112456799999999886


Q ss_pred             CCC--CCc-eEEecCC
Q 020254          244 NPS--YRG-VINGTAP  256 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~  256 (328)
                      ...  ..| ++.+.++
T Consensus       430 ~~~~~itG~~i~v~g~  445 (450)
T PRK08261        430 PASGGVTGNVVRVCGQ  445 (450)
T ss_pred             hhhcCCCCCEEEECCC
Confidence            433  234 6666554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.49  E-value=4.8e-13  Score=106.01  Aligned_cols=160  Identities=16%  Similarity=0.130  Sum_probs=110.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccC-------CCCCccccCceeecCChhhHhhcC-------
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIF-------PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ++++|+||+|+||.+++++|+++|+ .|++++|++.......       ..........+|+.+.+.+++++.       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999985 7888888765432211       111111134578888777766653       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      .+|.|||+++....   .....+..+..++.|+.++..+++++.+  .+.++++++||... .++..          ...
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~ss~~~-~~~~~----------~~~  147 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFSSVAG-VLGNP----------GQA  147 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEccHHH-hcCCC----------Cch
Confidence            46999999986422   2334566778899999999999999977  56778999988654 14421          123


Q ss_pred             ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEE
Q 020254          166 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVL  197 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~  197 (328)
                      .| ..|...+....... ..+++++.+.||.+-
T Consensus       148 ~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      148 NYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             hhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence            45 55666666554433 358889999888764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.48  E-value=7.5e-13  Score=113.98  Aligned_cols=212  Identities=15%  Similarity=0.008  Sum_probs=129.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc----------ccc----CCCCCccccCceeecCChhhHhh
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA----------ELI----FPGKKTRFFPGVMIAEEPQWRDC   86 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~----~~~~~~~~~~~~d~~~~~~~~~~   86 (328)
                      ...++++||||++.||.++++.|++.|++|++++|+....          ...    ...........+|+.|+++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            3457999999999999999999999999999999974321          111    01111112346899998888766


Q ss_pred             cC-------CCcEEEECC-CCCC-----C--CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceee
Q 020254           87 IQ-------GSTAVVNLA-GTPI-----G--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYY  149 (328)
Q Consensus        87 ~~-------~~d~vi~~a-~~~~-----~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~y  149 (328)
                      ++       ++|++||+| +...     .  .+...+.+...+++|+.++..++.++...  +.+..++|++||.... +
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~-~  164 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE-Y  164 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc-c
Confidence            53       589999999 6320     1  12334556778889999888877766653  1334689999985431 2


Q ss_pred             cCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHH-HH-HHHcCCCCCCCC
Q 020254          150 GTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIP-LF-MMFAGGPLGSGQ  223 (328)
Q Consensus       150 g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~-~~-~~~~~~~~~~~~  223 (328)
                      +...       .+....| .+|.........++.+   .|+++..|.||.+-.+-......... .+ ......|+    
T Consensus       165 ~~~~-------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~----  233 (305)
T PRK08303        165 NATH-------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPH----  233 (305)
T ss_pred             cCcC-------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccc----
Confidence            2110       1122357 6676665555444332   47999999999886552100000000 00 00000110    


Q ss_pred             cccccccHHHHHHHHHHHhhCC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                       ..-+...+|++++++.++..+
T Consensus       234 -~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        234 -FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             -cccCCCHHHHHHHHHHHHcCc
Confidence             112346899999999998765

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.46  E-value=1.2e-12  Score=110.26  Aligned_cols=201  Identities=13%  Similarity=0.056  Sum_probs=128.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHh----CCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC------
Q 020254           25 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      .++||||+|.||.+++++|++    .|++|++++|+..........      ........+|+.|.++++++++      
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    799999999987653332110      1111234679999887776553      


Q ss_pred             -----CCcEEEECCCCCCC--CC----CChhHHHHHHHhhhhhHHHHHHHHhcC-C-C-C-CCcEEEEecccceeecCCC
Q 020254           89 -----GSTAVVNLAGTPIG--TR----WSSEIKKEIKESRIRVTSKVVDLINES-P-E-G-VRPSVLVSATALGYYGTSE  153 (328)
Q Consensus        89 -----~~d~vi~~a~~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~-~-~~~~v~~Ss~~v~~yg~~~  153 (328)
                           +.|+|||+||....  ..    ...+..+..+++|+.++..+..++.+. . . + ..++|++||...  +..  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~--~~~--  157 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA--IQP--  157 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHh--CCC--
Confidence                 12699999996322  11    124567789999999988887766542 1 1 2 357999999764  321  


Q ss_pred             cccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh------hhHHHHHHHcCCCCCCCC
Q 020254          154 TEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA------KMIPLFMMFAGGPLGSGQ  223 (328)
Q Consensus       154 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~  223 (328)
                             .+....| .+|...+.....+..+   .++.+.++.||.+-.+......      .....+.  ...|.    
T Consensus       158 -------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~----  224 (256)
T TIGR01500       158 -------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQ--ELKAK----  224 (256)
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHH--HHHhc----
Confidence                   1223457 6777666665554433   4799999999998765211000      0000010  01111    


Q ss_pred             cccccccHHHHHHHHHHHhhC
Q 020254          224 QWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~  244 (328)
                        ..+..++|+|..++.++.+
T Consensus       225 --~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 --GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             --CCCCCHHHHHHHHHHHHhc
Confidence              1267889999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.46  E-value=1.3e-11  Score=105.41  Aligned_cols=220  Identities=12%  Similarity=0.012  Sum_probs=133.6

Q ss_pred             cccCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCcccccC--------------CCCC---ccccCceee--
Q 020254           19 QKASQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF--------------PGKK---TRFFPGVMI--   77 (328)
Q Consensus        19 ~~~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~~---~~~~~~~d~--   77 (328)
                      +..+.+.++||||  +..||.++++.|.+.|.+|++ +|.........              ....   ......+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3356689999999  799999999999999999988 55432211110              0000   011334577  


Q ss_pred             cCCh------------------hhHhhc-------CCCcEEEECCCCCC-----CCCCChhHHHHHHHhhhhhHHHHHHH
Q 020254           78 AEEP------------------QWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDL  127 (328)
Q Consensus        78 ~~~~------------------~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~  127 (328)
                      .+++                  ++++++       .++|++|||||...     ......+.+...+++|+.++..++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3222                  444444       35899999997421     12345678899999999999999888


Q ss_pred             HhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC-Cch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCC
Q 020254          128 INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDG  201 (328)
Q Consensus       128 ~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~  201 (328)
                      +...-....++|++||...  ...         .|.. ..| .+|...+.....+..+    .++++..|-||.+-.+-.
T Consensus       164 ~~p~m~~~G~II~isS~a~--~~~---------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        164 FGPIMNPGGASISLTYIAS--ERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HHHHHhcCCEEEEEechhh--cCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence            7763112268999998654  211         1111 246 6777666665555442    479999999999877632


Q ss_pred             cchhhhHHHHHHH-cCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          202 GALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       202 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ......-...... ...|+      ..+...+|++.+++.++....  ..| ++.+.++
T Consensus       233 ~~~~~~~~~~~~~~~~~pl------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        233 KAIGFIDDMIEYSYANAPL------QKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             hcccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            1110000011111 11121      124678999999999987533  334 5666554

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.45  E-value=1.7e-12  Score=101.59  Aligned_cols=205  Identities=19%  Similarity=0.178  Sum_probs=139.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTR  104 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~  104 (328)
                      +.++.|+.||.|+++++...+.++.|..+.|+..+..... ......+.+.+....+-++..+.++..++.+++-.    
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~s-w~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf----  128 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSS-WPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF----  128 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhC-CCcccchhhccccccCcchhhhcCCcccHHHhcCc----
Confidence            6899999999999999999999999999999977433222 11111244566666666777888999999998752    


Q ss_pred             CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc
Q 020254          105 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN  183 (328)
Q Consensus       105 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~  183 (328)
                         .....+..+|-....+.+.++.+  .++++|+|+|...   ||-.+.-        ...| ..|...|.|....   
T Consensus       129 ---gn~~~m~~ing~ani~a~kaa~~--~gv~~fvyISa~d---~~~~~~i--------~rGY~~gKR~AE~Ell~~---  189 (283)
T KOG4288|consen  129 ---GNIILMDRINGTANINAVKAAAK--AGVPRFVYISAHD---FGLPPLI--------PRGYIEGKREAEAELLKK---  189 (283)
T ss_pred             ---cchHHHHHhccHhhHHHHHHHHH--cCCceEEEEEhhh---cCCCCcc--------chhhhccchHHHHHHHHh---
Confidence               22456777888888888899988  7999999999754   4422110        1234 5565555555433   


Q ss_pred             CCCeEEEEEeceEEcCCC--c---chhhhHHHH---HHHcCCCC----CCCCcccccccHHHHHHHHHHHhhCCCCCceE
Q 020254          184 KDVRLALIRIGIVLGKDG--G---ALAKMIPLF---MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI  251 (328)
Q Consensus       184 ~~~~~~ilRp~~v~g~~~--~---~~~~~~~~~---~~~~~~~~----~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~  251 (328)
                      ++.+-+++|||.+||...  +   ++......+   ....-.|+    .-+.-..+++.++++|.+.++++++|...|++
T Consensus       190 ~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~Gvv  269 (283)
T KOG4288|consen  190 FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKGVV  269 (283)
T ss_pred             cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCcee
Confidence            457789999999999842  1   111111111   11111121    23345577899999999999999999866665


Q ss_pred             Ee
Q 020254          252 NG  253 (328)
Q Consensus       252 ~i  253 (328)
                      .|
T Consensus       270 ~i  271 (283)
T KOG4288|consen  270 TI  271 (283)
T ss_pred             eH
Confidence            44

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.45  E-value=1.3e-11  Score=94.36  Aligned_cols=219  Identities=17%  Similarity=0.163  Sum_probs=139.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhc-------CCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCI-------QGST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-------~~~d   91 (328)
                      +.+..+||||+..||+++++.|.+.|++|.+.+++............   .-.-..+|+.+.+++...+       ..++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            34689999999999999999999999999999998775544332211   0112257888877666544       3689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC----CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +++||||+..+   .....++|.+++.+|+.+...+.+++.+.    ....-.+|.+||.- +--|.-....|.......
T Consensus        93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV-GkiGN~GQtnYAAsK~Gv  171 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV-GKIGNFGQTNYAASKGGV  171 (256)
T ss_pred             EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh-cccccccchhhhhhcCce
Confidence            99999998755   35567889999999999988777776553    12333799999863 223322211121111111


Q ss_pred             CchHHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          165 NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       165 ~~y~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      -. ..|...+...     +.++++..+.||.|-.|-...   +-+..  .+....|++.      +=..+|+|..++.+.
T Consensus       172 Ig-ftktaArEla-----~knIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~iPmgr------~G~~EevA~~V~fLA  236 (256)
T KOG1200|consen  172 IG-FTKTAARELA-----RKNIRVNVVLPGFIATPMTEA---MPPKVLDKILGMIPMGR------LGEAEEVANLVLFLA  236 (256)
T ss_pred             ee-eeHHHHHHHh-----hcCceEeEeccccccChhhhh---cCHHHHHHHHccCCccc------cCCHHHHHHHHHHHh
Confidence            11 2222222211     158999999999999885321   11111  3334445433      456789999998887


Q ss_pred             hCCC--CCc-eEEecCC
Q 020254          243 SNPS--YRG-VINGTAP  256 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~  256 (328)
                      ....  ..| .+.+.+|
T Consensus       237 S~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  237 SDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccccccceeEEEecc
Confidence            5433  223 6666665

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.45  E-value=4.2e-12  Score=109.91  Aligned_cols=209  Identities=21%  Similarity=0.156  Sum_probs=122.1

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCc--cccCceeecCC-hhhHhhcC----CCc
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKT--RFFPGVMIAEE-PQWRDCIQ----GST   91 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~d~~~~-~~~~~~~~----~~d   91 (328)
                      +.++++|+|+||||.+|+-+++.|+++|+.|+++.|+..+...... ....  ......+.... +.+.....    ...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            3456799999999999999999999999999999999887766654 1000  00111122222 22222222    345


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHH
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEV  171 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~  171 (328)
                      +++-+++......    +...-..+...+++++++||+.  .++++++++|+.+..-+.        ...+.........
T Consensus       156 ~v~~~~ggrp~~e----d~~~p~~VD~~g~knlvdA~~~--aGvk~~vlv~si~~~~~~--------~~~~~~~~~~~~~  221 (411)
T KOG1203|consen  156 IVIKGAGGRPEEE----DIVTPEKVDYEGTKNLVDACKK--AGVKRVVLVGSIGGTKFN--------QPPNILLLNGLVL  221 (411)
T ss_pred             eEEecccCCCCcc----cCCCcceecHHHHHHHHHHHHH--hCCceEEEEEeecCcccC--------CCchhhhhhhhhh
Confidence            6777766421111    1112235778999999999999  799999999987651111        1111111011122


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                      +.+...+.+...+|++++|+||+...-...........     ...........--.+.-.|+|+.++.++..+..
T Consensus       222 ~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~r~~vael~~~all~~~~  292 (411)
T KOG1203|consen  222 KAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVD-----DEKELLTVDGGAYSISRLDVAELVAKALLNEAA  292 (411)
T ss_pred             HHHHhHHHHHHhcCCCcEEEeccccccCCCCcceeccc-----CccccccccccceeeehhhHHHHHHHHHhhhhh
Confidence            22333333334579999999999877654321111100     000011111111367888999999999888763

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=6.4e-12  Score=103.24  Aligned_cols=202  Identities=12%  Similarity=0.066  Sum_probs=135.6

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhc-------C
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCI-------Q   88 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-------~   88 (328)
                      .+-....||||||++.+|+.++.+++++|..+.+.+.+.....+..+...   ......+|+++.+++.+..       .
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            34456789999999999999999999999999999998876554432211   1223458999988776554       3


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||+....   +.+.+.-+..+++|+.+......+....  ..+..++|-++|... ..|..          .
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG-~~g~~----------g  182 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAG-LFGPA----------G  182 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhc-ccCCc----------c
Confidence            789999999986542   3445666788899999877766555431  157788999999764 23322          1


Q ss_pred             CCch-HHHHHHHHHHH-----Hhcc-cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          164 GNDY-LAEVCREWEGT-----ALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~-----~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ..+| .+|.......+     ..+. ..|++.+.+.|+.+-...       +      .+ . ......++.+..+.+|+
T Consensus       183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm-------f------~~-~-~~~~~l~P~L~p~~va~  247 (300)
T KOG1201|consen  183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM-------F------DG-A-TPFPTLAPLLEPEYVAK  247 (300)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc-------c------CC-C-CCCccccCCCCHHHHHH
Confidence            2345 44433322211     1111 237999999998776321       1      11 0 12234567899999999


Q ss_pred             HHHHHhhCCC
Q 020254          237 LIYEALSNPS  246 (328)
Q Consensus       237 ~~~~~~~~~~  246 (328)
                      .++..+....
T Consensus       248 ~Iv~ai~~n~  257 (300)
T KOG1201|consen  248 RIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHcCC
Confidence            9999998765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.5e-12  Score=106.03  Aligned_cols=165  Identities=10%  Similarity=-0.044  Sum_probs=108.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc-------C-C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------Q-G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~-~   89 (328)
                      +.++++||||++.||.+++++|+++|++|++++|+..+......    .........+|+.|++++++++       . +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999998765433211    1111113346888888776554       3 6


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+||....    .+...+.....++.|+.++..++..+...  +. ....+|++||...  +.            
T Consensus        84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~--~~------------  149 (227)
T PRK08862         84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD--HQ------------  149 (227)
T ss_pred             CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC--CC------------
Confidence            8999999974221    12233455666777887776665544321  12 2458999998543  21            


Q ss_pred             CCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCC
Q 020254          163 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKD  200 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~  200 (328)
                      ....| .+|.........++.   ..++++..|.||.+-.+.
T Consensus       150 ~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        150 DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            12345 666655555444433   258999999999987773

>PLN00015 protochlorophyllide reductase

Probab=99.41  E-value=1.7e-12  Score=112.25  Aligned_cols=212  Identities=13%  Similarity=0.107  Sum_probs=126.6

Q ss_pred             EEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           27 SVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        27 lI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +||||++.||.+++++|+++| ++|++.+|+..........    ........+|+.|.++++++++       ++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            599999999999999999999 9999999986543322111    1111134679999888766553       589999


Q ss_pred             ECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC--CCcEEEEecccceeecCC-----Cc-c-----
Q 020254           95 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTS-----ET-E-----  155 (328)
Q Consensus        95 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~Ss~~v~~yg~~-----~~-~-----  155 (328)
                      |+||....    .....+..+..+++|+.++..++.++...  +.+  ..++|++||...  +-..     .. .     
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~--~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG--NTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc--ccccccccCCCccchhhh
Confidence            99997422    22345677889999999987776665442  122  468999999754  2110     00 0     


Q ss_pred             --------------cccCC-CCCCCch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCC-cchhhhHHHH-HH
Q 020254          156 --------------VFDES-SPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDG-GALAKMIPLF-MM  213 (328)
Q Consensus       156 --------------~~~e~-~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~-~~~~~~~~~~-~~  213 (328)
                                    +.++. .+....| .+|.........+..+    .|+.+++++||.|..... .......... ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~  238 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP  238 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence                          00011 1122346 6676544432222221    479999999999964321 1100001000 00


Q ss_pred             HcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          214 FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       214 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      ....+.      ..+..+++.|+.++.++....
T Consensus       239 ~~~~~~------~~~~~pe~~a~~~~~l~~~~~  265 (308)
T PLN00015        239 FQKYIT------KGYVSEEEAGKRLAQVVSDPS  265 (308)
T ss_pred             HHHHHh------cccccHHHhhhhhhhhccccc
Confidence            000010      114678999999998876543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=3.7e-12  Score=98.21  Aligned_cols=167  Identities=12%  Similarity=0.082  Sum_probs=109.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      ...+||||||+..||.+|+++|++.|.+|++.+|+.....+.........-..+|+.|.+..+++++       ..+++|
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            3468999999999999999999999999999999988766554332212233478888886665542       579999


Q ss_pred             ECCCCCCCCCCC-----hhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIGTRWS-----SEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||||+....++.     .+..++-..+|+.++..+..+...+  ++....+|.+||.-.  +-+-..         .|.|
T Consensus        84 NNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLa--fvPm~~---------~PvY  152 (245)
T COG3967          84 NNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA--FVPMAS---------TPVY  152 (245)
T ss_pred             ecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccc--cCcccc---------cccc
Confidence            999986443322     2334566789999988887776653  234556888888654  332222         2334


Q ss_pred             -HHHHHHHHHH--HH-hcccCCCeEEEEEeceEEcC
Q 020254          168 -LAEVCREWEG--TA-LKVNKDVRLALIRIGIVLGK  199 (328)
Q Consensus       168 -~~k~~~~~~~--~~-~~~~~~~~~~ilRp~~v~g~  199 (328)
                       ..|...-...  .. +....++.+.=+-|+.|-.+
T Consensus       153 caTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         153 CATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence             2232221111  11 11113688888889988875

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.37  E-value=4.9e-11  Score=100.19  Aligned_cols=223  Identities=17%  Similarity=0.096  Sum_probs=141.3

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-------CCccccCceeecCChhhHhhc----
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------KKTRFFPGVMIAEEPQWRDCI----   87 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~----   87 (328)
                      .....|.++||||+..||++++.+|.+.|.+|++.+|+.+........       ........+|+.+.++.++++    
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            345568999999999999999999999999999999998764332211       111123457888776555443    


Q ss_pred             ----CCCcEEEECCCCCCC----CCCChhHHHHHHHhhhh-hHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc
Q 020254           88 ----QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIR-VTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        88 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                          .+.|+++|+||....    .+...+.+..++++|+. +...+..++...  +.+...++++||...  +.....  
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~--~~~~~~--  159 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAG--VGPGPG--  159 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccc--ccCCCC--
Confidence                369999999997543    35667889999999999 466666666553  234556777777654  221111  


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-c-hhhhHHHHHHH----cCCCCCCCCccc
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-A-LAKMIPLFMMF----AGGPLGSGQQWF  226 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-~~~~~~~~~~~----~~~~~~~~~~~~  226 (328)
                            ....| .+|.....+....+.+   .|+++.++-||.|..+... . .......+...    ...|.+      
T Consensus       160 ------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~g------  227 (270)
T KOG0725|consen  160 ------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLG------  227 (270)
T ss_pred             ------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccC------
Confidence                  11356 6666666555444443   4899999999999987510 0 00001111111    111222      


Q ss_pred             ccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          227 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .+...+|++..+..+.....  ..| ...+.++.
T Consensus       228 r~g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  228 RVGTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             CccCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            25778999999998887643  223 55554443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.36  E-value=2.1e-11  Score=101.68  Aligned_cols=198  Identities=12%  Similarity=0.014  Sum_probs=127.3

Q ss_pred             HHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC----CCcEEEECCCCCCCCCCChhHHHHHH
Q 020254           39 LVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGTPIGTRWSSEIKKEIK  114 (328)
Q Consensus        39 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~~~  114 (328)
                      ++++|+++|++|++++|+..+... .      .+..+|+.|.+++.++++    ++|+|||+||...     ....+..+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-~------~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~~~~~~~~   68 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-D------GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----TAPVELVA   68 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-h------HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----CCCHHHhh
Confidence            478899999999999998765321 0      145689999998887775    5899999999642     23467889


Q ss_pred             HhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccccc------------------CCCCCCCch-HHHHHHHH
Q 020254          115 ESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD------------------ESSPSGNDY-LAEVCREW  175 (328)
Q Consensus       115 ~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~------------------e~~~~~~~y-~~k~~~~~  175 (328)
                      ++|+.++..+++++.+......++|++||...  |+.....+..                  ...+....| .+|...+.
T Consensus        69 ~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         69 RVNFLGLRHLTEALLPRMAPGGAIVNVASLAG--AEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhchHHHHHHHHHHHHhccCCcEEEEeCcHHh--hccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence            99999999999998763123368999999887  6532211111                  112234567 77777666


Q ss_pred             HHHHhc----ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHc-CCCCCCCCcccccccHHHHHHHHHHHhhCCC--CC
Q 020254          176 EGTALK----VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YR  248 (328)
Q Consensus       176 ~~~~~~----~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~  248 (328)
                      ....++    ...|+++++|+||.+.++-............... ..+      ...+...+|+|++++.++....  ..
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------~~~~~~pe~va~~~~~l~s~~~~~~~  220 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKR------MGRPATADEQAAVLVFLCSDAARWIN  220 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccc------cCCCCCHHHHHHHHHHHcChhhcCcc
Confidence            554444    3358999999999998874221110000000000 011      1125678999999999886432  33


Q ss_pred             c-eEEecCC
Q 020254          249 G-VINGTAP  256 (328)
Q Consensus       249 g-~~~i~~~  256 (328)
                      | ...+.++
T Consensus       221 G~~i~vdgg  229 (241)
T PRK12428        221 GVNLPVDGG  229 (241)
T ss_pred             CcEEEecCc
Confidence            4 4555444

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.36  E-value=2.2e-12  Score=101.32  Aligned_cols=145  Identities=21%  Similarity=0.145  Sum_probs=102.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecC--CCccccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS--RSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      |+++||||+|.||..++++|+++| +.|++++|+  ......+    ........+..+|+.+.++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            479999999999999999999995 688888888  2222222    1111222244578888887776663       6


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      .|++||++|.....   ....+.....++.|+.+...+.+++..  .+..++|++||...  .-+         .|....
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~--~~~---------~~~~~~  147 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAG--VRG---------SPGMSA  147 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGG--TSS---------STTBHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhh--ccC---------CCCChh
Confidence            89999999986532   233477788999999999999999988  66788999999775  211         123345


Q ss_pred             h-HHHHHHHHHHHHhc
Q 020254          167 Y-LAEVCREWEGTALK  181 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~  181 (328)
                      | .+|.........++
T Consensus       148 Y~askaal~~~~~~la  163 (167)
T PF00106_consen  148 YSASKAALRGLTQSLA  163 (167)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            6 66766666555443

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.32  E-value=4.9e-10  Score=95.81  Aligned_cols=220  Identities=10%  Similarity=-0.002  Sum_probs=129.4

Q ss_pred             ccCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCC---------Ccccc--c--CCCCC-----ccccCceeecC
Q 020254           20 KASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR---------SKAEL--I--FPGKK-----TRFFPGVMIAE   79 (328)
Q Consensus        20 ~~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--~--~~~~~-----~~~~~~~d~~~   79 (328)
                      ..+.|.++||||+  ..||+++++.|.++|++|++.++.+         .....  .  .....     .......|+.+
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            3456789999995  8999999999999999999876531         00000  0  00000     00000123333


Q ss_pred             Ch------------------hhHhhc-------CCCcEEEECCCCCC-----CCCCChhHHHHHHHhhhhhHHHHHHHHh
Q 020254           80 EP------------------QWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLIN  129 (328)
Q Consensus        80 ~~------------------~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (328)
                      .+                  ++++++       .++|++||+||...     ..+...+.++..+++|+.++..+..++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            32                  233333       36899999997532     1234567788999999999999998887


Q ss_pred             cCCCCCCcEEEEecccceeecCCCcccccCCCCCC-Cch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCCcc
Q 020254          130 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGA  203 (328)
Q Consensus       130 ~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~  203 (328)
                      ..-....+++.+||...  .-.         .|.. ..| .+|.........+..+    +|+++..|.||.+-.+....
T Consensus       165 p~m~~~G~ii~iss~~~--~~~---------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~  233 (299)
T PRK06300        165 PIMNPGGSTISLTYLAS--MRA---------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA  233 (299)
T ss_pred             HHhhcCCeEEEEeehhh--cCc---------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc
Confidence            64122356888887543  111         1111 247 7777666655444432    38999999999987663211


Q ss_pred             hhhhHHHHHH-HcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          204 LAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       204 ~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ....-..... ....|+      ..+...+|++.++.+++....  ..| ++.+.++
T Consensus       234 ~~~~~~~~~~~~~~~p~------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        234 IGFIERMVDYYQDWAPL------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             ccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            1000011111 111121      124678999999999887533  334 6666554

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.31  E-value=3.2e-12  Score=106.67  Aligned_cols=209  Identities=16%  Similarity=0.106  Sum_probs=135.3

Q ss_pred             cCC--chhHHHHHHHHHhCCCeEEEEecCCCcc----cccCCCCCccccCceeecCChhhHhhc--------CCCcEEEE
Q 020254           30 GAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA----ELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVVN   95 (328)
Q Consensus        30 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~vi~   95 (328)
                      |++  +.||.++++.|+++|++|++.+|+..+.    .++....... ...+|+.+.+++++++        .++|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999998762    2222111111 3568898888777663        46899999


Q ss_pred             CCCCCCC----CC---CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           96 LAGTPIG----TR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        96 ~a~~~~~----~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      +++....    ..   ...+.+...++.|+.+...+++++.+.......+|++||...  ...         .+....| 
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~--~~~---------~~~~~~y~  148 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA--QRP---------MPGYSAYS  148 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG--TSB---------STTTHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh--ccc---------CccchhhH
Confidence            9987543    12   234677888899999998888887553122367899998754  221         1222356 


Q ss_pred             HHHHHHHHHHHHhcc---c-CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 LAEVCREWEGTALKV---N-KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~---~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      ..|...+.....++.   . .|+++.+|.||.+..+........-... ......|++.      +...+|+|.+++.++
T Consensus       149 ~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r------~~~~~evA~~v~fL~  222 (241)
T PF13561_consen  149 ASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGR------LGTPEEVANAVLFLA  222 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSS------HBEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCC------CcCHHHHHHHHHHHh
Confidence            566555554433332   2 5899999999998866321111101111 1122233322      568999999999999


Q ss_pred             hCCC--CCc-eEEecCC
Q 020254          243 SNPS--YRG-VINGTAP  256 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~  256 (328)
                      ....  ..| ++.+.+|
T Consensus       223 s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  223 SDAASYITGQVIPVDGG  239 (241)
T ss_dssp             SGGGTTGTSEEEEESTT
T ss_pred             CccccCccCCeEEECCC
Confidence            8653  444 7776655

...

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.30  E-value=3.4e-11  Score=101.10  Aligned_cols=166  Identities=16%  Similarity=0.113  Sum_probs=113.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--ccc---CC-CC-CccccCceeecC-ChhhHhhcC----
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELI---FP-GK-KTRFFPGVMIAE-EPQWRDCIQ----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~---~~-~~-~~~~~~~~d~~~-~~~~~~~~~----   88 (328)
                      .++++|+||||++.||.++++.|++.|++|+++.|+....  ...   .. .. .......+|+.+ .+.++.+++    
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999988888876541  111   11 00 011234578887 776665542    


Q ss_pred             ---CCcEEEECCCCCC----CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 ---GSTAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 ---~~d~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                         ++|+++|+||...    ......+..+..+++|+.+...+..++..... .+++|++||...  . .....      
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~Iv~isS~~~--~-~~~~~------  152 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQRIVNISSVAG--L-GGPPG------  152 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hCeEEEECCchh--c-CCCCC------
Confidence               5899999999742    23445578899999999999888885554211 128899998765  2 11110      


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEc
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLG  198 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g  198 (328)
                        ...| .+|.........++.+   .|+.+..+.||.+-.
T Consensus       153 --~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t  191 (251)
T COG1028         153 --QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT  191 (251)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence              2456 6777766665555533   489999999995443

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.27  E-value=1.1e-10  Score=99.82  Aligned_cols=178  Identities=13%  Similarity=0.143  Sum_probs=113.3

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ++..+|+||+|+|++|.+|+.++..|..++  .++..+++......... .+... .....+..|+.++.+.++++|+||
T Consensus         3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~-~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT-PAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc-CceEEEecCCCchHHHhCCCCEEE
Confidence            445677899999999999999999998655  68999999322221111 00000 011234556566678999999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC--CCCCch-HHHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS--PSGNDY-LAEV  171 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~--~~~~~y-~~k~  171 (328)
                      +++|.+..   ....+.+.+..|+..++++++++++  .+.+++|+++|-.+.....-....+.+..  |+...| .+.+
T Consensus        82 itaG~~~~---~~~tR~dll~~N~~i~~~i~~~i~~--~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~L  156 (321)
T PTZ00325         82 ICAGVPRK---PGMTRDDLFNTNAPIVRDLVAAVAS--SAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTL  156 (321)
T ss_pred             ECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhH
Confidence            99997522   2235678899999999999999999  79999999999766211100000001222  222233 2223


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCc
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGG  202 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  202 (328)
                      -........+...++....++ +.|+|.+++
T Consensus       157 Ds~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        157 DVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            333333334444577777777 888887654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.24  E-value=7.3e-11  Score=91.57  Aligned_cols=167  Identities=14%  Similarity=0.033  Sum_probs=114.1

Q ss_pred             cCCCeEEEEcC-CchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--------CCc
Q 020254           21 ASQMTVSVTGA-TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GST   91 (328)
Q Consensus        21 ~~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d   91 (328)
                      ...++|||||+ .|.||.+|++++.+.|+.|++..|+.+....+...... ...++|+.+++.+.+...        +.|
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl-~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGL-KPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCC-eeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            44578999975 58999999999999999999999998876665422110 123589999988776542        579


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      .++|+||..-.   .+.....-+..+++|+.|..+..++.... -.....+|++.|..+  |-+         .|....|
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~--~vp---------fpf~~iY  152 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG--VVP---------FPFGSIY  152 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE--Eec---------cchhhhh
Confidence            99999996422   23445666888999999987777776542 123457999999776  332         1234456


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcC
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGK  199 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~  199 (328)
                       .+|...-.....+..+   +|++++.+-+|.|-..
T Consensus       153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             hHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence             5554444443333322   4788887777777654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.23  E-value=4.2e-11  Score=102.11  Aligned_cols=222  Identities=15%  Similarity=0.048  Sum_probs=136.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ...+.++|||||+.||.+.++.|+.+|.+|+...|+..........      .....+..+|+.+.+++++..+      
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            3457999999999999999999999999999999998543332211      1111235689998887776553      


Q ss_pred             -CCcEEEECCCCCCCCC-CChhHHHHHHHhhhhhHHHHHHHHhcC-C-CCCCcEEEEecccceeecCCCcccccCCCC--
Q 020254           89 -GSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLVSATALGYYGTSETEVFDESSP--  162 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--  162 (328)
                       ..|++|++||+..... ...+..+..+.+|..|+..+.+.+... + ....|+|++||... .........-.+...  
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~  191 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLY  191 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCc
Confidence             6799999999865433 334567888899999987777666542 1 23379999999763 011111111222211  


Q ss_pred             -CCCch-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          163 -SGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       163 -~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                       ....| .+|.+.......+..+.  |+.+..+.||.+.++.-.....+...+......++        +-..++-|+..
T Consensus       192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~--------~ks~~~ga~t~  263 (314)
T KOG1208|consen  192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPL--------TKSPEQGAATT  263 (314)
T ss_pred             cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHh--------ccCHHHHhhhe
Confidence             11235 55655544433333322  79999999999998853222122222211101000        12467778888


Q ss_pred             HHHhhCCC---CCceE
Q 020254          239 YEALSNPS---YRGVI  251 (328)
Q Consensus       239 ~~~~~~~~---~~g~~  251 (328)
                      +.++.+++   ..|.|
T Consensus       264 ~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  264 CYAALSPELEGVSGKY  279 (314)
T ss_pred             ehhccCccccCccccc
Confidence            88887775   34455

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.23  E-value=2.4e-10  Score=94.51  Aligned_cols=166  Identities=19%  Similarity=0.167  Sum_probs=118.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-Cc-cccCceeecCChhhHhhcC---------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KT-RFFPGVMIAEEPQWRDCIQ---------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~d~~~~~~~~~~~~---------~~   90 (328)
                      ..+-|+|||+-...|..++++|.++|+.|.+-.-.++....+.... .. ......|++++++++++.+         +.
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            3467999999999999999999999999999986665544433222 10 1123689999999987763         45


Q ss_pred             cEEEECCCCCC---CCCCC-hhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPI---GTRWS-SEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~---~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      =.||||||+..   ..+|. .++....+++|+.|+.++..+.... +....|+|++||.+-           .-..|...
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G-----------R~~~p~~g  176 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG-----------RVALPALG  176 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc-----------CccCcccc
Confidence            78999999542   23443 4778899999999988887777664 345679999999764           11223344


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcC
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGK  199 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~  199 (328)
                      .| .+|...+......+.+   +|+++.++-|| +|-.
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T  213 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT  213 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence            56 7777666665554443   59999999999 4444

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.22  E-value=2.5e-10  Score=94.25  Aligned_cols=207  Identities=16%  Similarity=0.111  Sum_probs=132.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc------cccCceeecCChhhHhhcC-------CC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT------RFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+|+||||+..||..++..+..+|++|+++.|+..+..+.......      ..+..+|+.|++++...++       .+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            5899999999999999999999999999999998876555433221      1133467888887776664       47


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |.+|+|||....   .+.+....+..+++|..++.+++.++...   +....+++++||... .+|-..-   ....|  
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a-~~~i~Gy---saYs~--  187 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA-MLGIYGY---SAYSP--  187 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh-hcCcccc---ccccc--
Confidence            999999997543   34456677888899999999998877652   122337888887542 2331111   10111  


Q ss_pred             CchHHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          165 NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       165 ~~y~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      ..+..+...+....... ..++.++..-|+.+-.|+-..-++-.|.. ...        +..-+.+..+++|.+++.-+.
T Consensus       188 sK~alrgLa~~l~qE~i-~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii--------~g~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  188 SKFALRGLAEALRQELI-KYGVHVTLYYPPDTLTPGFERENKTKPEETKII--------EGGSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             HHHHHHHHHHHHHHHHh-hcceEEEEEcCCCCCCCccccccccCchheeee--------cCCCCCcCHHHHHHHHHhHHh
Confidence            11222222222222111 24888998889988888632222222211 111        112345889999999998887


Q ss_pred             CC
Q 020254          244 NP  245 (328)
Q Consensus       244 ~~  245 (328)
                      +.
T Consensus       259 rg  260 (331)
T KOG1210|consen  259 RG  260 (331)
T ss_pred             hc
Confidence            63

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.22  E-value=1.9e-10  Score=91.31  Aligned_cols=157  Identities=13%  Similarity=0.158  Sum_probs=102.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCccc-------ccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +++||||+|.||..+++.|.+++ .+|++++|++....       ++........+.++|+.|++++.+++.       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999997 58999999942211       111222222355789999998888773       4


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ++.|||+|+....   .+...+.....+..-+.++.++.++...  ...+.+|++||... .+|...          ...
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~-~~G~~g----------q~~  148 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISS-LLGGPG----------QSA  148 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHH-HTT-TT----------BHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhH-hccCcc----------hHh
Confidence            6889999997544   2344566777788889999999999988  78889999999764 255332          234


Q ss_pred             h-HHHHHHHHHHHHhcccCCCeEEEEEece
Q 020254          167 Y-LAEVCREWEGTALKVNKDVRLALIRIGI  195 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~  195 (328)
                      | .+....+........ .+.++.++..+.
T Consensus       149 YaaAN~~lda~a~~~~~-~g~~~~sI~wg~  177 (181)
T PF08659_consen  149 YAAANAFLDALARQRRS-RGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence            6 445555555444443 488888887664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.17  E-value=2.2e-09  Score=84.42  Aligned_cols=207  Identities=17%  Similarity=0.195  Sum_probs=122.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCcc-cccCCC---CCccccCceeecCChhhHhhc--------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKA-ELIFPG---KKTRFFPGVMIAEEPQWRDCI--------   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~-~~~~~~---~~~~~~~~~d~~~~~~~~~~~--------   87 (328)
                      .++.|+||||+..||-.|+++|++. |.++++. .|++++. .++...   .......++|+.+.+++++..        
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3467999999999999999999975 5555444 5546552 221111   111124467888777666554        


Q ss_pred             -CCCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCC-----------cEEEEecccceee
Q 020254           88 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVR-----------PSVLVSATALGYY  149 (328)
Q Consensus        88 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~-----------~~v~~Ss~~v~~y  149 (328)
                       ++.|.+|++||+...    .......+..-+++|..++..+.+++..+  +...+           .+|++||.+.. -
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s-~  160 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS-I  160 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc-c
Confidence             378999999997433    22334556777899998876665554321  01112           68889997753 1


Q ss_pred             cCCCcccccCCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcc
Q 020254          150 GTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW  225 (328)
Q Consensus       150 g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (328)
                      +...       ......| .+|.+.-........   ..++-++.+.||+|-..-++                      .
T Consensus       161 ~~~~-------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg----------------------~  211 (249)
T KOG1611|consen  161 GGFR-------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG----------------------K  211 (249)
T ss_pred             CCCC-------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC----------------------C
Confidence            1100       1122356 556555444433332   23778889999999876432                      1


Q ss_pred             cccccHHHHHHHHHHHhhC--CCCCc-eEEecCCCcc
Q 020254          226 FSWIHLDDIVNLIYEALSN--PSYRG-VINGTAPNPV  259 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~--~~~~g-~~~i~~~~~~  259 (328)
                      ...+.+++-+.-++..+.+  ++.+| .||- ++.++
T Consensus       212 ~a~ltveeSts~l~~~i~kL~~~hnG~ffn~-dlt~i  247 (249)
T KOG1611|consen  212 KAALTVEESTSKLLASINKLKNEHNGGFFNR-DGTPI  247 (249)
T ss_pred             CcccchhhhHHHHHHHHHhcCcccCcceEcc-CCCcC
Confidence            2246777777777776654  22444 5554 43433

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.13  E-value=1.3e-10  Score=87.19  Aligned_cols=208  Identities=18%  Similarity=0.148  Sum_probs=136.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcC---CCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a   97 (328)
                      ..+.|++||+.-.||+.+++.|.+.|.+|+++.|.+.....+..... ...-...|+.+-+.+++.+.   ..|-++|+|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA   85 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA   85 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence            34689999999999999999999999999999999887655543211 01123467777777777775   469999999


Q ss_pred             CCCCCCCCC---hhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIGTRWS---SEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      |..-...+.   .+.....+++|+.+..++.+...+.   +.-...+|.+||.+.  -.     ++    .-...| ..|
T Consensus        86 gvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas--~R-----~~----~nHtvYcatK  154 (245)
T KOG1207|consen   86 GVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS--IR-----PL----DNHTVYCATK  154 (245)
T ss_pred             hhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc--cc-----cc----CCceEEeecH
Confidence            975333332   3445566789999887777764331   133446999999764  11     11    112346 666


Q ss_pred             HHHHHHHHHhcccC---CCeEEEEEeceEEcCCC-cchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          171 VCREWEGTALKVNK---DVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       171 ~~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .........++.+-   .+++..+-|..|...-+ +.++.-...-.++...|+      .-+..+++++.++..++.+..
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl------~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL------KRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch------hhhhHHHHHHhhheeeeecCc
Confidence            66666665555543   68899999999986632 122111111112222333      237889999999999988755

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.10  E-value=1e-09  Score=115.50  Aligned_cols=165  Identities=15%  Similarity=0.150  Sum_probs=115.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCccc---------------------------------------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAE---------------------------------------   61 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~---------------------------------------   61 (328)
                      +.+.+|||||+|.||..++++|+++ |.+|++++|++....                                       
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4579999999999999999999988 699999999831000                                       


Q ss_pred             ------------ccCCCCCccccCceeecCChhhHhhcC------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhh
Q 020254           62 ------------LIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRV  120 (328)
Q Consensus        62 ------------~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~  120 (328)
                                  .+...+....+..+|+.|.+++.+++.      ++|.|||+||....   .....+.+..++++|+.+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                        000001111234679999988876664      58999999997533   234567888999999999


Q ss_pred             HHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhcccC-CCeEEEEEeceEEc
Q 020254          121 TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLG  198 (328)
Q Consensus       121 ~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~-~~~~~ilRp~~v~g  198 (328)
                      +.++++++..  ...+++|++||... ++|..          ....| .+|.........+..+. ++++..+.||.+-+
T Consensus      2156 ~~~Ll~al~~--~~~~~IV~~SSvag-~~G~~----------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2156 LLSLLAALNA--ENIKLLALFSSAAG-FYGNT----------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHH--hCCCeEEEEechhh-cCCCC----------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence            9999999987  55678999999763 25532          12356 55544444443333332 67899999998866


Q ss_pred             C
Q 020254          199 K  199 (328)
Q Consensus       199 ~  199 (328)
                      .
T Consensus      2223 g 2223 (2582)
T TIGR02813      2223 G 2223 (2582)
T ss_pred             C
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.99  E-value=5e-09  Score=90.45  Aligned_cols=105  Identities=11%  Similarity=0.160  Sum_probs=74.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCCCc--ccccCCCCCcc--ccCceeecCChhhHhhcCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK--AELIFPGKKTR--FFPGVMIAEEPQWRDCIQGST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d   91 (328)
                      +.||+||||+|++|++++..|+..+       .+|+++++++..  ...........  ... .++....++.+.++++|
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~-~~~~~~~~~~~~l~~aD   80 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLL-KSVVATTDPEEAFKDVD   80 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcccccc-CCceecCCHHHHhCCCC
Confidence            5689999999999999999998844       589999997642  11110000000  011 13333566778889999


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      +|||+||.+..   ...+..+.++.|+.-.+.+.+.+.+.
T Consensus        81 iVI~tAG~~~~---~~~~R~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          81 VAILVGAMPRK---EGMERKDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             EEEEeCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999997522   23446788999999999999999883

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=98.98  E-value=1e-08  Score=87.96  Aligned_cols=171  Identities=13%  Similarity=0.136  Sum_probs=111.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +.||+|+|++|.+|+.++..|..++  .++.++++++.....+. .+.. ......++.+.+++.+.++++|+|||+||.
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~-~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHIN-TPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCC-cCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            4699999999999999999999766  48999999772221111 0000 001112444666788999999999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC--CCCCch-HHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS--PSGNDY-LAEVCREWE  176 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~--~~~~~y-~~k~~~~~~  176 (328)
                      +..   ....+.+.+..|....+++++.+.+  .+.+.+++++|--+-.+..--.....+.+  |+...| ..+.-.+..
T Consensus        97 ~~~---~g~~R~dll~~N~~i~~~i~~~i~~--~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl  171 (323)
T PLN00106         97 PRK---PGMTRDDLFNINAGIVKTLCEAVAK--HCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRA  171 (323)
T ss_pred             CCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHH
Confidence            522   2345788899999999999999999  67888999988544100000000111222  233334 444555566


Q ss_pred             HHHhcccCCCeEEEEEeceEEcCC
Q 020254          177 GTALKVNKDVRLALIRIGIVLGKD  200 (328)
Q Consensus       177 ~~~~~~~~~~~~~ilRp~~v~g~~  200 (328)
                      ....+...+++...++ +.|+|.+
T Consensus       172 ~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        172 NTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHHhCCChhheE-EEEEEeC
Confidence            6666666788877774 4555554

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.95  E-value=1.1e-09  Score=86.06  Aligned_cols=100  Identities=17%  Similarity=0.103  Sum_probs=72.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      |+++||||||++|. +++.|.+.|++|++++|++.....+..   .........+|+.|.+++.++++       ++|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            68999999998876 999999999999999998655433221   11111133468999888876663       46788


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC----cEEEEeccc
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR----PSVLVSATA  145 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~v~~Ss~~  145 (328)
                      |+.+.                   ..++.++.++|++  .+++    +++++=.+.
T Consensus        80 v~~vh-------------------~~~~~~~~~~~~~--~gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         80 VAWIH-------------------SSAKDALSVVCRE--LDGSSETYRLFHVLGSA  114 (177)
T ss_pred             EEecc-------------------ccchhhHHHHHHH--HccCCCCceEEEEeCCc
Confidence            87754                   4467799999999  6777    777776544

>PRK06720 hypothetical protein; Provisional

Probab=98.95  E-value=3.9e-09  Score=82.43  Aligned_cols=126  Identities=13%  Similarity=0.081  Sum_probs=77.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCChhhHhhc-------CCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCI-------QGS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~-------~~~   90 (328)
                      +.+.++||||+|.||.++++.|.+.|++|++++|+.......    ...........+|+.+.+++.+++       .++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999886543221    111111113467888877776543       368


Q ss_pred             cEEEECCCCCCCC-CCChhHHHHHHHhhhhh----HHHHHHHHhcC-----CCCCCcEEEEecccce
Q 020254           91 TAVVNLAGTPIGT-RWSSEIKKEIKESRIRV----TSKVVDLINES-----PEGVRPSVLVSATALG  147 (328)
Q Consensus        91 d~vi~~a~~~~~~-~~~~~~~~~~~~~n~~~----~~~l~~~~~~~-----~~~~~~~v~~Ss~~v~  147 (328)
                      |++||+||..... .+.....++....|+.+    ++.+.....+.     .....+|..+||.+..
T Consensus        95 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         95 DMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999974321 11111111122344443    33333333231     2345678888887653

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.94  E-value=2e-08  Score=79.20  Aligned_cols=210  Identities=13%  Similarity=0.046  Sum_probs=127.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..+++++||+.|.||..+.++|+++|..+.++.-+.+........     .....+.++|+.+..+++++++       .
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            357899999999999999999999998877776665543222111     1112356789998877777664       5


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhh----HHHHHHHHhcCCC-CCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRV----TSKVVDLINESPE-GVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      .|++||.||+.     .+.+++..+.+|+.+    +...+.+..+... ...-+|.+||..-  ..+-+-         .
T Consensus        84 iDIlINgAGi~-----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G--L~P~p~---------~  147 (261)
T KOG4169|consen   84 IDILINGAGIL-----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG--LDPMPV---------F  147 (261)
T ss_pred             eEEEEcccccc-----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc--cCcccc---------c
Confidence            79999999975     355678888888876    5556666665311 2334677777532  222211         2


Q ss_pred             Cch-HHHH------HHHHHHHHhcccCCCeEEEEEeceEEcCCC------cchhhhHHHH-HHHcCCCCCCCCccccccc
Q 020254          165 NDY-LAEV------CREWEGTALKVNKDVRLALIRIGIVLGKDG------GALAKMIPLF-MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       165 ~~y-~~k~------~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  230 (328)
                      +.| .+|.      +...-...+. ++|+.+..++||.+-..-.      +.+-.....+ ...+         ...--.
T Consensus       148 pVY~AsKaGVvgFTRSla~~ayy~-~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~---------~~~~q~  217 (261)
T KOG4169|consen  148 PVYAASKAGVVGFTRSLADLAYYQ-RSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALE---------RAPKQS  217 (261)
T ss_pred             hhhhhcccceeeeehhhhhhhhHh-hcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHH---------HcccCC
Confidence            233 2221      0111111222 3699999999997654310      0000011111 1111         112356


Q ss_pred             HHHHHHHHHHHhhCCCCCceEEecCCC
Q 020254          231 LDDIVNLIYEALSNPSYRGVINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~~~g~~~i~~~~  257 (328)
                      ..+++..++.+++.+..+-+|-+..+.
T Consensus       218 ~~~~a~~~v~aiE~~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  218 PACCAINIVNAIEYPKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHHHHHHhhccCCcEEEEecCc
Confidence            688999999999987644488887765

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.93  E-value=2.7e-09  Score=88.33  Aligned_cols=166  Identities=17%  Similarity=0.146  Sum_probs=108.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-----ccccCceeecCChh----hHhhcCC--CcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQ----WRDCIQG--STA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~~~~~----~~~~~~~--~d~   92 (328)
                      .=..|||||..||++.+++|+++|++|++++|+.++.....++..     +.....+|+.+++.    +++.+.+  +-+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            458999999999999999999999999999999988766543322     12234578886553    5555654  567


Q ss_pred             EEECCCCCCCC-----CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           93 VVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        93 vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+|.....     .......+.+..+|+.++..+.+.....  ..+...++++||.+.  --         ..|...
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag--~~---------p~p~~s  198 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAG--LI---------PTPLLS  198 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccc--cc---------cChhHH
Confidence            99999975421     1122244667788888866666655442  145567889988654  11         012223


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCC
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD  200 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~  200 (328)
                      .| .+|...+.....+..+   .|+.+..+-|..|-++.
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            44 4444333332222222   48999999999988874

>PRK05086 malate dehydrogenase; Provisional

Probab=98.78  E-value=1e-07  Score=82.02  Aligned_cols=116  Identities=13%  Similarity=0.143  Sum_probs=80.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      |||+|+||+|.+|++++..|..   .++++++++|++.................+.-.+.+++.+.++++|+||.++|..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~   80 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA   80 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence            6899999999999999998854   3468888888754211000000000000111123456677888999999999975


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  144 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~  144 (328)
                      ...   .....+.+..|....+++++++.+  .+.++++.+.|-
T Consensus        81 ~~~---~~~R~dll~~N~~i~~~ii~~i~~--~~~~~ivivvsN  119 (312)
T PRK05086         81 RKP---GMDRSDLFNVNAGIVKNLVEKVAK--TCPKACIGIITN  119 (312)
T ss_pred             CCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccC
Confidence            332   335678899999999999999999  688888888873

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.73  E-value=3.3e-08  Score=85.98  Aligned_cols=76  Identities=24%  Similarity=0.199  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ||+|+|+|+ |++|+.++..|+++| .+|++.+|+..+..+..... .......+|..|.+++.+++++.|+|||++..
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            689999997 999999999999998 99999999987766653321 11124468999999999999999999999875

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.66  E-value=9e-08  Score=78.55  Aligned_cols=72  Identities=13%  Similarity=0.213  Sum_probs=46.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC----hhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE----PQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~d~vi~~a~~   99 (328)
                      .|++=-.+||++|.+|++.|+++|++|++++|+..........     ...+.+...    +.+.+.+.++|+|||+||.
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~-----v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAv   91 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPN-----LSIIEIENVDDLLETLEPLVKDHDVLIHSMAV   91 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCC-----eEEEEEecHHHHHHHHHHHhcCCCEEEeCCcc
Confidence            3444446699999999999999999999998764321100000     111222222    3455566789999999997


Q ss_pred             C
Q 020254          100 P  100 (328)
Q Consensus       100 ~  100 (328)
                      .
T Consensus        92 s   92 (229)
T PRK06732         92 S   92 (229)
T ss_pred             C
Confidence            5

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.65  E-value=8.9e-08  Score=72.04  Aligned_cols=222  Identities=17%  Similarity=0.181  Sum_probs=134.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +..--+||||.+.+|.+-++.|.++|..|..++...++.....+. +....+...|+++.+++..++.       ..|+.
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            344689999999999999999999999999999988776555433 2223356688988888887763       57999


Q ss_pred             EECCCCCCC---------CCCChhHHHHHHHhhhhhHHHHHHHHhcC------CCCCCcEEEEecccceeecCCCccc-c
Q 020254           94 VNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES------PEGVRPSVLVSATALGYYGTSETEV-F  157 (328)
Q Consensus        94 i~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~v~~Ss~~v~~yg~~~~~~-~  157 (328)
                      +||||....         .....++.+.++++|+.++.|++......      -.+.+|=|.+-+.+|+.|....+.. +
T Consensus        88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaay  167 (260)
T KOG1199|consen   88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAY  167 (260)
T ss_pred             eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhh
Confidence            999996422         23334677888899999999998765432      1344566667776665566443322 1


Q ss_pred             cCCCCCCCchHHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          158 DESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       158 ~e~~~~~~~y~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      +...-..-....    .. ...+. --|++++.+-||.+-.|--..+..-...+   ..+.+..+   ..+-|..+-+..
T Consensus       168 saskgaivgmtl----pi-ardla-~~gir~~tiapglf~tpllsslpekv~~f---la~~ipfp---srlg~p~eyahl  235 (260)
T KOG1199|consen  168 SASKGAIVGMTL----PI-ARDLA-GDGIRFNTIAPGLFDTPLLSSLPEKVKSF---LAQLIPFP---SRLGHPHEYAHL  235 (260)
T ss_pred             hcccCceEeeec----hh-hhhcc-cCceEEEeecccccCChhhhhhhHHHHHH---HHHhCCCc---hhcCChHHHHHH
Confidence            111110000000    00 00111 13889998888876666332222222111   11111111   124466677777


Q ss_pred             HHHHhhCCCCCc-eEEecC
Q 020254          238 IYEALSNPSYRG-VINGTA  255 (328)
Q Consensus       238 ~~~~~~~~~~~g-~~~i~~  255 (328)
                      +..+++++-.+| +..+.+
T Consensus       236 vqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  236 VQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHhCcccCCeEEEecc
Confidence            777788876555 555543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.62  E-value=2.1e-07  Score=73.49  Aligned_cols=205  Identities=18%  Similarity=0.107  Sum_probs=121.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeE--EEEecCCCcccccCCCC-CccccCceeecCChhh---HhhcC----CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQV--RVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQW---RDCIQ----GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V--~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~---~~~~~----~~d   91 (328)
                      +.+-||+||++..||..++..+...+-+.  .+..|.......+.... ........|+.....+   .++.+    +-|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            44569999999999999999999877543  33444433321111110 0000111222222222   22221    579


Q ss_pred             EEEECCCCCCC------CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCC--CCcEEEEecccceeecCCCcccccCCCC
Q 020254           92 AVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEG--VRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        92 ~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~--~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      .|||+||....      .....+.++.+++.|+.+...+..++... +..  .+.+|++||.+.  --     |+    +
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa--v~-----p~----~  153 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA--VR-----PF----S  153 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh--hc-----cc----c
Confidence            99999997654      24456788999999999998888877653 222  467899999775  11     11    1


Q ss_pred             CCCch-HHHHHHHHHHHHhccc-C-CCeEEEEEeceEEcCCCc---chhhhHH----HHHHHcCCCCCCCCcccccccHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN-K-DVRLALIRIGIVLGKDGG---ALAKMIP----LFMMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~-~-~~~~~ilRp~~v~g~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~  232 (328)
                      ....| ..|...+.....++.+ + ++.+..++||.+-.+..-   ...++-+    .++...        ..-.++...
T Consensus       154 ~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~--------~~~~ll~~~  225 (253)
T KOG1204|consen  154 SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK--------ESGQLLDPQ  225 (253)
T ss_pred             HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH--------hcCCcCChh
Confidence            12356 6777777666555543 3 788999999988766321   0011111    111111        112367778


Q ss_pred             HHHHHHHHHhhCC
Q 020254          233 DIVNLIYEALSNP  245 (328)
Q Consensus       233 D~a~~~~~~~~~~  245 (328)
                      +.++.+..+++..
T Consensus       226 ~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  226 VTAKVLAKLLEKG  238 (253)
T ss_pred             hHHHHHHHHHHhc
Confidence            8888888888764

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.62  E-value=2.2e-07  Score=77.12  Aligned_cols=96  Identities=16%  Similarity=0.141  Sum_probs=71.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+|||+||||. |+.|++.|.+.||+|++.++..............  ....+..|.+++.+.++  ++|+||+++... 
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~--~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf-   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQAL--TVHTGALDPQELREFLKRHSIDILVDATHPF-   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCc--eEEECCCCHHHHHHHHHhcCCCEEEEcCCHH-
Confidence            68999999999 9999999999999999999998765554443210  12245567888888885  699999998641 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEE
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  140 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  140 (328)
                                     -...++++.++|++  .++..+-|
T Consensus        77 ---------------A~~is~~a~~a~~~--~~ipylR~   98 (256)
T TIGR00715        77 ---------------AAQITTNATAVCKE--LGIPYVRF   98 (256)
T ss_pred             ---------------HHHHHHHHHHHHHH--hCCcEEEE
Confidence                           12446788899999  56654433

This enzyme was found to be a monomer by gel filtration.

>PRK09620 hypothetical protein; Provisional

Probab=98.60  E-value=1.1e-07  Score=77.81  Aligned_cols=79  Identities=18%  Similarity=0.111  Sum_probs=50.1

Q ss_pred             CCCeEEEEcCC----------------chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHh
Q 020254           22 SQMTVSVTGAT----------------GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD   85 (328)
Q Consensus        22 ~~~~ilI~Gat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   85 (328)
                      ..|+||||+|.                ||+|++|++.|+++|++|+++++....................+....+.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~   81 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS   81 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence            35789999885                99999999999999999999987533211111100000000110111245666


Q ss_pred             hcC--CCcEEEECCCCC
Q 020254           86 CIQ--GSTAVVNLAGTP  100 (328)
Q Consensus        86 ~~~--~~d~vi~~a~~~  100 (328)
                      ++.  ++|+|||+||..
T Consensus        82 ~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         82 IITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HhcccCCCEEEECcccc
Confidence            664  699999999974

>cd00704 MDH Malate dehydrogenase

Probab=98.55  E-value=9.6e-07  Score=76.21  Aligned_cols=94  Identities=13%  Similarity=0.187  Sum_probs=71.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCC--CcccccCCCCCccccCceeecCC-----------hhhH
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEE-----------PQWR   84 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~-----------~~~~   84 (328)
                      ||.|+||+|.+|+.++..|...|       ++++.+++++  +.....          ..|+.|.           ....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~----------~~Dl~d~~~~~~~~~~i~~~~~   71 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV----------VMELQDCAFPLLKGVVITTDPE   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee----------eeehhhhcccccCCcEEecChH
Confidence            79999999999999999998765       2599999976  221111          1233222           3456


Q ss_pred             hhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           85 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        85 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      +.++++|+|||+||.+..   ......+.+..|..-.+.+...+.+.
T Consensus        72 ~~~~~aDiVVitAG~~~~---~g~tR~dll~~N~~i~~~i~~~i~~~  115 (323)
T cd00704          72 EAFKDVDVAILVGAFPRK---PGMERADLLRKNAKIFKEQGEALNKV  115 (323)
T ss_pred             HHhCCCCEEEEeCCCCCC---cCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence            888999999999997522   33467889999999999999999993

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.53  E-value=1.4e-06  Score=75.17  Aligned_cols=168  Identities=14%  Similarity=0.198  Sum_probs=106.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCc--ccccCCCCCccc---cCceeecCChhhHhhcCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKTRF---FPGVMIAEEPQWRDCIQGS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~   90 (328)
                      ++||.|+|++|.+|+.++..|+..|.       ++.++++....  ............   ...+.+.  ....+.++++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCC
Confidence            57999999999999999999998774       79999985432  221111111000   1112333  2335778899


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcc--cccCC--CCCCC
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE--VFDES--SPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~--~~~e~--~~~~~  165 (328)
                      |+||.+||.+..   ...+..+.+..|..-.+.+.+.+.+  ... ..++.+-|--+     .-..  .....  .|+..
T Consensus        80 DivvitaG~~~k---~g~tR~dll~~N~~i~~~i~~~i~~--~~~~~~iiivvsNPv-----D~~t~~~~k~sg~~p~~~  149 (322)
T cd01338          80 DWALLVGAKPRG---PGMERADLLKANGKIFTAQGKALND--VASRDVKVLVVGNPC-----NTNALIAMKNAPDIPPDN  149 (322)
T ss_pred             CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHh--hCCCCeEEEEecCcH-----HHHHHHHHHHcCCCChHh
Confidence            999999997522   3345778899999999999999998  442 34444433211     0000  01111  23333


Q ss_pred             ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc
Q 020254          166 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  202 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  202 (328)
                      .| ..+.-.+..+..++...+++...+|...|+|+++.
T Consensus       150 ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         150 FTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             eEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence            44 45555666666666667899999999999999753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.51  E-value=2.5e-07  Score=69.86  Aligned_cols=115  Identities=17%  Similarity=0.185  Sum_probs=77.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCcc-ccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      |||.|+|++|.+|++++..|...+  .+++.++++.............. .....+..-.....+.++++|+|+.++|.+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            689999999999999999999886  58999999865432221110000 011112221224457778999999999975


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .   .......+.+..|..-.+.+.+.+.+  .+...++.+-|
T Consensus        81 ~---~~g~sR~~ll~~N~~i~~~~~~~i~~--~~p~~~vivvt  118 (141)
T PF00056_consen   81 R---KPGMSRLDLLEANAKIVKEIAKKIAK--YAPDAIVIVVT  118 (141)
T ss_dssp             S---STTSSHHHHHHHHHHHHHHHHHHHHH--HSTTSEEEE-S
T ss_pred             c---cccccHHHHHHHhHhHHHHHHHHHHH--hCCccEEEEeC
Confidence            2   22345678889999999999999999  44444444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.41  E-value=3.6e-06  Score=72.70  Aligned_cols=106  Identities=14%  Similarity=0.136  Sum_probs=74.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCcccccCCCCCccccCceeecCCh-----------hhHhh
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-----------QWRDC   86 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~~   86 (328)
                      ||.|+|++|.+|+.++..|...+.       +++++++++......        ....|+.|..           ...+.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~--------g~~~Dl~d~~~~~~~~~~~~~~~~~~   72 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLE--------GVVMELMDCAFPLLDGVVPTHDPAVA   72 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccc--------eeEeehhcccchhcCceeccCChHHH
Confidence            589999999999999999987542       699999865531100        1112333222           34577


Q ss_pred             cCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEec
Q 020254           87 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSA  143 (328)
Q Consensus        87 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss  143 (328)
                      ++++|+||++||.+..   ...++.+.+..|+.-.+.+.+.+.+  .. ...++.+-|
T Consensus        73 ~~~aDiVVitAG~~~~---~~~tr~~ll~~N~~i~k~i~~~i~~--~~~~~~iiivvs  125 (324)
T TIGR01758        73 FTDVDVAILVGAFPRK---EGMERRDLLSKNVKIFKEQGRALDK--LAKKDCKVLVVG  125 (324)
T ss_pred             hCCCCEEEEcCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHh--hCCCCeEEEEeC
Confidence            8899999999997522   2334688899999999999999999  42 444444444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.34  E-value=5.1e-05  Score=60.39  Aligned_cols=217  Identities=12%  Similarity=0.057  Sum_probs=127.0

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..|++||+|-..  -|+..|++.|.++|.++......+.-   ..++.+.........+|+.+.+++++++.       +
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~   84 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGK   84 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCc
Confidence            468999999754  79999999999999988766555421   22222222222245689999888777663       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      .|.++|+.+....       .+.+.+......++-..+.-.++.+++..-++...++-+|=     +|...      .-|
T Consensus        85 lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY-----lgs~r------~vP  153 (259)
T COG0623          85 LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY-----LGSER------VVP  153 (259)
T ss_pred             ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe-----cccee------ecC
Confidence            8999999987532       12333444444455555555566666654344445554441     23111      112


Q ss_pred             CCCch-HHHHHHHHHHHHhcccC---CCeEEEEEeceEEcCC---CcchhhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKD---GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      -.+.. .+|...|....+++...   |+++..+-.|.|-.-.   ...+..++....  ..-|+.      .-+..+|++
T Consensus       154 nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e--~~aPl~------r~vt~eeVG  225 (259)
T COG0623         154 NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENE--ANAPLR------RNVTIEEVG  225 (259)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHH--hhCCcc------CCCCHHHhh
Confidence            22333 77887887777766543   6667666666554322   222333333221  222322      246688888


Q ss_pred             HHHHHHhhCCC---CCceEEecCCC
Q 020254          236 NLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      .....++..-.   .+++.++.+|-
T Consensus       226 ~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         226 NTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             hhHHHHhcchhcccccceEEEcCCc
Confidence            88888876533   44577777664

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.31  E-value=6.4e-07  Score=71.98  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=57.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++++|+||+|.+|+.+++.|.+.|++|++++|+..+...+.....   ......+|..+.+++.+.++++|+||++.+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~  106 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA  106 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence            45799999999999999999999999999999998755433221100   000222456677778888899999999876


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus       107 ~  107 (194)
T cd01078         107 A  107 (194)
T ss_pred             C
Confidence            4

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.31  E-value=9.3e-07  Score=76.11  Aligned_cols=72  Identities=26%  Similarity=0.376  Sum_probs=53.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC-C-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ...++|+||||+|+||+.++++|+++ | .+++++.|+..+...+...     +...++   .++.+++.++|+|||+++
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e-----l~~~~i---~~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE-----LGGGKI---LSLEEALPEADIVVWVAS  224 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH-----hccccH---HhHHHHHccCCEEEECCc
Confidence            34579999999999999999999864 5 6899999986655444322     111233   246688889999999998


Q ss_pred             CC
Q 020254           99 TP  100 (328)
Q Consensus        99 ~~  100 (328)
                      .+
T Consensus       225 ~~  226 (340)
T PRK14982        225 MP  226 (340)
T ss_pred             CC
Confidence            64

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.30  E-value=7.5e-06  Score=65.88  Aligned_cols=177  Identities=16%  Similarity=0.094  Sum_probs=107.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-----CeEEEEecCCCcccccCCC--------CCccccCceeecCChh------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELIFPG--------KKTRFFPGVMIAEEPQ------   82 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~d~~~~~~------   82 (328)
                      +.|-+||||+++.||-+|+.+|++..     .++.+.+|+.++....-..        .....+..+|+++-.+      
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            34569999999999999999999753     3677888887765433110        1111133466665443      


Q ss_pred             -hHhhcCCCcEEEECCCCCCCC------------------------------CCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           83 -WRDCIQGSTAVVNLAGTPIGT------------------------------RWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        83 -~~~~~~~~d~vi~~a~~~~~~------------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                       +.+-++..|.|+.+||.....                              ..+.+...++++.|+.|...++..+...
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence             344455789999999974210                              1123556788999999998888776653


Q ss_pred             --CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhcccC---CCeEEEEEeceEEcCC
Q 020254          132 --PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKD  200 (328)
Q Consensus       132 --~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~  200 (328)
                        .....++|++||...  -...-.-.--+......+| .+|............+.   |+.-.++.||......
T Consensus       162 l~~~~~~~lvwtSS~~a--~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~  234 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMA--RKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS  234 (341)
T ss_pred             hhcCCCCeEEEEeeccc--ccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence              123348999999764  2211110001112234456 56655555544433332   6777788888766553

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.30  E-value=1.1e-05  Score=69.54  Aligned_cols=114  Identities=18%  Similarity=0.235  Sum_probs=73.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCC--CcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR--SKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      |||.|+|+||.+|..++..|+..|+  +|++++|.+  .............   .....++.-..+. +.++++|+||-+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence            6899999999999999999999986  599999954  2211111110000   0011233222233 358899999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-cEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~Ss  143 (328)
                      +|.+..   ......+.+..|....+.+++.+.+.  ... .++.+++
T Consensus        80 ag~p~~---~~~~r~dl~~~n~~i~~~~~~~i~~~--~~~~~viv~~n  122 (309)
T cd05294          80 AGVPRK---EGMSRLDLAKKNAKIVKKYAKQIAEF--APDTKILVVTN  122 (309)
T ss_pred             cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence            997522   22345678889999999999998883  333 3444443

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.27  E-value=1.1e-06  Score=78.59  Aligned_cols=73  Identities=25%  Similarity=0.321  Sum_probs=55.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhCC-C-eEEEEecCCCcccccCCC--CCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADN-H-QVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |+|+|| |++|+.+++.|++++ + +|++.+|+..+.......  ........+|+.|.+++.++++++|+||||++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            799999 999999999999986 4 899999999886555432  111224568888999999999999999999985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.25  E-value=1.8e-05  Score=67.82  Aligned_cols=112  Identities=14%  Similarity=0.210  Sum_probs=77.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeec---CChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|++|.+|++++..|..++  .++.+++.+ .. .......... .....+.   ..+++.+.++++|+||.+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a-~g~alDL~~~-~~~~~i~~~~~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NT-PGVAADLSHI-NTPAKVTGYLGPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-cc-ceeehHhHhC-CCcceEEEecCCCchHHhcCCCCEEEEeCC
Confidence            689999999999999999998887  489999987 21 1111111100 0112232   22456688899999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+.   .......+.+..|..-.+.+++.+.+  .+...++.+-|
T Consensus        78 ~~~---k~g~tR~dll~~N~~i~~~i~~~i~~--~~p~a~vivvt  117 (310)
T cd01337          78 VPR---KPGMTRDDLFNINAGIVRDLATAVAK--ACPKALILIIS  117 (310)
T ss_pred             CCC---CCCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEcc
Confidence            752   23445788999999999999999998  44454544443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.23  E-value=3.3e-06  Score=69.26  Aligned_cols=69  Identities=19%  Similarity=0.350  Sum_probs=48.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~   96 (328)
                      .|.+=-.++|.||.++++.|+++|++|+++++.....    ...    ...+|+.+.+.+.+++       .++|++||+
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~----~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALK----PEP----HPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcc----ccc----CCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            3444445699999999999999999999987632111    100    1247888766655443       468999999


Q ss_pred             CCCC
Q 020254           97 AGTP  100 (328)
Q Consensus        97 a~~~  100 (328)
                      ||+.
T Consensus        88 Agv~   91 (227)
T TIGR02114        88 MAVS   91 (227)
T ss_pred             CEec
Confidence            9964

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.22  E-value=7.8e-07  Score=74.86  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=61.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHh----CCCeEEEEecCCCcccccCCCC--------CccccCceeecCChhhHhhcCCCcE
Q 020254           25 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFPGK--------KTRFFPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      -++|.|||||.|..+++++.+    .+..+-+.+|++.+..+.+...        .+.....+|..|++++.+..+++.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            589999999999999999998    6789999999988766554221        1111334788899999999999999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      |+||+|..
T Consensus        87 ivN~vGPy   94 (423)
T KOG2733|consen   87 IVNCVGPY   94 (423)
T ss_pred             EEeccccc
Confidence            99999964

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.22  E-value=3.3e-06  Score=74.86  Aligned_cols=72  Identities=13%  Similarity=0.197  Sum_probs=55.9

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHh
Q 020254           22 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD   85 (328)
Q Consensus        22 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   85 (328)
                      ..++|+||||                +|.+|.++++.|.++|++|++++++... . . ...    ...+|+.+.+++.+
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-~-~~~----~~~~dv~~~~~~~~  259 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-T-PAG----VKRIDVESAQEMLD  259 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-C-CCC----cEEEccCCHHHHHH
Confidence            4579999999                9999999999999999999999987631 1 1 110    23468888776665


Q ss_pred             hc----CCCcEEEECCCCC
Q 020254           86 CI----QGSTAVVNLAGTP  100 (328)
Q Consensus        86 ~~----~~~d~vi~~a~~~  100 (328)
                      .+    .++|++||+||+.
T Consensus       260 ~v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        260 AVLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHhcCCCCEEEEccccc
Confidence            55    4689999999974

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.20  E-value=9.1e-06  Score=71.70  Aligned_cols=101  Identities=16%  Similarity=0.162  Sum_probs=65.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      .++|||.|+||||++|+.|++.|.++ +++|+.++++.+....+.....  .....+..+.++++.. ++++|+||.+++
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~--~l~~~~~~~~~~~~~~~~~~~DvVf~Alp  113 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP--HLITQDLPNLVAVKDADFSDVDAVFCCLP  113 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc--cccCccccceecCCHHHhcCCCEEEEcCC
Confidence            56789999999999999999999988 5799999886554332211100  0112233333333322 578999999875


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      .                   .....++..+.+   + .++|-+|+..-
T Consensus       114 ~-------------------~~s~~i~~~~~~---g-~~VIDlSs~fR  138 (381)
T PLN02968        114 H-------------------GTTQEIIKALPK---D-LKIVDLSADFR  138 (381)
T ss_pred             H-------------------HHHHHHHHHHhC---C-CEEEEcCchhc
Confidence            3                   134466666533   3 57888888765

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.12  E-value=5.1e-05  Score=66.14  Aligned_cols=78  Identities=13%  Similarity=-0.004  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCchhHHH--HHHHHHhCCCeEEEEecCCCccc---------------ccC-CCCCccccCceeecCChhh
Q 020254           22 SQMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKAE---------------LIF-PGKKTRFFPGVMIAEEPQW   83 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~---------------~~~-~~~~~~~~~~~d~~~~~~~   83 (328)
                      -+|++||||+++.+|.+  +++.| +.|.+|+++++...+..               ... ..+.......+|+.+++.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            35799999999999999  89999 99999988885432111               111 1111112345799888777


Q ss_pred             Hhhc-------CCCcEEEECCCCC
Q 020254           84 RDCI-------QGSTAVVNLAGTP  100 (328)
Q Consensus        84 ~~~~-------~~~d~vi~~a~~~  100 (328)
                      .+++       .++|++||++|..
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC
Confidence            6555       3689999999976

>PRK05442 malate dehydrogenase; Provisional

Probab=98.12  E-value=3.2e-05  Score=66.85  Aligned_cols=106  Identities=20%  Similarity=0.244  Sum_probs=72.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCc--ccccCCCCCcc--cc-CceeecCChhhHhhcC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKTR--FF-PGVMIAEEPQWRDCIQ   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~--~~-~~~d~~~~~~~~~~~~   88 (328)
                      .+++||.|+|++|.+|+.++..|...+.       ++..+++++..  ...........  .+ ..+.+.  ....+.++
T Consensus         2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~   79 (326)
T PRK05442          2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFK   79 (326)
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhC
Confidence            4567999999999999999999987652       78899886532  11111111000  01 112232  23357778


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      ++|+||-+||.+   .....+..+.+..|..-.+.+.+.+.+.
T Consensus        80 daDiVVitaG~~---~k~g~tR~dll~~Na~i~~~i~~~i~~~  119 (326)
T PRK05442         80 DADVALLVGARP---RGPGMERKDLLEANGAIFTAQGKALNEV  119 (326)
T ss_pred             CCCEEEEeCCCC---CCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999974   2234567889999999999999999983

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.11  E-value=3.3e-05  Score=66.65  Aligned_cols=115  Identities=18%  Similarity=0.229  Sum_probs=77.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCc--ccccCCCCCcc---ccCceeecCChhhHhhcCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKTR---FFPGVMIAEEPQWRDCIQG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~   89 (328)
                      ++.||.|+|++|.+|++++..|+..|.       +++.+++++..  ...........   ......+.  ..-.+.+++
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~d   79 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEAFKD   79 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHHhCC
Confidence            457999999999999999999998773       79999886522  11111100000   01111222  233577789


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEec
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSA  143 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss  143 (328)
                      +|+||.+||.+   .....+..+.+..|..-.+.+.+.+.+  ... ..++.+-|
T Consensus        80 aDvVVitAG~~---~k~g~tR~dll~~Na~i~~~i~~~i~~--~~~~~~iiivvs  129 (323)
T TIGR01759        80 VDAALLVGAFP---RKPGMERADLLSKNGKIFKEQGKALNK--VAKKDVKVLVVG  129 (323)
T ss_pred             CCEEEEeCCCC---CCCCCcHHHHHHHHHHHHHHHHHHHHh--hCCCCeEEEEeC
Confidence            99999999975   223456788999999999999999999  443 44444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.08  E-value=3.8e-05  Score=66.61  Aligned_cols=70  Identities=23%  Similarity=0.303  Sum_probs=45.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|++|+|+||||++|+.|++.|.+++|   ++..+....+....+...     ...+++.+.+..+  ++++|+||.+++
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~-----~~~l~~~~~~~~~--~~~vD~vFla~p   75 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFA-----GKNLRVREVDSFD--FSQVQLAFFAAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccC-----CcceEEeeCChHH--hcCCCEEEEcCC
Confidence            457999999999999999999998765   444554443322222111     1234555444332  478999999875

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.05  E-value=7.4e-05  Score=64.17  Aligned_cols=111  Identities=18%  Similarity=0.235  Sum_probs=76.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeec---CChhhHhhcCCCcEEEECCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ||.|+|++|.+|++++..|...+.  ++.++++++.....+  ..... .....+.   +.+++.+.++++|+||.+||.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~--DL~~~-~~~~~i~~~~~~~~~~~~~~daDivvitaG~   77 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAA--DLSHI-PTAASVKGFSGEEGLENALKGADVVVIPAGV   77 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEc--hhhcC-CcCceEEEecCCCchHHHcCCCCEEEEeCCC
Confidence            689999999999999999988874  799999877221111  11100 1112333   123456788999999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +..   ......+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        78 ~~~---~g~~R~dll~~N~~I~~~i~~~i~~--~~p~~iiivvs  116 (312)
T TIGR01772        78 PRK---PGMTRDDLFNVNAGIVKDLVAAVAE--SCPKAMILVIT  116 (312)
T ss_pred             CCC---CCccHHHHHHHhHHHHHHHHHHHHH--hCCCeEEEEec
Confidence            522   3445678899999999999999998  44444544444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.03  E-value=5.4e-06  Score=69.36  Aligned_cols=79  Identities=15%  Similarity=0.199  Sum_probs=61.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      .+...++|.|||||.|.-++++|..+|.+-.+..|+..+...+....... ..-..+.+++.+++.+.+.++|+||+|..
T Consensus         4 e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~-~~~~p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           4 EREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE-AAVFPLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             CcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc-ccccCCCCHHHHHHHHhcceEEEeccccc
Confidence            34457999999999999999999999998888899988876554332211 22345556889999999999999999964

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.03  E-value=3.9e-05  Score=66.22  Aligned_cols=114  Identities=18%  Similarity=0.245  Sum_probs=77.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCcc--ccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR--FFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ..+||.|+|+ |.+|+.++..|+..|.  ++.+++++..............  ......+. .++. +.++++|+||.+|
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~~~~-~~~~~adivIita   81 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-AGDY-SDCKDADLVVITA   81 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-eCCH-HHhCCCCEEEEec
Confidence            3469999997 9999999999998886  8999999776533222111100  01123343 2333 4578999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      |.+..   ......+.+..|..-.+.+++.+.+  .+...++.+-|
T Consensus        82 g~~~k---~g~~R~dll~~N~~i~~~i~~~i~~--~~~~~~vivvs  122 (315)
T PRK00066         82 GAPQK---PGETRLDLVEKNLKIFKSIVGEVMA--SGFDGIFLVAS  122 (315)
T ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEcc
Confidence            97522   2345678889999999999999988  45444544443

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.01  E-value=5.1e-05  Score=55.84  Aligned_cols=72  Identities=18%  Similarity=0.255  Sum_probs=41.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCC-cccccCCCCC-ccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS-KAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||.|+||||++|+.|++.|.+.. +++..+..+.. ....+..... ......+.+.+  .-.+.+.++|+||.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCc
Confidence            69999999999999999999964 45555444433 3222211100 00011223323  22234488999999975

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.99  E-value=3.6e-05  Score=67.14  Aligned_cols=70  Identities=24%  Similarity=0.313  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ||+|+|.||||++|+.|++.|.+++|   ++.++.+..+....+.-.     ...+.+.|.+.  ..+.++|+||.+++.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~-----g~~i~v~d~~~--~~~~~vDvVf~A~g~   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFK-----GKELKVEDLTT--FDFSGVDIALFSAGG   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeC-----CceeEEeeCCH--HHHcCCCEEEECCCh
Confidence            47999999999999999999999876   557887775544333211     11122223322  234689999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.98  E-value=5.5e-06  Score=62.22  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=59.2

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ....++++|+|+ |..|+.++..|.+.|.+ |+++.|+..+...+.....   ...+...+.+++.+.+.++|+||++.+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~~~~~~~~~~~~~DivI~aT~   84 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAIPLEDLEEALQEADIVINATP   84 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEEEGGGHCHHHHTESEEEE-SS
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---ccccceeeHHHHHHHHhhCCeEEEecC
Confidence            345689999995 99999999999999965 9999999877665543211   223566677788888899999999987


Q ss_pred             CC
Q 020254           99 TP  100 (328)
Q Consensus        99 ~~  100 (328)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            64

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.97  E-value=7.8e-05  Score=64.34  Aligned_cols=112  Identities=21%  Similarity=0.276  Sum_probs=76.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccc---cCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||.|+|+ |.+|+.++..|+..|  ++|++++|++..............   .....+. .... +.+.++|+||+++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~~~~-~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-AGDY-SDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-cCCH-HHhCCCCEEEEccC
Confidence            47999995 999999999999998  689999998776543332211000   0111222 1222 34689999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ...+..+.+..|..-.+.+.+.+++  .+...++.+-|
T Consensus        78 ~~~~---~g~~R~dll~~N~~i~~~~~~~i~~--~~~~~~vivvs  117 (306)
T cd05291          78 APQK---PGETRLDLLEKNAKIMKSIVPKIKA--SGFDGIFLVAS  117 (306)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEec
Confidence            7522   2345678889999999999999999  44444444443

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.94  E-value=3.5e-05  Score=56.90  Aligned_cols=73  Identities=14%  Similarity=0.187  Sum_probs=44.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh-CCCeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|.|++|..|+.+++.+.+ .++++.+. +|+++..... ............+.-.++++++++.+|++|++.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~-d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGK-DVGELAGIGPLGVPVTDDLEELLEEADVVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTS-BCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccc-hhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence            6899999999999999999998 67886655 4544221110 000000001122223467888888899999995

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.92  E-value=8.3e-05  Score=65.10  Aligned_cols=75  Identities=16%  Similarity=0.211  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||+|+|+||||++|+.+++.|.+. ++++.++.++............ .......++.+.+..  ...++|+||.|..
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP   77 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALP   77 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCC
Confidence            4589999999999999999999986 5788777764333222211100 000111233344332  4467999999875

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.90  E-value=0.00022  Score=60.61  Aligned_cols=113  Identities=23%  Similarity=0.294  Sum_probs=77.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.+|+.++-.|+.++  .+++++++...............   .....++....+ .+.++++|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            58999999 999999999998775  48999999844433222111100   011123333222 567789999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+   +.......+.++.|..-.+.+.+.+.+  .....++.+-|
T Consensus        79 ~p---rKpGmtR~DLl~~Na~I~~~i~~~i~~--~~~d~ivlVvt  118 (313)
T COG0039          79 VP---RKPGMTRLDLLEKNAKIVKDIAKAIAK--YAPDAIVLVVT  118 (313)
T ss_pred             CC---CCCCCCHHHHHHhhHHHHHHHHHHHHh--hCCCeEEEEec
Confidence            75   333456788999999999999999998  45455555555

>PLN02602 lactate dehydrogenase

Probab=97.89  E-value=0.00014  Score=63.56  Aligned_cols=113  Identities=16%  Similarity=0.251  Sum_probs=75.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCcc--ccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR--FFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +||.|+|+ |.+|+.++..|+..+.  ++.+++.++.............  ......+....+. +.++++|+||-+||.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy-~~~~daDiVVitAG~  115 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY-AVTAGSDLCIVTAGA  115 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH-HHhCCCCEEEECCCC
Confidence            69999995 9999999999998773  7999998765432221111100  0111344322233 347899999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +..   ......+.+..|..-.+.+++.+.+  ...+.++.+-|
T Consensus       116 ~~k---~g~tR~dll~~N~~I~~~i~~~I~~--~~p~~ivivvt  154 (350)
T PLN02602        116 RQI---PGESRLNLLQRNVALFRKIIPELAK--YSPDTILLIVS  154 (350)
T ss_pred             CCC---cCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEec
Confidence            522   2345678889999999999999998  44444444433

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.88  E-value=0.00017  Score=62.45  Aligned_cols=103  Identities=18%  Similarity=0.196  Sum_probs=69.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||||.|+|+ |.+|..++..|...|. +|+++++++.........   ..........+....++ +.++++|+||.+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            579999997 9999999999998875 999999977643221110   00000111223222334 45789999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      .+...   .....+....|+...+.+++.+.+
T Consensus        80 ~p~~~---~~~r~~~~~~n~~i~~~i~~~i~~  108 (307)
T PRK06223         80 VPRKP---GMSRDDLLGINAKIMKDVAEGIKK  108 (307)
T ss_pred             CCCCc---CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            75322   234556677888888999998888

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.84  E-value=4.6e-05  Score=67.42  Aligned_cols=102  Identities=11%  Similarity=0.126  Sum_probs=69.6

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhh-H
Q 020254           22 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-R   84 (328)
Q Consensus        22 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~   84 (328)
                      ..++|+||||                ||.+|.++++.|..+|++|+++.++.....   +..    ...+|+.+.+++ +
T Consensus       184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~---~~~----~~~~~v~~~~~~~~  256 (390)
T TIGR00521       184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT---PPG----VKSIKVSTAEEMLE  256 (390)
T ss_pred             CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC---CCC----cEEEEeccHHHHHH
Confidence            4579999998                468999999999999999999887654321   111    234788887777 4


Q ss_pred             hhc----CCCcEEEECCCCCCCCCCCh-----hHHHHHHHhhhhhHHHHHHHHhc
Q 020254           85 DCI----QGSTAVVNLAGTPIGTRWSS-----EIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        85 ~~~----~~~d~vi~~a~~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      ..+    .++|++|++||+........     ......+..|+.-+..+++.+++
T Consensus       257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            333    46899999999753321110     00012234677778888888887

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.82  E-value=0.0002  Score=58.63  Aligned_cols=116  Identities=18%  Similarity=0.215  Sum_probs=74.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCccc-ccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+-||.|+||.|.||+.|.-.|..+.  -+....+....+.- .-+.+... ...-..+.-.+.++++++++|+|+--||
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T-~s~V~g~~g~~~L~~al~~advVvIPAG  105 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINT-NSSVVGFTGADGLENALKGADVVVIPAG  105 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCC-CCceeccCChhHHHHHhcCCCEEEecCC
Confidence            35689999999999999997776543  13344443322111 00111000 0111234456799999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+   +......++.+++|-.-.+.+.+++.+.  -.+.++.+-|
T Consensus       106 VP---RKPGMTRDDLFn~NAgIv~~l~~aia~~--cP~A~i~vIs  145 (345)
T KOG1494|consen  106 VP---RKPGMTRDDLFNINAGIVKTLAAAIAKC--CPNALILVIS  145 (345)
T ss_pred             CC---CCCCCcHHHhhhcchHHHHHHHHHHHhh--CccceeEeec
Confidence            86   3334456789999999999999999883  3333444444

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.80  E-value=0.00013  Score=61.50  Aligned_cols=113  Identities=12%  Similarity=0.149  Sum_probs=77.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhCC----CeEEEEecCCCcccccCCCCCccc-c-CceeecCChhhHhhcCCCcEEEECCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRF-F-PGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |.|+||+|.+|..++..|+..|    .+|+++++++.............. . ....+.-.++..+.++++|+||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999888    799999998755332221110000 1 123444445667888999999999987


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ...   ......+....|+...+.+++.+++  .....++.+-|
T Consensus        81 ~~~---~g~~r~~~~~~n~~i~~~i~~~i~~--~~p~a~~i~~t  119 (263)
T cd00650          81 GRK---PGMGRLDLLKRNVPIVKEIGDNIEK--YSPDAWIIVVS  119 (263)
T ss_pred             CCC---cCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEec
Confidence            522   2334567778899999999999998  34444444433

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.80  E-value=0.00011  Score=63.59  Aligned_cols=73  Identities=18%  Similarity=0.230  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-----------CCCC------ccccCceeecCChhhHh
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKK------TRFFPGVMIAEEPQWRD   85 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~------~~~~~~~d~~~~~~~~~   85 (328)
                      +|+|.|+| +|.+|..++..|++.|++|++++|++.......           ....      .....+++.  ..++.+
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~--~~~~~~   78 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV--TDSLAD   78 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE--ECcHHH
Confidence            36899999 899999999999999999999999875433211           1100      000001122  235667


Q ss_pred             hcCCCcEEEECCC
Q 020254           86 CIQGSTAVVNLAG   98 (328)
Q Consensus        86 ~~~~~d~vi~~a~   98 (328)
                      +++++|+|+.+..
T Consensus        79 a~~~ad~Vi~avp   91 (308)
T PRK06129         79 AVADADYVQESAP   91 (308)
T ss_pred             hhCCCCEEEECCc
Confidence            7789999999864

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.75  E-value=0.00036  Score=58.53  Aligned_cols=67  Identities=18%  Similarity=0.305  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEe-cCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||+|.|+|++|.+|+.+++.+.+. +.++.++. +++...... .        ..++...++++++++++|+|++++.
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~--------~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-G--------ALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-C--------CCCccccCCHHHhccCCCEEEECCC
Confidence            479999999999999999998864 67877754 444332221 1        1234445667777778999999874

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.74  E-value=0.00028  Score=60.79  Aligned_cols=114  Identities=14%  Similarity=0.186  Sum_probs=75.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCcc-ccC-ceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTR-FFP-GVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~-~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+||.|+|+ |.+|+.++..|+..|  -++.+++++.............. .+. ...+....+.+ .++++|+||.+||
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG   80 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAG   80 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCC
Confidence            469999995 999999999998876  47999998775432221110000 011 11333223444 4789999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ....   ......+.+..|..-.+.+.+.+.+  ...+.++.+-|
T Consensus        81 ~~~k---~g~~R~dll~~N~~i~~~~~~~i~~--~~p~~~vivvs  120 (312)
T cd05293          81 ARQN---EGESRLDLVQRNVDIFKGIIPKLVK--YSPNAILLVVS  120 (312)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEcc
Confidence            7522   2345678889999999999999999  44444444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.73  E-value=0.00011  Score=60.21  Aligned_cols=75  Identities=21%  Similarity=0.376  Sum_probs=58.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~~   99 (328)
                      |+++|.| .|.+|..+++.|.+.||+|+++++++....+.............|-+|++.++++ +.++|+++-+.+.
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            6899999 5999999999999999999999999987665333111111334677788888887 6799999998764

>PF08338 DUF1731: Domain of unknown function (DUF1731); InterPro: IPR013549 This domain of unknown function appears towards the C terminus of proteins of the NAD dependent epimerase/dehydratase family (IPR001509 from INTERPRO) in bacteria, eukaryotes and archaea

Probab=97.73  E-value=1.9e-05  Score=47.03  Aligned_cols=48  Identities=46%  Similarity=0.780  Sum_probs=25.1

Q ss_pred             CcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          280 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       280 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      +|.+.++...|++......++++.++|+.+.||+++|+++++++++++
T Consensus         1 vP~~~lkl~lGe~a~lll~~q~v~P~kL~~~GF~F~~p~l~~AL~~ll   48 (48)
T PF08338_consen    1 VPAFALKLLLGEMAELLLASQRVSPKKLLEAGFQFRYPTLEEALRDLL   48 (48)
T ss_dssp             -------------GGGGG-EEEE--HHHHHTT---S-SSHHHHHHH--
T ss_pred             CCHHHHHHHHHHHHHHHhCCCeecChHHHHCCCcccCCCHHHHHhccC
Confidence            377888888899999999999999999999999999999999999875

Many of the proteins in which it is found are involved in cell-division inhibition. ; PDB: 3OH8_A.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.69  E-value=0.00032  Score=61.71  Aligned_cols=38  Identities=34%  Similarity=0.566  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   59 (328)
                      ||++|+|+||||++|+.|++.|.+.. .+++++.++.+.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            35799999999999999999999875 488888565543

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.68  E-value=0.00025  Score=62.14  Aligned_cols=98  Identities=15%  Similarity=0.208  Sum_probs=57.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+||||++|+.+++.|.+. ++++..+ +++.+......   ....  .....++.+. +.+++++++|+||.|..
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~--~~~~~~~~~~-~~~~~~~~~DvVf~alP   77 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLR--GLVDLNLEPI-DEEEIAEDADVVFLALP   77 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCcccc--ccCCceeecC-CHHHhhcCCCEEEECCC
Confidence            58999999999999999999986 4688754 54432222111   1100  0111223222 33444468999999975


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      ..                   ....++..+.+  .+ .++|=+|+..-
T Consensus        78 ~~-------------------~s~~~~~~~~~--~G-~~VIDlS~~fR  103 (346)
T TIGR01850        78 HG-------------------VSAELAPELLA--AG-VKVIDLSADFR  103 (346)
T ss_pred             ch-------------------HHHHHHHHHHh--CC-CEEEeCChhhh
Confidence            31                   23455666655  33 56777777543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.68  E-value=0.00034  Score=60.36  Aligned_cols=110  Identities=22%  Similarity=0.330  Sum_probs=74.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccc----cCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|.|+ |.+|..++..|+..|  .+|.+++++......    +.....  ......+. ..+. +.++++|+||.++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--~~~~~~i~-~~d~-~~l~~aDiViita   75 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--FVKPVRIY-AGDY-ADCKGADVVVITA   75 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--ccCCeEEe-eCCH-HHhCCCCEEEEcc
Confidence            58999996 999999999999998  689999998764432    111100  01111222 1233 4578999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +....   ......+....|....+.+++.+.+  .+.+.++.+-|
T Consensus        76 ~~~~~---~~~~r~dl~~~n~~i~~~~~~~l~~--~~~~giiiv~t  116 (308)
T cd05292          76 GANQK---PGETRLDLLKRNVAIFKEIIPQILK--YAPDAILLVVT  116 (308)
T ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEec
Confidence            87422   2334567788999999999999888  34444444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.66  E-value=0.0007  Score=58.28  Aligned_cols=103  Identities=19%  Similarity=0.182  Sum_probs=68.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |||.|.|+ |++|..++..|+..|+ +|+++++..........   ...........+.-..++++ ++++|+||-+++.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            68999995 9999999999999886 89999986553221110   00000001112322234444 6889999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      +..   ......+....|....+.+++.+.+.
T Consensus        80 p~~---~~~sR~~l~~~N~~iv~~i~~~I~~~  108 (305)
T TIGR01763        80 PRK---PGMSREDLLSMNAGIVREVTGRIMEH  108 (305)
T ss_pred             CCC---cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            522   22345678889999999999998883

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.66  E-value=5e-05  Score=64.86  Aligned_cols=77  Identities=14%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCC---CcccccCCCC----CccccCceeecCChhhHhhcCCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSR---SKAELIFPGK----KTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      +.++++|+|| |.+|++++..|.+.|.+ |++++|+.   .+...+....    .......+|+.+.+++.+.++.+|+|
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            3568999998 89999999999999985 99999986   3332221110    00002235666666777778889999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            999765

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.66  E-value=0.00064  Score=58.92  Aligned_cols=113  Identities=16%  Similarity=0.151  Sum_probs=74.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+||.|+|| |.+|+.++..|...| .+|+++++++.......   ............+....+++ .++++|+||.+++
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVitag   82 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITAG   82 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECCC
Confidence            469999996 999999999998888 68999999875432111   00000001112333334555 7799999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCc-EEEEe
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP-SVLVS  142 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~v~~S  142 (328)
                      .+..   ......+....|..-.+.+++.+.+  ...+. ++.+|
T Consensus        83 ~~~~---~g~~r~dll~~n~~i~~~i~~~i~~--~~p~a~vivvs  122 (319)
T PTZ00117         83 VQRK---EEMTREDLLTINGKIMKSVAESVKK--YCPNAFVICVT  122 (319)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEec
Confidence            6522   2233567778898888899998888  34444 44443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.66  E-value=5.1e-05  Score=59.06  Aligned_cols=66  Identities=20%  Similarity=0.261  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||+|.++| .|-.|+.+++.|++.||+|++.+|++.+...+....       +..  .++..++++++|+|+-+..
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~~--~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AEV--ADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EEE--ESSHHHHHHHBSEEEE-SS
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hhh--hhhhhhHhhcccceEeecc
Confidence            68999999 699999999999999999999999987766554321       222  3356677777899999864

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.64  E-value=0.00085  Score=58.14  Aligned_cols=108  Identities=14%  Similarity=0.123  Sum_probs=70.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      -.++||.|+| +|.+|+.++..++..|. +|+++++++........   ...........+.-..++ +.++++|+||.+
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t   81 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT   81 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence            3457999999 59999999999998885 89999998874321100   000000011233322334 467899999999


Q ss_pred             CCCCCCCCCC---hhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           97 AGTPIGTRWS---SEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        97 a~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      ++.... ...   +-...+....|....+.+++.+.+.
T Consensus        82 ag~~~~-~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~  118 (321)
T PTZ00082         82 AGLTKR-PGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY  118 (321)
T ss_pred             CCCCCC-CCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            987532 111   0034667778888889999988883

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.61  E-value=0.00018  Score=56.81  Aligned_cols=69  Identities=10%  Similarity=0.184  Sum_probs=40.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH----hhcCCCcEEEECCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR----DCIQGSTAVVNLAGTP  100 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~d~vi~~a~~~  100 (328)
                      |.+=--.||..|.+|++.+..+|++|+.+..+..-..   +..    ...+++.+.+++.    +.+++.|++|++|++.
T Consensus        21 R~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---p~~----~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   21 RFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP---PPG----VKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TT----EEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             eEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc---ccc----ceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            3333345899999999999999999999988743111   110    2235555555444    4445789999999975

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.59  E-value=0.00039  Score=62.30  Aligned_cols=103  Identities=17%  Similarity=0.182  Sum_probs=73.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-------CC--eEEEEecCCCcccccCCCCCccc---cCceeecCChhhHhhcCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD-------NH--QVRVLTRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~   90 (328)
                      +-||.|+|++|.+|.+++..|+..       +.  ++..++++...............   ...+.+.. + -.+.++++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~-~ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-D-PYEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-C-CHHHhCcC
Confidence            569999999999999999999987       54  78888888776443322111000   11122222 1 24677899


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      |+||.+||.+.   .......+.++.|..-.+.+.+.+.+
T Consensus       178 DiVVitAG~pr---kpG~tR~dLl~~N~~I~k~i~~~I~~  214 (444)
T PLN00112        178 EWALLIGAKPR---GPGMERADLLDINGQIFAEQGKALNE  214 (444)
T ss_pred             CEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999752   23446788999999999999999988

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.58  E-value=0.00022  Score=70.22  Aligned_cols=77  Identities=16%  Similarity=0.125  Sum_probs=57.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-Ce-------------EEEEecCCCcccccCCCCCccccCceeecCChhhHhhc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQ-------------VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   87 (328)
                      .|++|+|+|+ |++|+.+++.|.+.+ .+             |++.+++......+...........+|+.|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4679999995 999999999998753 33             88888877665544322110113467888999999999


Q ss_pred             CCCcEEEECCCC
Q 020254           88 QGSTAVVNLAGT   99 (328)
Q Consensus        88 ~~~d~vi~~a~~   99 (328)
                      +++|+||++...
T Consensus       647 ~~~DaVIsalP~  658 (1042)
T PLN02819        647 SQVDVVISLLPA  658 (1042)
T ss_pred             cCCCEEEECCCc
Confidence            999999999864

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.58  E-value=0.0001  Score=58.40  Aligned_cols=69  Identities=25%  Similarity=0.200  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||++.|.| +|.||..|++.|.+.||+|++-+|+.++.........   ...   ....+.+++.+.+|+||...-
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l---~~~---i~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL---GPL---ITGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh---ccc---cccCChHHHHhcCCEEEEecc
Confidence            46666666 8999999999999999999998777665433322110   111   244456777788999998853

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.54  E-value=0.00024  Score=63.60  Aligned_cols=117  Identities=14%  Similarity=0.148  Sum_probs=75.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC---C----CeEEEEecC--CCcccccCCCCCcc--c-cCceeecCChhhHhhcCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD---N----HQVRVLTRS--RSKAELIFPGKKTR--F-FPGVMIAEEPQWRDCIQG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~---g----~~V~~~~r~--~~~~~~~~~~~~~~--~-~~~~d~~~~~~~~~~~~~   89 (328)
                      .+.+|+||||+|.||.+|+-.+.+-   |    ..+++++..  ..............  . ...+.+++  .-.+.+++
T Consensus       122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~--~~~ea~~d  199 (452)
T cd05295         122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT--DLDVAFKD  199 (452)
T ss_pred             CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE--CCHHHhCC
Confidence            3568999999999999999999872   3    246666663  22211111000000  0 11234432  23578889


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +|+||-++|.+.   .......+....|..-.+.+.+++.+.+....+++.+.|
T Consensus       200 aDvvIitag~pr---k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         200 AHVIVLLDDFLI---KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CCEEEECCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            999999999752   234457889999999999999999984222256666664

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.54  E-value=0.00031  Score=63.56  Aligned_cols=67  Identities=22%  Similarity=0.278  Sum_probs=48.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|+|+||+|.+|+.+++.|.+.|++|++++|++..........      ++..  ..+..+.+.++|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~------gv~~--~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL------GVEY--ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc------CCee--ccCHHHHhccCCEEEEecC
Confidence            58999999999999999999999999999999875432221110      1221  2234566778999999864

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.51  E-value=0.0012  Score=57.72  Aligned_cols=71  Identities=20%  Similarity=0.312  Sum_probs=43.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++|.|.||||++|+.|++.|.+++|   ++..+....+........     ...+.+.+.+  .+.+.++|+||.+++
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~-----~~~~~v~~~~--~~~~~~~D~vf~a~p   78 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE-----GRDYTVEELT--EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec-----CceeEEEeCC--HHHHcCCCEEEECCC
Confidence            457999999999999999999999776   444444333222221111     1111222221  133478999999886


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus        79 ~   79 (344)
T PLN02383         79 G   79 (344)
T ss_pred             c
Confidence            4

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.48  E-value=0.00039  Score=63.66  Aligned_cols=75  Identities=19%  Similarity=0.146  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      +.++|+|+|+++ +|..+++.|++.|++|++.++.... .........   ..++++...+...+...++|+||++++..
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPEEFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence            357899999877 9999999999999999999997532 111000000   00123322222224456799999999863

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.47  E-value=0.00071  Score=61.04  Aligned_cols=76  Identities=24%  Similarity=0.426  Sum_probs=52.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCChhhHhhcCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~   92 (328)
                      |+|.|+| .|++|..++..|.+.||+|+++++++.+...+...........           ..+.-..+..++++++|+
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            5899999 7999999999999999999999998876554432110000000           002222345566788999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      ||-+...+
T Consensus        80 vii~vpt~   87 (411)
T TIGR03026        80 IIICVPTP   87 (411)
T ss_pred             EEEEeCCC
Confidence            99998753

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.47  E-value=0.00051  Score=60.52  Aligned_cols=105  Identities=15%  Similarity=0.197  Sum_probs=69.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-e------EEEE--ecCCCcccccCCCCCccc---cCceeecCChhhHhhcCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-Q------VRVL--TRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~------V~~~--~r~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~   89 (328)
                      ++-||.|+|++|.+|.+++..|...+. .      ++.+  +++.+.............   ...+.+.. + -.+.+++
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~-~y~~~kd  120 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-D-PYEVFED  120 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-C-CHHHhCC
Confidence            467999999999999999999998763 2      3333  555544322211111000   11122222 2 2467789


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      +|+||.+||.+.   .......+.+..|..-.+.+...+.+.
T Consensus       121 aDIVVitAG~pr---kpg~tR~dll~~N~~I~k~i~~~I~~~  159 (387)
T TIGR01757       121 ADWALLIGAKPR---GPGMERADLLDINGQIFADQGKALNAV  159 (387)
T ss_pred             CCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999752   234467889999999999999999984

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.47  E-value=5.4e-05  Score=60.01  Aligned_cols=76  Identities=24%  Similarity=0.359  Sum_probs=44.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccC-----------ceeecCChhhHhhcCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-----------GVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~d~   92 (328)
                      |||.|.| .||+|..++..|.+.||+|++++.++.....+........-.           ...+.-..++..++.++|+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            7999998 899999999999999999999999987654443221100000           0122223455666778999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      +|-|...+
T Consensus        80 ~~I~VpTP   87 (185)
T PF03721_consen   80 VFICVPTP   87 (185)
T ss_dssp             EEE----E
T ss_pred             EEEecCCC
Confidence            99998754

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.46  E-value=0.00076  Score=60.74  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=35.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   63 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   63 (328)
                      +|+|.|+| .|++|..++..|.+.||+|+++++++.+...+
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            47999999 79999999999999999999999988776654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.43  E-value=0.0013  Score=56.49  Aligned_cols=113  Identities=13%  Similarity=0.172  Sum_probs=74.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCc-ccc---CceeecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT-RFF---PGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~---~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||.|.|+ |.+|+.++..|+..+.  ++.+++............... ..+   ..+.+.. .+ .+.++++|+||-+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~-~~-y~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA-GD-YDDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE-CC-HHHhCCCCEEEECCC
Confidence            5899997 9999999999998874  799999876543222111110 001   1233332 22 467789999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+.. +.......+.+..|..-.+.+.+.+.+  .+...++.+-|
T Consensus        78 ~~~k-pg~tr~R~dll~~N~~I~~~i~~~i~~--~~p~~i~ivvs  119 (307)
T cd05290          78 PSID-PGNTDDRLDLAQTNAKIIREIMGNITK--VTKEAVIILIT  119 (307)
T ss_pred             CCCC-CCCCchHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEec
Confidence            7522 111111578889999999999999999  45555555544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.39  E-value=0.0015  Score=56.27  Aligned_cols=111  Identities=17%  Similarity=0.181  Sum_probs=73.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCcccc--CceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      |.|+|+ |.+|..++..|+..|  .++++++++................  ....+....+ .+.++++|+||.++|.+.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence            568895 899999999999888  6899999987654333221110001  1112221222 357889999999999752


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .   ...+..+....|+.-.+.+++.+++  ...+.++.+-|
T Consensus        79 ~---~~~~R~~l~~~n~~i~~~~~~~i~~--~~p~~~viv~s  115 (300)
T cd00300          79 K---PGETRLDLINRNAPILRSVITNLKK--YGPDAIILVVS  115 (300)
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEcc
Confidence            2   2345678888999999999999998  44444444443

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.38  E-value=0.002  Score=52.88  Aligned_cols=37  Identities=30%  Similarity=0.495  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEE-EEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVR-VLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~-~~~r~~~   58 (328)
                      +||||.|.|++|..|+.+++.+.+.+ .++. +++|.++
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            46899999999999999999999875 5544 4456554

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.37  E-value=0.00038  Score=60.79  Aligned_cols=68  Identities=22%  Similarity=0.334  Sum_probs=43.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeE---EEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQV---RVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +|+|+||||++|+.|++.|.+++|.+   ..+.+..+....+...     .....+.+.+  ...+.++|+||.+++.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~-----~~~~~~~~~~--~~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK-----GKELEVNEAK--IESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC-----CeeEEEEeCC--hHHhcCCCEEEECCCH
Confidence            58999999999999999999987754   3444654443333211     1112222322  2334789999999874

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.29  E-value=0.0014  Score=56.97  Aligned_cols=78  Identities=26%  Similarity=0.417  Sum_probs=56.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCce-----------eecCChhhHhhcCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d~   92 (328)
                      |||.|.| +||+|-..+.-|.+.||+|++++..+++...+........-+++           .+.-..+.+++++..|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            7899999 89999999999999999999999998876555432211100011           12223456778889999


Q ss_pred             EEECCCCCCC
Q 020254           93 VVNLAGTPIG  102 (328)
Q Consensus        93 vi~~a~~~~~  102 (328)
                      +|-+.|-+..
T Consensus        80 ~fIavgTP~~   89 (414)
T COG1004          80 VFIAVGTPPD   89 (414)
T ss_pred             EEEEcCCCCC
Confidence            9999886533

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.28  E-value=0.0013  Score=57.44  Aligned_cols=75  Identities=19%  Similarity=0.306  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc-cCc----eeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPG----VMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~----~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ||+|.|+| .|.+|..++..|.+.|++|++++|++.............. ...    ....-..+.++.++++|+||-+.
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV   79 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence            47999999 5999999999999999999999998655433322110000 000    01112234556677899999986


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        80 ~   80 (325)
T PRK00094         80 P   80 (325)
T ss_pred             C
Confidence            4

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.28  E-value=0.0015  Score=56.40  Aligned_cols=74  Identities=15%  Similarity=0.133  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----------CCC--ccccCceeecCChhhHhhcC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKK--TRFFPGVMIAEEPQWRDCIQ   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~--~~~~~~~d~~~~~~~~~~~~   88 (328)
                      ..++|.|+| +|.+|+.++..|+..|++|+++++++........           ...  .....++.+  ..+++++++
T Consensus         6 ~i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~--~~~l~~av~   82 (321)
T PRK07066          6 DIKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF--VATIEACVA   82 (321)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee--cCCHHHHhc
Confidence            346899999 5999999999999999999999998764322111           000  000011122  235778889


Q ss_pred             CCcEEEECCC
Q 020254           89 GSTAVVNLAG   98 (328)
Q Consensus        89 ~~d~vi~~a~   98 (328)
                      ++|.|+-++.
T Consensus        83 ~aDlViEavp   92 (321)
T PRK07066         83 DADFIQESAP   92 (321)
T ss_pred             CCCEEEECCc
Confidence            9999999964

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.28  E-value=0.00071  Score=57.69  Aligned_cols=75  Identities=12%  Similarity=0.178  Sum_probs=44.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCC-CCccccCceeec--CChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIA--EEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~--~~~~~~~~~~~~d~vi~~a   97 (328)
                      +|+||.|.||+|+.|..|++.|..+. .++...+.+......+... ..........+.  |.+.+  ..+++|+||.+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal   78 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL   78 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence            46899999999999999999999876 4666665554322222111 100001111222  22222  345799999986


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        79 P   79 (349)
T COG0002          79 P   79 (349)
T ss_pred             C
Confidence            4

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.28  E-value=0.003  Score=54.69  Aligned_cols=54  Identities=22%  Similarity=0.367  Sum_probs=43.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..|+|.|+| +|.+|+++++.|.+.||+|++.+|+..                      +++.++++++|+|+.+..
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp   56 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG----------------------LSLAAVLADADVIVSAVS   56 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC
Confidence            457999998 799999999999999999999998753                      124455667888887753

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.26  E-value=0.0011  Score=57.00  Aligned_cols=68  Identities=15%  Similarity=0.244  Sum_probs=50.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+| .|.+|..+++.|.+.||+|++.+|++.+...+.....      ....+.+++.+.+.++|+|+.+..
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~------~~~~s~~~~~~~~~~~dvIi~~vp   68 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRT------TGVANLRELSQRLSAPRVVWVMVP   68 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC------cccCCHHHHHhhcCCCCEEEEEcC
Confidence            5899999 6999999999999999999999999876555443211      112244455555667899988854

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.25  E-value=0.0013  Score=56.98  Aligned_cols=70  Identities=20%  Similarity=0.255  Sum_probs=43.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++|.|+||||++|+.|++.|.++.   .++..+....+....+.-.     ...+.+.+.+.  ..+.++|+||.+++
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~-----~~~~~v~~~~~--~~~~~~Dvvf~a~p   75 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFG-----GKSVTVQDAAE--FDWSQAQLAFFVAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEEC-----CcceEEEeCch--hhccCCCEEEECCC
Confidence            45799999999999999999999853   3677775554333322211     10122222222  12257899998875

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.25  E-value=0.00061  Score=58.05  Aligned_cols=68  Identities=21%  Similarity=0.156  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .++|+|+|. |.+|+.+++.|...|.+|++.+|++.+.......       .....+.+++.+.++++|+||++..
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEM-------GLIPFPLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------CCeeecHHHHHHHhccCCEEEECCC
Confidence            579999995 9999999999999999999999987543322111       1233345567788889999999864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.24  E-value=0.0028  Score=55.36  Aligned_cols=106  Identities=15%  Similarity=0.177  Sum_probs=65.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC--------------------c--cccCceee
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK--------------------T--RFFPGVMI   77 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~--------------------~--~~~~~~d~   77 (328)
                      ....+|+|+|+ |.+|+++++.|...|. +|++++.+.-....+..+..                    .  .....++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34568999995 9999999999999997 89999986422111111000                    0  00111111


Q ss_pred             c----CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeec
Q 020254           78 A----EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG  150 (328)
Q Consensus        78 ~----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg  150 (328)
                      .    +.+.+.++++++|+||.+..                  |...-..+-++|.+  .+ .++|+.++.+.  ||
T Consensus       101 ~~~~~~~~~~~~~~~~~DlVid~~D------------------n~~~r~~ln~~~~~--~~-iP~i~~~~~g~--~G  154 (339)
T PRK07688        101 IVQDVTAEELEELVTGVDLIIDATD------------------NFETRFIVNDAAQK--YG-IPWIYGACVGS--YG  154 (339)
T ss_pred             EeccCCHHHHHHHHcCCCEEEEcCC------------------CHHHHHHHHHHHHH--hC-CCEEEEeeeee--ee
Confidence            1    34556677888999999853                  22223356677777  34 56778776554  55

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.23  E-value=0.00042  Score=53.36  Aligned_cols=74  Identities=14%  Similarity=0.119  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+|+ |.+|..+++.|.+.| ++|++++|++.+........... ....+.   .+..+.++++|+||.++...
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-GIAIAY---LDLEELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-ccceee---cchhhccccCCEEEeCcCCC
Confidence            3578999996 999999999999986 89999999876554432221100 001222   23445578899999998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=97.22  E-value=0.0022  Score=54.67  Aligned_cols=75  Identities=21%  Similarity=0.429  Sum_probs=53.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCce----eecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGV----MIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~----d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +|+|.|+| +|--|.+|+..|.++||+|+..+|++.-..++.... ....++.+    ++.-..++.++++++|+|+...
T Consensus         1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             CceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            47899999 599999999999999999999999876544433221 11112221    3334567888889999998875


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        80 P   80 (329)
T COG0240          80 P   80 (329)
T ss_pred             C
Confidence            3

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.21  E-value=0.00079  Score=57.70  Aligned_cols=69  Identities=20%  Similarity=0.138  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++|+|+|. |.+|+.+++.|...|.+|++++|++.........       .++....+++.+.+.++|+||+++.
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~-------G~~~~~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEM-------GLSPFHLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-------CCeeecHHHHHHHhCCCCEEEECCC
Confidence            3579999995 8899999999999999999999997653322221       1333445667788889999999864

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.21  E-value=0.0038  Score=53.34  Aligned_cols=71  Identities=25%  Similarity=0.340  Sum_probs=41.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--e-EEEEecCCCcccccCCCCCccccCceeecCChhhH--hhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH--Q-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR--DCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~d~vi~~a   97 (328)
                      +++|.|+||||.+|+.+++.|.++.+  + +.++....+...+...      +.+-.+.-++...  ..++++|+++.++
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~------f~~~~~~v~~~~~~~~~~~~~Divf~~a   74 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIE------FGGKSIGVPEDAADEFVFSDVDIVFFAA   74 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCcccc------ccCccccCccccccccccccCCEEEEeC
Confidence            47899999999999999999999653  2 4444443333222111      1110011111111  1223899999999


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      |.
T Consensus        75 g~   76 (334)
T COG0136          75 GG   76 (334)
T ss_pred             ch
Confidence            74

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.21  E-value=0.0016  Score=55.50  Aligned_cols=66  Identities=23%  Similarity=0.257  Sum_probs=47.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+| .|.+|..++..|.+.|++|++++|++...........      ++.... .. +.+.++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~------~~~~~~-~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL------VDEAST-DL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------cccccC-CH-hHhcCCCEEEEcCC
Confidence            5899999 7999999999999999999999998765444322211      111111 12 34678999999964

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.21  E-value=0.0025  Score=54.63  Aligned_cols=58  Identities=14%  Similarity=0.249  Sum_probs=41.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||++|.|.||||++|..|++.|.++.+ ++..+..+...                ++   ...+..+.++|+||.+..
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------~~---~~~~~~~~~~DvvFlalp   59 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------DA---AARRELLNAADVAILCLP   59 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------cc---cCchhhhcCCCEEEECCC
Confidence            467999999999999999999998763 66655544321                11   112344567999999874

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.20  E-value=0.00087  Score=58.60  Aligned_cols=76  Identities=21%  Similarity=0.138  Sum_probs=52.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC----CCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~   96 (328)
                      ...+.|||.||+|.+|++.++.+...|..+++.+++.+..+.....+.   -.-+|+.+++..+...+    ++|+|++|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD~  232 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLDC  232 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEEC
Confidence            345789999999999999999999999444445555555444433322   22356666555554444    69999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      ++.
T Consensus       233 vg~  235 (347)
T KOG1198|consen  233 VGG  235 (347)
T ss_pred             CCC
Confidence            985

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.20  E-value=0.00054  Score=58.27  Aligned_cols=74  Identities=12%  Similarity=0.168  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++++|+|+ |.+|++++..|.+.| .+|++++|+..+...+......  ...+++ + ....+.+.++|+||++....
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~--~~~~~~-~-~~~~~~~~~~DivInaTp~g  196 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA--LGKAEL-D-LELQEELADFDLIINATSAG  196 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh--ccceee-c-ccchhccccCCEEEECCcCC
Confidence            4568999995 999999999999999 7999999997765544322110  111233 1 12345667899999998753

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.20  E-value=0.0012  Score=60.29  Aligned_cols=77  Identities=14%  Similarity=0.221  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCce----------eecCChhhHhhcCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQGS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~~   90 (328)
                      ||+|.|.| .|++|..++..|.+.|  ++|++++.++.+...+........-..+          .+.-..++.++++++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            58999998 7999999999999884  8899999988775554322110000000          121223345667889


Q ss_pred             cEEEECCCCC
Q 020254           91 TAVVNLAGTP  100 (328)
Q Consensus        91 d~vi~~a~~~  100 (328)
                      |++|-|.+.+
T Consensus        80 dvi~I~V~TP   89 (473)
T PLN02353         80 DIVFVSVNTP   89 (473)
T ss_pred             CEEEEEeCCC
Confidence            9999998765

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.19  E-value=0.00045  Score=63.27  Aligned_cols=73  Identities=15%  Similarity=0.217  Sum_probs=55.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++........... ......|..+.+.++++ +.++|.|+-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~-~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLD-VRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcC-EEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            68999996 999999999999999999999998876554432111 01233567777777777 778999988864

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.19  E-value=0.0047  Score=46.34  Aligned_cols=101  Identities=12%  Similarity=0.215  Sum_probs=62.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC----c--------------cccCceeec------
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK----T--------------RFFPGVMIA------   78 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~----~--------------~~~~~~d~~------   78 (328)
                      ++|+|.| .|.+|+.+++.|...|. ++++++...-....+..+..    .              ...+.+++.      
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            5899999 69999999999999996 78888886544333322110    0              001111111      


Q ss_pred             CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           79 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        79 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      +.+.+.+.++++|+||.+...                  ......+.+.|++  .+ .++++.++.+.
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~--~~-~p~i~~~~~g~  128 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDS------------------LAARLLLNEICRE--YG-IPFIDAGVNGF  128 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSS------------------HHHHHHHHHHHHH--TT--EEEEEEEETT
T ss_pred             ccccccccccCCCEEEEecCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeecC
Confidence            335566777899999998642                  2223356677877  33 36666666544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.16  E-value=0.0011  Score=58.89  Aligned_cols=55  Identities=22%  Similarity=0.301  Sum_probs=44.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+++|.|+||.|.+|+.+++.|.+.||.|++++|+..                      +..++++.++|+||.|..
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~----------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW----------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc----------------------hhHHHHHhcCCEEEEeCc
Confidence            4579999999999999999999999999999998531                      123455677888888864

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.13  E-value=0.0046  Score=54.01  Aligned_cols=36  Identities=19%  Similarity=0.291  Sum_probs=31.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      .+.++|+|+|+ |.+|+++++.|...|. ++++++++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            34568999994 8899999999999997 888898875

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.13  E-value=0.0031  Score=46.35  Aligned_cols=73  Identities=21%  Similarity=0.243  Sum_probs=42.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ||.|+|++|.+|..+++.|.+. ++++.++ +|+.+...............-.+..+.+.++  ..++|+||.+...
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~~   75 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALPH   75 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChh--hcCCCEEEEcCCc
Confidence            5899999999999999999984 7888888 4432222111110000000001122333333  2579999999764

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.11  E-value=0.00059  Score=55.89  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=49.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCce--eecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGV--MIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~--d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+||+|.+|+.+++.|.+.||+|++.+|++++........... ....+  .+.. .+..+.++++|+||-+.-
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilavp   77 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAVP   77 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEECC
Confidence            68999999999999999999999999999999876543322110000 00001  1111 123456778999999864

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.11  E-value=0.002  Score=50.04  Aligned_cols=57  Identities=21%  Similarity=0.329  Sum_probs=47.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ...++|+|+|+++.+|..+++.|.++|.+|+++.|..                       +++.+.+.++|+||.+.+.+
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat~~~   98 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------KNLKEHTKQADIVIVAVGKP   98 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------hhHHHHHhhCCEEEEcCCCC
Confidence            4568999999876789999999999999999888752                       34567888999999998864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.10  E-value=0.0041  Score=53.56  Aligned_cols=110  Identities=20%  Similarity=0.245  Sum_probs=68.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      |.|+|+ |.+|..++..|+..|. +|+++++++........   ...........+....+. +.++++|+||.+++.+.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~   78 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR   78 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence            578997 9999999999998876 99999998754321110   000000111233222233 45789999999998753


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEe
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  142 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  142 (328)
                      ..   .....+....|+...+.+++.+.+.  ....++.+-
T Consensus        79 ~~---~~~r~e~~~~n~~i~~~i~~~i~~~--~p~~~iIv~  114 (300)
T cd01339          79 KP---GMSRDDLLGTNAKIVKEVAENIKKY--APNAIVIVV  114 (300)
T ss_pred             Cc---CCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEe
Confidence            32   2234456667888888998888883  334443333

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.10  E-value=0.00085  Score=60.08  Aligned_cols=74  Identities=20%  Similarity=0.232  Sum_probs=56.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|+|+|+ |-.|+.+++.|.+.| .+|+++.|+..+...+...     +........+++.+.+.++|+||++.+.
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-----~~~~~~~~~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-----FRNASAHYLSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-----hcCCeEecHHHHHHHhccCCEEEECcCC
Confidence            34579999995 999999999999998 5799999987765554432     1112344556778888999999999886


Q ss_pred             C
Q 020254          100 P  100 (328)
Q Consensus       100 ~  100 (328)
                      +
T Consensus       253 ~  253 (414)
T PRK13940        253 L  253 (414)
T ss_pred             C
Confidence            4

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.09  E-value=0.0007  Score=58.26  Aligned_cols=66  Identities=12%  Similarity=0.244  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|+|.|+| .|.+|..+++.|.+.|++|++.+|++.+........       +.  -.++..++++++|+||-+..
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g-------~~--~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAG-------AE--TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------Ce--ecCCHHHHHhcCCEEEEeCC
Confidence            57899999 799999999999999999999999876544332211       11  12345566778999998864

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.08  E-value=0.0048  Score=54.03  Aligned_cols=71  Identities=13%  Similarity=0.113  Sum_probs=41.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh-CCCe---EEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |++|.|+||||++|+.+++.|++ ..+.   ++.++.+...... ..... ......+..+.+    .+.++|+||.+++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~-~~f~g-~~~~v~~~~~~~----~~~~~Divf~a~~   74 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAA-PSFGG-KEGTLQDAFDID----ALKKLDIIITCQG   74 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcc-cccCC-CcceEEecCChh----HhcCCCEEEECCC
Confidence            47999999999999999996655 4555   6665554322221 11100 001111222222    2367999999986


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus        75 ~   75 (369)
T PRK06598         75 G   75 (369)
T ss_pred             H
Confidence            3

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.07  E-value=0.00085  Score=49.38  Aligned_cols=69  Identities=22%  Similarity=0.269  Sum_probs=40.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ...++|-|+|+ |-+|.+|++.|.+.||.|..+. |+..........     .......   ++.+.++.+|++|-+..
T Consensus         8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~-----~~~~~~~---~~~~~~~~aDlv~iavp   77 (127)
T PF10727_consen    8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAF-----IGAGAIL---DLEEILRDADLVFIAVP   77 (127)
T ss_dssp             ----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT--------TTGGGCC-SEEEE-S-
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc-----ccccccc---ccccccccCCEEEEEec
Confidence            34579999995 9999999999999999998874 544333333221     1122222   33456678899988854

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.06  E-value=0.0049  Score=49.70  Aligned_cols=103  Identities=11%  Similarity=0.062  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCC-------C-----------cc--ccCceeec--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK-------K-----------TR--FFPGVMIA--   78 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-------~-----------~~--~~~~~d~~--   78 (328)
                      ...+|+|.| .|.+|+.+++.|...|. ++++++.+.-....+..+.       .           ..  ....++..  
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~   98 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE   98 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence            456899999 79999999999999995 8999888732211111100       0           00  01111111  


Q ss_pred             --CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           79 --EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        79 --~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                        +.+.+.+.++++|+||.+...                  ...-..+-+.|.+  .+ .++++.++.+.
T Consensus        99 ~i~~~~~~~~~~~~D~Vi~~~d~------------------~~~r~~l~~~~~~--~~-ip~i~~~~~g~  147 (202)
T TIGR02356        99 RVTAENLELLINNVDLVLDCTDN------------------FATRYLINDACVA--LG-TPLISAAVVGF  147 (202)
T ss_pred             cCCHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeccC
Confidence              345567778899999998642                  1222345577777  34 46777776544

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.06  E-value=0.00094  Score=53.73  Aligned_cols=67  Identities=18%  Similarity=0.220  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-CCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~   98 (328)
                      ..|+|+|+|. |.+|+++++.|.+.|++|++.++++.........     + .....+.+   +++. ++|+++.+|.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~-----~-g~~~v~~~---~l~~~~~Dv~vp~A~   94 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL-----F-GATVVAPE---EIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-----c-CCEEEcch---hhccccCCEEEeccc
Confidence            4579999995 8999999999999999999998876544333221     1 12233333   2332 7999998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.05  E-value=0.0027  Score=53.04  Aligned_cols=103  Identities=17%  Similarity=0.214  Sum_probs=74.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~   96 (328)
                      ...+|+|.||+|-+|+-..+...-.|.+|+++.-++++...+.....  .-..+|.... ++.+.|     +++|+.|.|
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG--fD~~idyk~~-d~~~~L~~a~P~GIDvyfeN  226 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG--FDAGIDYKAE-DFAQALKEACPKGIDVYFEN  226 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC--CceeeecCcc-cHHHHHHHHCCCCeEEEEEc
Confidence            35689999999999999998888789999999999888776665332  0123455444 343333     489999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS  152 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~  152 (328)
                      .|.                       .+++++....+...|++.+.-.+-  |..+
T Consensus       227 VGg-----------------------~v~DAv~~~ln~~aRi~~CG~IS~--YN~~  257 (340)
T COG2130         227 VGG-----------------------EVLDAVLPLLNLFARIPVCGAISQ--YNAP  257 (340)
T ss_pred             CCc-----------------------hHHHHHHHhhccccceeeeeehhh--cCCC
Confidence            885                       555666554344568888888777  7754

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=97.05  E-value=0.00074  Score=52.15  Aligned_cols=73  Identities=19%  Similarity=0.411  Sum_probs=47.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCce----eecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||.|+| +|-.|.+++..|.++|++|++.+|++.....+...... ..+..+    .+.-.++++++++++|+|+.+..
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence            689999 59999999999999999999999987543322211100 001111    11123567888999999998753

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=97.04  E-value=0.0025  Score=58.89  Aligned_cols=76  Identities=14%  Similarity=0.134  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----------CCccccCc-eeecCChhhHhhcCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------KKTRFFPG-VMIAEEPQWRDCIQGS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~~~-~d~~~~~~~~~~~~~~   90 (328)
                      +.|+|.|+| +|.+|..++..|++.|++|++.++++.........          ........ ..+.-.+++.++++++
T Consensus         3 ~i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~a   81 (495)
T PRK07531          3 MIMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGA   81 (495)
T ss_pred             CcCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCC
Confidence            346899998 79999999999999999999999987764332100          00000000 0122234566778899


Q ss_pred             cEEEECCC
Q 020254           91 TAVVNLAG   98 (328)
Q Consensus        91 d~vi~~a~   98 (328)
                      |+|+-+..
T Consensus        82 D~Vieavp   89 (495)
T PRK07531         82 DWIQESVP   89 (495)
T ss_pred             CEEEEcCc
Confidence            99998864

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.03  E-value=0.0058  Score=50.69  Aligned_cols=96  Identities=13%  Similarity=0.099  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~   99 (328)
                      +|++|+|+|||+ =|+.|++.|.+.|+.|++..-..........  .  ......+-+.+.+.+.++  ++++||+....
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~~~~--~--~v~~G~l~~~~~l~~~l~~~~i~~VIDATHP   75 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPADLP--G--PVRVGGFGGAEGLAAYLREEGIDLVIDATHP   75 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCcccCC--c--eEEECCCCCHHHHHHHHHHCCCCEEEECCCc
Confidence            467899999986 5999999999999988776665543311111  0  011122337788999885  79999999764


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEE
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  140 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  140 (328)
                      .                -...++++.++|++  .++..+-|
T Consensus        76 f----------------A~~is~~a~~ac~~--~~ipyiR~   98 (248)
T PRK08057         76 Y----------------AAQISANAAAACRA--LGIPYLRL   98 (248)
T ss_pred             c----------------HHHHHHHHHHHHHH--hCCcEEEE
Confidence            2                12346788899999  56665444

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.02  E-value=0.0026  Score=55.22  Aligned_cols=75  Identities=12%  Similarity=0.140  Sum_probs=50.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CC--c-----cccCceeecCChhhHhhcC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KK--T-----RFFPGVMIAEEPQWRDCIQ   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~--~-----~~~~~~d~~~~~~~~~~~~   88 (328)
                      ++.++|.|+| +|.+|..++..|++.|++|+++++++.........     ..  .     .....+..  .++..++++
T Consensus         2 ~~~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~   78 (311)
T PRK06130          2 NPIQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM--EAGLAAAVS   78 (311)
T ss_pred             CCccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE--eCCHHHHhc
Confidence            3457899999 59999999999999999999999987654332210     00  0     00001111  234556678


Q ss_pred             CCcEEEECCC
Q 020254           89 GSTAVVNLAG   98 (328)
Q Consensus        89 ~~d~vi~~a~   98 (328)
                      ++|+||-+.-
T Consensus        79 ~aDlVi~av~   88 (311)
T PRK06130         79 GADLVIEAVP   88 (311)
T ss_pred             cCCEEEEecc
Confidence            8999999864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.01  E-value=0.0011  Score=57.43  Aligned_cols=71  Identities=20%  Similarity=0.269  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+|+ |-+|..+++.|...| .+|++++|++.+...+....      +.+..+.+++.+.+.++|+||.+.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------GGNAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------CCeEEeHHHHHHHHhcCCEEEECCCC
Confidence            4689999995 999999999999866 78999999877654443321      12344455677778899999999875

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=97.00  E-value=0.0032  Score=53.22  Aligned_cols=70  Identities=17%  Similarity=0.233  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++++|.|+| .|.||+.+++.|.+.  ++++.++ +|++.+.......     +....  -.+++++++.++|+|+-++.
T Consensus         5 ~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~-----~g~~~--~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          5 PELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG-----LRRPP--PVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             CeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh-----cCCCc--ccCCHHHHhcCCCEEEECCC
Confidence            458999999 799999999999873  6787754 5554443332221     10001  12345566678999999976


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus        77 ~   77 (271)
T PRK13302         77 A   77 (271)
T ss_pred             c
Confidence            3

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.00  E-value=0.0015  Score=58.05  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ||+|+|+|+ |.+|+.++..+.+.|++|++++.++..........    ....++.|.+.+.++++.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad~----~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVADE----VIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCce----EEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999996 89999999999999999999998765433222211    233577788899999999998754

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.00  E-value=0.0068  Score=52.74  Aligned_cols=71  Identities=24%  Similarity=0.365  Sum_probs=43.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCe---EEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ..++|.|+||||++|+.+++.|.+ ..+.   +..++...+......-.     ...+.+.+.+.  ..+.++|+||.++
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~-----~~~l~v~~~~~--~~~~~~Divf~a~   76 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFK-----GREIIIQEAKI--NSFEGVDIAFFSA   76 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeC-----CcceEEEeCCH--HHhcCCCEEEECC
Confidence            346999999999999999999995 5555   66665554332222110     01122222211  2236799999998


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      +.
T Consensus        77 ~~   78 (347)
T PRK06728         77 GG   78 (347)
T ss_pred             Ch
Confidence            63

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.99  E-value=0.00088  Score=56.71  Aligned_cols=67  Identities=19%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||+|.|+| .|.+|..+++.|.+.|   ++|++++|++..........      ++.+.  ++..+.++++|+||-+.
T Consensus         1 ~mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~------g~~~~--~~~~~~~~~advVil~v   70 (267)
T PRK11880          1 MMKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY------GVRAA--TDNQEAAQEADVVVLAV   70 (267)
T ss_pred             CCCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc------CCeec--CChHHHHhcCCEEEEEc
Confidence            468999999 5999999999999988   78999999876544332210      12222  23345567899999875

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.97  E-value=0.0058  Score=53.63  Aligned_cols=34  Identities=32%  Similarity=0.549  Sum_probs=28.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   57 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~   57 (328)
                      |+|.|+|+||++|++|++.|.+.+ .+|..+..+.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            589999999999999999998876 5888874443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.97  E-value=0.0061  Score=54.34  Aligned_cols=74  Identities=16%  Similarity=0.213  Sum_probs=49.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcccc---------CceeecCChhhHhhcCCCcEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF---------PGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      |+|.|.| .|++|..++..|. .||+|+++++++.+...+........-         ....+....+..++..++|+||
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi   78 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI   78 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence            5899998 7999999997666 599999999998876554432110000         0122322233445567899999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      -+...
T Consensus        79 i~Vpt   83 (388)
T PRK15057         79 IATPT   83 (388)
T ss_pred             EeCCC
Confidence            99764

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.97  E-value=0.0011  Score=56.90  Aligned_cols=74  Identities=12%  Similarity=0.175  Sum_probs=50.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc--------ccCc-------eeecCChhhHhhcC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR--------FFPG-------VMIAEEPQWRDCIQ   88 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~-------~d~~~~~~~~~~~~   88 (328)
                      ++|.|+|+ |.+|..++..|++.|++|+++++++.............        ....       -.+.-.+++.+.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999995 99999999999999999999999877654422100000        0000       00112235667788


Q ss_pred             CCcEEEECCC
Q 020254           89 GSTAVVNLAG   98 (328)
Q Consensus        89 ~~d~vi~~a~   98 (328)
                      ++|+||-+..
T Consensus        81 ~aD~Vi~avp   90 (288)
T PRK09260         81 DADLVIEAVP   90 (288)
T ss_pred             CCCEEEEecc
Confidence            9999999965

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.96  E-value=0.00067  Score=47.55  Aligned_cols=66  Identities=24%  Similarity=0.350  Sum_probs=47.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC---CeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN---HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||.|+| +|-+|.+|++.|++.|   ++|... +|++++..++....      .+.+.. .+..++++.+|+||.+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~------~~~~~~-~~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY------GVQATA-DDNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC------TTEEES-EEHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh------cccccc-CChHHhhccCCEEEEEEC
Confidence            578886 8999999999999999   999955 88888776654321      123322 235566678999999964

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.95  E-value=0.0033  Score=57.62  Aligned_cols=76  Identities=18%  Similarity=0.234  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|+++++++..................|..+.+.++++ ++++|+|+-+..
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence            4689999996 999999999999999999999999876544332211011233477777777543 468999987654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.94  E-value=0.00077  Score=53.23  Aligned_cols=68  Identities=26%  Similarity=0.186  Sum_probs=49.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      -..++|.|+| .|-||+.+++.|..-|.+|++++|+.........       ..+   ...+++++++++|+|+.+...
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-------~~~---~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-------FGV---EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-------TTE---EESSHHHHHHH-SEEEE-SSS
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-------ccc---eeeehhhhcchhhhhhhhhcc
Confidence            3467999999 7999999999999999999999999875441110       012   344677888889999888764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.93  E-value=0.0022  Score=54.87  Aligned_cols=75  Identities=13%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---c-----cccCc--------eeecCChhhHhh
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---T-----RFFPG--------VMIAEEPQWRDC   86 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~-----~~~~~--------~d~~~~~~~~~~   86 (328)
                      .++|.|+| +|.+|..++..|++.|++|+++++++...........   .     .....        -.+.-.++++++
T Consensus         3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a   81 (287)
T PRK08293          3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA   81 (287)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence            36899999 5999999999999999999999998764332211000   0     00000        011112456677


Q ss_pred             cCCCcEEEECCC
Q 020254           87 IQGSTAVVNLAG   98 (328)
Q Consensus        87 ~~~~d~vi~~a~   98 (328)
                      ++++|.||.+..
T Consensus        82 ~~~aDlVieavp   93 (287)
T PRK08293         82 VKDADLVIEAVP   93 (287)
T ss_pred             hcCCCEEEEecc
Confidence            889999999975

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.92  E-value=0.0097  Score=49.33  Aligned_cols=102  Identities=15%  Similarity=0.091  Sum_probs=62.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCC--------c----------c--ccCceeec--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKK--------T----------R--FFPGVMIA--   78 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~--------~----------~--~~~~~d~~--   78 (328)
                      ...+|+|.| .|.+|+.+++.|...| -++++++.+.-....+..+..        .          .  ....++..  
T Consensus        23 ~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~  101 (240)
T TIGR02355        23 KASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA  101 (240)
T ss_pred             hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            456899999 6999999999999999 478888876543322221100        0          0  01111111  


Q ss_pred             --CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254           79 --EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus        79 --~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                        +.+.+.+.++++|+||.+...                  ......+-++|.+  . ..++|+-++.+
T Consensus       102 ~i~~~~~~~~~~~~DlVvd~~D~------------------~~~r~~ln~~~~~--~-~ip~v~~~~~g  149 (240)
T TIGR02355       102 KLDDAELAALIAEHDIVVDCTDN------------------VEVRNQLNRQCFA--A-KVPLVSGAAIR  149 (240)
T ss_pred             cCCHHHHHHHhhcCCEEEEcCCC------------------HHHHHHHHHHHHH--c-CCCEEEEEecc
Confidence              344566778899999998642                  1222345577777  3 34677655544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.91  E-value=0.0044  Score=56.73  Aligned_cols=74  Identities=15%  Similarity=0.054  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-CCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~~~  100 (328)
                      .++|+|+|++| +|.+.++.|++.|++|++.+++............   -.++++.....-...+. ++|.||...|+.
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL---EEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH---hcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            46899999977 9999999999999999999876533221111000   01123321111112234 489999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.90  E-value=0.0034  Score=54.67  Aligned_cols=74  Identities=28%  Similarity=0.234  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhcC--CCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vi~~a   97 (328)
                      ..+|||+||+|.+|...++.+...|..+++++.++.+.......+.   -.-++..+.+   .++++..  ++|+|+++.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGA---d~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGA---DHVINYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            5689999999999999999999999776666666655543333322   1123443433   2233332  699999998


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      |.
T Consensus       220 G~  221 (326)
T COG0604         220 GG  221 (326)
T ss_pred             CH
Confidence            74

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.90  E-value=0.01  Score=51.91  Aligned_cols=70  Identities=17%  Similarity=0.256  Sum_probs=42.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHH-hCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQ-ADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~-~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |+|.|+||||.+|+.+++.|. ++.+   +++.++.+.+.........     ....+.+.+.. ..+.++|+++.+++.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~-----~~~~v~~~~~~-~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGG-----TTGTLQDAFDI-DALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCC-----CcceEEcCccc-ccccCCCEEEEcCCH
Confidence            579999999999999999999 5554   4455544433322221111     11222222221 245789999999874

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.89  E-value=0.0049  Score=52.63  Aligned_cols=39  Identities=23%  Similarity=0.269  Sum_probs=34.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   62 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   62 (328)
                      +.+|.|+|+ |.+|..++..|+..|++|+++++++.....
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            358999995 999999999999999999999999876544

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.89  E-value=0.0017  Score=56.82  Aligned_cols=75  Identities=21%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCce----eecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +|+|.|+| +|-+|..++..|.+.||+|++++|++.....+...... ....+.    .+.-.++..++++++|+|+-+.
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v   82 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV   82 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence            57999998 69999999999999999999999976543322211000 000010    1222234556677899999886


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      -
T Consensus        83 ~   83 (328)
T PRK14618         83 P   83 (328)
T ss_pred             c
Confidence            4

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.88  E-value=0.0016  Score=58.74  Aligned_cols=73  Identities=16%  Similarity=0.249  Sum_probs=54.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|+|+|+ |-+|..+++.|...| .+|++++|+..+...+....      +....+.+++.+.+.++|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~------g~~~i~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL------GGEAVKFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------CCeEeeHHHHHHHHhhCCEEEECCCC
Confidence            34579999995 999999999999999 78999999876644333221      11223445677788899999999875


Q ss_pred             C
Q 020254          100 P  100 (328)
Q Consensus       100 ~  100 (328)
                      +
T Consensus       251 ~  251 (417)
T TIGR01035       251 P  251 (417)
T ss_pred             C
Confidence            3

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.88  E-value=0.011  Score=48.70  Aligned_cols=103  Identities=14%  Similarity=0.110  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCC-------CCc-----------c--ccCceeec--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG-------KKT-----------R--FFPGVMIA--   78 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-------~~~-----------~--~~~~~d~~--   78 (328)
                      ...+|+|.| .|.+|+++++.|...|. ++++++...-....+..+       ...           .  ....++..  
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~   98 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE   98 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence            456899999 79999999999999995 777776653222211111       000           0  01112211  


Q ss_pred             --CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           79 --EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        79 --~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                        +.+.+.+.++++|+||.+...                  ...-..+-++|.+  .+ .++|+.+..+.
T Consensus        99 ~i~~~~~~~~~~~~DvVi~~~d~------------------~~~r~~l~~~~~~--~~-ip~i~~g~~g~  147 (228)
T cd00757          99 RLDAENAEELIAGYDLVLDCTDN------------------FATRYLINDACVK--LG-KPLVSGAVLGF  147 (228)
T ss_pred             eeCHHHHHHHHhCCCEEEEcCCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeccC
Confidence              345566777889999999642                  1122345677777  34 57777766554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK04148 hypothetical protein; Provisional

Probab=96.88  E-value=0.0051  Score=45.51  Aligned_cols=68  Identities=9%  Similarity=0.023  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      .++|++.| +| .|.+++..|.+.|++|++++.++...........  .....|+.+++-  ++-+++|.|+.+
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~--~~v~dDlf~p~~--~~y~~a~liysi   84 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGL--NAFVDDLFNPNL--EIYKNAKLIYSI   84 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCC--eEEECcCCCCCH--HHHhcCCEEEEe
Confidence            47899999 67 8999999999999999999999886443322211  133456665542  444678999887

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.85  E-value=0.0017  Score=55.35  Aligned_cols=76  Identities=14%  Similarity=0.182  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+| +|..|++++..|.+.|. +|++++|+..+...+...... .+..+.+...+++.+.+.++|+||++...
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~-~~~~~~~~~~~~~~~~~~~aDiVInaTp~  202 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA-RFPAARATAGSDLAAALAAADGLVHATPT  202 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh-hCCCeEEEeccchHhhhCCCCEEEECCcC
Confidence            346899999 58899999999999996 899999987766554322100 01112333334555667889999999643

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.85  E-value=0.012  Score=49.74  Aligned_cols=33  Identities=30%  Similarity=0.473  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEec
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTR   55 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r   55 (328)
                      ||||.|.|++|.+|+.+++.+.+ .+.++.++..
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            37999999999999999999986 4688777654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.84  E-value=0.0087  Score=48.09  Aligned_cols=35  Identities=20%  Similarity=0.288  Sum_probs=30.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS   56 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~   56 (328)
                      ....+|+|.|+ |.+|+.++..|...|. ++++++++
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34578999995 8899999999999997 79999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.84  E-value=0.0022  Score=55.54  Aligned_cols=69  Identities=16%  Similarity=0.175  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +.++|.|+| +|.+|..++..|.+.|+  +|++++|++..........    . ....  ..+..+.+.++|+||.++.
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g----~-~~~~--~~~~~~~~~~aDvViiavp   75 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELG----L-GDRV--TTSAAEAVKGADLVILCVP   75 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCC----C-Ccee--cCCHHHHhcCCCEEEECCC
Confidence            447899999 89999999999999884  8999999876543332211    0 0011  1234556778999999975

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.83  E-value=0.0057  Score=52.69  Aligned_cols=39  Identities=23%  Similarity=0.467  Sum_probs=33.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   63 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   63 (328)
                      |+|.|+| .|.+|+.+++.|++.|++|++.+|++.+....
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~   39 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVA   39 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            4799998 79999999999999999999999987655443

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.83  E-value=0.0051  Score=53.04  Aligned_cols=39  Identities=26%  Similarity=0.442  Sum_probs=34.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   63 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   63 (328)
                      |+|.|+| .|-+|+.+++.|++.|++|++.+|++.+....
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~   39 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEAL   39 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            5899999 79999999999999999999999998765544

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.82  E-value=0.0068  Score=48.42  Aligned_cols=67  Identities=22%  Similarity=0.280  Sum_probs=46.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD--NH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~--g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |+|.|.| +|.||..|++.+.+.  +. .+.+++|+.++..+....     +...   ...++++.+..+|.++-||+.
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~-----~~~~---~~s~ide~~~~~DlvVEaAS~   70 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEAS-----VGRR---CVSDIDELIAEVDLVVEAASP   70 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhh-----cCCC---ccccHHHHhhccceeeeeCCH
Confidence            5799999 799999999998764  34 466678887776655443     1111   224556666778888888763

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.80  E-value=0.0051  Score=51.88  Aligned_cols=67  Identities=16%  Similarity=0.213  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEE-EEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD--NHQVR-VLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||+|.|.| .|.+|+.+++.|.+.  ++++. +++|++.+.......        .+..-.+++++++.++|+|+.|+.
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~--------~~~~~~~~~~ell~~~DvVvi~a~   70 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK--------TGAKACLSIDELVEDVDLVVECAS   70 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh--------cCCeeECCHHHHhcCCCEEEEcCC
Confidence            47999999 699999999999876  45644 455655443332221        111122345666688999999975

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.79  E-value=0.002  Score=55.33  Aligned_cols=65  Identities=14%  Similarity=0.263  Sum_probs=49.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|.|+| .|.+|..+++.|++.||+|++++|++.+........       ..  ...+..++++++|+||-+..
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-------~~--~~~s~~~~~~~aDvVi~~vp   66 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-------AT--PAASPAQAAAGAEFVITMLP   66 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-------Cc--ccCCHHHHHhcCCEEEEecC
Confidence            5899999 799999999999999999999999887655443221       11  22234566778899888864

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.79  E-value=0.002  Score=58.32  Aligned_cols=73  Identities=22%  Similarity=0.291  Sum_probs=54.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|+|+|+ |-+|..+++.|...|. +|++++|++.+...+....      +.+..+.+++.+.+.++|+||.+.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF------GGEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------CCcEeeHHHHHHHhccCCEEEECCCC
Confidence            34579999995 9999999999999996 8999999876654433221      12334446667778899999999875


Q ss_pred             C
Q 020254          100 P  100 (328)
Q Consensus       100 ~  100 (328)
                      +
T Consensus       253 ~  253 (423)
T PRK00045        253 P  253 (423)
T ss_pred             C
Confidence            3

>PLN00203 glutamyl-tRNA reductase

Probab=96.74  E-value=0.0025  Score=58.66  Aligned_cols=75  Identities=19%  Similarity=0.250  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+|+ |-+|..+++.|...|. +|+++.|+..+...+.....   ...+.+...+++.+++.++|+||.+.+..
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~~~~~~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEIIYKPLDEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence            4579999996 9999999999999995 79999999877655443210   01123345566777888999999997653

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=96.72  E-value=0.029  Score=47.07  Aligned_cols=102  Identities=14%  Similarity=0.183  Sum_probs=61.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCC-------C-------------ccccCcee----ecC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK-------K-------------TRFFPGVM----IAE   79 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-------~-------------~~~~~~~d----~~~   79 (328)
                      =|+|.| .|.+|++++..|++.|. ++.+++-..-....+..+.       .             ...+..+|    +.+
T Consensus        76 yVVVVG-~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar~~l~~  154 (430)
T KOG2018|consen   76 YVVVVG-AGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDARNMLWT  154 (430)
T ss_pred             EEEEEe-cCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHHHhhcC
Confidence            477888 69999999999999995 6666665432222211110       0             00011111    224


Q ss_pred             ChhhHhhc-CCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeec
Q 020254           80 EPQWRDCI-QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG  150 (328)
Q Consensus        80 ~~~~~~~~-~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg  150 (328)
                      .+.-++++ .++|.|+.|.                  .|++.-..++++|..  ++.+   .+||++++.-.
T Consensus       155 ~~s~edll~gnPdFvvDci------------------DNidtKVdLL~y~~~--~~l~---Viss~Gaaaks  203 (430)
T KOG2018|consen  155 SSSEEDLLSGNPDFVVDCI------------------DNIDTKVDLLEYCYN--HGLK---VISSTGAAAKS  203 (430)
T ss_pred             CCchhhhhcCCCCeEeEhh------------------hhhhhhhHHHHHHHH--cCCc---eEeccCccccC
Confidence            44444444 3689999995                  466777789999999  5554   67777764333

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.72  E-value=0.012  Score=50.27  Aligned_cols=56  Identities=13%  Similarity=0.232  Sum_probs=40.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      -||.|.|||||.|..|++.|.... .++..++.+..                .   ++.+.+++++++|+||.++.
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------~---~~~~~~~~~~~~D~vFlalp   58 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------K---DAAERAKLLNAADVAILCLP   58 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------c---CcCCHhHhhcCCCEEEECCC
Confidence            379999999999999999999875 46665543321                0   11123456678999999875

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK08328 hypothetical protein; Provisional

Probab=96.71  E-value=0.018  Score=47.49  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      ...+|+|.| .|.+|+++++.|...|. ++++++...
T Consensus        26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            456899999 69999999999999994 788887654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.70  E-value=0.023  Score=45.65  Aligned_cols=35  Identities=14%  Similarity=0.321  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~   57 (328)
                      +..+|+|.|++| +|.++++.|...| .++++++...
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            456899999655 9999999999999 5788888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.70  E-value=0.023  Score=46.03  Aligned_cols=100  Identities=15%  Similarity=0.206  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCC-------CCc-----------cccCce------ee
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG-------KKT-----------RFFPGV------MI   77 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-------~~~-----------~~~~~~------d~   77 (328)
                      ..+|+|+| -|.+|++.++.|.+.|. ++++++-..-.......+       ...           .-.+.+      ++
T Consensus        30 ~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          30 QAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            45899999 59999999999999985 677776643221111110       000           000111      33


Q ss_pred             cCChhhHhhcC-CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           78 AEEPQWRDCIQ-GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        78 ~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      .+++.+++++. ++|.||.+.-                  |+..-..+++.|.+  ++.   -++||++.
T Consensus       109 ~t~en~~~~~~~~~DyvIDaiD------------------~v~~Kv~Li~~c~~--~ki---~vIss~Ga  155 (263)
T COG1179         109 ITEENLEDLLSKGFDYVIDAID------------------SVRAKVALIAYCRR--NKI---PVISSMGA  155 (263)
T ss_pred             hCHhHHHHHhcCCCCEEEEchh------------------hhHHHHHHHHHHHH--cCC---CEEeeccc
Confidence            36777777775 6999999852                  34445578889998  433   47888776

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.70  E-value=0.012  Score=48.92  Aligned_cols=35  Identities=23%  Similarity=0.215  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      ...+|+|+|+ |.+|+.+++.|...|. ++++++...
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            4579999996 9999999999999994 788887754

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.70  E-value=0.0043  Score=55.80  Aligned_cols=71  Identities=15%  Similarity=0.146  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a   97 (328)
                      .+|+|+|+| +|.+|..++..+.+.|++|++++.++.........    ....+|..|.+.+.++++  ++|.|+-..
T Consensus        11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad----~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         11 SATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH----RSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh----heEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            457999999 58999999999999999999999877542221111    022356667788887776  799888653

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.69  E-value=0.0083  Score=51.81  Aligned_cols=66  Identities=21%  Similarity=0.338  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|+| .|-||+.+++.|..-|++|++++|.......         .  ..+...++++++++++|+|+.+...
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~---------~--~~~~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPG---------V--QSFAGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCC---------c--eeecccccHHHHHhcCCEEEECCCC
Confidence            357999999 8999999999999999999999886543211         1  1122456789999999999998754

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.68  E-value=0.0046  Score=53.29  Aligned_cols=68  Identities=15%  Similarity=0.144  Sum_probs=53.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      |++|.|+| .|++|+-++..-...|++|++++-.+..........    ....+..|.+.++++.+++|+|-.
T Consensus         1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~~----~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVADR----VIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcccc----eeecCCCCHHHHHHHHhhCCEEEE
Confidence            47899999 599999999999999999999997766544332221    333566688999999999999854

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.67  E-value=0.003  Score=55.92  Aligned_cols=75  Identities=9%  Similarity=0.068  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...+|+|+|+ |-+|...++.|...|.+|++++|++.+.........  .....+..+.+.+.+.+.++|+||+++..
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g--~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG--GRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC--ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            3467999985 999999999999999999999998765443322110  01112334567788888999999999854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.66  E-value=0.031  Score=42.32  Aligned_cols=32  Identities=16%  Similarity=0.304  Sum_probs=28.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      +|+|.| .|.+|+.+++.|...|. ++++++...
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDT   33 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence            589999 49999999999999996 788888764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.65  E-value=0.011  Score=49.06  Aligned_cols=97  Identities=21%  Similarity=0.246  Sum_probs=61.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+|||+|||+ =|+.|++.|.+.|+ |++.+-.+.......+...........+-+.+.+.+.++  +++.||+..... 
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPf-   77 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPF-   77 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCch-
Confidence            7999999986 59999999999998 554444433322221110000011112337888888885  899999997641 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEE
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  140 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  140 (328)
                                     -...++++.++|++  .++..+-|
T Consensus        78 ---------------A~~is~na~~a~~~--~~ipylR~   99 (249)
T PF02571_consen   78 ---------------AAEISQNAIEACRE--LGIPYLRF   99 (249)
T ss_pred             ---------------HHHHHHHHHHHHhh--cCcceEEE
Confidence                           12346788899998  56665443

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.63  E-value=0.018  Score=50.73  Aligned_cols=35  Identities=17%  Similarity=0.300  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      ...+|+|.| .|.+|+++++.|...|. ++++++...
T Consensus        27 ~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            456999999 59999999999999995 788888864

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.62  E-value=0.0033  Score=54.23  Aligned_cols=75  Identities=23%  Similarity=0.292  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCh-hhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~vi~~a~~   99 (328)
                      +++||++| +||+.+.++..|.+++ .+|++.+|...+..++..... ..-+.+|+.+.+ .+++..+..|.|+.+.-.
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~-~~av~ldv~~~~~~L~~~v~~~D~viSLlP~   78 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGIN-IKAVSLDVADEELALRKEVKPLDLVISLLPY   78 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCC-ccceEEEccchHHHHHhhhcccceeeeeccc
Confidence            56899999 7999999999999875 799999998877766655333 224468999988 889999999999999754

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.62  E-value=0.01  Score=52.15  Aligned_cols=74  Identities=22%  Similarity=0.150  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCChhhH----hhc-CCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWR----DCI-QGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~----~~~-~~~d~vi~   95 (328)
                      ...+|+|+||+|.+|..+++.+...|.+|+++++++.+...... .+.   ..-++..+.+++.    +.. .++|+|++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF---DDAFNYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---ceeEEcCCcccHHHHHHHhCCCCcEEEEE
Confidence            34689999999999999999999999999998888766544332 211   1112322222222    222 37899999


Q ss_pred             CCC
Q 020254           96 LAG   98 (328)
Q Consensus        96 ~a~   98 (328)
                      +.|
T Consensus       228 ~~g  230 (338)
T cd08295         228 NVG  230 (338)
T ss_pred             CCC
Confidence            876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.0078  Score=51.03  Aligned_cols=56  Identities=14%  Similarity=0.271  Sum_probs=45.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|+|+|++|.+|+.++..|++.|..|+++.|+.                       .++.+.++++|+||++.|.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------hhHHHHhccCCEEEEccCC
Confidence            4567999999999999999999999999999887621                       1345566889999999874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.62  E-value=0.0029  Score=53.65  Aligned_cols=73  Identities=18%  Similarity=0.170  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      .++++|+|+ |.+|++++..|++.|++|++++|+..+...+......  ...+...+.++  ..+.++|+||++.+..
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~--~~~~~~DivInatp~g  189 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR--YGEIQAFSMDE--LPLHRVDLIINATSAG  189 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--cCceEEechhh--hcccCccEEEECCCCC
Confidence            568999997 8999999999999999999999987655443221100  00011111111  2235799999998763

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.61  E-value=0.0069  Score=52.83  Aligned_cols=74  Identities=16%  Similarity=0.069  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a   97 (328)
                      ..+|||+||+|.+|..+++.+...|.+|+++++++.+.......+.   -.-+|..+.+.+.+.+     .++|+|+++.
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~  215 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGF---DVAFNYKTVKSLEETLKKASPDGYDCYFDNV  215 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeccccccHHHHHHHhCCCCeEEEEECC
Confidence            4689999999999999999998899999999888765544433221   0112332222232222     2689999997


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      |.
T Consensus       216 G~  217 (325)
T TIGR02825       216 GG  217 (325)
T ss_pred             CH
Confidence            63

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.58  E-value=0.0023  Score=54.87  Aligned_cols=64  Identities=16%  Similarity=0.236  Sum_probs=47.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|.|+| .|.+|..+++.|++.|++|++.+|++.+........         ....++..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g---------~~~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAG---------AVTAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC---------CcccCCHHHHHhcCCEEEEecC
Confidence            478898 799999999999999999999999876654433221         1122345567778999998864

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.58  E-value=0.015  Score=50.01  Aligned_cols=108  Identities=19%  Similarity=0.218  Sum_probs=70.2

Q ss_pred             EEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           28 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        28 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      |.| +|.+|+.++..|+..+.  ++.+++++..............   ....+.+.. .+ .+.++++|+||.+||.+..
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~-~~~~~daDivVitag~~rk   77 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS-GD-YSDCKDADLVVITAGAPQK   77 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec-CC-HHHHCCCCEEEECCCCCCC
Confidence            456 59999999999988774  7999998765432221111000   011233332 22 3677899999999997522


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                         ...+..+.+..|..-.+.+.+.+.+  .+.+.++.+-|
T Consensus        78 ---~g~~R~dll~~N~~i~~~~~~~i~~--~~p~~~vivvs  113 (299)
T TIGR01771        78 ---PGETRLELVGRNVRIMKSIVPEVVK--SGFDGIFLVAT  113 (299)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEeC
Confidence               2345678899999999999999998  44444444433

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.55  E-value=0.012  Score=50.45  Aligned_cols=38  Identities=21%  Similarity=0.232  Sum_probs=33.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   61 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   61 (328)
                      .++|.|+| +|.+|..++..|+..|++|+++++++....
T Consensus         4 ~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (292)
T PRK07530          4 IKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLE   41 (292)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            46899999 599999999999999999999999876543

>PLN02688 pyrroline-5-carboxylate reductase

Probab=96.51  E-value=0.0079  Score=50.88  Aligned_cols=64  Identities=14%  Similarity=0.260  Sum_probs=46.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC----eEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH----QVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |+|.++| .|-+|.++++.|++.|+    +|++. +|++.+.......       ++...  ++..++++++|+||.+.
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~-------g~~~~--~~~~e~~~~aDvVil~v   69 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSL-------GVKTA--ASNTEVVKSSDVIILAV   69 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHc-------CCEEe--CChHHHHhcCCEEEEEE
Confidence            6899999 89999999999999998    88888 7776554333221       12222  23445567899999996

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.51  E-value=0.0061  Score=48.66  Aligned_cols=28  Identities=29%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVR   51 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~   51 (328)
                      |+|.|.||+|.+|+.+++.|.+.||.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            6899999999999999999999999986

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.50  E-value=0.0063  Score=59.67  Aligned_cols=163  Identities=17%  Similarity=0.127  Sum_probs=99.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCccc-------ccCCCCCccccCceeecCChhhHhhcC-----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      ..+..+|+||-|..|-.|+++|.++|.+ ++..+|+.-+..       .+...+.+.....-|++..+....++.     
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence            3468999999999999999999999964 555566654321       111221100011122333333333332     


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                       -+--|||+|++..+   .+...++.+++-+.-+.++.++=...++.-...+.||.+||.+.+ .|...          .
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscG-RGN~G----------Q 1915 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCG-RGNAG----------Q 1915 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeeccc-CCCCc----------c
Confidence             45778999886433   234455566666666777777766655532345789999998764 44221          2


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceE
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIV  196 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v  196 (328)
                      ..| .+..++|.+++..+. .|++-+.+.-|.|
T Consensus      1916 tNYG~aNS~MERiceqRr~-~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRH-EGFPGTAIQWGAI 1947 (2376)
T ss_pred             cccchhhHHHHHHHHHhhh-cCCCcceeeeecc
Confidence            346 777888999887776 4777666665544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.46  E-value=0.0068  Score=52.88  Aligned_cols=71  Identities=27%  Similarity=0.336  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc---CCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vi~~a~~   99 (328)
                      ..+|+|+||+|.+|..+++.+...|.+|+++++++...........      -++.+.+.+.+.+   .++|+|+++++.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~d~v~~~~g~  236 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGA------DYVIDGSKFSEDVKKLGGADVVIELVGS  236 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCC------cEEEecHHHHHHHHhccCCCEEEECCCh
Confidence            4589999999999999999999999999999987655433322110      1222222222222   279999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08223 hypothetical protein; Validated

Probab=96.45  E-value=0.043  Score=46.37  Aligned_cols=104  Identities=11%  Similarity=0.047  Sum_probs=62.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC----c----------------cccCceeec-
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK----T----------------RFFPGVMIA-   78 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~----~----------------~~~~~~d~~-   78 (328)
                      ....+|+|.| .|.+|+.+++.|...|. +++++|.+.-....+..+..    .                .....++.. 
T Consensus        25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            3456899999 69999999999999994 78888876433322221110    0                001111111 


Q ss_pred             ---CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc
Q 020254           79 ---EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  144 (328)
Q Consensus        79 ---~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~  144 (328)
                         +.+.+.++++++|+|+.+.-.     +           +...-..+-++|.+  .+ ..+|+-+..
T Consensus       104 ~~l~~~n~~~ll~~~DlVvD~~D~-----~-----------~~~~r~~ln~~c~~--~~-iP~V~~~~~  153 (287)
T PRK08223        104 EGIGKENADAFLDGVDVYVDGLDF-----F-----------EFDARRLVFAACQQ--RG-IPALTAAPL  153 (287)
T ss_pred             cccCccCHHHHHhCCCEEEECCCC-----C-----------cHHHHHHHHHHHHH--cC-CCEEEEecc
Confidence               455677788899999977421     0           01223355677887  34 466666543

>PLN02256 arogenate dehydrogenase

Probab=96.45  E-value=0.0061  Score=52.42  Aligned_cols=67  Identities=19%  Similarity=0.225  Sum_probs=46.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-CCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~   98 (328)
                      ..+|+|.|+| .|.+|+.+++.|.+.|++|++++++...  .....     . ++.  ...+.++++ .++|+||.+.-
T Consensus        34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~--~~a~~-----~-gv~--~~~~~~e~~~~~aDvVilavp  101 (304)
T PLN02256         34 SRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYS--DIAAE-----L-GVS--FFRDPDDFCEEHPDVVLLCTS  101 (304)
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHH--HHHHH-----c-CCe--eeCCHHHHhhCCCCEEEEecC
Confidence            4567999999 7999999999999999999999988532  11111     0 111  123344444 46899999864

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.44  E-value=0.024  Score=47.94  Aligned_cols=69  Identities=23%  Similarity=0.322  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC--hhh-HhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE--PQW-RDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~~~d~vi~~a~   98 (328)
                      ++|+|+|.| .|.+|+.+++.|.+.|+.+.+++++.+........       ..++.|.  ++. ......+|+||-+.-
T Consensus         2 ~~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~-------~lgv~d~~~~~~~~~~~~~aD~VivavP   73 (279)
T COG0287           2 ASMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAAL-------ELGVIDELTVAGLAEAAAEADLVIVAVP   73 (279)
T ss_pred             CCcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHh-------hcCcccccccchhhhhcccCCEEEEecc
Confidence            356788888 89999999999999999998888877654332221       1333332  222 455567999999864

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.44  E-value=0.0092  Score=48.06  Aligned_cols=70  Identities=13%  Similarity=0.104  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++|+|+|| |-+|...++.|++.|++|+++++...+. .......      .+.+.....-...+.++|.||-+.+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~------~i~~~~~~~~~~~l~~adlViaaT~   79 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEG------KIRWKQKEFEPSDIVDAFLVIAATN   79 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCC------CEEEEecCCChhhcCCceEEEEcCC
Confidence            4579999996 9999999999999999999997654322 1111111      1233222222345678999888765

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.44  E-value=0.016  Score=52.31  Aligned_cols=74  Identities=15%  Similarity=0.236  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc---------cCceeecCChhhHhhcCCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF---------FPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      .+|+|.|.| .|++|..++..|.+ ||+|+++++++.+...+........         ...+-+++.   .+.++++|+
T Consensus         5 ~~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~---~~~~~~adv   79 (425)
T PRK15182          5 DEVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSE---IEKIKECNF   79 (425)
T ss_pred             CCCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeC---HHHHcCCCE
Confidence            458999998 89999999999877 6999999999887666552111000         000111111   234678999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      +|-|.+.+
T Consensus        80 vii~Vptp   87 (425)
T PRK15182         80 YIITVPTP   87 (425)
T ss_pred             EEEEcCCC
Confidence            99998754

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=96.43  E-value=0.015  Score=50.24  Aligned_cols=34  Identities=29%  Similarity=0.511  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      |+|+|+| +|.+|..++..|.+.|++|++++| ++.
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~   34 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKR   34 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHH
Confidence            6899999 699999999999999999999999 443

>PLN02775 Probable dihydrodipicolinate reductase

Probab=96.43  E-value=0.067  Score=45.06  Aligned_cols=77  Identities=13%  Similarity=0.109  Sum_probs=49.0

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhc-----CCCc
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGST   91 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d   91 (328)
                      +.+.+.++|+|.|++|..|+.+++.+.+.+.++++..-......... ...    ...+.+..++++++.+     +.+|
T Consensus         6 ~~~~~~i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~----g~~v~~~~~~dl~~~l~~~~~~~~~   81 (286)
T PLN02775          6 SPPGSAIPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVC----GVEVRLVGPSEREAVLSSVKAEYPN   81 (286)
T ss_pred             CCcCCCCeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceec----cceeeeecCccHHHHHHHhhccCCC
Confidence            33445579999999999999999999998888776433222211111 100    1134454456666665     2589


Q ss_pred             -EEEECCC
Q 020254           92 -AVVNLAG   98 (328)
Q Consensus        92 -~vi~~a~   98 (328)
                       ++|.+..
T Consensus        82 ~VvIDFT~   89 (286)
T PLN02775         82 LIVVDYTL   89 (286)
T ss_pred             EEEEECCC
Confidence             8999854

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.43  E-value=0.009  Score=54.52  Aligned_cols=41  Identities=17%  Similarity=0.361  Sum_probs=36.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF   64 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   64 (328)
                      |++|.|+| .|-.|..+++.|+++||+|++.+|++++...+.
T Consensus         1 ~~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~   41 (470)
T PTZ00142          1 MSDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFV   41 (470)
T ss_pred             CCEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            35899999 799999999999999999999999988765543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.43  E-value=0.036  Score=45.03  Aligned_cols=35  Identities=14%  Similarity=0.321  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      ...+|+|.| .|.+|+.+++.|...|. ++++++.+.
T Consensus        27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   62 (212)
T PRK08644         27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDV   62 (212)
T ss_pred             hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            456899999 59999999999999995 688888873

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.013  Score=49.51  Aligned_cols=57  Identities=18%  Similarity=0.333  Sum_probs=48.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ...++|+|+|.++.+|+.++..|+++|..|+++.++.                       .++.+.++++|+||.++|..
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------~~l~~~~~~ADIVIsAvg~p  212 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------KDMASYLKDADVIVSAVGKP  212 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------hhHHHHHhhCCEEEECCCCC
Confidence            3568999999999999999999999999999887642                       24667788899999998864

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.42  E-value=0.17  Score=42.58  Aligned_cols=35  Identities=14%  Similarity=0.296  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~   57 (328)
                      ...+|+|+| .|.+|+++++.|...| -++++++.+.
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            456899999 6999999999999999 6888888764

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.42  E-value=0.027  Score=49.92  Aligned_cols=35  Identities=20%  Similarity=0.306  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      ...+|+|+| .|.+|..+++.|...|. ++++++.+.
T Consensus        40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~   75 (370)
T PRK05600         40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDT   75 (370)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            356899999 69999999999999994 888888863

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=96.40  E-value=0.014  Score=50.21  Aligned_cols=37  Identities=24%  Similarity=0.305  Sum_probs=33.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   60 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   60 (328)
                      +++|.|+| .|.+|..++..|+..|++|+++++++...
T Consensus         4 ~~~V~vIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~   40 (295)
T PLN02545          4 IKKVGVVG-AGQMGSGIAQLAAAAGMDVWLLDSDPAAL   40 (295)
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            46899999 59999999999999999999999987664

>PRK07574 formate dehydrogenase; Provisional

Probab=96.39  E-value=0.009  Score=52.96  Aligned_cols=69  Identities=19%  Similarity=0.222  Sum_probs=50.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...|+|.|+| .|-||+.+++.|..-|.+|++.+|...+......         .++.-..+++++++.+|+|+.+...
T Consensus       190 L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~---------~g~~~~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        190 LEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE---------LGLTYHVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh---------cCceecCCHHHHhhcCCEEEEcCCC
Confidence            3457999999 7999999999999999999999987632211111         1222234688899999999888754

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.39  E-value=0.015  Score=48.42  Aligned_cols=68  Identities=15%  Similarity=0.305  Sum_probs=44.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC----eEEEEecCC-CcccccCCCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSR-SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      +.|||.|+| +|.+|+.++..|++.|+    +|++..|+. .+.......     + .+...  .+..++++++|+||.+
T Consensus         3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~-~~~~~--~~~~~~~~~~DiViia   73 (245)
T PRK07634          3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQAR-----Y-NVSTT--TDWKQHVTSVDTIVLA   73 (245)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHH-----c-CcEEe--CChHHHHhcCCEEEEe
Confidence            357899999 69999999999998763    366677653 333322221     1 12222  3455667889999998


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      .-
T Consensus        74 vp   75 (245)
T PRK07634         74 MP   75 (245)
T ss_pred             cC
Confidence            64

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.38  E-value=0.015  Score=44.75  Aligned_cols=32  Identities=25%  Similarity=0.325  Sum_probs=29.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT   54 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~   54 (328)
                      ..++|+|.|| |-+|...++.|++.|++|++++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            4579999995 9999999999999999999885

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.012  Score=50.01  Aligned_cols=56  Identities=16%  Similarity=0.246  Sum_probs=47.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|.|+|.+|.+|+.++..|+++|+.|+++.|...                       ++.++.+++|+||-+.+.
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-----------------------~l~e~~~~ADIVIsavg~  212 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-----------------------DAKALCRQADIVVAAVGR  212 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-----------------------CHHHHHhcCCEEEEecCC
Confidence            35689999999999999999999999999999866432                       356677788999998875

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.36  E-value=0.013  Score=51.61  Aligned_cols=56  Identities=20%  Similarity=0.183  Sum_probs=42.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .++|.|.|.+|.+|+.+++.|.+. +++|+++++....                    .....+.+.++|+||-|+-
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------------~~~~~~~v~~aDlVilavP   60 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------------SLDPATLLQRADVLIFSAP   60 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------------cCCHHHHhcCCCEEEEeCC
Confidence            468999999999999999999975 8899999874110                    1123456678898888864

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.34  E-value=0.0064  Score=51.81  Aligned_cols=75  Identities=13%  Similarity=0.085  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCce-eecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGV-MIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+| +|..|++++..|.+.|. +|+++.|+..+...+......  ...+ .+...+++...+.++|+|||+...
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~--~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ--VGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh--cCcceeccchhhhhhcccCCCEEEECCCC
Confidence            356899999 59999999999999995 799999998766555432110  0011 111123445566789999999875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.33  E-value=0.036  Score=43.53  Aligned_cols=32  Identities=16%  Similarity=0.325  Sum_probs=28.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      +|+|.| .|.+|+.+++.|...|. ++++++.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999 59999999999999996 699988875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.32  E-value=0.0054  Score=51.72  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec-CChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +.++|.|+|+.| +|+--++....-|++|++++++..+.++.........|  +|.+ |++.++++.+-.|.++|++.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~f--v~~~~d~d~~~~~~~~~dg~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVF--VDSTEDPDIMKAIMKTTDGGIDTVS  255 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCccee--EEecCCHHHHHHHHHhhcCcceeee
Confidence            568999999988 99988888888899999999998665554443221112  5666 78888877776677776654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.31  E-value=0.0075  Score=46.10  Aligned_cols=67  Identities=18%  Similarity=0.256  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+| -|.+|+.+++.|...|.+|++..++|-+.-+-...       ++++.   .+++++...|++|-+.|.
T Consensus        22 ~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d-------Gf~v~---~~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   22 AGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMD-------GFEVM---TLEEALRDADIFVTATGN   88 (162)
T ss_dssp             TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT-------T-EEE----HHHHTTT-SEEEE-SSS
T ss_pred             CCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc-------CcEec---CHHHHHhhCCEEEECCCC
Confidence            457899999 89999999999999999999999988554332222       23443   477888999999998875

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.30  E-value=0.0084  Score=53.13  Aligned_cols=72  Identities=17%  Similarity=0.298  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|||+| .|-+|.-++++|.+.| .+|+++.|...+...+....      +.+....+.+...+..+|+||.+.+.+
T Consensus       177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~------~~~~~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL------GAEAVALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh------CCeeecHHHHHHhhhhCCEEEEecCCC
Confidence            457899999 5999999999999999 79999999988877766542      267778888999999999999998864

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.30  E-value=0.035  Score=49.69  Aligned_cols=103  Identities=14%  Similarity=0.087  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCC-------Cc-------------cccCceeec--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK-------KT-------------RFFPGVMIA--   78 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-------~~-------------~~~~~~d~~--   78 (328)
                      ...+|+|+| .|.+|..+++.|...|. ++++++...-....+..+.       ..             ....+++..  
T Consensus        41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            346899999 69999999999999995 7888776532222111110       00             001112111  


Q ss_pred             --CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           79 --EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        79 --~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                        +.+...+.++++|+||.+...                  ...-..+-++|.+  .+ .++|+.++.+.
T Consensus       120 ~i~~~~~~~~~~~~D~Vvd~~d~------------------~~~r~~ln~~~~~--~~-~p~v~~~~~g~  168 (392)
T PRK07878        120 RLDPSNAVELFSQYDLILDGTDN------------------FATRYLVNDAAVL--AG-KPYVWGSIYRF  168 (392)
T ss_pred             cCChhHHHHHHhcCCEEEECCCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeccC
Confidence              334456677889999998531                  2222245567777  33 56777766554

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.30  E-value=0.0084  Score=51.78  Aligned_cols=73  Identities=16%  Similarity=0.137  Sum_probs=45.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-cc-CceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FF-PGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|+|+|+ |-+|..++..|.+.|++|++++|++............. .. ........++.... +++|+||.+.-
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k   75 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVK   75 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEecc
Confidence            58999995 99999999999999999999999765433332211100 00 00001111223333 77899998854

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.30  E-value=0.037  Score=45.26  Aligned_cols=96  Identities=15%  Similarity=0.105  Sum_probs=62.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~   99 (328)
                      ++|+|+|+|||+- ++.|++.|...+..+++.+-.............   ....-..+.+.+.+.++  ++|.||.....
T Consensus         1 ~~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~---~~~~G~l~~e~l~~~l~e~~i~llIDATHP   76 (257)
T COG2099           1 SMMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGAKLAEQIGP---VRVGGFLGAEGLAAFLREEGIDLLIDATHP   76 (257)
T ss_pred             CCceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccccchhccCC---eeecCcCCHHHHHHHHHHcCCCEEEECCCh
Confidence            3578999999874 899999999888544444433322222111111   12235558888888885  79999998653


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEE
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV  139 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v  139 (328)
                      .                -...++|.+++|+.  .++..+.
T Consensus        77 y----------------Aa~iS~Na~~aake--~gipy~r   98 (257)
T COG2099          77 Y----------------AARISQNAARAAKE--TGIPYLR   98 (257)
T ss_pred             H----------------HHHHHHHHHHHHHH--hCCcEEE
Confidence            1                12346788999999  6666543

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=96.27  E-value=0.033  Score=47.42  Aligned_cols=56  Identities=14%  Similarity=0.188  Sum_probs=40.1

Q ss_pred             hhHHHHHHHHHhCCCeEEEEecCCCcccc-----cCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           34 FIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        34 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |=|+++++.|++.||+|++.+|+......     +...       ++...  ++..++.+++|+||-|..
T Consensus        30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~Laea-------GA~~A--aS~aEAAa~ADVVIL~LP   90 (341)
T TIGR01724        30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDA-------GVKVV--SDDKEAAKHGEIHVLFTP   90 (341)
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHC-------CCeec--CCHHHHHhCCCEEEEecC
Confidence            67999999999999999999987654321     1111       12222  345688889999999965

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.26  E-value=0.058  Score=43.28  Aligned_cols=36  Identities=11%  Similarity=0.201  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   58 (328)
                      +..+|+|.|+ |.+|.++++.|...|. ++++++...-
T Consensus        20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~v   56 (197)
T cd01492          20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTV   56 (197)
T ss_pred             HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcc
Confidence            4568999996 5599999999999995 7888887643

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06849 hypothetical protein; Provisional

Probab=96.25  E-value=0.0082  Score=53.84  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=35.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      +++|+|||||+...+|..+++.|.+.|++|++++..+..
T Consensus         2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~   40 (389)
T PRK06849          2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP   40 (389)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence            457899999999999999999999999999999888644

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.25  E-value=0.015  Score=52.14  Aligned_cols=67  Identities=21%  Similarity=0.189  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+| .|.||+.+++.|...|.+|+++++++.+.......       ++++.   .++++++++|+||.+++.
T Consensus       211 ~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-------G~~v~---~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        211 AGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-------GFRVM---TMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-------CCEec---CHHHHHhCCCEEEECCCC
Confidence            457899999 59999999999999999999999987654322221       12332   245677899999998763

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.23  E-value=0.034  Score=40.40  Aligned_cols=85  Identities=20%  Similarity=0.228  Sum_probs=50.3

Q ss_pred             CeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           24 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        24 ~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ++|.|.|+|   +..|..+++.|.+.|++|+.+.-+...            ..  ...-..++.+.-..+|.++.+... 
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~------------i~--G~~~y~sl~e~p~~iDlavv~~~~-   65 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGE------------IL--GIKCYPSLAEIPEPIDLAVVCVPP-   65 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSE------------ET--TEE-BSSGGGCSST-SEEEE-S-H-
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceE------------EC--cEEeeccccCCCCCCCEEEEEcCH-
Confidence            479999988   778999999999999999988443321            11  111233445423578998888542 


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                                        ..+..+++.|.+  .+++.+++.++
T Consensus        66 ------------------~~~~~~v~~~~~--~g~~~v~~~~g   88 (116)
T PF13380_consen   66 ------------------DKVPEIVDEAAA--LGVKAVWLQPG   88 (116)
T ss_dssp             ------------------HHHHHHHHHHHH--HT-SEEEE-TT
T ss_pred             ------------------HHHHHHHHHHHH--cCCCEEEEEcc
Confidence                              223366777776  57888777776

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.23  E-value=0.016  Score=52.51  Aligned_cols=73  Identities=12%  Similarity=0.123  Sum_probs=51.2

Q ss_pred             cCCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH
Q 020254           21 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        21 ~~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      ...++||||+|                ||..|.+|++.+..+|++|+.++-...- .  .+..    ...+++...+++.
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~p~~----v~~i~V~ta~eM~  326 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--DPQG----VKVIHVESARQML  326 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--CCCC----ceEEEecCHHHHH
Confidence            45679999976                7999999999999999999998743221 1  1110    2224555555555


Q ss_pred             hhcC---CCcEEEECCCCC
Q 020254           85 DCIQ---GSTAVVNLAGTP  100 (328)
Q Consensus        85 ~~~~---~~d~vi~~a~~~  100 (328)
                      +++.   +.|++|++|++.
T Consensus       327 ~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        327 AAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHhhCCCCEEEEecccc
Confidence            5553   479999999975

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.22  E-value=0.014  Score=49.27  Aligned_cols=65  Identities=18%  Similarity=0.329  Sum_probs=47.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|.++| .|-.|..++++|++.||.|++.+|++.+..+.. ..+       ..  -.++..++..++|+||-+..
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~G-------a~--~a~s~~eaa~~aDvVitmv~   66 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAG-------AT--VAASPAEAAAEADVVITMLP   66 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcC-------Cc--ccCCHHHHHHhCCEEEEecC
Confidence            4799999 899999999999999999999999988843332 211       11  12223566667888888764

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.22  E-value=0.038  Score=49.26  Aligned_cols=34  Identities=18%  Similarity=0.244  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS   56 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~   56 (328)
                      ...+|+|.| .|.+|++++..|...|. +++++++.
T Consensus       134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456899998 58999999999999996 78888886

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=96.21  E-value=0.0065  Score=53.46  Aligned_cols=35  Identities=34%  Similarity=0.454  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      |||+|.|+| +|.+|..++..|.+.||+|++++|++
T Consensus         1 ~~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~~   35 (341)
T PRK08229          1 MMARICVLG-AGSIGCYLGGRLAAAGADVTLIGRAR   35 (341)
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecHH
Confidence            468999999 79999999999999999999999965

>PRK07680 late competence protein ComER; Validated

Probab=96.21  E-value=0.02  Score=48.64  Aligned_cols=66  Identities=24%  Similarity=0.402  Sum_probs=46.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC----eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |+|.|+| .|-+|+.+++.|++.|+    +|++.+|++.+.......     +.++...  .+..+++.++|+||.+.
T Consensus         1 m~I~iIG-~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~-----~~g~~~~--~~~~~~~~~aDiVilav   70 (273)
T PRK07680          1 MNIGFIG-TGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKER-----YPGIHVA--KTIEEVISQSDLIFICV   70 (273)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHH-----cCCeEEE--CCHHHHHHhCCEEEEec
Confidence            5799999 79999999999999883    799999987554333221     1123332  23345567899999986

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.21  E-value=0.017  Score=50.90  Aligned_cols=73  Identities=21%  Similarity=0.162  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhc-----CCCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~   96 (328)
                      ..+|+|+||+|.+|..+++.+...|.+|+++++++.+..... ..+.   -.-+|..+.+++.+.+     .++|+|+++
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa---~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~  235 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DEAFNYKEEPDLDAALKRYFPEGIDIYFDN  235 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC---CEEEECCCcccHHHHHHHHCCCCcEEEEEC
Confidence            468999999999999999999899999998888776544332 1111   1112332222232222     268999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      .|
T Consensus       236 vG  237 (348)
T PLN03154        236 VG  237 (348)
T ss_pred             CC
Confidence            76

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.20  E-value=0.0047  Score=52.30  Aligned_cols=67  Identities=12%  Similarity=0.175  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC----eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .|+|.++| +|.+|.++++.|++.|+    +|++.+|++.+...+...     + ++...  ++..++++++|+||-+.-
T Consensus         2 ~~~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~-----~-g~~~~--~~~~e~~~~aDiIiLavk   72 (272)
T PRK12491          2 NKQIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDK-----Y-GITIT--TNNNEVANSADILILSIK   72 (272)
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHh-----c-CcEEe--CCcHHHHhhCCEEEEEeC
Confidence            46899999 79999999999999874    799988877654433221     1 12222  233455678999998853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	328
3oh8_A	516	Crystal Structure Of The Nucleoside-Diphosphate Sug		2e-46
4b4o_A	298	Crystal Structure Of Human Epimerase Family Protein		4e-36
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		4e-06
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		9e-05

>pdb|3OH8|A Chain A, Crystal Structure Of The Nucleoside-Diphosphate Sugar Epimerase From Corynebacterium Glutamicum. Northeast Structural Genomics Consortium Target Cgr91 Length = 516

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 166/306 (54%), Gaps = 19/306 (6%)
Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 81
           S +TV++TG+ G +GR L  +LQ   H+V  L R   K     PGK  RF+  +  A   
Sbjct: 146 SPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK-----PGK--RFWDPLNPAS-- 196
Query: 82  QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 141
              D + G+  +V+LAG PI  R++   K+ I+ESR+  T  + +L+ ES    + +  +
Sbjct: 197 ---DLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAES---TQCTTXI 250
Query: 142 SATALGYYGTSE-TEVFDESSPSGNDYLAEVCREWE-GTALKVNKDVRLALIRIGIVLGK 199
           SA+A+G+YG     E+  E S SG+D+LAEVCR+WE  TA   +   R+A IR G+ L  
Sbjct: 251 SASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSG 310
Query: 200 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 259
            GG L  +  LF    GG  G G  WFSWI +DD+ ++ Y A+ +    G IN  APNPV
Sbjct: 311 RGGXLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPV 370
Query: 260 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGA-FVVLEGQRVVPARAKELGFPFKYR 317
             A+    L     RP+++ +P    K +LG +GA  + L  QR  PA  + L   F+Y 
Sbjct: 371 SNADXTKILATSXHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYT 430
Query: 318 YVKDAL 323
            +  A+
Sbjct: 431 DIGAAI 436

>pdb|4B4O|A Chain A, Crystal Structure Of Human Epimerase Family Protein Sdr39u1 (Isoform2) With Nadph Length = 298

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 158/306 (51%), Gaps = 22/306 (7%)
Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           V V G TGFIG  L Q L A  H+V +++R         PG      PG +  +E     
Sbjct: 3   VLVGGGTGFIGTALTQLLNARGHEVTLVSRK--------PG------PGRITWDELA-AS 47
Query: 86  CIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
            +    A VNLAG  I     RW+   +KE+  SR+  T  +   I ++P+  +  VLV 
Sbjct: 48  GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLV- 106
Query: 143 ATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
            T + YY  S T  +DE SP G+ D+ + +  +WE  A       R  ++R G+VLG+ G
Sbjct: 107 -TGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG 165
Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 261
           GA    +  F +  GGP+GSG Q+F WIH+ D+  ++  AL      GV+NG AP+    
Sbjct: 166 GAXGHXLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATN 225
Query: 262 AEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVK 320
           AE     G  LGR +++P+P   ++AV G + A  +LEGQ+V+P R    G+ + +  + 
Sbjct: 226 AEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIXLLEGQKVIPRRTLATGYQYSFPELG 285
Query: 321 DALKAI 326
            ALK I
Sbjct: 286 AALKEI 291

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 36/314 (11%)
Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 78
           TV VTGA+GFIG  LV RL    + VR   R      + K  L  P  +T        +A
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLA 66
Query: 79  EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 138
           +E  + + I+G T V ++A TP+    S + + E+ +  I     ++     + + VR  
Sbjct: 67  DEGSFDEAIKGCTGVFHVA-TPMDFE-SKDPENEVIKPTIEGMLGIMKSC-AAAKTVRRL 123
Query: 139 VLVSATALGYYGTSETEVFDESSPSGNDYL-AEVCREW---------EGTALKVNKDVRL 188
           V  S+         +  V+DES  S  ++  A+    W         E  A K  K+  +
Sbjct: 124 VFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNI 183
Query: 189 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS------WIHLDDIVNLIYEAL 242
             I I   L   G  +   +P  ++ A  P+   +  +S      ++HLDD+ N      
Sbjct: 184 DFITIIPTLVV-GPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLF 242
Query: 243 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRV 302
            NP   G    ++ + + L      L  +L R  +   PE+ +     +G    L+    
Sbjct: 243 ENPKAEGRYICSSHDCIIL-----DLAKML-REKY---PEYNIPTEF-KGVDENLKSVCF 292
Query: 303 VPARAKELGFPFKY 316
              +  +LGF FKY
Sbjct: 293 SSKKLTDLGFEFKY 306

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 85
           + VTG  GFIG  +V +L   N  V +   S    E  F  +  R     + A++   +D
Sbjct: 4   IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE--FVNEAARLVKADLAADD--IKD 59
Query: 86  CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 145
            ++G+  V ++A  P   R  +E   EI  + +  T ++++ + ++  GV   V  S + 
Sbjct: 60  YLKGAEEVWHIAANP-DVRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTST 116
Query: 146 LGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK---------DVRLALIRIGIV 196
           +  YG ++        P+  DY       +  + L             D++  + R   V
Sbjct: 117 V--YGEAKV------IPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168
Query: 197 LGKDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 251
           +G+       +    M     P     LG+G+Q  S+I++ D V+ +   L       + 
Sbjct: 169 IGRRS-THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIF 227
Query: 252 NGTAPNPV---RLAEM-CDHLG 269
           N  + + +   R+AE+ C+ LG
Sbjct: 228 NIGSEDQIKVKRIAEIVCEELG 249

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	328
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-143
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-31
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-26
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-22
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	7e-21
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-20
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-17
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-16
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-15
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-14
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	4e-14
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	4e-13
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-12
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	8e-12
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-11
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	9e-11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-10
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-10
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-10
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	3e-10
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-10
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-10
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-09
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	6e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	7e-08
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	9e-08
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-07
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	4e-07
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	6e-07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-06
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-06
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	4e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-06
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	5e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	6e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-04
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	7e-06
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-05
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-05
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	5e-05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-04
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-04
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	6e-04
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	6e-04

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score =  413 bits (1064), Expect = e-143
 Identities = 105/314 (33%), Positives = 157/314 (50%), Gaps = 19/314 (6%)

Query: 17  HTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM 76
                S +TV++TG+ G +GR L  +LQ   H+V  L R   K    F            
Sbjct: 141 TLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLN------- 193

Query: 77  IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
                   D + G+  +V+LAG PI  R++   K+ I+ESR+  T  + +L+ ES    +
Sbjct: 194 -----PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAEST---Q 245

Query: 137 PSVLVSATALGYYGTSET-EVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIG 194
            + ++SA+A+G+YG     E+  E S SG+D+LAEVCR+WE      +    R+A IR G
Sbjct: 246 CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTG 305

Query: 195 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 254
           + L   GG L  +  LF    GG  G G  WFSWI +DD+ ++ Y A+ +    G IN  
Sbjct: 306 VALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAV 365

Query: 255 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEGQRVVPARAKELGF 312
           APNPV  A+M   L   + RP+++ +P    K +LG      + L  QR  PA  + L  
Sbjct: 366 APNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSH 425

Query: 313 PFKYRYVKDALKAI 326
            F+Y  +  A+   
Sbjct: 426 TFRYTDIGAAIAHE 439

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score =  117 bits (296), Expect = 3e-31
 Identities = 48/312 (15%), Positives = 92/312 (29%), Gaps = 43/312 (13%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 81
           S   + + G  G +G  L +RL A  H+V  L RS                  +     P
Sbjct: 2   SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQ-------TLIADVTRP 53

Query: 82  Q-WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
                 +     ++           S    +  + S +      +  +  +P  ++    
Sbjct: 54  DTLASIVHLRPEILVYCVAA-----SEYSDEHYRLSYVEGLRNTLSALEGAP--LQHVFF 106

Query: 141 VSATALGYYGTSETEVFDESSP-SGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 199
           VS+T  G YG    E  DE +P    D+  +   E E      +  +    +R   + G 
Sbjct: 107 VSST--GVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAAYSSTI----LRFSGIYGP 160

Query: 200 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY---RGVINGTAP 256
               + +              +   W + IH DD    I   +   S+     +   T  
Sbjct: 161 GRLRMIRQA-----QTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN 215

Query: 257 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 316
            P+ + ++   L +  G                          +++  AR    G+   Y
Sbjct: 216 QPLPVHDLLRWLADRQGIAYPAGATPPV------------QGNKKLSNARLLASGYQLIY 263

Query: 317 RYVKDALKAIMS 328
                   A+++
Sbjct: 264 PDYVSGYGALLA 275

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score =  104 bits (260), Expect = 3e-26
 Identities = 65/310 (20%), Positives = 108/310 (34%), Gaps = 34/310 (10%)

Query: 21  ASQMT--VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA 78
           ++ MT  +   G  G+  R L + L     ++   +R+  + E I          G    
Sbjct: 1   SNAMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-------GAEPL 52

Query: 79  EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 138
             P     + G T ++       G                 V + + D I       R  
Sbjct: 53  LWPGEEPSLDGVTHLLISTAPDSGGD--------------PVLAALGDQIAARAAQFRWV 98

Query: 139 VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLG 198
             +S T    YG  +    DE++P          R       +   ++ L + R+  + G
Sbjct: 99  GYLSTT--AVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYG 156

Query: 199 KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNP 258
              G  +K+    +     P     Q FS IH++DI  ++  +++ P    V N     P
Sbjct: 157 PGRGPFSKLGKGGIRRIIKP----GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEP 212

Query: 259 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAK-ELGFPFKY 316
           V   ++  +   + G P  LP      KA L   A     E +RV   R K ELG   KY
Sbjct: 213 VPPQDVIAYAAELQGLP--LPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKY 270

Query: 317 RYVKDALKAI 326
              +  L+A+
Sbjct: 271 PNYRVGLEAL 280

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 95.4 bits (238), Expect = 1e-22
 Identities = 42/285 (14%), Positives = 98/285 (34%), Gaps = 31/285 (10%)

Query: 18  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 77
           ++  + +  +V GATG +G    + ++A  H + ++ R  S+ +      +        +
Sbjct: 8   SRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPECRVA-EM 65

Query: 78  AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 137
            +       ++G   V+  AG            +E   S +  T+       ++   V  
Sbjct: 66  LDHAGLERALRGLDGVIFSAGY---YPSRPRRWQEEVASALGQTNPFYAACLQA--RVPR 120

Query: 138 SVLVS-ATALGYYG----TSETEVFDESSPSGNDY-----LAEVCRE-WEGTALKVNKDV 186
            + V  A A+  +       E   +D      + Y       +   +  E         +
Sbjct: 121 ILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD--EQAREQAR----NGL 174

Query: 187 RLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 245
            + +   G+VLG  D G     + +  +  G          + I   +    +  AL   
Sbjct: 175 PVVIGIPGMVLGELDIGPTTGRV-ITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG 233

Query: 246 SYRG--VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAV 288
                 ++ G   + + +A++   +  +LG+P+  P+     +A+
Sbjct: 234 RIGERYLLTG---HNLEMADLTRRIAELLGQPAPQPMSMAMARAL 275

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 88.5 bits (219), Expect = 7e-21
 Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 23/228 (10%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M ++V GATG  G  +V   +   H+V  + R   KA      +       ++       
Sbjct: 1   MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA----ADRLGATVATLVKEPLVLT 56

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
              +    AVV+    P G+              +   + +V L+  S        ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRG--------YLHLDFATHLVSLLRNS--DTLAVFILGS 106

Query: 144 TALGYYGTSETEVFDESSPSGND--YLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
            +L   G     + D    + +   Y   + + +E   L++N +V    I          
Sbjct: 107 ASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP 166

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 249
                            L  G+   S I   ++   I + L +P+   
Sbjct: 167 ATSYV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR 207

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 86.3 bits (214), Expect = 5e-20
 Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 18/229 (7%)

Query: 21  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 80
                + + GA+GF+G  L+        +V  + R   K ++       +      ++  
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKAD-VSSL 58

Query: 81  PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
            +  +  +G+ AV++                +I +  I+V   ++D + ++  GV   ++
Sbjct: 59  DEVCEVCKGADAVISAFNPGWN-------NPDIYDETIKVYLTIIDGVKKA--GVNRFLM 109

Query: 141 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKD 200
           V      +       +     P       +   E+    L   K++          +   
Sbjct: 110 VGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR-P 168

Query: 201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 249
           G    +            +       S I ++D    + + L +P +  
Sbjct: 169 GVRTGRYR-----LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQ 212

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 78.5 bits (193), Expect = 3e-17
 Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 25/228 (10%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + + GATG  G R+++  +   H+V  + R+  K               +        
Sbjct: 1   MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINI-----LQKDIFDLT 55

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
              +     VV+  G             +  E  +     ++ ++N +       ++V  
Sbjct: 56  LSDLSDQNVVVDAYGIS----------PDEAEKHVTSLDHLISVLNGT--VSPRLLVVGG 103

Query: 144 TALGYYGTSETEVFDESSPSGNDYL--AEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
            A          + +        Y   A    +          +     I    +    G
Sbjct: 104 AASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE-PG 162

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 249
                          G  G+     S+I ++D    + + +  P++  
Sbjct: 163 ERTGDYQIGKDHLLFGSDGN-----SFISMEDYAIAVLDEIERPNHLN 205

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 32/237 (13%), Positives = 81/237 (34%), Gaps = 38/237 (16%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 83
           M + + G+TG +G+ L++ L   ++Q+    R   +          +     +     + 
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEM 57

Query: 84  RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 143
              + G  A++N++G+           K + +  +    K++    ++   V+  +L+S 
Sbjct: 58  AKQLHGMDAIINVSGSG---------GKSLLKVDLYGAVKLMQAAEKA--EVKRFILLST 106

Query: 144 TALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA 203
                        FD      + Y+A+   +     L    ++   +I+ G +  ++   
Sbjct: 107 IFSLQPEKWIGAGFD---ALKDYYIAKHFAD---LYLTKETNLDYTIIQPGALTEEEA-- 158

Query: 204 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG----VINGTAP 256
                        G +    +  +   + D+ + I E +      G    + NG   
Sbjct: 159 ------------TGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTA 203

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 45/269 (16%), Positives = 86/269 (31%), Gaps = 58/269 (21%)

Query: 14  TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP 73
           +         M V V GA G + R L+  L+   H+   + R+  +   +     +    
Sbjct: 12  SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVV 71

Query: 74  GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV----TSKVVDLIN 129
                 E  +        AVV  AG+   T           +  I +      K +    
Sbjct: 72  A---NLEEDFSHAFASIDAVVFAAGSGPHTG---------ADKTILIDLWGAIKTIQEAE 119

Query: 130 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYL-----AEVCREWEGTALKVNK 184
           +   G++  ++VS  ++G      T   D+   +   YL     A+         LK   
Sbjct: 120 KR--GIKRFIMVS--SVG------TVDPDQGPMNMRHYLVAKRLAD-------DELK-RS 161

Query: 185 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 244
            +   ++R G +  ++      +                +    I   D+  +I E +  
Sbjct: 162 SLDYTIVRPGPLSNEESTGKVTVS-----------PHFSEITRSITRHDVAKVIAELVDQ 210

Query: 245 PSYRG----VINGTAPNPVRLAEMCDHLG 269
               G    V+NG  P    +A++ + LG
Sbjct: 211 QHTIGKTFEVLNGDTP----IAKVVEQLG 235

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 72.2 bits (177), Expect = 8e-15
 Identities = 43/270 (15%), Positives = 83/270 (30%), Gaps = 35/270 (12%)

Query: 21  ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIA 78
           A+  TV VTGA+G  G+ + ++L+  +     + L RS    E I             I 
Sbjct: 2   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD---IT 58

Query: 79  EEPQWRDCIQGSTAVVNLAGTPIGTRWS---SEIKKEIKESRIRVTSKVVD------LIN 129
           +        QG  A+V L       +     ++  +           + VD       I+
Sbjct: 59  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query: 130 ESPE-GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRL 188
            +   GV+  V+V   ++G            +     + L    +      L  +     
Sbjct: 119 AAKVAGVKHIVVVG--SMG----GTNPDHPLNKLGNGNILVW--KRKAEQYLA-DSGTPY 169

Query: 189 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 248
            +IR G +L K+GG    ++            +       +   D+  +  +AL     +
Sbjct: 170 TIIRAGGLLDKEGGVRELLVGKDDELLQTDTKT-------VPRADVAEVCIQALLFEEAK 222

Query: 249 G----VINGTAPNPVRLAEMCDHLGNVLGR 274
                + +          +       V  R
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 72.1 bits (176), Expect = 2e-14
 Identities = 43/288 (14%), Positives = 87/288 (30%), Gaps = 38/288 (13%)

Query: 28  VTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 82
           + G TG IG  L + L   +      +V  + R    A          +     I++   
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA--WHEDNPINYVQCD-ISDPDD 62

Query: 83  WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
            +  +   T V ++         S+E  +E  E+  ++   V+D +  +   ++  + + 
Sbjct: 63  SQAKLSPLTDVTHVFYV-TWANRSTE--QENCEANSKMFRNVLDAVIPNCPNLK-HISLQ 118

Query: 143 ATALGYYGTSETEV--------FDESSP---SGNDYLAEVCREWEGTALKVNKDVRLALI 191
                Y G  E+          + E  P     N Y        E       + +  ++ 
Sbjct: 119 TGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVE--KKEGLTWSVH 176

Query: 192 RIGIVLGKDGGALAKMIPLFMMFA------GGPL---GSGQQWFSWIHLDDIVNLIYE-- 240
           R G + G    ++  ++    ++A      G  L   G    W  +    D   +     
Sbjct: 177 RPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHI 236

Query: 241 -ALSNPSYRG-VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK 286
            A  +P  +    N +  +  +       L    G           LK
Sbjct: 237 WAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLK 284

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 71.1 bits (175), Expect = 4e-14
 Identities = 60/326 (18%), Positives = 115/326 (35%), Gaps = 59/326 (18%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTR--FFPGVM 76
            V VTG TGF+G  +++ L  + + V    R+  + +         PG   +  FF    
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD- 61

Query: 77  IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
           ++    +   I+G   + + A +PI     SE ++ + +  +     ++     S   V+
Sbjct: 62  LSNPDSFAAAIEGCVGIFHTA-SPIDFA-VSEPEEIVTKRTVDGALGILKACVNSK-TVK 118

Query: 137 PSVLVSATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEGTAL 180
             +  S+ +   +   + +V DES            P G +Y     LAE  +      L
Sbjct: 119 RFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAE--KA----VL 172

Query: 181 KVNKDVRLALIRI--GIVLGKDGGALAKMIP-----LFMMFAGGPLGSGQQWFSWIHLDD 233
           +  +   + ++ +    ++   G  +   +P       ++  G     G   F  +H+DD
Sbjct: 173 EFGEQNGIDVVTLILPFIV---GRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDD 229

Query: 234 IVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG 290
           +       L N        G    +P  V + EM   L            PE+ +  V  
Sbjct: 230 VARAHIYLLENSV----PGGRYNCSPFIVPIEEMSQLLSAKY--------PEYQILTVDE 277

Query: 291 EGAFVVLEGQRVVPARAKELGFPFKY 316
                      +   +  + GF FKY
Sbjct: 278 LKEIKGARLPDLNTKKLVDAGFDFKY 303

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 48/273 (17%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI-AEEPQ 82
           + ++VTG TGF+G+ +V+ ++ D +   +LTRS          K    +   +       
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-------NKAINDYEYRVSDYTLED 55

Query: 83  WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVL 140
             + +    AVV+LA T  G++        I E       T  + D   E+   +   V 
Sbjct: 56  LINQLNDVDAVVHLAATR-GSQGK------ISEFHDNEILTQNLYDACYEN--NISNIVY 106

Query: 141 VSATALGYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLA 189
            S  +   Y    +  ++E                 +++  +            K + + 
Sbjct: 107 ASTISA--YSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSR--------KKGLCIK 156

Query: 190 LIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSN 244
            +R   + G        MI  F    F G  L    +      +++  D    +  AL  
Sbjct: 157 NLRFAHLYGF-NEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQ 215

Query: 245 PSYRGVIN-GTAPNPVRLAEMCDHLGNVLGRPS 276
               G  N G+  + +   E+ + + N  G   
Sbjct: 216 EKVSGTFNIGSG-DALTNYEVANTINNAFGNKD 247

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---- 77
           +   +++ GATG  G   + +     ++V VL R  S+     P           +    
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-------RPAHVVVGD 54

Query: 78  AEEPQW-RDCIQGSTAVVNLAGTP 100
             +       + G  AV+ L GT 
Sbjct: 55  VLQAADVDKTVAGQDAVIVLLGTR 78

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 63.3 bits (154), Expect = 8e-12
 Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 27/231 (11%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 81
              +V + GA+G  GR L++ +       +V    R K        K      V   +  
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 76

Query: 82  QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 141
            +    QG           +GT       +           K  +L      G +   L+
Sbjct: 77  DYASAFQGHDVGFCC----LGTTRGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLL 130

Query: 142 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
           S+      G  ++        S   YL +V  E E    ++  D R ++ R G++L    
Sbjct: 131 SS-----KGADKS--------SNFLYL-QVKGEVEAKVEELKFD-RYSVFRPGVLLCDRQ 175

Query: 202 G--ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 250
                  ++  F         SG      + +  +V  +   +  P  + +
Sbjct: 176 ESRPGEWLVRKFFGSLPDSWASGH----SVPVVTVVRAMLNNVVRPRDKQM 222

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 69/324 (21%), Positives = 114/324 (35%), Gaps = 56/324 (17%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTR--FFPGVMI 77
           TV VTGA+GFIG  LV RL    + VR   R  +  + +      P  +T    +    +
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD-L 65

Query: 78  AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 137
           A+E  + + I+G T V ++A TP+    S + + E+ +  I     ++     +   VR 
Sbjct: 66  ADEGSFDEAIKGCTGVFHVA-TPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAK-TVRR 122

Query: 138 SVLVSATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEGTALK 181
            V  S+         +  V+DES             +   Y     LAE  +     A K
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAE--QA----AWK 176

Query: 182 VNKDVRLALIRI--GIVLG----KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 235
             K+  +  I I   +V+G               L  +       S  +   ++HLDD+ 
Sbjct: 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITA-LSPITGNEAHYSIIRQGQFVHLDDLC 235

Query: 236 NLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG 292
           N       NP       G    + +   + ++   L      P    +P           
Sbjct: 236 NAHIYLFENPK----AEGRYICSSHDCIILDLAKMLREKY--PE-YNIPTEFKGVDENLK 288

Query: 293 AFVVLEGQRVVPARAKELGFPFKY 316
           +            +  +LGF FKY
Sbjct: 289 SV------CFSSKKLTDLGFEFKY 306

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 60.4 bits (147), Expect = 9e-11
 Identities = 46/243 (18%), Positives = 74/243 (30%), Gaps = 54/243 (22%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 87
           VTGA G +GR + +RL      +R+   S         G          +A+       +
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----AGPNEECVQC-DLADANAVNAMV 62

Query: 88  QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS-ATAL 146
            G   +V+L G  +   +      +I +  I     + +       G    V  S    +
Sbjct: 63  AGCDGIVHLGGISVEKPFE-----QILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTI 115

Query: 147 GYYGTSETEVFDESSP-----------SGNDYLAEVCREWEGTALKVNKDVRLALIRIGI 195
           GYY   +TE      P              + LA +  +  G           AL+RIG 
Sbjct: 116 GYYP--QTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFG--------QETALVRIGS 165

Query: 196 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGT 254
                                    + +   +W   DD V+LI      P     V+ G 
Sbjct: 166 CT-------------------PEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGA 206

Query: 255 APN 257
           + N
Sbjct: 207 SAN 209

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 60.3 bits (146), Expect = 1e-10
 Identities = 46/296 (15%), Positives = 88/296 (29%), Gaps = 61/296 (20%)

Query: 21  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI- 77
            S+  + + GATG+IGR + +      H   +L R  + +      +    F   G  I 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 78  ----AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 133
                +     + ++    V++  G+                 +I     ++  I E   
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSL----------------QIESQVNIIKAIKEV-- 103

Query: 134 GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLAL--- 190
           G       S                     GND       E   +  +V   VR A+   
Sbjct: 104 GTVKRFFPSE-------------------FGNDVDNVHAVEPAKSVFEVKAKVRRAIEAE 144

Query: 191 ------IRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA 241
                 +      G    +LA+               LG G     ++  +DI     +A
Sbjct: 145 GIPYTYVSSNCFAGYFLRSLAQ--AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA 202

Query: 242 LSNPSY--RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 294
           + +P    + +      N + L E+       + +      VPE  +  ++ +  F
Sbjct: 203 VDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 258

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 58/342 (16%), Positives = 108/342 (31%), Gaps = 71/342 (20%)

Query: 18  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKT-RF 71
                + T  V G TGF+   LV+ L    + V    R     + +            + 
Sbjct: 4   QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKI 63

Query: 72  FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 131
           F    + +E  +   I G   V ++A TP+    S + + ++ +  I+    V+     +
Sbjct: 64  FRAD-LTDELSFEAPIAGCDFVFHVA-TPVHFA-SEDPENDMIKPAIQGVVNVMKACTRA 120

Query: 132 PEGVRPSVLVS--ATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCR 173
              V+  +L S  A            V DE +           P    Y     LAE  +
Sbjct: 121 K-SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE--K 177

Query: 174 EWEGTALKVNKDVRLALIRI--GIVLG----KDGGALAKMI--------PLFMMFAGGPL 219
                A K  ++  + LI +   ++ G     D  +   +          L     G  +
Sbjct: 178 A----AWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQM 233

Query: 220 GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPS 276
            SG    S  H++D+           S     +G          + E+   L        
Sbjct: 234 LSG--SVSIAHVEDVCRAHIFVAEKES----ASGRYICCAANTSVPELAKFLSKRY---- 283

Query: 277 WLPVPEFALKAVLGEGAFVVLEGQRVVPA--RAKELGFPFKY 316
               P++ +    G+         +++ +  +  + GF FKY
Sbjct: 284 ----PQYKVPTDFGD----FPPKSKLIISSEKLVKEGFSFKY 317

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 50/270 (18%), Positives = 89/270 (32%), Gaps = 53/270 (19%)

Query: 24  MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 82
           M + +TGA GF+G+ L   L +  +H +  + R   + EL                    
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEEL-------------------- 40

Query: 83  WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
               +  +  +V+LAG         E  KE     +     V+D++  +    +P++L+S
Sbjct: 41  -ESALLKADFIVHLAGVN-----RPEHDKEFSLGNVSYLDHVLDILTRN--TKKPAILLS 92

Query: 143 ATALGYYGTSETEVFDESSPSGND-YLAE-VCREWEGTALKVNKDVRLALIRIGIVLGKD 200
                    S      + +P G      E + RE+            + + R   + GK 
Sbjct: 93  ---------SSI-QATQDNPYGESKLQGEQLLREYAE-----EYGNTVYIYRWPNLFGKW 137

Query: 201 G-GALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYR--GVING 253
                  +I  F   +     +         +  ++DDIV  I  A+        GV   
Sbjct: 138 CKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV 197

Query: 254 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEF 283
                V L E+ D L           +P+ 
Sbjct: 198 PNVFKVTLGEIVDLLYKFKQSRLDRTLPKL 227

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 51/294 (17%), Positives = 92/294 (31%), Gaps = 45/294 (15%)

Query: 17  HTQKASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR-SRSKAELIFPGKKTRFFPG 74
           +  K +   V V G  GF+G  LV+RL     +QV V+     ++   +      RF   
Sbjct: 26  NASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSET 85

Query: 75  VMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESP 132
             I ++            V +LA    G + S  I   + +       T K+ + +    
Sbjct: 86  -SITDDALLASLQDEYDYVFHLAT-YHGNQSS--IHDPLADHENNTLTTLKLYERLKHF- 140

Query: 133 EGVRPSVLVSATALGYYGT-----SETEVFDESSPSGND-------YLAEV-CREWEGTA 179
           + ++  V  +A               TE  D  S   ND          E     +    
Sbjct: 141 KRLKKVVYSAAGCS-IAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 180 LKVNKDVRLALIRI------------GIVLGKDGGALAKMIPLFM--MFAGGPL---GSG 222
                 +     R             G   G        + P F+     G PL     G
Sbjct: 200 -----QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGG 254

Query: 223 QQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 276
                +I ++D+ N +    ++ +  GV N  +     +A++   +  + G  +
Sbjct: 255 VATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNT 308

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 30/238 (12%), Positives = 65/238 (27%), Gaps = 46/238 (19%)

Query: 15  SDHTQKASQMTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFP 73
            +   +     V + GA G I R ++ +L      +  +  R  +K    +P        
Sbjct: 15  ENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------T 67

Query: 74  GVMIAE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI 128
              I           +  +QG   V                     E      + V+  +
Sbjct: 68  NSQIIMGDVLNHAALKQAMQGQDIVYANLTG---------------EDLDIQANSVIAAM 112

Query: 129 NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRL 188
                 V+  + V   +LG Y     +  + ++    + L    R     A++    +  
Sbjct: 113 KAC--DVKRLIFVL--SLGIYDEVPGKFVEWNNAVIGEPLKPF-RRAA-DAIE-ASGLEY 165

Query: 189 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 246
            ++R   +  +D           +     P          +    +  LI + +  P 
Sbjct: 166 TILRPAWLTDEDIIDYE------LTSRNEPFKGT-----IVSRKSVAALITDIIDKPE 212

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 58.4 bits (141), Expect = 7e-10
 Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 42/289 (14%)

Query: 21  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAE 79
             +  V + G TG+IG+R+V    +  H   VL R    + +        F   G  + E
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 80  -----EPQWRDCIQGSTAVVN-LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 133
                  +  D ++    V++ LAG  +      ++             K+V+ I E+  
Sbjct: 62  ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQL-------------KLVEAIKEA-- 106

Query: 134 GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYL--AEVCREWEGTALKVNKDVRLALI 191
           G     L S      +G     +     P    ++   +V R  E  ++          +
Sbjct: 107 GNIKRFLPSE-----FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPY------TYV 155

Query: 192 RIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-- 246
              +  G   G+LA++    MM         G G     W+  DD+     +++ +P   
Sbjct: 156 SSNMFAGYFAGSLAQL-DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL 214

Query: 247 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 294
            + +      N +   E+      +  +    + +      A + + ++
Sbjct: 215 NKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 263

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 6/89 (6%)

Query: 20  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 79
            ++   V + GATG  G  L+ R+ ++    +V+  +R    L    +        +   
Sbjct: 2   HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--ALAEHPR----LDNPVGPL 55

Query: 80  EPQWRDCIQGSTAVVNLAGTPIGTRWSSE 108
                             GT I    S E
Sbjct: 56  AELLPQLDGSIDTAFCCLGTTIKEAGSEE 84

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 55.2 bits (134), Expect = 6e-09
 Identities = 46/284 (16%), Positives = 86/284 (30%), Gaps = 53/284 (18%)

Query: 18  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL----TRSRSKAELIFPGKKTRFFP 73
            +   +  + +TG  GFIG  L + L A   +V VL           E      +     
Sbjct: 2   QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLE 61

Query: 74  GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIK-ESRIRVTSKVVDLINESP 132
                        +     V +LA        S   K+ +     +     ++ L     
Sbjct: 62  LEERD--------LSDVRLVYHLAS-HKSVPRS--FKQPLDYLDNVDSGRHLLALCTSV- 109

Query: 133 EGVRPSVLVSATALGYYGTSETEVFDESSPSG-----------NDYLAEVCREWEGTALK 181
            GV   V+ S   +  YG ++T    E SP              + +A   +        
Sbjct: 110 -GVPKVVVGSTCEV--YGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA--- 163

Query: 182 VNKDVRLALIRIGIVLG---KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDD 233
              +V +   R   V G   +        +P     +     L   G G+Q   + ++ D
Sbjct: 164 --PEVGIV--RFFNVYGPGERPDAL----VPRLCANLLTRNELPVEGDGEQRRDFTYITD 215

Query: 234 IVNLIYEALSNPSYRGVIN-GTAPNPVRLAEMCDHLGNVLGRPS 276
           +V+ +    + P    V+N G+    + + ++   L        
Sbjct: 216 VVDKLVALANRPLP-SVVNFGS-GQSLSVNDVIRILQATSPAAE 257

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 24 MTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFP 65
          M + +TGATG +G  +  +          +  R+  K    + 
Sbjct: 1  MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR 43

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 52.0 bits (124), Expect = 9e-08
 Identities = 45/336 (13%), Positives = 86/336 (25%), Gaps = 73/336 (21%)

Query: 26  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----E 80
           V + GATGFIG+ +       +    +L R   ++       K     G +I       +
Sbjct: 13  VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72

Query: 81  PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
                 ++     +      + T     I  +I          +V  +     G     L
Sbjct: 73  EAMEKILKEHEIDIV-----VSTVGGESILDQI---------ALVKAMKAV--GTIKRFL 116

Query: 141 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGI--VLG 198
            S                     G+D       E      +  + VR  +   GI     
Sbjct: 117 PSE-------------------FGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYI 157

Query: 199 KDGGALAKMIP-LFMMFAGGP-------LGSGQQWFSWIHLDDIVNLIYEALSNPSY--R 248
                 +             P        G G     ++   DI     + + +     +
Sbjct: 158 CCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNK 217

Query: 249 GVINGTAPNPVRLAEMCDHLGNVLGRPSW---------------LPVPEFALKA----VL 289
            V    + N + + E+       +GR                    +P+  + A    + 
Sbjct: 218 SVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIF 277

Query: 290 GEGAFVVLEGQRVVPARAKELGFP-FKYRYVKDALK 324
            +G  V              L +P   +R V++   
Sbjct: 278 IKGCQVNFSIDGPEDVEVTTL-YPEDSFRTVEECFG 312

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 41/245 (16%), Positives = 74/245 (30%), Gaps = 58/245 (23%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 86
           VTGA G +G  +   L    H+VR+        AE               +A+     D 
Sbjct: 7   VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE-----EIVAC-DLADAQAVHDL 60

Query: 87  IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 146
           ++    +++L G  +   W      +I ++ I     + +       G    ++ +++  
Sbjct: 61  VKDCDGIIHLGGVSVERPW-----NDILQANIIGAYNLYEAARNL--GKP-RIVFASSNH 112

Query: 147 GYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLALIRIGI 195
                  T   D   P              + LA +              +    IRIG 
Sbjct: 113 TIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFD--------IETLNIRIGS 164

Query: 196 VLGK--DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVIN 252
              K  D   +A                     +W+ +DD + L+  A   P     V+ 
Sbjct: 165 CFPKPKDARMMA---------------------TWLSVDDFMRLMKRAFVAPKLGCTVVY 203

Query: 253 GTAPN 257
           G + N
Sbjct: 204 GASAN 208

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 24 MTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 65
           +++VTGATG +G  ++Q L       Q+  + R+  KA  +  
Sbjct: 1  FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD 44

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 50.3 bits (120), Expect = 3e-07
 Identities = 50/344 (14%), Positives = 87/344 (25%), Gaps = 81/344 (23%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-----GVM 76
           ++  + + G TG IGR +V       +    L R    A    P  K          GV+
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA--NPETKEELIDNYQSLGVI 58

Query: 77  IAE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 131
           + E            I+    V+  AG  +                I    K++  I E+
Sbjct: 59  LLEGDINDHETLVKAIKQVDIVICAAGRLL----------------IEDQVKIIKAIKEA 102

Query: 132 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 191
             G       S                     G D       E      +    +R  + 
Sbjct: 103 --GNVKKFFPSE-------------------FGLDVDRHDAVEPVRQVFEEKASIRRVIE 141

Query: 192 RIGI--VLGKDGGALAKMIPLFMMFAGGPL--------GSGQQWFSWIHLDDIVNLIYEA 241
             G+              +                   G G    +++   D+      A
Sbjct: 142 AEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRA 201

Query: 242 LSNP--SYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF---- 294
            ++P    + V      N +   E+       +G+      V E  +   + E +F    
Sbjct: 202 ANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNY 261

Query: 295 -------VVLEGQRVVPAR------AKELGFP-FKYRYVKDALK 324
                    ++G  V          A E  +P   Y    + L 
Sbjct: 262 LLALYHSQQIKGDAVYEIDPAKDIEASEA-YPDVTYTTADEYLN 304

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 49.9 bits (119), Expect = 4e-07
 Identities = 44/292 (15%), Positives = 90/292 (30%), Gaps = 55/292 (18%)

Query: 18  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 77
            +   +  + + G TG+IG  +V+      H   V TR  S    +    ++    G +I
Sbjct: 6   EENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL---GAII 62

Query: 78  AE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP 132
            +       +  + ++    V++    P                +I    K+++ I  + 
Sbjct: 63  VKGELDEHEKLVELMKKVDVVISALAFP----------------QILDQFKILEAIKVA- 105

Query: 133 EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIR 192
            G     L S              F      G +             ++  + +R A+  
Sbjct: 106 -GNIKRFLPSD-------------F------GVEEDRINALPPFEALIERKRMIRRAIEE 145

Query: 193 IGI--VLGKDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNP 245
             I           +  I   +            G+G+  F+  +  DI     +  ++P
Sbjct: 146 ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP 205

Query: 246 --SYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 294
               R VI   + N +   E+       +G+    + VPE  + A+  E   
Sbjct: 206 RALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPE 257

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 48.5 bits (115), Expect = 6e-07
 Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 13/93 (13%)

Query: 21  ASQMT--VSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 77
           ++ M   +++ GA G I + L   L    +  + +  R            +      V +
Sbjct: 1   SNAMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI----PPEIIDHERVTV 56

Query: 78  AE-----EPQWRDCIQGSTAV-VNLAGTPIGTR 104
            E            +  +  V V    +     
Sbjct: 57  IEGSFQNPGXLEQAVTNAEVVFVGAMESGSDMA 89

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 13/145 (8%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVM-IA 78
            V VTGA GF+   +V++L    ++VR   RS SK                    V  + 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 79  EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 138
           ++  + + I+G+  V ++A + +     S    E+    I  T   +     +P  V+  
Sbjct: 73  KQGAYDEVIKGAAGVAHIA-SVVS---FSNKYDEVVTPAIGGTLNALRAAAATP-SVKRF 127

Query: 139 VLVS--ATALGYYGTSETEVFDESS 161
           VL S   +AL      E    DE S
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKS 152

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 13/97 (13%)

Query: 12  FCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-----------LTRSRSKA 60
           +         S  T  +TG  GFIG  L+++L   N  V             L   ++  
Sbjct: 14  YEEITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLV 73

Query: 61  ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 97
                  +  F  G  I +       ++G   V++ A
Sbjct: 74  STE-QWSRFCFIEG-DIRDLTTCEQVMKGVDHVLHQA 108

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 60
          T++V GATG  G  L++   A  H VR    S    
Sbjct: 7  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 42

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 21  ASQMT-VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI 77
            S M  + + G TG+IG+ +V+   + +H   +  R  +        +    F   GV I
Sbjct: 1   GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60

Query: 78  AE-----EPQWRDCIQGSTAVVNLAGTP 100
            E       +    ++    V++    P
Sbjct: 61  IEGEMEEHEKMVSVLKQVDIVISALPFP 88

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 28 VTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 65
          +TGATG +G  +++ L       Q+  + R+ +KA+ +  
Sbjct: 4  ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA 43

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 50/274 (18%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVMIAEEPQWRDC 86
           VTG++G IG  LV  L     +  V+      A  I         F  + ++   +    
Sbjct: 4   VTGSSGQIGTELVPYLAEKYGKKNVI------ASDIVQRDTGGIKFITLDVSNRDEIDRA 57

Query: 87  IQ--GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLVS 142
           ++     A+ +LAG         E K      ++ +  T  +++   +    V   V++ 
Sbjct: 58  VEKYSIDAIFHLAGILSAK---GE-KDPALAYKVNMNGTYNILEAAKQH--RV-EKVVIP 110

Query: 143 ATALGYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLALI 191
           +T   +   +        + +             + L +   E  G       DVR   +
Sbjct: 111 STIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGL------DVR--SL 162

Query: 192 RIGIVLG---KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS 243
           R   ++    +                          +  +    +++ D +  + +   
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222

Query: 244 NP----SYRGVINGTAPNPVRLAEMCDHLGNVLG 273
                   R   N TA      +E+   +   + 
Sbjct: 223 ADRDKLVLRNGYNVTAYT-FTPSELYSKIKERIP 255

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
            V +TG  G IG  + + L     +V  +
Sbjct: 22 KKVFITGICGQIGSHIAELLLERGDKVVGI 51

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 207 MIPLFM--MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN-GTAPNPVRLAE 263
            +P+F   +  G      +    ++ + D+      A+    + G  +  +    V + E
Sbjct: 198 PLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGH-GAYHFSSG-TDVAIKE 255

Query: 264 MCDHLGNVLGRPSWLPVPEFA 284
           + D +   +  PS  P PE  
Sbjct: 256 LYDAVVEAMALPS-YPEPEIR 275

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 14 TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFF 72
          +S    + S M + +TG  G +G  L++      H++ V+   +  K E++ P       
Sbjct: 11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVI 70

Query: 73 PG 74
           G
Sbjct: 71 EG 72

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 21 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKA 60
            +  V V G TG  G  + + L  D   +VRV+TR+  K 
Sbjct: 3  VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 43

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
            + +S+TGA GFI   + +RL+ + H V   
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHEGHYVIAS 59

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 9/87 (10%)

Query: 20  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL----TRSRSKAELIFPGKKTRFFPGV 75
            A      +TG  GFIG  L++ L   + +V  L    T  +   + +      + +   
Sbjct: 24  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83

Query: 76  M-----IAEEPQWRDCIQGSTAVVNLA 97
                 I       +   G   V++ A
Sbjct: 84  KFIQGDIRNLDDCNNACAGVDYVLHQA 110

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
          M + VTG  GFIG  LV +L    ++V V+
Sbjct: 1  MRIVVTGGAGFIGSHLVDKLVELGYEVVVV 30

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 43.3 bits (103), Expect = 5e-05
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
          M V VTG  GFIG  +V+ L A   +V VL
Sbjct: 1  MRVLVTGGAGFIGSHIVEDLLARGLEVAVL 30

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 41.8 bits (97), Expect = 1e-04
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 82
          M V++ G TG +G+ L  RL    H++ V +R   KAE      +       +   + +
Sbjct: 1  MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE 59

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 55/214 (25%)

Query: 111 KEIKES-RIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-------- 161
           K++++  +  ++ + +D I  S + V  ++ +    L        + F E          
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 162 ----------PSGN--DYLAEVCREWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMI 208
                     PS     Y+ +  R +    +    +V RL      + L +   AL ++ 
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY---LKLRQ---ALLELR 148

Query: 209 PLFMMFAGGPLGSGQQW--------------FS----WIHL--DDIVNLIYEALSN---- 244
           P   +   G LGSG+ W                    W++L   +    + E L      
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 245 --PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 276
             P++    + ++   +R+  +   L  +L    
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 17 HTQKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVL 53
             +    T+ +TG  GF+G  L    Q ++   +V VL
Sbjct: 4  IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVL 42

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 24 MTVSVTGATGFIGRRLVQRLQAD-------NHQVRVL 53
          M +++ GA G +GR+L QRL  D         +  ++
Sbjct: 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI 51

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 3/94 (3%)

Query: 11  VFCTSDHTQKASQMTVSVTGATGFIGRRLVQR-LQADNHQVRVLTRSRSKAELIFPGKKT 69
              +        +  V + G  GFIG  L +R L+ D+++V  L                
Sbjct: 303 RLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF 362

Query: 70  RFFPGVMIAEEPQWRDCIQGSTAVVNLAG--TPI 101
            F  G +          ++    V+ L    TPI
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPI 396

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
            + VTG  GFIG  +V +L ++++++ V+
Sbjct: 2  SLIVVTGGAGFIGSHVVDKL-SESNEIVVI 30

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 66
            Q  V + G TG  G+ L  ++    + V   +R+   + L+  G
Sbjct: 17 EKQGVVCIFG-TGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRG 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	328
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.98
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.98
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.98
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.96
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.93
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.93
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.92
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.92
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.92
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.9
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.9
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.9
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.89
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.89
1spx_A	278	Short-chain reductase family member (5L265); paral	99.89
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.89
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.89
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.89
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.89
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.88
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.88
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.88
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.88
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.88
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.87
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.87
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.87
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.87
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.87
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.87
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.87
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.87
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.87
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.87
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.87
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.87
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.87
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.87
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.87
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.87
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.86
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.86
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.86
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.86
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.86
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.86
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.86
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.86
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.86
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.86
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.86
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.86
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.86
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.86
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.86
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.86
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.86
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.86
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.86
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.86
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.86
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.86
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.86
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.86
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.85
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.85
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.85
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.85
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.85
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.85
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.85
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.85
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.85
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.85
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.85
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.85
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.85
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.85
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.85
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.85
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.85
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.85
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.85
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.85
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.85
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.85
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.84
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.84
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.84
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.84
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.84
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.84
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.84
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.84
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.84
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.84
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.84
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.84
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.84
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.84
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.84
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.84
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.84
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.84
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.84
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.84
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.84
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.84
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.84
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.84
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.84
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.84
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.83
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.83
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.83
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.83
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.83
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.83
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.83
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.83
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.83
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.83
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.83
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.83
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.83
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.83
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.83
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.83
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.83
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.83
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.83
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.83
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.83
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.83
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.83
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.83
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.83
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.82
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.82
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.82
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.82
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.82
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.82
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.82
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.82
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.82
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.82
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.82
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.82
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.82
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.82
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.82
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.82
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.82
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.81
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.81
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.81
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.81
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.81
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.81
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.81
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.8
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.8
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.8
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.8
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.8
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.8
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.8
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.8
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.8
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.8
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.79
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.79
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.79
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.79
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.78
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.78
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.77
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.77
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.77
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.77
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.77
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.77
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.77
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.76
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.75
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.75
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.74
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.74
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.74
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.74
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.74
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.73
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.72
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.72
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.72
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.72
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.7
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.7
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.69
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.64
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.63
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.6
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.59
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.58
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.56
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.41
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.36
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.33
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.28
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.26
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.26
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.22
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.2
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.2
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.17
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.16
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.11
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.1
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.93
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.79
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.74
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.72
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.7
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.67
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.66
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.63
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.57
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.56
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.53
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.52
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.51
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.4
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.39
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.31
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.3
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.23
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.23
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.21
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.18
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.17
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.16
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.14
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.13
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.11
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.11
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.09
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.09
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.07
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.06
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.04
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.03
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.02
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.02
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.02
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.01
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.99
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.97
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.96
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.94
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.93
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.9
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.88
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.88
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.88
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.87
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.86
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.86
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.85
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.84
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.84
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.83
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.83
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.8
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.79
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.78
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.77
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.76
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.74
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.73
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.72
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.71
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.7
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.7
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.69
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.68
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.67
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.67
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.67
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.67
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.66
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.66
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.65
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.65
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.64
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.64
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.63
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.63
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.62
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.62
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.62
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.61
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.59
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.59
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.59
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.59
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.58
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.57
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.55
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.54
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.53
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.52
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.51
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.51
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.51
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.49
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.48
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.46
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.45
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.45
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.45
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.45
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.44
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.44
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.43
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.43
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.43
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.42
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.42
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.42
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.41
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.41
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	97.4
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.4
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.4
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.39
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.39
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.39
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.39
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	97.38
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.38
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.38
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.37
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.37
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.36
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.35
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.35
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.35
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.34
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.33
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.32
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.32
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.3
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.3
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.3
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.29
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.28
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.27
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.27
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.27
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.27
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.26
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.25
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.25
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.24
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.24
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.22
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	97.22
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.21
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.21
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.2
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.2
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.19
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.17
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.16
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.15
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.13
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.13
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.12
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.12
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.11
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.11
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.1
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.1
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.08
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.08
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.07
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.06
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.06
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.06
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.03
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.03
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.03
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.03
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.02
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.01
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.0
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.99
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.99
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.97
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.93

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.2e-47  Score=326.15  Aligned_cols=288  Identities=35%  Similarity=0.643  Sum_probs=236.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC-
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-  102 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~-  102 (328)
                      |||||||||||||++|+++|+++||+|++++|++.+.               ++...+...+.++++|+|||+|+.... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~~~~~~~~~~l~~~d~vihla~~~i~~   65 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RITWDELAASGLPSCDAAVNLAGENILN   65 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EEEHHHHHHHCCCSCSEEEECCCCCSSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------eeecchhhHhhccCCCEEEEeccCcccc
Confidence            7899999999999999999999999999999976431               121122334567899999999985322 


Q ss_pred             --CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc-hHHHHHHHHHHHH
Q 020254          103 --TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWEGTA  179 (328)
Q Consensus       103 --~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~-y~~k~~~~~~~~~  179 (328)
                        ..+.......+.+.|+.++.++++++.........+|+.||+++  ||.....+.+|++|..+. ++.+.+.+++.+.
T Consensus        66 ~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~v--yg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~  143 (298)
T 4b4o_A           66 PLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAY--YQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAA  143 (298)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGG--SCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeee--ecCCCCCcccccCCccccchhHHHHHHHHHHH
Confidence              34567777889999999999999999984333445777788777  999888889999887653 4666666666666


Q ss_pred             hcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCcc
Q 020254          180 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV  259 (328)
Q Consensus       180 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~  259 (328)
                      .....+++++++||+.|||++++....+........+..++++++.+++||++|+|++++.+++++...|+||+++++++
T Consensus       144 ~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~  223 (298)
T 4b4o_A          144 RLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSA  223 (298)
T ss_dssp             CCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCC
T ss_pred             HhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCcc
Confidence            66667999999999999999876665555555555555668999999999999999999999999887889999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcc-eeeecCcccCchHHHHCCCCcccccHHHHHHHhhC
Q 020254          260 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA-FVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       260 ~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      |++|+++.+++.+|++..+++|.+.++...+++. .....+++++++|++++||+|+|++++++|+++++
T Consensus       224 t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~  293 (298)
T 4b4o_A          224 TNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAE  293 (298)
T ss_dssp             BHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            9999999999999998888999999988777543 44567788999999999999999999999999863

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=8e-43  Score=301.36  Aligned_cols=281  Identities=21%  Similarity=0.232  Sum_probs=221.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      |+|+|||||||||||++|++.|+++|++|++++|++.... + ...   .+..+|+. .+++.++++++|+|||+|+...
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~~~---~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~   74 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-NDY---EYRVSDYT-LEDLINQLNDVDAVVHLAATRG   74 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CC---EEEECCCC-HHHHHHHTTTCSEEEECCCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-Cce---EEEEcccc-HHHHHHhhcCCCEEEEccccCC
Confidence            4589999999999999999999999999999999944333 2 211   25567998 9999999999999999999753


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~  178 (328)
                      ..     ++...++.|+.++.++++++++  .+++++||+||.++  ||.....+++|+++..  +.| .+|...|....
T Consensus        75 ~~-----~~~~~~~~n~~~~~~ll~a~~~--~~~~r~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  145 (311)
T 3m2p_A           75 SQ-----GKISEFHDNEILTQNLYDACYE--NNISNIVYASTISA--YSDETSLPWNEKELPLPDLMYGVSKLACEHIGN  145 (311)
T ss_dssp             SS-----SCGGGTHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--CCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             CC-----ChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHH--hCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Confidence            32     3456778999999999999999  78899999999998  9987777888888754  456 77777777777


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCCCceEEe
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  253 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i  253 (328)
                      .+....+++++++||+.+||++.... .++.. + ....+.++   ++++..++++|++|+|++++.+++.+..+++||+
T Consensus       146 ~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i  224 (311)
T 3m2p_A          146 IYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNI  224 (311)
T ss_dssp             HHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred             HHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEe
Confidence            77666799999999999999986432 22222 2 33345553   6788899999999999999999998766779999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          254 TAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       254 ~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      ++++++|+.|+++.+.+.+|.+..+ ..|..         .........++++|+++ |||+|+++ ++++|+++++
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~l~~~~~  291 (311)
T 3m2p_A          225 GSGDALTNYEVANTINNAFGNKDNLLVKNPN---------ANEGIHSSYMDSSKAKELLDFSTDYN-FATAVEEIHL  291 (311)
T ss_dssp             CCSCEECHHHHHHHHHHHTTCTTCEEECSSS---------BCCSCCCBCBCCHHHHHHSCCCCSCC-HHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHhCCCCcceecCCC---------CCCCcCceecCHHHHHHHhCCCcccC-HHHHHHHHHH
Confidence            9999999999999999999986322 22221         11223456778888976 99999995 9999999863

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=9.1e-43  Score=306.09  Aligned_cols=298  Identities=16%  Similarity=0.158  Sum_probs=226.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---------CccccCceeecCChhhHhhcCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---------KTRFFPGVMIAEEPQWRDCIQGST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~d   91 (328)
                      .++|+|||||||||||++|++.|+++|++|++++|++..........         ....+..+|+.|.+++.++++++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            45689999999999999999999999999999999876432211000         001145679999999999999999


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-H
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L  168 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~  168 (328)
                      +|||+|+.. .......++...++.|+.++.+++++|++  .+++++||+||.++  ||.....+++|+.+..  +.| .
T Consensus       103 ~Vih~A~~~-~~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~  177 (351)
T 3ruf_A          103 HVLHQAALG-SVPRSIVDPITTNATNITGFLNILHAAKN--AQVQSFTYAASSST--YGDHPALPKVEENIGNPLSPYAV  177 (351)
T ss_dssp             EEEECCCCC-CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCSHHHH
T ss_pred             EEEECCccC-CcchhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEecHHh--cCCCCCCCCccCCCCCCCChhHH
Confidence            999999964 22233455678899999999999999999  68899999999999  9988888889988753  456 7


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...|.....+....+++++++||++|||++....   ..+++.+  ....+.++   +++++.++++|++|+|++++.
T Consensus       178 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~  257 (351)
T 3ruf_A          178 TKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNIL  257 (351)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHH
Confidence            777777777766666699999999999999975332   1233322  33455553   678899999999999999999


Q ss_pred             HhhCC-C-CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccc
Q 020254          241 ALSNP-S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYR  317 (328)
Q Consensus       241 ~~~~~-~-~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~  317 (328)
                      ++..+ . .+++||+++++++|+.|+++.+.+.+|.+..+....    ...............++++|+++ |||+|+++
T Consensus       258 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  333 (351)
T 3ruf_A          258 SALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLS----IKYREFRSGDVRHSQADVTKAIDLLKYRPNIK  333 (351)
T ss_dssp             HHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC---------EEECCCTTCCSBCCBCCHHHHHHHCCCCCCC
T ss_pred             HHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccc----ccccCCCCCccceeeeCHHHHHHHhCCCCCCC
Confidence            99873 2 566999999999999999999999999753221110    00111111122456778888865 99999995


Q ss_pred             cHHHHHHHhhC
Q 020254          318 YVKDALKAIMS  328 (328)
Q Consensus       318 ~~~~~l~~~l~  328 (328)
                       ++++|+++++
T Consensus       334 -~~~~l~~~~~  343 (351)
T 3ruf_A          334 -IREGLRLSMP  343 (351)
T ss_dssp             -HHHHHHHHHH
T ss_pred             -HHHHHHHHHH
Confidence             9999999863

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-42  Score=298.78  Aligned_cols=288  Identities=20%  Similarity=0.283  Sum_probs=217.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      ||+|||||||||||++|+++|+++|+ ++++++............  ..+..+|+.| +++.++++++|+|||+|+.. .
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~~--~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~-~   75 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVNEA--ARLVKADLAA-DDIKDYLKGAEEVWHIAANP-D   75 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSCTT--EEEECCCTTT-SCCHHHHTTCSEEEECCCCC-C
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcCCC--cEEEECcCCh-HHHHHHhcCCCEEEECCCCC-C
Confidence            57899999999999999999999994 445555443322222111  1244678888 89999999999999999964 3


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHHHHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTA  179 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~  179 (328)
                      .......+...+++|+.++.++++++++  .+++++||+||.++  ||.....+++|+.+.  .+.| .+|...|.....
T Consensus        76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           76 VRIGAENPDEIYRNNVLATYRLLEAMRK--AGVSRIVFTSTSTV--YGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CC-CCCCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCchHH--hCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            3445567788999999999999999998  67889999999999  998877788887764  3457 778888887777


Q ss_pred             hcccCCCeEEEEEeceEEcCCCcchhhhHH-HH-HHHcC-CC---CCCCCcccccccHHHHHHHHHHHhhCCCCCceEEe
Q 020254          180 LKVNKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  253 (328)
Q Consensus       180 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~-~~-~~~~~-~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i  253 (328)
                      +....+++++++||++|||++...  .++. .+ ....+ .+   .+++++.++++|++|+|++++.+++....+++||+
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni  229 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNI  229 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEE
Confidence            777779999999999999997542  2222 22 22333 22   37788899999999999999999995555679999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhhC
Q 020254          254 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       254 ~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      ++++++++.|+++.+.+.+|.+..+..+..... ..+     ......++++|+++|||+|+++ ++++|+++++
T Consensus       230 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~-----~~~~~~~d~~k~~~lG~~p~~~-~~e~l~~~~~  297 (313)
T 3ehe_A          230 GSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRG-WKG-----DVPVMLLSIEKLKRLGWKPRYN-SEEAVRMAVR  297 (313)
T ss_dssp             CCSCCEEHHHHHHHHHHHTTCCCEEEEC------------------CCBCCHHHHHHTCCCSCC-HHHHHHHHHH
T ss_pred             CCCCCeeHHHHHHHHHHHhCCCCceEECCCccC-Ccc-----ccceeccCHHHHHHcCCCCCCC-HHHHHHHHHH
Confidence            999999999999999999998754433321110 011     1123567888898899999995 9999999863

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.2e-42  Score=317.49  Aligned_cols=290  Identities=34%  Similarity=0.601  Sum_probs=211.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      +|+|||||||||||++|++.|+++||+|++++|++.+..          ....|+.+  .+.+++.++|+|||+|+....
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~  214 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------KRFWDPLN--PASDLLDGADVLVHLAGEPIF  214 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------CEECCTTS--CCTTTTTTCSEEEECCCC---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------ceeecccc--hhHHhcCCCCEEEECCCCccc
Confidence            689999999999999999999999999999999876532          12234433  356777899999999997544


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHH-HhcCCCCCCcEEEEecccceeec-CCCcccccCCCCCCCchHHHHHHHHHHHH-
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDL-INESPEGVRPSVLVSATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTA-  179 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~~v~~Ss~~v~~yg-~~~~~~~~e~~~~~~~y~~k~~~~~~~~~-  179 (328)
                      ..+....+...++.|+.++.+++++ +++  .+++++||+||.++  || .....+++|+.+....++.+.+.+++... 
T Consensus       215 ~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~--~~~~r~V~~SS~~v--yg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~  290 (516)
T 3oh8_A          215 GRFNDSHKEAIRESRVLPTKFLAELVAES--TQCTTMISASAVGF--YGHDRGDEILTEESESGDDFLAEVCRDWEHATA  290 (516)
T ss_dssp             --CCGGGHHHHHHHTHHHHHHHHHHHHHC--SSCCEEEEEEEGGG--GCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCcceE--ecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH
Confidence            4566778889999999999999999 555  67889999999999  98 45556788988875555555555444322 


Q ss_pred             hcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCcc
Q 020254          180 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV  259 (328)
Q Consensus       180 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~  259 (328)
                      .....|++++++||++|||++.+....+...+.......++++++.+++||++|+|++++.++.++...|+||+++++++
T Consensus       291 ~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~  370 (516)
T 3oh8_A          291 PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPV  370 (516)
T ss_dssp             HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCE
T ss_pred             HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCC
Confidence            22246999999999999999854433333222222233457788999999999999999999998777789999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCc--ceeeecCcccCchHHHHCCCCcccccHHHHHHHhhC
Q 020254          260 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG--AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       260 ~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      |+.|+++.+.+.+|.+..+++|.+..+...++.  ......+.+++++|+++|||+|++++++++|+++++
T Consensus       371 s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~  441 (516)
T 3oh8_A          371 SNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELG  441 (516)
T ss_dssp             EHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhC
Confidence            999999999999998876778888777666665  455667788899999999999999889999999874

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=8.7e-42  Score=299.27  Aligned_cols=296  Identities=19%  Similarity=0.227  Sum_probs=217.4

Q ss_pred             cccccCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcc--cccCCCC--CccccCceeecCChhhHhhcCC-
Q 020254           17 HTQKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--ELIFPGK--KTRFFPGVMIAEEPQWRDCIQG-   89 (328)
Q Consensus        17 ~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~-   89 (328)
                      ++++.++|+|||||||||||++|+++|+++|  ++|++++|.....  ..+....  ....+..+|+.|++.+.+++++ 
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            3444567899999999999999999999999  7888888875322  1111110  1112446789999999999986 


Q ss_pred             -CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC-CcccccCCCCCC--C
Q 020254           90 -STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDESSPSG--N  165 (328)
Q Consensus        90 -~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~-~~~~~~e~~~~~--~  165 (328)
                       +|+|||+|+.... ......+...+++|+.++.+++++|++  .+++++||+||.++  ||.. ...+++|+++..  .
T Consensus        98 ~~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~~v--y~~~~~~~~~~E~~~~~p~~  172 (346)
T 4egb_A           98 DVQVIVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKK--YPHIKLVQVSTDEV--YGSLGKTGRFTEETPLAPNS  172 (346)
T ss_dssp             TCCEEEECCCCC----------CHHHHHHTHHHHHHHHHHHH--STTSEEEEEEEGGG--GCCCCSSCCBCTTSCCCCCS
T ss_pred             CCCEEEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeCchHH--hCCCCcCCCcCCCCCCCCCC
Confidence             9999999997532 234456678899999999999999999  68899999999998  9976 455788888754  4


Q ss_pred             ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...|.....+...++++++++||+.+||++.... .+++.+  ....+.++   +++...+++||++|+|++++
T Consensus       173 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  251 (346)
T 4egb_A          173 PYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAID  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHH
Confidence            56 7777777777776666699999999999999976432 223222  33445543   67888999999999999999


Q ss_pred             HHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccc
Q 020254          240 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYR  317 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~  317 (328)
                      .++..+..+++||+++++++++.|+++.+.+.+|.+.. +.....         .........++++|++ .|||+|+++
T Consensus       252 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~~  322 (346)
T 4egb_A          252 VVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTD---------RLGHDRRYAINAEKMKNEFDWEPKYT  322 (346)
T ss_dssp             HHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC-----------CCCSCCCBCCHHHHHHHCCCCCCC
T ss_pred             HHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCC---------CCCCcceeeccHHHHHHHcCCCCCCC
Confidence            99998776669999999999999999999999998632 211100         0111233457788886 599999995


Q ss_pred             cHHHHHHHhhC
Q 020254          318 YVKDALKAIMS  328 (328)
Q Consensus       318 ~~~~~l~~~l~  328 (328)
                       ++++|+++++
T Consensus       323 -~~e~l~~~~~  332 (346)
T 4egb_A          323 -FEQGLQETVQ  332 (346)
T ss_dssp             -HHHHHHHHHH
T ss_pred             -HHHHHHHHHH
Confidence             9999999863

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=4.2e-41  Score=290.75  Aligned_cols=288  Identities=22%  Similarity=0.243  Sum_probs=217.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+|||||||||||++|++.|+++|++|++++|++..........  ..+...|+.|.+ +.+++++ |+|||+|+.. ..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~-~~   75 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPS--AELHVRDLKDYS-WGAGIKG-DVVFHFAANP-EV   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTT--SEEECCCTTSTT-TTTTCCC-SEEEECCSSC-SS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCC--ceEEECccccHH-HHhhcCC-CEEEECCCCC-Cc
Confidence            68999999999999999999999999999999876654433211  124467898988 8888888 9999999964 33


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHHHHHHHHh
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~  180 (328)
                      ......+...+++|+.++.++++++++  .+++++||+||.++  ||.....+++|+.+.  .+.| .+|...|.....+
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~v--yg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~  151 (312)
T 3ko8_A           76 RLSTTEPIVHFNENVVATFNVLEWARQ--TGVRTVVFASSSTV--YGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATY  151 (312)
T ss_dssp             SGGGSCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeCcHHH--hCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            445566788899999999999999998  68889999999999  998877788888774  3456 7787777777776


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcC-CC---CCCCCcccccccHHHHHHHHHHHhhC---C-CCCceE
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSN---P-SYRGVI  251 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~i~v~D~a~~~~~~~~~---~-~~~g~~  251 (328)
                      ..+.+++++++||+++|||+.... .+...+ ....+ .+   .+++.+.++++|++|+|++++.+++.   + ..+++|
T Consensus       152 ~~~~g~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          152 ARLFGVRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHCCEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHhCCCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence            666699999999999999975321 111122 22233 22   36778899999999999999999987   3 345699


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHH-HhcCcceeeecCcccCchHH-HHCCCCcccccHHHHHHHhh
Q 020254          252 NGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKA-VLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       252 ~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~lG~~p~~~~~~~~l~~~l  327 (328)
                      |+++++++++.|+++.+.+.+|.+..+. .|...... ..++     .....++++|+ +.|||+|+++ ++++|++++
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lG~~p~~~-~~~~l~~~~  303 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGD-----VKYMTLAVTKLMKLTGWRPTMT-SAEAVKKTA  303 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CC-----CSEECBCCHHHHHHHCCCCSSC-HHHHHHHHH
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCC-----ccccccCHHHHHHHhCCCCCCC-HHHHHHHHH
Confidence            9999999999999999999999874332 23221111 1111     22356777888 5699999995 999999986

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.2e-41  Score=290.43  Aligned_cols=266  Identities=18%  Similarity=0.178  Sum_probs=208.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC-CcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG-STAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~d~vi~~a~~~  100 (328)
                      ++|+||||| +||||++|++.|+++|++|++++|++.....   ..   .+..+|+.|.+.+.+++++ +|+|||+|+..
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~---~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMPA---GV---QTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCCT---TC---CEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccccc---CC---ceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            357999999 5999999999999999999999998765321   11   1556799999999999987 99999999852


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC--ch-HHHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEG  177 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~  177 (328)
                            ...+...++.|+.++.++++++++  .+++++||+||.++  ||.....+++|+.+..+  .| .+|...|.. 
T Consensus        75 ------~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-  143 (286)
T 3gpi_A           75 ------EYSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSSTGV--YGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-  143 (286)
T ss_dssp             ------HHC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEGGG--CCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEcccEE--EcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-
Confidence                  244567888999999999999998  78899999999999  99888888899888643  45 445444444 


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC---CCCCceEEec
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN---PSYRGVINGT  254 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~g~~~i~  254 (328)
                        ..  . ++++++||+++||++...   ++..+.  .....+.++..++++|++|+|++++.++..   ...+++||++
T Consensus       144 --~~--~-~~~~ilR~~~v~G~~~~~---~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~  213 (286)
T 3gpi_A          144 --LA--A-YSSTILRFSGIYGPGRLR---MIRQAQ--TPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVT  213 (286)
T ss_dssp             --GG--G-SSEEEEEECEEEBTTBCH---HHHHTT--CGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             --Hh--c-CCeEEEecccccCCCchh---HHHHHH--hcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEe
Confidence              22  2 899999999999998642   222211  111136678889999999999999999987   3467799999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          255 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       255 ~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      +++++++.|+++.+.+.+|.+..+..+.            .......++++|++.|||+|++++++++|++++
T Consensus       214 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~  274 (286)
T 3gpi_A          214 DNQPLPVHDLLRWLADRQGIAYPAGATP------------PVQGNKKLSNARLLASGYQLIYPDYVSGYGALL  274 (286)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCCCCSCCC------------CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCCCCc------------ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHH
Confidence            9999999999999999999875444332            123567788899999999999956999999986

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.2e-41  Score=298.55  Aligned_cols=280  Identities=20%  Similarity=0.234  Sum_probs=218.7

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ...++|+|||||||||||++|++.|+++|++|++++|++..     ...   .+..+|+.|.+.+.++++++|+|||+|+
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~---~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGG---EEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCC---SEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCc---cEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            33456899999999999999999999999999999998765     111   1456799999999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecC--CCcccccCCCCCC--Cch-HHHHHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT--SETEVFDESSPSG--NDY-LAEVCR  173 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~--~~~~~~~e~~~~~--~~y-~~k~~~  173 (328)
                      ..   ..........+++|+.++.++++++.+  .+++++||+||.++  ||.  ....+++|+.+..  +.| .+|...
T Consensus        87 ~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~V~~SS~~v--yg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  159 (347)
T 4id9_A           87 FM---SWAPADRDRMFAVNVEGTRRLLDAASA--AGVRRFVFASSGEV--YPENRPEFLPVTEDHPLCPNSPYGLTKLLG  159 (347)
T ss_dssp             CC---CSSGGGHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--TTTTSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cc---CcchhhHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHH--hCCCCCCCCCcCCCCCCCCCChHHHHHHHH
Confidence            64   233444588999999999999999999  78899999999999  997  4566788888743  456 778777


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEE-------------cCCCcch----------hhhHHHH--HHHcCCCC---CCCCcc
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVL-------------GKDGGAL----------AKMIPLF--MMFAGGPL---GSGQQW  225 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~-------------g~~~~~~----------~~~~~~~--~~~~~~~~---~~~~~~  225 (328)
                      |.....+....+++++++||+.+|             ||+....          ..++..+  ....+.++   +++...
T Consensus       160 E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (347)
T 4id9_A          160 EELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENG  239 (347)
T ss_dssp             HHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTC
T ss_pred             HHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcc
Confidence            777777766679999999999999             7753221          2233322  23344443   566778


Q ss_pred             ccc----ccHHHHHHHHHHHhhCCC-CCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecC
Q 020254          226 FSW----IHLDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEG  299 (328)
Q Consensus       226 ~~~----i~v~D~a~~~~~~~~~~~-~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~  299 (328)
                      +++    +|++|+|++++.++..+. .+++||+++++++++.|+++.+.+.+|.+..+ ..|..             ...
T Consensus       240 ~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------------~~~  306 (347)
T 4id9_A          240 RPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGD-------------GVY  306 (347)
T ss_dssp             CBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSC-------------CCB
T ss_pred             cCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCc-------------ccc
Confidence            888    999999999999999873 56799999999999999999999999976322 12211             015


Q ss_pred             cccCchHHHH-CCCCcccccHHHHHHHhh
Q 020254          300 QRVVPARAKE-LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       300 ~~~~~~~~~~-lG~~p~~~~~~~~l~~~l  327 (328)
                      ..++++|+++ |||+|+++ ++++|++++
T Consensus       307 ~~~d~~k~~~~lG~~p~~~-~~~~l~~~~  334 (347)
T 4id9_A          307 YHTSNERIRNTLGFEAEWT-MDRMLEEAA  334 (347)
T ss_dssp             CCBCCHHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             cccCHHHHHHHhCCCCCCC-HHHHHHHHH
Confidence            6678888865 99999995 999999986

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=4e-42  Score=304.32  Aligned_cols=298  Identities=15%  Similarity=0.195  Sum_probs=221.1

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeec-CChhhHhhcCCCcEEEECC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a   97 (328)
                      ..+||+|||||||||||++|++.|+++ ||+|++++|++.+......... ..+..+|+. |.+.+.++++++|+|||+|
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A   99 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHER-MHFFEGDITINKEWVEYHVKKCDVILPLV   99 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTT-EEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCC-eEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence            345689999999999999999999998 9999999999876554432111 124467998 8899999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---------CCch-
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-  167 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---------~~~y-  167 (328)
                      +.... .....++...+++|+.++.+++++|++  .+ +++||+||.++  ||.....+++|++++         .+.| 
T Consensus       100 ~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~-~~~v~~SS~~v--yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~  173 (372)
T 3slg_A          100 AIATP-ATYVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTSEV--YGMCADEQFDPDASALTYGPINKPRWIYA  173 (372)
T ss_dssp             CCCCH-HHHHHCHHHHHHHHTTTTHHHHHHHHH--HT-CEEEEECCGGG--GBSCCCSSBCTTTCCEEECCTTCTTHHHH
T ss_pred             ccccH-HHHhhCHHHHHHHHHHHHHHHHHHHHH--hC-CcEEEeCcHHH--hCCCCCCCCCccccccccCCCCCCCCcHH
Confidence            97422 122345678889999999999999999  56 89999999998  998777777777642         2356 


Q ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-------hhhhHHHH--HHHcCCCC---CCCCcccccccHHHHH
Q 020254          168 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIV  235 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a  235 (328)
                      .+|...|.....+... +++++++||++|||++...       ...++..+  ....+.++   +++++.++++|++|+|
T Consensus       174 ~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  252 (372)
T 3slg_A          174 CSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGI  252 (372)
T ss_dssp             HHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHH
Confidence            7787778777777666 9999999999999997532       12233322  33455553   5678899999999999


Q ss_pred             HHHHHHhhCCC---CCceEEecC-CCccCHHHHHHHHHHHhCCCCCCCCcHHHHH-------HHhcCcceeeecCcccCc
Q 020254          236 NLIYEALSNPS---YRGVINGTA-PNPVRLAEMCDHLGNVLGRPSWLPVPEFALK-------AVLGEGAFVVLEGQRVVP  304 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~-~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~~  304 (328)
                      ++++.+++.+.   .+++||+++ ++++|+.|+++.+.+.+|.+..+........       ...+ ..........+++
T Consensus       253 ~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~  331 (372)
T 3slg_A          253 SALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYG-NGYQDVQNRVPKI  331 (372)
T ss_dssp             HHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC--------------CCCCBCC
T ss_pred             HHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecccccccc-CCccccceeecCH
Confidence            99999999863   466999999 4899999999999999997632211110000       0000 0001223456677


Q ss_pred             hHHHH-CCCCcccccHHHHHHHhh
Q 020254          305 ARAKE-LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       305 ~~~~~-lG~~p~~~~~~~~l~~~l  327 (328)
                      +|+++ |||+|+++ ++++|++++
T Consensus       332 ~k~~~~lG~~p~~~-l~e~l~~~~  354 (372)
T 3slg_A          332 ENTMQELGWAPQFT-FDDALRQIF  354 (372)
T ss_dssp             HHHHHHHTCCCCCC-HHHHHHHHH
T ss_pred             HHHHHHcCCCCCCC-HHHHHHHHH
Confidence            88865 99999995 999999986

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-40  Score=291.61  Aligned_cols=291  Identities=19%  Similarity=0.211  Sum_probs=220.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC--CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d~vi   94 (328)
                      ++|+|||||||||||+++++.|+++|++|++++|+..........     .....+..+|+.|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            567999999999999999999999999999999987654322110     0001144679999999999997  899999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEV  171 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~  171 (328)
                      |+|+.... ......+...++.|+.++.++++++++  .+++++|++||.++  ||.....+++|+.+..  +.| .+|.
T Consensus        84 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~e~~~~~~~~~Y~~sK~  158 (341)
T 3enk_A           84 HFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRE--RAVKRIVFSSSATV--YGVPERSPIDETFPLSATNPYGQTKL  158 (341)
T ss_dssp             ECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--BCSCSSSSBCTTSCCBCSSHHHHHHH
T ss_pred             ECcccccc-CccccChHHHHHHHHHHHHHHHHHHHh--CCCCEEEEEecceE--ecCCCCCCCCCCCCCCCCChhHHHHH
Confidence            99997421 122344567889999999999999999  67889999999998  9988777888888753  456 7787


Q ss_pred             HHHHHHHHhcccC-CCeEEEEEeceEEcCCCcc---------hhhhHHHH-HHHcC--CCC---C------CCCcccccc
Q 020254          172 CREWEGTALKVNK-DVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------SGQQWFSWI  229 (328)
Q Consensus       172 ~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~~~~~--~~~---~------~~~~~~~~i  229 (328)
                      ..|.....+..+. +++++++||+++||++...         ...+.+.+ ....+  .++   +      ++++.++++
T Consensus       159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  238 (341)
T 3enk_A          159 MAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI  238 (341)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred             HHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence            7777776666555 4999999999999995311         12334433 22222  222   3      678899999


Q ss_pred             cHHHHHHHHHHHhhCC---CCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecCcccCch
Q 020254          230 HLDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPA  305 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~---~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~  305 (328)
                      |++|+|++++.++..+   ..+++||+++++++|+.|+++.+.+.+|.+..+. .|..     .+     ......++++
T Consensus       239 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~-----~~~~~~~d~~  308 (341)
T 3enk_A          239 HVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARR-----PG-----DVAECYANPA  308 (341)
T ss_dssp             EHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-----TT-----CCSEECBCCH
T ss_pred             EHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCC-----CC-----CccccccCHH
Confidence            9999999999998862   3467999999999999999999999999874321 1110     11     1123556778


Q ss_pred             HHH-HCCCCcccccHHHHHHHhhC
Q 020254          306 RAK-ELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       306 ~~~-~lG~~p~~~~~~~~l~~~l~  328 (328)
                      |++ .|||+|+++ ++++|+++++
T Consensus       309 k~~~~lG~~p~~~-l~~~l~~~~~  331 (341)
T 3enk_A          309 AAAETIGWKAERD-LERMCADHWR  331 (341)
T ss_dssp             HHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHcCCCCCCC-HHHHHHHHHH
Confidence            885 599999995 9999999863

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=7.1e-40  Score=288.80  Aligned_cols=284  Identities=15%  Similarity=0.145  Sum_probs=215.8

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHh--CCCeEEEEecCCCc------------ccccCCCCCccccCceeecCChhhHh
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSK------------AELIFPGKKTRFFPGVMIAEEPQWRD   85 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~--~g~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~d~~~~~~~~~   85 (328)
                      ..++|+|||||||||||++|++.|++  .|++|++++|+...            ........ ...+..+|+.|++.+++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF-KGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTC-CSEEEECCTTCHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcccc-CceEEECCCCCHHHHHH
Confidence            34568999999999999999999999  99999999997651            11101100 11244579999999999


Q ss_pred             h-cCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           86 C-IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        86 ~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      + ..++|+|||+|+..   ......+...+++|+.++.++++++++  .+++ +||+||.++  ||.... +++|+.+..
T Consensus        86 ~~~~~~D~vih~A~~~---~~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~-~V~~SS~~v--yg~~~~-~~~E~~~~~  156 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVS---DTTMLNQELVMKTNYQAFLNLLEIARS--KKAK-VIYASSAGV--YGNTKA-PNVVGKNES  156 (362)
T ss_dssp             HTTSCCSEEEECCCCC---GGGCCCHHHHHHHHTHHHHHHHHHHHH--TTCE-EEEEEEGGG--GCSCCS-SBCTTSCCC
T ss_pred             hhccCCCEEEECCccC---CccccCHHHHHHHHHHHHHHHHHHHHH--cCCc-EEEeCcHHH--hCCCCC-CCCCCCCCC
Confidence            8 78999999999964   223456788999999999999999998  6666 999999998  997766 888888754


Q ss_pred             --Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchh---hhHHHH--HHHcCCCC---CCCCcccccccHHH
Q 020254          165 --NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  233 (328)
Q Consensus       165 --~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  233 (328)
                        +.| .+|...|.....+...  ++++++||+++|||+.....   .++..+  ....+.++   +++.+.++++|++|
T Consensus       157 p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  234 (362)
T 3sxp_A          157 PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIED  234 (362)
T ss_dssp             CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHH
Confidence              346 6677667666665543  89999999999999864321   233322  33344443   56678899999999


Q ss_pred             HHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhcCcceeeecCcccCchHH-HHCC
Q 020254          234 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELG  311 (328)
Q Consensus       234 ~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG  311 (328)
                      +|++++.+++.+. .|+||+++++++++.|+++.+.+.+| +. ....|...         ........++++|+ +.||
T Consensus       235 va~ai~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~---------~~~~~~~~~d~~k~~~~lG  303 (362)
T 3sxp_A          235 VIQANVKAMKAQK-SGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY---------AFFQKHTQAHIEPTILDLD  303 (362)
T ss_dssp             HHHHHHHHTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC----------------CCCCBCCHHHHHHHC
T ss_pred             HHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC---------cCcccceecCHHHHHHHhC
Confidence            9999999999875 45999999999999999999999999 52 22334331         11234567788888 5699


Q ss_pred             CCcccccHHHHHHHhh
Q 020254          312 FPFKYRYVKDALKAIM  327 (328)
Q Consensus       312 ~~p~~~~~~~~l~~~l  327 (328)
                      |+|+++ ++++|++++
T Consensus       304 ~~p~~~-l~e~l~~~~  318 (362)
T 3sxp_A          304 YTPLYD-LESGIKDYL  318 (362)
T ss_dssp             CCCCCC-HHHHHHHHH
T ss_pred             CCCCCC-HHHHHHHHH
Confidence            999995 999999986

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.2e-40  Score=288.09  Aligned_cols=291  Identities=18%  Similarity=0.174  Sum_probs=212.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      .++|+|||||||||||++|+++|+++|++|++++|++.+...+....  ..+..+|+.|.+++.++++++|+|||+|+..
T Consensus        11 ~~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~--~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   88 (342)
T 2x4g_A           11 GAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLE--PECRVAEMLDHAGLERALRGLDGVIFSAGYY   88 (342)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGC--CEEEECCTTCHHHHHHHTTTCSEEEEC----
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCC--eEEEEecCCCHHHHHHHHcCCCEEEECCccC
Confidence            34579999999999999999999999999999999877654332100  1144579999999999999999999999964


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc--ccccCCCCCCC------ch-HHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDESSPSGN------DY-LAEV  171 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~--~~~~e~~~~~~------~y-~~k~  171 (328)
                      .   .....+...+++|+.++.+++++|.+  .+++++||+||.++  |+....  .+ +|+.+..+      .| .+|.
T Consensus        89 ~---~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~  160 (342)
T 2x4g_A           89 P---SRPRRWQEEVASALGQTNPFYAACLQ--ARVPRILYVGSAYA--MPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKW  160 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHH--HTCSCEEEECCGGG--SCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHH
T ss_pred             c---CCCCCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHh--hCcCCCCCCC-CCCCCCCccccccChHHHHHH
Confidence            2   23345677889999999999999999  68899999999998  886554  44 77776543      56 6677


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCC-cc-hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCc
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDG-GA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  249 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  249 (328)
                      ..|.....+... +++++++||+.+||+.. .. ...++.  ....+.++.-++..++++|++|+|++++.++..+..++
T Consensus       161 ~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~  237 (342)
T 2x4g_A          161 ALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVIT--AIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGE  237 (342)
T ss_dssp             HHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHH--HHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTC
T ss_pred             HHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHH--HHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCc
Confidence            777766665555 89999999999999976 21 222222  22334332115678899999999999999998766566


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----------c-------CcceeeecCcccCchHHHH-CC
Q 020254          250 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL----------G-------EGAFVVLEGQRVVPARAKE-LG  311 (328)
Q Consensus       250 ~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~-lG  311 (328)
                      +||+++++ +|+.|+++.+.+.+|.+..+.+|.+......          +       +..........++++|+++ ||
T Consensus       238 ~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  316 (342)
T 2x4g_A          238 RYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELG  316 (342)
T ss_dssp             EEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHC
T ss_pred             eEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCC
Confidence            99999999 9999999999999998743356665433211          1       1011112456778888865 89


Q ss_pred             C-CcccccHHHHHHHhh
Q 020254          312 F-PFKYRYVKDALKAIM  327 (328)
Q Consensus       312 ~-~p~~~~~~~~l~~~l  327 (328)
                      | +| + +++++|++++
T Consensus       317 ~~~p-~-~~~~~l~~~~  331 (342)
T 2x4g_A          317 FFST-T-ALDDTLLRAI  331 (342)
T ss_dssp             CCCC-S-CHHHHHHHHH
T ss_pred             CCCC-C-CHHHHHHHHH
Confidence            9 99 6 5999999876

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=8e-40  Score=289.91  Aligned_cols=290  Identities=20%  Similarity=0.261  Sum_probs=211.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..+|+|||||||||||++|++.|+++| ++|++++|++..............+..+|+.|++.+.++++++|+|||+|+.
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~  109 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY  109 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence            346899999999999999999999999 9999999987653322211111124457999999999999999999999996


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCC-CCCcEEEEecccceeecCCCccccc--CCC---C---CCCch-HH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTSETEVFD--ESS---P---SGNDY-LA  169 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~Ss~~v~~yg~~~~~~~~--e~~---~---~~~~y-~~  169 (328)
                      ... .....++...+++|+.++.+++++|++  . +++++||+||.++  ||.....+++  |+.   +   +...| .+
T Consensus       110 ~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~~V~~SS~~v--yg~~~~~~~~~~E~~~~~~~~~~~~~Y~~s  184 (377)
T 2q1s_A          110 HGN-QSSIHDPLADHENNTLTTLKLYERLKH--FKRLKKVVYSAAGCS--IAEKTFDDAKATEETDIVSLHNNDSPYSMS  184 (377)
T ss_dssp             SCH-HHHHHCHHHHHHHHTHHHHHHHHHHTT--CSSCCEEEEEEEC----------------CCCCCCCSSCCCSHHHHH
T ss_pred             cCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCCHHH--cCCCCCCCcCcccccccccccCCCCchHHH
Confidence            421 112345678899999999999999998  6 7899999999988  9976665677  776   3   34567 77


Q ss_pred             HHHHHHHHHHhcccCCCeEEEEEeceEEcCCC---------cch---hhhHHHH--HHHcCCCC---CCCCcccccccHH
Q 020254          170 EVCREWEGTALKVNKDVRLALIRIGIVLGKDG---------GAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLD  232 (328)
Q Consensus       170 k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~---------~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~  232 (328)
                      |...|.....+....+++++++||+.|||+..         ...   ..+++.+  ....+.++   +++++.++++|++
T Consensus       185 K~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~  264 (377)
T 2q1s_A          185 KIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVE  264 (377)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHH
Confidence            77777777666555689999999999999976         221   2233322  33445543   5667889999999


Q ss_pred             HHHHH-HHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeec-CcccCchHHH-
Q 020254          233 DIVNL-IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLE-GQRVVPARAK-  308 (328)
Q Consensus       233 D~a~~-~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~-  308 (328)
                      |+|++ ++.+++.+. .|+||++++++++++|+++.+.+.+|.+..+ ..|..     .++     .. ...++++|++ 
T Consensus       265 Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----~~~-----~~~~~~~d~~k~~~  333 (377)
T 2q1s_A          265 DVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNNTELDRLPKR-----PWD-----NSGKRFGSPEKARR  333 (377)
T ss_dssp             HHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC-----GGG-----CC-CCCCCCHHHHH
T ss_pred             HHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC-----ccc-----cccccccCHHHHHH
Confidence            99999 999998866 4599999999999999999999999976322 33310     011     12 5677888885 


Q ss_pred             HCCCCcccccHHHHHHHhh
Q 020254          309 ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       309 ~lG~~p~~~~~~~~l~~~l  327 (328)
                      .|||+|+++ ++++|++++
T Consensus       334 ~lG~~p~~~-l~e~l~~~~  351 (377)
T 2q1s_A          334 ELGFSADVS-IDDGLRKTI  351 (377)
T ss_dssp             HHCCCCCCC-HHHHHHHHH
T ss_pred             HcCCCCCCC-HHHHHHHHH
Confidence            599999995 999999876

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2.4e-39  Score=284.38  Aligned_cols=294  Identities=17%  Similarity=0.133  Sum_probs=219.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---------CCccccCceeecCChhhHhhcCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDCIQGST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~d   91 (328)
                      .++|+|||||||||||++|++.|+++|++|++++|++.........         .....+..+|+.|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            3468999999999999999999999999999999976532110000         0001144578999999999999999


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-H
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L  168 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~  168 (328)
                      +|||+|+.... .....++...+++|+.++.++++++.+  .+++++||+||.++  |+.....+++|+.+..  ..| .
T Consensus       105 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~E~~~~~~~~~Y~~  179 (352)
T 1sb8_A          105 YVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASSST--YGDHPGLPKVEDTIGKPLSPYAV  179 (352)
T ss_dssp             EEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCSHHHH
T ss_pred             EEEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHh--cCCCCCCCCCCCCCCCCCChhHH
Confidence            99999996421 112345678889999999999999999  68899999999999  9987767788888743  456 6


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...|.....+....+++++++||+.+||+.....   ..+++.+  ....+.++   +++++.++++|++|+|++++.
T Consensus       180 sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~  259 (352)
T 1sb8_A          180 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL  259 (352)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence            677777776666555689999999999999975321   1223222  33445553   667888999999999999999


Q ss_pred             HhhCC-C-CCceEEecCCCccCHHHHHHHHHHHh---CCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCc
Q 020254          241 ALSNP-S-YRGVINGTAPNPVRLAEMCDHLGNVL---GRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPF  314 (328)
Q Consensus       241 ~~~~~-~-~~g~~~i~~~~~~~~~e~~~~i~~~~---g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p  314 (328)
                      ++... . .+++||+++++++|+.|+++.+.+.+   |.+.... |.+      ............++++|++ .|||+|
T Consensus       260 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~-~~~------~~~~~~~~~~~~~d~~k~~~~lG~~p  332 (352)
T 1sb8_A          260 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE-PVY------RDFREGDVRHSLADISKAAKLLGYAP  332 (352)
T ss_dssp             HHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC-CEE------ECCCTTCCSBCCBCCHHHHHHTCCCC
T ss_pred             HHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC-cee------cCCCccchhhccCCHHHHHHHhCCCC
Confidence            98863 2 46699999999999999999999999   8763321 110      0000001234567788886 599999


Q ss_pred             ccccHHHHHHHhh
Q 020254          315 KYRYVKDALKAIM  327 (328)
Q Consensus       315 ~~~~~~~~l~~~l  327 (328)
                      +++ ++++|++++
T Consensus       333 ~~~-~~e~l~~~~  344 (352)
T 1sb8_A          333 KYD-VSAGVALAM  344 (352)
T ss_dssp             CCC-HHHHHHHHH
T ss_pred             CCC-HHHHHHHHH
Confidence            985 999999876

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=6.3e-40  Score=283.26  Aligned_cols=284  Identities=21%  Similarity=0.262  Sum_probs=214.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+||||||+||||++++++|+++|++|++++|...........  ...+..+|+.|++.+.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPK--GVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCT--TCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhccc--CeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            5899999999999999999999999999999854432221111  01144679999999998887  8999999998642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc-cceeecC-CCcccccCCCCC--CCch-HHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT-ALGYYGT-SETEVFDESSPS--GNDY-LAEVCREWE  176 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~-~v~~yg~-~~~~~~~e~~~~--~~~y-~~k~~~~~~  176 (328)
                       ......++...+++|+.++.++++++.+  .+++++|++||. ++  ||. ....+.+|+.+.  ...| .+|...|..
T Consensus        79 -~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~~--~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  153 (311)
T 2p5y_A           79 -VKVSVEDPVLDFEVNLLGGLNLLEACRQ--YGVEKLVFASTGGAI--YGEVPEGERAEETWPPRPKSPYAASKAAFEHY  153 (311)
T ss_dssp             -HHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEHHHH--HCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             -chhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCChhh--cCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence             1122345677899999999999999998  678899999998 77  886 444567777764  3467 778777777


Q ss_pred             HHHhcccCCCeEEEEEeceEEcCCCcch--hhhHHHH--HHHcCCCC--------CCCCcccccccHHHHHHHHHHHhhC
Q 020254          177 GTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGGPL--------GSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       177 ~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~--~~~~~~~~--------~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      ...+....+++++++||+++|||+....  ..+++.+  ....+.++        +++.+.++++|++|+|++++.++..
T Consensus       154 ~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          154 LSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             HHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence            7666555689999999999999975321  1223322  22344442        5567789999999999999999986


Q ss_pred             CCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHH
Q 020254          245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  323 (328)
Q Consensus       245 ~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l  323 (328)
                      +  +++||+++++++|++|+++.+.+.+|.+..+ ..|..     .++     .....++++|+++|||+|+++ ++++|
T Consensus       234 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~lg~~p~~~-~~~~l  300 (311)
T 2p5y_A          234 L--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR-----PGD-----LERSVLSPLKLMAHGWRPKVG-FQEGI  300 (311)
T ss_dssp             C--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC-----TTC-----CSBCCBCCHHHHTTTCCCSSC-HHHHH
T ss_pred             C--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-----ccc-----hhhccCCHHHHHHCCCCCCCC-HHHHH
Confidence            4  6799999999999999999999999976322 12211     111     134567788886699999994 99999


Q ss_pred             HHhh
Q 020254          324 KAIM  327 (328)
Q Consensus       324 ~~~l  327 (328)
                      ++++
T Consensus       301 ~~~~  304 (311)
T 2p5y_A          301 RLTV  304 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1e-39  Score=283.14  Aligned_cols=289  Identities=16%  Similarity=0.111  Sum_probs=216.9

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLA   97 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a   97 (328)
                      -.++|+|||||||||||++|++.|+++|++|++++|++.. ..+     ...+..+|+.|++.+.+++++  +|+|||+|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP-----NVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT-----TEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc-----eeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            3456899999999999999999999999999999998765 221     112445799999999998875  99999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC--CcccccCCCCC--CCch-HHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--ETEVFDESSPS--GNDY-LAEVC  172 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~--~~~~~~e~~~~--~~~y-~~k~~  172 (328)
                      +.... ......+...+++|+.++.++++++.+. .+++++||+||.++  ||..  ...+++|+.+.  ...| .+|..
T Consensus        83 ~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~v--~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~  158 (321)
T 2pk3_A           83 AKSSV-KDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSSEE--YGMILPEESPVSEENQLRPMSPYGVSKAS  158 (321)
T ss_dssp             SCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEEGGG--TBSCCGGGCSBCTTSCCBCCSHHHHHHHH
T ss_pred             cccch-hhhhhcHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEccHHh--cCCCCCCCCCCCCCCCCCCCCccHHHHHH
Confidence            97421 1122356789999999999999999762 25789999999998  9876  56678888764  3456 77777


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhhHHHHHH-HcC--CC---CCCCCcccccccHHHHHHHHHHHhh
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLFMM-FAG--GP---LGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~-~~~--~~---~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      .|.....+..+.+++++++||+++||++....   ..++..... ..+  .+   ++++...++++|++|+|++++.++.
T Consensus       159 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  238 (321)
T 2pk3_A          159 VGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ  238 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHh
Confidence            77776666555689999999999999986431   122222111 114  23   2667788999999999999999998


Q ss_pred             CCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHH
Q 020254          244 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  321 (328)
Q Consensus       244 ~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~  321 (328)
                      .+..+++||+++++++++.|+++.+.+.+|.+..+ ..|..        ..........++++|+++ |||+|+++ +++
T Consensus       239 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------~~~~~~~~~~~d~~k~~~~lG~~p~~~-~~e  309 (321)
T 2pk3_A          239 YGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ--------LRPSEVPTLIGSNKRLKDSTGWKPRIP-LEK  309 (321)
T ss_dssp             HCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG--------CCSSCCSBCCBCCHHHHHHHCCCCCSC-HHH
T ss_pred             CCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc--------CCCcccchhccCHHHHHHHcCCCcCCC-HHH
Confidence            76556799999999999999999999999976322 22321        011112446778888865 89999994 999


Q ss_pred             HHHHhh
Q 020254          322 ALKAIM  327 (328)
Q Consensus       322 ~l~~~l  327 (328)
                      +|++++
T Consensus       310 ~l~~~~  315 (321)
T 2pk3_A          310 SLFEIL  315 (321)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999876

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4e-39  Score=280.44  Aligned_cols=287  Identities=18%  Similarity=0.221  Sum_probs=209.6

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEE
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN   95 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   95 (328)
                      +.....|+|||||||||||++|+++|+++|++|++++|+...............+..+|+.|.+++.++++  ++|+|||
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            34445689999999999999999999999999999999765433211111111244579999999999998  9999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcc--cccCCCCCCCch-HHHHH
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE--VFDESSPSGNDY-LAEVC  172 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~--~~~e~~~~~~~y-~~k~~  172 (328)
                      +|+.....  ...++.  +++|+.++.++++++.+  .+++++|++||.++  |+.....  +++|+..+...| .+|..
T Consensus        95 ~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~--~~~~~~~~~~~~E~~~~~~~Y~~sK~~  166 (330)
T 2pzm_A           95 SAAAYKDP--DDWAED--AATNVQGSINVAKAASK--AGVKRLLNFQTALC--YGRPATVPIPIDSPTAPFTSYGISKTA  166 (330)
T ss_dssp             CCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--HTCSEEEEEEEGGG--GCSCSSSSBCTTCCCCCCSHHHHHHHH
T ss_pred             CCccCCCc--cccChh--HHHHHHHHHHHHHHHHH--cCCCEEEEecCHHH--hCCCccCCCCcCCCCCCCChHHHHHHH
Confidence            99975322  333344  89999999999999998  67889999999998  8865443  677766344566 66666


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCC-CCCCCcccccccHHHHHH-HHHHHhhCCCCC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP-LGSGQQWFSWIHLDDIVN-LIYEALSNPSYR  248 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~i~v~D~a~-~~~~~~~~~~~~  248 (328)
                      .|.....+    +++++++||+++|||+..  ..+...+  ....+.. ++++. .++++|++|+|+ +++.++..+. +
T Consensus       167 ~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~-g  238 (330)
T 2pzm_A          167 GEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP-T  238 (330)
T ss_dssp             HHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC-C
T ss_pred             HHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC-C
Confidence            55554433    789999999999999851  1222221  2223333 24445 789999999999 9999998766 6


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          249 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       249 g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      ++||+++++++++.|+++.+.+.+|.+.....|.+.      +......+..++.+.++++|||+|++ +++++|++++
T Consensus       239 ~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~d~~k~~~~~l~~lG~~p~~-~~~~~l~~~~  310 (330)
T 2pzm_A          239 GVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVA------PGADDVPSVVLDPSKTETEFGWKAKV-DFKDTITGQL  310 (330)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHTCCCSSCCCEEC------CCTTSCSEECBCCHHHHHHHCCCCCC-CHHHHHHHHH
T ss_pred             CEEEeCCCCCCCHHHHHHHHHHHhCCCCceeCCCCc------chhhccCCHHHHhhchHHHcCCcccC-CHHHHHHHHH
Confidence            799999999999999999999999977222223211      12223344445544555789999998 4999999876

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1e-39  Score=283.21  Aligned_cols=274  Identities=13%  Similarity=0.151  Sum_probs=211.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  100 (328)
                      +|+|||||||||||++|+++|+++|++|++++|+.                .+|+.|.+++.++++  ++|+|||+|+..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~   66 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAKV   66 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------cCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence            47899999999999999999999999999988752                268889999999998  999999999974


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC----CCCC---ch-HHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAEVC  172 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~----~~~~---~y-~~k~~  172 (328)
                      ........++...+++|+.++.++++++.+  .+++++||+||.++  ||.....+++|++    +..+   .| .+|..
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  142 (321)
T 1e6u_A           67 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSSCI--YPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  142 (321)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             CCcchhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccHHH--cCCCCCCCcCccccccCCCCCCCCccHHHHHH
Confidence            221123445678899999999999999999  68899999999998  9977666777775    3332   46 66777


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcc-------hhhhHHHHHHH--cC-CC---CCCCCcccccccHHHHHHHHH
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLFMMF--AG-GP---LGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~--~~-~~---~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .|.....+....+++++++||+.+||++...       ...++..+...  .+ .+   .++++..++++|++|+|++++
T Consensus       143 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~  222 (321)
T 1e6u_A          143 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  222 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHH
Confidence            7766666555568999999999999997632       12222222111  23 33   267788999999999999999


Q ss_pred             HHhhCCCC---------CceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHH
Q 020254          240 EALSNPSY---------RGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE  309 (328)
Q Consensus       240 ~~~~~~~~---------~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (328)
                      .+++.+..         +++||+++++++++.|+++.+.+.+|.+..+ ..|..          ........++++|+++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~d~~k~~~  292 (321)
T 1e6u_A          223 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK----------PDGTPRKLLDVTRLHQ  292 (321)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS----------CCCCSBCCBCCHHHHH
T ss_pred             HHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC----------CCCcccccCCHHHHHh
Confidence            99987653         4799999999999999999999999976322 11110          0112345678888877


Q ss_pred             CCCCcccccHHHHHHHhh
Q 020254          310 LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       310 lG~~p~~~~~~~~l~~~l  327 (328)
                      |||+|+++ ++++|++++
T Consensus       293 lG~~p~~~-~~~~l~~~~  309 (321)
T 1e6u_A          293 LGWYHEIS-LEAGLASTY  309 (321)
T ss_dssp             TTCCCCCC-HHHHHHHHH
T ss_pred             cCCccCCc-HHHHHHHHH
Confidence            99999985 999999876

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-39  Score=282.52  Aligned_cols=288  Identities=19%  Similarity=0.254  Sum_probs=216.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  100 (328)
                      ||+|||||||||||++|+++|+++|++|++++|+..........  ...+..+|+.|.+.+.++++  ++|+|||+|+..
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~   78 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE--GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS   78 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCT--TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCC--CcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence            57999999999999999999999999999999976543322211  11244579999999999998  899999999964


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG  177 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~  177 (328)
                      .. .....++...+++|+.++.++++++++  .+++++||+||.++  ||.....+++|+++..  ..| .+|...|...
T Consensus        79 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  153 (330)
T 2c20_A           79 LV-GVSMEKPLQYYNNNVYGALCLLEVMDE--FKVDKFIFSSTAAT--YGEVDVDLITEETMTNPTNTYGETKLAIEKML  153 (330)
T ss_dssp             CH-HHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--GCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             Cc-cccccCHHHHHHHHhHHHHHHHHHHHH--cCCCEEEEeCCcee--eCCCCCCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence            21 112345678889999999999999998  68899999999998  9977667888888753  456 7777777777


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCc--------chhhhHHHH-HHHcC--CCC---C------CCCcccccccHHHHHHH
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF-MMFAG--GPL---G------SGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~--------~~~~~~~~~-~~~~~--~~~---~------~~~~~~~~i~v~D~a~~  237 (328)
                      ..+..+.+++++++||+++||++..        ....+++.+ ....+  .++   +      ++++.++++|++|+|++
T Consensus       154 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a  233 (330)
T 2c20_A          154 HWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAA  233 (330)
T ss_dssp             HHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHH
T ss_pred             HHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHH
Confidence            7666667999999999999999631        112344433 22222  222   2      56788999999999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHH-HCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGF  312 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~  312 (328)
                      ++.+++.+.   .+++||+++++++|+.|+++.+.+.+|.+..+ ..|..     .++     .....++++|++ .|||
T Consensus       234 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~~lG~  303 (330)
T 2c20_A          234 HFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR-----AGD-----PARLVASSQKAKEKLGW  303 (330)
T ss_dssp             HHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC-----SSC-----CSEECBCCHHHHHHHCC
T ss_pred             HHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----CCc-----ccccccCHHHHHHHhCC
Confidence            999987542   25799999999999999999999999976322 11210     111     123456778885 5999


Q ss_pred             CcccccHHHHHHHhh
Q 020254          313 PFKYRYVKDALKAIM  327 (328)
Q Consensus       313 ~p~~~~~~~~l~~~l  327 (328)
                      +|++++++++|++++
T Consensus       304 ~p~~~~l~~~l~~~~  318 (330)
T 2c20_A          304 DPRYVNVKTIIEHAW  318 (330)
T ss_dssp             CCSCCCHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHH
Confidence            999945999999876

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=2e-39  Score=280.79  Aligned_cols=280  Identities=16%  Similarity=0.145  Sum_probs=212.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~   98 (328)
                      .+||+|||||||||||++|+++|+++|+      +....... ..      ...+|+.|++.+.+++++  +|+|||+|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~~~-~~------~~~~D~~d~~~~~~~~~~~~~d~Vih~A~   70 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGEDWVF-VS------SKDADLTDTAQTRALFEKVQPTHVIHLAA   70 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCEEEE-CC------TTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccccccc-cC------ceecccCCHHHHHHHHhhcCCCEEEECce
Confidence            3568999999999999999999999998      22111111 11      445799999999999975  999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC----CCCC---ch-HHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAE  170 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~----~~~~---~y-~~k  170 (328)
                      ..........++...++.|+.++.+++++|++  .+++++||+||.++  ||.....+++|+.    ++.+   .| .+|
T Consensus        71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  146 (319)
T 4b8w_A           71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE--VGARKVVSCLSTCI--FPDKTTYPIDETMIHNGPPHNSNFGYSYAK  146 (319)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCGGG--SCSSCCSSBCGGGGGBSCCCSSSHHHHHHH
T ss_pred             ecccccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEEcchhh--cCCCCCCCccccccccCCCCCCcchHHHHH
Confidence            74322223455678899999999999999999  68899999999998  9988777888875    3332   36 667


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH--H----HHcCCCC---CCCCcccccccHHHHHHHH
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--M----MFAGGPL---GSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~----~~~~~~~---~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...|.....+....+++++++||+++|||+...   ...+++.+  .    ...+.++   +++++.++++|++|+|+++
T Consensus       147 ~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  226 (319)
T 4b8w_A          147 RMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF  226 (319)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence            777777766666679999999999999997632   11222222  1    3455553   6788999999999999999


Q ss_pred             HHHhhCCC--CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcc
Q 020254          239 YEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  315 (328)
Q Consensus       239 ~~~~~~~~--~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~  315 (328)
                      +.++..+.  .+++||+++++++|+.|+++.+.+.+|.+..+.....         .........++++|+++ |||.|.
T Consensus       227 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lg~~p~  297 (319)
T 4b8w_A          227 IWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTT---------KSDGQFKKTASNSKLRTYLPDFRF  297 (319)
T ss_dssp             HHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETT---------SCCCCSCCCBCCHHHHHHCTTCCC
T ss_pred             HHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCC---------CCcCcccccCCHHHHHHhcCCCCC
Confidence            99998744  3459999999999999999999999997643221110         01111234678888876 999999


Q ss_pred             cccHHHHHHHhh
Q 020254          316 YRYVKDALKAIM  327 (328)
Q Consensus       316 ~~~~~~~l~~~l  327 (328)
                      ++ ++++|++++
T Consensus       298 ~~-~~~~l~~~~  308 (319)
T 4b8w_A          298 TP-FKQAVKETC  308 (319)
T ss_dssp             CC-HHHHHHHHH
T ss_pred             CC-HHHHHHHHH
Confidence            85 999999986

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=2e-39  Score=276.94  Aligned_cols=268  Identities=15%  Similarity=0.110  Sum_probs=209.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |+|||||||||||+++++.|+++|++|++++|.                 .+|+.|.+.+.++++  ++|+|||+|+...
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~   68 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTK   68 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            599999999999999999999999999999992                 268899999999997  7999999999752


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC--ch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~  178 (328)
                       ......++...+++|+.++.++++++++  .++ ++||+||.++  |+.....+++|+++..+  .| .+|...|....
T Consensus        69 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~SS~~v--y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  142 (287)
T 3sc6_A           69 -VDQAEKERDLAYVINAIGARNVAVASQL--VGA-KLVYISTDYV--FQGDRPEGYDEFHNPAPINIYGASKYAGEQFVK  142 (287)
T ss_dssp             -HHHHTTCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             -hHHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchhhh--cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence             1222246788999999999999999998  566 6999999998  99887788999887544  45 56665555554


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-H-HHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCCceEEecC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  255 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~  255 (328)
                      .+    ..+++++||+.+||++...   ++..+ . ...+.++ ..+++.++++|++|+|++++.++.++. +|+||+++
T Consensus       143 ~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~  214 (287)
T 3sc6_A          143 EL----HNKYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVSN  214 (287)
T ss_dssp             HH----CSSEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECCC
T ss_pred             Hh----CCCcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEcC
Confidence            43    3478999999999996532   22222 2 2234443 223578999999999999999999877 78999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhhC
Q 020254          256 PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       256 ~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      ++++++.|+++.+.+.+|.+.. .++|........     .......++++|+++|||+|.++ ++++|+++++
T Consensus       215 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~k~~~lg~~p~~~-~~~~l~~~~~  282 (287)
T 3sc6_A          215 TGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAA-----ARPKYSIFQHNMLRLNGFLQMPS-WEEGLERFFI  282 (287)
T ss_dssp             BSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSS-----CCCSBCCBCCHHHHHTTCCCCCB-HHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHcCCCcceeeeehhhcCccc-----CCCCcccccHHHHHhhCCCCCcc-HHHHHHHHHH
Confidence            9999999999999999998733 345554332111     11234567888899999999985 9999999863

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=2.4e-38  Score=278.48  Aligned_cols=284  Identities=13%  Similarity=0.152  Sum_probs=216.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCccc-ccCCCCCccccCceeecCChhhHhhcC-----CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi   94 (328)
                      +.|+|||||||||||++|+++|+++| ++|++++|++.... ......    ....|+.|.+.++++++     ++|+||
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~~d~Vi  120 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL----NIADYMDKEDFLIQIMAGEEFGDVEAIF  120 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTS----CCSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCc----eEeeecCcHHHHHHHHhhcccCCCCEEE
Confidence            34789999999999999999999999 99999999876531 111111    14579999999988886     599999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEV  171 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~  171 (328)
                      |+|+....   ...++...+++|+.++.++++++.+  .++ ++||+||.++  ||.....+++|+.+..  ..| .+|.
T Consensus       121 h~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~--~~~-r~V~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK~  192 (357)
T 2x6t_A          121 HEGACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVFGYSKF  192 (357)
T ss_dssp             ECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GCSCSSCCCSSGGGCCCSSHHHHHHH
T ss_pred             ECCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEcchHH--hCCCCCCCcCCcCCCCCCChhHHHHH
Confidence            99997532   3345678899999999999999998  677 9999999998  9977666778877643  456 7787


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH--HHHcCCCC---CCCCc-ccccccHHHHHHHHHHHh
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~i~v~D~a~~~~~~~  242 (328)
                      ..|.....+....+++++++||+.|||++...   ...++..+  ....+.++   +++.. .++++|++|+|++++.++
T Consensus       193 ~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~  272 (357)
T 2x6t_A          193 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL  272 (357)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHH
Confidence            77777777766678999999999999997532   12233322  23344443   56667 889999999999999999


Q ss_pred             hCCCCCceEEecCCCccCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCC-CcccccH
Q 020254          243 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-PFKYRYV  319 (328)
Q Consensus       243 ~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~p~~~~~  319 (328)
                      +.+. +++||+++++++++.|+++.+.+.+|.+.  .++.|.+.        .........++++|+++||| .|.+ ++
T Consensus       273 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~k~~~lG~~~~~~-~l  342 (357)
T 2x6t_A          273 ENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRAAGYDKPFK-TV  342 (357)
T ss_dssp             HHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG--------TTSCCSBCCCCCHHHHHTTCCCCCC-CH
T ss_pred             hcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc--------ccccccccccCHHHHHHcCCCCCCC-CH
Confidence            8776 77999999999999999999999999761  12333321        01122346677888888999 7777 49


Q ss_pred             HHHHHHhh
Q 020254          320 KDALKAIM  327 (328)
Q Consensus       320 ~~~l~~~l  327 (328)
                      +++|++++
T Consensus       343 ~e~l~~~~  350 (357)
T 2x6t_A          343 AEGVTEYM  350 (357)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999876

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=8.7e-39  Score=280.41  Aligned_cols=289  Identities=16%  Similarity=0.153  Sum_probs=213.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcc--cccCCC-CCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKA--ELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ||+|||||||||||++|+++|+++  |++|++++|+....  ...... .....+..+|+.|++.+.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            579999999999999999999998  89999999975321  111100 0111234578999999999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc------------ccccCCCCC--
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET------------EVFDESSPS--  163 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~------------~~~~e~~~~--  163 (328)
                      +... ......++...+++|+.++.++++++.+  .++ ++||+||.++  ||....            .+++|+++.  
T Consensus        84 ~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~-~~v~~SS~~v--yg~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (348)
T 1oc2_A           84 AESH-NDNSLNDPSPFIHTNFIGTYTLLEAARK--YDI-RFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETNYNP  157 (348)
T ss_dssp             SCCC-HHHHHHCCHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             cccC-ccchhhCHHHHHHHHHHHHHHHHHHHHH--hCC-eEEEecccce--eCCCcccccccccccccCCCcCCCCCCCC
Confidence            9642 1112234567889999999999999998  566 9999999998  886432            567777664  


Q ss_pred             CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCC---CCCCcccccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL---GSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~i~v~D~a~~  237 (328)
                      .+.| .+|...|.....+....+++++++||+.+||+..... .+++. + ....+.++   +++...++++|++|+|++
T Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  236 (348)
T 1oc2_A          158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG  236 (348)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHH
Confidence            3456 6777777777666555689999999999999975321 22222 1 23345443   667788999999999999


Q ss_pred             HHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcc
Q 020254          238 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  315 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~  315 (328)
                      ++.++..+..+++||++++.++++.|+++.+.+.+|.+.. +...        .. .........++++|+++ |||+|+
T Consensus       237 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------~~-~~~~~~~~~~d~~k~~~~lG~~p~  307 (348)
T 1oc2_A          237 VWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHV--------TD-RAGHDLRYAIDASKLRDELGWTPQ  307 (348)
T ss_dssp             HHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEE--------CC-CTTCCCBCCBCCHHHHHHHCCCCS
T ss_pred             HHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccC--------CC-CCCcccccccCHHHHHHHcCCCCC
Confidence            9999987655569999999999999999999999997632 1110        00 00011223577888865 999999


Q ss_pred             cccHHHHHHHhh
Q 020254          316 YRYVKDALKAIM  327 (328)
Q Consensus       316 ~~~~~~~l~~~l  327 (328)
                      +++++++|++++
T Consensus       308 ~~~~~~~l~~~~  319 (348)
T 1oc2_A          308 FTDFSEGLEETI  319 (348)
T ss_dssp             CCCHHHHHHHHH
T ss_pred             CCcHHHHHHHHH
Confidence            955999999876

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=7.1e-39  Score=283.94  Aligned_cols=287  Identities=18%  Similarity=0.226  Sum_probs=216.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      +||+|||||||||||++|+++|+++|++|++++|++.........  ...+..+|+.|.+++.++++++|+|||+|+...
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF--CDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGT--CSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccC--CceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            578999999999999999999999999999999987654322111  011445799999999999999999999999642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc-----ccccCCC--C--CCCch-HHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-----EVFDESS--P--SGNDY-LAEV  171 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~-----~~~~e~~--~--~~~~y-~~k~  171 (328)
                      ...+....+...+++|+.++.++++++++  .+++++||+||.++  |+....     .+++|++  +  +...| .+|.
T Consensus       106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~~V~~SS~~v--~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          106 GMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACI--YPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGG--SCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeehhe--eCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            21111345778899999999999999998  68889999999988  885322     3456654  2  34567 7777


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcchh---hhHHHH--HHHcCCC----CCCCCcccccccHHHHHHHHHHHh
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~--~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      ..|.....+....+++++++||+.+||++.....   .+...+  ....+.+    .+++++.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            7777766665556899999999999999753211   122222  2334544    267778899999999999999999


Q ss_pred             hCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHH
Q 020254          243 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVK  320 (328)
Q Consensus       243 ~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~  320 (328)
                      +.+ .+++||+++++++++.|+++.+.+.+|.+..+ ..|.+.     +      .....++++|++ .|||+|+++ ++
T Consensus       262 ~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----~------~~~~~~d~~k~~~~lG~~p~~~-l~  328 (379)
T 2c5a_A          262 KSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-----G------VRGRNSDNNLIKEKLGWAPNMR-LK  328 (379)
T ss_dssp             HSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-----C------CSBCEECCHHHHHHHSCCCCCC-HH
T ss_pred             hcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-----C------cccccCCHHHHHHHhCCCCCCC-HH
Confidence            876 46799999999999999999999999976322 223210     0      123456778886 489999995 99


Q ss_pred             HHHHHhh
Q 020254          321 DALKAIM  327 (328)
Q Consensus       321 ~~l~~~l  327 (328)
                      ++|++++
T Consensus       329 e~l~~~~  335 (379)
T 2c5a_A          329 EGLRITY  335 (379)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999876

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.3e-38  Score=278.07  Aligned_cols=288  Identities=22%  Similarity=0.250  Sum_probs=214.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC---C---CeEEEEecCCCc--ccccC--CCCCccccCceeecCChhhHhhcCCCcEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD---N---HQVRVLTRSRSK--AELIF--PGKKTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~--~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      |+|||||||||||++|+++|+++   |   ++|++++|+...  ...+.  .......+..+|+.|++.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            68999999999999999999997   8   999999997532  11111  00011123457899999999999999999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHH
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAE  170 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k  170 (328)
                      ||+|+.... .....++...+++|+.++.++++++.+  .+++++||+||.++  ||.....+++|+.+.  ...| .+|
T Consensus        81 ih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTNQV--YGSIDSGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEecchHH--hCCCCCCCCCCCCCCCCCCchHHHH
Confidence            999996421 112234567889999999999999999  67889999999998  987666677887764  3456 777


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCC
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ...|.....+....+++++++||+.+||+..... .+++.+  ....+.++   +++++.++++|++|+|++++.++..+
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  234 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence            7777776666555689999999999999975321 222222  23344443   66778899999999999999999876


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL  323 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l  323 (328)
                      ..+++||+++++++++.|+++.+.+.+|.+.. +...        .. .........++++|+++ |||+|+++ ++++|
T Consensus       235 ~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------~~-~~~~~~~~~~d~~k~~~~lG~~p~~~-~~e~l  304 (337)
T 1r6d_A          235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV--------AD-RKGHDLRYSLDGGKIERELGYRPQVS-FADGL  304 (337)
T ss_dssp             CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEE--------CC-CTTCCCBCCBCCHHHHHHHCCCCCSC-HHHHH
T ss_pred             CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceec--------CC-CCCCcceeecCHHHHHHHcCCCCCCC-HHHHH
Confidence            55669999999999999999999999997621 1100        00 00001123467888864 89999996 99999


Q ss_pred             HHhh
Q 020254          324 KAIM  327 (328)
Q Consensus       324 ~~~l  327 (328)
                      ++++
T Consensus       305 ~~~~  308 (337)
T 1r6d_A          305 ARTV  308 (337)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.2e-38  Score=278.19  Aligned_cols=289  Identities=17%  Similarity=0.167  Sum_probs=212.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCc--ccccCCC--CCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      +|+|||||||||||++|+++|+++|  ++|++++|+...  ...+...  .....+..+|+.|.+.+.+++.++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            4789999999999999999999986  899999997521  1111110  011123457899999999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVC  172 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~  172 (328)
                      |+... ......++...+++|+.++.++++++.+  .+. +++||+||.++  ||.....+++|+.+.  .+.| .+|..
T Consensus        83 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (336)
T 2hun_A           83 AAESH-VDRSISSPEIFLHSNVIGTYTLLESIRR--ENPEVRFVHVSTDEV--YGDILKGSFTENDRLMPSSPYSATKAA  157 (336)
T ss_dssp             CCCCC-HHHHHHCTHHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCCCSSSCBCTTBCCCCCSHHHHHHHH
T ss_pred             CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEeccHHH--HCCCCCCCcCCCCCCCCCCccHHHHHH
Confidence            99642 1122345577899999999999999998  443 69999999998  987666678887764  3467 77877


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                      .|.....+..+.+++++++||+.+||+..... .+++.+  ....+.++   +++.+.++++|++|+|++++.+++.+..
T Consensus       158 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  236 (336)
T 2hun_A          158 SDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES  236 (336)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT
T ss_pred             HHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC
Confidence            77777766666799999999999999975321 222222  23344442   5677889999999999999999987655


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHH
Q 020254          248 RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA  325 (328)
Q Consensus       248 ~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~  325 (328)
                      +++||+++++++++.|+++.+.+.+|.+.+ +...        .. .........++++|+++ |||+|+++ ++++|++
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------~~-~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~l~~  306 (336)
T 2hun_A          237 REIYNISAGEEKTNLEVVKIILRLMGKGEELIELV--------ED-RPGHDLRYSLDSWKITRDLKWRPKYT-FDEGIKK  306 (336)
T ss_dssp             TCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEE--------CC-CTTCCCCCCBCCHHHHHHHCCCCSSC-HHHHHHH
T ss_pred             CCEEEeCCCCcccHHHHHHHHHHHhCCCccccccc--------CC-CCCchhhhcCCHHHHHHHhCCCCCCC-HHHHHHH
Confidence            669999999999999999999999997632 1110        00 00001224567888865 99999995 9999998


Q ss_pred             hh
Q 020254          326 IM  327 (328)
Q Consensus       326 ~l  327 (328)
                      ++
T Consensus       307 ~~  308 (336)
T 2hun_A          307 TI  308 (336)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-38  Score=273.46  Aligned_cols=281  Identities=14%  Similarity=0.165  Sum_probs=202.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccc-cCCCCCccccCceeecCChhhHhhcCC-----CcEEEECC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQG-----STAVVNLA   97 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~d~vi~~a   97 (328)
                      +|||||||||||++|+++|+++| ++|++++|++..... .....    ....|+.|.+.+++++++     +|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL----NIADYMDKEDFLIQIMAGEEFGDVEAIFHEG   76 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS----CCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcc----eeccccccHHHHHHHHhccccCCCcEEEECc
Confidence            59999999999999999999999 999999998764311 01110    134799999999888875     99999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCRE  174 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~  174 (328)
                      +....   ...++...+++|+.++.++++++.+  .++ ++||+||.++  ||.....+++|+.+..  ..| .+|...|
T Consensus        77 ~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  148 (310)
T 1eq2_A           77 ACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVYGYSKFLFD  148 (310)
T ss_dssp             SCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GTTCCSCBCSSGGGCCCSSHHHHHHHHHH
T ss_pred             ccccC---cccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeeHHH--hCCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence            97532   3345678899999999999999998  677 9999999998  9977666778877643  456 7787777


Q ss_pred             HHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH--HHHcCCCC---CCCCc-ccccccHHHHHHHHHHHhhCC
Q 020254          175 WEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       175 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      .....+....+++++++||+.+||++...   ...++..+  ....+.++   ++++. .++++|++|+|++++.+++.+
T Consensus       149 ~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence            77777766679999999999999997642   12233322  22344432   56677 899999999999999999887


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHHHhCCC--CCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCC-CcccccHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRP--SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-PFKYRYVKDA  322 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~p~~~~~~~~  322 (328)
                      . +++||+++++++|+.|+++.+.+.+|.+  ..++.|.+..        .........+++|+++||| .|.+ +++++
T Consensus       229 ~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~lG~~~~~~-~l~~~  298 (310)
T 1eq2_A          229 V-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRAAGYDKPFK-TVAEG  298 (310)
T ss_dssp             C-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCC-CHHHH
T ss_pred             C-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhh--------cccccccccchHHHHhcCCCCCCC-CHHHH
Confidence            6 7799999999999999999999999976  1122232111        1122346677888888999 7777 49999


Q ss_pred             HHHhh
Q 020254          323 LKAIM  327 (328)
Q Consensus       323 l~~~l  327 (328)
                      |++++
T Consensus       299 l~~~~  303 (310)
T 1eq2_A          299 VTEYM  303 (310)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99876

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=6.1e-39  Score=282.37  Aligned_cols=292  Identities=18%  Similarity=0.201  Sum_probs=214.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCC--CcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~   96 (328)
                      .+|+|||||||||||++|+++|+++|++|++++|++........   ......+..+|+.|++.+.+++++  +|+|||+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence            45799999999999999999999999999999998765432211   001112445799999999988875  8999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCc-ccccCCCCC--CCch-HHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSET-EVFDESSPS--GNDY-LAEV  171 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~-~~~~e~~~~--~~~y-~~k~  171 (328)
                      |+.. ........+...+++|+.++.++++++.+  .+ ++++||+||.++  ||.... .+++|+.+.  ...| .+|.
T Consensus        88 A~~~-~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~~v--yg~~~~~~~~~E~~~~~~~~~Y~~sK~  162 (357)
T 1rkx_A           88 AAQP-LVRLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKC--YDNKEWIWGYRENEAMGGYDPYSNSKG  162 (357)
T ss_dssp             CSCC-CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGG--BCCCCSSSCBCTTSCBCCSSHHHHHHH
T ss_pred             CCCc-ccccchhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEecCHHH--hCCCCcCCCCCCCCCCCCCCccHHHHH
Confidence            9963 11223455678899999999999999998  44 789999999998  986553 356776653  4457 7777


Q ss_pred             HHHHHHHHhccc---------CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCC--CCCCCcccccccHHHHHHHH
Q 020254          172 CREWEGTALKVN---------KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP--LGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       172 ~~~~~~~~~~~~---------~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..|.....+...         .+++++++||+.+||++......++..+  ....+.+  +..++..++++|++|+|+++
T Consensus       163 ~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~  242 (357)
T 1rkx_A          163 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGY  242 (357)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHH
Confidence            777766655443         2899999999999999763222333322  2334444  35567889999999999999


Q ss_pred             HHHhhC----C-CCCceEEecCC--CccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-C
Q 020254          239 YEALSN----P-SYRGVINGTAP--NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-L  310 (328)
Q Consensus       239 ~~~~~~----~-~~~g~~~i~~~--~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l  310 (328)
                      +.++..    + ..+++||++++  +++|+.|+++.+.+.+|.+..+..+... .       ........++++|+++ |
T Consensus       243 ~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~-------~~~~~~~~~d~~k~~~~l  314 (357)
T 1rkx_A          243 LLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA-H-------PHEAHYLKLDCSKAKMQL  314 (357)
T ss_dssp             HHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------CCCCCCBCCHHHHHHH
T ss_pred             HHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC-C-------CcCcccccCCHHHHHHHh
Confidence            998874    2 34679999984  6899999999999999987444333211 1       1112456778888865 9


Q ss_pred             CCCcccccHHHHHHHhh
Q 020254          311 GFPFKYRYVKDALKAIM  327 (328)
Q Consensus       311 G~~p~~~~~~~~l~~~l  327 (328)
                      ||+|+++ ++++|++++
T Consensus       315 G~~p~~~-l~e~l~~~~  330 (357)
T 1rkx_A          315 GWHPRWN-LNTTLEYIV  330 (357)
T ss_dssp             CCCCCCC-HHHHHHHHH
T ss_pred             CCCcCCc-HHHHHHHHH
Confidence            9999995 999999876

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.1e-38  Score=276.23  Aligned_cols=282  Identities=16%  Similarity=0.137  Sum_probs=207.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~   98 (328)
                      ..||+|||||||||||++|+++|+++|++|++++|+...............+..+|+.|++.+.+++++  +|+|||+|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   98 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA   98 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence            456899999999999999999999999999999998654322221111112445799999999999987  999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeec----CCCcccccCCCCCC-Cch-HHHHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG----TSETEVFDESSPSG-NDY-LAEVC  172 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg----~~~~~~~~e~~~~~-~~y-~~k~~  172 (328)
                      .....  ...++.  +++|+.++.++++++.+  .+++++|++||.++  ||    .... +++|+..+. ..| .+|..
T Consensus        99 ~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~--~g~~~~~~~~-~~~E~~~p~~~~Y~~sK~~  169 (333)
T 2q1w_A           99 SYKDP--DDWYND--TLTNCVGGSNVVQAAKK--NNVGRFVYFQTALC--YGVKPIQQPV-RLDHPRNPANSSYAISKSA  169 (333)
T ss_dssp             CCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GCSCCCSSSB-CTTSCCCCTTCHHHHHHHH
T ss_pred             ecCCC--ccCChH--HHHHHHHHHHHHHHHHH--hCCCEEEEECcHHH--hCCCcccCCC-CcCCCCCCCCCchHHHHHH
Confidence            75322  233333  89999999999999999  67889999999988  88    5444 777776444 566 66766


Q ss_pred             HHHHHHH-hcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCC
Q 020254          173 REWEGTA-LKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYR  248 (328)
Q Consensus       173 ~~~~~~~-~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  248 (328)
                      .|..... +.     +++++||+++|||+..  ..+++.+  ....+.++ + +...+++++++|+|++++.++..+. +
T Consensus       170 ~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-g  240 (333)
T 2q1w_A          170 NEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDGVG-H  240 (333)
T ss_dssp             HHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC-C
T ss_pred             HHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            6655544 32     8999999999999831  1222222  22233332 3 5677899999999999999998876 6


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          249 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       249 g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      ++||+++++++++.|+++.+.+.+|.+.....|...      +..........++++|++++||+|+++ ++++|++++
T Consensus       241 ~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~d~~k~~~~G~~p~~~-~~~~l~~~~  312 (333)
T 2q1w_A          241 GAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRE------LGPDDAPSILLDPSRTIQDFGKIEFTP-LKETVAAAV  312 (333)
T ss_dssp             EEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEE------CCTTSCCCCCBCCHHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             CEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCC------cccccccccccCCHHHHHhcCCCcCCC-HHHHHHHHH
Confidence            799999999999999999999999976212222210      111112345778888997669999985 999999876

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=5.4e-39  Score=274.12  Aligned_cols=272  Identities=23%  Similarity=0.235  Sum_probs=199.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      |||+|||||| ||||++|+++|+++||+|++++|++.+...+....  ..+..+|+.|.+     +.++|+|||+|+...
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~-----~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASG--AEPLLWPGEEPS-----LDGVTHLLISTAPDS   75 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTT--EEEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCC--CeEEEecccccc-----cCCCCEEEECCCccc
Confidence            4689999998 99999999999999999999999886644332111  013345666633     789999999998642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC--ch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~  178 (328)
                      ..              ...+.++++++++...+++++||+||.++  ||.....+++|+++..+  .| .+|...|....
T Consensus        76 ~~--------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  139 (286)
T 3ius_A           76 GG--------------DPVLAALGDQIAARAAQFRWVGYLSTTAV--YGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQ  139 (286)
T ss_dssp             TB--------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGG--GCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cc--------------cHHHHHHHHHHHhhcCCceEEEEeeccee--cCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            21              11246888888874346789999999999  99888778899888654  35 55555555544


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC--CCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP  256 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~  256 (328)
                      .+   .+++++++||+++||++......+      ..+.+  +..+.+.++++|++|+|++++.+++++..+++||++++
T Consensus       140 ~~---~~~~~~ilRp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~  210 (286)
T 3ius_A          140 AV---PNLPLHVFRLAGIYGPGRGPFSKL------GKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDD  210 (286)
T ss_dssp             HS---TTCCEEEEEECEEEBTTBSSSTTS------SSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCS
T ss_pred             hh---cCCCEEEEeccceECCCchHHHHH------hcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCC
Confidence            43   589999999999999986543222      23333  23446789999999999999999999876669999999


Q ss_pred             CccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCc-ceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          257 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       257 ~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      +++++.|+++.+.+.+|.+....+|.....  .++. .........++++|+++ |||+|++++++++|+++++
T Consensus       211 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~  282 (286)
T 3ius_A          211 EPVPPQDVIAYAAELQGLPLPPAVDFDKAD--LTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQA  282 (286)
T ss_dssp             CCBCHHHHHHHHHHHHTCCCCCEEEGGGSC--CCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCCCcccchhhhc--cChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence            999999999999999998744333322100  0000 01122566788899976 8999999559999999873

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=6.6e-39  Score=278.02  Aligned_cols=283  Identities=18%  Similarity=0.203  Sum_probs=206.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      .++|+|||||||||||++|+++|+++|++|++++|++............  .  .+-...+.+..-+.++|+|||+|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~--~~~~~~~~~~~Dl~~~d~vi~~a~~~   80 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK--F--LEKPVLELEERDLSDVRLVYHLASHK   80 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE--E--ECSCGGGCCHHHHTTEEEEEECCCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh--h--ccCCCeeEEeCccccCCEEEECCccC
Confidence            4578999999999999999999999999999999987631111111000  0  00001111222233899999999975


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG  177 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~  177 (328)
                      .. ......+...++ |+.++.++++++++  .+++++||+||.++  ||.....+++|+.+..  +.| .+|...|...
T Consensus        81 ~~-~~~~~~~~~~~~-n~~~~~~ll~a~~~--~~v~~~v~~SS~~v--~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           81 SV-PRSFKQPLDYLD-NVDSGRHLLALCTS--VGVPKVVVGSTCEV--YGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CH-HHHTTSTTTTHH-HHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             Ch-HHHHhCHHHHHH-HHHHHHHHHHHHHH--cCCCeEEEecCHHH--hCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            32 111122334556 99999999999999  67899999999999  9988777888888753  456 7787788777


Q ss_pred             HHhcccCCC-eEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCCCceE
Q 020254          178 TALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI  251 (328)
Q Consensus       178 ~~~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~  251 (328)
                      ..+...+++ +++++||+.+||++.... .++..+  ....+.++   ++++..++++|++|+|++++.++..+.. |+|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-SVV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-SEE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-CeE
Confidence            777777799 999999999999986431 222222  22334432   6778899999999999999999998776 499


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCc-ccccHHHHHHHhh
Q 020254          252 NGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDALKAIM  327 (328)
Q Consensus       252 ~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p-~~~~~~~~l~~~l  327 (328)
                      |+++++++++.|+++.+. .+|.+..+ ..|..          ........++++|+++ |||+| ++ +++++|++++
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~~l~~~~  299 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR----------PNEITEFRADTALQTRQIGERSGGI-GIEEGIRLTL  299 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC----------TTCCSBCCBCCHHHHHHHCCCSCCC-CHHHHHHHHH
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCCccccCCCC----------CCCcceeeccHHHHHHHhCCCCCcC-CHHHHHHHHH
Confidence            999999999999999999 99976322 12211          1122456778888876 99999 77 5999999886

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-39  Score=281.57  Aligned_cols=295  Identities=15%  Similarity=0.119  Sum_probs=216.1

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc--c--CCCCCccccCceeecCChhhHhhcCC--CcE
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQG--STA   92 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~   92 (328)
                      ...++|+|||||||||||++|++.|+++|++|++++|++.....  .  ........+..+|+.|.+.+.+++++  +|+
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            44567899999999999999999999999999999998764210  0  00000111345788899999988874  799


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcccccCCCCCC--Cch-H
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L  168 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~  168 (328)
                      |||+|+.... .....++...+++|+.++.++++++.+  .++ +++||+||.++  ||.....+++|+.+..  +.| .
T Consensus        90 Vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~  164 (335)
T 1rpn_A           90 VYNLAAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEM--FGLIQAERQDENTPFYPRSPYGV  164 (335)
T ss_dssp             EEECCSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             EEECccccch-hhhhhChHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEeCHHH--hCCCCCCCCCcccCCCCCChhHH
Confidence            9999996421 111235678899999999999999998  565 89999999998  9987767788887754  356 7


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHH-HH-HHHcCCC----CCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...|.....+....+++++++||+++|||+...  ....+. .+ ....+.+    ++++++.++++|++|+|++++.
T Consensus       165 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~  244 (335)
T 1rpn_A          165 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL  244 (335)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHH
Confidence            77777777766665568999999999999997532  112222 22 2334442    2677889999999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccc
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYR  317 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~  317 (328)
                      +++.+. .++||+++++++|+.|+++.+.+.+|.+..  ++.+...       ..........++++|++ .|||+|+++
T Consensus       245 ~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG~~p~~~  316 (335)
T 1rpn_A          245 MLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF-------FRPAEVDVLLGNPAKAQRVLGWKPRTS  316 (335)
T ss_dssp             HHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG-------CCSSCCCBCCBCTHHHHHHHCCCCCSC
T ss_pred             HHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc-------cCCCcchhhcCCHHHHHHhcCCCcCCC
Confidence            998865 589999999999999999999999997621  1111100       00111233456788886 499999995


Q ss_pred             cHHHHHHHhh
Q 020254          318 YVKDALKAIM  327 (328)
Q Consensus       318 ~~~~~l~~~l  327 (328)
                       ++++|++++
T Consensus       317 -l~e~l~~~~  325 (335)
T 1rpn_A          317 -LDELIRMMV  325 (335)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             999999876

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=7e-39  Score=276.82  Aligned_cols=287  Identities=14%  Similarity=0.143  Sum_probs=212.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   98 (328)
                      +|+|||||||||||++|+++|+++  |++|++++|++.... .....   .+..+|+.|.+++.++++  ++|+|||+|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   77 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVNSG---PFEVVNALDFNQIEHLVEVHKITDIYLMAA   77 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHHSS---CEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccCCC---ceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence            478999999999999999999998  899999999876532 11111   145679999999999997  8999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc-ccccCCCCC--CCch-HHHHHHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-EVFDESSPS--GNDY-LAEVCRE  174 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~-~~~~e~~~~--~~~y-~~k~~~~  174 (328)
                      ....  ....++...+++|+.++.++++++.+  .+++++||+||.++  |+.... .+.+|+.+.  .+.| .+|...|
T Consensus        78 ~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  151 (312)
T 2yy7_A           78 LLSA--TAEKNPAFAWDLNMNSLFHVLNLAKA--KKIKKIFWPSSIAV--FGPTTPKENTPQYTIMEPSTVYGISKQAGE  151 (312)
T ss_dssp             CCHH--HHHHCHHHHHHHHHHHHHHHHHHHHT--TSCSEEECCEEGGG--CCTTSCSSSBCSSCBCCCCSHHHHHHHHHH
T ss_pred             cCCC--chhhChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHH--hCCCCCCCCccccCcCCCCchhHHHHHHHH
Confidence            6321  12345678899999999999999999  68889999999998  986543 456676653  4456 7777777


Q ss_pred             HHHHHhcccCCCeEEEEEeceEEcCCCcc----hhhhHHHH-HHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          175 WEGTALKVNKDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       175 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~-~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .....+....+++++++||+.+||+....    ...+...+ ....+.+   ++++++.++++|++|+|++++.+++.+.
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  231 (312)
T 2yy7_A          152 RWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV  231 (312)
T ss_dssp             HHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence            77766655568999999999999975321    11233322 2233333   3667788999999999999999998765


Q ss_pred             C----CceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHH
Q 020254          247 Y----RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  321 (328)
Q Consensus       247 ~----~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~  321 (328)
                      .    +++||+++ +.+|+.|+++.+.+.+|.......|... .....      .....++++|+++ |||+|+++ +++
T Consensus       232 ~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~~~~~~-~~~~~------~~~~~~d~~k~~~~lG~~p~~~-l~~  302 (312)
T 2yy7_A          232 EKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITYEPDFR-QKIAD------SWPASIDDSQAREDWDWKHTFD-LES  302 (312)
T ss_dssp             GGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEECCCTH-HHHHT------TSCSSBCCHHHHHHHCCCCCCC-HHH
T ss_pred             cccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEeccCcc-ccccc------cccccCCHHHHHHHcCCCCCCC-HHH
Confidence            3    36999986 7899999999999999842111112100 00000      1234678888865 89999995 999


Q ss_pred             HHHHhhC
Q 020254          322 ALKAIMS  328 (328)
Q Consensus       322 ~l~~~l~  328 (328)
                      +|+++++
T Consensus       303 ~l~~~~~  309 (312)
T 2yy7_A          303 MTKDMIE  309 (312)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3.3e-38  Score=276.73  Aligned_cols=290  Identities=19%  Similarity=0.213  Sum_probs=213.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc------ccccC----C-CCCccccCceeecCChhhHhhcC--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------AELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ--   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~--   88 (328)
                      |+|+|||||||||||++|+++|+++|++|++++|+...      .....    . ......+..+|+.|.+++.++++  
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            35799999999999999999999999999999986543      11100    0 00001144579999999999887  


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---CC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GN  165 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---~~  165 (328)
                      ++|+|||+|+.... ......+...+++|+.++.++++++++  .+++++||+||.++  ||.....+++|+.+.   ..
T Consensus        81 ~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~E~~~~~p~~~  155 (348)
T 1ek6_A           81 SFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATV--YGNPQYLPLDEAHPTGGCTN  155 (348)
T ss_dssp             CEEEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSS
T ss_pred             CCCEEEECCCCcCc-cchhhchHHHHHHHHHHHHHHHHHHHH--hCCCEEEEECcHHH--hCCCCCCCcCCCCCCCCCCC
Confidence            89999999996421 112345678899999999999999998  67889999999998  997777788888774   34


Q ss_pred             ch-HHHHHHHHHHHHhccc-CCCeEEEEEeceEEcCCCc------c---hhhhHHHH-HHH--cCCCC---C------CC
Q 020254          166 DY-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDGG------A---LAKMIPLF-MMF--AGGPL---G------SG  222 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~------~---~~~~~~~~-~~~--~~~~~---~------~~  222 (328)
                      .| .+|...|.....+... .+++++++||+++||++..      .   ...+++.+ ...  .+.++   +      ++
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  235 (348)
T 1ek6_A          156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG  235 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred             chHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCC
Confidence            56 7777777776665544 2499999999999999521      0   12344433 222  23322   2      56


Q ss_pred             CcccccccHHHHHHHHHHHhhCC--CCC-ceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeec
Q 020254          223 QQWFSWIHLDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLE  298 (328)
Q Consensus       223 ~~~~~~i~v~D~a~~~~~~~~~~--~~~-g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~  298 (328)
                      ++.++++|++|+|++++.+++.+  ..+ ++||+++++++|+.|+++.+.+.+|.+..+ ..|..     .++     ..
T Consensus       236 ~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~  305 (348)
T 1ek6_A          236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR-----EGD-----VA  305 (348)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-----TTC-----CS
T ss_pred             ceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----Ccc-----ch
Confidence            78899999999999999999764  233 599999999999999999999999976322 11210     111     12


Q ss_pred             CcccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          299 GQRVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       299 ~~~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ...++++|++ .|||+|+++ ++++|++++
T Consensus       306 ~~~~d~~k~~~~lG~~p~~~-l~~~l~~~~  334 (348)
T 1ek6_A          306 ACYANPSLAQEELGWTAALG-LDRMCEDLW  334 (348)
T ss_dssp             EECBCCHHHHHTTCCCCCCC-HHHHHHHHH
T ss_pred             hhccCHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence            3456778885 589999996 999999876

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.2e-38  Score=277.50  Aligned_cols=295  Identities=17%  Similarity=0.225  Sum_probs=213.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhcCCCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      |+|||||||||||++++++|+++ |++|++++|++.+......... ..+..+|+.|. +.+.++++++|+|||+|+...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~   79 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCC-eEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence            68999999999999999999998 8999999998766543322111 11345688874 568888889999999998642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---------CCch-HHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-LAEV  171 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---------~~~y-~~k~  171 (328)
                      . .....++...+++|+.++.++++++.+  .+ +++||+||.++  ||.....+++|+.+.         ...| .+|.
T Consensus        80 ~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~v~~SS~~v--~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~  153 (345)
T 2bll_A           80 P-IEYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (345)
T ss_dssp             H-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             c-cchhcCHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecHHH--cCCCCCCCcCCcccccccCcccCcccccHHHHH
Confidence            1 111245677889999999999999998  56 89999999998  997766677777642         1256 6777


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcch-------hhhHHH-H-HHHcCCCC---CCCCcccccccHHHHHHHHH
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPL-F-MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~-~-~~~~~~~~---~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..|.....+....+++++++||+.+||++....       ..++.. + ....+.++   +++++.++++|++|+|++++
T Consensus       154 ~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  233 (345)
T 2bll_A          154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHH
Confidence            777777666555689999999999999975321       122222 2 33455553   56678899999999999999


Q ss_pred             HHhhCCC---CCceEEecCCC-ccCHHHHHHHHHHHhCCCC-CCCCcHHH------HHHHhcCcceeeecCcccCchHHH
Q 020254          240 EALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA------LKAVLGEGAFVVLEGQRVVPARAK  308 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~-~~~~~e~~~~i~~~~g~~~-~~~~p~~~------~~~~~~~~~~~~~~~~~~~~~~~~  308 (328)
                      .+++.+.   .+++||+++++ ++|+.|+++.+.+.+|.+. .+..|.+.      .....+. .........++++|++
T Consensus       234 ~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~  312 (345)
T 2bll_A          234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK-GYQDVEHRKPSIRNAH  312 (345)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHHH
T ss_pred             HHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccc-cccchhhhcccHHHHH
Confidence            9998753   34599999986 8999999999999998763 22222210      0000000 0001234567788886


Q ss_pred             -HCCCCcccccHHHHHHHhh
Q 020254          309 -ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       309 -~lG~~p~~~~~~~~l~~~l  327 (328)
                       .|||+|+++ ++++|++++
T Consensus       313 ~~lG~~p~~~-l~~~l~~~~  331 (345)
T 2bll_A          313 RCLDWEPKID-MQETIDETL  331 (345)
T ss_dssp             HHHCCCCCCC-HHHHHHHHH
T ss_pred             HhcCCCcccc-HHHHHHHHH
Confidence             589999995 999999986

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-38  Score=279.25  Aligned_cols=299  Identities=16%  Similarity=0.126  Sum_probs=217.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cccCC-----CCCccccCceeecCChhhHhhcCC--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP-----GKKTRFFPGVMIAEEPQWRDCIQG--   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~--   89 (328)
                      |||+|||||||||||++|++.|+++|++|++++|++...     ..+..     ......+..+|+.|.+++.+++++  
T Consensus        23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            447999999999999999999999999999999986541     11100     000111345788899999888874  


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC---CcEEEEecccceeecCCCcccccCCCCC--C
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPS--G  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~  164 (328)
                      +|+|||+|+.... .....++...+++|+.++.++++++.+  .++   ++|||+||.++  |+.....+++|+++.  .
T Consensus       103 ~d~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~~~~iv~~SS~~~--~~~~~~~~~~E~~~~~~~  177 (375)
T 1t2a_A          103 PTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKT--CGLINSVKFYQASTSEL--YGKVQEIPQKETTPFYPR  177 (375)
T ss_dssp             CSEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEGGG--TCSCSSSSBCTTSCCCCC
T ss_pred             CCEEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCccceEEEecchhh--hCCCCCCCCCccCCCCCC
Confidence            7999999996421 112345678889999999999999998  565   79999999998  987766678888764  3


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHH-HH-HHHcCC-C---CCCCCcccccccHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGG-P---LGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~-~---~~~~~~~~~~i~v~D~a  235 (328)
                      ..| .+|...|.....+....+++++++||+.+|||+...  ....+. .+ ....+. +   ++++++.++++|++|+|
T Consensus       178 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva  257 (375)
T 1t2a_A          178 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV  257 (375)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHH
Confidence            457 778777777766666568999999999999996432  112222 22 223343 2   26778899999999999


Q ss_pred             HHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhc-------C--cceeeecCcccC
Q 020254          236 NLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLG-------E--GAFVVLEGQRVV  303 (328)
Q Consensus       236 ~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~---~p~~~~~~~~~-------~--~~~~~~~~~~~~  303 (328)
                      ++++.+++.+. .++||+++++++|+.|+++.+.+.+|.+..+.   +|.+.+....+       .  ..........++
T Consensus       258 ~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  336 (375)
T 1t2a_A          258 EAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGD  336 (375)
T ss_dssp             HHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred             HHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCC
Confidence            99999998765 58999999999999999999999999763221   22221110000       0  001112334567


Q ss_pred             chHHH-HCCCCcccccHHHHHHHhh
Q 020254          304 PARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       304 ~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ++|++ .|||+|+++ ++++|++++
T Consensus       337 ~~k~~~~lG~~p~~~-l~e~l~~~~  360 (375)
T 1t2a_A          337 CTKAKQKLNWKPRVA-FDELVREMV  360 (375)
T ss_dssp             CHHHHHHHCCCCCSC-HHHHHHHHH
T ss_pred             HHHHHHhcCCCccCC-HHHHHHHHH
Confidence            88886 589999995 999999876

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=7.4e-38  Score=273.93  Aligned_cols=288  Identities=18%  Similarity=0.206  Sum_probs=206.4

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +.++|+|||||||||||++|+++|+++|++|++++|+............  ...++++...|..+..+.++|+|||+|+.
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~d~vih~A~~  101 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPLYIEVDQIYHLASP  101 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCCCCCCSEEEECCSC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChhhcCCCEEEECccc
Confidence            3456899999999999999999999999999999997543221111000  01234444444444556789999999996


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC-----CC--CCch-HHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEV  171 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~-----~~--~~~y-~~k~  171 (328)
                      ..... ...++...+++|+.++.+++++|.+  .++ ++||+||.++  ||.....+++|+.     +.  ...| .+|.
T Consensus       102 ~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  175 (343)
T 2b69_A          102 ASPPN-YMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  175 (343)
T ss_dssp             CSHHH-HTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEGGG--GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             cCchh-hhhCHHHHHHHHHHHHHHHHHHHHH--hCC-cEEEECcHHH--hCCCCCCCCcccccccCCCCCCCCchHHHHH
Confidence            42111 1234567889999999999999998  555 8999999988  9877666777763     32  2346 6777


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcch-hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCC
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ..|.....+....+++++++||+.+||++.... ..++..+  ....+.++   ++++..++++|++|+|++++.++..+
T Consensus       176 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence            777766655555689999999999999974321 1222222  33345543   66778899999999999999999875


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL  323 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l  323 (328)
                      . +++||+++++++|+.|+++.+.+.+|.+..+ ..|...     .     ......++++|++ .|||+|+++ ++++|
T Consensus       256 ~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----~-----~~~~~~~d~~k~~~~lG~~p~~~-l~e~l  323 (343)
T 2b69_A          256 V-SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ-----D-----DPQKRKPDIKKAKLMLGWEPVVP-LEEGL  323 (343)
T ss_dssp             C-CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT-----T-----CCCCCCBCCHHHHHHHCCCCCSC-HHHHH
T ss_pred             C-CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCC-----C-----CCceecCCHHHHHHHcCCCCCCC-HHHHH
Confidence            4 6799999999999999999999999976322 222110     0     1123556778886 589999985 99999


Q ss_pred             HHhh
Q 020254          324 KAIM  327 (328)
Q Consensus       324 ~~~l  327 (328)
                      ++++
T Consensus       324 ~~~~  327 (343)
T 2b69_A          324 NKAI  327 (343)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=6.1e-38  Score=276.42  Aligned_cols=296  Identities=16%  Similarity=0.179  Sum_probs=213.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCC--cccccCCC--CCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      |+||||||+||||++|++.|++. |++|++++|+..  ....+...  .....+..+|+.|.+.+.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            58999999999999999999998 799999999752  11221110  0111234579999999999997  89999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCC--CCC-------cEEEEecccceeecCCCc--c--------cc
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE--GVR-------PSVLVSATALGYYGTSET--E--------VF  157 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~-------~~v~~Ss~~v~~yg~~~~--~--------~~  157 (328)
                      |+... .......+...+++|+.++.++++++.+  .  +++       +|||+||.++  ||....  .        ++
T Consensus        81 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~v~~~~~~~~~iv~~SS~~v--~g~~~~~~~~~~~~~~~~~  155 (361)
T 1kew_A           81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARK--YWSALGEDKKNNFRFHHISTDEV--YGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHH--HHHTSCHHHHHHCEEEEEEEGGG--GCCCCCGGGSCTTSCCCCB
T ss_pred             CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hccCcccccccCceEEEeCCHHH--hCCCcccccccccccCCCC
Confidence            99642 1122345678899999999999999998  5  666       9999999998  886532  1        67


Q ss_pred             cCCCCC--CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCC---CCCCcccccc
Q 020254          158 DESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL---GSGQQWFSWI  229 (328)
Q Consensus       158 ~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~i  229 (328)
                      +|+.+.  ...| .+|...|.....+..+.+++++++||+.|||+..... .++.. + ....+.++   +++...++++
T Consensus       156 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  234 (361)
T 1kew_A          156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWL  234 (361)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEeeE
Confidence            777664  3457 7787777777666655689999999999999975321 22222 2 23344442   6677889999


Q ss_pred             cHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH
Q 020254          230 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE  309 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (328)
                      |++|+|++++.++..+..+++||++++.++++.|+++.+.+.+|.+.+...|.......... .........++++|+++
T Consensus       235 ~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~-~~~~~~~~~~d~~k~~~  313 (361)
T 1kew_A          235 YVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVAD-RPGHDRRYAIDAGKISR  313 (361)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECC-CTTCCCBCCBCCHHHHH
T ss_pred             EHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCC-CCcccceeecCHHHHHH
Confidence            99999999999998765556999999999999999999999998653222221100000000 00011234577888865


Q ss_pred             -CCCCcccccHHHHHHHhh
Q 020254          310 -LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       310 -lG~~p~~~~~~~~l~~~l  327 (328)
                       |||+|+++ ++++|++++
T Consensus       314 ~lG~~p~~~-~~e~l~~~~  331 (361)
T 1kew_A          314 ELGWKPLET-FESGIRKTV  331 (361)
T ss_dssp             HHCCCCSCC-HHHHHHHHH
T ss_pred             HhCCCCccC-HHHHHHHHH
Confidence             99999995 999999876

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.5e-37  Score=277.27  Aligned_cols=290  Identities=16%  Similarity=0.174  Sum_probs=213.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH-hCCCeEEEEecCCCcc---------cccC-------CC--CCc---cccCceeecCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKA---------ELIF-------PG--KKT---RFFPGVMIAEE   80 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~~-------~~--~~~---~~~~~~d~~~~   80 (328)
                      .|+|||||||||||++|+++|+ ++|++|++++|+....         ..+.       ..  ...   ..+..+|+.|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3699999999999999999999 9999999999976542         1110       00  000   12445799999


Q ss_pred             hhhHhhcC--C-CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC----
Q 020254           81 PQWRDCIQ--G-STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----  153 (328)
Q Consensus        81 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~----  153 (328)
                      +.+.++++  + +|+|||+|+.... ......+...+++|+.++.++++++.+  .++++|||+||.++  ||...    
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~iv~~SS~~v--~g~~~~~~~  156 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAI--FGNPTMGSV  156 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--TBSCCC---
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCc-CcchhhHHHHHHHHhHHHHHHHHHHHH--hCCCEEEEECCHHH--hCCCCcccc
Confidence            99988887  6 9999999996421 112345678899999999999999998  68889999999988  88665    


Q ss_pred             ---cccccCCCCC--CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc--------chhhhHHHH------HH
Q 020254          154 ---TEVFDESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF------MM  213 (328)
Q Consensus       154 ---~~~~~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--------~~~~~~~~~------~~  213 (328)
                         ..+++|+++.  ...| .+|...|.....+..+.+++++++||++|||++..        ....+++.+      ..
T Consensus       157 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  236 (397)
T 1gy8_A          157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (397)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence               4678888775  3457 77877777776666556899999999999999631        112333322      22


Q ss_pred             HcCC------------CC---C------CCCcccccccHHHHHHHHHHHhhCCC-C-----C---ceEEecCCCccCHHH
Q 020254          214 FAGG------------PL---G------SGQQWFSWIHLDDIVNLIYEALSNPS-Y-----R---GVINGTAPNPVRLAE  263 (328)
Q Consensus       214 ~~~~------------~~---~------~~~~~~~~i~v~D~a~~~~~~~~~~~-~-----~---g~~~i~~~~~~~~~e  263 (328)
                      ..+.            ++   +      ++++.+++||++|+|++++.+++.+. .     .   ++||+++++++++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  316 (397)
T 1gy8_A          237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (397)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             HhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHH
Confidence            2222            22   2      56788999999999999999987532 2     3   799999999999999


Q ss_pred             HHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          264 MCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       264 ~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      +++.+.+.+|.+..+ ..|..     .++     .....++++|++ .|||+|++++++++|++++
T Consensus       317 ~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~  372 (397)
T 1gy8_A          317 VIEVARKTTGHPIPVRECGRR-----EGD-----PAYLVAASDKAREVLGWKPKYDTLEAIMETSW  372 (397)
T ss_dssp             HHHHHHHHHCCCCCEEEECCC-----TTC-----CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCeeeCCCC-----CCc-----ccccccCHHHHHHHhCCCCCcCCHHHHHHHHH
Confidence            999999999976322 11110     111     123556778885 5999999944999999876

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=2.3e-37  Score=276.82  Aligned_cols=291  Identities=19%  Similarity=0.186  Sum_probs=207.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-----------------ccC----CCCCccccCceeecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----------------LIF----PGKKTRFFPGVMIAEE   80 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~~~----~~~~~~~~~~~d~~~~   80 (328)
                      .+|+|||||||||||++|+++|+++|++|++++|......                 ...    .......+..+|+.|.
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            4689999999999999999999999999999998643210                 000    0000011445789999


Q ss_pred             hhhHhhcCC--CcEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcc
Q 020254           81 PQWRDCIQG--STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE  155 (328)
Q Consensus        81 ~~~~~~~~~--~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~  155 (328)
                      +.+.+++++  +|+|||+||.....  ..........+++|+.++.++++++.+  .+. +++|++||.++  ||... .
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~~~V~~SS~~v--yg~~~-~  164 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGE--YGTPN-I  164 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--GCCCS-S
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHH--hCCCcEEEEeCcHHH--hCCCC-C
Confidence            999998886  99999999964221  112222345789999999999999998  565 59999999988  98654 3


Q ss_pred             cccCC--------------CC--CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch--------------
Q 020254          156 VFDES--------------SP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------------  204 (328)
Q Consensus       156 ~~~e~--------------~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--------------  204 (328)
                      +++|+              .+  +.+.| .+|...|.....+....+++++++||++||||+....              
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~  244 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  244 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence            45553              12  34567 7787777766655555589999999999999975310              


Q ss_pred             --hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCC-C--ceEEecCCCccCHHHHHHHHHHH---
Q 020254          205 --AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGNV---  271 (328)
Q Consensus       205 --~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~--g~~~i~~~~~~~~~e~~~~i~~~---  271 (328)
                        ...+..+  ....+.++   +++.+.++++|++|+|++++.+++.+.. +  ++||+++ +++|+.|+++.+.+.   
T Consensus       245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~  323 (404)
T 1i24_A          245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSK  323 (404)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHT
T ss_pred             chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHh
Confidence              1222222  33445553   6778899999999999999999987653 3  4999998 889999999999998   


Q ss_pred             hCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          272 LGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       272 ~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      +|.+.. ...|.+.     .   ........++++|+++|||+|+++ +++++++++
T Consensus       324 ~g~~~~~~~~p~~~-----~---~~~~~~~~~d~~k~~~LG~~p~~~-~~~~l~~~~  371 (404)
T 1i24_A          324 LGLDVKKMTVPNPR-----V---EAEEHYYNAKHTKLMELGLEPHYL-SDSLLDSLL  371 (404)
T ss_dssp             TTCCCCEEEECCSS-----C---SCSSCCCCBCCCHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             hCCCccccccCccc-----C---ccccceEecCHHHHHHcCCCcCcC-HHHHHHHHH
Confidence            676522 1222210     0   011123456778888899999984 999998875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.9e-37  Score=268.13  Aligned_cols=278  Identities=15%  Similarity=0.168  Sum_probs=183.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  100 (328)
                      +|+|||||||||||++|+++|+++|++|++++|+....       .   +..+|+.|++.+.++++  ++|+|||+|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~---~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   71 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-------K---FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER   71 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHHCCSEEEECC---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-------C---eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence            57999999999999999999999999999999876441       1   34579999999998887  499999999964


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG  177 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~  177 (328)
                      .. ..+..++...+++|+.++.++++++.+  .++ ++||+||.++  |+. ...+++|+.+..  +.| .+|...|...
T Consensus        72 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  144 (315)
T 2ydy_A           72 RP-DVVENQPDAASQLNVDASGNLAKEAAA--VGA-FLIYISSDYV--FDG-TNPPYREEDIPAPLNLYGKTKLDGEKAV  144 (315)
T ss_dssp             -----------------CHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             Ch-hhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchHHH--cCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            22 223456778899999999999999998  565 9999999998  887 556788877643  345 5566555555


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcchhhhHH-HH-HHH-cCCCC-CCCCcccccccHHHHHHHHHHHhhCC----CCCc
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMF-AGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP----SYRG  249 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~-~~-~~~-~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~----~~~g  249 (328)
                      ..+    +++++++||+.|||+.......++. .+ ... .+.++ ..++..++++|++|+|++++.++..+    ..++
T Consensus       145 ~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  220 (315)
T 2ydy_A          145 LEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKG  220 (315)
T ss_dssp             HHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCE
T ss_pred             HHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCC
Confidence            443    4678999999999997642112221 11 222 34443 23467789999999999999998753    3567


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          250 VINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       250 ~~~i~~~~~~~~~e~~~~i~~~~g~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      +||+++++++++.|+++.+.+.+|.+..  .+.|.     ... ..........++++|++++||+|.++ ++++|++++
T Consensus       221 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-~~~~~~~~~~~d~~k~~~~G~~p~~~-~~~~l~~~~  293 (315)
T 2ydy_A          221 TFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITD-----SPV-LGAQRPRNAQLDCSKLETLGIGQRTP-FRIGIKESL  293 (315)
T ss_dssp             EEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECS-----CCC-SSSCCCSBCCBCCHHHHHTTCCCCCC-HHHHHHHHH
T ss_pred             eEEEcCCCcccHHHHHHHHHHHhCCChhheecccc-----ccc-cccCCCcccccchHHHHhcCCCCCCC-HHHHHHHHH
Confidence            9999999999999999999999998742  12222     000 00111235677888998779999996 999999986


Q ss_pred             C
Q 020254          328 S  328 (328)
Q Consensus       328 ~  328 (328)
                      +
T Consensus       294 ~  294 (315)
T 2ydy_A          294 W  294 (315)
T ss_dssp             G
T ss_pred             H
Confidence            3

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-37  Score=271.84  Aligned_cols=288  Identities=16%  Similarity=0.139  Sum_probs=207.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-c----ccCCCCCccccCceeecCChhhHhhcCC--CcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-E----LIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~   95 (328)
                      ||+|||||||||||++|++.|+++|++|++++|+.... .    .+.... ...+..+|+.|++++++++++  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG-NFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCC-ceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            57999999999999999999999999999999854211 1    111111 011445799999999999987  999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-cEEEEecccceeecCCCccc----------------cc
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEV----------------FD  158 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~Ss~~v~~yg~~~~~~----------------~~  158 (328)
                      +|+... .......+...+++|+.++.++++++.+  .+++ ++||+||.++  ||.....+                .+
T Consensus        80 ~A~~~~-~~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~iv~~SS~~v--~g~~~~~~~~e~~~~~~~~~~~~~~~  154 (347)
T 1orr_A           80 LAGQVA-MTTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV--YGDLEQYKYNETETRYTCVDKPNGYD  154 (347)
T ss_dssp             CCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG--GTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred             CCcccC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEeccHHH--hCCCCcCCcccccccccccccccCcc
Confidence            999642 1112345678899999999999999998  5664 8999999998  98654332                44


Q ss_pred             CCCCC--CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch--hhhHHHH--HHHcCC-----C---CCCCC
Q 020254          159 ESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGG-----P---LGSGQ  223 (328)
Q Consensus       159 e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~--~~~~~~-----~---~~~~~  223 (328)
                      |+.+.  ...| .+|...|.....+..+.+++++++||+.|||+.....  ..++..+  ....+.     +   .++++
T Consensus       155 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  234 (347)
T 1orr_A          155 ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK  234 (347)
T ss_dssp             TTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSC
T ss_pred             ccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCc
Confidence            55543  3356 6777777777666555689999999999999975321  1122211  112222     3   26778


Q ss_pred             cccccccHHHHHHHHHHHhhCC-C-CCceEEecCCC--ccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeec
Q 020254          224 QWFSWIHLDDIVNLIYEALSNP-S-YRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLE  298 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~-~-~~g~~~i~~~~--~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~  298 (328)
                      +.++++|++|+|++++.++..+ . .+++||++++.  ++|+.|+++.+.+.+|.+..+ ..|..     .+     ...
T Consensus       235 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~-----~~~  304 (347)
T 1orr_A          235 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR-----ES-----DQR  304 (347)
T ss_dssp             CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC-----SS-----CCS
T ss_pred             ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-----CC-----Ccc
Confidence            8999999999999999999852 2 34599999986  599999999999999976322 22210     01     112


Q ss_pred             CcccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          299 GQRVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       299 ~~~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ...++++|++ .|||+|+++ ++++|++++
T Consensus       305 ~~~~d~~k~~~~lG~~p~~~-~~e~l~~~~  333 (347)
T 1orr_A          305 VFVADIKKITNAIDWSPKVS-AKDGVQKMY  333 (347)
T ss_dssp             EECBCCHHHHHHHCCCCCSC-HHHHHHHHH
T ss_pred             eeecCHHHHHHHHCCCccCC-HHHHHHHHH
Confidence            3456778885 589999985 999999876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-38  Score=268.19  Aligned_cols=272  Identities=14%  Similarity=0.104  Sum_probs=204.2

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      .....|+|||||||||||++|++.|+++|++|++++|+.                 +|+.|.+.+.++++  ++|+|||+
T Consensus         8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------~Dl~d~~~~~~~~~~~~~d~vih~   70 (292)
T 1vl0_A            8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINC   70 (292)
T ss_dssp             ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------------CCCCCHHHHHHHHHhcCCCEEEEC
Confidence            344568999999999999999999999999999999861                 68889999999888  89999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCR  173 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~  173 (328)
                      |+... ......++...+++|+.++.++++++.+  .++ ++||+||.++  |+.....+++|+.+..  +.| .+|...
T Consensus        71 A~~~~-~~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~-~iv~~SS~~v--~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  144 (292)
T 1vl0_A           71 AAHTA-VDKCEEQYDLAYKINAIGPKNLAAAAYS--VGA-EIVQISTDYV--FDGEAKEPITEFDEVNPQSAYGKTKLEG  144 (292)
T ss_dssp             CCCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCSCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             CccCC-HHHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEechHHe--ECCCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            99642 1122356788899999999999999998  566 9999999998  9877667788888753  346 666666


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCCceEE
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN  252 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~  252 (328)
                      |.....+    +.+++++||+.+||++.+....+..  ....+.++ ..++..++++|++|+|++++.++..+ .+++||
T Consensus       145 E~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~  217 (292)
T 1vl0_A          145 ENFVKAL----NPKYYIVRTAWLYGDGNNFVKTMIN--LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFH  217 (292)
T ss_dssp             HHHHHHH----CSSEEEEEECSEESSSSCHHHHHHH--HHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEE
T ss_pred             HHHHHhh----CCCeEEEeeeeeeCCCcChHHHHHH--HHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEE
Confidence            5555443    3479999999999993222222222  22234443 22357789999999999999999876 577999


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhh
Q 020254          253 GTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       253 i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l  327 (328)
                      +++++++|+.|+++.+.+.+|.+.. .++|.+....     .........++++|+++ |||+|+  +++++|++++
T Consensus       218 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l~~~~  287 (292)
T 1vl0_A          218 CTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPR-----PAKRPKYSVLRNYMLELTTGDITR--EWKESLKEYI  287 (292)
T ss_dssp             CCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCC-----SSCCCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHH
T ss_pred             ecCCCCccHHHHHHHHHHHhCCCCceeeccccccCc-----ccCCCccccccHHHHHHHcCCCCC--CHHHHHHHHH
Confidence            9999999999999999999997632 2233221100     00112346678888876 899998  5999999986

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=5.1e-37  Score=268.10  Aligned_cols=288  Identities=19%  Similarity=0.257  Sum_probs=208.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      |+|||||||||||++++++|+++|++|++++|...........     .....+..+|+.|++.+.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            5899999999999999999999999999998754321111000     0001134579999999988886  59999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---CCch-HHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC  172 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---~~~y-~~k~~  172 (328)
                      ||.... ......+...+++|+.++.++++++++  .+++++|++||.++  ||.....+++|+.+.   ...| .+|..
T Consensus        81 A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~e~~~~~~~~~~Y~~sK~~  155 (338)
T 1udb_A           81 AGLKAV-GESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATV--YGDNPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred             CccCcc-ccchhcHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEccHHH--hCCCCCCCcCcccCCCCCCChHHHHHHH
Confidence            996421 112234567889999999999999988  67889999999988  987666677887764   4467 77877


Q ss_pred             HHHHHHHhcccC-CCeEEEEEeceEEcCCCc--------c-hhhhHHHH-HHHc--CCCC---------CCCCccccccc
Q 020254          173 REWEGTALKVNK-DVRLALIRIGIVLGKDGG--------A-LAKMIPLF-MMFA--GGPL---------GSGQQWFSWIH  230 (328)
Q Consensus       173 ~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~--------~-~~~~~~~~-~~~~--~~~~---------~~~~~~~~~i~  230 (328)
                      .|.....+.... +++++++||+++||+...        . ...+.+.+ ....  +.++         .++.+.+++||
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~  235 (338)
T 1udb_A          156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEE
T ss_pred             HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEE
Confidence            777776665544 799999999999998421        0 12333333 2222  2221         24567889999


Q ss_pred             HHHHHHHHHHHhhCC--CCC-ceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchH
Q 020254          231 LDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPAR  306 (328)
Q Consensus       231 v~D~a~~~~~~~~~~--~~~-g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~  306 (328)
                      ++|+|++++.+++..  ..+ ++||+++++++|+.|+++.+.+.+|.+..+ ..|.     ..++     .....++++|
T Consensus       236 v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~-----~~~~~~d~~k  305 (338)
T 1udb_A          236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-----REGD-----LPAYWADASK  305 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC-----CTTC-----CSBCCBCCHH
T ss_pred             HHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC-----CCCc-----hhhhhcCHHH
Confidence            999999999998753  223 599999999999999999999999976322 1111     0111     1234567788


Q ss_pred             HH-HCCCCcccccHHHHHHHhh
Q 020254          307 AK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       307 ~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                      ++ .|||+|+++ ++++|++++
T Consensus       306 ~~~~lG~~p~~~-l~~~l~~~~  326 (338)
T 1udb_A          306 ADRELNWRVTRT-LDEMAQDTW  326 (338)
T ss_dssp             HHHHHCCCCCCC-HHHHHHHHH
T ss_pred             HHHHcCCCcCCC-HHHHHHHHH
Confidence            85 589999995 999999876

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.7e-36  Score=267.49  Aligned_cols=289  Identities=17%  Similarity=0.107  Sum_probs=209.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-----CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC---CcEEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVN   95 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vi~   95 (328)
                      |+|||||||||||++|+++|+++|     ++|++++|++.... . .. ....+..+|+.|.+.+.+++++   +|+|||
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih   78 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-ED-NPINYVQCDISDPDDSQAKLSPLTDVTHVFY   78 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-CS-SCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-cc-CceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence            689999999999999999999999     99999999876543 1 11 1111445799999999999987   999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEE-------EEecccceeecCC--CcccccCCCCCC--
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV-------LVSATALGYYGTS--ETEVFDESSPSG--  164 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v-------~~Ss~~v~~yg~~--~~~~~~e~~~~~--  164 (328)
                      +|+...      .++...++.|+.++.+++++|++...+++++|       |+||.++  ||..  ...+++|+.+..  
T Consensus        79 ~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v--yg~~~~~~~~~~E~~~~~~~  150 (364)
T 2v6g_A           79 VTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES--YGKIESHDPPYTEDLPRLKY  150 (364)
T ss_dssp             CCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG--TTTSCCCCSSBCTTSCCCSS
T ss_pred             CCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh--ccccccCCCCCCccccCCcc
Confidence            999641      24678889999999999999998322788887       7999988  9874  245678876643  


Q ss_pred             -CchHHHHHHHHHHHHhcccCC-CeEEEEEeceEEcCCCcch-hhhHHH--HHH---HcCCCC---CCC---Cccccccc
Q 020254          165 -NDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGAL-AKMIPL--FMM---FAGGPL---GSG---QQWFSWIH  230 (328)
Q Consensus       165 -~~y~~k~~~~~~~~~~~~~~~-~~~~ilRp~~v~g~~~~~~-~~~~~~--~~~---~~~~~~---~~~---~~~~~~i~  230 (328)
                       ..|+   ..|.....+...++ ++++++||+.|||++.... ..+...  +..   ..+.++   +++   ....++++
T Consensus       151 ~~~y~---~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~  227 (364)
T 2v6g_A          151 MNFYY---DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSD  227 (364)
T ss_dssp             CCHHH---HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEE
T ss_pred             chhhH---HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCc
Confidence             2342   24444444444456 9999999999999976432 222222  222   245543   333   34578899


Q ss_pred             HHHHHHHHHHHhhCCC-CCceEEecCCCccCHHHHHHHHHHHhCCCC-CC--CCcHHHHHHH-------------hcCcc
Q 020254          231 LDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WL--PVPEFALKAV-------------LGEGA  293 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~-~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~-~~--~~p~~~~~~~-------------~~~~~  293 (328)
                      ++|+|++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+. .+  .+|.+.....             .+...
T Consensus       228 v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (364)
T 2v6g_A          228 ADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTP  307 (364)
T ss_dssp             HHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCc
Confidence            9999999999998865 345999999999999999999999999763 23  4554322111             11000


Q ss_pred             e---eee----------cC-cccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          294 F---VVL----------EG-QRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       294 ~---~~~----------~~-~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      .   ...          .. ..++++|+++|||+|.++ ++++|++++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~e~l~~~~  354 (364)
T 2v6g_A          308 TKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRN-SKNAFISWI  354 (364)
T ss_dssp             CCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCC-HHHHHHHHH
T ss_pred             cccccccccchhhhccccchhhcchHHHHhcCCCCCCC-HHHHHHHHH
Confidence            0   110          33 478888997799999885 999999876

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-37  Score=272.52  Aligned_cols=298  Identities=16%  Similarity=0.137  Sum_probs=213.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCC-------CCccccCceeecCChhhHhhcCC--Cc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPG-------KKTRFFPGVMIAEEPQWRDCIQG--ST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~--~d   91 (328)
                      ||+|||||||||||++++++|+++|++|++++|++...  ..+...       .....+..+|+.|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999986541  111100       01112446799999999888874  79


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC---CcEEEEecccceeecCCCcccccCCCCC--CCc
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPS--GND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~  166 (328)
                      +|||+|+.... ......+...+++|+.++.++++++.+  .++   +++|++||.++  ||.....+++|+.+.  ...
T Consensus        81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~iv~~SS~~v--~g~~~~~~~~E~~~~~~~~~  155 (372)
T 1db3_A           81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRF--LGLEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSP  155 (372)
T ss_dssp             EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEGGG--GTTCCSSSBCTTSCCCCCSH
T ss_pred             EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCCCcEEEEeCChhh--hCCCCCCCCCccCCCCCCCh
Confidence            99999997432 233445678889999999999999998  566   79999999998  997766678887764  345


Q ss_pred             h-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHH-HH-HHHcCCC----CCCCCcccccccHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~D~a~~  237 (328)
                      | .+|...|.....+....+++++++|++++|||+...  ....+. .+ ....+.+    ++++++.++++|++|+|++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  235 (372)
T 1db3_A          156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHH
Confidence            7 778777777776666668999999999999997432  112222 22 2234432    2677889999999999999


Q ss_pred             HHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHH-HHH---------HHhc-------C--ccee
Q 020254          238 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEF-ALK---------AVLG-------E--GAFV  295 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~---~p~~-~~~---------~~~~-------~--~~~~  295 (328)
                      ++.+++.+. .++||+++++++|+.|+++.+.+.+|.+..+.   .|.+ .+.         ...+       .  ....
T Consensus       236 ~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (372)
T 1db3_A          236 QWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPA  314 (372)
T ss_dssp             HHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCC
T ss_pred             HHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCC
Confidence            999998765 57999999999999999999999999752211   1111 000         0000       0  0111


Q ss_pred             eecCcccCchHHHH-CCCCcccccHHHHHHHhh
Q 020254          296 VLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       296 ~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l  327 (328)
                      ......++++|+++ |||+|+++ ++++|++++
T Consensus       315 ~~~~~~~d~~k~~~~lG~~p~~~-l~e~l~~~~  346 (372)
T 1db3_A          315 EVETLLGDPTKAHEKLGWKPEIT-LREMVSEMV  346 (372)
T ss_dssp             C-CCCCBCCHHHHHHHCCCCCSC-HHHHHHHHH
T ss_pred             chhhhccCHHHHHHHhCCccccC-HHHHHHHHH
Confidence            12234567888864 99999985 999999986

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=4.9e-37  Score=268.90  Aligned_cols=298  Identities=14%  Similarity=0.090  Sum_probs=217.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc--cCC--CCCccccCceeecCChhhHhhcCC--CcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFP--GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~--~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~   96 (328)
                      .|+|||||||||||++++++|+++|++|++++|++.....  +..  ......+..+|+.|.+++.+++++  +|+|||+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            4799999999999999999999999999999998764321  100  000112446799999999988874  7999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCC-CcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVC  172 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~  172 (328)
                      |+... ...+..++...+++|+.++.++++++.+  .++ +++|++||.++  ||.....+++|+.+.  ...| .+|..
T Consensus        83 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~e~~~~~~~~~Y~~sK~~  157 (345)
T 2z1m_A           83 AAQSF-VGVSFEQPILTAEVDAIGVLRILEALRT--VKPDTKFYQASTSEM--FGKVQEIPQTEKTPFYPRSPYAVAKLF  157 (345)
T ss_dssp             CCCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             CCCcc-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEEechhh--cCCCCCCCCCccCCCCCCChhHHHHHH
Confidence            99642 1122345678899999999999999998  565 89999999998  998777778887764  3457 77877


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHH-HH-HHHcCCC----CCCCCcccccccHHHHHHHHHHHhhC
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .|.....+..+.+++++++|+.++|||+...  ....+. .+ ....+..    .+.+...++++|++|+|++++.+++.
T Consensus       158 ~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~  237 (345)
T 2z1m_A          158 GHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQ  237 (345)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            7777766666568999999999999997432  212222 12 2233432    25667788999999999999999987


Q ss_pred             CCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhcC---------cceeeecCcccCchHHH-HCC
Q 020254          245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLGE---------GAFVVLEGQRVVPARAK-ELG  311 (328)
Q Consensus       245 ~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~---~p~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~lG  311 (328)
                      +. .++||+++++++++.|+++.+.+.+|.+..+.   +|.+.+....+.         ..........++++|++ .||
T Consensus       238 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  316 (345)
T 2z1m_A          238 PE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLG  316 (345)
T ss_dssp             SS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHC
T ss_pred             CC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcC
Confidence            65 57999999999999999999999999863221   232211100000         00111233456788886 589


Q ss_pred             CCcccccHHHHHHHhh
Q 020254          312 FPFKYRYVKDALKAIM  327 (328)
Q Consensus       312 ~~p~~~~~~~~l~~~l  327 (328)
                      |+|+++ ++++|++++
T Consensus       317 ~~p~~~-~~~~l~~~~  331 (345)
T 2z1m_A          317 WKPRTT-FDELVEIMM  331 (345)
T ss_dssp             CCCCSC-HHHHHHHHH
T ss_pred             CcccCC-HHHHHHHHH
Confidence            999984 999999876

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.3e-37  Score=267.19  Aligned_cols=271  Identities=13%  Similarity=0.084  Sum_probs=203.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~  101 (328)
                      |+|||||||||||++|+++|+ +|++|++++|++.             ...+|+.|++.+.+++++  +|+|||+|+...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   66 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA   66 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------cccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence            589999999999999999999 8999999999862             335799999999999875  999999999642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~  178 (328)
                      . ......+...++.|+.++.++++++++  .++ ++||+||.++  ||.....+++|+++..  +.| .+|...|....
T Consensus        67 ~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  140 (299)
T 1n2s_A           67 V-DKAESEPELAQLLNATSVEAIAKAANE--TGA-WVVHYSTDYV--FPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (299)
T ss_dssp             H-HHHTTCHHHHHHHHTHHHHHHHHHHTT--TTC-EEEEEEEGGG--SCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             H-hhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEecccE--EeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence            1 112345678899999999999999998  566 7999999998  9987767888887754  345 55665555554


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCC--C--CCceEE
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP--S--YRGVIN  252 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~--~~g~~~  252 (328)
                      .+.    .+++++||+++||++... ...+..  ....+.++ ..+++.++++|++|+|++++.+++.+  .  .+++||
T Consensus       141 ~~~----~~~~ilRp~~v~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~  214 (299)
T 1n2s_A          141 DNC----PKHLIFRTSWVYAGKGNNFAKTMLR--LAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH  214 (299)
T ss_dssp             HHC----SSEEEEEECSEECSSSCCHHHHHHH--HHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred             HhC----CCeEEEeeeeecCCCcCcHHHHHHH--HHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEE
Confidence            432    389999999999997542 112221  22344443 22347899999999999999999875  2  267999


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCC-CCC------CcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHH
Q 020254          253 GTAPNPVRLAEMCDHLGNVLGRPS-WLP------VPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALK  324 (328)
Q Consensus       253 i~~~~~~~~~e~~~~i~~~~g~~~-~~~------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~  324 (328)
                      +++++++|++|+++.+.+.+|.+. .++      .+...    ... .........++++|+++ |||+|+  +++++|+
T Consensus       215 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l~  287 (299)
T 1n2s_A          215 LVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSA----YPT-PASRPGNSRLNTEKFQRNFDLILP--QWELGVK  287 (299)
T ss_dssp             CCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTT----SCC-SSCCCSBCCBCCHHHHHHHTCCCC--BHHHHHH
T ss_pred             EeCCCCCCHHHHHHHHHHHhCCCcccccccccccccccc----ccC-cCCCCCceeeeHHHHHHhcCCCCC--CHHHHHH
Confidence            999999999999999999998652 111      11100    000 01112346778888865 899998  5999999


Q ss_pred             Hhh
Q 020254          325 AIM  327 (328)
Q Consensus       325 ~~l  327 (328)
                      +++
T Consensus       288 ~~~  290 (299)
T 1n2s_A          288 RML  290 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.4e-36  Score=263.29  Aligned_cols=291  Identities=14%  Similarity=0.090  Sum_probs=213.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-CCCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~   92 (328)
                      .++|+||||||+||||++|+++|+++|       ++|++++|+.......  ......+..+|+.|++.+.+++ .++|+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG--FSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT--CCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc--cCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            356799999999999999999999999       8999999986543221  1111113457999999999988 48999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-----CCcEEEEecccceeecCCCcccccCCCCCC--C
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-----VRPSVLVSATALGYYGTSETEVFDESSPSG--N  165 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~  165 (328)
                      |||+|+...  .....++...+++|+.++.++++++.+  .+     ++++|++||.++  |+.....+++|+++..  .
T Consensus        90 vih~A~~~~--~~~~~~~~~~~~~nv~g~~~l~~~~~~--~~~~~~~~~~iv~~SS~~~--~~~~~~~~~~E~~~~~~~~  163 (342)
T 2hrz_A           90 IFHLAAIVS--GEAELDFDKGYRINLDGTRYLFDAIRI--ANGKDGYKPRVVFTSSIAV--FGAPLPYPIPDEFHTTPLT  163 (342)
T ss_dssp             EEECCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEGGG--CCSSCCSSBCTTCCCCCSS
T ss_pred             EEECCccCc--ccccccHHHHHHHHHHHHHHHHHHHHh--cccccCCCcEEEEeCchHh--hCCCCCCCcCCCCCCCCcc
Confidence            999999642  122345678899999999999999988  44     789999999988  9876556788888743  4


Q ss_pred             ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEc-CCCc--chhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLG-KDGG--ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g-~~~~--~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~  236 (328)
                      .| .+|...|.....+....+++++++|++.+|| |+..  ....++..+  ....+.++   ..++...+++|++|+|+
T Consensus       164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~  243 (342)
T 2hrz_A          164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVG  243 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHH
Confidence            56 7777777777666666689999999999998 6531  112233322  23345432   34466778999999999


Q ss_pred             HHHHHhhCCC----CCceEEecCCCccCHHHHHHHHHHHhCCCC--CC-CCcHHHHHHHhcCcceeeecCcccCchHHHH
Q 020254          237 LIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE  309 (328)
Q Consensus       237 ~~~~~~~~~~----~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~--~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (328)
                      +++.++..+.    .+++||++ ++.+++.|+++.+.+.+|.+.  .+ ..|..........      ....++++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~k~~~  316 (342)
T 2hrz_A          244 FLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEG------WAPGFEAKRARE  316 (342)
T ss_dssp             HHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTT------SCCCBCCHHHHH
T ss_pred             HHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcc------cccccChHHHHH
Confidence            9999998753    35699995 567999999999999998652  11 1222211111111      123578888877


Q ss_pred             CCCCcccccHHHHHHHhh
Q 020254          310 LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       310 lG~~p~~~~~~~~l~~~l  327 (328)
                      |||+|+++ ++++|++++
T Consensus       317 lG~~p~~~-l~e~l~~~~  333 (342)
T 2hrz_A          317 LGFTAESS-FEEIIQVHI  333 (342)
T ss_dssp             TTCCCCSS-HHHHHHHHH
T ss_pred             cCCCCCCC-HHHHHHHHH
Confidence            99999984 999999986

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=1e-36  Score=270.45  Aligned_cols=290  Identities=16%  Similarity=0.138  Sum_probs=212.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cccCCCC----C-ccccCceeecCChhhHhhcCC--C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPGK----K-TRFFPGVMIAEEPQWRDCIQG--S   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~--~   90 (328)
                      +|+|||||||||||++|++.|+++|++|++++|+....     ..+....    . ...+..+|+.|.+.+.+++++  +
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            36999999999999999999999999999999987641     1111000    0 112345788899999888874  7


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-----cEEEEecccceeecCCCcccccCCCCC--
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLVSATALGYYGTSETEVFDESSPS--  163 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~v~~Ss~~v~~yg~~~~~~~~e~~~~--  163 (328)
                      |+|||+|+.... ......+...+++|+.++.++++++.+  .+++     +|||+||.++  ||.... +++|+.+.  
T Consensus       108 d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~~~~~~v~~SS~~v--yg~~~~-~~~E~~~~~~  181 (381)
T 1n7h_A          108 DEVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRS--HTIDSGRTVKYYQAGSSEM--FGSTPP-PQSETTPFHP  181 (381)
T ss_dssp             SEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEGGG--GTTSCS-SBCTTSCCCC
T ss_pred             CEEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCccCCccEEEEeCcHHH--hCCCCC-CCCCCCCCCC
Confidence            999999996421 112345678889999999999999988  4444     9999999998  997665 78887764  


Q ss_pred             CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc--hhhhHH-HH-HHHcCCC----CCCCCcccccccHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDI  234 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~D~  234 (328)
                      ...| .+|...|.....+....+++++++|++++|||+...  ....+. .+ ....+.+    +++++..++++|++|+
T Consensus       182 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dv  261 (381)
T 1n7h_A          182 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY  261 (381)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHH
Confidence            3456 777777777766665568999999999999997532  112222 22 2233432    2667888999999999


Q ss_pred             HHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CC
Q 020254          235 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LG  311 (328)
Q Consensus       235 a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG  311 (328)
                      |++++.+++.+. .++||+++++++++.|+++.+.+.+|.+..  +.+...       ...........++++|+++ ||
T Consensus       262 a~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~lG  333 (381)
T 1n7h_A          262 VEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQR-------YFRPAEVDNLQGDASKAKEVLG  333 (381)
T ss_dssp             HHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGG-------GSCSSCCCBCCBCCHHHHHHHC
T ss_pred             HHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcc-------cCCccccccccCCHHHHHHhcC
Confidence            999999998765 589999999999999999999999997521  111100       0001112334567888865 89


Q ss_pred             CCcccccHHHHHHHhh
Q 020254          312 FPFKYRYVKDALKAIM  327 (328)
Q Consensus       312 ~~p~~~~~~~~l~~~l  327 (328)
                      |+|+++ ++++|++++
T Consensus       334 ~~p~~~-l~e~l~~~~  348 (381)
T 1n7h_A          334 WKPQVG-FEKLVKMMV  348 (381)
T ss_dssp             CCCCSC-HHHHHHHHH
T ss_pred             CcccCC-HHHHHHHHH
Confidence            999885 999999876

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=2.6e-35  Score=255.57  Aligned_cols=288  Identities=17%  Similarity=0.230  Sum_probs=196.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCc---ccccCCCC---CccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSK---AELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      |+|||||||||||++|+++|+++|++|++++| ++..   ...+....   ....+..+|+.|.+++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            68999999999999999999999999999998 5422   11110000   00114457999999999999999999999


Q ss_pred             CCCCCCCCCChhH-HHHHHHhhhhhHHHHHHHHhcCCC-CCCcEEEEecccceeecCC-CcccccCCCCC----------
Q 020254           97 AGTPIGTRWSSEI-KKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTS-ETEVFDESSPS----------  163 (328)
Q Consensus        97 a~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~Ss~~v~~yg~~-~~~~~~e~~~~----------  163 (328)
                      |+..   .....+ ....+++|+.++.+++++|.+  . +++++||+||.++. |+.. ...+++|+.+.          
T Consensus        82 A~~~---~~~~~~~~~~~~~~nv~gt~~l~~aa~~--~~~~~~iV~~SS~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~p  155 (322)
T 2p4h_X           82 ASPI---DFAVSEPEEIVTKRTVDGALGILKACVN--SKTVKRFIYTSSGSAV-SFNGKDKDVLDESDWSDVDLLRSVKP  155 (322)
T ss_dssp             CCCC-----------CHHHHHHHHHHHHHHHHHTT--CSSCCEEEEEEEGGGT-SCSSSCCSEECTTCCCCHHHHHHHCC
T ss_pred             CCcc---cCCCCChHHHHHHHHHHHHHHHHHHHHh--cCCccEEEEeccHHHc-ccCCCCCeecCCccccchhhhcccCc
Confidence            9743   222222 245889999999999999998  5 68899999998742 4432 23356666531          


Q ss_pred             CC-ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GN-DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~-~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .. .| .+|...|.....+...++++++++||++|||+.... ........ ....+.+...+...++++|++|+|++++
T Consensus       156 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~  235 (322)
T 2p4h_X          156 FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHI  235 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHH
Confidence            11 47 777777766655555569999999999999997532 11112111 2233332211113348999999999999


Q ss_pred             HHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccH
Q 020254          240 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  319 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~  319 (328)
                      .++..+...|.|| ++++.+|+.|+++.+.+.++..   ++|...   ....... . ....++++|+++|||+|+++ +
T Consensus       236 ~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~---~~~~~~---~~~~~~~-~-~~~~~d~~k~~~lG~~p~~~-~  305 (322)
T 2p4h_X          236 YLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEY---QILTVD---ELKEIKG-A-RLPDLNTKKLVDAGFDFKYT-I  305 (322)
T ss_dssp             HHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTS---CCCCTT---TTTTCCC-E-ECCEECCHHHHHTTCCCCCC-H
T ss_pred             HHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCC---CCCCCc---cccCCCC-C-cceecccHHHHHhCCccCCC-H
Confidence            9998765567888 5667899999999999877421   122110   0111111 1 34667888998899999995 9


Q ss_pred             HHHHHHhh
Q 020254          320 KDALKAIM  327 (328)
Q Consensus       320 ~~~l~~~l  327 (328)
                      +++|++++
T Consensus       306 ~~~l~~~~  313 (322)
T 2p4h_X          306 EDMFDDAI  313 (322)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999876

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=5.9e-36  Score=259.05  Aligned_cols=281  Identities=13%  Similarity=0.178  Sum_probs=207.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  100 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  100 (328)
                      +|||||||||||++|+++|+++  |++|++++|+.....    ..   .+..+|+.|++.+.++++  ++|+|||+|+..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   73 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----GI---KFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL   73 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----TC---CEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----Cc---eEEEecCCCHHHHHHHHhhcCCcEEEECCccc
Confidence            5999999999999999999998  899999999765432    11   145679999999999987  899999999863


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC-cccccCCCCC--CCch-HHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPS--GNDY-LAEVCREWE  176 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~-~~~~~e~~~~--~~~y-~~k~~~~~~  176 (328)
                      ..  .....+...+++|+.++.++++++++  .+++++||+||.++  |+... ..+.+|+.+.  .+.| .+|...|..
T Consensus        74 ~~--~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  147 (317)
T 3ajr_A           74 SA--KGEKDPALAYKVNMNGTYNILEAAKQ--HRVEKVVIPSTIGV--FGPETPKNKVPSITITRPRTMFGVTKIAAELL  147 (317)
T ss_dssp             HH--HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--CCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHH
T ss_pred             CC--ccccChHHHhhhhhHHHHHHHHHHHH--cCCCEEEEecCHHH--hCCCCCCCCccccccCCCCchHHHHHHHHHHH
Confidence            21  12345678889999999999999998  68899999999998  88643 3455666653  4467 778777777


Q ss_pred             HHHhcccCCCeEEEEEeceEEcCCCc----chhhhHHHH-HHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCCCC-
Q 020254          177 GTALKVNKDVRLALIRIGIVLGKDGG----ALAKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY-  247 (328)
Q Consensus       177 ~~~~~~~~~~~~~ilRp~~v~g~~~~----~~~~~~~~~-~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-  247 (328)
                      ...+...++++++++||+.+||+...    ....+...+ ....+.+   .+.++..++++|++|+|++++.++..+.. 
T Consensus       148 ~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  227 (317)
T 3ajr_A          148 GQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK  227 (317)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG
T ss_pred             HHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccc
Confidence            66665556899999999999997521    111222322 2233333   25667889999999999999999987642 


Q ss_pred             ---CceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHH
Q 020254          248 ---RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL  323 (328)
Q Consensus       248 ---~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l  323 (328)
                         +++||+++ ..+++.|+++.+.+.+|.......|... .....      .....++++|++ .|||+|+++ ++++|
T Consensus       228 ~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~~~~~~-~~~~~------~~~~~~d~~k~~~~lG~~p~~~-~~~~l  298 (317)
T 3ajr_A          228 LVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEYKEDFR-DKIAA------TWPESLDSSEASNEWGFSIEYD-LDRTI  298 (317)
T ss_dssp             CSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEECCCHH-HHHHT------TSCSCBCCHHHHHHHCCCCCCC-HHHHH
T ss_pred             cccCceEecCC-ccccHHHHHHHHHHHCCccccccccccc-hhhcc------ccccccCHHHHHHHcCCCCCCC-HHHHH
Confidence               36999986 5799999999999999842211112111 11111      012456788886 589999995 99999


Q ss_pred             HHhh
Q 020254          324 KAIM  327 (328)
Q Consensus       324 ~~~l  327 (328)
                      ++++
T Consensus       299 ~~~~  302 (317)
T 3ajr_A          299 DDMI  302 (317)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=7.6e-36  Score=260.57  Aligned_cols=289  Identities=20%  Similarity=0.219  Sum_probs=197.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCC---CccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ++|+||||||+||||++|+++|+++||+|++++|++....   .+....   ....+..+|+.|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            4579999999999999999999999999999999876321   110100   0011345699999999999999999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCC-cccccCCCC-----------
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSE-TEVFDESSP-----------  162 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~-~~~~~e~~~-----------  162 (328)
                      +|+.. . ..........+++|+.++.+++++|.+  .+ ++++||+||.++. |+... ..+++|+.+           
T Consensus        84 ~A~~~-~-~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~riV~~SS~~~~-~~~~~~~~~~~E~~~~~~~~~~~~~~  158 (337)
T 2c29_D           84 VATPM-D-FESKDPENEVIKPTIEGMLGIMKSCAA--AKTVRRLVFTSSAGTV-NIQEHQLPVYDESCWSDMEFCRAKKM  158 (337)
T ss_dssp             CCCCC-C-SSCSSHHHHTHHHHHHHHHHHHHHHHH--HSCCCEEEEECCGGGT-SCSSSCCSEECTTCCCCHHHHHHHCC
T ss_pred             ecccc-C-CCCCChHHHHHHHHHHHHHHHHHHHHh--CCCccEEEEeeeHhhc-ccCCCCCcccCcccCCchhhhcccCC
Confidence            99864 1 112223346889999999999999988  45 7899999998741 55332 234666643           


Q ss_pred             CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH-HHHcCCCC--CCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~--~~~~~~~~~i~v~D~a~~  237 (328)
                      +...| .+|...|.....+...++++++++||++||||.... ........ ....+.+.  ... ....++|++|+|++
T Consensus       159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~i~v~Dva~a  237 (337)
T 2c29_D          159 TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-RQGQFVHLDDLCNA  237 (337)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-TEEEEEEHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-CCCCEEEHHHHHHH
Confidence            22246 777777776655554468999999999999997432 11111111 11223221  111 12349999999999


Q ss_pred             HHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccc
Q 020254          238 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYR  317 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~  317 (328)
                      ++.+++.+...|.|++++ ..+++.|+++.+.+.++..   .+|...     ... ........++++|+++|||+|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~-----~~~-~~~~~~~~~d~~k~~~lG~~p~~~  307 (337)
T 2c29_D          238 HIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEY---NIPTEF-----KGV-DENLKSVCFSSKKLTDLGFEFKYS  307 (337)
T ss_dssp             HHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTS---CCCSCC-----TTC-CTTCCCCEECCHHHHHHTCCCCCC
T ss_pred             HHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCc---cCCCCC-----Ccc-cCCCccccccHHHHHHcCCCcCCC
Confidence            999998766567887655 4589999999999987421   111100     000 001234567788888899999996


Q ss_pred             cHHHHHHHhh
Q 020254          318 YVKDALKAIM  327 (328)
Q Consensus       318 ~~~~~l~~~l  327 (328)
                       ++++|++++
T Consensus       308 -l~e~l~~~~  316 (337)
T 2c29_D          308 -LEDMFTGAV  316 (337)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             999999876

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=4e-36  Score=283.89  Aligned_cols=298  Identities=17%  Similarity=0.237  Sum_probs=217.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChh-hHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~vi~~a~   98 (328)
                      .++|+|||||||||||++|+++|+++ |++|++++|++........... ..+..+|+.|.++ ++++++++|+|||+|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~-v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa  391 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVA  391 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTT-EEEEECCTTTCHHHHHHHHHHCSEEEECCC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCc-eEEEECCCCCcHHHHHHhhcCCCEEEECce
Confidence            35679999999999999999999998 8999999998765443322111 1134568888765 7778889999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC---------CCch-H
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-L  168 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~---------~~~y-~  168 (328)
                      ..... ....++...++.|+.++.++++++.+  .+ +++||+||.++  ||.....+++|+.+.         .+.| .
T Consensus       392 ~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~-~r~V~~SS~~v--yg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~  465 (660)
T 1z7e_A          392 IATPI-EYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  465 (660)
T ss_dssp             CCCTH-HHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCSSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             ecCcc-ccccCHHHHHHhhhHHHHHHHHHHHH--hC-CEEEEEecHHH--cCCCCCcccCCCccccccCcccCCCCCcHH
Confidence            74221 12345678889999999999999998  56 89999999998  987766677787642         2246 6


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch-------hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~  236 (328)
                      +|...|.....+....+++++++||+++||++....       ..++..+  ....+.++   +++++.++++|++|+|+
T Consensus       466 sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~  545 (660)
T 1z7e_A          466 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  545 (660)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHH
Confidence            777777776665555689999999999999975321       1222222  33455553   56678899999999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCC-ccCHHHHHHHHHHHhCCCC-CCCCcHHH------HHHHhcCcceeeecCcccCch
Q 020254          237 LIYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA------LKAVLGEGAFVVLEGQRVVPA  305 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~-~~~~~e~~~~i~~~~g~~~-~~~~p~~~------~~~~~~~~~~~~~~~~~~~~~  305 (328)
                      +++.++..+.   .+++||+++++ ++|+.|+++.+.+.+|.+. .+.+|.+.      .....+.. ........++++
T Consensus       546 ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~  624 (660)
T 1z7e_A          546 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG-YQDVEHRKPSIR  624 (660)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTT-CCCCSCCCBCCH
T ss_pred             HHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhcccccccc-ccchhhcccCHH
Confidence            9999998754   34599999986 8999999999999998652 22223210      00111110 011234667888


Q ss_pred             HHHH-CCCCcccccHHHHHHHhh
Q 020254          306 RAKE-LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       306 ~~~~-lG~~p~~~~~~~~l~~~l  327 (328)
                      |+++ |||+|+++ ++++|++++
T Consensus       625 ka~~~LG~~p~~~-l~egl~~~i  646 (660)
T 1z7e_A          625 NAHRCLDWEPKID-MQETIDETL  646 (660)
T ss_dssp             HHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             HHHHhcCCCccCc-HHHHHHHHH
Confidence            8864 89999985 999999886

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=4.3e-36  Score=262.20  Aligned_cols=288  Identities=17%  Similarity=0.185  Sum_probs=193.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-----CCCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ++|+|||||||||||++|+++|+++||+|++++|++......     ........+...|+.|.+.+.++++++|+|||+
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            367999999999999999999999999999999976532110     000000113457899999999999999999999


Q ss_pred             CCCCCCCCCChhHH-HHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCC---CcccccCCCCC--------
Q 020254           97 AGTPIGTRWSSEIK-KEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS---ETEVFDESSPS--------  163 (328)
Q Consensus        97 a~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~---~~~~~~e~~~~--------  163 (328)
                      |+...   .....+ .+.+++|+.++.+++++|.+  .+ ++++||+||.++. |+..   ...+++|+.+.        
T Consensus        88 A~~~~---~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~v~r~V~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~  161 (338)
T 2rh8_A           88 ATPVH---FASEDPENDMIKPAIQGVVNVMKACTR--AKSVKRVILTSSAAAV-TINQLDGTGLVVDEKNWTDIEFLTSA  161 (338)
T ss_dssp             SSCCC---C---------CHHHHHHHHHHHHHHHH--CTTCCEEEEECCHHHH-HHHHHTCSCCCCCTTTTTCC------
T ss_pred             CCccC---CCCCCcHHHHHHHHHHHHHHHHHHHHH--cCCcCEEEEEecHHHe-ecCCcCCCCcccChhhccchhhcccc
Confidence            98641   122222 34889999999999999998  54 8999999998731 4321   11255665421        


Q ss_pred             ---CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc-hhhhHHHH-HHHcCCCC--CC------CCcccccc
Q 020254          164 ---GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GS------GQQWFSWI  229 (328)
Q Consensus       164 ---~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~--~~------~~~~~~~i  229 (328)
                         ...| .+|...|.....+...++++++++||++||||.... .......+ ....+.+.  +.      +...++++
T Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i  241 (338)
T 2rh8_A          162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIA  241 (338)
T ss_dssp             -CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEE
Confidence               1147 777777776665554468999999999999997532 11111111 11222211  10      01224799


Q ss_pred             cHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH
Q 020254          230 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE  309 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (328)
                      |++|+|++++.+++.+...|.|+++++ .+++.|+++.+.+.++..   .+|..     .+.... . ....++++|+++
T Consensus       242 ~v~Dva~a~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~~~~~~---~~~~~-----~~~~~~-~-~~~~~d~~k~~~  310 (338)
T 2rh8_A          242 HVEDVCRAHIFVAEKESASGRYICCAA-NTSVPELAKFLSKRYPQY---KVPTD-----FGDFPP-K-SKLIISSEKLVK  310 (338)
T ss_dssp             EHHHHHHHHHHHHHCTTCCEEEEECSE-EECHHHHHHHHHHHCTTS---CCCCC-----CTTSCS-S-CSCCCCCHHHHH
T ss_pred             EHHHHHHHHHHHHcCCCcCCcEEEecC-CCCHHHHHHHHHHhCCCC---CCCCC-----CCCCCc-C-cceeechHHHHH
Confidence            999999999999987666678988764 589999999999887631   11111     000000 0 125778888988


Q ss_pred             CCCCcccccHHHHHHHhh
Q 020254          310 LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       310 lG~~p~~~~~~~~l~~~l  327 (328)
                      |||+|++ +++++|++++
T Consensus       311 lG~~p~~-~l~~gl~~~~  327 (338)
T 2rh8_A          311 EGFSFKY-GIEEIYDESV  327 (338)
T ss_dssp             HTCCCSC-CHHHHHHHHH
T ss_pred             hCCCCCC-CHHHHHHHHH
Confidence            9999999 5999999876

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=9.2e-35  Score=276.69  Aligned_cols=293  Identities=20%  Similarity=0.218  Sum_probs=208.8

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----CCCccccCceeecCChhhHhhcC--CCcE
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ--GSTA   92 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~--~~d~   92 (328)
                      ..++|+||||||+||||++|+++|+++|++|++++|+.........     ......+..+|+.|++.+.++++  ++|+
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            3456899999999999999999999999999999997654211000     00001144579999999999887  8999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC----cccccCCCCC--CCc
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDESSPS--GND  166 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~----~~~~~e~~~~--~~~  166 (328)
                      |||+|+..... .....+...+++|+.++.++++++++  .+++++|++||.++  ||...    ..+++|+.+.  ...
T Consensus        88 Vih~A~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~iV~~SS~~v--yg~~~~~~~~~~~~E~~~~~p~~~  162 (699)
T 1z45_A           88 VIHFAGLKAVG-ESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATV--YGDATRFPNMIPIPEECPLGPTNP  162 (699)
T ss_dssp             EEECCSCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCCGGGSTTCCSBCTTSCCCCCSH
T ss_pred             EEECCcccCcC-ccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECcHHH--hCCCccccccCCccccCCCCCCCh
Confidence            99999964211 11234567889999999999999998  67889999999998  88543    2456676653  345


Q ss_pred             h-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcc---------hhhhHHHH-HHHcC--CCC---C------CC
Q 020254          167 Y-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------SG  222 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~~~~~--~~~---~------~~  222 (328)
                      | .+|...|.....+...  .+++++++||+++||++...         ...+++.+ ....+  .++   +      ++
T Consensus       163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  242 (699)
T 1z45_A          163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  242 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCC
Confidence            6 7777777766655443  68999999999999985311         12344433 22222  232   3      46


Q ss_pred             CcccccccHHHHHHHHHHHhhCC------C-CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCccee
Q 020254          223 QQWFSWIHLDDIVNLIYEALSNP------S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV  295 (328)
Q Consensus       223 ~~~~~~i~v~D~a~~~~~~~~~~------~-~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~  295 (328)
                      .+.+++||++|+|++++.+++..      . .+++||+++++++++.|+++.+.+.+|.+..+.....    ..++    
T Consensus       243 ~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----~~~~----  314 (699)
T 1z45_A          243 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR----RAGD----  314 (699)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------------
T ss_pred             CeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCC----CCCc----
Confidence            78899999999999999988631      1 2459999999999999999999999998733221110    0111    


Q ss_pred             eecCcccCchHHH-HCCCCcccccHHHHHHHhh
Q 020254          296 VLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       296 ~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~~~l  327 (328)
                       .....++++|++ .|||+|+++ ++++|++++
T Consensus       315 -~~~~~~d~~ka~~~LG~~p~~~-l~egl~~~~  345 (699)
T 1z45_A          315 -VLNLTAKPDRAKRELKWQTELQ-VEDSCKDLW  345 (699)
T ss_dssp             -CCCCCBCCHHHHHHTCCCCCCC-HHHHHHHHH
T ss_pred             -cccccCCHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence             134567778885 599999995 999999986

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=9.2e-35  Score=254.16  Aligned_cols=290  Identities=17%  Similarity=0.088  Sum_probs=203.7

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccC-ceeecCChhhHhhcCCCcE
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFP-GVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~~~~~~d~   92 (328)
                      ...++|+||||||+||||++|+++|+++|++|++++|+..+...+...     .....+. .+|+.|.+.+.++++++|+
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            334568999999999999999999999999999999986543221100     0001133 5799999999999999999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC----cccccCCCC------
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDESSP------  162 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~----~~~~~e~~~------  162 (328)
                      |||+|+.....    .++...++.|+.++.++++++.+. .+++++||+||.++  |+...    ..+++|+++      
T Consensus        87 vih~A~~~~~~----~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~--~~~~~~~~~~~~~~E~~~~~~~~~  159 (342)
T 1y1p_A           87 VAHIASVVSFS----NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVS--ALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             EEECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGG--TCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             EEEeCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHH--hcCCCCCCCCcccCccccCchhhh
Confidence            99999975321    246778999999999999999842 46789999999988  75332    146777762      


Q ss_pred             ------------CCCch-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchh--hhHHH-H-HHHcCCCC---C
Q 020254          163 ------------SGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALA--KMIPL-F-MMFAGGPL---G  220 (328)
Q Consensus       163 ------------~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~--~~~~~-~-~~~~~~~~---~  220 (328)
                                  +.+.| .+|...|.....+....  +++++++||+++||+......  ..... + ....+.++   +
T Consensus       160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (342)
T 1y1p_A          160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA  239 (342)
T ss_dssp             HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred             hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccc
Confidence                        12346 77777777666554432  789999999999999753221  12222 2 33345443   2


Q ss_pred             CCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCc
Q 020254          221 SGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQ  300 (328)
Q Consensus       221 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~  300 (328)
                      .. ..++++|++|+|++++.++..+...|.+++.++.++|+.|+++.+.+.+|.+. ++.+.      ...    .....
T Consensus       240 ~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~-~~~~~------~~~----~~~~~  307 (342)
T 1y1p_A          240 LM-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT-FPADF------PDQ----GQDLS  307 (342)
T ss_dssp             TC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSC-CCCCC------CCC----CCCCC
T ss_pred             cC-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCcc-CCCCC------Ccc----ccccc
Confidence            22 57899999999999999998765445333556678999999999999998652 22110      000    01235


Q ss_pred             ccCchHHHH-CCC---CcccccHHHHHHHhhC
Q 020254          301 RVVPARAKE-LGF---PFKYRYVKDALKAIMS  328 (328)
Q Consensus       301 ~~~~~~~~~-lG~---~p~~~~~~~~l~~~l~  328 (328)
                      .++++|+++ |||   .+.. +++++|+++++
T Consensus       308 ~~d~~k~~~~lg~~~~~~~~-~l~~~l~~~~~  338 (342)
T 1y1p_A          308 KFDTAPSLEILKSLGRPGWR-SIEESIKDLVG  338 (342)
T ss_dssp             EECCHHHHHHHHHTTCCSCC-CHHHHHHHHHC
T ss_pred             cCChHHHHHHHhhcccCCcC-CHHHHHHHHHH
Confidence            567788754 777   4444 69999999874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=6.5e-34  Score=234.44  Aligned_cols=221  Identities=13%  Similarity=0.105  Sum_probs=164.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      +||+||||||||+||++|+++|+++|++|++++|++.+........   .+..+|+.|.+++.++++++|+|||+|+...
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~   79 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL---KVKKADVSSLDEVCEVCKGADAVISAFNPGW   79 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTE---EEECCCTTCHHHHHHHHTTCSEEEECCCC--
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCce---EEEEecCCCHHHHHHHhcCCCEEEEeCcCCC
Confidence            4689999999999999999999999999999999987654432221   2456899999999999999999999998631


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccc-ccCCCCCCCch-HHHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV-FDESSPSGNDY-LAEVCREWEGTA  179 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~-~~e~~~~~~~y-~~k~~~~~~~~~  179 (328)
                             .....++.|+.++.++++++++  .+++++||+||.++  |+..+..+ .++...+...| .+|...|.....
T Consensus        80 -------~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~  148 (227)
T 3dhn_A           80 -------NNPDIYDETIKVYLTIIDGVKK--AGVNRFLMVGGAGS--LFIAPGLRLMDSGEVPENILPGVKALGEFYLNF  148 (227)
T ss_dssp             -----------CCSHHHHHHHHHHHHHHH--TTCSEEEEECCSTT--SEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHT
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHH--hCCCEEEEeCChhh--ccCCCCCccccCCcchHHHHHHHHHHHHHHHHH
Confidence                   1123678899999999999999  78899999999987  44333322 22222234556 777777766666


Q ss_pred             hcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCCc
Q 020254          180 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNP  258 (328)
Q Consensus       180 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~~  258 (328)
                      +....+++++++||+.+||++.... .+.    .....++..++ .++++|++|+|++++.+++++.. +++|+++++++
T Consensus       149 ~~~~~~~~~~ilrp~~v~g~~~~~~-~~~----~~~~~~~~~~~-~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          149 LMKEKEIDWVFFSPAADMRPGVRTG-RYR----LGKDDMIVDIV-GNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEH  222 (227)
T ss_dssp             GGGCCSSEEEEEECCSEEESCCCCC-CCE----EESSBCCCCTT-SCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSC
T ss_pred             HhhccCccEEEEeCCcccCCCcccc-cee----ecCCCcccCCC-CCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehh
Confidence            6656799999999999999975321 111    11122222222 28999999999999999999884 45999999998


Q ss_pred             cCHH
Q 020254          259 VRLA  262 (328)
Q Consensus       259 ~~~~  262 (328)
                      .++.
T Consensus       223 ~~~~  226 (227)
T 3dhn_A          223 HHHH  226 (227)
T ss_dssp             CC--
T ss_pred             cccC
Confidence            8875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=8.9e-34  Score=240.16  Aligned_cols=262  Identities=16%  Similarity=0.139  Sum_probs=191.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCC--CcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~  101 (328)
                      |+||||||||+||++++++|++ |++|++++|++...    .      ...+|+.|++++.+++++  +|+|||+|+...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----~------~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   69 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----G------GYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD   69 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----T------CEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----C------CceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            5899999999999999999995 89999999987421    1      145799999999998875  999999999642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT  178 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~  178 (328)
                       ......++...+++|+.++.++++++.+  .++ ++|++||.++  |+.... +++|+.++.  ..| .+|...|....
T Consensus        70 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~iv~~SS~~~--~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~  142 (273)
T 2ggs_A           70 -VDKCEIEKEKAYKINAEAVRHIVRAGKV--IDS-YIVHISTDYV--FDGEKG-NYKEEDIPNPINYYGLSKLLGETFAL  142 (273)
T ss_dssp             -HHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTC-EEEEEEEGGG--SCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHC
T ss_pred             -hhhhhhCHHHHHHHhHHHHHHHHHHHHH--hCC-eEEEEeccee--EcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHh
Confidence             1122356778899999999999999998  555 8999999998  875543 677777654  345 44544444332


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCCceEEecC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  255 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~  255 (328)
                        .    ++++++||+.+||+.     .+...+  ....+.++ ..++ .+++++++|+|++++.++..+. .|+||+++
T Consensus       143 --~----~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~  209 (273)
T 2ggs_A          143 --Q----DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK-TGIIHVAG  209 (273)
T ss_dssp             --C----TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC-CEEEECCC
T ss_pred             --C----CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc-CCeEEECC
Confidence              2    678999999999832     122222  22334443 1122 7889999999999999998764 67999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCc-ccccHHHHH
Q 020254          256 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDAL  323 (328)
Q Consensus       256 ~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p-~~~~~~~~l  323 (328)
                       +.++++|+++.+.+.+|.+..+..|.+..     ...........++++|+++ |||+| .+ ++++++
T Consensus       210 -~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~-~l~~~~  272 (273)
T 2ggs_A          210 -ERISRFELALKIKEKFNLPGEVKEVDEVR-----GWIAKRPYDSSLDSSRARKILSTDFYTL-DLDGMV  272 (273)
T ss_dssp             -CCEEHHHHHHHHHHHTTCCSCEEEESSCT-----TCCSCCCSBCCBCCHHHHHHCSSCCCSC-CGGGCC
T ss_pred             -CcccHHHHHHHHHHHhCCChhhccccccc-----ccccCCCcccccCHHHHHHHhCCCCCCc-cccccc
Confidence             99999999999999999874332222110     0111122456788889975 99999 46 487764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=3.4e-33  Score=251.27  Aligned_cols=296  Identities=12%  Similarity=0.105  Sum_probs=199.9

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc---cCC-------------CCCccccCceeecCChh
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFP-------------GKKTRFFPGVMIAEEPQ   82 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~-------------~~~~~~~~~~d~~~~~~   82 (328)
                      ....+|+|||||||||||++|+++|++.|++|++++|++.....   +..             ......+..+|+.|++.
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            33456799999999999999999999999999999999872110   000             00001144578988888


Q ss_pred             hHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeec--CCCcccccCC
Q 020254           83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG--TSETEVFDES  160 (328)
Q Consensus        83 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg--~~~~~~~~e~  160 (328)
                      +. .+.++|+|||+|+...    ....+...+++|+.++.+++++|.+   +++++||+||.+++.+.  .....+++|+
T Consensus       145 l~-~~~~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~G~~~~~~~~~~~~~E~  216 (427)
T 4f6c_A          145 VV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTEDVTFSEA  216 (427)
T ss_dssp             CC-CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGGGSEECSSCSCCEECTT
T ss_pred             CC-CcCCCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHhCCCccCCCCCcccccc
Confidence            87 7789999999999752    2245678889999999999999998   56899999998873222  2345577887


Q ss_pred             CC-----CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch------hhhH-HHH-HHHcCCCC--CCCCc
Q 020254          161 SP-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMI-PLF-MMFAGGPL--GSGQQ  224 (328)
Q Consensus       161 ~~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~-~~~-~~~~~~~~--~~~~~  224 (328)
                      ++     +.+.| .+|...|.....+.. .|++++++||++|||+.....      ..++ ..+ ....+.++  +.++.
T Consensus       217 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (427)
T 4f6c_A          217 DVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM  295 (427)
T ss_dssp             CSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTC
T ss_pred             ccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccc
Confidence            76     45667 777777777666543 589999999999999975431      1112 222 22334433  33578


Q ss_pred             ccccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhc-------------C
Q 020254          225 WFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-------------E  291 (328)
Q Consensus       225 ~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~-------------~  291 (328)
                      .+++++++|+|++++.++..+..+++||+++++++++.|+++.+.+ +| -..++.+.|.......             .
T Consensus       296 ~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  373 (427)
T 4f6c_A          296 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE-IELVSDESFNEILQKQDMYETIGLTSVDRE  373 (427)
T ss_dssp             EECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC-CEEECHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             eEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC-CcccCHHHHHHHHHhcCchhhhhhhhcccc
Confidence            8999999999999999998876566999999999999999999998 66 2233444443322110             0


Q ss_pred             cceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          292 GAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      .....++. ....++++++||.+... -++.+++++
T Consensus       374 ~~~~~~d~-~~~~~~l~~~G~~~~~~-~~~~l~~~~  407 (427)
T 4f6c_A          374 QQLAMIDT-TLTLKIMNHISEKWPTI-TNNWLYHWA  407 (427)
T ss_dssp             SEECEECC-HHHHHHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             CCceeccH-HHHHHHHHhcCCCCCCC-CHHHHHHHH
Confidence            01111221 11123456789987642 355666654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=2.7e-33  Score=257.12  Aligned_cols=295  Identities=12%  Similarity=0.094  Sum_probs=202.6

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----------------CCCCccccCceeecCChhh
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----------------PGKKTRFFPGVMIAEEPQW   83 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~~   83 (328)
                      ...+|+|||||||||||++|+++|++.|++|++++|++.......                .......+..+|+.+++.+
T Consensus       147 ~~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          147 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             BCCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             cCCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            345689999999999999999999999999999999987321000                0000011445788888888


Q ss_pred             HhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecC--CCcccccCCC
Q 020254           84 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT--SETEVFDESS  161 (328)
Q Consensus        84 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~--~~~~~~~e~~  161 (328)
                      . ...++|+|||+|+...    .........+.|+.++.+++++|.+   +++++||+||.+++.|..  ....+++|++
T Consensus       227 ~-~~~~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~  298 (508)
T 4f6l_B          227 V-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTEDVTFSEAD  298 (508)
T ss_dssp             C-CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCTTSEECTTCSCCEECTTC
T ss_pred             C-CccCCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhhccCCccCCcCccccccc
Confidence            7 7789999999999742    1234567788999999999999998   568999999988743432  3345678877


Q ss_pred             C-----CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch------hh-hHHHHHH-HcCCCC--CCCCcc
Q 020254          162 P-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AK-MIPLFMM-FAGGPL--GSGQQW  225 (328)
Q Consensus       162 ~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~-~~~~~~~-~~~~~~--~~~~~~  225 (328)
                      +     +.+.| .+|...|.....+.. .|++++++||+.|||+.....      .. +...+.. .....+  +.++..
T Consensus       299 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~  377 (508)
T 4f6l_B          299 VYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  377 (508)
T ss_dssp             SCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred             ccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence            6     44567 777777777666543 699999999999999975432      11 2222222 223322  345788


Q ss_pred             cccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhc-------------Cc
Q 020254          226 FSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-------------EG  292 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~-------------~~  292 (328)
                      +++++++|+|++++.++..+..+++||+++++++++.|+++.+.+..  -..++.+.|.......             ..
T Consensus       378 ~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~--~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~  455 (508)
T 4f6l_B          378 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE--IELVSDESFNEILQKQDMYETIGLTSVDREQ  455 (508)
T ss_dssp             EECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC--CEEECHHHHHHHHHTTCCHHHHHHHHTGGGS
T ss_pred             EEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC--CcccCHHHHHHHHHhcCCccchhcccccccC
Confidence            99999999999999999887666799999999999999999999865  2234455554332110             00


Q ss_pred             ceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          293 AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       293 ~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                      ....++.. ....+++++||.+... -++.+++++
T Consensus       456 ~~~~~d~~-~~~~~l~~~G~~~~~~-~~~~l~~~~  488 (508)
T 4f6l_B          456 QLAMIDTT-LTLKIMNHISEKWPTI-TNNWLYHWA  488 (508)
T ss_dssp             EECEECCH-HHHHHHHHHSCCCCCC-CHHHHHHHH
T ss_pred             cceecchH-HHHHHHHHcCCCCCCC-CHHHHHHHH
Confidence            11111211 1124457789987753 466676654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=1.8e-32  Score=233.86  Aligned_cols=265  Identities=15%  Similarity=0.152  Sum_probs=190.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      |+|||||||||||++++++|+++  |++|++++|++.+...+....  ..+..+|+.|++++.++++++|+|||+|+.. 
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQG--VEVRHGDYNQPESLQKAFAGVSKLLFISGPH-   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTT--CEEEECCTTCHHHHHHHTTTCSEEEECCCCC-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcC--CeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-
Confidence            57999999999999999999998  999999999876543321110  1144579999999999999999999999852 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHh
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  180 (328)
                         .. .      +.|+.++.++++++++  .+++++||+||.++  |..            ...| ..|...|....  
T Consensus        78 ---~~-~------~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~------------~~~y~~~K~~~E~~~~--  129 (287)
T 2jl1_A           78 ---YD-N------TLLIVQHANVVKAARD--AGVKHIAYTGYAFA--EES------------IIPLAHVHLATEYAIR--  129 (287)
T ss_dssp             ---SC-H------HHHHHHHHHHHHHHHH--TTCSEEEEEEETTG--GGC------------CSTHHHHHHHHHHHHH--
T ss_pred             ---cC-c------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCC--CCC------------CCchHHHHHHHHHHHH--
Confidence               11 1      5789999999999999  78899999999887  531            1245 55655554443  


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC-CCCCCcccccccHHHHHHHHHHHhhCCC-CCceEEecCCCc
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNP  258 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~i~~~~~  258 (328)
                        ..+++++++||+.++|+...   .++.... ..+.. ...++..++++|++|+|++++.++..+. .+++||++++++
T Consensus       130 --~~~~~~~ilrp~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~  203 (287)
T 2jl1_A          130 --TTNIPYTFLRNALYTDFFVN---EGLRAST-ESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQP  203 (287)
T ss_dssp             --HTTCCEEEEEECCBHHHHSS---GGGHHHH-HHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSC
T ss_pred             --HcCCCeEEEECCEeccccch---hhHHHHh-hCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCc
Confidence              26899999999988876411   1221111 12222 2445678899999999999999998764 345999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHh---cCcce-----------eeecCcccCchHHHH-CCCCcccccHHHH
Q 020254          259 VRLAEMCDHLGNVLGRPSW-LPVPEFALKAVL---GEGAF-----------VVLEGQRVVPARAKE-LGFPFKYRYVKDA  322 (328)
Q Consensus       259 ~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~~-lG~~p~~~~~~~~  322 (328)
                      +|+.|+++.+.+.+|.+.. ...|.+.+....   +....           ........+++|+++ ||  |.. +++|+
T Consensus       204 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~-~l~e~  280 (287)
T 2jl1_A          204 WTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLT-PLKET  280 (287)
T ss_dssp             BCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCC-CHHHH
T ss_pred             CCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCC-CHHHH
Confidence            9999999999999998732 355655433211   11100           001233455677765 89  555 59999


Q ss_pred             HHHhhC
Q 020254          323 LKAIMS  328 (328)
Q Consensus       323 l~~~l~  328 (328)
                      |+++++
T Consensus       281 l~~~~~  286 (287)
T 2jl1_A          281 VKQALK  286 (287)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.98  E-value=5.9e-31  Score=224.64  Aligned_cols=265  Identities=14%  Similarity=0.130  Sum_probs=184.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      |+||||||||+||+++++.|++. |++|++++|++.+...+....  ..+..+|+.|++++.++++++|+|||+|+....
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~--v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGK--VSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTT--BEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCC--CEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc
Confidence            68999999999999999999998 999999999987655432221  124567999999999999999999999986311


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHHhcc
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV  182 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~  182 (328)
                                 ...|+.+++++++++++  .+++++||+||.+.     ...      .+..   ..+.....+...  .
T Consensus        79 -----------~~~~~~~~~~l~~aa~~--~gv~~iv~~Ss~~~-----~~~------~~~~---~~~~~~~~e~~~--~  129 (289)
T 3e48_A           79 -----------SFKRIPEVENLVYAAKQ--SGVAHIIFIGYYAD-----QHN------NPFH---MSPYFGYASRLL--S  129 (289)
T ss_dssp             -----------HHHHHHHHHHHHHHHHH--TTCCEEEEEEESCC-----STT------CCST---THHHHHHHHHHH--H
T ss_pred             -----------chhhHHHHHHHHHHHHH--cCCCEEEEEcccCC-----CCC------CCCc---cchhHHHHHHHH--H
Confidence                       12478899999999999  78999999999432     111      1111   112111222221  1


Q ss_pred             cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCCccCH
Q 020254          183 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRL  261 (328)
Q Consensus       183 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~~~~~  261 (328)
                      ..+++++++||+.++|+..    .++.............++..+++++++|+|++++.++..+.. +++||++ ++.+|+
T Consensus       130 ~~g~~~~ilrp~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~  204 (289)
T 3e48_A          130 TSGIDYTYVRMAMYMDPLK----PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDM  204 (289)
T ss_dssp             HHCCEEEEEEECEESTTHH----HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEH
T ss_pred             HcCCCEEEEeccccccccH----HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCH
Confidence            2589999999999999732    222222111111235568889999999999999999998764 5599999 999999


Q ss_pred             HHHHHHHHHHhCCCC-CCCCcHHHHHHHhcC-c-c-e--------eeecCcccCchHH-HHCCCCcccccHHHHHHHh
Q 020254          262 AEMCDHLGNVLGRPS-WLPVPEFALKAVLGE-G-A-F--------VVLEGQRVVPARA-KELGFPFKYRYVKDALKAI  326 (328)
Q Consensus       262 ~e~~~~i~~~~g~~~-~~~~p~~~~~~~~~~-~-~-~--------~~~~~~~~~~~~~-~~lG~~p~~~~~~~~l~~~  326 (328)
                      .|+++.+.+.+|++. ..++|...+...... . . .        ............. +.+|++|+  ++++.+++-
T Consensus       205 ~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~~~~~~~~~  280 (289)
T 3e48_A          205 KELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ--TLQSFLQEN  280 (289)
T ss_dssp             HHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC--CHHHHHHC-
T ss_pred             HHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC--CHHHHHHHH
Confidence            999999999999873 345555544433222 0 0 0        0111111223344 55899999  899998763

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.98  E-value=2.8e-31  Score=226.30  Aligned_cols=262  Identities=15%  Similarity=0.147  Sum_probs=184.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      +|||||||||||+++++.|+++  |++|++++|++.+...+....  ..+..+|+.|++++.++++++|+|||+|+..  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~--   76 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQG--ITVRQADYGDEAALTSALQGVEKLLLISSSE--   76 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTT--CEEEECCTTCHHHHHHHTTTCSEEEECC-----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCC--CeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC--
Confidence            5999999999999999999998  999999999876543321111  1144579999999999999999999999852  


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhc
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALK  181 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~  181 (328)
                                 ...|+.++.++++++++  .+++++|++||.++  |..            ...| ..|...|.....  
T Consensus        77 -----------~~~~~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~------------~~~y~~sK~~~e~~~~~--  127 (286)
T 2zcu_A           77 -----------VGQRAPQHRNVINAAKA--AGVKFIAYTSLLHA--DTS------------PLGLADEHIETEKMLAD--  127 (286)
T ss_dssp             ----------------CHHHHHHHHHHH--HTCCEEEEEEETTT--TTC------------CSTTHHHHHHHHHHHHH--
T ss_pred             -----------chHHHHHHHHHHHHHHH--cCCCEEEEECCCCC--CCC------------cchhHHHHHHHHHHHHH--
Confidence                       01478899999999998  68899999999887  521            1245 566555554432  


Q ss_pred             ccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC-CCCCCCcccccccHHHHHHHHHHHhhCCC-CCceEEecCCCcc
Q 020254          182 VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV  259 (328)
Q Consensus       182 ~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~i~~~~~~  259 (328)
                        .+++++++||+.++++..    .++..... .+. ....++..++++|++|+|++++.++..+. .+++||+++++.+
T Consensus       128 --~~~~~~ilrp~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          128 --SGIVYTLLRNGWYSENYL----ASAPAALE-HGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAW  200 (286)
T ss_dssp             --HCSEEEEEEECCBHHHHH----TTHHHHHH-HTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCB
T ss_pred             --cCCCeEEEeChHHhhhhH----HHhHHhhc-CCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcC
Confidence              589999999987665421    12211111 121 13456778999999999999999998764 4559999999899


Q ss_pred             CHHHHHHHHHHHhCCCC-CCCCcHHHHHHHh---cCcce-----------eeecCcccCchHHHH-CCCCcccccHHHHH
Q 020254          260 RLAEMCDHLGNVLGRPS-WLPVPEFALKAVL---GEGAF-----------VVLEGQRVVPARAKE-LGFPFKYRYVKDAL  323 (328)
Q Consensus       260 ~~~e~~~~i~~~~g~~~-~~~~p~~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l  323 (328)
                      |+.|+++.+.+.+|.+. ..++|.+......   +....           ........+++++++ |||.|.  +++++|
T Consensus       201 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~--~~~e~l  278 (286)
T 2zcu_A          201 TLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTT--TLAESV  278 (286)
T ss_dssp             CHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCC--CHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCC--CHHHHH
Confidence            99999999999999873 3456665444321   11000           001123445677765 898655  699999


Q ss_pred             HHhhC
Q 020254          324 KAIMS  328 (328)
Q Consensus       324 ~~~l~  328 (328)
                      +++++
T Consensus       279 ~~~~~  283 (286)
T 2zcu_A          279 SHLFN  283 (286)
T ss_dssp             HGGGC
T ss_pred             HHHHh
Confidence            99874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.98  E-value=4.8e-32  Score=246.60  Aligned_cols=256  Identities=20%  Similarity=0.244  Sum_probs=188.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC---CCeEEEEecCCCccccc------CCC-------------CCccccCceeec
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD---NHQVRVLTRSRSKAELI------FPG-------------KKTRFFPGVMIA   78 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~------~~~-------------~~~~~~~~~d~~   78 (328)
                      ..+|+|||||||||||++|+++|+++   |++|++++|++......      ...             .....+..+|+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            45789999999999999999999998   89999999987643110      000             001113356776


Q ss_pred             ------CChhhHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC
Q 020254           79 ------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS  152 (328)
Q Consensus        79 ------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~  152 (328)
                            |.+.+.++++++|+|||+|+....     ..+...++.|+.++.+++++|.+  .++++|||+||.++  |+..
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~~V~iSS~~v--~~~~  221 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALT--TKLKPFTYVSTADV--GAAI  221 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTS--SSCCCEEEEEEGGG--GTTS
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeehhh--cCcc
Confidence                  556788888899999999997533     23346778999999999999999  78899999999998  9876


Q ss_pred             CcccccCCCCCC-------------Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCC--c--chhhhHHHH-H-
Q 020254          153 ETEVFDESSPSG-------------NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG--G--ALAKMIPLF-M-  212 (328)
Q Consensus       153 ~~~~~~e~~~~~-------------~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~--~--~~~~~~~~~-~-  212 (328)
                      ...+++|+.+..             +.| .+|...|.....+....+++++++||++|||++.  +  ....++..+ . 
T Consensus       222 ~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~  301 (478)
T 4dqv_A          222 EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLS  301 (478)
T ss_dssp             CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHH
T ss_pred             CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHH
Confidence            666777776521             237 7788888777776655699999999999999853  1  222233222 1 


Q ss_pred             -HHcCC-CC---C------CCCcccccccHHHHHHHHHHHhhC----CC-CCceEEecCCCc--cCHHHHHHHHHHHhCC
Q 020254          213 -MFAGG-PL---G------SGQQWFSWIHLDDIVNLIYEALSN----PS-YRGVINGTAPNP--VRLAEMCDHLGNVLGR  274 (328)
Q Consensus       213 -~~~~~-~~---~------~~~~~~~~i~v~D~a~~~~~~~~~----~~-~~g~~~i~~~~~--~~~~e~~~~i~~~~g~  274 (328)
                       ...+. |.   .      ..+..++++|++|+|++++.++..    +. .+++||++++++  +++.|+++.+.+. |.
T Consensus       302 ~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~  380 (478)
T 4dqv_A          302 LMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GY  380 (478)
T ss_dssp             HHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TC
T ss_pred             HHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CC
Confidence             11121 11   1      126788999999999999999875    33 456999999987  9999999999996 66


Q ss_pred             CC-CC-CCcHHHHH
Q 020254          275 PS-WL-PVPEFALK  286 (328)
Q Consensus       275 ~~-~~-~~p~~~~~  286 (328)
                      +. .+ ++|.|..+
T Consensus       381 ~~~~i~~~~~w~~~  394 (478)
T 4dqv_A          381 PIRRIDDFAEWLQR  394 (478)
T ss_dssp             SCEEESSHHHHHHH
T ss_pred             CcccCCCHHHHHHH
Confidence            53 23 67777654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=8.5e-32  Score=227.20  Aligned_cols=218  Identities=20%  Similarity=0.241  Sum_probs=167.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      ||+||||||||+||++|+++|+++|++|++++|++.....  ..   ..+..+|+.|++.+.++++++|+|||+|+..  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~---~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--   74 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--AH---EEIVACDLADAQAVHDLVKDCDGIIHLGGVS--   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--TT---EEECCCCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--CC---ccEEEccCCCHHHHHHHHcCCCEEEECCcCC--
Confidence            4689999999999999999999999999999998754211  11   1255689999999999999999999999964  


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC-cccccCCCCCC--Cch-HHHHHHHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPSG--NDY-LAEVCREWEGT  178 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~-~~~~~e~~~~~--~~y-~~k~~~~~~~~  178 (328)
                         ........+++|+.++.++++++.+  .+++++||+||.++  |+... ..+++|+.+..  ..| .+|...|....
T Consensus        75 ---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  147 (267)
T 3ay3_A           75 ---VERPWNDILQANIIGAYNLYEAARN--LGKPRIVFASSNHT--IGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLAS  147 (267)
T ss_dssp             ---SCCCHHHHHHHTHHHHHHHHHHHHH--TTCCEEEEEEEGGG--STTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCHHH--hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence               2234577889999999999999998  68899999999998  88643 45678887754  456 67777777766


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN  257 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~  257 (328)
                      .+....+++++++||+.+|+...                   .+...++++|++|+|++++.++..+.. .++|++.++.
T Consensus       148 ~~~~~~gi~~~~lrp~~v~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~  208 (267)
T 3ay3_A          148 LYYHKFDIETLNIRIGSCFPKPK-------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN  208 (267)
T ss_dssp             HHHHTTCCCEEEEEECBCSSSCC-------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC
T ss_pred             HHHHHcCCCEEEEeceeecCCCC-------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc
Confidence            65556799999999999984321                   112346789999999999999998764 3588887765


Q ss_pred             ccCHHHHHHHHHHHhCCC
Q 020254          258 PVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       258 ~~~~~e~~~~i~~~~g~~  275 (328)
                      ..++.|+.+.  +.+|.+
T Consensus       209 ~~~~~d~~~~--~~lg~~  224 (267)
T 3ay3_A          209 TESWWDNDKS--AFLGWV  224 (267)
T ss_dssp             SSCCBCCGGG--GGGCCC
T ss_pred             cccccCHHHH--HHcCCC
Confidence            5555444444  444443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=3.4e-31  Score=231.20  Aligned_cols=233  Identities=15%  Similarity=0.196  Sum_probs=178.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC-CC-eEEEEecCCCcccccCCC--CCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      .++|+||||||||+||++++++|+++ |+ +|++++|++.+...+...  .....+..+|+.|.+.+.++++++|+|||+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            34589999999999999999999999 97 999999986543322100  001114457999999999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  175 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  175 (328)
                      ||... .......+...+++|+.++.++++++.+  .+++++|++||...  +.            +.+.| .+|...|.
T Consensus        99 Aa~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~--~~v~~~V~~SS~~~--~~------------p~~~Y~~sK~~~E~  161 (344)
T 2gn4_A           99 AALKH-VPIAEYNPLECIKTNIMGASNVINACLK--NAISQVIALSTDKA--AN------------PINLYGATKLCSDK  161 (344)
T ss_dssp             CCCCC-HHHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCGGG--SS------------CCSHHHHHHHHHHH
T ss_pred             CCCCC-CCchhcCHHHHHHHHHHHHHHHHHHHHh--CCCCEEEEecCCcc--CC------------CccHHHHHHHHHHH
Confidence            99742 2223345678899999999999999999  68899999999876  32            23567 77887777


Q ss_pred             HHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC-C--CCCCCcccccccHHHHHHHHHHHhhCCCCCc
Q 020254          176 EGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-P--LGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  249 (328)
Q Consensus       176 ~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  249 (328)
                      ....+...   .+++++++|||+|||+.+.....+..  ....+. +  +.++...++++|++|+|++++.++..+..++
T Consensus       162 ~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~--~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~  239 (344)
T 2gn4_A          162 LFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKK--LVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGE  239 (344)
T ss_dssp             HHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHH--HHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSC
T ss_pred             HHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHH--HHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCC
Confidence            77666543   57999999999999997643332222  223444 3  3567778899999999999999998765455


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhC
Q 020254          250 VINGTAPNPVRLAEMCDHLGNVLG  273 (328)
Q Consensus       250 ~~~i~~~~~~~~~e~~~~i~~~~g  273 (328)
                      +|++.++ .+++.|+++.+.+.++
T Consensus       240 ~~~~~~~-~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          240 IFVPKIP-SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EEEECCC-EEEHHHHHHHHCTTCC
T ss_pred             EEecCCC-cEEHHHHHHHHHHhCC
Confidence            9998776 5999999999987664

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=1e-31  Score=237.23  Aligned_cols=209  Identities=21%  Similarity=0.245  Sum_probs=172.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      |+|||||||||||++|+++|+++|+ +|++++|+                     .|++++.++++++|+|||+|+....
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------~d~~~l~~~~~~~d~Vih~a~~~~~   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------TKEEELESALLKADFIVHLAGVNRP   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------CCHHHHHHHHHHCSEEEECCCSBCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------CCHHHHHHHhccCCEEEECCcCCCC
Confidence            6899999999999999999999998 99887775                     4677888888899999999996432


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-cEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHh
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  180 (328)
                           ..+...++.|+.++.++++++++  .+++ ++||+||.++  |+             .+.| .+|...|.....+
T Consensus        60 -----~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~Ss~~~--~~-------------~~~Y~~sK~~~E~~~~~~  117 (369)
T 3st7_A           60 -----EHDKEFSLGNVSYLDHVLDILTR--NTKKPAILLSSSIQA--TQ-------------DNPYGESKLQGEQLLREY  117 (369)
T ss_dssp             -----TCSTTCSSSCCBHHHHHHHHHTT--CSSCCEEEEEEEGGG--GS-------------CSHHHHHHHHHHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCchhh--cC-------------CCCchHHHHHHHHHHHHH
Confidence                 23455678899999999999998  6776 8999999998  66             3457 7788778777776


Q ss_pred             cccCCCeEEEEEeceEEcCCCcc-hhhhHHHH--HHHcCCCC--CCCCcccccccHHHHHHHHHHHhhCCCC--CceEEe
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSY--RGVING  253 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~g~~~i  253 (328)
                      ..+.+++++++||+++||++... ...++..+  ....+.++  .+++..++++|++|+|++++.++..+..  +++||+
T Consensus       118 ~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i  197 (369)
T 3st7_A          118 AEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV  197 (369)
T ss_dssp             HHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECC
T ss_pred             HHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEe
Confidence            66678999999999999997532 22344333  33344443  6678899999999999999999998875  679999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCC
Q 020254          254 TAPNPVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       254 ~~~~~~~~~e~~~~i~~~~g~~  275 (328)
                      ++++.+|+.|+++.+.+.+|.+
T Consensus       198 ~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          198 PNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             SCCEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCceeHHHHHHHHHHHhCCC
Confidence            9999999999999999999865

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=1.6e-30  Score=212.85  Aligned_cols=205  Identities=15%  Similarity=0.179  Sum_probs=157.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecC-ChhhHhhcCCCcEEEECCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      |+||||||||+||++++++|+++|++|++++|++.+.... ..   ..+..+|+.| ++++.++++++|+|||+|+....
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~---~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~   76 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NN---VKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK   76 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TT---EEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CC---ceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence            5899999999999999999999999999999998765433 11   1255679999 99999999999999999997421


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC--CCCch-HHHHHHHHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCREWEGTA  179 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~--~~~~y-~~k~~~~~~~~~  179 (328)
                               ..+++|+.++.++++++++  .+++++|++||.++  ++..   +..| .+  +...| .+|...|.... 
T Consensus        77 ---------~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~-  138 (219)
T 3dqp_A           77 ---------SLLKVDLYGAVKLMQAAEK--AEVKRFILLSTIFS--LQPE---KWIG-AGFDALKDYYIAKHFADLYLT-  138 (219)
T ss_dssp             ---------SCCCCCCHHHHHHHHHHHH--TTCCEEEEECCTTT--TCGG---GCCS-HHHHHTHHHHHHHHHHHHHHH-
T ss_pred             ---------CcEeEeHHHHHHHHHHHHH--hCCCEEEEECcccc--cCCC---cccc-cccccccHHHHHHHHHHHHHH-
Confidence                     2567899999999999999  78899999999876  5422   3333 22  12345 55555444443 


Q ss_pred             hcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCCc
Q 020254          180 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNP  258 (328)
Q Consensus       180 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~~  258 (328)
                        ...+++++++||+.+||+.......              .++..+++++++|+|++++.++.++.. +++||++++. 
T Consensus       139 --~~~~i~~~ilrp~~v~g~~~~~~~~--------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-  201 (219)
T 3dqp_A          139 --KETNLDYTIIQPGALTEEEATGLID--------------INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-  201 (219)
T ss_dssp             --HSCCCEEEEEEECSEECSCCCSEEE--------------ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-
T ss_pred             --hccCCcEEEEeCceEecCCCCCccc--------------cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-
Confidence              3469999999999999986422111              125668899999999999999998764 4599998886 


Q ss_pred             cCHHHHHHH
Q 020254          259 VRLAEMCDH  267 (328)
Q Consensus       259 ~~~~e~~~~  267 (328)
                      .+++|+...
T Consensus       202 ~~~~e~~~~  210 (219)
T 3dqp_A          202 TAIKEALES  210 (219)
T ss_dssp             EEHHHHHHT
T ss_pred             ccHHHHHHH
Confidence            888887753

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=6.1e-30  Score=215.66  Aligned_cols=218  Identities=20%  Similarity=0.224  Sum_probs=174.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      ||+||||||+|+||+++++.|+++|++|++++|++.+....     ......+|+.|.+++.++++++|+|||+||..  
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--   75 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP-----NEECVQCDLADANAVNAMVAGCDGIVHLGGIS--   75 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCT-----TEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCC-----CCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--
Confidence            46899999999999999999999999999999987654311     11245689999999999999999999999973  


Q ss_pred             CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCC-CcccccCCCCCC--Cch-HHHHHHHHHHH
Q 020254          103 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDESSPSG--NDY-LAEVCREWEGT  178 (328)
Q Consensus       103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~-~~~~~~e~~~~~--~~y-~~k~~~~~~~~  178 (328)
                         ....++..+++|+.++.++++++++  .+.+++|++||..+  ||.. ...+++|+.+..  ..| .+|...|....
T Consensus        76 ---~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~--~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  148 (267)
T 3rft_A           76 ---VEKPFEQILQGNIIGLYNLYEAARA--HGQPRIVFASSNHT--IGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR  148 (267)
T ss_dssp             ---SCCCHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---CcCCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcchHH--hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence               2345678899999999999999998  68899999999988  8743 344667776643  457 77887777776


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCC-ceEEecCCC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVINGTAPN  257 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-g~~~i~~~~  257 (328)
                      .+..+.+++++++||+.|+|+..                   +.....++++++|+++++..+++.+... .++++.+++
T Consensus       149 ~~a~~~g~~~~~vr~~~v~~~~~-------------------~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          149 MYFDKFGQETALVRIGSCTPEPN-------------------NYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN  209 (267)
T ss_dssp             HHHHHHCCCEEEEEECBCSSSCC-------------------STTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC
T ss_pred             HHHHHhCCeEEEEEeecccCCCC-------------------CCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC
Confidence            66666799999999999998732                   2344567899999999999999987754 488888888


Q ss_pred             ccCHHHHHHHHHHHhCCC
Q 020254          258 PVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       258 ~~~~~e~~~~i~~~~g~~  275 (328)
                      +.++.++...  +.+|.+
T Consensus       210 ~~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          210 DAGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             TTCCBCCGGG--GGGCCC
T ss_pred             CCCcccChhH--HHCCCC
Confidence            7887776433  667765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=1.2e-29  Score=207.92  Aligned_cols=216  Identities=14%  Similarity=0.131  Sum_probs=139.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      ||||||||||+||++++++|+++|++|++++|++.+...+....   .+..+|+.|.+.  +.+.++|+|||+|+.... 
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI---NILQKDIFDLTL--SDLSDQNVVVDAYGISPD-   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSS---EEEECCGGGCCH--HHHTTCSEEEECCCSSTT-
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCC---eEEeccccChhh--hhhcCCCEEEECCcCCcc-
Confidence            68999999999999999999999999999999987655443211   255679988887  788899999999997311 


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHHHHHHHHh
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~  180 (328)
                               ....|+.+++++++++++  .+++++|++||.+.. |+.....+..|+.+.  ...| ..|...+.+....
T Consensus        75 ---------~~~~~~~~~~~l~~a~~~--~~~~~~v~~SS~~~~-~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  142 (221)
T 3ew7_A           75 ---------EAEKHVTSLDHLISVLNG--TVSPRLLVVGGAASL-QIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK  142 (221)
T ss_dssp             ---------TTTSHHHHHHHHHHHHCS--CCSSEEEEECCCC--------------------CCCSCCHHHHHHHHHHHH
T ss_pred             ---------ccchHHHHHHHHHHHHHh--cCCceEEEEecceEE-EcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence                     135689999999999999  678999999998752 554433344454443  3446 6777776664444


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCCcc
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPV  259 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~~~  259 (328)
                      ....+++++++||+.+||++... ..+    .. .+.++.......++++++|+|++++.+++++.. +..||++++.+.
T Consensus       143 ~~~~gi~~~ivrp~~v~g~~~~~-~~~----~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          143 SHQAEFSWTYISPSAMFEPGERT-GDY----QI-GKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEH  216 (221)
T ss_dssp             TTTTTSCEEEEECSSCCCCC---------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC----
T ss_pred             hhccCccEEEEeCcceecCCCcc-Cce----Ee-ccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcc
Confidence            32579999999999999984311 111    11 111111111123689999999999999999874 459999998877


Q ss_pred             CHHH
Q 020254          260 RLAE  263 (328)
Q Consensus       260 ~~~e  263 (328)
                      +..|
T Consensus       217 ~~~~  220 (221)
T 3ew7_A          217 HHHH  220 (221)
T ss_dssp             ----
T ss_pred             cccc
Confidence            6654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=6.2e-30  Score=211.82  Aligned_cols=215  Identities=15%  Similarity=0.165  Sum_probs=159.5

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCceeecCChhhHhhcCCCcEEEECC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ...+.|+||||||||+||++++++|+++|++|++++|++.+...+....  . ....+|+.  +.+.+++.++|+|||+|
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~Dl~--~~~~~~~~~~D~vi~~a   92 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERG--ASDIVVANLE--EDFSHAFASIDAVVFAA   92 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTT--CSEEEECCTT--SCCGGGGTTCSEEEECC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCC--CceEEEcccH--HHHHHHHcCCCEEEECC
Confidence            3445789999999999999999999999999999999987654432210  0 14456777  78888999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC-CCCCch-HHHHHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-PSGNDY-LAEVCREW  175 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~-~~~~~y-~~k~~~~~  175 (328)
                      |...     ...+...+++|+.++.++++++++  .+++++|++||.+.  +..       +.. ++...| .+|...|.
T Consensus        93 g~~~-----~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~-------~~~~~~~~~Y~~sK~~~e~  156 (236)
T 3e8x_A           93 GSGP-----HTGADKTILIDLWGAIKTIQEAEK--RGIKRFIMVSSVGT--VDP-------DQGPMNMRHYLVAKRLADD  156 (236)
T ss_dssp             CCCT-----TSCHHHHHHTTTHHHHHHHHHHHH--HTCCEEEEECCTTC--SCG-------GGSCGGGHHHHHHHHHHHH
T ss_pred             CCCC-----CCCccccchhhHHHHHHHHHHHHH--cCCCEEEEEecCCC--CCC-------CCChhhhhhHHHHHHHHHH
Confidence            9642     245778899999999999999998  68899999999654  321       111 233445 55655544


Q ss_pred             HHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC-CCceEEec
Q 020254          176 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGT  254 (328)
Q Consensus       176 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~~i~  254 (328)
                      ...    ..+++++++||+.++|+........           .......+++++++|+|++++.++..+. .+++|+++
T Consensus       157 ~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-----------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~  221 (236)
T 3e8x_A          157 ELK----RSSLDYTIVRPGPLSNEESTGKVTV-----------SPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVL  221 (236)
T ss_dssp             HHH----HSSSEEEEEEECSEECSCCCSEEEE-----------ESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEE
T ss_pred             HHH----HCCCCEEEEeCCcccCCCCCCeEEe-----------ccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEe
Confidence            433    4699999999999999864221110           0123446889999999999999999875 44599998


Q ss_pred             CCCccCHHHHHHHHH
Q 020254          255 APNPVRLAEMCDHLG  269 (328)
Q Consensus       255 ~~~~~~~~e~~~~i~  269 (328)
                      ++. +++.|+++.++
T Consensus       222 ~~~-~~~~e~~~~i~  235 (236)
T 3e8x_A          222 NGD-TPIAKVVEQLG  235 (236)
T ss_dssp             ECS-EEHHHHHHTC-
T ss_pred             CCC-cCHHHHHHHhc
Confidence            884 99999998765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.96  E-value=7.2e-29  Score=203.76  Aligned_cols=215  Identities=18%  Similarity=0.118  Sum_probs=152.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      ||||||||||+||++++++|+++|++|++++|++.+...+....  ..+..+|+.|++.  +.+.++|+|||+|+.... 
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGAT--VATLVKEPLVLTE--ADLDSVDAVVDALSVPWG-   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTT--SEEEECCGGGCCH--HHHTTCSEEEECCCCCTT-
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCC--ceEEecccccccH--hhcccCCEEEECCccCCC-
Confidence            68999999999999999999999999999999987655433211  1244679988888  788899999999997411 


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc--ccccCCCCC--CCch-HHHHHHHHHHH
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDESSPS--GNDY-LAEVCREWEGT  178 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~--~~~~e~~~~--~~~y-~~k~~~~~~~~  178 (328)
                         .    .....|+.+++++++++++  .+ +++|++||.+.. |+....  .+.++...+  ...| .+|...|... 
T Consensus        76 ---~----~~~~~n~~~~~~l~~a~~~--~~-~~~v~~SS~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-  143 (224)
T 3h2s_A           76 ---S----GRGYLHLDFATHLVSLLRN--SD-TLAVFILGSASL-AMPGADHPMILDFPESAASQPWYDGALYQYYEYQ-  143 (224)
T ss_dssp             ---S----SCTHHHHHHHHHHHHTCTT--CC-CEEEEECCGGGS-BCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHH-
T ss_pred             ---c----chhhHHHHHHHHHHHHHHH--cC-CcEEEEecceee-ccCCCCccccccCCCCCccchhhHHHHHHHHHHH-
Confidence               1    1135799999999999999  66 899999998652 333222  244444444  4456 6666666432 


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN  257 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~  257 (328)
                      .+....+++++++||+.+||++....  +.     .....+.......++++++|+|++++.+++++.. +++|++++.+
T Consensus       144 ~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-----~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~  216 (224)
T 3h2s_A          144 FLQMNANVNWIGISPSEAFPSGPATS--YV-----AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD  216 (224)
T ss_dssp             HHTTCTTSCEEEEEECSBCCCCCCCC--EE-----EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC
T ss_pred             HHHhcCCCcEEEEcCccccCCCcccC--ce-----ecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc
Confidence            33345699999999999999853211  11     1122223344557899999999999999999874 4599999876


Q ss_pred             ccCHH
Q 020254          258 PVRLA  262 (328)
Q Consensus       258 ~~~~~  262 (328)
                      ..++.
T Consensus       217 ~~~~~  221 (224)
T 3h2s_A          217 LEHHH  221 (224)
T ss_dssp             -----
T ss_pred             chhcc
Confidence            55543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=2.4e-30  Score=221.97  Aligned_cols=271  Identities=14%  Similarity=0.025  Sum_probs=185.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCccc--ccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|+|+||||||+||++++++|+++| ++|++++|++.+..  .+....  .....+|+.|++++.++++++|+|||+++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG--AEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCC--CEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            35799999999999999999999998 99999999876531  111110  01445799999999999999999999987


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG  177 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~  177 (328)
                      ..         .....+.|+.++.++++++++  .+++++|++|+.++  |+...      ..+ ...| .+|...|...
T Consensus        82 ~~---------~~~~~~~~~~~~~~~~~aa~~--~gv~~iv~~S~~~~--~~~~~------~~~-~~~y~~sK~~~e~~~  141 (299)
T 2wm3_A           82 YW---------ESCSQEQEVKQGKLLADLARR--LGLHYVVYSGLENI--KKLTA------GRL-AAAHFDGKGEVEEYF  141 (299)
T ss_dssp             HH---------HHTCHHHHHHHHHHHHHHHHH--HTCSEEEECCCCCH--HHHTT------TSC-CCHHHHHHHHHHHHH
T ss_pred             CC---------ccccchHHHHHHHHHHHHHHH--cCCCEEEEEcCccc--cccCC------Ccc-cCchhhHHHHHHHHH
Confidence            41         001134678899999999998  68899999887776  65221      112 2345 5565555443


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC----CCCCCCcccccccHHHHHHHHHHHhhCCC--CCceE
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVI  251 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~  251 (328)
                      ..    .+++++++||+.+||+....   +.+.. ...+.    .+..++..+++++++|+|++++.++..+.  .+.+|
T Consensus       142 ~~----~gi~~~ilrp~~~~~~~~~~---~~~~~-~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~  213 (299)
T 2wm3_A          142 RD----IGVPMTSVRLPCYFENLLSH---FLPQK-APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNI  213 (299)
T ss_dssp             HH----HTCCEEEEECCEEGGGGGTT---TCCEE-CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEE
T ss_pred             HH----CCCCEEEEeecHHhhhchhh---cCCcc-cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEE
Confidence            32    48999999999999974211   11100 01121    12346778899999999999999998753  35599


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcC--------cceeeecCcccCchHHHHCCCCcccccHHHH
Q 020254          252 NGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGE--------GAFVVLEGQRVVPARAKELGFPFKYRYVKDA  322 (328)
Q Consensus       252 ~i~~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~  322 (328)
                      ++++ +.+|+.|+++.+.+.+|++ ...++|.+.+... +.        +..........+....+.+|.+|+  +|++.
T Consensus       214 ~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~  289 (299)
T 2wm3_A          214 GLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKL-GFPGARDLANMFRFYALRPDRDIELTLRLNPKAL--TLDQW  289 (299)
T ss_dssp             ECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTT-CSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCC--CHHHH
T ss_pred             Eeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhc-CCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCC--CHHHH
Confidence            9986 5799999999999999987 3345565544321 11        011111111112222356899888  79999


Q ss_pred             HHHh
Q 020254          323 LKAI  326 (328)
Q Consensus       323 l~~~  326 (328)
                      +++.
T Consensus       290 ~~~~  293 (299)
T 2wm3_A          290 LEQH  293 (299)
T ss_dssp             HHHH
T ss_pred             HHhC
Confidence            9875

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.96  E-value=5.6e-29  Score=217.80  Aligned_cols=226  Identities=15%  Similarity=0.140  Sum_probs=163.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-------C-CCCCccccCceeecCChhhHhhcC--CCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------F-PGKKTRFFPGVMIAEEPQWRDCIQ--GSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~~~~d~~~~~~~~~~~~--~~d~   92 (328)
                      +|+||||||||+||++|++.|++.|++|++++|++......       . ...   .+..+|+.|.+++.++++  ++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v---~~~~~Dl~d~~~l~~~~~~~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA---IIVYGLINEQEAMEKILKEHEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTC---EEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCc---EEEEeecCCHHHHHHHHhhCCCCE
Confidence            57999999999999999999999999999999987322110       0 111   144679999999999999  9999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCCC--ch-H
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-L  168 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~--~y-~  168 (328)
                      |||+++.                .|+.++.+++++|++  .+ ++++|+ |   +  ||..    .+|..+..+  .| .
T Consensus        87 Vi~~a~~----------------~n~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~----~~e~~~~~p~~~y~~  138 (346)
T 3i6i_A           87 VVSTVGG----------------ESILDQIALVKAMKA--VGTIKRFLP-S---E--FGHD----VNRADPVEPGLNMYR  138 (346)
T ss_dssp             EEECCCG----------------GGGGGHHHHHHHHHH--HCCCSEEEC-S---C--CSSC----TTTCCCCTTHHHHHH
T ss_pred             EEECCch----------------hhHHHHHHHHHHHHH--cCCceEEee-c---c--cCCC----CCccCcCCCcchHHH
Confidence            9999985                388999999999998  66 888775 3   2  6532    344444322  34 4


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      .|...+....    ..+++++++||+.++|.........  ......+..   .++++..+++++++|+|++++.++..+
T Consensus       139 sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~~~--~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          139 EKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNIHP--SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             HHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHH----HcCCCEEEEEecccccccCcccccc--ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence            4444433332    2689999999999999753221111  001112222   267788999999999999999999987


Q ss_pred             CC-CceEEecC-CCccCHHHHHHHHHHHhCCCCC-CCCcHHHH
Q 020254          246 SY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFAL  285 (328)
Q Consensus       246 ~~-~g~~~i~~-~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~  285 (328)
                      .. +++|++.+ ++.+|+.|+++.+.+.+|++.. ..+|....
T Consensus       213 ~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  255 (346)
T 3i6i_A          213 RTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDL  255 (346)
T ss_dssp             GGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHH
T ss_pred             cccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHH
Confidence            63 56899985 5889999999999999998732 34555443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.96  E-value=4.5e-29  Score=208.74  Aligned_cols=231  Identities=18%  Similarity=0.117  Sum_probs=163.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++|+|+||||+|+||++++++|+++  |++|++++|++.+...+....   .+..+|+.|.+++.++++++|+|||+|+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA---DVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCT---TEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCe---eEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4689999999999999999999999  899999999875544331111   14567999999999999999999999986


Q ss_pred             CCCCCC---------C---hhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254          100 PIGTRW---------S---SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus       100 ~~~~~~---------~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ......         .   .+.....+++|+.++.++++++++  .+++++|++||.++  +....  +....  ....|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~~~~~--~~~~~--~~~~y  151 (253)
T 1xq6_A           80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG--TNPDH--PLNKL--GNGNI  151 (253)
T ss_dssp             CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT--TCTTC--GGGGG--GGCCH
T ss_pred             cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH--cCCCEEEEEcCccC--CCCCC--ccccc--cchhH
Confidence            421100         0   011224678999999999999998  67889999999876  43211  11000  01224


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                       ..|...|....    ..+++++++||+.++|+.......+..     ...++.  .....+++++|+|++++.++..+.
T Consensus       152 ~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~Dva~~~~~~~~~~~  220 (253)
T 1xq6_A          152 LVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVG-----KDDELL--QTDTKTVPRADVAEVCIQALLFEE  220 (253)
T ss_dssp             HHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSSCEEEE-----STTGGG--GSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHHHH----hCCCceEEEecceeecCCcchhhhhcc-----CCcCCc--CCCCcEEcHHHHHHHHHHHHcCcc
Confidence             35554444332    268999999999999986432111000     011111  113468999999999999998865


Q ss_pred             C-CceEEecCCC---ccCHHHHHHHHHHHhCC
Q 020254          247 Y-RGVINGTAPN---PVRLAEMCDHLGNVLGR  274 (328)
Q Consensus       247 ~-~g~~~i~~~~---~~~~~e~~~~i~~~~g~  274 (328)
                      . +++||+++++   ++++.|+++.+.+.+|+
T Consensus       221 ~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          221 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            4 4599999864   59999999999999886

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-28  Score=200.56  Aligned_cols=205  Identities=18%  Similarity=0.144  Sum_probs=151.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++|+|+||||||+||++++++|+++|+  +|++++|++.+..   ..   .....+|+.|++++.+++  +|+|||+|+.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~---~~---~~~~~~D~~~~~~~~~~~--~d~vi~~a~~   75 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---PR---LDNPVGPLAELLPQLDGS--IDTAFCCLGT   75 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---TT---EECCBSCHHHHGGGCCSC--CSEEEECCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccC---CC---ceEEeccccCHHHHHHhh--hcEEEECeee
Confidence            457999999999999999999999998  9999999876511   11   114457888888888888  9999999986


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  178 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  178 (328)
                      ...   ....++..+++|+.++.++++++++  .+++++|++||.++  |+.           +...| ..|...|....
T Consensus        76 ~~~---~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--~~~-----------~~~~y~~sK~~~e~~~~  137 (215)
T 2a35_A           76 TIK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA--DAK-----------SSIFYNRVKGELEQALQ  137 (215)
T ss_dssp             CHH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHHHHHHHHHHT
T ss_pred             ccc---cCCCHHHHHHhhHHHHHHHHHHHHH--cCCCEEEEECCccc--CCC-----------CccHHHHHHHHHHHHHH
Confidence            411   1345678889999999999999999  68889999999987  653           12345 55544444332


Q ss_pred             HhcccCCCe-EEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCC
Q 020254          179 ALKVNKDVR-LALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPN  257 (328)
Q Consensus       179 ~~~~~~~~~-~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~  257 (328)
                          ..+++ ++++||+.+||+....  .+...+. ....++..  ..++++|++|+|++++.++.++. +++||+++++
T Consensus       138 ----~~~~~~~~~vrp~~v~g~~~~~--~~~~~~~-~~~~~~~~--~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~  207 (215)
T 2a35_A          138 ----EQGWPQLTIARPSLLFGPREEF--RLAEILA-APIARILP--GKYHGIEACDLARALWRLALEEG-KGVRFVESDE  207 (215)
T ss_dssp             ----TSCCSEEEEEECCSEESTTSCE--EGGGGTT-CCCC------CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHH
T ss_pred             ----HcCCCeEEEEeCceeeCCCCcc--hHHHHHH-HhhhhccC--CCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHH
Confidence                24888 9999999999997541  1111111 01112222  36789999999999999999876 7799999887


Q ss_pred             ccCHH
Q 020254          258 PVRLA  262 (328)
Q Consensus       258 ~~~~~  262 (328)
                      ++++.
T Consensus       208 ~~~~~  212 (215)
T 2a35_A          208 LRKLG  212 (215)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            65543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=2.5e-28  Score=210.72  Aligned_cols=232  Identities=16%  Similarity=0.228  Sum_probs=160.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cc---cCCCCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----EL---IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      +|+|+||||||+||+++++.|+++|++|++++|++...     ..   +....  .....+|+.|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG--AKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTT--CEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCC--eEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999986431     00   10111  1145679999999999999999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCR  173 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~  173 (328)
                      |+++....            ..|+.++.+++++|++  .+ ++++|+ |   +  ||.....+.....|..+.|.+|...
T Consensus        82 ~~a~~~~~------------~~~~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~~~~~~~~~p~~~~y~sK~~~  141 (313)
T 1qyd_A           82 SALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLP-S---E--FGMDPDIMEHALQPGSITFIDKRKV  141 (313)
T ss_dssp             ECCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEEC-S---C--CSSCTTSCCCCCSSTTHHHHHHHHH
T ss_pred             ECCccccc------------hhhHHHHHHHHHHHHh--cCCCceEEe-c---C--CcCCccccccCCCCCcchHHHHHHH
Confidence            99986421            1378889999999999  66 888875 3   3  6633222101111223345455444


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCCC-CCc
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-YRG  249 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g  249 (328)
                      |....    ..+++++++||+.++|+....+..... .....+..   .++++..+++++++|+|++++.++..+. .++
T Consensus       142 e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~  216 (313)
T 1qyd_A          142 RRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDG-HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK  216 (313)
T ss_dssp             HHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTC-CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSS
T ss_pred             HHHHH----hcCCCeEEEEeceeccccccccccccc-cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCc
Confidence            43332    358999999999998853211111000 00011111   2566788999999999999999998865 345


Q ss_pred             eEEecCC-CccCHHHHHHHHHHHhCCCC-CCCCc
Q 020254          250 VINGTAP-NPVRLAEMCDHLGNVLGRPS-WLPVP  281 (328)
Q Consensus       250 ~~~i~~~-~~~~~~e~~~~i~~~~g~~~-~~~~p  281 (328)
                      .|++.++ +.+|+.|+++.+.+.+|++. ...+|
T Consensus       217 ~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  250 (313)
T 1qyd_A          217 TMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS  250 (313)
T ss_dssp             EEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred             eEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence            7888764 78999999999999999873 33455

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=5.2e-26  Score=184.16  Aligned_cols=200  Identities=15%  Similarity=0.104  Sum_probs=143.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  103 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  103 (328)
                      |+|+||||||+||++++++|+++|++|++++|++.+.......  ......+|+.|++++.++++++|+|||+++.....
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   81 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR--PAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC--CSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCC--ceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence            7999999999999999999999999999999987654432111  11244579999999999999999999999964321


Q ss_pred             CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhcc
Q 020254          104 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV  182 (328)
Q Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~  182 (328)
                      .        ..+.|+.++.++++++++  .+++++|++||.++  |+.....+.     +...| ..|...|...    .
T Consensus        82 ~--------~~~~n~~~~~~~~~~~~~--~~~~~~v~~Ss~~~--~~~~~~~~~-----~~~~y~~~K~~~e~~~----~  140 (206)
T 1hdo_A           82 S--------PTTVMSEGARNIVAAMKA--HGVDKVVACTSAFL--LWDPTKVPP-----RLQAVTDDHIRMHKVL----R  140 (206)
T ss_dssp             S--------CCCHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSCTTCSCG-----GGHHHHHHHHHHHHHH----H
T ss_pred             C--------ccchHHHHHHHHHHHHHH--hCCCeEEEEeeeee--ccCcccccc-----cchhHHHHHHHHHHHH----H
Confidence            1        124789999999999998  68889999999988  775432111     22334 4454444433    2


Q ss_pred             cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC-CceEEecCCC
Q 020254          183 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN  257 (328)
Q Consensus       183 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~~i~~~~  257 (328)
                      ..+++++++||+.+ +++... ..+..   ...+.    +.  .++++++|+|++++.+++++.. +++|+++++.
T Consensus       141 ~~~i~~~~lrp~~~-~~~~~~-~~~~~---~~~~~----~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          141 ESGLKYVAVMPPHI-GDQPLT-GAYTV---TLDGR----GP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             HTCSEEEEECCSEE-ECCCCC-SCCEE---ESSSC----SS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             hCCCCEEEEeCCcc-cCCCCC-cceEe---cccCC----CC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            36899999999998 333211 01100   00111    10  4799999999999999998764 4599999874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=9.2e-26  Score=187.41  Aligned_cols=205  Identities=15%  Similarity=0.093  Sum_probs=149.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++.+.......  ......+|+.|++++.++++++|+|||+||.
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK--NVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG--GCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC--CceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            457999999999999999999999999  999999987654322111  1114457999999999999999999999986


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  178 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  178 (328)
                      ..    ....++..+++|+.++.++++++++  .+.+++|++||.++  |+.           +...| .+|...+....
T Consensus        95 ~~----~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~iv~~SS~~~--~~~-----------~~~~Y~~sK~~~e~~~~  155 (242)
T 2bka_A           95 TR----GKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA--DKS-----------SNFLYLQVKGEVEAKVE  155 (242)
T ss_dssp             CH----HHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHHHHHHHHHHH
T ss_pred             cc----ccCCcccceeeeHHHHHHHHHHHHH--CCCCEEEEEccCcC--CCC-----------CcchHHHHHHHHHHHHH
Confidence            31    1234577889999999999999998  67889999999887  652           12346 55655444443


Q ss_pred             HhcccCCC-eEEEEEeceEEcCCCcchhhhHHHH-H-HHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecC
Q 020254          179 ALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  255 (328)
Q Consensus       179 ~~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~  255 (328)
                      .    .++ +++++||+.++|+....  .....+ . .....+..  .....+++++|+|++++.++.++...+.|++.+
T Consensus       156 ~----~~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          156 E----LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDS--WASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             T----TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTT--GGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             h----cCCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCcc--ccCCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence            2    467 69999999999996422  111111 1 11122211  112358999999999999999877667777654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.94  E-value=1.1e-26  Score=203.04  Aligned_cols=221  Identities=15%  Similarity=0.146  Sum_probs=158.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCcee-ecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +|+|+||||||+||++|++.|+++|++|++++|++.+.  ..+..... .....+| +.|++++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~-v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPN-VTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTT-EEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCC-cEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            57899999999999999999999999999999987653  11111100 1134579 88999999999999999999874


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG  177 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~  177 (328)
                      ..            .+.|..+ +++++++++  .+ ++++||+||.+...|+.          ++...| .+|...|...
T Consensus        84 ~~------------~~~~~~~-~~l~~aa~~--~g~v~~~V~~SS~~~~~~~~----------~~~~~y~~sK~~~E~~~  138 (352)
T 1xgk_A           84 QA------------GDEIAIG-KDLADAAKR--AGTIQHYIYSSMPDHSLYGP----------WPAVPMWAPKFTVENYV  138 (352)
T ss_dssp             TT------------SCHHHHH-HHHHHHHHH--HSCCSEEEEEECCCGGGTSS----------CCCCTTTHHHHHHHHHH
T ss_pred             CC------------cHHHHHH-HHHHHHHHH--cCCccEEEEeCCccccccCC----------CCCccHHHHHHHHHHHH
Confidence            21            0235655 899999998  67 89999999976322432          122334 6665555544


Q ss_pred             HHhcccCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCC----CCCCCcccccccH-HHHHHHHHHHhhCCC---CC
Q 020254          178 TALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGP----LGSGQQWFSWIHL-DDIVNLIYEALSNPS---YR  248 (328)
Q Consensus       178 ~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~~~~~~~~~~~---~~  248 (328)
                      ..    .+++++++||+ +||++.... ..++.......+..    ++.+++.++++|+ +|+|++++.++.++.   .+
T Consensus       139 ~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g  213 (352)
T 1xgk_A          139 RQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG  213 (352)
T ss_dssp             HT----SSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred             HH----cCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCC
Confidence            32    48999999987 688764211 01110000012221    2456788999999 899999999998752   35


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCC
Q 020254          249 GVINGTAPNPVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       249 g~~~i~~~~~~~~~e~~~~i~~~~g~~  275 (328)
                      ++||+++ +.+|+.|+++.+.+.+|++
T Consensus       214 ~~~~l~~-~~~s~~e~~~~i~~~~G~~  239 (352)
T 1xgk_A          214 HRIALTF-ETLSPVQVCAAFSRALNRR  239 (352)
T ss_dssp             CEEEECS-EEECHHHHHHHHHHHHTSC
T ss_pred             eEEEEec-CCCCHHHHHHHHHHHHCCC
Confidence            6999996 5699999999999999986

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=1.6e-25  Score=185.15  Aligned_cols=202  Identities=13%  Similarity=0.128  Sum_probs=136.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++||+||||||+|+||+++++.|+++| ++|++++|++.+........  .....+|+.|++++.++++++|+|||+++.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~   98 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN--SQIIMGDVLNHAALKQAMQGQDIVYANLTG   98 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT--EEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC--cEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence            346789999999999999999999999 99999999987655433221  124467999999999999999999999985


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC-CCchHHHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGT  178 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~-~~~y~~k~~~~~~~~  178 (328)
                      .      .         ....++++++++++  .++++||++||.++  |+..+.......... ...+..+...+... 
T Consensus        99 ~------~---------~~~~~~~~~~~~~~--~~~~~iV~iSS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-  158 (236)
T 3qvo_A           99 E------D---------LDIQANSVIAAMKA--CDVKRLIFVLSLGI--YDEVPGKFVEWNNAVIGEPLKPFRRAADAI-  158 (236)
T ss_dssp             T------T---------HHHHHHHHHHHHHH--TTCCEEEEECCCCC------------------CGGGHHHHHHHHHH-
T ss_pred             C------c---------hhHHHHHHHHHHHH--cCCCEEEEEeccee--cCCCCcccccchhhcccchHHHHHHHHHHH-
Confidence            2      0         01246689999998  68899999999988  876544322211111 12223333232222 


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCceEEecCC
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP  256 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~~i~~~  256 (328)
                         ...+++++++|||.++++........      ..+.+     ....+++++|+|++++.++..+.  .++.|+++++
T Consensus       159 ---~~~gi~~~~vrPg~i~~~~~~~~~~~------~~~~~-----~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          159 ---EASGLEYTILRPAWLTDEDIIDYELT------SRNEP-----FKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             ---HTSCSEEEEEEECEEECCSCCCCEEE------CTTSC-----CSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred             ---HHCCCCEEEEeCCcccCCCCcceEEe------ccCCC-----CCCcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence               23699999999999999754221100      01111     12358999999999999999876  4559999987


Q ss_pred             Cc
Q 020254          257 NP  258 (328)
Q Consensus       257 ~~  258 (328)
                      ..
T Consensus       225 ~~  226 (236)
T 3qvo_A          225 GT  226 (236)
T ss_dssp             SC
T ss_pred             CC
Confidence            63

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.93  E-value=1.2e-25  Score=194.43  Aligned_cols=222  Identities=16%  Similarity=0.180  Sum_probs=156.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-c---CCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-I---FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |+++|+||||||+||+++++.|+++|++|++++|++..... +   ....  .....+|+.|++++.++++++|+|||++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG--AIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC--CEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            44689999999999999999999999999999998752211 1   0110  1145679999999999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCC---CchHHHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYLAEVCR  173 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~---~~y~~k~~~  173 (328)
                      +..                ++.++.++++++++  .+ ++++|+ |   +  ||...    ++..+..   +.|..|...
T Consensus        88 ~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~----~~~~~~~p~~~~y~sK~~~  139 (318)
T 2r6j_A           88 AFP----------------QILDQFKILEAIKV--AGNIKRFLP-S---D--FGVEE----DRINALPPFEALIERKRMI  139 (318)
T ss_dssp             CGG----------------GSTTHHHHHHHHHH--HCCCCEEEC-S---C--CSSCT----TTCCCCHHHHHHHHHHHHH
T ss_pred             chh----------------hhHHHHHHHHHHHh--cCCCCEEEe-e---c--cccCc----ccccCCCCcchhHHHHHHH
Confidence            852                25678899999998  56 888874 3   2  55322    2222222   234444433


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-HH-HcCCC---CCCCCcccccccHHHHHHHHHHHhhCCC-C
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MM-FAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-Y  247 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~  247 (328)
                      +...    ...+++++++||+.+++.       +.+.+ .. ..+..   .++++..+++++++|++++++.++..+. .
T Consensus       140 e~~~----~~~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~  208 (318)
T 2r6j_A          140 RRAI----EEANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL  208 (318)
T ss_dssp             HHHH----HHTTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT
T ss_pred             HHHH----HhcCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc
Confidence            3332    235899999999987764       12211 11 12222   2566788999999999999999998765 3


Q ss_pred             CceEEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHHH
Q 020254          248 RGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEFA  284 (328)
Q Consensus       248 ~g~~~i~~-~~~~~~~e~~~~i~~~~g~~~-~~~~p~~~  284 (328)
                      ++.|++.+ ++.+|+.|+++.+.+.+|++. ...+|...
T Consensus       209 ~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  247 (318)
T 2r6j_A          209 NRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEE  247 (318)
T ss_dssp             TEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHH
T ss_pred             CeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHH
Confidence            45788765 478999999999999999873 23455443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.93  E-value=2.1e-26  Score=198.18  Aligned_cols=225  Identities=16%  Similarity=0.218  Sum_probs=156.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--c-------ccCCCCCccccCceeecCChhhHhhcCCCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--E-------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      ||+|+||||||+||+++++.|+++|++|++++|++...  .       .+....  .....+|+.|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG--ANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTT--CEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCC--CEEEEeccCCHHHHHHHHcCCCEE
Confidence            57899999999999999999999999999999986432  1       000111  114467999999999999999999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCC---CchHH
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYLA  169 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~---~~y~~  169 (328)
                      ||+++..                ++.++.+++++|++  .+ ++++|+ |+     ||...    ++..+..   +.|.+
T Consensus        82 i~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S~-----~g~~~----~~~~~~~p~~~~y~s  133 (308)
T 1qyc_A           82 ISTVGSL----------------QIESQVNIIKAIKE--VGTVKRFFP-SE-----FGNDV----DNVHAVEPAKSVFEV  133 (308)
T ss_dssp             EECCCGG----------------GSGGGHHHHHHHHH--HCCCSEEEC-SC-----CSSCT----TSCCCCTTHHHHHHH
T ss_pred             EECCcch----------------hhhhHHHHHHHHHh--cCCCceEee-cc-----cccCc----cccccCCcchhHHHH
Confidence            9999852                25678899999998  66 888873 32     55322    2223322   23444


Q ss_pred             HHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          170 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       170 k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      |...+....    ..+++++++||+.++++.........  .....+..   .++++..+++++++|+|++++.++..+.
T Consensus       134 K~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  207 (308)
T 1qyc_A          134 KAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG--LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR  207 (308)
T ss_dssp             HHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT--CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG
T ss_pred             HHHHHHHHH----hcCCCeEEEEeceecccccccccccc--ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc
Confidence            443333322    24899999999999885321111100  00001111   2567788999999999999999998765


Q ss_pred             -CCceEEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHH
Q 020254          247 -YRGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEF  283 (328)
Q Consensus       247 -~~g~~~i~~-~~~~~~~e~~~~i~~~~g~~~-~~~~p~~  283 (328)
                       .+++|++.+ ++.+|+.|+++.+.+.+|++. ...+|..
T Consensus       208 ~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~  247 (308)
T 1qyc_A          208 TLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEE  247 (308)
T ss_dssp             GTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHH
T ss_pred             ccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHH
Confidence             345788876 478999999999999999873 2345543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=6e-26  Score=190.01  Aligned_cols=220  Identities=15%  Similarity=0.052  Sum_probs=155.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC----CCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~   98 (328)
                      ||+||||||+|+||++++++|+++|++|++++|++.+...         ...+|+.|.++++++++    ++|+|||+||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag   71 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAG   71 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------cccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence            4689999999999999999999999999999998765432         13479999988888875    8999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcc-cccC-------C--------
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETE-VFDE-------S--------  160 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~-~~~e-------~--------  160 (328)
                      ....    ...++..+++|+.++.++++++.+.  +.+.+++|++||..+  |+..... +..|       +        
T Consensus        72 ~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (255)
T 2dkn_A           72 VGVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA--TQPGAAELPMVEAMLAGDEARAIELAEQ  145 (255)
T ss_dssp             CCTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc--ccccccccchhhhhcccchhhhhhhccc
Confidence            7421    2346788999999999999987652  235689999999988  6643211 1100       0        


Q ss_pred             -CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hh-hHHHHHHHcCCCCCCCCcccccccHHH
Q 020254          161 -SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       161 -~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                       .++...| .+|...+.....+..+   .+++++++|||.++|+..... .. ...  .....  .. + ....+++++|
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~--~~~~~--~~-~-~~~~~~~~~d  219 (255)
T 2dkn_A          146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYG--ESTRR--FV-A-PLGRGSEPRE  219 (255)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTH--HHHHS--CC-C-TTSSCBCHHH
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhH--HHHHH--HH-H-HhcCCCCHHH
Confidence             1233456 7777777666655544   589999999999998742111 00 000  00000  00 1 3346899999


Q ss_pred             HHHHHHHHhhCC--C-CCceEEecCCCccCHHH
Q 020254          234 IVNLIYEALSNP--S-YRGVINGTAPNPVRLAE  263 (328)
Q Consensus       234 ~a~~~~~~~~~~--~-~~g~~~i~~~~~~~~~e  263 (328)
                      +|++++.++..+  . .+.+|+++++..++++|
T Consensus       220 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          220 VAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            999999999865  2 34599999987666543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.93  E-value=9.2e-26  Score=194.10  Aligned_cols=224  Identities=19%  Similarity=0.166  Sum_probs=154.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-------ccccc---CCCCCccccCceeecCChhhHhhcCCCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------KAELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      ||+|+||||||+||+++++.|+++|++|++++|+++       +...+   ....  .....+|+.|++++.++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLG--VILLEGDINDHETLVKAIKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCC--CEEEEeCCCCHHHHHHHHhCCCE
Confidence            578999999999999999999999999999999871       11110   0000  11445799999999999999999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCC---CchH
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYL  168 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~---~~y~  168 (328)
                      |||+++...                +.++.++++++++  .+ ++++|+ |   +  ||...    ++..+..   +.|.
T Consensus        80 vi~~a~~~~----------------~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~----~~~~~~~p~~~~y~  131 (307)
T 2gas_A           80 VICAAGRLL----------------IEDQVKIIKAIKE--AGNVKKFFP-S---E--FGLDV----DRHDAVEPVRQVFE  131 (307)
T ss_dssp             EEECSSSSC----------------GGGHHHHHHHHHH--HCCCSEEEC-S---C--CSSCT----TSCCCCTTHHHHHH
T ss_pred             EEECCcccc----------------cccHHHHHHHHHh--cCCceEEee-c---c--cccCc----ccccCCCcchhHHH
Confidence            999998631                5677899999998  66 888873 2   2  55322    2222222   2444


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      +|...+....    ..+++++++||+.++++....+....  ........   .++++..+++++++|+|++++.++..+
T Consensus       132 sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (307)
T 2gas_A          132 EKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLD--ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDP  205 (307)
T ss_dssp             HHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTT--CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCG
T ss_pred             HHHHHHHHHH----HcCCCeEEEEcceeeccccccccccc--cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCc
Confidence            4444333332    24899999999998886422111100  00001111   256677899999999999999999876


Q ss_pred             CC-CceEEecC-CCccCHHHHHHHHHHHhCCCCC-CCCcH
Q 020254          246 SY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPE  282 (328)
Q Consensus       246 ~~-~g~~~i~~-~~~~~~~e~~~~i~~~~g~~~~-~~~p~  282 (328)
                      .. ++.|++.+ ++.+|+.|+++.+.+.+|++.. ..+|.
T Consensus       206 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~  245 (307)
T 2gas_A          206 NTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSE  245 (307)
T ss_dssp             GGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECH
T ss_pred             cccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCH
Confidence            53 45778776 4789999999999999998732 34453

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=8.1e-25  Score=179.16  Aligned_cols=199  Identities=13%  Similarity=0.119  Sum_probs=138.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH-hCCCeEEEEecCCC-cccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRS-KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      |++|+||||+|+||+++++.|+ +.|++|++++|++. +...+...........+|+.|.+++.++++++|+|||+|+..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            3459999999999999999999 89999999999876 544331011111244679999999999999999999999852


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC-ch-HHHHHHHHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DY-LAEVCREWEGT  178 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~-~y-~~k~~~~~~~~  178 (328)
                                      |+. ++++++++++  .+++++|++||.++  |+..+........+... .| ..|...+.+..
T Consensus        85 ----------------n~~-~~~~~~~~~~--~~~~~iv~iSs~~~--~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~  143 (221)
T 3r6d_A           85 ----------------GSD-MASIVKALSR--XNIRRVIGVSMAGL--SGEFPVALEKWTFDNLPISYVQGERQARNVLR  143 (221)
T ss_dssp             ----------------HHH-HHHHHHHHHH--TTCCEEEEEEETTT--TSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             ----------------Chh-HHHHHHHHHh--cCCCeEEEEeecee--cCCCCcccccccccccccHHHHHHHHHHHHHH
Confidence                            334 8899999998  68889999999988  77543221111111222 46 55554444432


Q ss_pred             HhcccCCCeEEEEEeceEEcCC-CcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh--hCCC--CCceEEe
Q 020254          179 ALKVNKDVRLALIRIGIVLGKD-GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL--SNPS--YRGVING  253 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~--~~~~--~~g~~~i  253 (328)
                          ..+++++++|||.++++. .......      ..+.+     ....+++.+|+|++++.++  ..+.  .++.+.+
T Consensus       144 ----~~~i~~~~vrpg~v~~~~~~~~~~~~------~~~~~-----~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i  208 (221)
T 3r6d_A          144 ----ESNLNYTILRLTWLYNDPEXTDYELI------PEGAQ-----FNDAQVSREAVVKAIFDILHAADETPFHRTSIGV  208 (221)
T ss_dssp             ----HSCSEEEEEEECEEECCTTCCCCEEE------CTTSC-----CCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred             ----hCCCCEEEEechhhcCCCCCcceeec------cCCcc-----CCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence                368999999999999983 2111000      00111     1123799999999999999  7665  3457777


Q ss_pred             cCCC
Q 020254          254 TAPN  257 (328)
Q Consensus       254 ~~~~  257 (328)
                      .++.
T Consensus       209 ~~~~  212 (221)
T 3r6d_A          209 GEPG  212 (221)
T ss_dssp             ECTT
T ss_pred             cCCC
Confidence            7654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.92  E-value=8.2e-25  Score=189.36  Aligned_cols=221  Identities=14%  Similarity=0.138  Sum_probs=156.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-Cc-----cccc---CCCCCccccCceeecCChhhHhhcCCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SK-----AELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~-----~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      +||+|+||||||+||+++++.|+++|++|++++|++ ..     ...+   ....  .....+|+.|++++.++++++|+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~--v~~v~~D~~d~~~l~~a~~~~d~   80 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMG--VTIIEGEMEEHEKMVSVLKQVDI   80 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCC--cEEEEecCCCHHHHHHHHcCCCE
Confidence            467899999999999999999999999999999987 21     1100   0000  11456799999999999999999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CCcEEEEecccceeecCCCcccccCCCCCC---CchH
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYL  168 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~---~~y~  168 (328)
                      |||+++..                ++.++.++++++++  .+ ++++|+ |   +  ||...    ++..+..   +.|.
T Consensus        81 vi~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~----~~~~~~~p~~~~y~  132 (321)
T 3c1o_A           81 VISALPFP----------------MISSQIHIINAIKA--AGNIKRFLP-S---D--FGCEE----DRIKPLPPFESVLE  132 (321)
T ss_dssp             EEECCCGG----------------GSGGGHHHHHHHHH--HCCCCEEEC-S---C--CSSCG----GGCCCCHHHHHHHH
T ss_pred             EEECCCcc----------------chhhHHHHHHHHHH--hCCccEEec-c---c--cccCc----cccccCCCcchHHH
Confidence            99999852                16778899999998  66 888872 2   3  55322    2223322   2344


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHH-----HcCCC---CCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-----FAGGP---LGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...|....    ..+++++++||+.++++..       +.+..     ..+..   .++++..+++++++|+|++++.
T Consensus       133 sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (321)
T 3c1o_A          133 KKRIIRRAIE----AAALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK  201 (321)
T ss_dssp             HHHHHHHHHH----HHTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HcCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence            4444433332    2489999999999887521       11110     11222   2566788999999999999999


Q ss_pred             HhhCCCC-CceEEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHH
Q 020254          241 ALSNPSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEF  283 (328)
Q Consensus       241 ~~~~~~~-~g~~~i~~-~~~~~~~e~~~~i~~~~g~~~-~~~~p~~  283 (328)
                      ++..+.. +++|++.+ ++.+|+.|+++.+.+.+|++. ...+|..
T Consensus       202 ~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  247 (321)
T 3c1o_A          202 VACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDE  247 (321)
T ss_dssp             HHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHH
T ss_pred             HHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHH
Confidence            9988653 45788876 578999999999999999873 3345543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.92  E-value=2.1e-24  Score=182.94  Aligned_cols=235  Identities=11%  Similarity=0.037  Sum_probs=167.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      ..++|+||||+|+||++++++|+++|++|++++|+........   .......+..+|+.|+++++++++       ++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4578999999999999999999999999999999865432211   100011244679999988887765       799


Q ss_pred             EEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           92 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        92 ~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|||+||....     .....+.+...+++|+.++.++++++...  ..+.+++|++||...  |...+        ...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~~--------~~~  164 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS--FTAGE--------GVS  164 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG--TCCCT--------TSC
T ss_pred             EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc--cCCCC--------CCC
Confidence            99999996432     23445778889999999999999887652  135679999999887  55321        123


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch----hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ..| .+|...+.....+..+   .+++++++|||.++++.....    ......+.....      .....+++++|+|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~  238 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA------NLKGTLLRAEDVAD  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC------SSCSCCCCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc------ccccccCCHHHHHH
Confidence            457 7777776666555432   589999999999999864321    111111111111      11234799999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCccCHHHHHHHHHHHh
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVL  272 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~  272 (328)
                      +++.++....   .+.+|++.++..+++.|+++.+.+.+
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            9999986532   34499999999999999999887654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.92  E-value=2.7e-24  Score=182.52  Aligned_cols=233  Identities=14%  Similarity=0.024  Sum_probs=165.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.......... .....+..+|+.|.++++++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            457899999999999999999999999999999987665433211 1111244679999988887765       78999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhh----HHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||....   .....+.+...+++|+.+    ++.+++.+++  .+..++|++||...  +..         .++...
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~~sS~~~--~~~---------~~~~~~  150 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE--RGSGSVVNISSFGG--QLS---------FAGFSA  150 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TCC---------CTTCHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEEcCccc--cCC---------CCCchH
Confidence            999997422   245567788899999999    5555555565  56789999999875  332         223456


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc--------hhhhHHHH----HHHcCCCCCCCCccccccc
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--------LAKMIPLF----MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~----~~~~~~~~~~~~~~~~~i~  230 (328)
                      | .+|...+.....+..+   .|++++++|||.+.++..+.        ...+....    .....      .....+.+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  224 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQG------SDGSQPGD  224 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----------CBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhh------ccCCCCCC
Confidence            7 7788777776666554   58999999999998874211        11111111    11111      12345788


Q ss_pred             HHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhC
Q 020254          231 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  273 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g  273 (328)
                      ++|+|++++.++..+..++.|+++++......+....+.+.++
T Consensus       225 ~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          225 PAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            9999999999999887777999998876676777777666553

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.90  E-value=1e-23  Score=175.25  Aligned_cols=218  Identities=21%  Similarity=0.145  Sum_probs=153.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~   98 (328)
                      +.|+|+||||+|+||++++++|+++|++|++++|++.................+|+.|.++++++++   ++|+|||+||
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            4579999999999999999999999999999999875433221100001133679999999988886   5899999999


Q ss_pred             CCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254           99 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus        99 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      ....   .....+.++..+++|+.++.++++++.+.  +.+ .+++|++||...  |...         +....| .+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~  154 (244)
T 1cyd_A           86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA--HVTF---------PNLITYSSTKG  154 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCC---------TTBHHHHHHHH
T ss_pred             ccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhh--cCCC---------CCcchhHHHHH
Confidence            7532   23345677889999999999988887652  023 578999999876  5432         223457 7777


Q ss_pred             HHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          172 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       172 ~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ..+.....+..+   .+++++++|||.++++.....   ..+..  ....+.+      ...+++++|+|++++.++..+
T Consensus       155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          155 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHP------LRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHST------TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHH--HHHhcCC------ccCCCCHHHHHHHHHHHhCch
Confidence            777666555443   489999999999998742211   11111  1112222      246899999999999999764


Q ss_pred             C---CCceEEecCCCc
Q 020254          246 S---YRGVINGTAPNP  258 (328)
Q Consensus       246 ~---~~g~~~i~~~~~  258 (328)
                      .   .+..+++.++..
T Consensus       227 ~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          227 SASTSGGGILVDAGYL  242 (244)
T ss_dssp             GTTCCSSEEEESTTGG
T ss_pred             hhcccCCEEEECCCcc
Confidence            3   344888887753

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.90  E-value=8.9e-24  Score=176.80  Aligned_cols=221  Identities=14%  Similarity=0.090  Sum_probs=155.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..|+|+||||+|+||++++++|+++|++|++++|++........    .........+|+.|+++++++++       ++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            45799999999999999999999999999999998654332211    01111234579999988887775       89


Q ss_pred             cEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           91 TAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        91 d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      |+|||+||.....  ....+.++..+++|+.++.++++++...  +.+.+++|++||...  +...         ++...
T Consensus        90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~  158 (255)
T 1fmc_A           90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--ENKN---------INMTS  158 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCCC---------TTCHH
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--cCCC---------CCCcc
Confidence            9999999975332  3456778899999999999998887531  135678999999876  4422         23345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc--hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      | .+|...+.....+..+   .+++++++|||.++++....  ...+..  ....+.|+      ..+.+++|+|++++.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~~~~  230 (255)
T 1fmc_A          159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPI------RRLGQPQDIANAALF  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSS------CSCBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHH--HHHhcCCc------ccCCCHHHHHHHHHH
Confidence            7 7777776665555433   48999999999999874211  111111  22233333      237899999999999


Q ss_pred             HhhCCC---CCceEEecCCCccCH
Q 020254          241 ALSNPS---YRGVINGTAPNPVRL  261 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~~~~  261 (328)
                      ++..+.   .+.+|++.++..+|+
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          231 LCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HhCCccccCCCcEEEECCceeccC
Confidence            987542   244999999987764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.90  E-value=3e-23  Score=167.43  Aligned_cols=190  Identities=13%  Similarity=0.090  Sum_probs=142.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~   99 (328)
                      +|+|+||||+|+||++++++|+ +|++|++++|++.             ...+|+.|+++++++++   ++|+|||+||.
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            4689999999999999999999 9999999999864             23479999998888776   48999999996


Q ss_pred             CCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHH
Q 020254          100 PIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  175 (328)
Q Consensus       100 ~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  175 (328)
                      ....   ....+.+...+++|+.++.++++++.+......++|++||...  +..         .+....| .+|...+.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~sK~~~~~  137 (202)
T 3d7l_A           69 ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMM--EDP---------IVQGASAAMANGAVTA  137 (202)
T ss_dssp             CCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGG--TSC---------CTTCHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhh--cCC---------CCccHHHHHHHHHHHH
Confidence            4332   2345667788899999999999999873111268999999765  332         1233457 77777777


Q ss_pred             HHHHhccc--CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEe
Q 020254          176 EGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  253 (328)
Q Consensus       176 ~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i  253 (328)
                      ....+..+  .+++++++||+.++++...          ...      ....+.+++++|+|++++.++.....+.+|++
T Consensus       138 ~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----------~~~------~~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          138 FAKSAAIEMPRGIRINTVSPNVLEESWDK----------LEP------FFEGFLPVPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHTTSCSTTCEEEEEEECCBGGGHHH----------HGG------GSTTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             HHHHHHHHccCCeEEEEEecCccCCchhh----------hhh------hccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence            77666554  4899999999999987420          001      11235689999999999998865444448886

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.90  E-value=1.9e-22  Score=168.89  Aligned_cols=216  Identities=14%  Similarity=0.048  Sum_probs=155.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      .+.++||||||+|+||+++++.|+++|++|++++|+........     ..+..+|+.|+++++++++       ++|++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD-----IHTVAGDISKPETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTT-----EEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCc-----eEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            45678999999999999999999999999999999876543221     1245689999998887765       79999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +....       .++...| 
T Consensus       101 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~~-------~~~~~~Y~  171 (260)
T 3un1_A          101 VNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLV--DQPMV-------GMPSALAS  171 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTT--TSCBT-------TCCCHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhh--ccCCC-------CCccHHHH
Confidence            9999975432   3456778899999999999999887321  146678999999776  33211       1123456 


Q ss_pred             HHHHHHHHHHHHhcccC---CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|...+.....++.+.   |+++.+++||.++++....  ....  ......|+      ..+.+++|+|++++.+...
T Consensus       172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~--~~~~~~p~------~r~~~~~dva~av~~L~~~  241 (260)
T 3un1_A          172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--ETHS--TLAGLHPV------GRMGEIRDVVDAVLYLEHA  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG--GGHH--HHHTTSTT------SSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH--HHHH--HHhccCCC------CCCcCHHHHHHHHHHhccc
Confidence            66777777666655544   8999999999999985422  1111  11122222      3467899999999999655


Q ss_pred             CCC-CceEEecCCCccC
Q 020254          245 PSY-RGVINGTAPNPVR  260 (328)
Q Consensus       245 ~~~-~g~~~i~~~~~~~  260 (328)
                      ... +.++++.+|...+
T Consensus       242 ~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          242 GFITGEILHVDGGQNAG  258 (260)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCCCCcEEEECCCeecc
Confidence            443 4499998886543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.89  E-value=1.4e-23  Score=179.94  Aligned_cols=235  Identities=15%  Similarity=0.043  Sum_probs=163.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.|+|+||||+|+||++++++|+++|++|++++|+..+.......     .....+..+|+.|.++++++++       +
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999987543322110     1111244679999888877664       5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||....   .....+.++..+++|+.++.++++++...   ..+..++|++||...  +..         .+.
T Consensus       105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~  173 (302)
T 1w6u_A          105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA--ETG---------SGF  173 (302)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH--HHC---------CTT
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc--ccC---------CCC
Confidence            6999999996432   13456778899999999999998877542   134578999999765  432         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC-cch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ...| .+|...+.....+..+   .|++++++|||.++++.. ... .............|+      ..+.+++|+|++
T Consensus       174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~  247 (302)
T 1w6u_A          174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC------GRLGTVEELANL  247 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT------SSCBCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc------CCCCCHHHHHHH
Confidence            3457 7777777766655544   589999999999998732 111 111111122222232      237899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccCHHHHHHHHHHHhC
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLG  273 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~~~e~~~~i~~~~g  273 (328)
                      ++.++....   .+.+|++.+|..+++.++++.+.+..|
T Consensus       248 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          248 AAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             HHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            999987533   344999999988888888888877665

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.89  E-value=8.4e-23  Score=169.72  Aligned_cols=219  Identities=18%  Similarity=0.146  Sum_probs=153.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA   97 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a   97 (328)
                      .+.++|+||||+|+||++++++|+++|++|++++|++.+...............+|+.|.++++++++   ++|+|||+|
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence            34578999999999999999999999999999999865443221110001134679999999988885   589999999


Q ss_pred             CCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      |.....   ....+.++..+++|+.++.++++++.+.  ..+ .+++|++||...  +...         +....| .+|
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK  153 (244)
T 3d3w_A           85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS--QRAV---------TNHSVYCSTK  153 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCC---------TTBHHHHHHH
T ss_pred             ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhh--ccCC---------CCCchHHHHH
Confidence            975332   2345678889999999998888877652  023 578999999876  4421         223457 778


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      ...+.....+..+   .+++++++|||.++++.....   .....  ......|.      ..+++++|+|++++.++..
T Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~~~~l~~~  225 (244)
T 3d3w_A          154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK--TMLNRIPL------GKFAEVEHVVNAILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHH--HHHHTCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHH--HHHhhCCC------CCCcCHHHHHHHHHHHcCc
Confidence            7777766555443   489999999999998753211   11111  11122222      3578999999999999975


Q ss_pred             CC---CCceEEecCCCc
Q 020254          245 PS---YRGVINGTAPNP  258 (328)
Q Consensus       245 ~~---~~g~~~i~~~~~  258 (328)
                      ..   .+.+|++.+|..
T Consensus       226 ~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          226 RSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             cccCCCCCEEEECCCcc
Confidence            42   344999988753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=6.1e-23  Score=173.89  Aligned_cols=234  Identities=15%  Similarity=0.133  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-------CCCCccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-------PGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++.+.....       ..........+|+.|+++++++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999865433211       111111234579999988887775      


Q ss_pred             -CCcEEEECCCCCCCC---CC----ChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccccc
Q 020254           89 -GSTAVVNLAGTPIGT---RW----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                       ++|+|||+||.....   ..    ..+.++..+++|+.++.++++++...  ..+ +++|++||......+        
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~--------  155 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA--------  155 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC--------
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC--------
Confidence             899999999974321   22    56678889999999999999888762  013 789999997641121        


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch----hhh---HHHH-HHHcCCCCCCCCccc
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKM---IPLF-MMFAGGPLGSGQQWF  226 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~---~~~~-~~~~~~~~~~~~~~~  226 (328)
                        .+....| .+|...+.....+..+   .|++++++|||.+.++.....    ...   .... ......|+      .
T Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~  227 (278)
T 1spx_A          156 --TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA------G  227 (278)
T ss_dssp             --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT------S
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC------c
Confidence              1223457 6777666665544432   589999999999998753211    011   0001 11111122      2


Q ss_pred             ccccHHHHHHHHHHHhhCCC----CCceEEecCCCccCHHHHHHHHHHHh
Q 020254          227 SWIHLDDIVNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVL  272 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~----~~g~~~i~~~~~~~~~e~~~~i~~~~  272 (328)
                      .+.+++|+|++++.++..+.    .+.++++.+|..++..++++.+.+++
T Consensus       228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            37899999999999886532    24499999999999999999988764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.89  E-value=1.6e-23  Score=177.60  Aligned_cols=238  Identities=21%  Similarity=0.137  Sum_probs=168.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCC---ccccCceeecCChhhHhhcC-----
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      .+.++|+||||+|+||++++++|+++|++|++++|++.......    ....   ...+..+|+.|+++++++++     
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999876533221    1110   11244579999888877664     


Q ss_pred             --CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                        ++|++||+||....    .....+.++..+++|+.++.++++++.+.  +.+..++|++||...  +...        
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~--------  158 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA--SNTH--------  158 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH--HSCC--------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH--cCCC--------
Confidence              68999999996221    34556778899999999999999877652  134458999999876  4322        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                       +....| .+|...+.....++.+   .++++.+++||.+.++............ ......|+      ..+.+++|+|
T Consensus       159 -~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva  231 (281)
T 3svt_A          159 -RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL------PRQGEVEDVA  231 (281)
T ss_dssp             -TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS------SSCBCHHHHH
T ss_pred             -CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC------CCCCCHHHHH
Confidence             234567 7787777776655543   3799999999999987432111101111 11222232      2367899999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCCccC-HHHHHHHHHHHhCCC
Q 020254          236 NLIYEALSNPS---YRGVINGTAPNPVR-LAEMCDHLGNVLGRP  275 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~~~~-~~e~~~~i~~~~g~~  275 (328)
                      ++++.++....   .+.++++.+|...+ ..++.+.+.+.+|.+
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            99999987543   34599999988776 778888888888865

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.89  E-value=1.7e-23  Score=175.41  Aligned_cols=230  Identities=12%  Similarity=0.069  Sum_probs=157.0

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCc
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      ....+++|||||+|+||++++++|+++|++|++++|+.......... ........+|+.|+++++++++       ++|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            34457899999999999999999999999999999987654332211 0111245689999988887765       799


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+||....   .....+.++..+++|+.++.++++++...  +.+ ..++|++||...  +...         +...
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  153 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAG--RRGE---------ALVA  153 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSCC---------TTBH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhh--ccCC---------CCCh
Confidence            99999997533   23456788899999999999999887652  012 458999999876  3321         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC-C---CCCCCcccccccHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-P---LGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~i~v~D~a~~  237 (328)
                      .| .+|...+.....++.+   .++++.+++||.++++.......+...+...... .   +........+.+++|+|++
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  233 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            57 7787777766655543   3899999999999998532221111111000000 0   0111223458899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccC
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++.++....   .+.+|++.+|..+|
T Consensus       234 v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          234 AIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHhCCccCCCCCCEEEECcChhcC
Confidence            999886533   34599999987553

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.89  E-value=1.3e-22  Score=170.52  Aligned_cols=222  Identities=13%  Similarity=0.085  Sum_probs=153.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++.+.......     ........+|+.|+++++++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999987543322110     1111244579999988877765       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||....   .....+.++..+++|+.++.++++++...  +.+.+++|++||...  +...         +..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  154 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICA--VQPL---------WYE  154 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------TTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--cCCC---------CCc
Confidence            9999999997532   23456778899999999999888877531  135678999999876  5432         233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh---------hHHHH-HHHcC-CCCCCCCcccccc
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK---------MIPLF-MMFAG-GPLGSGQQWFSWI  229 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~-~~~~~-~~~~~~~~~~~~i  229 (328)
                      ..| .+|...+.....+..+   .|++++++|||.++++.......         .-... ..... .|+      ..+.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~  228 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI------KRFA  228 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTT------CSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCC------CCCc
Confidence            457 7777766666555443   58999999999999874211100         00001 11111 222      3478


Q ss_pred             cHHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          230 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      +++|+|++++.++..+.   .+.+|++.+|...+
T Consensus       229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          229 SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999999999987643   34499999887554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.89  E-value=5.8e-22  Score=165.24  Aligned_cols=218  Identities=14%  Similarity=0.042  Sum_probs=149.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----C-CCCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +++|+||||+|+||++++++|+++|++|++++|+..+.....    . .........+|+.|+++++++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999865433211    1 11111234579999988887765       79


Q ss_pred             cEEEECCCCCCCC------CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           91 TAVVNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        91 d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      |+|||+||.....      ....+.++..+++|+.++..+++++...  ..+.+++|++||...  +...         +
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~  150 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVAS--LVAF---------P  150 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------T
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhh--ccCC---------C
Confidence            9999999975322      2345678889999999987766665431  135679999999876  4321         2


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....+..+   .+++++++|||.++++........-... ......|+      ..+.+++|+|++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~  224 (250)
T 2cfc_A          151 GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ------KEIGTAAQVADA  224 (250)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT------CSCBCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence            33467 7777776666555433   3899999999999998643210000111 12222232      236899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++.++..+.   .+.++++.+|.
T Consensus       225 ~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          225 VMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHcCchhhcccCCEEEECCce
Confidence            999987653   24488888764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.89  E-value=1e-23  Score=170.81  Aligned_cols=196  Identities=16%  Similarity=0.126  Sum_probs=143.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  100 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~~  100 (328)
                      |+|+||||+|+||++++++|+++  +|++++|++.+.......... .+..+|+.|+++++++++   ++|+|||+||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            57999999999999999999998  999999987554332110000 255689999999998887   899999999975


Q ss_pred             CCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHH
Q 020254          101 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  176 (328)
Q Consensus       101 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  176 (328)
                      ...   ....+.+...+++|+.++.++++++.+  .+.+++|++||...  |...         ++...| .+|...+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPR--YVQV---------PGFAAYAAAKGALEAY  144 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHH--HHSS---------TTBHHHHHHHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhh--ccCC---------CCcchHHHHHHHHHHH
Confidence            332   234567788999999999999999966  56789999999887  5422         233457 677776666


Q ss_pred             HHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEE
Q 020254          177 GTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN  252 (328)
Q Consensus       177 ~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~  252 (328)
                      ...+..+   .+++++++|||.++++...           ..      +.....+++++|+|++++.++..+....+++
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------~~------~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~  206 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWA-----------PL------GGPPKGALSPEEAARKVLEGLFREPVPALLE  206 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------GG------TSCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCcc-----------cc------CCCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence            6555444   5899999999999987410           01      1223568999999999999998876444443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.88  E-value=5.7e-22  Score=166.27  Aligned_cols=219  Identities=11%  Similarity=0.052  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..++|+||||+|+||++++++|+++|++|++++|+.........    ......+..+|+.|+++++++++       ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998654322110    01111244679999988887764       79


Q ss_pred             cEEEECCCCCC-C---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |+|||+||... .   .....+.+...+++|+.++.++++++.+.  ..+..++|++||...  +...+.       .+.
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~-------~~~  162 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSG--LIVNRP-------QQQ  162 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCSS-------SCC
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchh--cccCCC-------CCc
Confidence            99999999653 1   23455667889999999999998887642  135678999999765  332111       112


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-chh--hhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ..| .+|...+.....+..+   .+++++++|||.++++... ...  .+..  ....+.|+      ..+++++|+|++
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~  234 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYD--AWIAGTPM------GRVGQPDEVASV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHH--HHHHTCTT------SSCBCHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHH--HHHhcCCc------CCCCCHHHHHHH
Confidence            457 7777777666655544   5899999999999998643 111  1111  12223332      237899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++.++....   .+.+|++.++.
T Consensus       235 ~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          235 VQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhccCCCcEEEECCce
Confidence            999987532   33489998875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.88  E-value=1.3e-21  Score=164.98  Aligned_cols=216  Identities=16%  Similarity=0.066  Sum_probs=155.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ...++++||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.++++++++       ++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4467999999999999999999999999999999998764433211 1111244679999988887775       7999


Q ss_pred             EEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           93 VVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        93 vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +||+||....     .....+.++..+++|+.++..+++++    ++  .+..++|++||...  +..         .+.
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~  155 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS--AGGGAIVNISSATA--HAA---------YDM  155 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSB---------CSS
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEECCHHH--cCC---------CCC
Confidence            9999997522     13456778899999999999999988    44  46679999999876  332         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-ch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-AL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ...| .+|...+.....++.+   .|+++.+++||.++++... .. .....  ......+.      ..+..++|+|++
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~------~r~~~p~dvA~~  227 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVD--IFATHHLA------GRIGEPHEIAEL  227 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHH--HHHTTSTT------SSCBCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence            3467 7787777766655554   5899999999999998543 11 11111  11222222      226789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++.++....   .+.++++.+|.
T Consensus       228 v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          228 VCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCcccCCcCCCEEEECCCc
Confidence            999987543   34499998883

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.88  E-value=1.8e-22  Score=169.66  Aligned_cols=222  Identities=14%  Similarity=0.046  Sum_probs=148.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-----------CccccCceeecCChhhHhhcC--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-----------KTRFFPGVMIAEEPQWRDCIQ--   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~--   88 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|+...........           .......+|+.|.++++++++  
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999875533221110           111244579999888877765  


Q ss_pred             -----CC-cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCccc
Q 020254           89 -----GS-TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        89 -----~~-d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                           ++ |+|||+||.....   ....+.++..+++|+.++.++++++.+.  +.+ ..++|++||.... ++.     
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-~~~-----  159 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK-VGN-----  159 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH-HCC-----
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc-cCC-----
Confidence                 34 9999999975332   3456778899999999999999988762  113 4689999997641 221     


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-H-HHcCCCCCCCCccccccc
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~  230 (328)
                           +....| .+|...+.....+..+   .+++++++|||.++++.....   .... . .....|      ...+.+
T Consensus       160 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~  225 (264)
T 2pd6_A          160 -----VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMIP------MGHLGD  225 (264)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGCT------TCSCBC
T ss_pred             -----CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhCC------CCCCCC
Confidence                 223457 7777666665554443   589999999999999854221   1111 0 011111      124689


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCccCHHH
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAE  263 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~~~e  263 (328)
                      ++|+|++++.++....   .+..+++.++..++...
T Consensus       226 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          226 PEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             HHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            9999999999987532   34489998887665443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=1.1e-21  Score=162.78  Aligned_cols=212  Identities=18%  Similarity=0.135  Sum_probs=149.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC------CCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~   96 (328)
                      +|+|+||||+|+||++++++|+++|++|++++|++. ....       .+..+|+.|.++++++++      ++|+|||+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~-------~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDL-------IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSS-------EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccce-------EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            478999999999999999999999999999999876 2111       155689999998888876      78999999


Q ss_pred             CCCCCCCC---C----ChhHHHHHHHhhhhhHHHHHHHHhcC-C-CC------CCcEEEEecccceeecCCCcccccCCC
Q 020254           97 AGTPIGTR---W----SSEIKKEIKESRIRVTSKVVDLINES-P-EG------VRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        97 a~~~~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~------~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      ||......   .    ..+.++..+++|+.++.++++++.+. . .+      ..++|++||...  +...         
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------  142 (242)
T 1uay_A           74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA--FEGQ---------  142 (242)
T ss_dssp             CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH--HHCC---------
T ss_pred             ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh--ccCC---------
Confidence            99753321   1    12277889999999999999988753 1 11      138999999876  5432         


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....+..+   .+++++++|||.++++..... ..+..  ......++.     ..+++++|+|+
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~dva~  215 (242)
T 1uay_A          143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKA--SLAAQVPFP-----PRLGRPEEYAA  215 (242)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHH--HHHTTCCSS-----CSCCCHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHH--HHHhhCCCc-----ccCCCHHHHHH
Confidence            233457 6776666555444332   489999999999998742111 11111  112222320     23789999999


Q ss_pred             HHHHHhhCCCCCc-eEEecCCCccC
Q 020254          237 LIYEALSNPSYRG-VINGTAPNPVR  260 (328)
Q Consensus       237 ~~~~~~~~~~~~g-~~~i~~~~~~~  260 (328)
                      +++.++......| .|++.+|..++
T Consensus       216 ~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          216 LVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHhcCCCCCCcEEEEcCCeecC
Confidence            9999998744344 99998886543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.88  E-value=2.1e-21  Score=162.43  Aligned_cols=221  Identities=15%  Similarity=0.072  Sum_probs=150.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ...++++||||+|+||++++++|+++|++|++++|+........... ....+..+|+.|.++++++++       ++|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34578999999999999999999999999999999987655443221 111244679999988887765       7999


Q ss_pred             EEECCCCCCCC-------CCChhHHHHHHHhhhhhHHHHHHHHhcC-CC-------CCCcEEEEecccceeecCCCcccc
Q 020254           93 VVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-PE-------GVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        93 vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-------~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      +||+||.....       ....+.++..+++|+.++..+++++... ..       +..++|++||...  +...     
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~--~~~~-----  157 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA--FDGQ-----  157 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHCC-----
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh--ccCC-----
Confidence            99999975332       3445778899999999999999988763 11       3457999999876  4321     


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v  231 (328)
                          +....| .+|...+.....++.+   .|+++.+++||.|.++.....   ....  ......|+     ...+..+
T Consensus       158 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~-----~~r~~~~  225 (257)
T 3tpc_A          158 ----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVPF-----PPRLGRA  225 (257)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSSS-----SCSCBCH
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhcCCC-----CCCCCCH
Confidence                233467 7777776665554443   589999999999998753211   1111  11111111     1347899


Q ss_pred             HHHHHHHHHHhhCCCCCc-eEEecCCCccC
Q 020254          232 DDIVNLIYEALSNPSYRG-VINGTAPNPVR  260 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~~~g-~~~i~~~~~~~  260 (328)
                      +|+|++++.++......| ++++.+|..++
T Consensus       226 ~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          226 EEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            999999999998754444 99998886554

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.88  E-value=9.3e-22  Score=165.20  Aligned_cols=220  Identities=16%  Similarity=0.062  Sum_probs=151.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+||||||+|+||+++++.|+++|++|++++|++.+......... ......+|+.|.++++++++       ++|+|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999998755433221110 11244679999998887775       79999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||+||....   .....+.++..+++|+.++.++++++.+.  ..+ ..++|++||...  +..         .+....|
T Consensus        91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y  159 (263)
T 3ak4_A           91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAA--KVG---------APLLAHY  159 (263)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CTTCHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc--ccC---------CCCchhH
Confidence            999997532   23456778899999999999998877652  123 578999999775  322         1234467


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh---H-----HHH--HHHcCCCCCCCCcccccccHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM---I-----PLF--MMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~---~-----~~~--~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                       .+|...+.....+..+   .|++++++|||.++++........   .     ...  ......|+      ..+++++|
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~d  233 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL------GRIEEPED  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTT------CSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCC------CCCcCHHH
Confidence             7777666655544433   489999999999988742111000   0     111  11122222      24789999


Q ss_pred             HHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          234 IVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       234 ~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +|++++.++..+.   .+.+|++.+|..
T Consensus       234 vA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          234 VADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            9999999987542   344999988754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.87  E-value=2e-21  Score=161.49  Aligned_cols=217  Identities=16%  Similarity=0.147  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+... ....    ...........+|+.|.++++++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999998886532 1111    1111111244679999988877765       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  151 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG--AVGN---------PGQ  151 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHCC---------TTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhh--cCCC---------CCC
Confidence            9999999997543   23456778889999999999999988321  145678999999765  3221         234


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....++.   ..|+++.+++||.+.++...... ....  ......|+      ..+.+++|+|++++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~r~~~~~dva~~v~  223 (246)
T 3osu_A          152 ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKE--QMLTQIPL------ARFGQDTDIANTVA  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHH--HHHTTCTT------CSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence            567 778776666655544   34899999999999988543221 1111  22233333      23678999999999


Q ss_pred             HHhhCCC---CCceEEecCCC
Q 020254          240 EALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~  257 (328)
                      .++....   .+.+|++.+|.
T Consensus       224 ~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          224 FLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHTSGGGTTCCSCEEEESTTS
T ss_pred             HHhCccccCCCCCEEEeCCCc
Confidence            9987543   34599998875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.87  E-value=7.7e-22  Score=164.89  Aligned_cols=221  Identities=12%  Similarity=0.048  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCcc-ccCceeecCChhhHhhc------CCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTR-FFPGVMIAEEPQWRDCI------QGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~d~~~~~~~~~~~------~~~d~v   93 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+....... .... ....+|+.|.+++++++      .++|+|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            457899999999999999999999999999999986543322111 0000 13457999988887766      479999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+..+..+++|+.++.++++++...  ..+.+++|++||...  +...+.       .+...| 
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~~~-------~~~~~Y~  160 (254)
T 2wsb_A           90 VNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSG--TIVNRP-------QFASSYM  160 (254)
T ss_dssp             EECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCSS-------SCBHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchh--ccCCCC-------CcchHHH
Confidence            999997533   22345667889999999977776665321  145679999999876  432211       112457 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      .+|...+.....+..+   .+++++++|||.++++........-... ......++      ..+++++|+|++++.++.
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM------GRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT------SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhC
Confidence            7777766665554433   3899999999999987422111000111 11222222      347899999999999986


Q ss_pred             CCC---CCceEEecCCC
Q 020254          244 NPS---YRGVINGTAPN  257 (328)
Q Consensus       244 ~~~---~~g~~~i~~~~  257 (328)
                      ...   .+.++++.+|.
T Consensus       235 ~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          235 PAASYVTGAILAVDGGY  251 (254)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             cccccccCCEEEECCCE
Confidence            532   34488887764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.87  E-value=1.5e-21  Score=163.78  Aligned_cols=223  Identities=17%  Similarity=0.090  Sum_probs=155.9

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCChhhHhhcC-----
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      .....++++||||+|+||++++++|+++|++|++++|+..+.....    ... .......+|+.|+++++++++     
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3345679999999999999999999999999999999876543221    111 111244679999988877764     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                        ++|++||+||....   .....+.++..+++|+.++..+++++...  ..+..++|++||.....++          .
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~  155 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG----------Y  155 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC----------C
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------C
Confidence              79999999997533   24456778889999999999988887662  1256789999997641111          2


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....++.+   .|+++.+++||.+.++..... .....  ......|++      .+..++|+|+
T Consensus       156 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~------r~~~p~dva~  227 (262)
T 3pk0_A          156 PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIA--SMARSIPAG------ALGTPEDIGH  227 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHH--HHHTTSTTS------SCBCHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHH--HHHhcCCCC------CCcCHHHHHH
Confidence            234567 7787777766665554   589999999999988732111 11111  122222322      2678999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCcc
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      +++.++....   .+.++++.+|..+
T Consensus       228 ~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          228 LAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCcCCEEEECCCeec
Confidence            9999987543   3449999888654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.87  E-value=4.7e-22  Score=165.61  Aligned_cols=218  Identities=17%  Similarity=0.083  Sum_probs=147.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+.......     ........+|+.|.++++++++       +
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999986543322110     1111134578999988887775       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||....   .....+.++..+++|+.++.++++++.+.  +.+.+++|++||.... ++.          +..
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~  154 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGF-TGN----------VGQ  154 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHH-HCC----------TTC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhc-CCC----------CCC
Confidence            9999999997533   23456678889999999997766655321  1456799999997541 332          223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....+..+   .+++++++|||.++++.......... .......+.      ..+++++|+|++++.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~------~~~~~~~dva~~~~~  227 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIK-QKYKEQIPL------GRFGSPEEVANVVLF  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCTT------SSCBCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHH-HHHHhcCCC------CCccCHHHHHHHHHH
Confidence            456 6676666555444332   48999999999999875322111110 011122222      347899999999999


Q ss_pred             HhhCCC---CCceEEecCCC
Q 020254          241 ALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~  257 (328)
                      ++....   .+.+|++.+|.
T Consensus       228 l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          228 LCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCchhhcCCCcEEEeCCCc
Confidence            987532   34489998763

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.87  E-value=3.8e-22  Score=167.93  Aligned_cols=218  Identities=12%  Similarity=0.068  Sum_probs=138.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc--------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~   89 (328)
                      ..|+|+||||+|+||+++++.|+++|++|++++|++........    .........+|+.|.+++++++        .+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999998654332211    0111113457888888877766        57


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +...         +..
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~  161 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG--VVSA---------SVG  161 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------C
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh--ccCC---------CCC
Confidence            8999999997432   23456778889999999999999988321  046789999999876  4321         233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..| .+|...+.....+..+   .+++++++|||.++++......  ...+  ......|      ...+++++|+|+++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~dva~~~  233 (266)
T 1xq1_A          162 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKP------LGRFGEPEEVSSLV  233 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence            567 7777776666554443   4899999999999998532210  0100  0011111      12478999999999


Q ss_pred             HHHhhCCC---CCceEEecCCCc
Q 020254          239 YEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +.++....   .+.++++.+|..
T Consensus       234 ~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          234 AFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             HHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHcCccccCccCcEEEEcCCcc
Confidence            99986532   344899988754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=7.5e-22  Score=165.03  Aligned_cols=223  Identities=12%  Similarity=0.047  Sum_probs=150.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++++||||+|+||++++++|+++|++|++++|++.. ......... ....+|+.|.++++++++       ++|+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45789999999999999999999999999999998765 322111001 245689999888877664       789999


Q ss_pred             ECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +....| .
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~~  151 (256)
T 2d1y_A           83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG--LFAE---------QENAAYNA  151 (256)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSBC---------TTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccc--cCCC---------CCChhHHH
Confidence            999975332   3445677899999999999998877542  145679999999765  3211         223457 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHh
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      +|...+.....+..+   .++++++++||.+.++..   ........ .....   +........+++++|+|++++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  227 (256)
T 2d1y_A          152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV---LEAIALSP-DPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHHHC---------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh---hhcccccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            777666665544433   489999999999876521   11000000 00000   001112235789999999999998


Q ss_pred             hCCC---CCceEEecCCCccCH
Q 020254          243 SNPS---YRGVINGTAPNPVRL  261 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~~~~~  261 (328)
                      ..+.   .+.++++.+|...++
T Consensus       228 s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          228 SEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBC
T ss_pred             CchhcCCCCCEEEECCCccccc
Confidence            7642   344999998875543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.87  E-value=1.4e-21  Score=164.08  Aligned_cols=221  Identities=12%  Similarity=-0.012  Sum_probs=148.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCcccccCC----CCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++|+||||+|+||++++++|+++|++|++++| +.........    ......+..+|+.|.+++.++++       
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            34579999999999999999999999999999999 5433222110    01111244579999888877765       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|+|||+||....   .....+.++..+++|+.++.++++++...  +.+ ..++|++||...  +..         .+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~  153 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE--KIP---------WP  153 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHh--cCC---------CC
Confidence            79999999997532   23455778889999999999888776542  123 579999999765  321         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....+..+   .+++++++|||.++++........-... ......++      ..+++++|+|++
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~  227 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM------GYIGEPEEIAAV  227 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT------SSCBCHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCC------CCCcCHHHHHHH
Confidence            34467 6776666555444332   3899999999999988532110000111 11112222      247899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCc
Q 020254          238 IYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      ++.++....   .+.++++.++..
T Consensus       228 ~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          228 AAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCccccCCCCcEEEEcCCcc
Confidence            999987532   344899988754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.87  E-value=2e-21  Score=162.81  Aligned_cols=212  Identities=12%  Similarity=0.084  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+......... ......+|+.|+++++++++       ++|+|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            45789999999999999999999999999999998755432211100 01134579999998887775       79999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||....   .....+.++..+++|+.++..+.+++    ++  .+..++|++||...  +...         +....
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~~  152 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE--AGRGSIINISSIEG--LAGT---------VACHG  152 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC---------TTBHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEeehhh--cCCC---------CCchh
Confidence            999997533   23456778899999999996655554    44  45679999999876  4321         22345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|...+.....++.+   .|++++++|||.++++... ..          ...+. ......+.+++|+|++++.++
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~----------~~~~~-~~~~~~~~~~~dvA~~v~~l~  220 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV----------PEDIF-QTALGRAAEPVEVSNLVVYLA  220 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS----------CTTCS-CCSSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc----------hhhHH-hCccCCCCCHHHHHHHHHHHh
Confidence            7 6777766665554433   5899999999999987422 00          00000 011134789999999999998


Q ss_pred             hCCC---CCceEEecCCCc
Q 020254          243 SNPS---YRGVINGTAPNP  258 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~~  258 (328)
                      ....   .+.+|++.+|..
T Consensus       221 s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          221 SDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CccccCCcCCEEEECCCee
Confidence            7532   344999988854

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.87  E-value=1.5e-21  Score=165.53  Aligned_cols=226  Identities=12%  Similarity=0.077  Sum_probs=155.1

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc------------c----cCCCCCccccCceeecCChhh
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------------L----IFPGKKTRFFPGVMIAEEPQW   83 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~----~~~~~~~~~~~~~d~~~~~~~   83 (328)
                      ....++++||||+|+||++++++|+++|++|++++|++....            .    .........+..+|+.|.+++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            345679999999999999999999999999999999743210            0    000111112345799999888


Q ss_pred             HhhcC-------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecC
Q 020254           84 RDCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGT  151 (328)
Q Consensus        84 ~~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~  151 (328)
                      +++++       ++|++||+||....   .+...+.++..+++|+.++.++++++...  +.+..++|++||...  +..
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~  164 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG--HSA  164 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--GSC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh--cCC
Confidence            77764       79999999997543   34566788899999999999999886431  135578999999876  432


Q ss_pred             CCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHH--------H-HHHc
Q 020254          152 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPL--------F-MMFA  215 (328)
Q Consensus       152 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~--------~-~~~~  215 (328)
                      .         +....| .+|...+.....++.+   .|+++.+++||.|+++.....   ..+.+.        . ....
T Consensus       165 ~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (281)
T 3s55_A          165 N---------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA  235 (281)
T ss_dssp             C---------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH
T ss_pred             C---------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH
Confidence            1         233467 7787777766665554   489999999999999854211   001000        0 0000


Q ss_pred             CCCCCCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          216 GGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       216 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                          ........+.+++|+|++++.++....   .+.++++.+|...+
T Consensus       236 ----~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          236 ----SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             ----HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             ----hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence                001122558999999999999987643   34499999886544

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.87  E-value=8.9e-21  Score=157.93  Aligned_cols=220  Identities=16%  Similarity=0.028  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|+++||||+|+||+++++.|+++|++|++++|+......  .    .....+|+.|+++++++++       ++|+||
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~--~----~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY--P----FATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCC--S----SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcC--C----ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45789999999999999999999999999999998653111  0    1244579999988887764       799999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+....| .
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  148 (250)
T 2fwm_X           80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAA--HTP---------RIGMSAYGA  148 (250)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC---------CTTCHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhh--CCC---------CCCCchHHH
Confidence            99997432   23456788999999999999998888321  035679999999876  432         1233457 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHH-HHcC--CCCCCCCcccccccHHHHHHHHHHHh
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAG--GPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      +|...+.....+..+   .+++++++|||.++++.......--.... ....  ...........+.+++|+|++++.++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  228 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence            777766665554433   48999999999999875321100000000 0000  00000011123789999999999998


Q ss_pred             hCCC---CCceEEecCCCc
Q 020254          243 SNPS---YRGVINGTAPNP  258 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~~  258 (328)
                      ..+.   .+.++++.+|..
T Consensus       229 s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          229 SDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCCCCEEEECCCcc
Confidence            7642   344888888753

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.87  E-value=9.3e-22  Score=164.10  Aligned_cols=220  Identities=15%  Similarity=0.074  Sum_probs=147.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++........   ......+..+|+.|.++++++++       ++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999998654322110   00111244579999888877764       589


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-CcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+||....   .....+.++..+++|+.++..+.+++...  ..+. +++|++||...  +...         +...
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~  153 (251)
T 1zk4_A           85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG--FVGD---------PSLG  153 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG--TSCC---------TTCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchh--ccCC---------CCCc
Confidence            99999997532   23456677889999999877666654321  1455 68999999876  4322         2334


Q ss_pred             ch-HHHHHHHHHHHHhcc-----cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...+.....+..     ..+++++++|||.++++.......  ........    .......+++++|+|++++
T Consensus       154 ~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~dva~~~~  227 (251)
T 1zk4_A          154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQR----TKTPMGHIGEPNDIAYICV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTST----TTCTTSSCBCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc--hhhhHHHh----hcCCCCCCcCHHHHHHHHH
Confidence            57 677666655544332     458999999999999874211110  01110000    1111234789999999999


Q ss_pred             HHhhCCC---CCceEEecCCCc
Q 020254          240 EALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~  258 (328)
                      .++..+.   .+.++++.+|..
T Consensus       228 ~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          228 YLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHcCcccccccCcEEEECCCcc
Confidence            9987542   344899988753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.87  E-value=1.6e-21  Score=162.93  Aligned_cols=222  Identities=17%  Similarity=0.090  Sum_probs=155.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ...++++||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.++++++++       +
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            345799999999999999999999999999999998765433211    11111244679999888877664       7


Q ss_pred             CcEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|++||+||.....  ....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+...
T Consensus        90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~  158 (256)
T 3gaf_A           90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG--ENT---------NVRMA  158 (256)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TCC---------CTTCH
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH--cCC---------CCCch
Confidence            99999999975432  3456788899999999999999987431  145678999999876  332         12335


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|...+.....+..+   .++++.+++||.+.++.....  ..+. . ......|+      ..+.+++|+|++++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~------~r~~~~~dva~~~~  230 (256)
T 3gaf_A          159 SYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV--LTPEIERAMLKHTPL------GRLGEAQDIANAAL  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH--CCHHHHHHHHTTCTT------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc--cCHHHHHHHHhcCCC------CCCCCHHHHHHHHH
Confidence            67 7787777666555543   489999999999987632110  0011 1 12222232      23689999999999


Q ss_pred             HHhhCCC---CCceEEecCCCccCH
Q 020254          240 EALSNPS---YRGVINGTAPNPVRL  261 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~~~  261 (328)
                      .++....   .+.++++.+|...++
T Consensus       231 ~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          231 FLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             HHcCCcccCccCCEEEECCCccccC
Confidence            9987533   345999999876654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.87  E-value=6.3e-22  Score=167.34  Aligned_cols=219  Identities=19%  Similarity=0.036  Sum_probs=150.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.|+|+||||+|+||++++++|+++|++|++++| ++.......    .......+..+|+.|+++++++++       
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34578999999999999999999999999999999 433222111    001111244579999988887775       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceee-cCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYY-GTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~y-g~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||....   .....+.++..+++|+.++.++++++.+. +.+ +++|++||...  + ...         +.
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~--~~~~~---------~~  166 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAA--VMTGI---------PN  166 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGG--TCCSC---------CS
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHh--ccCCC---------CC
Confidence            79999999997532   13456677889999999999999988762 113 68999999876  4 321         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-h--------hhH-HHH--HHHcCCCCCCCCcccc
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A--------KMI-PLF--MMFAGGPLGSGQQWFS  227 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~--------~~~-~~~--~~~~~~~~~~~~~~~~  227 (328)
                      ...| .+|...+.....+..+   .+++++++|||.++++..... .        .+. ...  ....+.+      ...
T Consensus       167 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  240 (274)
T 1ja9_A          167 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP------LKR  240 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST------TSS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCC------CCC
Confidence            3457 7777777666555443   389999999999987632100 0        000 111  1112222      235


Q ss_pred             cccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          228 WIHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       228 ~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++++|+|++++.++..+.   .+.+|++.+|.
T Consensus       241 ~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          241 IGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            7999999999999997543   34499998763

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.87  E-value=5.1e-22  Score=165.89  Aligned_cols=217  Identities=20%  Similarity=0.154  Sum_probs=128.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.++||||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.++++++++       +
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            346789999999999999999999999999999998765433221    11111244679999988877764       7


Q ss_pred             CcEEEECCCCCCC------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      +|+|||+||....      .....+.++..+++|+.++..+.+++...  ..+..++|++||...  |.           
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~-----------  153 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAA--WL-----------  153 (253)
T ss_dssp             CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccc--cC-----------
Confidence            9999999997321      23456778899999999966665554321  045678999999876  42           


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh--hhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                       ..+.| .+|...+.....+..+   .++++.+++||.++++......  .+..  ....+.+      ...+..++|+|
T Consensus       154 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva  224 (253)
T 3qiv_A          154 -YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD--DIVKGLP------LSRMGTPDDLV  224 (253)
T ss_dssp             -------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------------CCHHH
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH--HHhccCC------CCCCCCHHHHH
Confidence             12346 6677666666555444   3899999999999988532110  0000  1111111      22356789999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCCcc
Q 020254          236 NLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++++.++....   .+.+|++.+|..+
T Consensus       225 ~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          225 GMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC------
T ss_pred             HHHHHHcCccccCCCCCEEEECCCeec
Confidence            99999987543   3459999888654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.87  E-value=3e-21  Score=164.14  Aligned_cols=220  Identities=18%  Similarity=0.089  Sum_probs=153.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC-CccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK-KTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++||||||+|+||+++++.|+++|++|++++|+..+......    .. .......+|+.|.++++++++       
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            345799999999999999999999999999999998766433221    11 111244679999888776653       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||.....++          .+.
T Consensus       119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~----------~~~  188 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG----------YPG  188 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB----------CTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC----------CCC
Confidence            78999999997533   24466788899999999999999988421  0456799999997641122          123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ...| .+|...+.....++.+   .|+++.+++||.|+++....   .... . ......|++      .+..++|+|++
T Consensus       189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~~------r~~~p~dvA~~  259 (293)
T 3rih_A          189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD---MGEEYISGMARSIPMG------MLGSPVDIGHL  259 (293)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH---TCHHHHHHHHTTSTTS------SCBCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh---ccHHHHHHHHhcCCCC------CCCCHHHHHHH
Confidence            3467 7777776666555443   48999999999999874211   1111 1 222233332      25689999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCcc
Q 020254          238 IYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++.++....   .+.++++.+|..+
T Consensus       260 v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          260 AAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHhCccccCCCCCEEEECCCccC
Confidence            999986543   3449999888654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.87  E-value=1.1e-21  Score=164.41  Aligned_cols=225  Identities=16%  Similarity=0.054  Sum_probs=152.0

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.|+|+||||+  |+||+++++.|+++|++|++++|++..   ..++...........+|+.|+++++++++       +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999  999999999999999999999998641   11111100001245679999988877764       7


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|+|||+||....       .....+.++..+++|+.++.++++++.+......++|++||...  +..         .+
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  155 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS--EKV---------VP  155 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG--TSB---------CT
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccc--cCC---------CC
Confidence            8999999997431       13456778899999999999999999873111358999999765  321         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....++.+   .++++++++||.++++........-... ......|+      ..+.+++|+|++
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~  229 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL------RRNITQEEVGNL  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence            23457 7777776666554443   3899999999999987532211111111 11112232      236789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccCHHH
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVRLAE  263 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~~~e  263 (328)
                      ++.++....   .+.+|++.+|..++..|
T Consensus       230 v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          230 GLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            999986532   34489998886554333

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.87  E-value=1.9e-21  Score=162.66  Aligned_cols=220  Identities=15%  Similarity=0.086  Sum_probs=153.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.+++|||||+|+||++++++|+++|++|++++|+..+.....    ..........+|+.|.++++++++       ++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999876543321    111112244679999988877764       78


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||....   .....+.++..+++|+.++..+++++.+.   +.+..++|++||...  +...         +..
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  153 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYA--WDAG---------PGV  153 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGG--GSCC---------TTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhh--ccCC---------CCc
Confidence            999999996433   23456778899999999999999887431   134678999999875  3321         223


Q ss_pred             Cch-HHHHHHHHHHHHhcc----cCCCeEEEEEeceEEcCCCcch----hhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ..| .+|...+.....++.    ..|+++.+++||.+.++.....    ..+..  ......|+      ..+..++|+|
T Consensus       154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~p~------~r~~~pedvA  225 (257)
T 3imf_A          154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK--RTIQSVPL------GRLGTPEEIA  225 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSH--HHHTTSTT------CSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHH--HHHhcCCC------CCCcCHHHHH
Confidence            457 677766665554443    2489999999999998753211    01111  11122222      2378999999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCCccC
Q 020254          236 NLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++++.++....   .+.++++.+|..++
T Consensus       226 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          226 GLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHcCchhcCccCCEEEECCCcccC
Confidence            99999987643   34499998887554

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.86  E-value=3.4e-21  Score=161.45  Aligned_cols=222  Identities=12%  Similarity=0.037  Sum_probs=152.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc--------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~   89 (328)
                      +.|+|+||||+|+||++++++|+++|++|++++|++........    .........+|+.|++++++++        .+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998754332211    0111123457999988887776        47


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||....   .....+.++..+++|+.++.++++++...  +.+.+++|++||...  +..         .+..
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  156 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG--ALA---------VPYE  156 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG--TSC---------CTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccC---------CCCc
Confidence            9999999997532   23456778889999999999998888431  145679999999875  332         1233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ..| .+|...+.....+..+   .++++++++||.+.++.....   ......+ ......|+      ..+.+++|+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~  230 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL------RRMGEPKELAA  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT------CSCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            467 7787777666655544   389999999999987631110   0011101 11122222      24789999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCccC
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      +++.++....   .+.++++.+|...+
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          231 MVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHcCccccCCCCCEEEECCCcccc
Confidence            9999986532   34489998876443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=5.9e-21  Score=159.06  Aligned_cols=212  Identities=17%  Similarity=0.125  Sum_probs=142.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC---------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---------~~   90 (328)
                      +++|+||||+|+||++++++|+++|  ++|++++|+......+... .....+..+|+.|.++++++++         ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            4789999999999999999999999  9999999987655433221 1111244679999888887775         79


Q ss_pred             cEEEECCCCCC-C---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC------C-----CCcEEEEecccceeecCCC
Q 020254           91 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE------G-----VRPSVLVSATALGYYGTSE  153 (328)
Q Consensus        91 d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~------~-----~~~~v~~Ss~~v~~yg~~~  153 (328)
                      |+|||+||... .   .....+..+..+++|+.++.++++++...  ..      +     ..++|++||...  +....
T Consensus        83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~~  160 (250)
T 1yo6_A           83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG--SITDN  160 (250)
T ss_dssp             CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG--CSTTC
T ss_pred             cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc--ccCCc
Confidence            99999999753 1   23456778889999999999998887652  01      3     678999999875  33221


Q ss_pred             cccccCCCCCCCch-HHHHHHHHHHHHhcccC---CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccc
Q 020254          154 TEVFDESSPSGNDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       154 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (328)
                      ..  ....++...| .+|...+.....++.+.   +++++++|||.+.++....                      ..++
T Consensus       161 ~~--~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------~~~~  216 (250)
T 1yo6_A          161 TS--GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------NAAL  216 (250)
T ss_dssp             CS--TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             cc--ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------CCCC
Confidence            10  0111233457 77777776665555443   8999999999987764210                      1358


Q ss_pred             cHHHHHHHHHHHhhCCC--CCceEEecCCCccC
Q 020254          230 HLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  260 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~--~~g~~~i~~~~~~~  260 (328)
                      +++|+|+.++.++..+.  ..|.|...++..++
T Consensus       217 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          217 TVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             --HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             CHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence            89999999999998765  35655544444343

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=4.4e-21  Score=159.46  Aligned_cols=219  Identities=10%  Similarity=-0.039  Sum_probs=149.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc---CCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vi~~a~   98 (328)
                      +.|+|+||||+|+||+++++.|+++|++|++++|++.+..... .........+|+.|++++++++   .++|+|||+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4578999999999999999999999999999999876544333 1111124457999988887664   47999999999


Q ss_pred             CCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHH
Q 020254           99 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC  172 (328)
Q Consensus        99 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~  172 (328)
                      .....   ....+.++..+++|+.++.++++++...  ..+..++|++||...  +...+        +....| .+|..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~--------~~~~~Y~~sK~a  153 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SVKGV--------VNRCVYSTTKAA  153 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TTBCC--------TTBHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHh--CcCCC--------CCCccHHHHHHH
Confidence            75332   2345778889999999999998887531  135678999999765  32111        123457 77777


Q ss_pred             HHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhh---hHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          173 REWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAK---MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       173 ~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~---~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+.....+..+   .+++++++|||.++++.... ...   .-... ......+.      ..+.+++|+|++++.++..
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~v~~l~s~  227 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT------GRFATAEEIAMLCVYLASD  227 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT------SSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhCc
Confidence            66665555433   48999999999999874211 000   00111 11122222      2368999999999999865


Q ss_pred             CC---CCceEEecCCC
Q 020254          245 PS---YRGVINGTAPN  257 (328)
Q Consensus       245 ~~---~~g~~~i~~~~  257 (328)
                      +.   .+.++++.+|.
T Consensus       228 ~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          228 ESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             GGTTCCSCEEEECTTG
T ss_pred             cccCCCCCEEEECCCc
Confidence            33   34488887764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.86  E-value=1.9e-21  Score=164.42  Aligned_cols=220  Identities=15%  Similarity=0.141  Sum_probs=149.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.++|+||||+|+||+++++.|+++|++|++++|++........    .........+|+.|.++++++++       +
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            345789999999999999999999999999999998754332211    01111234579999888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC----CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|+|||+||....   .....+.++..+++|+.++.++++++.+.    +.+..++|++||...  +..         .+
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~  168 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG--KQG---------VV  168 (277)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGG--TSC---------CT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccc--ccC---------CC
Confidence            9999999997533   23456678899999999999999988762    014578999999865  321         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh-hH-------HH-H-HHHcCCCCCCCCccccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MI-------PL-F-MMFAGGPLGSGQQWFSW  228 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~-------~~-~-~~~~~~~~~~~~~~~~~  228 (328)
                      ....| .+|...+.....++.+   .+++++++|||.+.++....... ..       .. . ......|+      ..+
T Consensus       169 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~  242 (277)
T 2rhc_B          169 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI------GRY  242 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT------SSC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC------CCC
Confidence            33457 6777666655544432   48999999999998763211100 00       00 1 11111222      247


Q ss_pred             ccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          229 IHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++++|+|++++.++..+.   .+.++++.+|.
T Consensus       243 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          243 VQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            899999999999987542   34489998774

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.86  E-value=3.5e-21  Score=163.06  Aligned_cols=227  Identities=13%  Similarity=0.064  Sum_probs=149.3

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CC-CCccccCceeecCChhhHhhcC-----
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~-~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      ..+.+++|||||+|+||++++++|+++|++|++++|+... .....    .. .....+..+|+.|.++++++++     
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3455789999999999999999999999999999995432 11111    10 1111244679999988877764     


Q ss_pred             --CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                        ++|++||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~  170 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHG--LVA---------S  170 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------C
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccc--ccC---------C
Confidence              789999999975432   3456778899999999999999987431  135578999999875  322         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHc----CCCCCCCCcccccccHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFA----GGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~i~v~  232 (328)
                      +....| .+|...+.....++.+   .|+++.+++||.+.++..... ...........    ...+........+++++
T Consensus       171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e  250 (281)
T 3v2h_A          171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE  250 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH
Confidence            233467 7787777666555443   489999999999998743211 00000000000    00012223345689999


Q ss_pred             HHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          233 DIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       233 D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      |+|++++.++....   .+.++++.+|.
T Consensus       251 dvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          251 QVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             HHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            99999999987654   34499998874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.86  E-value=8.5e-21  Score=159.30  Aligned_cols=216  Identities=16%  Similarity=0.041  Sum_probs=151.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      .+.++|+||||+|+||++++++|+++|++|++++|+........       ...+|+.|.+.++++++       ++|++
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------HLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-------ECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-------ccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            44578999999999999999999999999999999876543321       23578988887765553       79999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+....| 
T Consensus        99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~  167 (266)
T 3uxy_A           99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG--LRP---------GPGHALYC  167 (266)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TBC---------CTTBHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh--CCC---------CCCChHHH
Confidence            999997543   23456778899999999999999988321  045678999999765  321         1233457 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-h--hhH--HH-HHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A--KMI--PL-FMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~--~~~--~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      .+|...+.....++.+   .|+++.+++||.+.++..... .  ...  .. .......|      ...+.+++|+|+++
T Consensus       168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v  241 (266)
T 3uxy_A          168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP------LGRIAEPEDIADVV  241 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST------TSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence            7777777666555443   389999999999987631100 0  000  00 11112222      23478999999999


Q ss_pred             HHHhhCCC---CCceEEecCCCccC
Q 020254          239 YEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      +.++....   .+.++++.+|..++
T Consensus       242 ~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          242 LFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHhCchhcCCcCCEEEECcCEeCC
Confidence            99987643   34499998886543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.86  E-value=3.4e-21  Score=161.03  Aligned_cols=219  Identities=14%  Similarity=0.021  Sum_probs=147.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      .++++||||+|+||++++++|+++|++|++++|+....  ..+...........+|+.|+++++++++       ++|+|
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDIL   83 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999987521  1111111111234579999998887775       89999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||.....   ....+.++..+++|+.++..+.+++    ++  .+..++|++||...  +...         +....
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~~  150 (255)
T 2q2v_A           84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA--RNWGRIINIASVHG--LVGS---------TGKAA  150 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSCC---------TTBHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcCchh--ccCC---------CCchh
Confidence            9999975332   3456778899999999776665554    45  46679999999876  4321         22345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--------HHHcCCCCCCCCcccccccHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--------MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      | .+|...+.....+..+   .+++++++|||.++++............        .....    .......+++++|+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~dv  226 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLA----EKQPSLAFVTPEHL  226 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHT----TTCTTCCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHh----ccCCCCCCcCHHHH
Confidence            7 7777666665555443   4899999999999987421110000000        11101    11112348999999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCCc
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      |++++.++..+.   .+.+|++.+|..
T Consensus       227 A~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          227 GELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            999999987543   244899988753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=7.2e-22  Score=168.55  Aligned_cols=236  Identities=16%  Similarity=0.085  Sum_probs=157.6

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCC---ccccCceeecCChhhHhhcC--
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKK---TRFFPGVMIAEEPQWRDCIQ--   88 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~---~~~~~~~d~~~~~~~~~~~~--   88 (328)
                      |+..+.|+++||||+|+||+++++.|+++|++|++++|+..+......    ...   ......+|+.|+++++++++  
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            333456789999999999999999999999999999998754332211    000   11244579999988877764  


Q ss_pred             -----CCcEEEECCCCCCCC-----CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc
Q 020254           89 -----GSTAVVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        89 -----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                           ++|+|||+||.....     ....+.++..+++|+.++.++++++...  +.+ .++|++||...  +...    
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~--~~~~----  173 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVA--GPQA----  173 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGG--SSSC----
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchh--ccCC----
Confidence                 799999999974322     3456778899999999999998887652  123 78999999876  4321    


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch---hh----hHHHHHH-HcCCCCCCCCc
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AK----MIPLFMM-FAGGPLGSGQQ  224 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~---~~----~~~~~~~-~~~~~~~~~~~  224 (328)
                          .+....| .+|...+.....++.   ..|++++++|||.+.++.....   ..    ....... ....|      
T Consensus       174 ----~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p------  243 (297)
T 1xhl_A          174 ----HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP------  243 (297)
T ss_dssp             ----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT------
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC------
Confidence                1233457 777776666555443   2589999999999988732111   00    0001111 11111      


Q ss_pred             ccccccHHHHHHHHHHHhhCC---C-CCceEEecCCCccCHHHHHHHHHH
Q 020254          225 WFSWIHLDDIVNLIYEALSNP---S-YRGVINGTAPNPVRLAEMCDHLGN  270 (328)
Q Consensus       225 ~~~~i~v~D~a~~~~~~~~~~---~-~~g~~~i~~~~~~~~~e~~~~i~~  270 (328)
                      ...+..++|+|++++.++..+   . .+.++++.+|......+....+.+
T Consensus       244 ~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          244 VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence            124789999999999998654   2 344999988876665554444443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.86  E-value=1.9e-21  Score=163.43  Aligned_cols=222  Identities=14%  Similarity=0.050  Sum_probs=151.4

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++|+||||+  |+||+++++.|+++|++|++++|++...   ..+........+..+|+.|+++++++++       +
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999  9999999999999999999999987211   1110000001245679999988877664       6


Q ss_pred             CcEEEECCCCCCC----C---C-CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIG----T---R-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~---~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      +|+|||+||....    .   . ...+.++..+++|+.++.++++++.+......++|++||...  +..         .
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~  156 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ERA---------I  156 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------C
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh--ccC---------C
Confidence            8999999997531    1   1 456778899999999999999999873112358999999765  321         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....++.+   .++++++++||.+.++........-... ......|+      ..+.+++|+|+
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~  230 (265)
T 1qsg_A          157 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIEDVGN  230 (265)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            233467 7777777666555443   4899999999999988532211111111 11112232      23679999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCccC
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      +++.++....   .+.++++.+|..++
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          231 SAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHhCchhcCccCCEEEECCCcCCC
Confidence            9999986533   34489998886443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.86  E-value=1.5e-21  Score=163.71  Aligned_cols=219  Identities=15%  Similarity=0.043  Sum_probs=145.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------~   89 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+.......      ........+|+.|+++++++++      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999987543322110      0011244579999998887775      5


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||....   .....+.++..+++|+.++..+.+++...  +.+.+++|++||...  +...         +..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  154 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL--LRPW---------QDL  154 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------TTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh--cCCC---------CCC
Confidence            9999999996433   23456778899999999996666655421  145679999999876  4321         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-------hhHHH--H-HHHcCCCCCCCCccccccc
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-------KMIPL--F-MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-------~~~~~--~-~~~~~~~~~~~~~~~~~i~  230 (328)
                      ..| .+|...+.....+..+   .|++++++|||.++++......       .....  . ......|      ...+.+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~  228 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIP------MGRVGK  228 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCT------TSSCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCC------CCCccC
Confidence            456 6666655555444332   4899999999999988532100       00000  0 0001111      123679


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++|+|++++.++....   .+.++++.+|.
T Consensus       229 ~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          229 PEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999999987532   34488887764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.86  E-value=4.2e-21  Score=160.56  Aligned_cols=221  Identities=12%  Similarity=0.035  Sum_probs=153.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.+++|||||+|+||++++++|+++|++|+++ +|+........    ..........+|+.|.++++++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999987 67654432221    111111244679999988877664       6


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~  151 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS--IRY---------LENY  151 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG--TSB---------CTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh--CCC---------CCCc
Confidence            7999999996433   23456778889999999999998887432  145678999999876  331         1233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....++.+   .++++.+++||.+.++........-... ......|+      ..+.+++|+|++++
T Consensus       152 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva~~v~  225 (258)
T 3oid_A          152 TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA------GRMVEIKDMVDTVE  225 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC------CCCcCHHHHHHHHH
Confidence            567 7787777776665554   3899999999999887432211111111 11222232      23689999999999


Q ss_pred             HHhhCCC---CCceEEecCCCcc
Q 020254          240 EALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      .++....   .+.++++.+|...
T Consensus       226 ~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          226 FLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHTSSTTTTCCSCEEEESTTGGG
T ss_pred             HHhCcccCCccCCEEEECCCccC
Confidence            9987654   3449999888644

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.86  E-value=1.7e-21  Score=163.32  Aligned_cols=222  Identities=14%  Similarity=0.103  Sum_probs=151.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|+..+......    .........+|+.|.++++++++       ++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998754332211    11111134578888888776664       79


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |+|||+||....    .....+.++..+++|+.++.++++++...  +.+.+++|++||...  |...         +..
T Consensus        93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  161 (260)
T 2zat_A           93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGA--YHPF---------PNL  161 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSCC---------TTB
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhh--cCCC---------CCc
Confidence            999999996421    23456778899999999998888876531  145679999999876  5422         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....+..+   .++++++++||.+.++.......--... ......++      ..+.+++|+|++++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~v~  235 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRI------RRLGNPEDCAGIVS  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTC------SSCBCGGGGHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCC------CCCCCHHHHHHHHH
Confidence            457 6777666665554433   4899999999999887532110000000 01111121      24789999999999


Q ss_pred             HHhhCCC---CCceEEecCCCccC
Q 020254          240 EALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      .++..+.   .+.++++.+|...+
T Consensus       236 ~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          236 FLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHcCcccCCccCCEEEECCCcccc
Confidence            9987543   34499999987665

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.86  E-value=1.4e-20  Score=157.90  Aligned_cols=212  Identities=12%  Similarity=-0.014  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|+||||||+|+||+++++.|+++|++|++++|++....    .   .....+|+.|.++++++++       ++|+||
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~---~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEA----K---YDHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSC----S---SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCC----c---eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999876511    1   1144679999988877764       799999


Q ss_pred             ECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||.....   ....+.+...+++|+.++..+++++...  +.+..++|++||...  +...         +....| .
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~~  148 (264)
T 2dtx_A           80 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA--SIIT---------KNASAYVT  148 (264)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG--TSCC---------TTBHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh--ccCC---------CCchhHHH
Confidence            999975332   3456788899999999988888877642  145679999999876  4321         223457 7


Q ss_pred             HHHHHHHHHHHhcccCC--CeEEEEEeceEEcCCCcchhh-----hH----HHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          169 AEVCREWEGTALKVNKD--VRLALIRIGIVLGKDGGALAK-----MI----PLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~--~~~~ilRp~~v~g~~~~~~~~-----~~----~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +|...+.....+..+.+  +++++++||.+.++.......     .-    ... ......|.      ..+++++|+|+
T Consensus       149 sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA~  222 (264)
T 2dtx_A          149 SKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM------QRIGKPQEVAS  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTT------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCC------CCCcCHHHHHH
Confidence            77777666655544322  899999999997653111100     00    111 11111121      23789999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCC
Q 020254          237 LIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++.++....   .+.++++.++.
T Consensus       223 ~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          223 AVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCCCCcEEEECCCc
Confidence            9999987542   34488888774

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.86  E-value=4.7e-21  Score=160.40  Aligned_cols=214  Identities=13%  Similarity=0.039  Sum_probs=140.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC----CCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~   98 (328)
                      ||+|+||||+|+||+++++.|+++|++|++++|+..+...         ...+|+.|.++++++++    ++|+|||+||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag   71 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAG   71 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------ccccCCCCHHHHHHHHHHhCCCCCEEEECCC
Confidence            4689999999999999999999999999999998765432         13479999998888875    4599999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc-----cc------------C
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV-----FD------------E  159 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~-----~~------------e  159 (328)
                      ....    ...++..+++|+.++.++++++...  +.+..++|++||...  +......+     ..            +
T Consensus        72 ~~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (257)
T 1fjh_A           72 LGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS--AHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             CCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             CCCC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh--hccccccchhhhhhcccchhhhhhhhhc
Confidence            7421    1237889999999999999888632  145679999999887  52111000     00            0


Q ss_pred             CCC--CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hh-hHHHHHHHcCCCCCCCCcccccccH
Q 020254          160 SSP--SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       160 ~~~--~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~v  231 (328)
                      ..+  ....| .+|...+.....++.+   .++++++++||.+.++..... .. ...  .....  +  ......+.++
T Consensus       146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~--~--~~~~~~~~~~  219 (257)
T 1fjh_A          146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG--ESIAK--F--VPPMGRRAEP  219 (257)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------C--CCSTTSCCCT
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHH--HHHHh--c--ccccCCCCCH
Confidence            011  22356 6677666666555443   589999999999988753211 00 000  00000  0  0111247899


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +|+|++++.++..+.  ..| .+++.+|.
T Consensus       220 ~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          220 SEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            999999999987642  334 88887774

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.86  E-value=2e-21  Score=163.31  Aligned_cols=219  Identities=13%  Similarity=0.075  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----C-CCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ++++++||||+|+||++++++|+++|++|++++|+........    . ......+..+|+.|.++++++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999988765422111    0 00111244679999988887764       7


Q ss_pred             CcEEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCC
Q 020254           90 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        90 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      +|+|||+||....     .....+.++..+++|+.++..+++++    ++  .+..++|++||.+.  ++...       
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~g~iv~iss~~~--~~~~~-------  154 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK--QNFGRIINYGFQGA--DSAPG-------  154 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTTG--GGCCC-------
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh--cCCCeEEEEeechh--cccCC-------
Confidence            9999999994211     23456778899999999999999988    44  45678999998855  32111       


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HH-HcCCCCCCCCcccccccHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MM-FAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      .+....| .+|...+.....++.+   .++++.+++||.++++....   ..... .. ....|      ...+.+++|+
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~p------~~r~~~~~dv  225 (264)
T 3i4f_A          155 WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA---TIQEARQLKEHNTP------IGRSGTGEDI  225 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC---CHHHHHHC--------------CCCCHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh---ccHHHHHHHhhcCC------CCCCcCHHHH
Confidence            1233567 7777776666555443   58999999999999885322   11111 11 11112      1236899999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      |++++.++....   .+.++++.+|-...
T Consensus       226 a~~v~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          226 ARTISFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHHHHHcCcccCCCCCcEEEEcCceeec
Confidence            999999987643   34499998886543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.86  E-value=8.6e-21  Score=159.27  Aligned_cols=206  Identities=15%  Similarity=0.147  Sum_probs=144.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      .+.+++|||||+|+||+++++.|+++|++|++++|+..........  ......+|+.|.++++++++       ++|++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--NTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT--TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC--CceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4457899999999999999999999999999999987654443321  11244679999988877764       78999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+....| 
T Consensus        92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~~~~~~Y~  160 (266)
T 3p19_A           92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG--KKT---------FPDHAAYC  160 (266)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC---------CTTCHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--CCC---------CCCCchHH
Confidence            999997533   23456778889999999999977766421  146679999999876  432         1233457 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh--hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      .+|...+.....+..+   .|+++.+++||.|.++......  .....+... ..++      ..+++++|+|++++.++
T Consensus       161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~------~r~~~pedvA~av~~l~  233 (266)
T 3p19_A          161 GTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVDM------GGVLAADDVARAVLFAY  233 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHHT------TCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-cccc------cCCCCHHHHHHHHHHHH
Confidence            7777766665554443   4899999999999887432111  111111100 0011      23689999999999999


Q ss_pred             hCCC
Q 020254          243 SNPS  246 (328)
Q Consensus       243 ~~~~  246 (328)
                      ..+.
T Consensus       234 ~~~~  237 (266)
T 3p19_A          234 QQPQ  237 (266)
T ss_dssp             HSCT
T ss_pred             cCCC
Confidence            9876

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.86  E-value=1.2e-20  Score=158.69  Aligned_cols=220  Identities=14%  Similarity=0.128  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..++|+||||+|+||++++++|+++|++|++++|+..+....... .....+..+|+.|.++++++++       ++|+|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            457899999999999999999999999999999987654432111 0111244679999988887775       89999


Q ss_pred             EECCCCCCCC---------CCChhHHHHHHHhhhhhHHHHHHHHhcC--CC------CCCcEEEEecccceeecCCCccc
Q 020254           94 VNLAGTPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINES--PE------GVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        94 i~~a~~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~------~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                      ||+||.....         ....+.+...+++|+.++.++++++...  +.      +..++|++||...  +...    
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~----  164 (265)
T 2o23_A           91 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--FEGQ----  164 (265)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHCC----
T ss_pred             EECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh--cCCC----
Confidence            9999975332         1456678899999999999999988752  12      4568999999876  4321    


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh-hHHHHHHHcCCCCCCCCcccccccH
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v  231 (328)
                           +....| .+|...+.....+..+   .++++++++||.+.++....... ...  ......|.     ...++++
T Consensus       165 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~  232 (265)
T 2o23_A          165 -----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVPF-----PSRLGDP  232 (265)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C--HHHHTCSS-----SCSCBCH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHH--HHHHcCCC-----cCCCCCH
Confidence                 223457 6776665555444332   48999999999998874321110 000  11111222     0236899


Q ss_pred             HHHHHHHHHHhhCCCCCc-eEEecCCCcc
Q 020254          232 DDIVNLIYEALSNPSYRG-VINGTAPNPV  259 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~~~g-~~~i~~~~~~  259 (328)
                      +|+|++++.++......| ++++.+|..+
T Consensus       233 ~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          233 AEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            999999999998655444 8888887544

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.86  E-value=1.1e-21  Score=163.10  Aligned_cols=214  Identities=15%  Similarity=0.143  Sum_probs=143.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCcccc-CceeecCChhhHhhc-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFF-PGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~-~~~d~~~~~~~~~~~-------~~   89 (328)
                      +++|+||||+|+||++++++|+++|++|+++ +|++........    ....... ..+|+.|.+++++++       .+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999998 777554332210    0111113 557999988887765       37


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHH----HHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|+|||+||....   .....+.++..+++|+.++.+++    +.+++  .+.+++|++||.... ++.          +
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~~sS~~~~-~~~----------~  147 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK--ARFGRIVNITSVVGI-LGN----------P  147 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTHHH-HCC----------S
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh--cCCCEEEEEeChhhc-cCC----------C
Confidence            9999999997533   23456678889999999955554    44444  466899999997641 332          1


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....+..+   .+++++++|||.++++..... .....  ......+.      ..+++++|+|++
T Consensus       148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~  219 (245)
T 2ph3_A          148 GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKE--AYLKQIPA------GRFGRPEEVAEA  219 (245)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHTCTT------CSCBCHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence            23456 6676665555444332   389999999999987632111 11111  11122222      347899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++.++..+.   .+.+|++.++.
T Consensus       220 ~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          220 VAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCcccccccCCEEEECCCC
Confidence            999987542   24489998764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.86  E-value=4.4e-21  Score=161.38  Aligned_cols=216  Identities=12%  Similarity=0.062  Sum_probs=151.8

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ....++||||||+|+||++++++|+++|++|++++|+........      ....+|+.|.++++++++       ++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS------DHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSS------EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCce------eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            345689999999999999999999999999999999876543211      144689999988877764       7999


Q ss_pred             EEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +||+||.....   ....+.++..+++|+.++..+++++...  ..+..++|++||...  |...         +....|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  153 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS--YAAT---------KNAAAY  153 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSBC---------TTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--ccCC---------CCChhH
Confidence            99999975432   3455777889999999999888876542  135578999999876  4422         223467


Q ss_pred             -HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhh--------h-HHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          168 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAK--------M-IPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~--------~-~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                       .+|...+.....++.+.  ++++.+++||.|.++.......        . -... ......|+      ..+.+++|+
T Consensus       154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedv  227 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM------GRIGRPEEV  227 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT------SSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC------CCCcCHHHH
Confidence             77877777766655443  7999999999998763211000        0 0011 11112222      236789999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCCc
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      |++++.++....   .+.++++.+|..
T Consensus       228 A~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          228 AEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            999999987543   344999988853

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.86  E-value=3.2e-21  Score=160.69  Aligned_cols=206  Identities=13%  Similarity=0.076  Sum_probs=148.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ..|+++|+||||+|+||++++++|+++|++|++++|+..+....        ...+|+.|.++++++++       ++|+
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------SFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE--------EEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc--------ceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            34567999999999999999999999999999999987654321        23467888887776653       5799


Q ss_pred             EEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           93 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        93 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      |||+||....    .....+.++..+++|+.++.++++++........++|++||...  +..         .+....| 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~  159 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA--LNR---------TSGMIAYG  159 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh--ccC---------CCCCchhH
Confidence            9999996432    23345677888999999999999998763112348999999876  321         1233457 


Q ss_pred             HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      .+|...+.....++.+     .++++.+++||.+.++..       ..  ..      .......+++++|+|++++.++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-------~~--~~------~~~~~~~~~~~~dva~~i~~l~  224 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-------RK--YM------SDANFDDWTPLSEVAEKLFEWS  224 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-------HH--HC------TTSCGGGSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-------hh--hc------ccccccccCCHHHHHHHHHHHh
Confidence            7788877777766665     489999999999876521       10  01      1122345789999999999999


Q ss_pred             hC---CCCCc-eEEecCCCcc
Q 020254          243 SN---PSYRG-VINGTAPNPV  259 (328)
Q Consensus       243 ~~---~~~~g-~~~i~~~~~~  259 (328)
                      ..   ....| ++++.+++..
T Consensus       225 ~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          225 TNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HCGGGCCCTTCEEEEEEETTE
T ss_pred             cCccccCCcceEEEEecCCcc
Confidence            87   22344 8888776644

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.86  E-value=7.9e-22  Score=165.22  Aligned_cols=219  Identities=12%  Similarity=0.077  Sum_probs=149.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC-CCcccccCC----CCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...|+|+||||+|+||++++++|+++|++|++++|+ +........    ......+..+|+.|+++++++++       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            345799999999999999999999999999999998 544322211    01111244579999998887775       


Q ss_pred             CCcEEEECCCC-CCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC--C---CcEEEEecccceeecCCCcccc
Q 020254           89 GSTAVVNLAGT-PIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--V---RPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        89 ~~d~vi~~a~~-~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~---~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      ++|+|||+||. ...   .....+.++..+++|+.++.++++++...  +.+  .   .++|++||...  +..      
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~------  156 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG--HTG------  156 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH--HHC------
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh--ccC------
Confidence            79999999996 322   22345667889999999999988876531  011  2   68899988765  431      


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  232 (328)
                        ..+....| .+|...+.....+..+   .+++++++|||.++++..... ..+..  ....+.++      ..+++++
T Consensus       157 --~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~  226 (258)
T 3afn_B          157 --GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD--RISNGIPM------GRFGTAE  226 (258)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH--HHHTTCTT------CSCBCGG
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH--HHhccCCC------CcCCCHH
Confidence              11234467 7777776665554433   389999999999998753221 11111  12222232      3578999


Q ss_pred             HHHHHHHHHhhCCC----CCceEEecCCC
Q 020254          233 DIVNLIYEALSNPS----YRGVINGTAPN  257 (328)
Q Consensus       233 D~a~~~~~~~~~~~----~~g~~~i~~~~  257 (328)
                      |+|++++.++..+.    .+.+|++.++.
T Consensus       227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          227 EMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            99999999987532    24499998875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.86  E-value=1.3e-21  Score=166.46  Aligned_cols=237  Identities=12%  Similarity=0.022  Sum_probs=154.8

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc----------------cCCCCCccccCceeecCChhh
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQW   83 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~~~~~~   83 (328)
                      ..+.++||||||+|+||++++++|+++|++|++++|+......                ............+|+.|.+++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            3456799999999999999999999999999999997322110                000111112445799999888


Q ss_pred             HhhcC-------CCcEEEECCCCCCC-CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcc
Q 020254           84 RDCIQ-------GSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE  155 (328)
Q Consensus        84 ~~~~~-------~~d~vi~~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~  155 (328)
                      +++++       ++|++||+||.... .....+.++..+++|+.++.++++++........++|++||...  +......
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~~~~  164 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG--LIAAAQP  164 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH--HHHHHCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh--ccccccc
Confidence            77664       79999999997532 22456788999999999999999999874334468999999775  4322222


Q ss_pred             cccCCCC--CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH----------HHHcCCCC
Q 020254          156 VFDESSP--SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF----------MMFAGGPL  219 (328)
Q Consensus       156 ~~~e~~~--~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~----------~~~~~~~~  219 (328)
                      +..+..+  ....| .+|...+.....++.+   .|+++.+++||.|.++....... ...+          ......+.
T Consensus       165 ~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T 3pxx_A          165 PGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM-YRQFRPDLEAPSRADALLAFPA  243 (287)
T ss_dssp             C-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH-HHHHCTTSSSCCHHHHHHHGGG
T ss_pred             ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch-hhhhccccccchhHHHHhhhhh
Confidence            2222222  22356 6777776666555444   38999999999999885422100 0000          00000000


Q ss_pred             CCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          220 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       220 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                       .......+.+++|+|++++.++....   .+.++++.+|..++
T Consensus       244 -~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          244 -MQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             -GCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             -hcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence             11112558999999999999986543   34499998886543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.86  E-value=9e-21  Score=155.19  Aligned_cols=205  Identities=15%  Similarity=0.071  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~   98 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+..                +|+.|+++++++++   ++|++||+||
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            4568999999999999999999999999999998753                68888888887774   7899999999


Q ss_pred             CCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHH
Q 020254           99 TPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  173 (328)
Q Consensus        99 ~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~  173 (328)
                      ....    .+...+.++..+++|+.++..+++++.+......++|++||...  +..         .+....| .+|...
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~~Y~asK~a~  137 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS--RKV---------VANTYVKAAINAAI  137 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG--TSC---------CTTCHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh--ccC---------CCCchHHHHHHHHH
Confidence            7521    34556788899999999999999999873112347999999876  432         1233467 778777


Q ss_pred             HHHHHHhcccC-CCeEEEEEeceEEcCCCcch-hhhHHH-H-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCc
Q 020254          174 EWEGTALKVNK-DVRLALIRIGIVLGKDGGAL-AKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  249 (328)
Q Consensus       174 ~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  249 (328)
                      +.....++.+. .+++.+++||.+.++..... ...... . ......|+      ..+.+++|+|++++.++......|
T Consensus       138 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~~~~l~~~~~~tG  211 (223)
T 3uce_A          138 EATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV------GKVGEASDIAMAYLFAIQNSYMTG  211 (223)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT------CSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC------CCccCHHHHHHHHHHHccCCCCCC
Confidence            77666555543 39999999999998742211 111111 1 11222232      236789999999999998655444


Q ss_pred             -eEEecCCCcc
Q 020254          250 -VINGTAPNPV  259 (328)
Q Consensus       250 -~~~i~~~~~~  259 (328)
                       ++++.+|..+
T Consensus       212 ~~i~vdgG~~~  222 (223)
T 3uce_A          212 TVIDVDGGALL  222 (223)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEecCCeec
Confidence             9999887644

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.86  E-value=5.8e-21  Score=159.77  Aligned_cols=218  Identities=14%  Similarity=0.013  Sum_probs=147.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      ..++||||||+|+||+++++.|+++|++|++++|+..+......... ..+..+|+.|.++++++++       ++|+||
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-AVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-CEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-CeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            35689999999999999999999999999999998865322111100 1245679999888877664       689999


Q ss_pred             ECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           95 NLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        95 ~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      |+||.....  ....+.+...+++|+.++..+++++...  ..+..++|++||...  +...         +....| .+
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~as  173 (260)
T 3gem_A          105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVT--RKGS---------SKHIAYCAT  173 (260)
T ss_dssp             ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GTCC---------SSCHHHHHH
T ss_pred             ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh--cCCC---------CCcHhHHHH
Confidence            999975332  2334566789999999999998887542  145678999999876  3321         233467 77


Q ss_pred             HHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          170 EVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       170 k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                      |...+.....++.+.  ++++.+++||.+.++..... ....  ......++      ..+..++|+|++++.++.....
T Consensus       174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-~~~~--~~~~~~p~------~r~~~~edva~~v~~L~~~~~i  244 (260)
T 3gem_A          174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-AYRA--NALAKSAL------GIEPGAEVIYQSLRYLLDSTYV  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS------CCCCCTHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-HHHH--HHHhcCCC------CCCCCHHHHHHHHHHHhhCCCC
Confidence            877766665554432  59999999999987642110 1110  11112222      2256789999999999975554


Q ss_pred             Cc-eEEecCCCccC
Q 020254          248 RG-VINGTAPNPVR  260 (328)
Q Consensus       248 ~g-~~~i~~~~~~~  260 (328)
                      .| ++++.+|..++
T Consensus       245 tG~~i~vdGG~~~~  258 (260)
T 3gem_A          245 TGTTLTVNGGRHVK  258 (260)
T ss_dssp             CSCEEEESTTTTTC
T ss_pred             CCCEEEECCCcccC
Confidence            44 99999887654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.85  E-value=1e-20  Score=159.57  Aligned_cols=220  Identities=14%  Similarity=0.076  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc--------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~   89 (328)
                      ..++++||||+|+||++++++|+++|++|++++|++........    .........+|+.|++++++++        .+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998754332211    0111123457999988887666        57


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +..
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~~---------~~~  168 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG--FSAL---------PSV  168 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG--TSCC---------TTC
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhh--cCCC---------CCc
Confidence            9999999997533   23456778889999999999999887421  135578999999876  5422         233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh----hHHHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK----MIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ..| .+|...+.....+..+   .|+++++++||.++++.......    ..... ......|+      ..+.+++|+|
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA  242 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------GRAGKPQEVS  242 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------CSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC------CCCcCHHHHH
Confidence            457 7777666665544433   48999999999999885321100    00001 11112222      1368999999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCCc
Q 020254          236 NLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      ++++.++....   .+.++++.+|..
T Consensus       243 ~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          243 ALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCcCCCEEEECCCcc
Confidence            99999986532   344888888753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.85  E-value=7.1e-21  Score=161.06  Aligned_cols=224  Identities=15%  Similarity=0.144  Sum_probs=143.0

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCChhhHhhcC----
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      |...+.++++||||+|+||+++++.|+++|++|++++|+... ....    ........+..+|+.|.++++++++    
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            333445789999999999999999999999999999975432 2111    1111111245679999998887765    


Q ss_pred             ---CCcEEEECCCCCC--C---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC---CCcEEEEecccceeecCCCcc
Q 020254           89 ---GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRPSVLVSATALGYYGTSETE  155 (328)
Q Consensus        89 ---~~d~vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~---~~~~v~~Ss~~v~~yg~~~~~  155 (328)
                         ++|++||+||...  .   .....+.++..+++|+.++..+++++...  +.+   ..++|++||...  +..    
T Consensus       104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~----  177 (280)
T 4da9_A          104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSA--VMT----  177 (280)
T ss_dssp             HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------
T ss_pred             HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhh--ccC----
Confidence               7999999999731  1   23456788899999999999888877652  011   458999999775  321    


Q ss_pred             cccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCccccccc
Q 020254          156 VFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       156 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  230 (328)
                           .+....| .+|...+.....++.+   .++++.+++||.+.++.....   .... .....    .......+..
T Consensus       178 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~----~~~p~~r~~~  245 (280)
T 4da9_A          178 -----SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV---SGKYDGLIES----GLVPMRRWGE  245 (280)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CCBC
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc---chhHHHHHhh----cCCCcCCcCC
Confidence                 1223457 7777777666555443   589999999999988743211   1101 00000    0111234678


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCcc
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++|+|++++.++....   .+.++++.+|..+
T Consensus       246 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          246 PEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            9999999999988654   3449999887543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.85  E-value=1e-20  Score=157.98  Aligned_cols=217  Identities=14%  Similarity=0.081  Sum_probs=146.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+|+||||+|+||+++++.|+++|++|++++|+..+........ .......+|+.|+++++++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3478999999999999999999999999999999875543322111 111134579999888877765       79999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHH----HHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||....   .....+.++..+++|+.++..+.    +.+++  .+..++|++||...  +..         .+....
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~  150 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD--AGGGSIVNISSAAG--LMG---------LALTSS  150 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTCHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEECchhh--ccC---------CCCchh
Confidence            999997533   23456778899999999987544    44444  45679999999876  432         123346


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccc-cHHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI-HLDDIVNLIYEA  241 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~  241 (328)
                      | .+|...+.....+..+   .+++++++|||.++++...   .    ........+........+. +++|+|++++.+
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~----~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l  223 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA---E----TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---H----HTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc---c----cchhHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            7 6777666655544433   4899999999999886311   0    0000000011111112366 999999999999


Q ss_pred             hhCCC---CCceEEecCCCc
Q 020254          242 LSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~~  258 (328)
                      +..+.   .+.++++.+|..
T Consensus       224 ~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          224 LSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCchhcCCCCCEEEECCCcc
Confidence            87542   344888888753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.85  E-value=7.5e-21  Score=156.89  Aligned_cols=194  Identities=19%  Similarity=0.166  Sum_probs=130.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+...............+|+.|.++++++++       ++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4568999999999999999999999999999999865443322110011244679999888776664       789999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |+||....   .....+.+...+++|+.++..+++.+    ++  .+.+++|++||...  +..         .+....|
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~~~~~Y  150 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR--RGGGTIVNVGSLAG--KNP---------FKGGAAY  150 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--TTCEEEEEECCTTT--TSC---------CTTCHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCcEEEEECCchh--cCC---------CCCCchh
Confidence            99997432   23356778889999999987555544    44  56789999999876  432         1233457


Q ss_pred             -HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|...+.....+..   ..+++++++|||.+.++.....    +       ..       +.+++++|+|++++.++.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~-------~~-------~~~~~~~dvA~~~~~l~~  212 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P-------GQ-------AWKLKPEDVAQAVLFALE  212 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------CCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c-------cc-------cCCCCHHHHHHHHHHHhC
Confidence             667655555443332   2489999999999877632110    0       00       115799999999999998


Q ss_pred             CCC
Q 020254          244 NPS  246 (328)
Q Consensus       244 ~~~  246 (328)
                      .+.
T Consensus       213 ~~~  215 (234)
T 2ehd_A          213 MPG  215 (234)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.85  E-value=9.8e-21  Score=159.55  Aligned_cols=221  Identities=17%  Similarity=0.086  Sum_probs=151.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCCCccccCceeecCChhhHhhcC------CCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~   92 (328)
                      ..++++||||+|+||+++++.|+++|++|++++|+.....   .+...........+|+.|.++++++.+      ++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            4578999999999999999999999999999997643211   111111111244578888887766543      7999


Q ss_pred             EEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+||.....   ....+.++..+++|+.++..+++++...  ..+..++|++||...  +...         +....|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~~---------~~~~~Y  178 (273)
T 3uf0_A          110 LVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLS--FQGG---------RNVAAY  178 (273)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------SSCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHh--cCCC---------CCChhH
Confidence            99999975432   3456778899999999999998877431  135678999999876  4321         223467


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                       .+|...+.....++.+   .|+++.+++||.|.++........-... ......|+      ..+..++|+|++++.++
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~v~~L~  252 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA------GRWATPEDMVGPAVFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT------SSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHh
Confidence             7787777666555544   5899999999999987532111000111 11222232      23678999999999998


Q ss_pred             hCCC---CCceEEecCCCcc
Q 020254          243 SNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~~~  259 (328)
                      ....   .+.++++.+|...
T Consensus       253 s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          253 SDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCCcCCEEEECcCccC
Confidence            7533   3449999888644

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.85  E-value=1.6e-20  Score=158.78  Aligned_cols=218  Identities=17%  Similarity=0.074  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCcccccCCC-----CCccccCceeecCC----hhhHhhcC---
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPG-----KKTRFFPGVMIAEE----PQWRDCIQ---   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~d~~~~----~~~~~~~~---   88 (328)
                      +.++++||||+|+||++++++|+++|++|++++| +..........     .....+..+|+.|.    ++++++++   
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999 65433221100     11112446799999    87777664   


Q ss_pred             ----CCcEEEECCCCCCCC---CCCh-----------hHHHHHHHhhhhhHHHHHHHHhcCC-CCC------CcEEEEec
Q 020254           89 ----GSTAVVNLAGTPIGT---RWSS-----------EIKKEIKESRIRVTSKVVDLINESP-EGV------RPSVLVSA  143 (328)
Q Consensus        89 ----~~d~vi~~a~~~~~~---~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~-~~~------~~~v~~Ss  143 (328)
                          ++|+|||+||.....   ....           +.++..+++|+.++..+++++.... .+.      .++|++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence                799999999975322   2233           6678899999999999999988731 223      68999999


Q ss_pred             ccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC
Q 020254          144 TALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL  219 (328)
Q Consensus       144 ~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~  219 (328)
                      ...  +...         +....| .+|...+.....+..+   .|+++++++||.+.++ .........  ......|+
T Consensus       170 ~~~--~~~~---------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~--~~~~~~p~  235 (276)
T 1mxh_A          170 AMT--DLPL---------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQE--EYRRKVPL  235 (276)
T ss_dssp             GGG--GSCC---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHH--HHHTTCTT
T ss_pred             hhh--cCCC---------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHH--HHHhcCCC
Confidence            876  4321         233457 7777766665554433   3899999999999998 221111111  11222222


Q ss_pred             CCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          220 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       220 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +     +.+.+++|+|++++.++....   .+.++++.+|..
T Consensus       236 ~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence            1     227899999999999987533   344889888753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.85  E-value=1.2e-20  Score=156.76  Aligned_cols=210  Identities=14%  Similarity=0.092  Sum_probs=147.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC---
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      .|+|+||||+|+||++++++|+++|+       +|++++|++........    ......+..+|+.|+++++++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999       99999998654332211    11111244579999888877764   


Q ss_pred             ----CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 ----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 ----~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                          ++|+|||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +..        
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~--------  151 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA--TKA--------  151 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC--------
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh--cCC--------
Confidence                799999999975332   3456778899999999999998887531  135679999999876  442        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                       .+....| .+|...+.....+..   ..+++++++|||.++++.......               .. ...+++++|+|
T Consensus       152 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------------~~-~~~~~~~~dva  214 (244)
T 2bd0_A          152 -FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---------------EM-QALMMMPEDIA  214 (244)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---------------TT-GGGSBCHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---------------cc-cccCCCHHHHH
Confidence             1233457 777766665543332   358999999999999985321100               00 23689999999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCCcc
Q 020254          236 NLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++++.++..+.   .++++...++..+
T Consensus       215 ~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          215 APVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHhCCccccchheEEecccccc
Confidence            99999998754   2235555454433

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.85  E-value=1.3e-20  Score=156.84  Aligned_cols=217  Identities=12%  Similarity=0.025  Sum_probs=143.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-Ccccc-cCCCCCccccCceeecCChhhHhhc-------CCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAEL-IFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~   92 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++ ..... +...........+|+.|++++++++       .++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            457899999999999999999999999999999987 43221 1111111123457999988887765       37999


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |||+||....   .....+.++..+++|+.++.++++++    ++  .+..++|++||...  +...         +...
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~  152 (249)
T 2ew8_A           86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR--NGWGRIINLTSTTY--WLKI---------EAYT  152 (249)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--GSCC---------SSCH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCeEEEEEcchhh--ccCC---------CCch
Confidence            9999997533   23456778889999999988877774    44  45679999999876  4321         2334


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-chhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....+..+   .|+++++++||.+.++... ....-.+..  ...  +.  .....+.+++|+|++++.
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~--~~--~~~~~~~~p~dva~~~~~  226 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDV--LPN--ML--QAIPRLQVPLDLTGAAAF  226 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C--TT--SSSCSCCCTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhH--HHH--hh--CccCCCCCHHHHHHHHHH
Confidence            57 6777666665554433   4899999999999987432 110000000  000  00  111247899999999999


Q ss_pred             HhhCCC---CCceEEecCCC
Q 020254          241 ALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~  257 (328)
                      ++....   .+.++++.+|.
T Consensus       227 l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          227 LASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HTSGGGTTCCSCEEEESSSC
T ss_pred             HcCcccCCCCCcEEEECCCc
Confidence            987532   34488887774

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.85  E-value=7.5e-21  Score=157.90  Aligned_cols=214  Identities=15%  Similarity=0.083  Sum_probs=145.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      |+|+||||+|+||++++++|+++|++|+++ +|++.........    ........+|+.|+++++++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999995 6765443221110    0111134579999888887765       799


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|||+||.....   ....+.++..+++|+.++.++++++.+.  +.+..++|++||.... ++.          +....
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-IGN----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HCC----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhc-CCC----------CCCcc
Confidence            999999975432   2455777889999999999998887652  1256799999997651 331          22345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      | .+|...+.....+..+   .+++++++|||.++++....   +....  ......|+      ..+++++|+|++++.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  221 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK---LGEDMEKKILGTIPL------GRTGQPENVAGLVEF  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTSCTT------CSCBCHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh---cChHHHHHHhhcCCC------CCCCCHHHHHHHHHH
Confidence            7 6676665555444332   48999999999998763211   11111  11122222      237899999999999


Q ss_pred             HhhCCC----CCceEEecCCC
Q 020254          241 ALSNPS----YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~----~~g~~~i~~~~  257 (328)
                      ++..+.    .+.+|++.+|.
T Consensus       222 l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          222 LALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTTT
T ss_pred             HhCCCccCCcCCCEEEeCCCc
Confidence            985432    24489998774

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.85  E-value=2.1e-20  Score=158.81  Aligned_cols=220  Identities=13%  Similarity=0.029  Sum_probs=150.0

Q ss_pred             cCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++|+||||+  |+||+++++.|+++|++|++++|+...   ...+...........+|+.|.++++++++       
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            345789999999  999999999999999999999998741   11111000001245679999988877664       


Q ss_pred             CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      ++|+|||+||....       .....+.++..+++|+.++.++++++... .....++|++||.+.  +..         
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------  167 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGA--EKV---------  167 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGG--TSB---------
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchh--ccC---------
Confidence            78999999997532       13456778899999999999999998873 113478999999765  321         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      .+....| .+|...+.....++.+   .|+++++++||.+.++........-... ......|++      .+.+++|+|
T Consensus       168 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~dva  241 (285)
T 2p91_A          168 VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFG------KPITIEDVG  241 (285)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTS------SCCCHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCC------CCcCHHHHH
Confidence            1233467 7777776666554433   4899999999999998542211111111 111122221      257899999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCC
Q 020254          236 NLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++++.++....   .+.+|++.++.
T Consensus       242 ~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          242 DTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCc
Confidence            99999986432   34488888874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.85  E-value=1.1e-20  Score=156.95  Aligned_cols=211  Identities=16%  Similarity=0.113  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-----CCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~   95 (328)
                      ++|++|||||+|+||++++++|++ .|+.|++++|+........      ....+|+.|.++++++++     ++|++||
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL------KFIKADLTKQQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE------EEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc------eEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence            457899999999999999999999 7899999998875221111      145689999998887775     7899999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      +||....   .....+.++..+++|+.++..+++++........++|++||...  +...         +....| .+|.
T Consensus        77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~~~Y~asKa  145 (244)
T 4e4y_A           77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC--FIAK---------PNSFAYTLSKG  145 (244)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG--TCCC---------TTBHHHHHHHH
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH--ccCC---------CCCchhHHHHH
Confidence            9997533   34566788899999999999999998873111247999999876  3321         223457 7787


Q ss_pred             HHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHH------------H-HHHcCCCCCCCCcccccccHHHHH
Q 020254          172 CREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPL------------F-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       172 ~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ..+.....+..   ..|+++.+++||.+.++...   .....            . ......|      ...+.+++|+|
T Consensus       146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dvA  216 (244)
T 4e4y_A          146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR---NLIQKYANNVGISFDEAQKQEEKEFP------LNRIAQPQEIA  216 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH---HHHHHHHHHHTCCHHHHHHHHHTTST------TSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH---HHHHhhhhhcCCCHHHHHHHHhhcCC------CCCCcCHHHHH
Confidence            77776665554   35899999999999876321   11111            1 1111222      23478999999


Q ss_pred             HHHHHHhhCCC---CCceEEecCCCc
Q 020254          236 NLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      ++++.++....   .+.++++.+|..
T Consensus       217 ~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          217 ELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhcCccccccCCeEeECCCcc
Confidence            99999987543   344888887753

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.85  E-value=2.4e-20  Score=154.30  Aligned_cols=215  Identities=15%  Similarity=0.138  Sum_probs=146.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~   95 (328)
                      .|+++||||+|+||++++++|+++|++|++++|++.+......    .....+|+.| +++++++       .++|++||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG----AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT----CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC----cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999999999999999999999999999998765221111    1144578888 7666554       37999999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      +||....   .....+.++..+++|+.++..+++++...  +.+.+++|++||...  +....       .+....| .+
T Consensus        77 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~-------~~~~~~Y~~s  147 (239)
T 2ekp_A           77 AAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT--FTAGG-------PVPIPAYTTA  147 (239)
T ss_dssp             CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCT-------TSCCHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--ccCCC-------CCCCccHHHH
Confidence            9997532   23456778899999999999988887431  135679999999876  44221       1334567 77


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      |...+.....+..+   .|++++++|||.+.++........-... ......|+      ..+..++|+|++++.++...
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dvA~~~~~l~s~~  221 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM------GRWARPEEIARVAAVLCGDE  221 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT------SSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHcCch
Confidence            77666655544433   4899999999999887422110000111 11112222      23689999999999998753


Q ss_pred             C--CCc-eEEecCCC
Q 020254          246 S--YRG-VINGTAPN  257 (328)
Q Consensus       246 ~--~~g-~~~i~~~~  257 (328)
                      .  ..| .+++.+|.
T Consensus       222 ~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          222 AEYLTGQAVAVDGGF  236 (239)
T ss_dssp             GTTCCSCEEEESTTT
T ss_pred             hcCCCCCEEEECCCc
Confidence            2  234 88887764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.85  E-value=2.1e-20  Score=157.81  Aligned_cols=219  Identities=14%  Similarity=0.073  Sum_probs=148.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++........   .........+|+.|.++++++++       ++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            34689999999999999999999999999999998754332211   00011245689999888877664       799


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC----CcEEEEecccceeecCCCcccccCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV----RPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~----~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|||+||....   .....+.++..+++|+.++..+++++...  +.+.    +++|++||...  +...         +
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~--~~~~---------~  176 (276)
T 2b4q_A          108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG--ISAM---------G  176 (276)
T ss_dssp             EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG--TCCC---------C
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH--cCCC---------C
Confidence            99999997533   23456778899999999998877766431  0222    78999999876  4321         1


Q ss_pred             CCC-ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          163 SGN-DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       163 ~~~-~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ... .| .+|...+.....+..+   .++++++++||.+.++..... ......+......|+      ..+.+++|+|+
T Consensus       177 ~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA~  250 (276)
T 2b4q_A          177 EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM------GRWGRPEEMAA  250 (276)
T ss_dssp             CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTT------SSCCCHHHHHH
T ss_pred             CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCC------CCcCCHHHHHH
Confidence            223 67 7787777666555433   489999999999988753211 111111111002232      23789999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCC
Q 020254          237 LIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++.++..+.   .+.++++.+|.
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCCc
Confidence            9999987542   34488887764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.85  E-value=2.2e-20  Score=158.16  Aligned_cols=224  Identities=10%  Similarity=0.041  Sum_probs=153.3

Q ss_pred             cccCCCeEEEEcCCch--hHHHHHHHHHhCCCeEEEEecCC--CcccccCCCCCccccCceeecCChhhHhhcC------
Q 020254           19 QKASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ...+.++|+||||+|+  ||.+++++|+++|++|++++|+.  .....+........+..+|+.|.++++++++      
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            3445679999999977  99999999999999999999987  2222221111111245689999888877663      


Q ss_pred             -CCcEEEECCCCCCCC-------C-CChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCccccc
Q 020254           89 -GSTAVVNLAGTPIGT-------R-WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~-------~-~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                       ++|+|||+||.....       . ...+.+...+++|+.++..+++++... .....++|++||...  +..       
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~-------  172 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGA--EKA-------  172 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGG--TSC-------
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccc--ccC-------
Confidence             689999999975321       1 566778889999999999999988763 224578999999876  332       


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                        .+....| .+|...+.....++.+   .++++.+++||.|.++........-... ......++      ..+..++|
T Consensus       173 --~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~ped  244 (280)
T 3nrc_A          173 --MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------KKNVDIME  244 (280)
T ss_dssp             --CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT------CSCCCHHH
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC------CCCCCHHH
Confidence              2233467 7777766665544433   4899999999999987532221111111 11112222      22678999


Q ss_pred             HHHHHHHHhhCCC---CCceEEecCCCcc
Q 020254          234 IVNLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       234 ~a~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      +|++++.++....   .+.++++.+|..+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            9999999987532   3449999887643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.85  E-value=1.7e-20  Score=159.59  Aligned_cols=221  Identities=12%  Similarity=-0.007  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++||||||+|+||++++++|+++|++|++++|+.......     ...........+|+.|.++++++++       +
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999987532111     1111111244679999888877664       7


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|++||+||....    .....+.++..+++|+.++.++++++........++|++||...  +...         +...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  194 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA--YEGN---------ETLI  194 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH--HHCC---------TTCH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh--cCCC---------CCCh
Confidence            8999999997432    12356788999999999999999999874223458999999876  4322         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....++.+   .|+++.+++||.|.++....  .+.......    +........+.+++|+|++++.+
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~----~~~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS--SFDEKKVSQ----FGSNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH--HSCHHHHHH----TTTTSTTSSCBCGGGTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc--cCCHHHHHH----HHccCCCCCCcCHHHHHHHHHHH
Confidence            57 7787777666555443   38999999999999873110  000111000    01111223467899999999999


Q ss_pred             hhCCC---CCceEEecCCCcc
Q 020254          242 LSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~~~  259 (328)
                      +....   .+.++++.+|..+
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            87543   3448999887543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.2e-20  Score=159.45  Aligned_cols=225  Identities=15%  Similarity=0.047  Sum_probs=157.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ...+++|||||+|+||+++++.|+++|++|++++|+........    ..........+|+.|.++++++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34578999999999999999999999999999999876533321    111112245689999988877764       7


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|++||+||....    .....+.++..+++|+.++..+++++...  ..+..++|++||...  +..        ..+.
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~--------~~~~  155 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVG--HTA--------GFAG  155 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBT--TTB--------CCTT
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh--CcC--------CCCC
Confidence            9999999996422    24556788999999999999998887542  134568999999775  411        1223


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHH-HH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIP-LF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ...| .+|...+.....++.+   .|+++.+++||.+.++.... .....+ .. ......|+      ..+..++|+|+
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~  229 (280)
T 3tox_A          156 VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL------KRIARPEEIAE  229 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT------SSCBCHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc------CCCcCHHHHHH
Confidence            4467 7787777666555544   48999999999999885322 100011 11 11122222      23789999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCccCH
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPVRL  261 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~~~  261 (328)
                      +++.++....   .+.++++.+|..++.
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHhCccccCCcCcEEEECCCccccc
Confidence            9999987643   344999999876654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.85  E-value=2.4e-20  Score=157.45  Aligned_cols=223  Identities=13%  Similarity=0.063  Sum_probs=153.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .+.++++||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.++++++++       ++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999987654332211 1111244689999988877764       7999


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +...         +....|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  173 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA--TSAI---------ADRTAY  173 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG--TSCC---------TTBHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--CcCC---------CCChhH
Confidence            9999997533   23456788899999999999888877542  145568999999876  4321         223467


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCC-Ccch---hhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD-GGAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~-~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                       .+|...+.....++.+   .|+++.+++||.+.++. ....   ....... ......++      ..+.+++|+|+++
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~~~pedvA~~v  247 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM------DRMGTAEEIAEAM  247 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTT------CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcc------cCCcCHHHHHHHH
Confidence             7777776666555443   38999999999998763 1000   0001111 11222222      2367899999999


Q ss_pred             HHHhhCCC---CCceEEecCCCccC
Q 020254          239 YEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      +.++....   .+.++++.+|..++
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          248 LFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHhCCccCCCcCCEEEECCchhhh
Confidence            99987543   34499998886544

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.85  E-value=2e-20  Score=157.44  Aligned_cols=223  Identities=13%  Similarity=0.055  Sum_probs=148.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      .+.++++||||+|+||++++++|+++|++|++++|++.+.......      ........+|+.|.++++++++      
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3457899999999999999999999999999999987543322110      1111234579999988877764      


Q ss_pred             -CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                       ++|+|||+||....    .....+.++..+++|+.++..+.+++...  +.+..++|++||...  +..         .
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~  159 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG--IRG---------I  159 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSB---------C
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhh--ccC---------C
Confidence             78999999997532    13456778899999999887665554321  045679999999875  321         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-----hhhHHH-H-HHHcCCCCCCCCccccccc
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-----AKMIPL-F-MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-----~~~~~~-~-~~~~~~~~~~~~~~~~~i~  230 (328)
                      +....| .+|...+.....++.+   .|+++++++||.+.++.....     ...... . ......|+      ..+.+
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~  233 (267)
T 1iy8_A          160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS------KRYGE  233 (267)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT------CSCBC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCC------CCCcC
Confidence            223457 6776666555444332   489999999999987631110     011110 0 11111222      23689


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++|+|++++.++..+.   .+.++++.+|...+
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            9999999999987542   34488888876443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.85  E-value=5.9e-21  Score=160.65  Aligned_cols=219  Identities=13%  Similarity=0.054  Sum_probs=151.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ...+++|||||+|+||+++++.|+++|++|++++|+..........    ........+|+.|.++++++++       +
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            3457899999999999999999999999999999987544322110    1111244579999888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +..
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  174 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG--SAGN---------PGQ  174 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHCC---------TTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--CCCC---------CCc
Confidence            9999999997543   23456788899999999999999887531  134568999999775  3221         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..| .+|...+.....++.+   .|+++.+++||.|.++...   .+....  ......|+      ..+.+++|+|+++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~p~------~r~~~pedvA~~v  245 (270)
T 3ftp_A          175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK---GLPQEQQTALKTQIPL------GRLGSPEDIAHAV  245 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH---HSCHHHHHHHHTTCTT------CSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh---hcCHHHHHHHHhcCCC------CCCCCHHHHHHHH
Confidence            457 7777666665555443   4899999999999876311   111111  11222232      2368999999999


Q ss_pred             HHHhhCCC---CCceEEecCCCcc
Q 020254          239 YEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      +.++....   .+.++++.+|..+
T Consensus       246 ~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          246 AFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHhCCCcCCccCcEEEECCCccc
Confidence            99986433   3449999888654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.85  E-value=9.6e-21  Score=158.10  Aligned_cols=226  Identities=14%  Similarity=0.012  Sum_probs=156.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ...++++||||+|+||++++++|+++|++|++++|+........... .......+|+.|.++++++++       ++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            34579999999999999999999999999999999876543332110 111244679999888776553       7899


Q ss_pred             EEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           93 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        93 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      +||+||.....   ....+.++..+++|+.++..+++++........++|++||...  +...         +....| .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~a  154 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD--EGGH---------PGMSVYSA  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG--SSBC---------TTBHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh--cCCC---------CCchHHHH
Confidence            99999975432   3466788899999999999999999873112358999999876  4321         233467 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc--h-hhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--L-AKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~-~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...+.....++.+   .|+++.+++||.+.++....  . ......+  ......|+      ..+..++|+|++++.
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~  228 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM------KRNGTADEVARAVLF  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC------CCCcCHHHHHHHHHH
Confidence            787777666555544   38999999999999874321  1 1111111  11112222      236789999999999


Q ss_pred             HhhCCC--CCceEEecCCCccCHHH
Q 020254          241 ALSNPS--YRGVINGTAPNPVRLAE  263 (328)
Q Consensus       241 ~~~~~~--~~g~~~i~~~~~~~~~e  263 (328)
                      ++....  .+.++++.+|...++.+
T Consensus       229 L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          229 LAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             HcCcCcCccCCEEEECCCccccCcC
Confidence            987532  34499999887665443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.85  E-value=1.3e-20  Score=157.85  Aligned_cols=219  Identities=12%  Similarity=0.059  Sum_probs=146.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccCCC-----CCccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++.. .......     ........+|+.|+++++++++       
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            34789999999999999999999999999999998765 3222110     1111244579999988877764       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +.
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  151 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG--LVAS---------AN  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------TT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHh--CcCC---------CC
Confidence            79999999997532   23456778899999999999988877531  135679999999876  3321         23


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHH-------H-H-HH-HcCCCCCCCCccccc
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIP-------L-F-MM-FAGGPLGSGQQWFSW  228 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~-------~-~-~~-~~~~~~~~~~~~~~~  228 (328)
                      ...| .+|...+.....+..+   .++++++++||.+.++..... .....       . . .. ....|      ...+
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~  225 (260)
T 1x1t_A          152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQP------SLQF  225 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCT------TCCC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCC------CCCC
Confidence            3467 7777666665544433   489999999999998743211 00000       0 0 00 00111      1347


Q ss_pred             ccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          229 IHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      .+++|+|++++.++....   .+.++++.+|.
T Consensus       226 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            899999999999987532   34488888774

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.85  E-value=8.2e-21  Score=157.96  Aligned_cols=220  Identities=13%  Similarity=0.051  Sum_probs=152.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.|+++||||+|+||++++++|+++|++|++++|+.........    ......+..+|+.|.++++++++       ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998765433211    11111244579999888877664       58


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+...
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~  152 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVG--SAG---------NPGQT  152 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHC---------CTTCH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh--ccC---------CCCcH
Confidence            9999999975332   3456778899999999999988876542  134568999999765  332         12334


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....+..+   .++++.+++||.+.++........... ......+      ...+.+++|+|++++.+
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~------~~~~~~~~dva~~i~~l  225 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKS-FIATKIP------SGQIGEPKDIAAAVAFL  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHH-HHHTTST------TCCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHH-HHhhcCC------CCCCcCHHHHHHHHHHH
Confidence            57 7777666655544443   489999999999988754322111110 1112222      23478999999999999


Q ss_pred             hhCCC---CCceEEecCCCcc
Q 020254          242 LSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~~~  259 (328)
                      +....   .+.++++.+|..+
T Consensus       226 ~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          226 ASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTSSC
T ss_pred             hCCCcCCccCCEEEECCCEec
Confidence            87543   3449999888644

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=4.5e-20  Score=153.48  Aligned_cols=212  Identities=15%  Similarity=0.058  Sum_probs=141.6

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc---CCCcEEEE
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVN   95 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vi~   95 (328)
                      .....++|+||||+|+||+++++.|+++|++|++++|++...... .   ..... +|+  .+++++++   .++|+|||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~---~~~~~-~D~--~~~~~~~~~~~~~iD~lv~   87 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G---HRYVV-CDL--RKDLDLLFEKVKEVDILVL   87 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C---SEEEE-CCT--TTCHHHHHHHSCCCSEEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C---CeEEE-eeH--HHHHHHHHHHhcCCCEEEE
Confidence            344568999999999999999999999999999999986433222 1   11133 576  33444443   48999999


Q ss_pred             CCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHH----HhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           96 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        96 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      +||.....   ....+.++..+++|+.++..+.++    +++  .+.+++|++||...  |...         +....| 
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~~Y~  154 (249)
T 1o5i_A           88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE--KGWGRIVAITSFSV--ISPI---------ENLYTSN  154 (249)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC---------TTBHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcchHh--cCCC---------CCCchHH
Confidence            99975332   335677888999999997766544    444  45679999999876  5422         223456 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      .+|...+.....+..+   .|++++++|||.+.++...... .... .......|+      ..+.+++|+|++++.++.
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~p~------~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK-KQVESQIPM------RRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH-HHHHTTSTT------SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHH-HHHHhcCCC------CCCcCHHHHHHHHHHHcC
Confidence            6676665555444332   4899999999999988532110 1111 011122222      347899999999999987


Q ss_pred             CCC---CCceEEecCCC
Q 020254          244 NPS---YRGVINGTAPN  257 (328)
Q Consensus       244 ~~~---~~g~~~i~~~~  257 (328)
                      ...   .+.+|++.+|.
T Consensus       228 ~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             ccccCCCCCEEEECCCc
Confidence            532   34489988875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=2.1e-20  Score=157.05  Aligned_cols=221  Identities=15%  Similarity=0.030  Sum_probs=149.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.+++|||||+|+||+++++.|+++|++|++++|+..+.......     ........+|+.|+++++++++       
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457899999999999999999999999999999986543221110     1111134579999888877664       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||.....   ....+.++..+++|+.++.++++++...  ..+.+++|++||..++..+          .+.
T Consensus        99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~  168 (267)
T 1vl8_A           99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----------MPN  168 (267)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----------SSS
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC----------CCC
Confidence            799999999975332   3455677889999999999998877431  1456799999998732111          122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|...+.....+..+   .|+++++++||.+.++.......--... ......|+      ..+..++|+|+++
T Consensus       169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA~~v  242 (267)
T 1vl8_A          169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL------GRTGVPEDLKGVA  242 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT------SSCBCGGGGHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC------CCCcCHHHHHHHH
Confidence            3457 7777766665554433   4899999999999887432110000111 11122232      2368899999999


Q ss_pred             HHHhhCCC---CCceEEecCCC
Q 020254          239 YEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +.++....   .+.++.+.+|.
T Consensus       243 ~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          243 VFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHcCccccCCcCCeEEECCCC
Confidence            99987532   33488887764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.85  E-value=2.2e-20  Score=158.23  Aligned_cols=228  Identities=17%  Similarity=0.061  Sum_probs=151.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.+++|||||+|+||+++++.|+++|++|++++|+........    ..........+|+.|+++++++++       +
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999876543221    111112244679999988877664       7


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|++||+||....    .....+.++..+++|+.++..+++++...  +.+..++|++||...  +...       ..+.
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~--~~~~-------~~~~  176 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSING--TRTF-------TTPG  176 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TTBC-------CSTT
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhh--ccCC-------CCCC
Confidence            9999999997422    24556788899999999999999988321  045678999999765  2210       1123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcc--cccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW--FSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~D~a~~  237 (328)
                      ...| .+|...+.....++.+   .|+++.+++||.+..+..........................  ..+..++|+|++
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          177 ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            4567 7787777766655544   489999999999988753221110110000000000010111  236789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++.++....   .+.++++.+|.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHcCccccCCcCCEEEECcCc
Confidence            999987543   34488887764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.84  E-value=4.6e-20  Score=156.27  Aligned_cols=226  Identities=14%  Similarity=0.068  Sum_probs=151.4

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-------------cccc----CCCCCccccCceeecCCh
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-------------AELI----FPGKKTRFFPGVMIAEEP   81 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~----~~~~~~~~~~~~d~~~~~   81 (328)
                      ...+.++++||||+|+||++++++|+++|++|++++|+...             ....    ...........+|+.|.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            33456789999999999999999999999999999985321             1110    111111123457999998


Q ss_pred             hhHhhcC-------CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEeccccee
Q 020254           82 QWRDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGY  148 (328)
Q Consensus        82 ~~~~~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~  148 (328)
                      +++++++       ++|++||+||.....   ....+.++..+++|+.++.++++++...  +. ...++|++||...  
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--  168 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG--  168 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh--
Confidence            8877764       799999999975432   3456778889999999999999887542  02 2567999999875  


Q ss_pred             ecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHH----HHcCCCCC
Q 020254          149 YGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM----MFAGGPLG  220 (328)
Q Consensus       149 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~----~~~~~~~~  220 (328)
                      +...         +....| .+|...+.....++.+   .|+++.+++||.+.++..... .....+.    .....+..
T Consensus       169 ~~~~---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~  238 (280)
T 3pgx_A          169 LKAT---------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE-AMMEIFARHPSFVHSFPPM  238 (280)
T ss_dssp             TSCC---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH-HHHHHHHHCGGGGGGSCCB
T ss_pred             ccCC---------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh-hhhhhhhcCchhhhhhhhc
Confidence            3321         223457 7777776666555543   589999999999999864321 1111110    00111111


Q ss_pred             CCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          221 SGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       221 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      . ..+..+.+++|+|++++.++....   .+.++++.+|.
T Consensus       239 ~-~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          239 P-VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             T-TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             c-cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1 112248899999999999987543   34488888774

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.84  E-value=6e-21  Score=160.67  Aligned_cols=222  Identities=14%  Similarity=0.083  Sum_probs=153.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..+++|||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.++++++++       ++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            45789999999999999999999999999999998765433211    11112245689999988887765       79


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||.....   ....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+...
T Consensus       105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~--~~~---------~~~~~  173 (271)
T 4ibo_A          105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTS--ELA---------RATVA  173 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSB---------CTTCH
T ss_pred             CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHh--CCC---------CCCch
Confidence            9999999975432   3456788899999999999997776542  134568999999765  221         12334


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....++.+   .|+++.+++||.+.++........-... ......|+      ..+..++|+|++++.
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~v~~  247 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA------KRWGKPQELVGTAVF  247 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT------CSCBCGGGGHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            57 7777776666555443   4899999999999887432110000111 11222232      236789999999999


Q ss_pred             HhhCCC---CCceEEecCCCccC
Q 020254          241 ALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++....   .+.++++.+|...+
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          248 LSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCccccCCCCcEEEECCCeecc
Confidence            887543   34499998886443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.84  E-value=8.7e-21  Score=159.49  Aligned_cols=225  Identities=14%  Similarity=0.065  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.|+|+||||+|+||++++++|+++|++|++++|+..+.......     .....+..+|+.|.++++++++       +
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            346899999999999999999999999999999976543211100     0111244579999888776654       5


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--C-CCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||.....   ....+.++..+++|+.++.++++++...  + ...+++|++||...  +......  .....+
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~~--~~~~~~  168 (265)
T 1h5q_A           93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQSS--LNGSLT  168 (265)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCCEEE--TTEECS
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchh--hcccccc--cccccc
Confidence            89999999975332   2356777888999999999999987652  0 12478999999875  3322110  011122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|...+.....+..+   .+++++++|||.++++..... .....  ......++      ..+++++|+|+++
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~~  240 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPL------NRFAQPEEMTGQA  240 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTT------SSCBCGGGGHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHH--HHHhcCcc------cCCCCHHHHHHHH
Confidence            3457 7777766666554433   489999999999998753221 11111  11122222      2378999999999


Q ss_pred             HHHhhCCC---CCceEEecCCCc
Q 020254          239 YEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +.++..+.   .+..|++.+|..
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhhccCchhcCcCcEEEecCCEe
Confidence            99987542   344899988753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.84  E-value=3.7e-20  Score=153.69  Aligned_cols=216  Identities=14%  Similarity=0.079  Sum_probs=148.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|+++||||+|+||++++++|+++|++|++++|++.+......... .....+|+.|+++++++++       ++|+||
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999999999999999998755433221111 1244579999888877664       589999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  ++..          ....| .
T Consensus        83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~----------~~~~Y~a  150 (245)
T 1uls_A           83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LGNL----------GQANYAA  150 (245)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GCCT----------TCHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchh--cCCC----------CchhHHH
Confidence            99997533   23356778889999999999998877652  135678999999873  5532          23456 6


Q ss_pred             HHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          169 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       169 ~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      +|...+.....+..   ..|+++++++||.+.++...... ....  ......|.+      .+.+++|+|++++.++..
T Consensus       151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~------~~~~~~dvA~~v~~l~s~  222 (245)
T 1uls_A          151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVRE--KAIAATPLG------RAGKPLEVAYAALFLLSD  222 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHH--HHHHTCTTC------SCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhhCCCC------CCcCHHHHHHHHHHHhCc
Confidence            66655554444332   24899999999999877432211 1111  111222221      268999999999999875


Q ss_pred             CC---CCceEEecCCCc
Q 020254          245 PS---YRGVINGTAPNP  258 (328)
Q Consensus       245 ~~---~~g~~~i~~~~~  258 (328)
                      ..   .+.++.+.+|..
T Consensus       223 ~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          223 ESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             hhcCCcCCEEEECCCcc
Confidence            32   344888877753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=1.1e-20  Score=158.66  Aligned_cols=221  Identities=14%  Similarity=0.132  Sum_probs=152.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ...+++|||||+|+||++++++|+++|++|++++|+..+......    ......+..+|+.|.++++++++       +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            345789999999999999999999999999999998764433211    11111244679999988877664       7


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....    .....+.+...+++|+.++.++++++... .....++|++||...  +..         .+..
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  157 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVV--RHS---------QAKY  157 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGG--GCC---------CTTC
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchh--ccC---------CCcc
Confidence            8999999986321    24456788899999999999999887542 112368999999876  332         1233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh-h-------HH-HH-HHHcCCCCCCCCccccccc
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-M-------IP-LF-MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~-------~~-~~-~~~~~~~~~~~~~~~~~i~  230 (328)
                      ..| .+|...+.....++.+   .|+++.+++||.|+++....... .       .. .. ......|      ...+.+
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~  231 (264)
T 3ucx_A          158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD------LKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS------SSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC------cccCCC
Confidence            467 7787777666555544   58999999999998874211100 0       00 01 1112222      234789


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      ++|+|++++.++....   .+.++++.+|..
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999999987533   344999988864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.84  E-value=2e-20  Score=157.31  Aligned_cols=217  Identities=15%  Similarity=0.109  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|+.... ....    ..........+|+.|.++++++++       +
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999854322 1111    111111244679999988877764       7


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +..
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  175 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVG--EMGN---------PGQ  175 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHH--HHCC---------TTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--cCCC---------CCc
Confidence            89999999975432   3456788899999999999998887431  135678999999765  3211         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....++.+   .|+++.+++||.|.++.....   .. .......|+      ..+.+++|+|++++.
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~-~~~~~~~p~------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL---AA-EKLLEVIPL------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH---HH-HHHGGGCTT------SSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc---cH-HHHHhcCCC------CCCCCHHHHHHHHHH
Confidence            467 7777666665554443   489999999999988754221   11 112222232      236889999999999


Q ss_pred             HhhCCC----CCceEEecCCCcc
Q 020254          241 ALSNPS----YRGVINGTAPNPV  259 (328)
Q Consensus       241 ~~~~~~----~~g~~~i~~~~~~  259 (328)
                      ++..+.    .+.++++.+|..+
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HhCCcccCCCcCCEEEECCCeec
Confidence            998732    3449999888654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.84  E-value=1e-20  Score=158.15  Aligned_cols=219  Identities=16%  Similarity=0.064  Sum_probs=146.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .++++||||+|+||++++++|+++|++|++++|++........    .........+|+.|.++++++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999998754332211    01111244579999988887765       799


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|||+||....   .....+.++..+++|+.++..+++++...  +.+ ..++|++||.... ++.          +...
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~  150 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH-VGN----------PELA  150 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-SCC----------TTBH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCC----------CCch
Confidence            99999997433   23456778889999999998887776542  123 5689999997651 221          2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh---------hHHHHH-HHcCCCCCCCCcccccccH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK---------MIPLFM-MFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~i~v  231 (328)
                      .| .+|...+.....+..+   .++++++++||.+.++.......         .-.... .....|+      ..+.++
T Consensus       151 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p  224 (256)
T 1geg_A          151 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL------GRLSEP  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT------CSCBCH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC------CCCcCH
Confidence            57 6777666655544432   48999999999998763111000         000001 1111121      237899


Q ss_pred             HHHHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          232 DDIVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +|+|++++.++..+.   .+.++++.+|..
T Consensus       225 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          225 EDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            999999999987542   334888887753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.84  E-value=1.9e-20  Score=155.07  Aligned_cols=205  Identities=15%  Similarity=0.070  Sum_probs=145.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---------CCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d   91 (328)
                      .++|+|+||||+|+||++++++|+++|++|++++|++......      .....+|+.|.++++++++         ++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA------SVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSE------EEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCC------cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            4467899999999999999999999999999999987653321      1245689999888776664         689


Q ss_pred             EEEECCCCCCCC----CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           92 AVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        92 ~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +|||+||.....    ....+.++..+++|+.++..+++++........++|++||...  +...         +....|
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  147 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA--LDGT---------PGMIGY  147 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSCC---------TTBHHH
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH--ccCC---------CCchHH
Confidence            999999975332    2334667888999999999999988762111358999999876  4321         223457


Q ss_pred             -HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|...+.....++.+     .++++++++||.+-.+.       ....   ..     ......++..+|+|++++.+
T Consensus       148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-------~~~~---~~-----~~~~~~~~~~~~vA~~v~~l  212 (241)
T 1dhr_A          148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------NRKS---MP-----EADFSSWTPLEFLVETFHDW  212 (241)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------HHHH---ST-----TSCGGGSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-------cccc---Cc-----chhhccCCCHHHHHHHHHHH
Confidence             7777777766665543     46999999999887652       1100   00     01123467889999999999


Q ss_pred             hhCCC---CCceEEecCCC
Q 020254          242 LSNPS---YRGVINGTAPN  257 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~  257 (328)
                      +....   .+..+.+.++.
T Consensus       213 ~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          213 ITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HTTTTCCCTTCEEEEEEET
T ss_pred             hcCCCcCccceEEEEeCCC
Confidence            87643   34477776654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.84  E-value=1.3e-20  Score=158.40  Aligned_cols=222  Identities=14%  Similarity=0.094  Sum_probs=152.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++||||||+|+||+++++.|+++|++|++++|+..+.......     .....+..+|+.|.++++++++       
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999999987654322110     1111245689999998877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|++||+||....   .....+.++..+++|+.++..+++++...  +. ...++|++||...  +..         .+
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  166 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAA--LAP---------LP  166 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhh--ccC---------CC
Confidence            79999999997543   23456778889999999999998887542  01 2458999999876  432         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-HHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....++.+   .|+++.+++||.|.++........... .......|+      ..+..++|+|++
T Consensus       167 ~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~  240 (266)
T 4egf_A          167 DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL------GRFAVPHEVSDA  240 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT------SSCBCHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence            23457 7777666665555443   489999999999987632111000011 122223333      236789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCcc
Q 020254          238 IYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++.++....   .+.++++.+|..+
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          241 VVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCccCcEEEECCCccC
Confidence            999987533   3449999887543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=9.6e-21  Score=162.41  Aligned_cols=222  Identities=14%  Similarity=0.082  Sum_probs=149.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---------CCCccccCceeecCChhhHhhcC---
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      ...++|+||||+|+||++++++|+++|++|++++|+.........         ......+..+|+.|.++++++++   
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            345799999999999999999999999999999998654322110         01111244579999888877764   


Q ss_pred             ----CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                          ++|+|||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  ++.        
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~--------  165 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AGF--------  165 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc--cCC--------
Confidence                59999999996432   23455677889999999999999987651  123568999998763  332        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC-cchhhhHHH-H-HHHcCCCCCCCCcccccccHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~  232 (328)
                        +....| .+|...+.....+..+   .|++++++|||.++++.. ......... . ......+      ...+.+++
T Consensus       166 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~  237 (303)
T 1yxm_A          166 --PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP------AKRIGVPE  237 (303)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST------TSSCBCTH
T ss_pred             --CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc------ccCCCCHH
Confidence              223456 6666655555444433   389999999999999831 111110000 0 0011111      12378999


Q ss_pred             HHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          233 DIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       233 D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      |+|++++.++....   .+.++++.+|...+
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999986532   34499998886554

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.84  E-value=8.9e-21  Score=157.76  Aligned_cols=216  Identities=13%  Similarity=0.092  Sum_probs=136.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..|+|+||||+|+||++++++|+++|++|+++ .|++........    ......+..+|+.|+++++++++       +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999999999999 555543322110    01111244679999988877765       7


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||.....   ....+.++..+++|+.++.++++++.+.  +.+.+++|++||.... |+.          +..
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~  152 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI-IGN----------AGQ  152 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------C
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc-cCC----------CCC
Confidence            99999999975321   2344556788999999988887776541  1356789999997531 442          223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..| .+|...+.....+..+   .++++++++||.+.++...   .+....  ....+.++      ..+++++|+|+++
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~------~~~~~~~dva~~~  223 (247)
T 2hq1_A          153 ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD---VLPDKVKEMYLNNIPL------KRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---TSCHHHHHHHHTTSTT------SSCBCHHHHHHHH
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh---hcchHHHHHHHhhCCC------CCCCCHHHHHHHH
Confidence            457 7777666665554433   3899999999998765211   111111  11222222      3478999999999


Q ss_pred             HHHhhCCC---CCceEEecCCC
Q 020254          239 YEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +.++..+.   .+.+|++.+|.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            99887532   34499998875

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=7.8e-21  Score=160.01  Aligned_cols=226  Identities=16%  Similarity=0.080  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++++||||+|+||++++++|+++|++|++++|++.................+|+.|.++++++++       ++|+||
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999875543322111111245689999988877764       789999


Q ss_pred             ECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....    .....+.++..+++|+.++.++++++... .....++|++||.... ++.          +....| .
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~~Y~a  156 (270)
T 1yde_A           88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA-IGQ----------AQAVPYVA  156 (270)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH-HCC----------TTCHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCcccc-CCC----------CCCcccHH
Confidence            99997432    23345678899999999999999888642 0124789999997541 332          223457 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch----hhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...+.....+..+   .|++++++|||.++++.....    ....... ......|++      .+..++|+|++++.
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~------r~~~p~dva~~v~~  230 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGAAAVF  230 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCC------CCcCHHHHHHHHHH
Confidence            777766665554432   589999999999998732110    0001111 111222322      25789999999999


Q ss_pred             HhhCCC-CCc-eEEecCCCccCHHHH
Q 020254          241 ALSNPS-YRG-VINGTAPNPVRLAEM  264 (328)
Q Consensus       241 ~~~~~~-~~g-~~~i~~~~~~~~~e~  264 (328)
                      ++.... ..| .+++.+|..+.+.+.
T Consensus       231 L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          231 LASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             HcccCCCcCCCEEEECCCeecccCcC
Confidence            887533 344 899988876654433

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.84  E-value=1.2e-20  Score=158.23  Aligned_cols=226  Identities=12%  Similarity=0.022  Sum_probs=145.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .+.++++||||+|+||++++++|+++|++|++++|+..+..+.... ........+|+.|.++++++++       ++|+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            3457999999999999999999999999999999987654433211 0111244679999888877664       7899


Q ss_pred             EEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC------CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           93 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES------PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        93 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      |||+||....    .....+.++..+++|+.++.++++++...      +....++|++||...  +..         .+
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA--GRP---------RP  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTT--TSC---------CT
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhh--cCC---------CC
Confidence            9999997532    12356778889999999998888877542      011346999999775  322         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....++.+   .++++.+++||.+.++...... .......    ..+........+++++|+|++
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~dva~~  231 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIR----KKFRDSIPMGRLLKPDDLAEA  231 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHH----HHHhhcCCcCCCcCHHHHHHH
Confidence            23457 7777776666555443   4899999999999887432110 0000000    001111122347899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccCH
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVRL  261 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~~  261 (328)
                      ++.++....   .+.++++.+|..++-
T Consensus       232 ~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          232 AAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHcCCcccCcCCcEEEecCCcccCC
Confidence            999986433   344999999876653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.84  E-value=4.4e-20  Score=153.41  Aligned_cols=210  Identities=15%  Similarity=0.114  Sum_probs=145.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|++.+.....       ...+|+.|+++++++++       ++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-------CeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999875433221       24579999888876664       689999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....   .....+.++..+++|+.++.++++++.+.  +.+..++|++||.... ++.          +....| .
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~~Y~~  155 (247)
T 1uzm_A           87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL-WGI----------GNQANYAA  155 (247)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc-cCC----------CCChhHHH
Confidence            99997532   24456788999999999999998877542  1456789999997641 321          223457 6


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      +|...+.....+..+   .++++++++||.+.++...   .+....  ......|.      ..+.+++|+|++++.++.
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---~~~~~~~~~~~~~~p~------~~~~~~~dvA~~~~~l~s  226 (247)
T 1uzm_A          156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR---ALDERIQQGALQFIPA------KRVGTPAEVAGVVSFLAS  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HSCHHHHHHHGGGCTT------CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh---hcCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHcC
Confidence            776666555444332   4899999999999765211   111111  11111121      237899999999999987


Q ss_pred             CCC---CCceEEecCCCc
Q 020254          244 NPS---YRGVINGTAPNP  258 (328)
Q Consensus       244 ~~~---~~g~~~i~~~~~  258 (328)
                      ...   .+.++++.+|..
T Consensus       227 ~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          227 EDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             ccccCCcCCEEEECCCcc
Confidence            532   344899988754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.84  E-value=1.4e-20  Score=159.29  Aligned_cols=220  Identities=12%  Similarity=0.055  Sum_probs=150.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+++++|||||+|+||++++++|+++|++|++++|+........    ..........+|+.|.++++++++       +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34578999999999999999999999999999999876533221    111112244579999988876664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhc--C--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE--S--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|+|||+||....   .....+.++..+++|+.++..+++++..  .  ..+..++|++||...  +..         .+
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~--~~~---------~~  170 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG--KQG---------VM  170 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGG--TSC---------CT
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhh--ccC---------CC
Confidence            8999999997543   2345677888999999999999988754  1  134568999999876  322         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh--------hHHH-H-HHHcCCCCCCCCccccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--------MIPL-F-MMFAGGPLGSGQQWFSW  228 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~--------~~~~-~-~~~~~~~~~~~~~~~~~  228 (328)
                      ....| .+|...+.....++.+   .|+++.+++||.|.++.......        .... . ......|+      ..+
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~  244 (279)
T 3sju_A          171 YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL------GRY  244 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT------SSC
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC------CCC
Confidence            23457 7787766666555544   48999999999998763111000        0011 1 11222222      236


Q ss_pred             ccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          229 IHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ..++|+|++++.++....   .+.++++.+|.
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            889999999999987643   34489998874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.84  E-value=1.3e-20  Score=156.78  Aligned_cols=219  Identities=15%  Similarity=0.052  Sum_probs=152.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .+.++++||||+|+||++++++|+++|++|++++|+........... .......+|+.|.++++++++       ++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34579999999999999999999999999999999876543322110 001134579999988887765       7999


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+....|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y  155 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVG--TMG---------NAGQANY  155 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhh--cCC---------CCCChHH
Confidence            9999997543   23456788899999999999998887541  134568999999765  321         1233467


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                       .+|...+.....++.+   .|+++.+++||.+..+......... ........|.      ..+.+++|+|++++.++.
T Consensus       156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~p~------~r~~~p~dva~~v~~L~s  228 (248)
T 3op4_A          156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ-RTATLAQVPA------GRLGDPREIASAVAFLAS  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHH-HHHHHHTCTT------CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHH-HHHHHhcCCC------CCCcCHHHHHHHHHHHcC
Confidence             7777666665554443   4899999999999887532211100 1112223232      236899999999999987


Q ss_pred             CCC---CCceEEecCCC
Q 020254          244 NPS---YRGVINGTAPN  257 (328)
Q Consensus       244 ~~~---~~g~~~i~~~~  257 (328)
                      ...   .+.++++.+|.
T Consensus       229 ~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          229 PEAAYITGETLHVNGGM  245 (248)
T ss_dssp             GGGTTCCSCEEEESTTS
T ss_pred             CccCCccCcEEEECCCe
Confidence            543   34489998875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.84  E-value=1.5e-20  Score=156.61  Aligned_cols=220  Identities=12%  Similarity=0.074  Sum_probs=144.4

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC---CCcEEEE
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ---GSTAVVN   95 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~d~vi~   95 (328)
                      ....++||||||+|+||+++++.|+++|++|++++|+..+........ ....+..+|+.+.+.+.++++   ++|+|||
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            345679999999999999999999999999999999876543322110 011134578888888887775   7899999


Q ss_pred             CCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           96 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        96 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      +||....   .....+.++..+++|+.++.++++++...  ..+..++|++||...  +...         +....| .+
T Consensus        91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~~s  159 (249)
T 3f9i_A           91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG--IAGN---------PGQANYCAS  159 (249)
T ss_dssp             CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC----CC---------SCSHHHHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHh--ccCC---------CCCchhHHH
Confidence            9997532   23445667899999999999998877431  134568999999876  4322         233457 77


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      |...+.....+..+   .++++.+++||.+.++...... ....  ......+.      ..+.+++|+|++++.++...
T Consensus       160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~~~~l~s~~  231 (249)
T 3f9i_A          160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQRE--AIVQKIPL------GTYGIPEDVAYAVAFLASNN  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHH--HHHHHCTT------CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHcCCc
Confidence            77666665554443   4899999999999887532211 1111  11122222      34788999999999998764


Q ss_pred             C---CCceEEecCCCc
Q 020254          246 S---YRGVINGTAPNP  258 (328)
Q Consensus       246 ~---~~g~~~i~~~~~  258 (328)
                      .   .+.++++.+|..
T Consensus       232 ~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          232 ASYITGQTLHVNGGML  247 (249)
T ss_dssp             GTTCCSCEEEESTTSS
T ss_pred             cCCccCcEEEECCCEe
Confidence            3   345999988753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.84  E-value=1.9e-20  Score=155.59  Aligned_cols=217  Identities=16%  Similarity=0.101  Sum_probs=145.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|+||+++++.|+++|++|++++| ++.+.....    ..........+|+.|+++++++++       +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3478999999999999999999999999999999 543322111    001111244579999988877765       7


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||.....   ....+.++..+++|+.++..+.+++...  +.+..++|++||...  +...         +..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  151 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVG--VTGN---------PGQ  151 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHCC---------TTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHh--cCCC---------CCC
Confidence            99999999975332   3456778899999999977766655431  035679999999765  3211         223


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|...+.....+..   ..++++++++||.+.++...... .....  .....|.      ..+++++|+|++++
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~p~------~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAE--MLKLIPA------AQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHH--HHHTCTT------CSCBCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHH--HHhcCCC------CCCcCHHHHHHHHH
Confidence            456 667655555443332   24899999999999877432211 11111  1122222      23789999999999


Q ss_pred             HHhhCCC---CCceEEecCCC
Q 020254          240 EALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~  257 (328)
                      .++..+.   .+.++++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            9986532   34488888774

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.84  E-value=1.3e-20  Score=158.98  Aligned_cols=219  Identities=16%  Similarity=0.059  Sum_probs=142.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .++++|+||||+|+||++++++|+++|++|+++ .|+........    .......+..+|+.|.++++++++       
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            345689999999999999999999999999887 45443322211    111111244679999888877664       


Q ss_pred             CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-C----CCCCcEEEEecccceeecCCCcccccC
Q 020254           89 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P----EGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~----~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                      ++|+|||+||....    .....+.++..+++|+.++..+++++... .    .+..++|++||...  +....      
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~------  175 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAA--ILGSA------  175 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHH--HHCCT------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHh--ccCCC------
Confidence            78999999997532    12356778899999999999998887652 1    13567999999775  32111      


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                        +....| .+|...+.....+..+   .|+++++++||.|.++..... ...... ......+      ...+.+++|+
T Consensus       176 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~------~~~~~~~edv  246 (272)
T 4e3z_A          176 --TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSVP------MQRAGMPEEV  246 (272)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCT------TSSCBCHHHH
T ss_pred             --CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcCC------cCCCcCHHHH
Confidence              112347 7777777665544443   389999999999998743210 000000 1111112      2235789999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCC
Q 020254          235 VNLIYEALSNPS---YRGVINGTAP  256 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~  256 (328)
                      |++++.++....   .+.+|++.+|
T Consensus       247 A~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          247 ADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCCccccccCCEEeecCC
Confidence            999999986543   3448999876

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.84  E-value=1.1e-20  Score=158.54  Aligned_cols=217  Identities=15%  Similarity=0.107  Sum_probs=145.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      ...++++||||+|+||+++++.|+++|++|++++|+..+....... ........+|+.|.++++++++       ++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457999999999999999999999999999999987654433211 1111244679999988877764       7999


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |||+||....   .....+.++..+++|+.++..+.+++...  +.+..++|++||...  +...         +....|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~--~~~~---------~~~~~Y  173 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVG--VVGN---------PGQTNY  173 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHH--cCCC---------CCchhH
Confidence            9999997533   23445778889999999966666655331  145678999999765  3211         223457


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|...+.....++.+   .|+++.+++||.+.++....   +....  ......|+      ..+.+++|+|++++.+
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~------~r~~~~edvA~~v~~L  244 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK---LNEKQKEAIMAMIPM------KRMGIGEEIAFATVYL  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT---CCHHHHHHHHTTCTT------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc---cCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence             7777666555544433   48999999999998763211   11111  22223332      2367899999999999


Q ss_pred             hhCCC---CCceEEecCCC
Q 020254          242 LSNPS---YRGVINGTAPN  257 (328)
Q Consensus       242 ~~~~~---~~g~~~i~~~~  257 (328)
                      +....   .+.++++.+|.
T Consensus       245 ~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          245 ASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCccccCccCCEEEECCCe
Confidence            87543   34489998875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.84  E-value=2.1e-20  Score=157.26  Aligned_cols=220  Identities=14%  Similarity=-0.020  Sum_probs=148.1

Q ss_pred             cCCCeEEEEcCCc-hhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ...++|+||||+| .||++++++|+++|++|++++|+..+.....    ... ....+..+|+.|.++++++++      
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            3467899999998 5999999999999999999999876533221    111 111245679999888877664      


Q ss_pred             -CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CC-CCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                       ++|+|||+||.....   ....+.++..+++|+.++.++++++...  +. +..++|++||...  +..         .
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~  168 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLG--WRA---------Q  168 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGG--TCC---------C
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHH--cCC---------C
Confidence             689999999975432   3456778899999999999999887652  12 4567999998765  321         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      +....| .+|...+.....++.+   .++++.+++||.+.++....... -.....     +........+.+++|+|++
T Consensus       169 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~-----~~~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          169 HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDR-----LASDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------CCTTSSCCCHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHH-----HHhcCCcCCCCCHHHHHHH
Confidence            234567 7787777766555443   58999999999998774211100 000000     1111222347899999999


Q ss_pred             HHHHhhCCC---CCceEEecCCC
Q 020254          238 IYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++.++....   .+.++++.+|.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            999987533   34488888764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.84  E-value=3.8e-20  Score=157.20  Aligned_cols=217  Identities=13%  Similarity=0.092  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhc-------CCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~   90 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++.+.....    ..........+|+.|.+++++++       .++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3578999999999999999999999999999888765433211    11111124457999988887776       378


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |+|||+||....   .....+.++..+++|+.++.++++++...  ..+.+++|++||...  +...         +...
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~  191 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG--LTGN---------VGQA  191 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHCC---------TTCH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhh--ccCC---------CCCc
Confidence            999999997533   23456778899999999987777776531  135679999999865  3221         2234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .| .+|...+.....+..+   .+++++++|||.+.++...... ....  ......+.      ..+++++|+|++++.
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPA------GRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTT------SSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHH--HHHhhCCC------CCCCCHHHHHHHHHH
Confidence            57 6777666555444332   4899999999999887432211 1111  11122222      237899999999999


Q ss_pred             HhhCCC---CCceEEecCCC
Q 020254          241 ALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~  257 (328)
                      ++..+.   .+.++++.+|.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            987543   34488888774

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.1e-20  Score=159.41  Aligned_cols=224  Identities=13%  Similarity=0.015  Sum_probs=151.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.+++|||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.++++++++       ++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999987654332211 1111244679999988876664       78999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+.++..+++|+.++..+++++...  ..+..++|++||...  +..         .+....| 
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y~  176 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG--QVA---------VGGTGAYG  176 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSC---------CTTBHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccC---------CCCchhHH
Confidence            999997543   24556788899999999998888877542  135568999999765  321         1223467 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHH-HHHHHcCCCCCC---CCcccccccHHHHHHHHHH
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIP-LFMMFAGGPLGS---GQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~  240 (328)
                      .+|...+.....++.+   .|+++.+++||.+.++.......... ..    ......   ......+.+++|+|++++.
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~r~~~pedvA~~v~~  252 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGAL----GAGGARSMIARLQGRMAAPEEMAGIVVF  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC----------CCHHHHHHHHHSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhH----HHHhhhhhhhccccCCCCHHHHHHHHHH
Confidence            7777766666544433   58999999999998863111000000 00    000000   0001236889999999999


Q ss_pred             HhhCCC---CCceEEecCCCccC
Q 020254          241 ALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++....   .+.++++.+|...+
T Consensus       253 L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          253 LLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HcCCccCCccCcEEEECCcchhc
Confidence            987543   34499998886544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=5.3e-21  Score=160.96  Aligned_cols=226  Identities=15%  Similarity=0.119  Sum_probs=145.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CCC--CCccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|+..+....    ...  ........+|+.|+++++++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999999999986543211    110  1111234579999888877664       


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHH----HHHHhcCC-CCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKV----VDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||..     ..+.++..+++|+.++..+    ++.+++.+ ....++|++||...  +...         +.
T Consensus        86 ~id~lv~~Ag~~-----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  149 (267)
T 2gdz_A           86 RLDILVNNAGVN-----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMPV---------AQ  149 (267)
T ss_dssp             CCCEEEECCCCC-----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSCC---------TT
T ss_pred             CCCEEEECCCCC-----ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc--cCCC---------CC
Confidence            589999999964     2345678889999865554    44444410 12578999999876  4421         22


Q ss_pred             CCch-HHHHHHHHHHHHh-----cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcC--CCCCCCCcccccccHHHHH
Q 020254          164 GNDY-LAEVCREWEGTAL-----KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG--GPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~-----~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~D~a  235 (328)
                      ...| .+|...+.....+     ....++++++++||.+.++........ ........  ..+........+++++|+|
T Consensus       150 ~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  228 (267)
T 2gdz_A          150 QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHIKDMIKYYGILDPPLIA  228 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHHHHHHHHHCCBCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-cccchhhhHHHHHHHHhccccCCCHHHHH
Confidence            3457 6776666554432     123589999999999977631110000 00000000  0000000113478999999


Q ss_pred             HHHHHHhhCCCCCc-eEEecCCCccCHHHH
Q 020254          236 NLIYEALSNPSYRG-VINGTAPNPVRLAEM  264 (328)
Q Consensus       236 ~~~~~~~~~~~~~g-~~~i~~~~~~~~~e~  264 (328)
                      ++++.++......| ++++.+++.+++.|+
T Consensus       229 ~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          229 NGLITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             HHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            99999998765444 999999887776553

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=2.2e-20  Score=157.33  Aligned_cols=223  Identities=12%  Similarity=0.046  Sum_probs=149.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ..+++++||||+|+||++++++|+++|++|++++++.... ...    ........+..+|+.|.++++++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4457899999999999999999999999999998654332 111    1111111245679999888877664       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||.....   ....+.++..+++|+.++.++++++...  ..+..++|++||...  +...         +.
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  171 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG--SRGA---------FG  171 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHCC---------TT
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhh--ccCC---------CC
Confidence            799999999975432   3456778899999999999988877531  134568999999765  3221         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....+..+   .|+++.+++||.+.++.....   ....   ....+........+..++|+|++++
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~---~~~~~~~~~~~~~~~~p~dvA~~v~  245 (269)
T 3gk3_A          172 QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV---PQDV---LEAKILPQIPVGRLGRPDEVAALIA  245 (269)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------CCSGGGCTTSSCBCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh---chhH---HHHHhhhcCCcCCccCHHHHHHHHH
Confidence            3457 7777666665544433   489999999999988753221   1100   0001111111234678999999999


Q ss_pred             HHhhCCC---CCceEEecCCCccC
Q 020254          240 EALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      .++....   .+.++++.+|..++
T Consensus       246 ~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          246 FLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HHhCCCcCCeeCcEEEECCCEeCc
Confidence            9987654   34499999886543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.84  E-value=3.9e-20  Score=156.30  Aligned_cols=219  Identities=13%  Similarity=0.060  Sum_probs=148.8

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++|+||||+  |+||+++++.|+++|++|++++|+..   ....+...........+|+.|.++++++++       +
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999  99999999999999999999999875   111111100001245679999888877664       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+||....       .....+.++..+++|+.++..+++++........++|++||...  +..         .+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  153 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS--TKY---------MA  153 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------CT
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchh--cCC---------CC
Confidence            8999999997532       14456778899999999999999999873111358999999765  321         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....++.+   .|+++++++||.+.++........-... ......|++      .+.+++|+|++
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~------~~~~p~dva~~  227 (275)
T 2pd4_A          154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR------KNVSLEEVGNA  227 (275)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcC------CCCCHHHHHHH
Confidence            23457 7777766665554443   4899999999999987532211111111 111122221      25789999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCCC
Q 020254          238 IYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++.++....  ..| ++++.++.
T Consensus       228 ~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          228 GMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCccccCCCCCEEEECCCc
Confidence            999986532  234 88887775

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=1.4e-20  Score=155.39  Aligned_cols=203  Identities=15%  Similarity=0.093  Sum_probs=142.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---------CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d~v   93 (328)
                      .|+|+||||+|+||++++++|+++|++|++++|++......      .....+|+.|.++++++++         ++|+|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS------NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE------EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccc------cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            46899999999999999999999999999999987653321      1144679998887776653         78999


Q ss_pred             EECCCCCCCC----CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           94 VNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        94 i~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      ||+||.....    ....+.++..+++|+.++..+++++........++|++||...  +..         .+....| .
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  145 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA--MGP---------TPSMIGYGM  145 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh--ccC---------CCCcHHHHH
Confidence            9999975332    2335667888999999999999988762112358999999876  421         1233457 7


Q ss_pred             HHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          169 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      +|...+.....+..+     .+++++++|||.+.++..       ...   ...     .....++.++|+|++++.++.
T Consensus       146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-------~~~---~~~-----~~~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-------RKW---MPN-----ADHSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-------HHH---STT-----CCGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-------hhc---CCC-----ccccccCCHHHHHHHHHHHHc
Confidence            777777666655543     369999999999877621       100   010     112346788999999997774


Q ss_pred             CCC----CCceEEecCCC
Q 020254          244 NPS----YRGVINGTAPN  257 (328)
Q Consensus       244 ~~~----~~g~~~i~~~~  257 (328)
                      .+.    .+..+++.++.
T Consensus       211 s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          211 ETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             CGGGCCCTTCEEEEEEET
T ss_pred             CCCcccccccEEEEecCC
Confidence            322    24477776654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.84  E-value=5.7e-20  Score=155.11  Aligned_cols=220  Identities=15%  Similarity=0.082  Sum_probs=153.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      ..+++|||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.++++++++       ++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998765433221    11111245689999998887775       79


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||.....   ....+.++..+++|+.++..+++++...  +.+ ..++|++||...  +....       .+..
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~--~~~~~-------~~~~  181 (276)
T 3r1i_A          111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG--HIINI-------PQQV  181 (276)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSCCC-------SSCC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHh--cccCC-------CCCc
Confidence            9999999975432   3456778888999999999998887652  012 367999998765  32110       0123


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ..| .+|...+.....++.+   .++++.+++||.|..+...........+  ....|+      ..+..++|+|++++.
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~p~------~r~~~pedvA~~v~f  253 (276)
T 3r1i_A          182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALW--EPKIPL------GRMGRPEELTGLYLY  253 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHH--GGGSTT------SSCBCGGGSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHH--HhcCCC------CCCcCHHHHHHHHHH
Confidence            457 7787777766555544   4899999999999988643332222211  122232      236789999999999


Q ss_pred             HhhCCC---CCceEEecCCCc
Q 020254          241 ALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~  258 (328)
                      ++....   .+.++++.+|..
T Consensus       254 L~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          254 LASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HcCccccCccCcEEEECcCcc
Confidence            987533   344888887753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.83  E-value=7.4e-20  Score=153.13  Aligned_cols=219  Identities=18%  Similarity=0.105  Sum_probs=148.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc--ccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .++++||||+|+||++++++|+++|++|++++|++..  .....    ..........+|+.|.++++++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999998765  22211    111111244579999888877764       7


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-CcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||.....   ....+.+...+++|+.++.++++++.+.  +.+. .++|++||...  +..         .+.
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  150 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAA--IQG---------FPI  150 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGG--TSC---------CTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchh--ccC---------CCC
Confidence            99999999975332   3456778899999999999998887652  1244 78999999875  332         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhh--------HHHH-HHHcCCCCCCCCcccccc
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKM--------IPLF-MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~--------~~~~-~~~~~~~~~~~~~~~~~i  229 (328)
                      ...| .+|...+.....+..+   .++++++++||.+.++.... ...+        -... ......|+      ..+.
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~  224 (258)
T 3a28_C          151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL------GRPS  224 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTT------SSCB
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCC------CCcc
Confidence            3467 7777666655544432   48999999999997653111 0000        0001 11111121      2378


Q ss_pred             cHHHHHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          230 HLDDIVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +++|+|++++.++....   .+.++++.+|..
T Consensus       225 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          225 VPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             CHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            99999999999987542   344888887754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.83  E-value=7.1e-20  Score=156.17  Aligned_cols=222  Identities=12%  Similarity=0.022  Sum_probs=154.8

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++++||||+|  +||+++++.|+++|++|++++|+.........   ......+..+|+.|.++++++++       +
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999998  99999999999999999999998643221110   00001245689999988887764       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+||....       .....+.+...+++|+.++..+++++........++|++||...  +..         .+
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~--~~~---------~~  177 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA--EKV---------VP  177 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG--TSC---------CT
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh--ccC---------CC
Confidence            8999999997531       24566788999999999999999999874223458999999875  321         22


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....++.+   .++++.+++||.|.++........-... ......|++      .+..++|+|++
T Consensus       178 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~------r~~~pedvA~~  251 (296)
T 3k31_A          178 HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLR------RNTTLDDVGGA  251 (296)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTS------SCCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCC------CCCCHHHHHHH
Confidence            34567 7777776666555443   4899999999999987543222111111 111222322      25789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccC
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++.++....   .+.++++.+|..+.
T Consensus       252 v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          252 ALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHcCCccCCccCCEEEECCCcccc
Confidence            999987532   34499998886443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.83  E-value=3.6e-20  Score=157.68  Aligned_cols=222  Identities=11%  Similarity=0.022  Sum_probs=150.4

Q ss_pred             cCCCeEEEEcCCch--hHHHHHHHHHhCCCeEEEEecCCCccccc---CCCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++++||||+|+  ||+++++.|+++|++|++++|+.......   ........+..+|+.|.++++++++       
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            34578999999988  99999999999999999999985321111   0000011244679999988877764       


Q ss_pred             CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      ++|++||+||....       .....+.+...+++|+.++..+++++........++|++||...  +..         .
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~---------~  177 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA--EKV---------M  177 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG--TSB---------C
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh--ccC---------C
Confidence            78999999997531       24556788899999999999999998763223458999999876  332         2


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....++.+   .|+++.+++||.+.++........-... ......|+      ..+..++|+|+
T Consensus       178 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~  251 (293)
T 3grk_A          178 PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTIDEVGD  251 (293)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT------SSCCCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            234567 7787777666555443   4899999999999987432211111111 11122232      22678999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCcc
Q 020254          237 LIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      +++.++....   .+.++++.+|..+
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          252 VGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHcCccccCCcceEEEECCCccc
Confidence            9999987533   3449999888644

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.83  E-value=5.8e-20  Score=151.62  Aligned_cols=198  Identities=18%  Similarity=0.165  Sum_probs=140.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +++++||||+|+||++++++|+++|++|++++|+..+.......     .....+..+|+.|+++++++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999987653322110     1111244679999998888876       78


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      |++||+||.....   ....+.++..+++|+.++.++++++... ..+..++|++||+... ++          .+....
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~-~~----------~~~~~~  150 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA-RL----------IPYGGG  150 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS-SC----------CTTCHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhc-cc----------CCCcch
Confidence            9999999975432   3466788899999999999999988642 1134567777776641 22          122345


Q ss_pred             h-HHHHHHHHHHHHhccc-CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          167 Y-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      | .+|...+.....+..+ .++++.+++||.+..+.....               ........++.++|+|++++.++..
T Consensus       151 Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~---------------~~~~~~~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          151 YVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK---------------PGKPKEKGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC---------------SCCCGGGTCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc---------------CCcccccCCCCHHHHHHHHHHHHcC
Confidence            7 7777766665554333 489999999999877632111               0111122578999999999999988


Q ss_pred             CC
Q 020254          245 PS  246 (328)
Q Consensus       245 ~~  246 (328)
                      +.
T Consensus       216 ~~  217 (235)
T 3l77_A          216 PK  217 (235)
T ss_dssp             CT
T ss_pred             CC
Confidence            66

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.83  E-value=4.9e-21  Score=161.89  Aligned_cols=223  Identities=14%  Similarity=0.073  Sum_probs=152.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.++++||||+|+||++++++|+++|++|++++|+..+.......     ........+|+.|.++++++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567999999999999999999999999999999987543222110     1111244679999988877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +.
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  173 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLG--NRGQ---------AL  173 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHH--HHTC---------TT
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--CCCC---------CC
Confidence            79999999996433   23456788999999999999999987531  134568999999875  3221         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-chhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ...| .+|...+.....++.+   .|+++.+++||.|.++... ......... ......|++      .+..++|+|++
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~------r~~~p~dvA~~  247 (277)
T 4fc7_A          174 QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQ------RLGNKTEIAHS  247 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTS------SCBCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCC------CCcCHHHHHHH
Confidence            3457 6777666665555443   4899999999999986310 000000111 222233332      36789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccC
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++.++....   .+.++++.+|..++
T Consensus       248 v~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          248 VLYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHcCCccCCcCCCEEEECCCcccC
Confidence            999987533   34499998876443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.83  E-value=3.1e-20  Score=157.18  Aligned_cols=228  Identities=13%  Similarity=0.034  Sum_probs=151.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc------------ccc----CCCCCccccCceeecCChhhH
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------ELI----FPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~----~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      ...+++|||||+|+||+++++.|+++|++|++++|+....            ...    ........+..+|+.|.++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            3457999999999999999999999999999999973211            000    000111124467999999888


Q ss_pred             hhcC-------CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--C-CCCCcEEEEecccceeecCCCc
Q 020254           85 DCIQ-------GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSET  154 (328)
Q Consensus        85 ~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~Ss~~v~~yg~~~~  154 (328)
                      ++++       ++|++||+||...... ..+.+...+++|+.++..+++++...  + ....++|++||...  +.... 
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~-  166 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSA-GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG--LAGVG-  166 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSS-THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TSCCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh--cCCCc-
Confidence            7765       7999999999754333 56788999999999999999987542  0 22468999999875  32110 


Q ss_pred             ccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch--hhhHHHHHHHcCC--CCCCCCccc
Q 020254          155 EVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGG--PLGSGQQWF  226 (328)
Q Consensus       155 ~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~  226 (328)
                          ...+....| .+|...+.....+..+   .++++.+++||.|.++.....  .............  .+..... .
T Consensus       167 ----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          167 ----SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             ----CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             ----cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence                011122357 7777666665554433   479999999999998854321  1111111111111  1122222 5


Q ss_pred             ccccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          227 SWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      .+++++|+|++++.++....   .+.++++.+|.
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            68899999999999986543   34489998875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.83  E-value=5.8e-21  Score=164.94  Aligned_cols=232  Identities=19%  Similarity=0.095  Sum_probs=159.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC----------CCcccccC----CCCCccccCceeecCChhhHhh
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS----------RSKAELIF----PGKKTRFFPGVMIAEEPQWRDC   86 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~   86 (328)
                      ...+++|||||+|+||+++++.|+++|++|++++|+          ........    ..........+|+.|.++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            445789999999999999999999999999999987          22211111    1111112446799998888777


Q ss_pred             cC-------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCC--------CCCCcEEEEeccccee
Q 020254           87 IQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--------EGVRPSVLVSATALGY  148 (328)
Q Consensus        87 ~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~~v~~Ss~~v~~  148 (328)
                      ++       ++|++||+||....   .....+.++..+++|+.++..+++++....        ....++|++||...  
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--  182 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG--  182 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH--
Confidence            64       79999999997543   234567888999999999999988875420        11248999999765  


Q ss_pred             ecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHHHHHHHcCCCCCCCC
Q 020254          149 YGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQ  223 (328)
Q Consensus       149 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~  223 (328)
                      +...         +....| .+|...+.....++.+   .|+++.+++|| +..+.... .....           ....
T Consensus       183 ~~~~---------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-----------~~~~  241 (322)
T 3qlj_A          183 LQGS---------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-----------ATQD  241 (322)
T ss_dssp             HHCB---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-----------------
T ss_pred             ccCC---------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-----------hccc
Confidence            3211         223467 7787777666555544   58999999999 65442211 11100           0111


Q ss_pred             cccccccHHHHHHHHHHHhhCCC---CCceEEecCCCcc-----------------CHHHHHHHHHHHhCCC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV-----------------RLAEMCDHLGNVLGRP  275 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~-----------------~~~e~~~~i~~~~g~~  275 (328)
                      ..+.++.++|+|.+++.++....   .+.++++.+|...                 +..|+++.+.+.+|.+
T Consensus       242 ~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          242 QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             --CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence            22346789999999999986543   3448888887644                 7799999999998854

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.83  E-value=1.4e-19  Score=148.70  Aligned_cols=214  Identities=15%  Similarity=0.106  Sum_probs=150.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      |.|+||||||++.||+++++.|++.|++|++++|++....+............+|+.|+++++++++       ++|++|
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3478999999999999999999999999999999877655554443333355689999988876653       789999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      |+||....   .+...+.++..+++|+.++..+.+++.+. ..+..++|++||...  +..         .|....| .+
T Consensus        81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~--~~~---------~~~~~~Y~as  149 (247)
T 3ged_A           81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA--FQS---------EPDSEAYASA  149 (247)
T ss_dssp             ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG--TSC---------CTTCHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc--ccC---------CCCCHHHHHH
Confidence            99997543   34567889999999999998887776542 123468999999765  221         1223457 66


Q ss_pred             HHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          170 EVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       170 k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                      |.........++.+  .++++..+.||.+-.+...   .+...  .....|++.      +..++|+|.+++.++...-.
T Consensus       150 Kaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~---~~~~~--~~~~~Pl~R------~g~pediA~~v~fL~s~~~i  218 (247)
T 3ged_A          150 KGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ---EFTQE--DCAAIPAGK------VGTPKDISNMVLFLCQQDFI  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------CCHH--HHHTSTTSS------CBCHHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH---HHHHH--HHhcCCCCC------CcCHHHHHHHHHHHHhCCCC
Confidence            76665555444332  3899999999998766432   11111  122334332      56789999999999975444


Q ss_pred             Cc-eEEecCCC
Q 020254          248 RG-VINGTAPN  257 (328)
Q Consensus       248 ~g-~~~i~~~~  257 (328)
                      .| ++.+.+|-
T Consensus       219 TG~~i~VDGG~  229 (247)
T 3ged_A          219 TGETIIVDGGM  229 (247)
T ss_dssp             CSCEEEESTTG
T ss_pred             CCCeEEECcCH
Confidence            44 88887774

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.83  E-value=2e-20  Score=158.54  Aligned_cols=217  Identities=14%  Similarity=0.043  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++|+||||+|+||++++++|+++|++|++++|+..........    .....+..+|+.|.++++++++       ++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999999987653322110    1111244579999888877764       49


Q ss_pred             cEEEECCCCCCC-C----CCChhHHHHHHHhhhhh----HHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           91 TAVVNLAGTPIG-T----RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        91 d~vi~~a~~~~~-~----~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      |+|||+||.... .    ....+.+...+++|+.+    ++.+++.+++  .+.+++|++||...  +...       ..
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~~-------~~  181 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK--NGKGSLIITSSISG--KIVN-------IP  181 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCCTT--SCC----------
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEECchHh--ccCC-------CC
Confidence            999999996432 1    33456678899999999    5677777776  56789999999875  3220       01


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|...+.....+..+   .+ ++++++||.+.++..... ......+  ....|.      ..+++++|+|+
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~p~------~~~~~~~dvA~  252 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKW--WQLTPL------GREGLTQELVG  252 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHH--HHHSTT------CSCBCGGGTHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHH--HHhCCc------cCCcCHHHHHH
Confidence            223457 7777777766655443   36 999999999988743211 1111111  111222      23789999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCCc
Q 020254          237 LIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      +++.++....   .+.++++.+|..
T Consensus       253 ~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          253 GYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCccccCccCCEEEECCCee
Confidence            9999987532   344899988753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.83  E-value=1.5e-20  Score=160.18  Aligned_cols=225  Identities=14%  Similarity=0.015  Sum_probs=149.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC---CCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ---GSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~   96 (328)
                      ...++|+||||+|+||++++++|+++|++|++++|+..+........ ....+..+|+.|.++++++++   ++|+|||+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            34579999999999999999999999999999999976654433221 112245689999999988876   67999999


Q ss_pred             CCCCCC-CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC-cccccCC-CC--CCCch-HHH
Q 020254           97 AGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDES-SP--SGNDY-LAE  170 (328)
Q Consensus        97 a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~-~~~~~e~-~~--~~~~y-~~k  170 (328)
                      ||.... .....+.++..+++|+.++..+++++..  ...+++|++||...  +.... .....+. .+  +...| .+|
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~--~~~~riv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~Y~~sK  169 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP--RLTDRVVTVSSMAH--WPGRINLEDLNWRSRRYSPWLAYSQSK  169 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGG--GEEEEEEEECCGGG--TTCCCCSSCTTCSSSCCCHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhheeEeechhh--ccCCCCcccccccccCCCCcchHHHHH
Confidence            997532 2234566788999999999999999998  45569999999876  43221 1111111 22  22356 777


Q ss_pred             HHHHHHHHHhccc---CC--CeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          171 VCREWEGTALKVN---KD--VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ...+.....++.+   .+  +++.+++||.|..+-........  .......     ...+-...++|+|++++.++..+
T Consensus       170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~A~~~~~l~~~~  242 (291)
T 3rd5_A          170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL--GDALMSA-----ATRVVATDADFGARQTLYAASQD  242 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH--HHHHHHH-----HHHHHhCCHHHHHHHHHHHHcCC
Confidence            7766665554443   24  99999999999776432111000  0000011     11122346999999999999886


Q ss_pred             CCCc-eEEecCC
Q 020254          246 SYRG-VINGTAP  256 (328)
Q Consensus       246 ~~~g-~~~i~~~  256 (328)
                      ...| .+.+.+|
T Consensus       243 ~~~G~~~~vdgG  254 (291)
T 3rd5_A          243 LPGDSFVGPRFG  254 (291)
T ss_dssp             CCTTCEEEETTS
T ss_pred             CCCCceeCCccc
Confidence            5555 6666544

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.83  E-value=2.5e-20  Score=154.83  Aligned_cols=218  Identities=17%  Similarity=0.084  Sum_probs=149.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..++++||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.++++++++       ++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            457999999999999999999999999999999987654332111 1111245689999988887764       79999


Q ss_pred             EECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           94 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        94 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||+||.....   ....+.++..+++|+.++..+.+++...  +.+ ..++|++||...  +...         +....|
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  153 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTF--FAGT---------PNMAAY  153 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH--HHTC---------TTCHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhh--ccCC---------CCchhh
Confidence            9999975332   3456778899999999999998884331  023 568999999775  3321         233467


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                       .+|...+.....++.+   .|+++.+++||.+.++..... ......... ...++      ..+..++|+|+++..++
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~------~r~~~pedva~~v~~L~  226 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVE-MLQAM------KGKGQPEHIADVVSFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHH-HHSSS------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHh-ccccc------CCCcCHHHHHHHHHHHh
Confidence             7776666665555443   589999999999987631110 011111100 00122      22578999999999998


Q ss_pred             hCCC---CCceEEecCCC
Q 020254          243 SNPS---YRGVINGTAPN  257 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~  257 (328)
                      ....   .+.++++.+|.
T Consensus       227 s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          227 SDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CccccCCCCCEEEECCCc
Confidence            7643   34488888774

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=1.9e-20  Score=158.66  Aligned_cols=221  Identities=16%  Similarity=0.100  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCC---ccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|+..+.....    ....   ......+|+.|+++++++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999875433221    1110   11244579999888877664      


Q ss_pred             -CCcEEEECCCCCCCC-------CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccccc
Q 020254           89 -GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                       ++|+|||+||.....       ....+.++..+++|+.++.++++++...  +.+ .++|++||...  +...      
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~~------  155 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA--GPQA------  155 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG--SSSC------
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc--cCCC------
Confidence             789999999975321       3345778899999999999999887652  123 78999999876  4321      


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch---hh----hHHHHHHH-cCCCCCCCCccc
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AK----MIPLFMMF-AGGPLGSGQQWF  226 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~---~~----~~~~~~~~-~~~~~~~~~~~~  226 (328)
                        .+....| .+|...+.....++.   ..|+++++++||.+.++.....   ..    ........ ...|      ..
T Consensus       156 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~  227 (280)
T 1xkq_A          156 --QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP------IG  227 (280)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT------TS
T ss_pred             --CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCC------CC
Confidence              1233457 777776666555543   3589999999999998742111   00    00011111 1111      12


Q ss_pred             ccccHHHHHHHHHHHhhCC---C-CCceEEecCCCcc
Q 020254          227 SWIHLDDIVNLIYEALSNP---S-YRGVINGTAPNPV  259 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~---~-~~g~~~i~~~~~~  259 (328)
                      .+.+++|+|++++.++..+   . .+.++++.+|...
T Consensus       228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          228 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            4789999999999998653   2 3448999887543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.83  E-value=2e-20  Score=156.25  Aligned_cols=210  Identities=11%  Similarity=0.004  Sum_probs=143.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCc--ccccCCC--CCccccCceeecCC-hhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEE-PQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~~~-~~~~~~~~-------   88 (328)
                      +.|+|+||||+|+||++++++|+++|++ |++++|+...  ..++...  .....+..+|+.|+ ++++++++       
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999996 9999998742  1111100  11112345799998 77766654       


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC---CCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~---~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||..     ..+.++..+++|+.++.++++++...  +.+   ..++|++||...  +...         +.
T Consensus        84 ~id~lv~~Ag~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  147 (254)
T 1sby_A           84 TVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAI---------HQ  147 (254)
T ss_dssp             CCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSCC---------TT
T ss_pred             CCCEEEECCccC-----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh--ccCC---------CC
Confidence            799999999963     34567889999999999999988652  011   357999999876  4321         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhH---HHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMI---PLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ...| .+|...+.....++.+   .++++++++||.+.++.......+.   ... .....         .++.+++|+|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA  218 (254)
T 1sby_A          148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS---------HPTQTSEQCG  218 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT---------SCCEEHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc---------CCCCCHHHHH
Confidence            3457 7777776666555443   4899999999999987321100000   000 11111         1245899999


Q ss_pred             HHHHHHhhCCCCCceEEecCC
Q 020254          236 NLIYEALSNPSYRGVINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~~~g~~~i~~~  256 (328)
                      ++++.++.....+.+|++.+|
T Consensus       219 ~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          219 QNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHCCTTCEEEEETT
T ss_pred             HHHHHHHHcCCCCCEEEEeCC
Confidence            999999875544558999887

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.83  E-value=1e-19  Score=153.05  Aligned_cols=222  Identities=9%  Similarity=0.022  Sum_probs=152.2

Q ss_pred             cCCCeEEEEcCCch--hHHHHHHHHHhCCCeEEEEecCCCcccccC---CC-CC-ccccCceeecCChhhHhhcC-----
Q 020254           21 ASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELIF---PG-KK-TRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~-~~-~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      .+.++++||||+|+  ||++++++|+++|++|++++|+........   .. .. ...+..+|+.|.++++++++     
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            34578999999988  999999999999999999999854322111   00 00 11245689999998887764     


Q ss_pred             --CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 --GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                        ++|++||+||....       .....+.+...+++|+.++..+++++........++|++||...  +..        
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~--------  154 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG--ELV--------  154 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG--TSC--------
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc--ccc--------
Confidence              68999999997531       23456778889999999999999999874223458999999875  322        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                       .+....| .+|...+.....++.+   .|+++.+++||.+.++........-... ......++      ..+..++|+
T Consensus       155 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~dv  227 (266)
T 3oig_A          155 -MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL------RRTTTPEEV  227 (266)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT------SSCCCHHHH
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC------CCCCCHHHH
Confidence             2233457 7777766665554443   4899999999999886432211111111 11112222      236789999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCCcc
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      |++++.++....   .+.++++.+|...
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence            999999987533   3448999887543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.83  E-value=7.2e-20  Score=157.79  Aligned_cols=212  Identities=15%  Similarity=0.108  Sum_probs=138.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cccC----CCCCccccCceeecCChhhHhhcC-----
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      +++|+||||+|+||+++++.|+++|++|++.+|+....     ..+.    ..........+|+.|.++++++++     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999974221     1100    000111244679999988887775     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHH----hcCCCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                        ++|+|||+||....   .....+.+...+++|+.++.++++++    ++  .+..++|++||.+.  +...       
T Consensus        85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~--~~~g~iV~isS~~~--~~~~-------  153 (324)
T 3u9l_A           85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR--QKHGLLIWISSSSS--AGGT-------  153 (324)
T ss_dssp             HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC-------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEecchh--ccCC-------
Confidence              89999999997532   23456778889999999999999988    44  46678999999876  4211       


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-----hhhHHHHHHHcCCCCCCCCc------
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-----AKMIPLFMMFAGGPLGSGQQ------  224 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~------  224 (328)
                       .+....| .+|...+.....+..+   .|+++++++||.+.++.....     ...............+.++.      
T Consensus       154 -~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (324)
T 3u9l_A          154 -PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFA  232 (324)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHH
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHH
Confidence             1123457 7787777776665554   589999999999986532110     00000000000000000000      


Q ss_pred             --ccccccHHHHHHHHHHHhhCCC
Q 020254          225 --WFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       225 --~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                        ..+..+++|+|++++.++..+.
T Consensus       233 ~l~~~~~~p~~vA~aiv~~~~~~~  256 (324)
T 3u9l_A          233 AIVPPDADVSLVADAIVRVVGTAS  256 (324)
T ss_dssp             HTSCTTCCTHHHHHHHHHHHTSCT
T ss_pred             HhcCCCCCHHHHHHHHHHHhcCCC
Confidence              0112688999999999998874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.83  E-value=1e-19  Score=153.07  Aligned_cols=211  Identities=13%  Similarity=0.093  Sum_probs=146.9

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC-----
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      ..++++|+||||+|+||++++++|+++|   ++|++++|+......+..   ......+..+|+.|.++++++++     
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            3456799999999999999999999999   999999998765332211   00111244679999998887775     


Q ss_pred             ----CCcEEEECCCCCC-C---CCCChhHHHHHHHhhhhhHHHHHHHHhcCC--C------C-----CCcEEEEecccce
Q 020254           89 ----GSTAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E------G-----VRPSVLVSATALG  147 (328)
Q Consensus        89 ----~~d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~------~-----~~~~v~~Ss~~v~  147 (328)
                          ++|+|||+||... .   .....+.....+++|+.++.++++++....  .      +     ..++|++||... 
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-  176 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG-  176 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG-
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc-
Confidence                7999999999753 1   234567778899999999999999886520  1      1     468999999876 


Q ss_pred             eecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCC
Q 020254          148 YYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQ  223 (328)
Q Consensus       148 ~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  223 (328)
                       +....      ..++...| .+|...+.....++.+   .+++++++|||.|..+....                    
T Consensus       177 -~~~~~------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------  229 (267)
T 1sny_A          177 -SIQGN------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------------  229 (267)
T ss_dssp             -CSTTC------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------------
T ss_pred             -cccCC------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------------
Confidence             44221      11233457 7777776666554443   48999999999987763210                    


Q ss_pred             cccccccHHHHHHHHHHHhhCCC--CCceEEecCCCccC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  260 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~~--~~g~~~i~~~~~~~  260 (328)
                        ..++.++|+|+.++.++....  ..|.|...++..+.
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  266 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLA  266 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBCC
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCcC
Confidence              125788999999999998643  35544444444343

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.83  E-value=8.9e-20  Score=151.95  Aligned_cols=206  Identities=12%  Similarity=0.066  Sum_probs=134.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhcC------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~------~~d   91 (328)
                      ..++++||||+|+||+++++.|+++|++|++++|+..+.......    .....+..+|+.|.++++++++      ++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            457899999999999999999999999999999987764433211    1111245689999998887775      689


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ++||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+....
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~  154 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS--LRG---------GSGFAA  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG--TCC---------CTTCHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHH--cCC---------CCCCcc
Confidence            99999997543   23556788899999999998888877431  134568999999775  321         122345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeE-EEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRL-ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~-~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      | .+|...+.....++.+   .|+++ .+++||.+..+.....   .+...    .......... +..++|+|++++.+
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~~~~----~~~~~~~~~~-~~~pedvA~~~~~l  226 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---REQMF----GKDALANPDL-LMPPAAVAGAYWQL  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---chhhh----hhhhhcCCcc-CCCHHHHHHHHHHH
Confidence            7 7777666665554443   48999 8999999987642111   11000    0011111122 89999999999999


Q ss_pred             hhCCC
Q 020254          242 LSNPS  246 (328)
Q Consensus       242 ~~~~~  246 (328)
                      +..+.
T Consensus       227 ~s~~~  231 (252)
T 3h7a_A          227 YQQPK  231 (252)
T ss_dssp             HHCCG
T ss_pred             HhCch
Confidence            98765

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.83  E-value=2.4e-20  Score=157.38  Aligned_cols=229  Identities=13%  Similarity=0.050  Sum_probs=154.9

Q ss_pred             ccCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcC------
Q 020254           20 KASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        20 ~~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ....++|+||||+  |+||++++++|+++|++|++++|+........   .......+..+|+.|.++++++++      
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4456899999999  99999999999999999999999853322111   000111245689999988877764      


Q ss_pred             -CCcEEEECCCCCCC-------C-CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 -GSTAVVNLAGTPIG-------T-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 -~~d~vi~~a~~~~~-------~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                       ++|++||+||....       . ....+.+...+++|+.++..+++++........++|++||...  +..        
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~--------  160 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA--ERA--------  160 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB--------
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc--ccC--------
Confidence             68999999997532       1 2566788999999999999999999773112457999999775  321        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                       .+....| .+|...+.....++.+   .|+++.+++||.|..+........-... ......++      ..+..++|+
T Consensus       161 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~pedv  233 (271)
T 3ek2_A          161 -IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL------KRNVTIEQV  233 (271)
T ss_dssp             -CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT------SSCCCHHHH
T ss_pred             -CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc------CCCCCHHHH
Confidence             2234567 7777777666555443   4899999999999987533221111111 11122222      236789999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCCccCHHHHH
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPNPVRLAEMC  265 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~~~~~~e~~  265 (328)
                      |++++.++....   .+.++++.+|...+..++.
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            999999987532   3449999999877765553

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.83  E-value=1.7e-20  Score=156.47  Aligned_cols=220  Identities=13%  Similarity=0.061  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+|+||||+|+||++++++|+++|++|++++|+..+....... .....+..+|+.|.++++++++       ++|+|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999987543322110 0111244679999888776664       57999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+.+...+++|+.++..+.+++...  ..+ .++|++||...  +...         +....| 
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~~---------~~~~~Y~  152 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSS--WLPI---------EQYAGYS  152 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGG--TSCC---------TTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhh--cCCC---------CCCccHH
Confidence            999997533   23456778899999999877666654331  144 79999999876  4321         223457 


Q ss_pred             HHHHHHHHHHHHhccc---C--CCeEEEEEeceEEcCCCcc-h-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          168 LAEVCREWEGTALKVN---K--DVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~--~~~~~ilRp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .+|...+.....+..+   .  +++++++|||.++++.... . ......  ......  .......+.+++|+|++++.
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~--~~~p~~~~~~~~dvA~~~~~  228 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE--MVLHDP--KLNRAGRAYMPERIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH--HHBCBT--TTBTTCCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHH--HHhhhh--ccCccCCCCCHHHHHHHHHH
Confidence            7777666665554433   2  8999999999999874211 0 000000  011100  00111237899999999999


Q ss_pred             HhhCCC---CCceEEecCCC
Q 020254          241 ALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~  257 (328)
                      ++..+.   .+.++++.+|.
T Consensus       229 l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          229 LASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHSGGGTTCCSCEEEESSSC
T ss_pred             HcCccccCCCCcEEEECCCc
Confidence            987643   34488887774

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.83  E-value=8e-20  Score=155.70  Aligned_cols=219  Identities=14%  Similarity=0.070  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--ccc----CCCCCccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.+++|||||+|+||+++++.|+++|++|++++|+....  ...    ........+..+|+.|.++++++++       
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999998874321  111    0111111245689999888776663       


Q ss_pred             CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ++|++||+||....    .....+.++..+++|+.++.++++++........++|++||...  +...         +..
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~--~~~~---------~~~  196 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA--YQPS---------PHL  196 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG--TSCC---------TTC
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh--ccCC---------CCc
Confidence            78999999997432    23466788999999999999999999874223358999999876  4422         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC---cchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG---GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ..| .+|...+.....+..+   .|+++.+++||.|.++..   .......        ..+........+..++|+|++
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~p~~r~~~p~dvA~~  268 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI--------PQFGQQTPMKRAGQPAELAPV  268 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGS--------TTTTTTSTTSSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHH--------HHHHhcCCCCCCcCHHHHHHH
Confidence            457 7787777666555443   389999999999988631   0000000        001111222346789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCcc
Q 020254          238 IYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++.++....   .+.++++.+|..+
T Consensus       269 v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          269 YVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCccccCCCCCEEEECCCccC
Confidence            999987543   3449999888654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.83  E-value=3.9e-20  Score=155.92  Aligned_cols=219  Identities=13%  Similarity=0.058  Sum_probs=147.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-cC----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IF----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++|+||||+|+||++++++|+++|++|++++|+.....+ ..    .......+..+|+.|.+++.++++       
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            345789999999999999999999999999999996543211 10    111111244678999888877664       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|+|||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+.
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  175 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIG--ERG---------NMG  175 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTT
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhh--cCC---------CCC
Confidence            799999999975432   3456778899999999998888776542  135578999999765  322         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....+..+   .++++.+++||.+.++.....   .....    ...........+.+++|+|++++
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~----~~~~~~~~~~~~~~p~dvA~~i~  248 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL---KDELK----ADYVKNIPLNRLGSAKEVAEAVA  248 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------CGGGCTTCSCBCHHHHHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh---cHHHH----HHHHhcCCcCCCcCHHHHHHHHH
Confidence            3567 7787777666555544   589999999999987742211   11110    00001111234789999999999


Q ss_pred             HHhhCCC---CCceEEecCCC
Q 020254          240 EALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~  257 (328)
                      .++....   .+.++++.+|.
T Consensus       249 ~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          249 FLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCCCcCCCcCCEEEeCCCe
Confidence            9987543   34499998875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.83  E-value=2.8e-19  Score=150.45  Aligned_cols=218  Identities=12%  Similarity=0.039  Sum_probs=150.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..++++||||+|+||++++++|+++|++|++++++.... ...    ...........+|+.|.++++++++       +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999997765321 111    1111111244679999988877765       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|++||+||....   .....+.++..+++|+.++..+++++........++|++||.... ++.         .+....
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~-~~~---------~~~~~~  179 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE-LVP---------WPGISL  179 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGT-CCC---------STTCHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhc-cCC---------CCCchH
Confidence            9999999997533   234567889999999999999999988742245689999986541 221         123346


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|...+.....++.+   .|+++.+++||.|.++............  ....+++      .+..++|+|++++.++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~------r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          180 YSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQ--RERIATG------SYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHH--HHTCTTS------SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHH--HhcCCCC------CCCCHHHHHHHHHHHh
Confidence            7 7787777666555443   3899999999999987542221222211  1222322      2678999999999998


Q ss_pred             hCCC---CCceEEecCCC
Q 020254          243 SNPS---YRGVINGTAPN  257 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~  257 (328)
                      ....   .+.++++.+|.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            6432   34488887764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.83  E-value=1.3e-19  Score=152.56  Aligned_cols=222  Identities=14%  Similarity=0.012  Sum_probs=150.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ....+++|||||+|+||++++++|+++|++|++++++.... ...    ........+..+|+.|.++++++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34567999999999999999999999999999988765432 111    1111111244689999988877764      


Q ss_pred             -CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                       ++|++||+||.....   ....+.++..+++|+.++.++++++........++|++||...+..+          .+..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~  164 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS----------VPKH  164 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC----------CTTC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC----------CCCC
Confidence             789999999975332   34667889999999999999999988732234589999997631111          2234


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh--------hh-HHHH--HHHcCCCCCCCCcccccc
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--------KM-IPLF--MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--------~~-~~~~--~~~~~~~~~~~~~~~~~i  229 (328)
                      ..| .+|...+.....++.+   .|+++.+++||.+.++......        .. ....  ......|+      ..+.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~  238 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL------HRNG  238 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT------CSCB
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC------CCCC
Confidence            467 7787777666555544   4899999999999987421100        00 0111  11112222      2367


Q ss_pred             cHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          230 HLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++|+|++++.++....   .+.++++.+|.
T Consensus       239 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          239 WPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            89999999999986543   34488887764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.83  E-value=1.3e-19  Score=154.06  Aligned_cols=226  Identities=15%  Similarity=0.066  Sum_probs=151.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc----------------c----cCCCCCccccCceeecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----------------L----IFPGKKTRFFPGVMIAEE   80 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~----~~~~~~~~~~~~~d~~~~   80 (328)
                      ...++++||||+|+||+++++.|+++|++|++++|+.....                .    ............+|+.|.
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            45679999999999999999999999999999999743211                0    001111112345799999


Q ss_pred             hhhHhhcC-------CCcEEEECCCCCCCC----CCChhHHHHHHHhhhhhHHHHHHHHhcC--C-CCCCcEEEEecccc
Q 020254           81 PQWRDCIQ-------GSTAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATAL  146 (328)
Q Consensus        81 ~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~Ss~~v  146 (328)
                      ++++++++       ++|++||+||.....    ....+.++..+++|+.++..+++++...  + ....++|++||...
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            88877764       799999999975332    2456788899999999999999887652  0 12458999999875


Q ss_pred             eeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHH-Hc-CC---
Q 020254          147 GYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FA-GG---  217 (328)
Q Consensus       147 ~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~-~~---  217 (328)
                        +..         .+....| .+|...+.....++.+   .++++.+++||.|..+........ ..+.. .. ..   
T Consensus       169 --~~~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~  236 (286)
T 3uve_A          169 --LKA---------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF-KMFRPDLENPGPDD  236 (286)
T ss_dssp             --TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH-HHHCTTSSSCCHHH
T ss_pred             --ccC---------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh-hhccccccccchhh
Confidence              332         1233457 7777766666555443   489999999999998753211000 00000 00 00   


Q ss_pred             -----CCCCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCcc
Q 020254          218 -----PLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       218 -----~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                           .... ..+..+.+++|+|++++.++....   .+.++++.+|..+
T Consensus       237 ~~~~~~~~~-~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          237 MAPICQMFH-TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHHHHTTC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhhh-ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence                 0001 111457899999999999987543   3449999887543

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.83  E-value=9.5e-20  Score=152.44  Aligned_cols=223  Identities=13%  Similarity=0.071  Sum_probs=146.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++++||||+|+||++++++|+++|++|++++++... ....    ...........+|+.|.++++++++       
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            345799999999999999999999999999998554432 2111    1111112245689999988877764       


Q ss_pred             CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceee-cCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY-GTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~y-g~~~~~~~~e~~~~  163 (328)
                      ++|++||+||....    .....+.++..+++|+.++..+++++........++|++||...  + ..         .+.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  154 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG--RDGG---------GPG  154 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH--HHCC---------STT
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh--ccCC---------CCC
Confidence            78999999986421    24556778899999999999999999873112348999999876  4 21         123


Q ss_pred             CCch-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ...| .+|...+.....++.+.  ++++.+++||.+.++.......  +...    ..+........+.+++|+|++++.
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~----~~~~~~~p~~r~~~pedva~~v~~  228 (259)
T 3edm_A          155 ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVR----ERVAGATSLKREGSSEDVAGLVAF  228 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------CCBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHH----HHHHhcCCCCCCcCHHHHHHHHHH
Confidence            3467 77877776665554432  4999999999998764321100  0000    001111122346789999999999


Q ss_pred             HhhCCC---CCceEEecCCCccC
Q 020254          241 ALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++....   .+.++++.+|....
T Consensus       229 L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          229 LASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             HHSGGGTTCCSCEEEESBCSSBC
T ss_pred             HcCccccCccCCEEEECCCcCCC
Confidence            987543   34499998876444

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.83  E-value=2.9e-20  Score=155.49  Aligned_cols=220  Identities=17%  Similarity=0.106  Sum_probs=148.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC------CCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~   95 (328)
                      ..+++|||||+|+||++++++|+++|++|++++|+.........  ....+..+|+.|.++++++++      ++|++||
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLG--DRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTC--TTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            45789999999999999999999999999999996544322221  111245689999988877765      8999999


Q ss_pred             CCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--C--------CCCCcEEEEecccceeecCCCccccc
Q 020254           96 LAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--P--------EGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        96 ~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~--------~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                      +||....       .....+.++..+++|+.++..+++++...  +        .+..++|++||...  +...      
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~------  157 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA--FDGQ------  157 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC----CCH------
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh--cCCC------
Confidence            9996421       12566778999999999999999988752  1        23457999999775  3311      


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                         +....| .+|...+.....++.+   .++++.+++||.|..+.......-.. .......+.     ...+.+++|+
T Consensus       158 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~-----~~r~~~p~dv  228 (257)
T 3tl3_A          158 ---IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEAR-ASLGKQVPH-----PSRLGNPDEY  228 (257)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHH-HHHHHTSSS-----SCSCBCHHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHH-HHHHhcCCC-----CCCccCHHHH
Confidence               112356 6777666555444433   48999999999998875322111110 011122222     1237899999


Q ss_pred             HHHHHHHhhCCCCCc-eEEecCCCccC
Q 020254          235 VNLIYEALSNPSYRG-VINGTAPNPVR  260 (328)
Q Consensus       235 a~~~~~~~~~~~~~g-~~~i~~~~~~~  260 (328)
                      |++++.++..+...| ++++.+|..++
T Consensus       229 a~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          229 GALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             HHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            999999998755445 99998886544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.83  E-value=5.6e-20  Score=153.26  Aligned_cols=216  Identities=13%  Similarity=0.052  Sum_probs=146.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceee--cCChhhHhhcC-----
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMI--AEEPQWRDCIQ-----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~--~~~~~~~~~~~-----   88 (328)
                      .+.++++||||+|+||+++++.|+++|++|++++|+..+.......     .....+..+|+  .|.++++++++     
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            4567999999999999999999999999999999987654332110     00011345788  77777766553     


Q ss_pred             --CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                        ++|++||+||....    .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------  158 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG--RQG---------  158 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--TSC---------
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh--ccC---------
Confidence              79999999997421    34556778899999999999999988431  145678999999775  321         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      .+....| .+|...+.....++.+.  .+++.++.||.+..+.       ...   ...     ......+..++|++.+
T Consensus       159 ~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-------~~~---~~~-----~~~~~~~~~p~dva~~  223 (252)
T 3f1l_A          159 RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-------RAS---AFP-----TEDPQKLKTPADIMPL  223 (252)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-------HHH---HCT-----TCCGGGSBCTGGGHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-------hhh---hCC-----ccchhccCCHHHHHHH
Confidence            1223467 77877777666555543  3889999999876541       110   000     1112346789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCccCHH
Q 020254          238 IYEALSNPS---YRGVINGTAPNPVRLA  262 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~~~~  262 (328)
                      ++.++....   .+.++++.+|...++.
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            999987643   3449999888765543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.83  E-value=1.3e-19  Score=153.76  Aligned_cols=220  Identities=15%  Similarity=0.010  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+.... ..    +...........+|+.|.+++.++++       +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999986532 11    11111111234578888887776653       7


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|+|||+||.....   ....+.++..+++|+.++.++++++.+...+..++|++||...  +....        +....
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~~--------~~~~~  177 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAKAV--------PKHAV  177 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCSSC--------SSCHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh--ccCCC--------CCCcc
Confidence            89999999975332   2456778899999999999999998873225578999999765  32110        11345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhh-------HH-HH-HHHc--CCCCCCCCccccccc
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM-------IP-LF-MMFA--GGPLGSGQQWFSWIH  230 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~-------~~-~~-~~~~--~~~~~~~~~~~~~i~  230 (328)
                      | .+|...+.....++.+   .|+++++++||.+.++..... ..+       .. .. ....  ..|+      ..+.+
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~  251 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL------RRVGL  251 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT------CSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC------CCCcC
Confidence            7 7777766666554432   489999999999987631110 000       00 01 1111  2232      23689


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ++|+|++++.++....   .+.++++.+|.
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            9999999999987543   34488887764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.82  E-value=2.7e-20  Score=156.01  Aligned_cols=218  Identities=15%  Similarity=0.088  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||+|+||++++++|+++|++|++++|+..+........ .......+|+.|.++++++++       ++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4578999999999999999999999999999999876543322111 111244579999888877664       58999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      ||+||....   .....+.++..+++|+.++.++++++........++|++||...  ++ .         +....| .+
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~-~---------~~~~~Y~as  152 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG--LG-A---------FGLAHYAAG  152 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT--CC-H---------HHHHHHHHC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh--cC-C---------CCcHHHHHH
Confidence            999997533   23345677889999999999999998763112468999999876  52 1         111235 44


Q ss_pred             HHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          170 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       170 k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      |...+.....+..   ..|++++++|||.+.++...... ....  ......|+      ..+.+++|+|++++.++...
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~v~~l~s~~  224 (263)
T 2a4k_A          153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWE--QEVGASPL------GRAGRPEEVAQAALFLLSEE  224 (263)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHH--HHHHTSTT------CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHhCcc
Confidence            5444433333222   25899999999999887422111 1111  11222232      23689999999999998754


Q ss_pred             C---CCceEEecCCCcc
Q 020254          246 S---YRGVINGTAPNPV  259 (328)
Q Consensus       246 ~---~~g~~~i~~~~~~  259 (328)
                      .   .+.++++.++..+
T Consensus       225 ~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          225 SAYITGQALYVDGGRSI  241 (263)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             ccCCcCCEEEECCCccc
Confidence            2   3448888887644

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.82  E-value=1.1e-19  Score=152.91  Aligned_cols=216  Identities=17%  Similarity=0.123  Sum_probs=147.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-cccccC----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.++|+||||+|+||++++++|+++|++|+++.++.. ......    .......+..+|+.|.++++++++       
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999977665443 221111    111111245679999888877764       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHh-----cCCCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                      ++|+|||+||.....   ....+.++..+++|+.++.++++++.     +  .+..++|++||...  +...        
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~--------  171 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA--RQGGRIITLSSVSG--VMGN--------  171 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCHHH--HHCC--------
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHh--ccCC--------
Confidence            799999999975432   34567888999999999999998873     3  45678999999765  3221        


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                       +....| .+|...+.....++.+   .++++.+++||.+.++..........  ......++      ..+..++|+|+
T Consensus       172 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~p~------~~~~~~edva~  242 (267)
T 4iiu_A          172 -RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALK--EAMSMIPM------KRMGQAEEVAG  242 (267)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHH--HHHHTCTT------CSCBCHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHH--HHHhcCCC------CCCcCHHHHHH
Confidence             233457 6776555554444332   38999999999999885432222211  12222232      23678999999


Q ss_pred             HHHHHhhCCC---CCceEEecCCC
Q 020254          237 LIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +++.++....   .+.++++.+|.
T Consensus       243 ~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          243 LASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCCcccCccCCEEEeCCCc
Confidence            9999987533   34488887763

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.82  E-value=5.5e-20  Score=154.25  Aligned_cols=202  Identities=15%  Similarity=0.095  Sum_probs=138.0

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC------
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      .....++||||||+|+||++++++|+++|++|++++|+..+......    .........+|+.|.+++.++++      
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            33456799999999999999999999999999999998765433211    11111244679999888877664      


Q ss_pred             -CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                       ++|+|||+||....    .....+.++..+++|+.++..+++++...  ..+..++|++||...  +..         .
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~  173 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG--KNP---------V  173 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCS--SCC---------C
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhh--cCC---------C
Confidence             68999999997221    23556778899999999999988886531  145678999999875  322         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      +....| .+|...+.....+..+   .++++.+++||.+..+.....   .            .......++.++|+|++
T Consensus       174 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~------------~~~~~~~~~~p~dvA~~  238 (262)
T 3rkr_A          174 ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL---S------------AKKSALGAIEPDDIADV  238 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCCHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc---c------------cccccccCCCHHHHHHH
Confidence            233457 7777666665544433   489999999999887632111   0            00112346799999999


Q ss_pred             HHHHhhCCC
Q 020254          238 IYEALSNPS  246 (328)
Q Consensus       238 ~~~~~~~~~  246 (328)
                      ++.++....
T Consensus       239 v~~l~s~~~  247 (262)
T 3rkr_A          239 VALLATQAD  247 (262)
T ss_dssp             HHHHHTCCT
T ss_pred             HHHHhcCcc
Confidence            999998754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.82  E-value=1.3e-19  Score=156.61  Aligned_cols=220  Identities=12%  Similarity=0.053  Sum_probs=148.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCcccccCC-----CCCccccCceeecCCh-------------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP-------------   81 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~~~~-------------   81 (328)
                      ...+++|||||+|+||+++++.|+++|++|++++ |+.........     ......+..+|+.|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            3457899999999999999999999999999999 87654322111     0111124467999988             


Q ss_pred             ----hhHhhcC-------CCcEEEECCCCCCCC---CCC--------------hhHHHHHHHhhhhhHHHHHHHHhcC--
Q 020254           82 ----QWRDCIQ-------GSTAVVNLAGTPIGT---RWS--------------SEIKKEIKESRIRVTSKVVDLINES--  131 (328)
Q Consensus        82 ----~~~~~~~-------~~d~vi~~a~~~~~~---~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~--  131 (328)
                          +++++++       ++|+|||+||.....   ...              .+.+...+++|+.++..+++++...  
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                7777664       789999999975332   223              5667788999999999998887642  


Q ss_pred             CCC------CCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC
Q 020254          132 PEG------VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG  201 (328)
Q Consensus       132 ~~~------~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~  201 (328)
                      +.+      ..++|++||...  +..         .+....| .+|...+.....++.+   .++.+++++||.|.++. 
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~--~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-  271 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-  271 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-
T ss_pred             hcCCcCCCCCcEEEEECchhh--ccC---------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-
Confidence            123      568999999875  332         1233457 7777666665554443   48999999999999876 


Q ss_pred             cchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--C-CceEEecCCCcc
Q 020254          202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--Y-RGVINGTAPNPV  259 (328)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~g~~~i~~~~~~  259 (328)
                      ........  ......|++     ..+..++|+|++++.++....  . +.++++.+|..+
T Consensus       272 ~~~~~~~~--~~~~~~p~~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          272 DMPPAVWE--GHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             CSCHHHHH--HHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccHHHHH--HHHhhCCCC-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            22211111  112222322     036789999999999986432  3 448888887543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.82  E-value=1.2e-19  Score=152.47  Aligned_cols=225  Identities=16%  Similarity=0.069  Sum_probs=150.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC---CCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ---GST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~---~~d   91 (328)
                      .+.+++|||||+|+||++++++|+++|++|++++|+..........      ........+|+.+.+.++++++   ++|
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            3457899999999999999999999999999999987653322110      0001133568888888877764   799


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ++||+||.....   ....+.++..+++|+.++..+.+++...  ..+..++|++||...  +..         .+....
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~  156 (267)
T 3t4x_A           88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA--IMP---------SQEMAH  156 (267)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG--TSC---------CTTCHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh--ccC---------CCcchH
Confidence            999999975432   3445777888999999977776655431  145678999999876  332         123456


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch------------hhhHHHHHHHcCCCCCCCCccccccc
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL------------AKMIPLFMMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (328)
                      | .+|...+.....++.+   .++++.+++||.+.++.....            ......+. ....+   ......+.+
T Consensus       157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~r~~~  232 (267)
T 3t4x_A          157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFM-KENRP---TSIIQRLIR  232 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHH-HHHCT---TCSSCSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHh-hccCC---cccccCccC
Confidence            7 7787777766655543   379999999999887621100            00000000 00001   011234789


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++|+|++++.++....   .+.++++.+|...+
T Consensus       233 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          233 PEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             THHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999999987533   34499998887554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.82  E-value=2.3e-20  Score=159.57  Aligned_cols=215  Identities=11%  Similarity=0.028  Sum_probs=141.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ...++||||||+|+||++++++|+++|++|++++|+..+......    ......+..+|+.|.++++++++       +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            345689999999999999999999999999999998765433211    11111244689999988877764       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|+|||+||....   .....+.++..+++|+.++.++++++...  ..+ ..++|++||...  +..         .+.
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  177 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG--LVP---------NAG  177 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh--cCC---------CCC
Confidence            9999999997533   23456778899999999999999987542  022 468999999875  332         122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~  236 (328)
                      ...| .+|...+.....+..+   .|+++++++||.+..+..................+   .+.......+++++|+|+
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~  257 (301)
T 3tjr_A          178 LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVAR  257 (301)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHH
Confidence            3457 7777666655544433   38999999999998763111000000000000111   122223456899999999


Q ss_pred             HHHHHhhCCC
Q 020254          237 LIYEALSNPS  246 (328)
Q Consensus       237 ~~~~~~~~~~  246 (328)
                      +++.++..+.
T Consensus       258 ~i~~~l~~~~  267 (301)
T 3tjr_A          258 LTADAILANR  267 (301)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHhcCC
Confidence            9999998753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.82  E-value=7.1e-20  Score=154.14  Aligned_cols=208  Identities=12%  Similarity=0.051  Sum_probs=136.6

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCc
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      ..+.+++|||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.++++++++       ++|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            34567899999999999999999999999999999987654332211 0111245689999988887765       799


Q ss_pred             EEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC--CCcEEEEecccceeecCCCcccccCCCCC
Q 020254           92 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        92 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++||+||....    .....+.++..+++|+.++..+++++...  +.+  ..++|++||...  +..         .+.
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~~~  173 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA--TSP---------RPY  173 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST--TSC---------CTT
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh--cCC---------CCC
Confidence            99999997432    23566788999999999988887776542  022  468999999775  322         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....++.+   .++++.+++||.|..+..........  ...      .......+..++|+|++++
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~------~~~~~~~~~~pedvA~~v~  245 (272)
T 4dyv_A          174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP--QAD------LSIKVEPVMDVAHVASAVV  245 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------CHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch--hhh------hcccccCCCCHHHHHHHHH
Confidence            3457 7777776666555443   48999999999998874221110000  000      0111234789999999999


Q ss_pred             HHhhCCC
Q 020254          240 EALSNPS  246 (328)
Q Consensus       240 ~~~~~~~  246 (328)
                      .++..+.
T Consensus       246 fL~s~~~  252 (272)
T 4dyv_A          246 YMASLPL  252 (272)
T ss_dssp             HHHHSCT
T ss_pred             HHhCCCC
Confidence            9999876

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=1.2e-19  Score=153.70  Aligned_cols=207  Identities=16%  Similarity=0.090  Sum_probs=138.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC--CccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ...++||||||+|+||+++++.|+++|++|++++|++.+......    ..  .......+|+.|+++++++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            345789999999999999999999999999999998654332211    00  011134579999988877664      


Q ss_pred             -CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhh----HHHHHHHHhcCCCCC--CcEEEEecccceeecCCCccccc
Q 020254           89 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGV--RPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~--~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                       ++|+|||+||.....   ....+.+...+++|+.+    ++.+++.+++  .+.  .++|++||...  +...+     
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~~g~iv~isS~~~--~~~~~-----  180 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE--RNVDDGHIININSMSG--HRVLP-----  180 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCSCEEEEECCGGG--TSCCS-----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCCceEEEEcChhh--cccCC-----
Confidence             799999999965332   33567788999999999    6777777777  453  79999999876  53211     


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhcc-----cCCCeEEEEEeceEEcCCCc-chhhhHHHHHHHcCCCCCCCCcccccccH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  231 (328)
                        .+....| .+|...+.....+..     ..++++++++||.+.++... ............        .....++++
T Consensus       181 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~  250 (279)
T 1xg5_A          181 --LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT--------YEQMKCLKP  250 (279)
T ss_dssp             --CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH--------HC---CBCH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh--------cccccCCCH
Confidence              1122356 667665554443322     35899999999999876310 000000001000        011236899


Q ss_pred             HHHHHHHHHHhhCCC
Q 020254          232 DDIVNLIYEALSNPS  246 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~  246 (328)
                      +|+|++++.++..+.
T Consensus       251 ~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          251 EDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999998765

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.82  E-value=4.3e-19  Score=144.74  Aligned_cols=218  Identities=12%  Similarity=0.059  Sum_probs=151.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA   97 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a   97 (328)
                      .+.|+++||||++.||+++++.|++.|++|++++|+..........  ......+|+.|+++++++++   ++|++||+|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNA   86 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHP--RIRREELDITDSQRLQRLFEALPRLDVLVNNA   86 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCT--TEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcC--CeEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence            3568999999999999999999999999999999987765433221  11244689999998887764   799999999


Q ss_pred             CCCCC-CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHH
Q 020254           98 GTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  174 (328)
Q Consensus        98 ~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  174 (328)
                      |.... .....+.++..+++|+.++..+.+++... +.+..++|++||...  +..         .+....| .+|....
T Consensus        87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~--~~~---------~~~~~~Y~asKaav~  155 (242)
T 4b79_A           87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS--TFG---------SADRPAYSASKGAIV  155 (242)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG--TSC---------CSSCHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc--cCC---------CCCCHHHHHHHHHHH
Confidence            97533 34556788999999999988887776543 123468999999764  221         1233467 7776666


Q ss_pred             HHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC---C
Q 020254          175 WEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---Y  247 (328)
Q Consensus       175 ~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~  247 (328)
                      .....++.+   +|+++..|.||.|..+-......-.... ......|++.      +-.++|+|.+++.++....   .
T Consensus       156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~fLaSd~a~~iT  229 (242)
T 4b79_A          156 QLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR------WGEAPEVASAAAFLCGPGASFVT  229 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS------CBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC------CcCHHHHHHHHHHHhCchhcCcc
Confidence            665555443   4899999999999877422111111111 2334445432      5678999999999986543   3


Q ss_pred             CceEEecCCC
Q 020254          248 RGVINGTAPN  257 (328)
Q Consensus       248 ~g~~~i~~~~  257 (328)
                      +.++.+.+|-
T Consensus       230 G~~l~VDGG~  239 (242)
T 4b79_A          230 GAVLAVDGGY  239 (242)
T ss_dssp             SCEEEESTTG
T ss_pred             CceEEECccH
Confidence            3488887763

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.82  E-value=1.4e-19  Score=151.33  Aligned_cols=221  Identities=15%  Similarity=0.085  Sum_probs=146.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCChhhHhhcC------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ....++||||||+|+||++++++|+++|++|+++++ +........    ..........+|+.|.++++++++      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            345679999999999999999999999999999884 443322211    111111244578999888777664      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                       ++|+|||+||....   .....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  158 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG--QKG---------QF  158 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCG--GGS---------CS
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhh--ccC---------CC
Confidence             78999999997543   23456778899999999988877766331  145578999999765  322         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|...+.....++.+   .++++.+++||.+.++..... .....  ......++      ..+..++|+|++
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~  230 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE--KIVATIPV------RRLGSPDEIGSI  230 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHHSTT------SSCBCHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence            33567 7777666665544443   489999999999987632111 11111  11122222      236789999999


Q ss_pred             HHHHhhCCC---CCceEEecCCCcc
Q 020254          238 IYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       238 ~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      ++.++....   .+.++++.+|..+
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          231 VAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHHhCCcccCCcCcEEEECCCEeC
Confidence            999986532   3449999887643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.82  E-value=6.3e-20  Score=157.98  Aligned_cols=222  Identities=14%  Similarity=0.122  Sum_probs=149.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc------------c----cCCCCCccccCceeecCChhhH
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------------L----IFPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~----~~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      ...+++|||||+|+||+++++.|+++|++|++++|+.....            .    ............+|+.|.++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            34578999999999999999999999999999988732211            0    0001111123457999988887


Q ss_pred             hhcC-------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecC
Q 020254           85 DCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGT  151 (328)
Q Consensus        85 ~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~  151 (328)
                      ++++       ++|++||+||....   .....+.++..+++|+.++..+++++...   .....++|++||...  +..
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~--~~~  201 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG--LRG  201 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG--SSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh--cCC
Confidence            7764       79999999997543   24456788899999999999998887542   122457999999875  332


Q ss_pred             CCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-------------HHH
Q 020254          152 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMF  214 (328)
Q Consensus       152 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-------------~~~  214 (328)
                      .         +....| .+|...+.....++.+   .|+++.+++||.|.++..... .....+             ...
T Consensus       202 ~---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T 3oec_A          202 A---------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE-KLLKMFLPHLENPTREDAAELF  271 (317)
T ss_dssp             C---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH-HHHHHHCTTCSSCCHHHHHHHH
T ss_pred             C---------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch-hhhhhhhhhccccchhHHHHHH
Confidence            1         223457 7777776666555544   489999999999987631100 000000             000


Q ss_pred             cCCCCCCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          215 AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      ..    ....+..+++++|+|++++.++....   .+.++++.+|..
T Consensus       272 ~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          272 SQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             TT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            00    11122567899999999999986543   344999988754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.82  E-value=7.8e-20  Score=153.53  Aligned_cols=221  Identities=18%  Similarity=0.049  Sum_probs=150.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----CCC-ccccCceeecCChhhHhhcC------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKK-TRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ...+++|||||+|+||++++++|+++|++|++++|+..+......     ... ......+|+.|.++++++++      
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            345789999999999999999999999999999998765332211     000 01244579999888776653      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                       ++|++||+||....   .....+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  154 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA--SQP---------EP  154 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG--TSC---------CT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc--CCC---------CC
Confidence             78999999997533   24556788899999999999999988642  134568999999775  322         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-----------hhhHHHHHHHcCCCCCCCCcccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQWFS  227 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  227 (328)
                      ....| .+|...+.....++.+   .|+++.+++||.+.++.....           ..+..........|++      .
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------r  228 (265)
T 3lf2_A          155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG------R  228 (265)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTC------S
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcC------C
Confidence            23457 7777666665555443   389999999999987631100           0111111111112322      3


Q ss_pred             cccHHHHHHHHHHHhhCCC--CCc-eEEecCCCc
Q 020254          228 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       228 ~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      +..++|+|++++.++....  ..| ++++.+|..
T Consensus       229 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          229 LGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            6789999999999987533  334 888887753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.82  E-value=1.4e-19  Score=150.70  Aligned_cols=211  Identities=18%  Similarity=0.129  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.++|+||||+|+||+++++.|+++|++|++++|++.+...       .....+|+.|+++++++++       ++|+||
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45789999999999999999999999999999998654332       1145679999988877664       579999


Q ss_pred             ECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +...         +....| .
T Consensus        93 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~a  161 (253)
T 2nm0_A           93 ANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVG--LLGS---------AGQANYAA  161 (253)
T ss_dssp             EECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCCH---------HHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhh--CCCC---------CCcHHHHH
Confidence            999975322   2345677899999999999988876542  135678999999765  3211         112346 6


Q ss_pred             HHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchh-hhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          169 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       169 ~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      +|...+.....++.   ..++++++++||.+.++...... ....  ......|+      ..++.++|+|++++.++..
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~i~~l~s~  233 (253)
T 2nm0_A          162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRA--NIVSQVPL------GRYARPEEIAATVRFLASD  233 (253)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHH--HHHTTCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence            67666555544433   24899999999998776422110 0111  11112222      2378999999999999876


Q ss_pred             CC---CCceEEecCCCc
Q 020254          245 PS---YRGVINGTAPNP  258 (328)
Q Consensus       245 ~~---~~g~~~i~~~~~  258 (328)
                      +.   .+.++.+.+|..
T Consensus       234 ~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          234 DASYITGAVIPVDGGLG  250 (253)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             cccCCcCcEEEECCccc
Confidence            43   344888887754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.82  E-value=1.7e-19  Score=150.60  Aligned_cols=216  Identities=13%  Similarity=0.035  Sum_probs=141.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~   95 (328)
                      |++++||||+|+||+++++.|+++|++|++++|+..+...... ... ....+...|.+++++++       .++|+|||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~-~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAE-TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHH-HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHh-cCCcEEEECHHHHHHHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999999999999998765432211 000 00011111665555444       37999999


Q ss_pred             CCCCC-CC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           96 LAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        96 ~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      +||.. ..   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+....| .
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  147 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP--FGP---------WKELSTYTS  147 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT--TSC---------CTTCHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccc--ccC---------CCCchHHHH
Confidence            99975 22   23456778899999999999988887531  135679999999775  332         1233457 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch--hhh---HHH-H-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKM---IPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~---~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      +|...+.....+..+   .++++++++||.++|+.....  ..+   .+. . ......++      ..+.+++|+|+++
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA~~v  221 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL------QRLGTQKELGELV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC------CCCcCHHHHHHHH
Confidence            777666665544433   489999999999988753211  000   000 0 11111122      1267899999999


Q ss_pred             HHHhhCCC---CCceEEecCCC
Q 020254          239 YEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +.++....   .+.++++.+|.
T Consensus       222 ~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          222 AFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             HHHHTTSCGGGTTCEEEESTTC
T ss_pred             HHHhCcccCCccCCEEEECCCc
Confidence            99987654   34488888775

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.82  E-value=8.8e-20  Score=152.74  Aligned_cols=206  Identities=13%  Similarity=0.136  Sum_probs=137.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.+++|||||+|+||+++++.|+++|++|++++|+..+......    .........+|+.|.++++++++       ++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998765433211    11111234579999888877664       79


Q ss_pred             cEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |++||+||.....   ....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+...
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~---------~~~~~  151 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA--LSV---------VPTAA  151 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CTTCH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH--ccc---------CCCCh
Confidence            9999999975332   3456778899999999998888776542  135578999999875  332         12334


Q ss_pred             ch-HHHHHHHHHHHHhcccC-CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          166 DY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      .| .+|...+.....++.+. ++++.+++||.|..+-....   .....    ... .......+..++|+|++++.++.
T Consensus       152 ~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~---~~~~~----~~~-~~~~~~~~~~pedvA~~v~~l~s  223 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI---THEET----MAA-MDTYRAIALQPADIARAVRQVIE  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------CCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc---cchhH----HHH-HHhhhccCCCHHHHHHHHHHHhc
Confidence            57 77777766665554433 89999999999987642111   00000    000 00001124789999999999999


Q ss_pred             CCC
Q 020254          244 NPS  246 (328)
Q Consensus       244 ~~~  246 (328)
                      .+.
T Consensus       224 ~~~  226 (264)
T 3tfo_A          224 APQ  226 (264)
T ss_dssp             SCT
T ss_pred             CCc
Confidence            876

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.82  E-value=4.8e-19  Score=151.33  Aligned_cols=220  Identities=10%  Similarity=0.016  Sum_probs=150.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc------------cc----cCCCCCccccCceeecCChhhH
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------EL----IFPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~----~~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      ...++++||||+|+||.++++.|+++|++|++++|++...            ..    +...........+|+.|.++++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            3457899999999999999999999999999999974311            00    0011111124467999988887


Q ss_pred             hhcC-------CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeec
Q 020254           85 DCIQ-------GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYG  150 (328)
Q Consensus        85 ~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg  150 (328)
                      ++++       ++|++||+||....    .....+.++..+++|+.++..+++++...   ..+..++|++||...  +.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~--~~  183 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG--LR  183 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG--TS
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh--cc
Confidence            7664       79999999997532    23466788999999999999999887542   123568999999875  33


Q ss_pred             CCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh-----------HHHH----
Q 020254          151 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-----------IPLF----  211 (328)
Q Consensus       151 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~-----------~~~~----  211 (328)
                      .         .+....| .+|...+.....++.+   .|+++.+++||.|.++........           ....    
T Consensus       184 ~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (299)
T 3t7c_A          184 G---------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS  254 (299)
T ss_dssp             C---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             C---------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence            2         1233467 7777776666555443   389999999999998753211000           0000    


Q ss_pred             HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCCc
Q 020254          212 MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~~  258 (328)
                      .....       .+..+..++|+|++++.++....   .+.++++.+|..
T Consensus       255 ~~~~~-------~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          255 RQMHV-------LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             HHHSS-------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhcc-------cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            01111       11347899999999999987543   344999988754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.82  E-value=2e-19  Score=147.89  Aligned_cols=198  Identities=15%  Similarity=0.131  Sum_probs=136.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcCC----CcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQG----STAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~----~d~vi~~a   97 (328)
                      |++||||||+|+||++++++|+++|++|++++|+........... ....+..+|+.|.++++++++.    .|+|||+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            468999999999999999999999999999999876544332211 1112446799999988887754    49999999


Q ss_pred             CCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHH
Q 020254           98 GTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC  172 (328)
Q Consensus        98 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~  172 (328)
                      |.....   ....+.++..+++|+.++.++++++... .....++|++||...  +..         .+....| .+|..
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~asKaa  149 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA--QQP---------KAQESTYCAVKWA  149 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG--TSC---------CTTCHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc--CCC---------CCCCchhHHHHHH
Confidence            975332   3456778889999999999999987653 122338999999876  332         2233467 77877


Q ss_pred             HHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          173 REWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       173 ~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .+.....++.+   .++++.+++||.+..+......         .      ......+.+++|+|++++.++..+.
T Consensus       150 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~------~~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          150 VKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG---------K------SLDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC---------C------CCCcccCCCHHHHHHHHHHHHhCcC
Confidence            77766655544   3899999999998876321110         0      0112347899999999999987654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.82  E-value=1.7e-19  Score=151.39  Aligned_cols=216  Identities=16%  Similarity=0.087  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.++++||||+|+||++++++|+++|++|++++++... .....    ..........+|+.|.++++++++       +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999988665442 22111    111111244679999988877764       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|++||+||....   .....+.++..+++|+.++.++++++........++|++||...  +...         +....
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~  174 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQV--GLLH---------PSYGI  174 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHH--HHCC---------TTCHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhh--ccCC---------CCchH
Confidence            8999999997533   23455678889999999999999888762112358999999775  3321         23346


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc--hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      | .+|...+.....++.+   .|+++.+++||.+..+....  ......  ......|+      ..+..++|+|++++.
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~p~------~r~~~pedvA~~v~~  246 (267)
T 3u5t_A          175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRD--RFAKLAPL------ERLGTPQDIAGAVAF  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHH--HHHTSSTT------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHH
Confidence            7 7787777776666554   38999999999998764211  001111  11122222      236789999999999


Q ss_pred             HhhCCC--CCc-eEEecCC
Q 020254          241 ALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       241 ~~~~~~--~~g-~~~i~~~  256 (328)
                      ++....  ..| ++++.+|
T Consensus       247 L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          247 LAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHSTTTTTCCSEEEEESSS
T ss_pred             HhCccccCccCCEEEeCCC
Confidence            987644  344 8888766

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.81  E-value=8.5e-20  Score=154.79  Aligned_cols=218  Identities=16%  Similarity=0.153  Sum_probs=151.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      ..+++|||||+|+||+++++.|+++|+   +|++++|+..........      ........+|+.|.++++++++    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999987   999999987654332211      1111244689999998887764    


Q ss_pred             ---CCcEEEECCCCCC-C---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 ---GSTAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 ---~~d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                         ++|++||+||... .   .....+.++..+++|+.++..+++++...  ..+..++|++||...  +..        
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~--------  181 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG--RDA--------  181 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC--------
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh--cCC--------
Confidence               6899999999643 1   24466788999999999999999987421  145678999999875  321        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHHHH-HHHcCCCCCCCCcccccccHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                       .+....| .+|...+.....++.+   .|+++++++||.|..+.... ........ .....         ..++.++|
T Consensus       182 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p~~ped  251 (287)
T 3rku_A          182 -YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTPLMADD  251 (287)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCCEEHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCCCCHHH
Confidence             2233467 7787777766655554   58999999999998873100 00000111 11111         12358999


Q ss_pred             HHHHHHHHhhCCC---CCceEEecCCCcc
Q 020254          234 IVNLIYEALSNPS---YRGVINGTAPNPV  259 (328)
Q Consensus       234 ~a~~~~~~~~~~~---~~g~~~i~~~~~~  259 (328)
                      +|++++.++..+.   .++++.+.++++.
T Consensus       252 vA~~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          252 VADLIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence            9999999998765   3448888777643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.81  E-value=6.2e-20  Score=155.13  Aligned_cols=200  Identities=15%  Similarity=0.043  Sum_probs=139.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+++|+||||+|+||++++++|++ .|++|++++|+..+......    ......+..+|+.|.++++++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999 99999999998654332110    01111245679999888887775       7


Q ss_pred             CcEEEECCCCCCCCC--CC-hhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecC-CC--c--------c
Q 020254           90 STAVVNLAGTPIGTR--WS-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SE--T--------E  155 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~--~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~-~~--~--------~  155 (328)
                      +|+|||+||......  .. .+.++..+++|+.++.++++++.+......++|++||...  +.. ..  .        .
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~--~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS--VRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH--HHHHHTSCHHHHHHHHCS
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhh--hcccccCChhHHhhcccc
Confidence            999999999753321  11 3667889999999999999999873112348999999776  421 00  0        0


Q ss_pred             cccCC---------------------CCCCCch-HHHHHHHHHHHHhccc-------CCCeEEEEEeceEEcCCCcchhh
Q 020254          156 VFDES---------------------SPSGNDY-LAEVCREWEGTALKVN-------KDVRLALIRIGIVLGKDGGALAK  206 (328)
Q Consensus       156 ~~~e~---------------------~~~~~~y-~~k~~~~~~~~~~~~~-------~~~~~~ilRp~~v~g~~~~~~~~  206 (328)
                      .++|+                     ..+...| .+|...+.....++.+       .++++++++||.|.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            01110                     1123567 7787776666554443       48999999999988764210   


Q ss_pred             hHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          207 MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                                         ..+.+++|+|++++.++..+
T Consensus       238 -------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 -------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             -------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             -------------------cccCChhHhhhhHhhhhcCc
Confidence                               13689999999999999754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.81  E-value=6.7e-19  Score=146.00  Aligned_cols=211  Identities=15%  Similarity=0.062  Sum_probs=142.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-e--cCCCcccccCCCCCccccCceeecCChhhHhhc-------CCCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-T--RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~   92 (328)
                      +|+++||||+|+||+++++.|+++|++|+++ +  |++.+.......     ....++.|.+++++++       .++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESE-----NPGTIALAEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-----STTEEECCCCCGGGHHHHHGGGSSCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHH-----hCCCcccCHHHHHHHHHHHHHHcCCCCE
Confidence            3689999999999999999999999999999 6  876544332211     1134555666665544       26899


Q ss_pred             EEECCCCCCC------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           93 VVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        93 vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |||+||....      .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+..
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~  144 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVG--KKP---------LAYN  144 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSC---------CTTC
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh--CCC---------CCCc
Confidence            9999997533      23456778899999999999988877531  145678999999876  432         1234


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC---cchhhhHHHH-HHHc-CCCCCCCCcccccccHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG---GALAKMIPLF-MMFA-GGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~---~~~~~~~~~~-~~~~-~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ..| .+|...+.....++.+   .++++++++||.+..+..   ..... -... .... ..|++      .+..++|+|
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~p~~------r~~~pe~vA  217 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN-NPELRERVDRDVPLG------RLGRPDEMG  217 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH-CHHHHHHHHHHCTTC------SCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc-hHHHHHHHhcCCCCC------CCcCHHHHH
Confidence            567 7777776665554433   489999999999987743   11100 0011 1111 12221      267899999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ++++.++....  ..| .+.+.+|
T Consensus       218 ~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          218 ALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             HHHHHHcCccccCccCCEEEeCCC
Confidence            99999988644  334 7777665

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.81  E-value=5e-19  Score=149.99  Aligned_cols=220  Identities=17%  Similarity=0.078  Sum_probs=150.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------~~d~vi   94 (328)
                      ..++++||||+|+||++++++|+++|++|++++|+..+....... .....+..+|+.|.++++++++      ++|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            346899999999999999999999999999999987654333211 1111245689999988877664      689999


Q ss_pred             EC-CCCCCCC--------CCChhHHHHHHHhhhhhHHHHHHHHhcC--C------CCCCcEEEEecccceeecCCCcccc
Q 020254           95 NL-AGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES--P------EGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        95 ~~-a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~------~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      |+ |+.....        ....+.+...+++|+.++.++++++...  .      .+..++|++||...  +..      
T Consensus       109 ~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~------  180 (281)
T 3ppi_A          109 VAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG--YEG------  180 (281)
T ss_dssp             ECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG--TSC------
T ss_pred             EccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc--cCC------
Confidence            99 4432211        3445668899999999999999887642  0      23458999999876  332      


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v  231 (328)
                         .+....| .+|...+.....++.+   .++++.+++||.|..+...   .+....  ......++     ...+.++
T Consensus       181 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~-----~~~~~~p  249 (281)
T 3ppi_A          181 ---QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME---SVGEEALAKFAANIPF-----PKRLGTP  249 (281)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---TTCHHHHHHHHHTCCS-----SSSCBCH
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh---cccHHHHHHHHhcCCC-----CCCCCCH
Confidence               1233467 7777666655444433   3899999999999765211   111111  12222222     1347899


Q ss_pred             HHHHHHHHHHhhCCCCCc-eEEecCCCccC
Q 020254          232 DDIVNLIYEALSNPSYRG-VINGTAPNPVR  260 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~~~g-~~~i~~~~~~~  260 (328)
                      +|+|++++.++......| ++++.+|..++
T Consensus       250 edvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          250 DEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            999999999998755445 89998887654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.81  E-value=2.6e-19  Score=147.51  Aligned_cols=197  Identities=17%  Similarity=0.037  Sum_probs=137.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +++++||||+|+||++++++|+++|++|++++|+..+........ .......+|+.|.++++++++       ++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            578999999999999999999999999999999876543321110 011244679999888877664       689999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      |+||....   .....+.++..+++|+.++..+++++... +....++|++||...  +...         +....| .+
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~~Y~as  151 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA--QVGK---------ANESLYCAS  151 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEEC--CSSC---------SSHHHHHHH
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHh--cCCC---------CCCcHHHHH
Confidence            99997432   24567888999999999998888887542 112238999999765  3221         222457 77


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      |...+.....++.+   .|+++.+++||.+..+.......          .      ....+..++|+|++++.++..+.
T Consensus       152 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------~------~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          152 KWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------V------DPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------C------CCcCCCCHHHHHHHHHHHHhCCC
Confidence            77777666555543   48999999999997763211100          0      01247899999999999998655

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.81  E-value=4.5e-19  Score=147.31  Aligned_cols=207  Identities=15%  Similarity=0.110  Sum_probs=140.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.++++||||+|+||++++++|+++|++|++++|+.........    .........+|+.|+++++++++       ++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998654332211    01111234579999888876664       79


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      |++||+||....   .....+.++..+++|+.++.++++++...  +.+ .++|++||...  +..         .+...
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~---------~~~~~  153 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAG--RVN---------VRNAA  153 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG--TCC---------CTTCH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHh--cCC---------CCCCc
Confidence            999999997533   23456778889999999999998887642  124 78999999765  331         12334


Q ss_pred             ch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      .| .+|...+.....+..   ..|+++++++||.+.++....... ..........+ +    ...++.++|+|++++.+
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~-~----~~~~~~pedvA~~v~~l  227 (247)
T 2jah_A          154 VYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQRI-S----QIRKLQAQDIAEAVRYA  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHHHHT-T----TSCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHHhcc-c----ccCCCCHHHHHHHHHHH
Confidence            57 667665555444433   248999999999998764211100 00000011111 1    11258999999999999


Q ss_pred             hhCCC
Q 020254          242 LSNPS  246 (328)
Q Consensus       242 ~~~~~  246 (328)
                      +..+.
T Consensus       228 ~s~~~  232 (247)
T 2jah_A          228 VTAPH  232 (247)
T ss_dssp             HHSCT
T ss_pred             hCCCc
Confidence            98754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.81  E-value=1.1e-19  Score=153.20  Aligned_cols=218  Identities=12%  Similarity=-0.005  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC------CCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------GST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~------~~d   91 (328)
                      ..++++||||+|+||+++++.|+++|++|++++|+.........    .........+|+.|.++++++++      ++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999998765433221    11111244679999988877664      789


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ++||+||.....   ....+.++..+++|+.++..+++++...  ..+..++|++||...  +..         .+....
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~--~~~---------~~~~~~  180 (275)
T 4imr_A          112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ--LRP---------KSVVTA  180 (275)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTBHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh--CCC---------CCCchh
Confidence            999999975332   3456778889999999999998887431  135578999999876  331         122234


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh-HHHH-HHHcCC-CCCCCCcccccccHHHHHHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGG-PLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      | .+|...+.....++.+   .++++.+++||.+..+........ .... ...... |++      .+..++|+|++++
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~------r~~~pedvA~~v~  254 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG------RAGRPEEMVGAAL  254 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC------SCBCGGGGHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccC------CCcCHHHHHHHHH
Confidence            7 7777776666555443   389999999999987632111000 0001 111111 221      2567899999999


Q ss_pred             HHhhCCC---CCceEEecCC
Q 020254          240 EALSNPS---YRGVINGTAP  256 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~  256 (328)
                      .++....   .+.++++.+|
T Consensus       255 fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          255 FLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHSGGGTTCCSCEEEESSC
T ss_pred             HHcCcccCCCCCCEEEeCCC
Confidence            9987543   3448888765

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.80  E-value=5.8e-19  Score=146.65  Aligned_cols=215  Identities=15%  Similarity=0.116  Sum_probs=141.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN   95 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~   95 (328)
                      |+++||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.++++++++       ++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            5799999999999999999999999999999987543322110 0011244579999988887764       6899999


Q ss_pred             CCCCCC-C---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           96 LAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        96 ~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      +||... .   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..         .+....| .
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a  149 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG--SWP---------YAGGNVYGA  149 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC---------CTTCHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchh--ccC---------CCCCchHHH
Confidence            999742 1   23456778899999999998888877631  135678999999875  332         1233467 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEc-CCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      +|...+.....++.+   .|+++++++||.+.| +....  .+........  ..   .....++.++|+|++++.++..
T Consensus       150 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~--~~~~~~~~~~--~~---~~~~~~~~p~dvA~~v~~l~s~  222 (248)
T 3asu_A          150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--RFKGDDGKAE--KT---YQNTVALTPEDVSEAVWWVSTL  222 (248)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh--cccCchHHHH--HH---HhccCCCCHHHHHHHHHHHhcC
Confidence            777777766555443   489999999999984 42110  0000000000  00   0012347999999999999987


Q ss_pred             CC-C-CceEEecCC
Q 020254          245 PS-Y-RGVINGTAP  256 (328)
Q Consensus       245 ~~-~-~g~~~i~~~  256 (328)
                      +. . +..+.+...
T Consensus       223 ~~~~~g~~i~v~~~  236 (248)
T 3asu_A          223 PAHVNINTLEMMPV  236 (248)
T ss_dssp             CTTCCCCEEEECCT
T ss_pred             CccceeeEEEEccc
Confidence            54 2 335555443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.80  E-value=6.6e-19  Score=148.88  Aligned_cols=225  Identities=15%  Similarity=0.073  Sum_probs=149.5

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc-------------cccc----CCCCCccccCceeecCChh
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-------------AELI----FPGKKTRFFPGVMIAEEPQ   82 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~----~~~~~~~~~~~~d~~~~~~   82 (328)
                      ....++++||||+|+||+++++.|+++|++|++++|+...             ....    ...........+|+.|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            3456789999999999999999999999999999985321             1100    0001111234578999888


Q ss_pred             hHhhcC-------CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceee
Q 020254           83 WRDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYY  149 (328)
Q Consensus        83 ~~~~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~y  149 (328)
                      ++++++       ++|++||+||.....   ....+.++..+++|+.++..+++++...  +.+ ..++|++||...  +
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~  165 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG--M  165 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--T
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh--C
Confidence            877664       699999999975432   3466788999999999999998886542  022 458999999875  3


Q ss_pred             cCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHH-HHHHHcCCC----CC
Q 020254          150 GTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIP-LFMMFAGGP----LG  220 (328)
Q Consensus       150 g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~-~~~~~~~~~----~~  220 (328)
                      ...         +....| .+|...+.....++.+   .|+++.+++||.+.++....  .... ........+    ..
T Consensus       166 ~~~---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~  234 (277)
T 3tsc_A          166 KMQ---------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--DMVTAVGQAMETNPQLSHVL  234 (277)
T ss_dssp             SCC---------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--HHHHHHHHHHHTCGGGTTTT
T ss_pred             CCC---------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--hhhhhhhhcccccHHHHHHh
Confidence            321         223457 7777776666555443   48999999999998874221  0111 011110111    11


Q ss_pred             CCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          221 SGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       221 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      ....+..+.+++|+|++++.++....   .+.++++.+|.
T Consensus       235 ~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          235 TPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             CCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            11112248899999999999987543   34488888774

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.80  E-value=1.8e-19  Score=149.59  Aligned_cols=209  Identities=16%  Similarity=0.102  Sum_probs=127.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChh---hHhh---cCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDC---IQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~---~~~~d~vi~   95 (328)
                      +.++++||||+|+||++++++|++ |++|++++|++........... .....+|+.+.+.   +.+.   +.++|+|||
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEG-VEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTT-EEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcC-CcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            357899999999999999999988 9999999998765544332111 1133456665532   2222   237999999


Q ss_pred             CCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           96 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        96 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      +||.....   ....+.++..+++|+.++..+++++... .....++|++||...  +...         +....| .+|
T Consensus        82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~asK  150 (245)
T 3e9n_A           82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAG--NGPH---------PGNTIYAASK  150 (245)
T ss_dssp             CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHHHH
T ss_pred             CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccc--ccCC---------CCchHHHHHH
Confidence            99975332   2244667788999999988887776431 012368999999876  4422         223457 778


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                      ...+.....++.+   .|+++.+++||.+.++....   +....    +    .......+++++|+|++++.++..+..
T Consensus       151 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~----~----~~~~~~~~~~p~dvA~~i~~l~~~~~~  219 (245)
T 3e9n_A          151 HALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG---LMDSQ----G----TNFRPEIYIEPKEIANAIRFVIDAGET  219 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh---hhhhh----h----cccccccCCCHHHHHHHHHHHHcCCCc
Confidence            7777666555443   48999999999998874211   11100    0    011124478999999999999998776


Q ss_pred             CceEEec
Q 020254          248 RGVINGT  254 (328)
Q Consensus       248 ~g~~~i~  254 (328)
                      ..+|++.
T Consensus       220 ~~~~~i~  226 (245)
T 3e9n_A          220 TQITNVD  226 (245)
T ss_dssp             EEEEEEE
T ss_pred             cceeeeE
Confidence            6688874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.80  E-value=7.1e-20  Score=152.35  Aligned_cols=210  Identities=18%  Similarity=0.138  Sum_probs=141.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-------CCCccccCceeecCChhhHhhcC-----
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      .+.+++|||||+|+||.+++++|+++|++|++++|+..+......       ......+..+|+.|.++++++++     
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999998765433211       10111244679999888877664     


Q ss_pred             --CCcEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 --GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 --~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                        ++|++||+||.....  ....+.++..+++|+.++..+++++...  ..+..++|++||.... ++.          +
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~  153 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK-YGF----------A  153 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------C
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc-CCC----------C
Confidence              689999999975332  2344667889999999999998887431  1355789999997651 221          1


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      +...| .+|...+.....++.+   .|+++.+++||.+..+.       ..   . ...    ......++.++|+|+++
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------~~---~-~~~----~~~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          154 DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-------AK---K-AGT----PFKDEEMIQPDDLLNTI  218 (250)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------HH---H-TTC----CSCGGGSBCHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------hh---h-cCC----CcccccCCCHHHHHHHH
Confidence            23567 7777666665554443   48999999999986542       11   0 011    11223478999999999


Q ss_pred             HHHhhCCC---CCc-eEEecCC
Q 020254          239 YEALSNPS---YRG-VINGTAP  256 (328)
Q Consensus       239 ~~~~~~~~---~~g-~~~i~~~  256 (328)
                      +.++..+.   ..+ ++.+.++
T Consensus       219 ~~l~s~~~~~~~~~~~i~vd~~  240 (250)
T 3nyw_A          219 RCLLNLSENVCIKDIVFEMKKS  240 (250)
T ss_dssp             HHHHTSCTTEECCEEEEEEHHH
T ss_pred             HHHHcCCCceEeeEEEEEeecc
Confidence            99998765   334 4444443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=1.1e-19  Score=153.35  Aligned_cols=198  Identities=12%  Similarity=-0.024  Sum_probs=137.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.++|+||||+|+||+++++.|+++|++|++++|++........    ......+..+|+.|.++++++++       +
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            345799999999999999999999999999999998754332211    01111244679999888876664       7


Q ss_pred             CcEEEECCCCCCCCC---CChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|+|||+||......   ...+.+...+++|+.++.++++++...  +.+..++|++||...  +...         +..
T Consensus       109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~  177 (272)
T 1yb1_A          109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG--HVSV---------PFL  177 (272)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC---CCCH---------HHH
T ss_pred             CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhh--cCCC---------CCc
Confidence            899999999753322   234566788999999977777666431  146679999999876  4321         112


Q ss_pred             Cch-HHHHHHHHHHHHhcc------cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV------NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~------~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ..| .+|...+.....+..      ..+++++++|||.+.++....  ..               .....+++++|+|++
T Consensus       178 ~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~~---------------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          178 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PS---------------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--TH---------------HHHCCCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--cc---------------ccccCCCCHHHHHHH
Confidence            346 667666655544433      248999999999998874211  00               001246899999999


Q ss_pred             HHHHhhCCC
Q 020254          238 IYEALSNPS  246 (328)
Q Consensus       238 ~~~~~~~~~  246 (328)
                      ++.++..+.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.80  E-value=1e-19  Score=156.76  Aligned_cols=214  Identities=12%  Similarity=0.017  Sum_probs=136.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CC--ccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KK--TRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ..++||||||+|+||++++++|+++|++|++++|+..+.......    ..  ......+|+.|.++++++++       
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999987654332110    00  11234679999988877764       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCC--------CCCCcEEEEecccceeecCCCcccc
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--------EGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      ++|+|||+||....   .....+.++..+++|+.++.++++++....        .+..++|++||...  +...     
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~--~~~~-----  159 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA--FLAA-----  159 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGG--TCCC-----
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccc--ccCC-----
Confidence            67999999997533   234557788899999999999988876520        13567999999876  4322     


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHH----HHHcCCCCCC-CCccccc
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF----MMFAGGPLGS-GQQWFSW  228 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~  228 (328)
                          +....| .+|...+...+.+..   ..|+.+++++||.|.++-..........+    .......+.. .......
T Consensus       160 ----~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (319)
T 3ioy_A          160 ----GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFG  235 (319)
T ss_dssp             ----SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSS
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcC
Confidence                223457 777754444433322   24899999999999887432111000000    0000000100 1111123


Q ss_pred             ccHHHHHHHHHHHhhCCC
Q 020254          229 IHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~  246 (328)
                      ++++|+|+.++.+++.+.
T Consensus       236 ~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          236 MEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             BCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            899999999999999853

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.80  E-value=1.7e-19  Score=151.22  Aligned_cols=218  Identities=15%  Similarity=0.083  Sum_probs=143.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.|+++||||+|+||+++++.|+++|++|++++|+........    ..........+|+.|+++++++++       ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999865433221    111111234579999888776654       79


Q ss_pred             cEEEECCCCC-CC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |+|||+||.. ..   .....+.++..+++|+.++.++++++.+.  +.+..++|++||...  +...         +..
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  154 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG--VKGP---------PNM  154 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HSCC---------TTB
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccCC---------CCC
Confidence            9999999964 22   23456778899999999999998887652  134578999999765  3321         223


Q ss_pred             Cch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcch-hh---------hH--H--HH-HHHcCCCCCCCCcc
Q 020254          165 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AK---------MI--P--LF-MMFAGGPLGSGQQW  225 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~---------~~--~--~~-~~~~~~~~~~~~~~  225 (328)
                      ..| .+|...+.....+..   ..|+++++++||.+..+..... ..         +.  +  .. ......|++     
T Consensus       155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----  229 (262)
T 1zem_A          155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-----  229 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-----
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCC-----
Confidence            457 667665555444432   2489999999998876531110 00         00  0  00 111122221     


Q ss_pred             cccccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          226 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                       .+..++|+|++++.++....  ..| ++.+.+|
T Consensus       230 -r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          230 -RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             -SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence             25788999999999987532  334 7766553

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.80  E-value=1.2e-18  Score=148.11  Aligned_cols=217  Identities=13%  Similarity=0.058  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CcccccCC-----CCCccccCceeecC----ChhhHhhcC---
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFP-----GKKTRFFPGVMIAE----EPQWRDCIQ---   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~-----~~~~~~~~~~d~~~----~~~~~~~~~---   88 (328)
                      +.|+++||||+|+||+++++.|+++|++|++++|+. ........     ......+..+|+.|    .++++++++   
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999987 43221110     01111244679999    777776654   


Q ss_pred             ----CCcEEEECCCCCCCCC-------------CChhHHHHHHHhhhhhHHHHHHHHhcCC--CC------CCcEEEEec
Q 020254           89 ----GSTAVVNLAGTPIGTR-------------WSSEIKKEIKESRIRVTSKVVDLINESP--EG------VRPSVLVSA  143 (328)
Q Consensus        89 ----~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~~~~v~~Ss  143 (328)
                          ++|+|||+||......             ...+.+...+++|+.++..+++++....  .+      ..++|++||
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS  181 (288)
T 2x9g_A          102 RAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD  181 (288)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEec
Confidence                7999999999753221             3345667889999999999988876531  22      458999999


Q ss_pred             ccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC
Q 020254          144 TALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL  219 (328)
Q Consensus       144 ~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~  219 (328)
                      ...  +..         .+....| .+|...+.....++.+   .|+++++++||.+.++. ........  ......|+
T Consensus       182 ~~~--~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~--~~~~~~p~  247 (288)
T 2x9g_A          182 AMV--DQP---------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKD--KWRRKVPL  247 (288)
T ss_dssp             TTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHH--HHHHTCTT
T ss_pred             ccc--cCC---------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHH--HHHhhCCC
Confidence            876  432         1233457 7776666555544433   48999999999999886 21111111  11222232


Q ss_pred             CCCCccccc-ccHHHHHHHHHHHhhCCC--CCc-eEEecCCCc
Q 020254          220 GSGQQWFSW-IHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       220 ~~~~~~~~~-i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      +      .+ ..++|+|++++.++....  ..| ++++.+|..
T Consensus       248 ~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          248 G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            2      24 689999999999987532  334 888877753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.80  E-value=5.9e-19  Score=148.52  Aligned_cols=215  Identities=14%  Similarity=0.107  Sum_probs=140.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ++++||||+|+||+++++.|+++|++|++++|++.+.......   ........+|+.|.++++++++       ++|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999999999999999999986543322110   0111244679999988887764       46999


Q ss_pred             EECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCC-cEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           94 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVR-PSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        94 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~-~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ||+||....    .....+.++..+++|+.++..+++++...  +.+.. ++|++||...  +..         .+....
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~--~~~---------~~~~~~  170 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG--KWP---------YPGSHV  170 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG--TSC---------CTTCHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchh--ccC---------CCCCch
Confidence            999997432    23456778899999999988777666431  03456 8999999875  332         122345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|...+.....+..+   .|+++++++||.+.++.....  ........  ....   ....++.++|+|++++.++
T Consensus       171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~--~~~~---~~~~~~~pedvA~~v~~l~  243 (272)
T 2nwq_A          171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGDQARY--DKTY---AGAHPIQPEDIAETIFWIM  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------CCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccchHHH--HHhh---ccCCCCCHHHHHHHHHHHh
Confidence            7 7787777776655543   489999999999987742110  00000000  0000   0112478999999999999


Q ss_pred             hCCC-CCc-eEEecCC
Q 020254          243 SNPS-YRG-VINGTAP  256 (328)
Q Consensus       243 ~~~~-~~g-~~~i~~~  256 (328)
                      ..+. ..| .+.+.++
T Consensus       244 s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          244 NQPAHLNINSLEIMPV  259 (272)
T ss_dssp             TSCTTEEEEEEEEEET
T ss_pred             CCCccCccceEEEeec
Confidence            8654 222 5555443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.80  E-value=2.1e-19  Score=150.60  Aligned_cols=223  Identities=9%  Similarity=-0.009  Sum_probs=145.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-------CCCCCccccCceeecCChhhHhhcC-----
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      ...++++||||+|+||++++++|+++|++|++++|........       ...........+|+.|.++++++++     
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999998864332111       1111112244689999998887764     


Q ss_pred             --CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                        ++|++||+||.....   ....+.++..+++|+.++..+++++.....+..++|++||...  +...         +.
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~--~~~~---------~~  157 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLL--AAYT---------GF  157 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHH--HHHH---------CC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhh--ccCC---------CC
Confidence              789999999975432   3456778889999999999999999873223468999999775  3321         12


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ...| .+|...+.....++.+   .++++.+++||.+..+.....  ......    ...........+..++|+|++++
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~----~~~~~~~~~~r~~~pedvA~~v~  231 (262)
T 3ksu_A          158 YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ--ETKEST----AFHKSQAMGNQLTKIEDIAPIIK  231 (262)
T ss_dssp             CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC--C----------------CCCCSCCGGGTHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CchHHH----HHHHhcCcccCCCCHHHHHHHHH
Confidence            3456 6676666665555443   389999999999876421000  000000    00011111223678899999999


Q ss_pred             HHhhCCC-CCc-eEEecCCCccC
Q 020254          240 EALSNPS-YRG-VINGTAPNPVR  260 (328)
Q Consensus       240 ~~~~~~~-~~g-~~~i~~~~~~~  260 (328)
                      .++.... ..| ++++.+|....
T Consensus       232 ~L~s~~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          232 FLTTDGWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             HHHTTTTTCCSCEEEESTTCCCC
T ss_pred             HHcCCCCCccCCEEEECCCccCC
Confidence            9988622 334 88888876443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.79  E-value=1.3e-18  Score=145.28  Aligned_cols=220  Identities=15%  Similarity=0.081  Sum_probs=146.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC-CCcccccC----CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++++||||+|+||++++++|+++|++|++++++ ........    ..........+|+.|.+.++++++       
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            345789999999999999999999999999987544 33322211    111111134578888877766553       


Q ss_pred             ------CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 ------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 ------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                            ++|++||+||.....   ....+.++..+++|+.++..+++++........++|++||...  +...       
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~--~~~~-------  155 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT--RISL-------  155 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG--TSCC-------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh--ccCC-------
Confidence                  289999999975332   3456677888999999999999999873123458999999876  3321       


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                        +....| .+|...+.....++.+   .++++.+++||.+..+.......-.... ......++      ..+..++|+
T Consensus       156 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dv  227 (255)
T 3icc_A          156 --PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF------NRLGEVEDI  227 (255)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT------SSCBCHHHH
T ss_pred             --CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc------CCCCCHHHH
Confidence              223457 7777766665554443   4899999999999887532211111101 11112222      336789999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCC
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      |++++.++....   .+.++++.+|.
T Consensus       228 a~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          228 ADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHhCcccCCccCCEEEecCCe
Confidence            999999886532   34499998875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.79  E-value=3.7e-19  Score=148.42  Aligned_cols=216  Identities=15%  Similarity=0.091  Sum_probs=146.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .++++||||+|+||++++++|+++|  +.|++++|+.......... .....+..+|+.|.++++++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            4789999999999999999999874  7899999987654332211 0111244679999988877764       7899


Q ss_pred             EEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +||+||....    .....+.++..+++|+.++..+++++...  +.+ .++|++||...  +..         .+....
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~--~~~---------~~~~~~  149 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDAC--NMY---------FSSWGA  149 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCC--CCS---------SCCSHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchh--ccC---------CCCcch
Confidence            9999997422    24456788899999999999999888431  023 78999999875  332         223346


Q ss_pred             h-HHHHHHHHHHHHhccc-CCCeEEEEEeceEEcCCCcch----------hhhHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          167 Y-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGAL----------AKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      | .+|...+.....++.+ .++++.+++||.+.++.....          ......+  ....|.      ..+.+++|+
T Consensus       150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~r~~~p~dv  221 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMF--RGLKEN------NQLLDSSVP  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHH--HHHHTT------C----CHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHH--HHHHhc------CCcCCcccH
Confidence            7 7787777776655544 489999999999998743211          1111111  111121      236789999


Q ss_pred             HHHHHHHhhCCC---CCc-eEEecCCCc
Q 020254          235 VNLIYEALSNPS---YRG-VINGTAPNP  258 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g-~~~i~~~~~  258 (328)
                      |++++.++....   ..| .+++.+++.
T Consensus       222 a~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          222 ATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             HHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             HHHHHHHHhhcccCCCCccEEEecCccc
Confidence            999999987652   344 787776653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.79  E-value=3.2e-19  Score=150.93  Aligned_cols=212  Identities=13%  Similarity=0.036  Sum_probs=141.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-----CccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      ..+++|||||+|+||++++++|+++|++|++++|+...........     .......+|+.|.++++++++       +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999876543322110     000145689999988877664       6


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC--CCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      +|++||+||....    .+...+.++..+++|+.++..+.+++...  ..+  ..++|++||...  +..         .
T Consensus       112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~  180 (281)
T 4dry_A          112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA--QTP---------R  180 (281)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGG--TCC---------C
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHh--CCC---------C
Confidence            8999999997422    23556788899999999988877766542  022  468999999775  321         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      +....| .+|...+.....++.+   .++++.+++||.|..+-......       ..... ........++.++|+|++
T Consensus       181 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~-~~~~~~~~~~~pedvA~~  252 (281)
T 4dry_A          181 PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST-------GVLQA-NGEVAAEPTIPIEHIAEA  252 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C-------EEECT-TSCEEECCCBCHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc-------hhhhh-hhcccccCCCCHHHHHHH
Confidence            233467 7777776666555433   58999999999998763211100       00000 011112236899999999


Q ss_pred             HHHHhhCCCCCceEE
Q 020254          238 IYEALSNPSYRGVIN  252 (328)
Q Consensus       238 ~~~~~~~~~~~g~~~  252 (328)
                      ++.++..+....+.+
T Consensus       253 v~fL~s~~~~~~i~~  267 (281)
T 4dry_A          253 VVYMASLPLSANVLT  267 (281)
T ss_dssp             HHHHHHSCTTEEEEE
T ss_pred             HHHHhCCCccCcccc
Confidence            999999876444433

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.79  E-value=2.3e-18  Score=146.45  Aligned_cols=219  Identities=13%  Similarity=0.085  Sum_probs=147.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCcccccCC-----CCCccccCceeecCCh-------------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP-------------   81 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~~~~-------------   81 (328)
                      ...++++||||+|+||+++++.|+++|++|++++ |+.........     .........+|+.|.+             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            3457899999999999999999999999999999 87654322110     0111124467999988             


Q ss_pred             ----hhHhhcC-------CCcEEEECCCCCCCC---CCC--------------hhHHHHHHHhhhhhHHHHHHHHhcC--
Q 020254           82 ----QWRDCIQ-------GSTAVVNLAGTPIGT---RWS--------------SEIKKEIKESRIRVTSKVVDLINES--  131 (328)
Q Consensus        82 ----~~~~~~~-------~~d~vi~~a~~~~~~---~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~--  131 (328)
                          +++++++       ++|++||+||.....   ...              .+.+...+++|+.++..+++++...  
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                7777664       789999999975322   233              5667888999999999998887642  


Q ss_pred             CCC------CCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC
Q 020254          132 PEG------VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG  201 (328)
Q Consensus       132 ~~~------~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~  201 (328)
                      +.+      ..++|++||...  +..         .+....| .+|...+.....++.+   .++++++++||.+..+. 
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-  234 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-  234 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-
T ss_pred             hcCCCCCCCCcEEEEEechhh--cCC---------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-
Confidence            133      578999999875  332         1233467 7777666655544433   48999999999987664 


Q ss_pred             cchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCCcc
Q 020254          202 GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV  259 (328)
Q Consensus       202 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~~  259 (328)
                      . ..  -... ......|++.     .+..++|+|++++.++....  ..| ++++.+|..+
T Consensus       235 ~-~~--~~~~~~~~~~~p~~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          235 D-MP--PAVWEGHRSKVPLYQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             G-SC--HHHHHHHHTTCTTTT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             c-CC--HHHHHHHHhhCCCCC-----CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            2 11  0111 1122222220     26789999999999987532  344 8888777543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.78  E-value=3.4e-18  Score=145.04  Aligned_cols=203  Identities=12%  Similarity=0.031  Sum_probs=141.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----------CCCccccCceeecCChhhHhhcC-
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQ-   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~-   88 (328)
                      .+.++++||||+|+||++++++|+++|++|++++|+..+...+..           ......+..+|+.|.++++++++ 
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            345799999999999999999999999999999999875332210           01111244579999988877764 


Q ss_pred             ------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccc
Q 020254           89 ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        89 ------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                            ++|++||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +...     
T Consensus        87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~-----  159 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR--LEPK-----  159 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCC--CSGG-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh--ccCC-----
Confidence                  79999999997543   23456778889999999999999988763  134568999999764  2211     


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                         .+....| .+|...+.....++.+   .|+++.+++||.+....      +..... ....+      ...+..++|
T Consensus       160 ---~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~------~~~~~~-~~~~~------~~r~~~ped  223 (285)
T 3sc4_A          160 ---WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA------AVQNLL-GGDEA------MARSRKPEV  223 (285)
T ss_dssp             ---GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH------HHHHHH-TSCCC------CTTCBCTHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH------HHHhhc-ccccc------ccCCCCHHH
Confidence               0122457 7777777666555544   48999999998433221      111110 11111      123678899


Q ss_pred             HHHHHHHHhhCCC
Q 020254          234 IVNLIYEALSNPS  246 (328)
Q Consensus       234 ~a~~~~~~~~~~~  246 (328)
                      +|++++.++..+.
T Consensus       224 vA~~~~~l~s~~~  236 (285)
T 3sc4_A          224 YADAAYVVLNKPS  236 (285)
T ss_dssp             HHHHHHHHHTSCT
T ss_pred             HHHHHHHHhCCcc
Confidence            9999999998764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.78  E-value=2e-17  Score=139.01  Aligned_cols=222  Identities=13%  Similarity=-0.009  Sum_probs=151.1

Q ss_pred             cCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCcc-cccCC-----CCCccccCceeecCChhhHhhcC----
Q 020254           21 ASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        21 ~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      .+.++|+||||+  |+||.+++++|+++|++|++++|+.... .....     ......+..+|+.|.++++++++    
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            345799999999  8999999999999999999999887543 11110     01112255689999888876664    


Q ss_pred             ---CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 ---GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 ---~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                         ++|+|||+||....   .....+.++..+++|+.++.++++++...  ..+..++|++||...  +....       
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~~-------  168 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSG--HIANF-------  168 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSCCS-------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccc--cccCC-------
Confidence               67999999997543   23456778899999999999999887331  035578999999765  32110       


Q ss_pred             CCCCCch-HHHHHHHHHHHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      .+....| .+|...+.....+..+.  .+.+.++.||.+..+-......... .......|.      ..+.+++|+|++
T Consensus       169 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~------~r~~~~~dva~~  241 (267)
T 3gdg_A          169 PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQ-QLWHSMIPM------GRDGLAKELKGA  241 (267)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHH-HHHHTTSTT------SSCEETHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHH-HHHHhcCCC------CCCcCHHHHHhH
Confidence            0123457 77877777766655543  3789999999998764321111110 111222222      336789999999


Q ss_pred             HHHHhhCCC--C-CceEEecCCCc
Q 020254          238 IYEALSNPS--Y-RGVINGTAPNP  258 (328)
Q Consensus       238 ~~~~~~~~~--~-~g~~~i~~~~~  258 (328)
                      ++.++....  . +.++++.+|..
T Consensus       242 ~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          242 YVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             hheeecCccccccCCEEEECCcee
Confidence            999987543  3 44899988753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.77  E-value=4.2e-18  Score=141.81  Aligned_cols=220  Identities=14%  Similarity=0.045  Sum_probs=151.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      .+.|.+|||||++.||+++++.|++.|++|++++|+.....+.... ........+|+.|+++++++++       ++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4557899999999999999999999999999999987654433211 1111244689999988876653       6899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      +||+||....   .+...+.++..+++|+.++..+.+++...-....++|++||...  +..         .|....| .
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~--~~~---------~~~~~~Y~a  175 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG--STG---------TPAFSVYAA  175 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG--GSC---------CTTCHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh--ccC---------CCCchHHHH
Confidence            9999997543   34567889999999999999999988875223357999998764  221         2233467 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh--h--hHH-HH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--K--MIP-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~--~~~-~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      +|.....+...++.+   .|+++..|.||.+..+......  .  ... .. ......|++.      +..++|+|.+++
T Consensus       176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~  249 (273)
T 4fgs_A          176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR------VGRAEEVAAAAL  249 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS------CBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC------CcCHHHHHHHHH
Confidence            777776666555444   4899999999999876421110  0  000 11 1222334432      567899999999


Q ss_pred             HHhhCCC---CCceEEecCCC
Q 020254          240 EALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~  257 (328)
                      .++....   .+.++.+.+|.
T Consensus       250 FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          250 FLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhCchhcCccCCeEeECcCh
Confidence            9986543   34488887764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.77  E-value=3.9e-18  Score=143.49  Aligned_cols=220  Identities=13%  Similarity=0.012  Sum_probs=146.6

Q ss_pred             cCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCcc-cccCCC-CCccccCceeecCChhhHhhcC--------
Q 020254           21 ASQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPG-KKTRFFPGVMIAEEPQWRDCIQ--------   88 (328)
Q Consensus        21 ~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~d~~~~~~~~~~~~--------   88 (328)
                      .+.++++||||  +|+||++++++|+++|++|++++|+..+. ...... .....+..+|+.|+++++++++        
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34578999999  99999999999999999999999987542 222111 1111244679999988877764        


Q ss_pred             --CCcEEEECCCCCCC--------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccccc
Q 020254           89 --GSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                        ++|++||+||....        .....+.+...+++|+.++..+++++........++|++||...  ++.       
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~--~~~-------  155 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS--RAM-------  155 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS--SCC-------
T ss_pred             CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc--ccc-------
Confidence              79999999997531        23456778889999999999999999763111258999998654  331       


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch------hhhH---H-HH-HHHcCCCCCCCC
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL------AKMI---P-LF-MMFAGGPLGSGQ  223 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~------~~~~---~-~~-~~~~~~~~~~~~  223 (328)
                         +....| .+|...+.....++.+   .|+++.+++||.+..+.....      ....   . .. ......|++   
T Consensus       156 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---  229 (269)
T 2h7i_A          156 ---PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG---  229 (269)
T ss_dssp             ---TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC---
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc---
Confidence               223456 6777666655544433   489999999999876521000      0000   0 00 111112222   


Q ss_pred             cccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                        +.+..++|+|++++.++....  ..| ++.+.+|.
T Consensus       230 --rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          230 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             --cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence              125678999999999997543  344 88887764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.77  E-value=8.8e-19  Score=145.65  Aligned_cols=200  Identities=13%  Similarity=0.061  Sum_probs=136.2

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----C-CccccCceee--cCChhhHhhcC----
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K-KTRFFPGVMI--AEEPQWRDCIQ----   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~d~--~~~~~~~~~~~----   88 (328)
                      ....++++||||+|+||++++++|+++|++|++++|+..+.......    . ....+..+|+  .|.++++++++    
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999987654332110    0 0001223444  67776665553    


Q ss_pred             ---CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 ---GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                         ++|++||+||....    .....+.++..+++|+.++..+++++...  +.+..++|++||...  +..        
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~--------  160 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG--RKG--------  160 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGG--TSC--------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhh--cCC--------
Confidence               79999999997422    23456788899999999999999988431  145678999999765  321        


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                       .+....| .+|...+.....++.+    .++++.+++||.+..+-       ...  ..      .......+..++|+
T Consensus       161 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-------~~~--~~------~~~~~~~~~~p~dv  224 (247)
T 3i1j_A          161 -RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-------RAQ--AY------PDENPLNNPAPEDI  224 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-------HHH--HS------TTSCGGGSCCGGGG
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-------chh--cc------cccCccCCCCHHHH
Confidence             1233467 7777766665544432    47899999999876541       110  00      11122346778999


Q ss_pred             HHHHHHHhhCC
Q 020254          235 VNLIYEALSNP  245 (328)
Q Consensus       235 a~~~~~~~~~~  245 (328)
                      |++++.++...
T Consensus       225 a~~~~~l~s~~  235 (247)
T 3i1j_A          225 MPVYLYLMGPD  235 (247)
T ss_dssp             THHHHHHHSGG
T ss_pred             HHHHHHHhCch
Confidence            99999998653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.77  E-value=2.2e-18  Score=146.37  Aligned_cols=200  Identities=14%  Similarity=0.049  Sum_probs=137.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----C-CccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K-KTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      ...++|+||||+|+||+++++.|+++|++|++++|++.+.......    . ....+..+|+.|.++++++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4467999999999999999999999999999999987654322110    0 011144578988888776664       


Q ss_pred             CCcEEEEC-CCCCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 GSTAVVNL-AGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 ~~d~vi~~-a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ++|+|||+ ++....  .....+.....+++|+.++.++++++... ..+.+++|++||...  +..         .+..
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  174 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG--KVA---------YPMV  174 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG--TSC---------CTTC
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccc--ccC---------CCCc
Confidence            79999999 565322  12345677889999999999998887542 113468999999875  432         1233


Q ss_pred             Cch-HHHHHHHHHHHHhcc-----cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..| .+|...+.....+..     ..++++++++||.+.++..       ..  ..      .+.....+++++|+|+.+
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-------~~--~~------~~~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-------MK--AV------SGIVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-------HH--HS------CGGGGGGCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-------HH--hc------cccccCCCCCHHHHHHHH
Confidence            457 677666655544332     3489999999999876521       00  00      011124578999999999


Q ss_pred             HHHhhCCC
Q 020254          239 YEALSNPS  246 (328)
Q Consensus       239 ~~~~~~~~  246 (328)
                      +.++..+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99998754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.77  E-value=1.4e-17  Score=144.52  Aligned_cols=212  Identities=13%  Similarity=0.078  Sum_probs=145.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----------CCCccccCceeecCChhhHhhcC--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQ--   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~--   88 (328)
                      ..++||||||+|.||.+++++|+++|++|++++|+..+...+..           .........+|+.|.++++++++  
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999875433211           11111234579999988877764  


Q ss_pred             -----CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccccc
Q 020254           89 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                           ++|+|||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +...      
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~--~~~~------  195 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN--LNPV------  195 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC--CCGG------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH--cCCC------
Confidence                 79999999997533   23456778899999999999999988542  145679999999765  3321      


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                       ..+....| .+|...+.....++.+  .++.+.++.||.+....      +..   ...+.     .....+..++|+|
T Consensus       196 -~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~------~~~---~~~~~-----~~~~r~~~pedvA  260 (346)
T 3kvo_A          196 -WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA------AMD---MLGGP-----GIESQCRKVDIIA  260 (346)
T ss_dssp             -GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH------HHH---HHCC-------CGGGCBCTHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH------HHH---hhccc-----cccccCCCHHHHH
Confidence             01233457 7777766665555443  48999999999644331      111   11111     1123467899999


Q ss_pred             HHHHHHhhCCC-CCceEEecCC
Q 020254          236 NLIYEALSNPS-YRGVINGTAP  256 (328)
Q Consensus       236 ~~~~~~~~~~~-~~g~~~i~~~  256 (328)
                      ++++.++.... ..|.+.+.++
T Consensus       261 ~~v~~L~s~~~~itG~~ivdgg  282 (346)
T 3kvo_A          261 DAAYSIFQKPKSFTGNFVIDEN  282 (346)
T ss_dssp             HHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHhcCCCCCceEEECCc
Confidence            99999998733 4554435443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.77  E-value=8e-18  Score=138.77  Aligned_cols=220  Identities=15%  Similarity=0.077  Sum_probs=150.2

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.+.|.++||||++.||+++++.|+++|.+|++++|+.....+...    .........+|+.|+++++++++       
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3456899999999999999999999999999999998765433321    12222245689999998876663       


Q ss_pred             CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|++||+||....    .+...+.++..+++|+.++..+.+++.+.  +++..++|++||...  +..         .+
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g--~~~---------~~  152 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG--IRG---------GF  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCS---------SS
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh--cCC---------CC
Confidence            78999999996432    34567889999999999988887776552  145678999999764  221         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hh-hHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AK-MIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                      ....| .+|.....+...++.+   +|+++..|.||.|-.+-....   .. ...... ....|++      -+-.++|+
T Consensus       153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~------R~g~pedi  225 (254)
T 4fn4_A          153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLT-KLMSLSS------RLAEPEDI  225 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHH-HHHTTCC------CCBCHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHH-hcCCCCC------CCcCHHHH
Confidence            23457 7776666655554443   489999999999987632110   01 111111 0111111      15678999


Q ss_pred             HHHHHHHhhCCC---CCceEEecCCC
Q 020254          235 VNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       235 a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                      |.+++.++....   .+.++.+.+|-
T Consensus       226 A~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          226 ANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCCcCCEEEeCCCc
Confidence            999999986543   34488887764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.77  E-value=8.3e-18  Score=137.42  Aligned_cols=219  Identities=17%  Similarity=0.130  Sum_probs=150.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      .+.|.++||||++.||+++++.|++.|.+|++.+|+....  ..............+|+.|+++++++++  ++|++||+
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            3568999999999999999999999999999999986431  1111222222245689999998888775  69999999


Q ss_pred             CCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           97 AGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        97 a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      ||....   .+...++++.++++|+.++..+.+++.+.   +....++|.+||...  +..         .+....| .+
T Consensus        87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~--~~g---------~~~~~~Y~as  155 (247)
T 4hp8_A           87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS--FQG---------GIRVPSYTAA  155 (247)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CSSCHHHHHH
T ss_pred             CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh--CCC---------CCCChHHHHH
Confidence            997544   34567889999999999998888765431   123568999999764  221         1233467 77


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      |.........++.+   +|+++..|.||.|-.+.......--... ......|++.      +-.++|+|.+++.++...
T Consensus       156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR------WGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS------CBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC------CcCHHHHHHHHHHHhCch
Confidence            76666655544443   4899999999999776421111001111 2233444432      567899999999988654


Q ss_pred             C--CCc-eEEecCC
Q 020254          246 S--YRG-VINGTAP  256 (328)
Q Consensus       246 ~--~~g-~~~i~~~  256 (328)
                      .  ..| ++.+.+|
T Consensus       230 a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          230 ADYVHGAILNVDGG  243 (247)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCcCCeEEECcc
Confidence            3  334 8887766

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.76  E-value=3.6e-18  Score=140.92  Aligned_cols=220  Identities=12%  Similarity=0.055  Sum_probs=150.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.|.++||||++.||+++++.|+++|++|++.+|+.....+..    ..........+|+.|+++++++++       +
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            35689999999999999999999999999999999876543321    112222345689999988876653       6


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      +|++||+||....   .+...+.++..+++|+.++..+.+++.+.   +.+..++|++||...  +..         .|.
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~--~~~---------~~~  155 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS--QAA---------RPT  155 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSB---------CTT
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh--cCC---------CCC
Confidence            8999999997544   34567889999999999988887766432   134568999999765  221         122


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ...| .+|.........++.+   +|+++..|.||.|..+.......--... ......|++.      +..++|+|.++
T Consensus       156 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R------~g~pediA~~v  229 (255)
T 4g81_D          156 VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR------WGRPEELIGTA  229 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS------CBCGGGGHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC------CcCHHHHHHHH
Confidence            3457 6776666665555443   4899999999999876321110000001 1122334332      56789999999


Q ss_pred             HHHhhCCC---CCceEEecCCC
Q 020254          239 YEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +.++....   .+..+.+.+|-
T Consensus       230 ~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          230 IFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCCEEEECCCe
Confidence            99886533   34488887763

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.75  E-value=1.6e-17  Score=140.04  Aligned_cols=201  Identities=16%  Similarity=0.092  Sum_probs=138.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----------CCccccCceeecCChhhHhhcC--
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----------KKTRFFPGVMIAEEPQWRDCIQ--   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--   88 (328)
                      +.++++||||+|.||++++++|+++|++|++++|+..+.......           ........+|+.|.++++++++  
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999998653332111           1111234679999988877664  


Q ss_pred             -----CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccccc
Q 020254           89 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                           ++|++||+||....   .....+.++..+++|+.++..+++++...  +.+..++|++||...  +....     
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~~-----  157 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS--LNPAW-----  157 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC--CCHHH-----
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh--cCCCC-----
Confidence                 78999999997533   23456778889999999999998887542  245678999999765  32100     


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  234 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  234 (328)
                        .+....| .+|...+.....++.+   .|+++.+++||.+.....      ..   ....      .....+..++|+
T Consensus       158 --~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~------~~---~~~~------~~~~~~~~pedv  220 (274)
T 3e03_A          158 --WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA------IN---MLPG------VDAAACRRPEIM  220 (274)
T ss_dssp             --HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------C------CCGGGSBCTHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch------hh---hccc------ccccccCCHHHH
Confidence              1122357 7777666665544443   489999999995443321      00   0111      112236789999


Q ss_pred             HHHHHHHhhCCC
Q 020254          235 VNLIYEALSNPS  246 (328)
Q Consensus       235 a~~~~~~~~~~~  246 (328)
                      |++++.++....
T Consensus       221 A~~v~~l~s~~~  232 (274)
T 3e03_A          221 ADAAHAVLTREA  232 (274)
T ss_dssp             HHHHHHHHTSCC
T ss_pred             HHHHHHHhCccc
Confidence            999999997654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.75  E-value=6.6e-18  Score=142.92  Aligned_cols=220  Identities=15%  Similarity=0.061  Sum_probs=145.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      ..++++||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.++++++++       ++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            457899999999999999999999999999999987654433211 1111244579999887776653       78999


Q ss_pred             EECCCCCCCC--------CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           94 VNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        94 i~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ||+||.....        ....+.++..+++|+.++..+++++... .....++|++||...  +...         +..
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~  152 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAG--FYPN---------GGG  152 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG--TSSS---------SSC
T ss_pred             EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchh--ccCC---------CCC
Confidence            9999974221        1112457788999999999999887652 112368999999875  3211         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcchh-----hhH---HHH-HHHcCCCCCCCCcccccccHH
Q 020254          165 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALA-----KMI---PLF-MMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~-----~~~---~~~-~~~~~~~~~~~~~~~~~i~v~  232 (328)
                      ..| .+|...+.....++.+  .++++.+++||.+..+-.....     ...   +.. ......|+      ..+..++
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe  226 (281)
T 3zv4_A          153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI------GRMPALE  226 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT------SSCCCGG
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC------CCCCCHH
Confidence            457 7787777666555543  2499999999999876321100     000   000 11122222      2367889


Q ss_pred             HHHHHHHHHhhCCC---CCc-eEEecCCCc
Q 020254          233 DIVNLIYEALSNPS---YRG-VINGTAPNP  258 (328)
Q Consensus       233 D~a~~~~~~~~~~~---~~g-~~~i~~~~~  258 (328)
                      |+|.+++.++..+.   ..| ++++.+|..
T Consensus       227 dvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          227 EYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             GGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             HHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            99999999998332   344 899988753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.74  E-value=6.4e-17  Score=134.81  Aligned_cols=221  Identities=11%  Similarity=0.013  Sum_probs=147.4

Q ss_pred             ccCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC----
Q 020254           20 KASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      ..+.|+++||||+|  .||.++++.|+++|++|++.+|+.....+....     ........+|+.|+++++++++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            44568999999887  899999999999999999999987654332110     1111244689999888776653    


Q ss_pred             ---CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccccc
Q 020254           89 ---GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        89 ---~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                         ++|++||+||....       .+...+.+...+++|+.++..+..++........++|++||.... ++        
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~-~~--------  153 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE-FA--------  153 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT-SC--------
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc-cC--------
Confidence               79999999996432       123345566778899999988888877643445689999997641 22        


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHH
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                        .+....| .+|.........++.+   +|+++.+|.||.+-.+........-... ......|++.      +..++|
T Consensus       154 --~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R------~g~pee  225 (256)
T 4fs3_A          154 --VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR------NVDQVE  225 (256)
T ss_dssp             --CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS------CCCHHH
T ss_pred             --cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC------CcCHHH
Confidence              1233457 6776666655544443   4899999999998776322111111111 1222334432      567899


Q ss_pred             HHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          234 IVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       234 ~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +|.+++.++....  ..| ++.+.+|-
T Consensus       226 vA~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          226 VGKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCccCCEEEECcCH
Confidence            9999999986533  334 88887763

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.74  E-value=5.9e-17  Score=146.79  Aligned_cols=219  Identities=15%  Similarity=0.137  Sum_probs=148.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCccc-------ccCCCCCccccCceeecCChhhHhhcCC----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQG----   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~----   89 (328)
                      ..++||||||+|+||.+++++|+++|+ +|++++|+.....       ++........+..+|+.|.+++.+++++    
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            457999999999999999999999998 4999999875321       1111111122456899999998888764    


Q ss_pred             --CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 --STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 --~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                        +|+|||+||.....   ....+....+++.|+.++.++.+++..  .+.++||++||.+.. +|..          ..
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~V~~SS~a~~-~g~~----------g~  371 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASA-FGAP----------GL  371 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TCCT----------TC
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc--CCCCEEEEEcChHhc-CCCC----------CC
Confidence              49999999975432   345677788899999999999999988  678899999997541 4422          23


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      ..| .+|...+.....+. ..|+++++++||.+.+.+...  ...       ...+  ......+++.+|+++++..++.
T Consensus       372 ~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~--~~~-------~~~~--~~~g~~~i~~e~~a~~l~~~l~  439 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAE--GPV-------ADRF--RRHGVIEMPPETACRALQNALD  439 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---------------------C--TTTTEECBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccc--hhH-------HHHH--HhcCCCCCCHHHHHHHHHHHHh
Confidence            457 66766665544443 359999999999988764210  000       0001  1123567999999999999998


Q ss_pred             CCCCCceEEecCCCccCHHHHHHHHHH
Q 020254          244 NPSYRGVINGTAPNPVRLAEMCDHLGN  270 (328)
Q Consensus       244 ~~~~~g~~~i~~~~~~~~~e~~~~i~~  270 (328)
                      .+..  .+.+.   .+.+..|...+..
T Consensus       440 ~~~~--~~~v~---~~d~~~~~~~~~~  461 (486)
T 2fr1_A          440 RAEV--CPIVI---DVRWDRFLLAYTA  461 (486)
T ss_dssp             TTCS--SCEEC---EECHHHHHHHHTS
T ss_pred             CCCC--eEEEE---eCCHHHHhhhhcc
Confidence            7542  22232   2566666655443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.74  E-value=1.4e-17  Score=143.18  Aligned_cols=213  Identities=14%  Similarity=0.111  Sum_probs=140.9

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCC-hhhHhhc------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEE-PQWRDCI------   87 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~-~~~~~~~------   87 (328)
                      +...++|+||||+|+||.+++++|+++|++|++++|+..+.....    ... ....+..+|+.|. +.++.++      
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            345678999999999999999999999999999999876532221    111 1112446799998 7666554      


Q ss_pred             -CCCcEEEECCCCCCC---------------------------------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--
Q 020254           88 -QGSTAVVNLAGTPIG---------------------------------TRWSSEIKKEIKESRIRVTSKVVDLINES--  131 (328)
Q Consensus        88 -~~~d~vi~~a~~~~~---------------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--  131 (328)
                       .++|+|||+||....                                 .....+..+..+++|+.++..+++++...  
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence             379999999997521                                 12244566778999999988888877542  


Q ss_pred             CCCCCcEEEEecccceeecCCCcc-------------------------------cccCCC--CCCCch-HHHHHHHHHH
Q 020254          132 PEGVRPSVLVSATALGYYGTSETE-------------------------------VFDESS--PSGNDY-LAEVCREWEG  177 (328)
Q Consensus       132 ~~~~~~~v~~Ss~~v~~yg~~~~~-------------------------------~~~e~~--~~~~~y-~~k~~~~~~~  177 (328)
                      +.+..++|++||.... ++.....                               ......  +....| .+|...+...
T Consensus       169 ~~~~~~IV~isS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGS-LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TSSSCEEEEECCGGGS-GGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcc-cccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            1456799999997651 2211100                               000111  123457 7888877777


Q ss_pred             HHhcccC-CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCceEEec
Q 020254          178 TALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGT  254 (328)
Q Consensus       178 ~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~~i~  254 (328)
                      ..++.+. ++.+.+++||.|..+-...                      ......++.++.++.++..+.  ..|.|...
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~  305 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNYG----------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDC  305 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGTT----------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC
T ss_pred             HHHHhhcCCceEEEecCCceecCCcCC----------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEecc
Confidence            6666554 6899999999987652100                      113578899999999887654  34555554


Q ss_pred             C
Q 020254          255 A  255 (328)
Q Consensus       255 ~  255 (328)
                      +
T Consensus       306 s  306 (311)
T 3o26_A          306 S  306 (311)
T ss_dssp             -
T ss_pred             c
Confidence            4

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.74  E-value=1.2e-17  Score=138.33  Aligned_cols=221  Identities=16%  Similarity=0.099  Sum_probs=149.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc---CCCCCccccCceeecCChhhHhhcC-------CC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+.|.++||||++.||+++++.|++.|.+|++++|+.......   ...........+|+.|+++++++++       ++
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            3568999999999999999999999999999999987653221   1111112245689999887776653       79


Q ss_pred             cEEEECCCCCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           91 TAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        91 d~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      |++||+||....  .+...+.+...+++|+.++..+.+++.+. +.+..++|++||...  +...         +....|
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~--~~~~---------~~~~~Y  153 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA--VTGQ---------GNTSGY  153 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH--HHCC---------SSCHHH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh--ccCC---------CCchHH
Confidence            999999997433  24456788999999999988887776542 123468999999765  2211         223457


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhH---HHH-HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMI---PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                       .+|.........++.+   +|+++..|.||.|..+..... ...-   ... ......|++     .-+..++|+|.++
T Consensus       154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg-----~R~g~peeiA~~v  228 (258)
T 4gkb_A          154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG-----RRFTTPDEIADTA  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT-----TSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC-----CCCcCHHHHHHHH
Confidence             7776666665555443   489999999999987642111 0000   001 122233332     1257799999999


Q ss_pred             HHHhhCCC---CCceEEecCCC
Q 020254          239 YEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       239 ~~~~~~~~---~~g~~~i~~~~  257 (328)
                      +.++....   .+.++.+.+|.
T Consensus       229 ~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          229 VFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhcCccCCeEEECCCc
Confidence            99886543   34488887774

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.74  E-value=1.2e-16  Score=132.89  Aligned_cols=213  Identities=16%  Similarity=0.124  Sum_probs=144.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|++|||||++.||+++++.|+++|++|++.+|+......  ..    ....+|+.|+++++++++       ++|++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~--~~----~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP--EE----LFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC--TT----TEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC--cE----EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45799999999999999999999999999999997643211  11    145689999887776653       689999


Q ss_pred             ECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC-CCc
Q 020254           95 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS-GND  166 (328)
Q Consensus        95 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~-~~~  166 (328)
                      |+||....     .+...+.++..+++|+.++..+.+++...  +.+..++|++||.... .+          .|. ...
T Consensus        84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~-~~----------~~~~~~~  152 (261)
T 4h15_A           84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV-LP----------LPESTTA  152 (261)
T ss_dssp             ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-SC----------CTTTCHH
T ss_pred             ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc-cC----------CCCccHH
Confidence            99996422     24556888999999999988877766542  1456789999997641 22          111 234


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-h-----------hHHHH-HHHcCCCCCCCCcccccc
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-K-----------MIPLF-MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~-----------~~~~~-~~~~~~~~~~~~~~~~~i  229 (328)
                      | .+|.........++.+   +|+++.+|.||.|-.+...... .           .-... ......|++      -+.
T Consensus       153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g  226 (261)
T 4h15_A          153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG------RPA  226 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS------SCB
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC------CCc
Confidence            6 5676666655544443   4899999999998765211000 0           00001 111222332      267


Q ss_pred             cHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          230 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .++|+|.+++.++....  ..| .+.+.+|-
T Consensus       227 ~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          227 KPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            89999999999886533  334 88887764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.73  E-value=2.9e-17  Score=141.88  Aligned_cols=217  Identities=14%  Similarity=0.055  Sum_probs=139.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----------CCCccccCceeecCChhhHhhcC----
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----------GKKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      .++|+||||+|+||++++++|+++|++|++++|+.........          .........+|+.|.++++++++    
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            3589999999999999999999999999888876544322110          00111244579999998888775    


Q ss_pred             -CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                       ++|+|||+||.....   ....+.++..+++|+.++.++++++...  +.+..++|++||...  +..         .+
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~--~~~---------~~  150 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG--LMG---------LP  150 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG--TSC---------CT
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccc--ccC---------CC
Confidence             489999999974322   3456778899999999999999986321  035679999999875  321         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhh------------HHHHHHHcCCCCCCCCccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM------------IPLFMMFAGGPLGSGQQWF  226 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~  226 (328)
                      ....| .+|...+.....+..+   .|+++++++||.|..+-.......            ...+......  ......+
T Consensus       151 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  228 (327)
T 1jtv_A          151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAH--SKQVFRE  228 (327)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHH--HHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHH--HHHhhhh
Confidence            23467 7787777666555542   589999999999987642111000            0000000000  0000001


Q ss_pred             ccccHHHHHHHHHHHhhCCCCCceEE
Q 020254          227 SWIHLDDIVNLIYEALSNPSYRGVIN  252 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~~~g~~~  252 (328)
                      -...++|+|++++.++..+.....|.
T Consensus       229 ~~~~pedvA~~i~~l~~~~~~~~~~~  254 (327)
T 1jtv_A          229 AAQNPEEVAEVFLTALRAPKPTLRYF  254 (327)
T ss_dssp             HCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred             cCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence            12589999999999998754333443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.72  E-value=2.4e-16  Score=134.54  Aligned_cols=218  Identities=11%  Similarity=0.013  Sum_probs=139.5

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCC-----------CcccccCC--CCC--c-ccc-----------
Q 020254           22 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELIFP--GKK--T-RFF-----------   72 (328)
Q Consensus        22 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~--~~~--~-~~~-----------   72 (328)
                      ..++++||||+  |+||+++++.|+++|++|++++|++           .+......  ...  . ...           
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence            45789999999  9999999999999999999998642           11111100  000  0 000           


Q ss_pred             -CceeecC--------ChhhHhhc-------CCCcEEEECCCCCC-----CCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           73 -PGVMIAE--------EPQWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        73 -~~~d~~~--------~~~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                       ...|+.|        .+++++++       .++|++||+||...     ......+.++..+++|+.++..+++++...
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             1122222        44555444       37899999998532     133456778899999999999999999873


Q ss_pred             CCCCCcEEEEecccceeecCCCcccccCCCCCC-Cch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCCcchh
Q 020254          132 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALA  205 (328)
Q Consensus       132 ~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~~  205 (328)
                      -....++|++||...  +...         +.. ..| .+|...+.....++.+    .|+++++++||.+.++......
T Consensus       167 m~~~g~iv~isS~~~--~~~~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~  235 (297)
T 1d7o_A          167 MNPGGASISLTYIAS--ERII---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             EEEEEEEEEEECGGG--TSCC---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             hccCceEEEEecccc--ccCC---------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc
Confidence            111258999999765  3211         222 357 7787777666555433    4899999999999988543210


Q ss_pred             hhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC---CCceEEecCCC
Q 020254          206 KMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  257 (328)
Q Consensus       206 ~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~~i~~~~  257 (328)
                       ..+..  ......|++      .+..++|+|++++.++....   .+.++++.+|.
T Consensus       236 -~~~~~~~~~~~~~p~~------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          236 -FIDTMIEYSYNNAPIQ------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             -HHHHHHHHHHHHSSSC------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             -ccHHHHHHhhccCCCC------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence             11111  111122322      25789999999999886432   33488888874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.72  E-value=2e-16  Score=143.87  Aligned_cols=218  Identities=17%  Similarity=0.175  Sum_probs=151.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCccc-------ccCCCCCccccCceeecCChhhHhhcCC--Cc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQG--ST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d   91 (328)
                      ..++||||||+|+||.+++++|.++|+ +|++++|+.....       ++........+..+|+.|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            457999999999999999999999998 6999999864321       1111111122446899999999988864  99


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCC-CCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +|||+||.....   ....+....+++.|+.++.++.+++..  . +.++||++||... .+|..          ....|
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~~V~~SS~a~-~~g~~----------g~~~Y  404 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTAD--IKGLDAFVLFSSVTG-TWGNA----------GQGAY  404 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS--CTTCCCEEEEEEGGG-TTCCT----------TBHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh--ccCCCEEEEEeCHHh-cCCCC----------CCHHH
Confidence            999999975432   345567788899999999999999877  4 6789999999753 15532          22457


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhH-HHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                       .+|...+.....+. ..|+++++++||.+.+.+..  .... ..+. .         .....++.+|+++++..++..+
T Consensus       405 aaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~--~~~~~~~~~-~---------~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          405 AAANAALDALAERRR-AAGLPATSVAWGLWGGGGMA--AGAGEESLS-R---------RGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCC--CCHHHHHHH-H---------HTBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccc--ccccHHHHH-h---------cCCCCCCHHHHHHHHHHHHhCC
Confidence             77777776665544 35999999999988433211  1111 1111 1         1134689999999999999875


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGN  270 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~  270 (328)
                      .  ..+.+..   +.+..+...+..
T Consensus       472 ~--~~v~v~~---~d~~~~~~~~~~  491 (511)
T 2z5l_A          472 D--VCVTVVD---VDWERFAPATNA  491 (511)
T ss_dssp             C--SEEEECC---BCHHHHHHHHHH
T ss_pred             C--CEEEEEe---CCHHHHHhhhcc
Confidence            4  2333332   556666665543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.72  E-value=2.6e-17  Score=137.73  Aligned_cols=203  Identities=12%  Similarity=0.015  Sum_probs=137.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC-----
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      .++++||||+|+||++++++|++   +|++|++++|+..........      ........+|+.|+++++++++     
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            46899999999999999999999   899999999987543322110      1111244579999887776552     


Q ss_pred             ----CCc--EEEECCCCCCCC-----C-CChhHHHHHHHhhhhhHHHHHHHHhcCC--C--CCCcEEEEecccceeecCC
Q 020254           89 ----GST--AVVNLAGTPIGT-----R-WSSEIKKEIKESRIRVTSKVVDLINESP--E--GVRPSVLVSATALGYYGTS  152 (328)
Q Consensus        89 ----~~d--~vi~~a~~~~~~-----~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~--~~~~~v~~Ss~~v~~yg~~  152 (328)
                          ++|  ++||+||.....     + ...+.++..+++|+.++..+++++....  .  +..++|++||...  +.. 
T Consensus        86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~--~~~-  162 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQP-  162 (259)
T ss_dssp             CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--TSC-
T ss_pred             cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh--cCC-
Confidence                468  999999974221     1 4567788999999999999999987631  2  3357999999876  432 


Q ss_pred             CcccccCCCCCCCch-HHHHHHHHHHHHhcccC-CCeEEEEEeceEEcCCCcch------hhhHHHHHHHcCCCCCCCCc
Q 020254          153 ETEVFDESSPSGNDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPLGSGQQ  224 (328)
Q Consensus       153 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~  224 (328)
                              .+....| .+|...+.....++.+. ++++.+++||.+-.+.....      ......+.  ...|      
T Consensus       163 --------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~p------  226 (259)
T 1oaa_A          163 --------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ--KLKS------  226 (259)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH--HHHH------
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHH--Hhhh------
Confidence                    1233467 77877777766655543 48899999998755421000      00000010  0001      


Q ss_pred             ccccccHHHHHHHHHHHhhC
Q 020254          225 WFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       225 ~~~~i~v~D~a~~~~~~~~~  244 (328)
                      ...+..++|+|++++.++..
T Consensus       227 ~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          227 DGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHH
T ss_pred             cCCcCCHHHHHHHHHHHHhh
Confidence            12368899999999999874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.72  E-value=2.6e-18  Score=148.42  Aligned_cols=166  Identities=14%  Similarity=0.137  Sum_probs=115.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCC--ccc----ccCCCCCccccCceeecCChhhHhhcC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRS--KAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQ   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~   88 (328)
                      ++|||+||||+||||++++..|+++|+       +|+++++.+.  ...    .+....  ..+. .|+.+.+++.++++
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~--~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTE-EEEEEESCHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc--cccc-CCeEeccChHHHhC
Confidence            457999999999999999999999986       8999998642  111    111100  0122 47777777888899


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CC-cEEEEecccceeecCCCcccc-cCC---CC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VR-PSVLVSATALGYYGTSETEVF-DES---SP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~-~~v~~Ss~~v~~yg~~~~~~~-~e~---~~  162 (328)
                      ++|+|||+||.....   ...+.+.++.|+.+++++++++++  .+ .+ +++++|+...      ...+. .+.   .+
T Consensus        80 ~~D~Vih~Ag~~~~~---~~~~~~~~~~Nv~~t~~l~~a~~~--~~~~~~~vvv~snp~~------~~~~~~~~~~~~~~  148 (327)
T 1y7t_A           80 DADYALLVGAAPRKA---GMERRDLLQVNGKIFTEQGRALAE--VAKKDVKVLVVGNPAN------TNALIAYKNAPGLN  148 (327)
T ss_dssp             TCSEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HSCTTCEEEECSSSHH------HHHHHHHHTCTTSC
T ss_pred             CCCEEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hcCCCeEEEEeCCchh------hhHHHHHHHcCCCC
Confidence            999999999975322   245678899999999999999998  43 44 5665555321      00111 111   23


Q ss_pred             CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCC
Q 020254          163 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG  201 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~  201 (328)
                      +...| ..|...+.....+....|++++++|+++|||+++
T Consensus       149 p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          149 PRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             hhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            33456 6677667666666656699999999999999975

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.70  E-value=1.1e-16  Score=137.70  Aligned_cols=204  Identities=16%  Similarity=0.113  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC---------CCcccccC----CCCCccccCceeecCChhhHhhc-
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS---------RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-   87 (328)
                      ..++++||||+|+||+++++.|+++|++|++++|.         ..+.....    ....   ...+|+.+.+++++++ 
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHHHHH
Confidence            45789999999999999999999999999998663         22211111    0110   1236888877665543 


Q ss_pred             ------CCCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc
Q 020254           88 ------QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        88 ------~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                            .++|+|||+||.....   ....+.++..+++|+.++..+++++...  ..+..++|++||.... ++.     
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~-~~~-----  158 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI-YGN-----  158 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc-cCC-----
Confidence                  3799999999975432   3456778899999999998888877431  1356789999996531 442     


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHH
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  232 (328)
                           +....| .+|...+.....+..+   .|+.+++++||.+ .+..   ....+             .....++.++
T Consensus       159 -----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~---~~~~~-------------~~~~~~~~p~  216 (319)
T 1gz6_A          159 -----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT---ETVMP-------------EDLVEALKPE  216 (319)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT---GGGSC-------------HHHHHHSCGG
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc---cccCC-------------hhhhccCCHH
Confidence                 123457 7777766665554433   4899999999986 3211   11100             0112356889


Q ss_pred             HHHHHHHHHhhCCC--CCceEEecCC
Q 020254          233 DIVNLIYEALSNPS--YRGVINGTAP  256 (328)
Q Consensus       233 D~a~~~~~~~~~~~--~~g~~~i~~~  256 (328)
                      |+|.+++.++..+.  .+.+|++.++
T Consensus       217 dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          217 YVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHhCchhhcCCCEEEECCC
Confidence            99999999987643  3347777665

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.70  E-value=8.3e-17  Score=134.70  Aligned_cols=210  Identities=14%  Similarity=0.024  Sum_probs=134.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCChhhHhhc--------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI--------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~--------~~   89 (328)
                      +.++++||||+|+||+++++.|+++|++|++++|+..........    ........+|+.|++++++++        .+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            347899999999999999999999999999999986543322110    111124457999988776554        35


Q ss_pred             CcEEEECCCC--C--------CCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccc
Q 020254           90 STAVVNLAGT--P--------IGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        90 ~d~vi~~a~~--~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                      +|++||+||.  .        .......+.+...+++|+.++..+..++...  ..+..++|++||...  +...     
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~-----  156 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS--LQYM-----  156 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGG--TSCC-----
T ss_pred             ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhh--cCCC-----
Confidence            7999999942  1        1123455678889999999987776655421  145678999999876  4311     


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCC-CCCcccccccHH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG-SGQQWFSWIHLD  232 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~  232 (328)
                           +...| .+|...+.....+..   ..|+++++++||.+..+.....   ............. .......+..++
T Consensus       157 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pe  228 (260)
T 2qq5_A          157 -----FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH---MAKEEVLQDPVLKQFKSAFSSAETTE  228 (260)
T ss_dssp             -----SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------------CHHHHHH
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh---hccccccchhHHHHHHhhhccCCCHH
Confidence                 22457 778777766655543   2489999999999987742111   0000000000000 000011246789


Q ss_pred             HHHHHHHHHhhCCC
Q 020254          233 DIVNLIYEALSNPS  246 (328)
Q Consensus       233 D~a~~~~~~~~~~~  246 (328)
                      |+|++++.++..+.
T Consensus       229 ~va~~v~~l~s~~~  242 (260)
T 2qq5_A          229 LSGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHhcCcc
Confidence            99999999987653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.69  E-value=2.1e-16  Score=141.90  Aligned_cols=217  Identities=14%  Similarity=0.057  Sum_probs=144.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc--ccCCCCCccccCceeecCChhhHhhcC-------C-Cc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G-ST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~-~d   91 (328)
                      ..++++||||+|.||.+++++|+++|++|++++|+.....  ....... .....+|+.|.++++++++       + +|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~-~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG-GTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHT-CEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            4579999999999999999999999999999998753211  1100000 0144689999998877663       3 99


Q ss_pred             EEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +|||+||.....   ....+.++..+++|+.++.++.+++...  ..+..+||++||.... .+.          +....
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~-~g~----------~g~~~  359 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI-AGN----------RGQTN  359 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH-HCC----------TTCHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC-CCC----------CCCHH
Confidence            999999976442   3556788899999999999999998863  1256789999997651 332          22346


Q ss_pred             h-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|...+.....+..   ..|+++++++||.+.++............ .....++      ..+...+|+++++..++
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~l------~r~g~pedvA~~v~fL~  432 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREV-GRRLNSL------FQGGQPVDVAELIAYFA  432 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHH-HHHSBTT------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHH-HHhhccc------cCCCCHHHHHHHHHHHh
Confidence            7 777755555544433   25899999999999876432111000000 0111111      22467899999999998


Q ss_pred             hCCC---CCceEEecCCC
Q 020254          243 SNPS---YRGVINGTAPN  257 (328)
Q Consensus       243 ~~~~---~~g~~~i~~~~  257 (328)
                      ....   .+.++++.++.
T Consensus       433 s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          433 SPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             CGGGTTCCSCEEEESSSB
T ss_pred             CCccCCCCCcEEEECCcc
Confidence            7533   33488887764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.64  E-value=3.5e-15  Score=134.79  Aligned_cols=200  Identities=16%  Similarity=0.132  Sum_probs=141.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccc-------cCCCCCccccCceeecCChhhHhhcC------
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      .+++|||||+|.||.+++++|+++|+ +|++++|+......       +........+..+|+.|.+++.++++      
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            37999999999999999999999998 88888887543211       11111122245689999998887774      


Q ss_pred             CCcEEEECCCCC-CC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 GSTAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 ~~d~vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ++|+|||+||.. ..   .....+....+++.|+.++.++.+++..  ....+||++||... .+|.          +..
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~--~~~~~iV~~SS~a~-~~g~----------~g~  385 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD--LDLDAFVLFSSGAA-VWGS----------GGQ  385 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT--SCCSEEEEEEEHHH-HTTC----------TTC
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEEEeChHh-cCCC----------CCc
Confidence            479999999975 22   3445677889999999999999999988  67789999999764 1442          223


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      ..| .+|...+.....+. ..|+++++|.||.+.+.+..........+.          ......+..++.+.++..++.
T Consensus       386 ~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~----------~~g~~~l~pe~~~~~l~~~l~  454 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPEVHDRLV----------RQGVLAMEPEHALGALDQMLE  454 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC------CHHHH----------HTTEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChHHHHHHH----------hcCCCCCCHHHHHHHHHHHHc
Confidence            467 77776666665444 359999999999988765321111111111          011335788999999999998


Q ss_pred             CCC
Q 020254          244 NPS  246 (328)
Q Consensus       244 ~~~  246 (328)
                      .+.
T Consensus       455 ~~~  457 (496)
T 3mje_A          455 NDD  457 (496)
T ss_dssp             HTC
T ss_pred             CCC
Confidence            754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.63  E-value=6.8e-15  Score=126.52  Aligned_cols=219  Identities=15%  Similarity=0.053  Sum_probs=136.5

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCC-----------Ccc---cccCCCCC--cccc-----------
Q 020254           22 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKA---ELIFPGKK--TRFF-----------   72 (328)
Q Consensus        22 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~---~~~~~~~~--~~~~-----------   72 (328)
                      ..++++||||  +|+||+++++.|+++|++|++++|++           ...   ..+.....  ....           
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            3578999999  89999999999999999999998753           010   01100000  0001           


Q ss_pred             -CceeecC--------ChhhHhhc-------CCCcEEEECCCCCC-----CCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           73 -PGVMIAE--------EPQWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        73 -~~~d~~~--------~~~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                       ..+|+.|        .+++++++       .++|++||+||...     ......+.+...+++|+.++..+++++...
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence             1234443        44555544       37899999999642     123456778899999999999999998763


Q ss_pred             CCCCCcEEEEecccceeecCCCcccccCCCCCC-Cch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCCcch-
Q 020254          132 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGAL-  204 (328)
Q Consensus       132 ~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~-  204 (328)
                      -....++|++||...  +...         +.. ..| .+|...+.....++.+    .|+++.+++||.|..+..... 
T Consensus       168 m~~~g~Iv~isS~~~--~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~  236 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAA--ERVV---------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG  236 (315)
T ss_dssp             EEEEEEEEEEEEGGG--TSCC---------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred             HhcCCEEEEEecccc--cccC---------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence            111268999999765  3211         122 357 7777666665544332    589999999999876421000 


Q ss_pred             ----hhhHHHH-H-HHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          205 ----AKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       205 ----~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                          ..+.... . .....|++      .+..++|+|++++.++....  ..| ++.+.+|.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~p~~------r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          237 KSGEKSFIDYAIDYSYNNAPLR------RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             CSSSSCHHHHHHHHHHHHSSSC------CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             ccccchhHHHHHHHHhccCCCC------CCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence                0011111 0 01112222      25689999999999987432  344 77777764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.60  E-value=1.5e-14  Score=132.03  Aligned_cols=221  Identities=13%  Similarity=0.041  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEE-ecCCCc-------------cccc----CCCCCccccCceeecCChh
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVL-TRSRSK-------------AELI----FPGKKTRFFPGVMIAEEPQ   82 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~~----~~~~~~~~~~~~d~~~~~~   82 (328)
                      ..+++|||||+|.||.+++++|+++|++ |+++ +|+...             ..+.    ........+..+|+.|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4578999999999999999999999987 6666 787533             1111    0111112245689999998


Q ss_pred             hHhhcC------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCC--CC-CCcEEEEecccceeec
Q 020254           83 WRDCIQ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYG  150 (328)
Q Consensus        83 ~~~~~~------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~-~~~~v~~Ss~~v~~yg  150 (328)
                      +.++++      .+|+|||+||....   .....+..+.+++.|+.++.++.+++....  .+ ..+||++||.+.. +|
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~-~g  408 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI-WG  408 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT-TC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc-CC
Confidence            888775      47999999997543   244567788999999999999999998731  11 6789999997651 33


Q ss_pred             CCCcccccCCCCCCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccc
Q 020254          151 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       151 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (328)
                      .          +....| .+|...+.....+. ..|+++++|.||.+ +.+..........+. ..         ....+
T Consensus       409 ~----------~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~-~~---------g~~~l  466 (525)
T 3qp9_A          409 G----------AGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW-EGSRVTEGATGERLR-RL---------GLRPL  466 (525)
T ss_dssp             C----------TTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB-TTSGGGSSHHHHHHH-HT---------TBCCB
T ss_pred             C----------CCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc-ccccccchhhHHHHH-hc---------CCCCC
Confidence            2          223457 67776666644333 35999999999999 322110011111111 11         12358


Q ss_pred             cHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHH
Q 020254          230 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGN  270 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~  270 (328)
                      ..+++++++..++..+.  ....+.   .+.|..+...+..
T Consensus       467 ~pee~a~~l~~~l~~~~--~~v~v~---~~dw~~~~~~~~~  502 (525)
T 3qp9_A          467 APATALTALDTALGHGD--TAVTIA---DVDWSSFAPGFTT  502 (525)
T ss_dssp             CHHHHHHHHHHHHHHTC--SEEEEC---CBCHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHhCCC--CeEEEE---eCCHHHHHhhccc
Confidence            89999999999998754  222232   2556666655543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.59  E-value=7.3e-15  Score=126.56  Aligned_cols=224  Identities=14%  Similarity=0.001  Sum_probs=122.1

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCC-----------Cccccc-----------CCCCCc-------c
Q 020254           22 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELI-----------FPGKKT-------R   70 (328)
Q Consensus        22 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~-----------~~~~~~-------~   70 (328)
                      ..++++||||  +|+||+++++.|+++|++|++++|++           .+....           ......       .
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            3468999999  89999999999999999999998642           111100           000000       0


Q ss_pred             cc------------CceeecC--------ChhhHhhc-------CCCcEEEECCCCCC-----CCCCChhHHHHHHHhhh
Q 020254           71 FF------------PGVMIAE--------EPQWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRI  118 (328)
Q Consensus        71 ~~------------~~~d~~~--------~~~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~  118 (328)
                      ..            ..+|+.|        .+++++++       .++|++||+||...     ......+.++..+++|+
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            01            1223333        34555444       37899999998642     13345677889999999


Q ss_pred             hhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC-Cch-HHHHHHHHHHHHhccc----CCCeEEEEE
Q 020254          119 RVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIR  192 (328)
Q Consensus       119 ~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilR  192 (328)
                      .++..+++++...-....++|++||...  +...         +.. ..| .+|.........++.+    .|+++++|+
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~  236 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIAS--EKVI---------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCIS  236 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEecccc--cccc---------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEe
Confidence            9999999998873111268999999765  3211         111 245 5555444444333322    489999999


Q ss_pred             eceEEcCCCcchhh-hHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          193 IGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       193 p~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ||.|..+....... ....+ .... ..+........+..++|+|++++.++....  ..| ++.+.+|.
T Consensus       237 PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          237 AGPLKSRAASAIGKAGDKTFIDLAI-DYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             ECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             eCCccChhhhhcccccchhhHHHHH-HHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            99998763211100 00000 0000 000000011235789999999999987532  344 88887775

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.58  E-value=7.2e-15  Score=136.98  Aligned_cols=204  Identities=13%  Similarity=0.065  Sum_probs=130.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC---------CCcccccC----CCCCccccCceeecCChhhHhhc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS---------RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI   87 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~   87 (328)
                      ...++++||||+|.||+++++.|+++|++|++++|.         ........    ....   ...+|+.|.+++++++
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EAVADYNSVIDGAKVI   93 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC---CEEECCCCGGGHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC---eEEEEeCCHHHHHHHH
Confidence            446789999999999999999999999999999882         22221111    1111   1236888887777666


Q ss_pred             C-------CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcc
Q 020254           88 Q-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETE  155 (328)
Q Consensus        88 ~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~  155 (328)
                      +       ++|++||+||.....   ....+.++..+++|+.++..+++++...  +.+..++|++||.+.. ++.    
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~-~~~----  168 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI-YGN----  168 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH-HCC----
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc-CCC----
Confidence            4       689999999975432   4456788999999999999998888431  1456789999997641 432    


Q ss_pred             cccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccH
Q 020254          156 VFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       156 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  231 (328)
                            +....| .+|.........++.+   .|+.+.++.||.+-....    ...             .......+.+
T Consensus       169 ------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----~~~-------------~~~~~~~~~p  225 (613)
T 3oml_A          169 ------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----GIL-------------PDILFNELKP  225 (613)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C----CCC-------------CHHHHTTCCG
T ss_pred             ------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh----hcc-------------chhhhhcCCH
Confidence                  223457 7777666665554433   489999999986411110    000             0111234578


Q ss_pred             HHHHHHHHHHhhCCC--CCceEEecC
Q 020254          232 DDIVNLIYEALSNPS--YRGVINGTA  255 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g~~~i~~  255 (328)
                      +|+|.+++.++....  .+.++++.+
T Consensus       226 edvA~~v~~L~s~~~~~tG~~i~vdG  251 (613)
T 3oml_A          226 KLIAPVVAYLCHESCEDNGSYIESAA  251 (613)
T ss_dssp             GGTHHHHHHTTSTTCCCCSCEEEEET
T ss_pred             HHHHHHHHHhcCCCcCCCceEEEECC
Confidence            999999999887643  233666644

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.56  E-value=5.1e-14  Score=121.74  Aligned_cols=166  Identities=10%  Similarity=0.022  Sum_probs=109.7

Q ss_pred             CCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCC---------C----cccccCCCCCc---cccCceeecCC--h-
Q 020254           23 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSR---------S----KAELIFPGKKT---RFFPGVMIAEE--P-   81 (328)
Q Consensus        23 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~----~~~~~~~~~~~---~~~~~~d~~~~--~-   81 (328)
                      .++++||||++  .||.+++++|+++|++|++.+|++         .    ...........   .....+|+.+.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            46899999875  999999999999999999777654         1    11111110000   01222344443  3 


Q ss_pred             -----------------hhHhhc-------CCCcEEEECCCCCC--C---CCCChhHHHHHHHhhhhhHHHHHHHHhcCC
Q 020254           82 -----------------QWRDCI-------QGSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINESP  132 (328)
Q Consensus        82 -----------------~~~~~~-------~~~d~vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  132 (328)
                                       ++.+++       .++|++||+||...  .   .....+.+...+++|+.++..+.+++....
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             666554       36899999999631  1   235567789999999999999999987631


Q ss_pred             CCCCcEEEEecccceeecCCCcccccCCCCCC-Cch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcC
Q 020254          133 EGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGK  199 (328)
Q Consensus       133 ~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~  199 (328)
                      ....++|++||...  +..         .+.. ..| .+|.........++.+    .++.+.++.||.|..+
T Consensus       162 ~~~g~Iv~isS~~~--~~~---------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          162 KPQSSIISLTYHAS--QKV---------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hhCCeEEEEeCccc--cCC---------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            11258999999765  221         1222 267 7776666655444332    4899999999998764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.41  E-value=4.3e-12  Score=117.87  Aligned_cols=207  Identities=11%  Similarity=0.081  Sum_probs=129.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceee-cCChhh-Hh---hcCCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMI-AEEPQW-RD---CIQGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~-~~~~~~-~~---~~~~~d~vi   94 (328)
                      +.+.++||||++.||+++++.|+++|++|++.+|.....  .++...........+|+ .+.+.+ ++   .+.++|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            346899999999999999999999999999988743211  11111111111223566 433322 22   234799999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||+...   .....+.++..+++|+.++..+.+++...  +.+..++|++||... .++.          +....| .
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag-~~~~----------~~~~~Y~a  469 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG-IYGN----------FGQANYSS  469 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH-HSCC----------TTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh-ccCC----------CCChhHHH
Confidence            99997543   24556788999999999998888776542  134568999999764 1331          122457 6


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      +|.........++.+   .|+++.+|.||. -.+   .......       ..      .......+|+|.+++.++...
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~---m~~~~~~-------~~------~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA---MTLSIMR-------EQ------DKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC---C----------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc---cccccCc-------hh------hccCCCHHHHHHHHHHHhCCc
Confidence            776666555444433   489999999983 211   1111000       00      112457899999999887653


Q ss_pred             C-CCc-eEEecCC
Q 020254          246 S-YRG-VINGTAP  256 (328)
Q Consensus       246 ~-~~g-~~~i~~~  256 (328)
                      . ..| ++.+.+|
T Consensus       533 ~~itG~~~~vdGG  545 (604)
T 2et6_A          533 VPVTGETFEIGGG  545 (604)
T ss_dssp             CCCCSCEEEEETT
T ss_pred             cCCCCcEEEECCC
Confidence            3 234 7777665

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.36  E-value=1.2e-11  Score=114.96  Aligned_cols=221  Identities=13%  Similarity=0.082  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC---------CcccccC----CCCCccccCceeecCChhhHhhc-
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-   87 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-   87 (328)
                      ..+.++||||++.||+++++.|+++|++|++.+|+.         .......    ....   ....|+.|.+++++++ 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~---~~~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---VAVADYNNVLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC---EEEEECCCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC---eEEEEcCCHHHHHHHHH
Confidence            357899999999999999999999999999998765         2211111    1110   1125666665444333 


Q ss_pred             ------CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc
Q 020254           88 ------QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  156 (328)
Q Consensus        88 ------~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~  156 (328)
                            .++|++||+||+...   .....+.++..+++|+.++..+.+++...  +.+..++|++||... .++.     
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag-~~~~-----  157 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG-LYGN-----  157 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH-HHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH-cCCC-----
Confidence                  479999999997533   34566788999999999998887776542  134468999999764 1332     


Q ss_pred             ccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHH
Q 020254          157 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       157 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  232 (328)
                           +....| .+|.........++.+   +|+++.+|.|+ +   .........+             .........+
T Consensus       158 -----~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~---~T~m~~~~~~-------------~~~~~~~~pe  215 (604)
T 2et6_A          158 -----FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A---RSRMTESIMP-------------PPMLEKLGPE  215 (604)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C---CCHHHHTTSC-------------HHHHTTCSHH
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C---cCccccccCC-------------hhhhccCCHH
Confidence                 122457 7776666655544433   48999999996 2   1111000000             0011235789


Q ss_pred             HHHHHHHHHhhCCC--CCceEEecCC------------------CccCHHHHHHHHHHHhC
Q 020254          233 DIVNLIYEALSNPS--YRGVINGTAP------------------NPVRLAEMCDHLGNVLG  273 (328)
Q Consensus       233 D~a~~~~~~~~~~~--~~g~~~i~~~------------------~~~~~~e~~~~i~~~~g  273 (328)
                      |++.+++.++....  .+.++.+.+|                  ...+..++.+.+.+...
T Consensus       216 ~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          216 KVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            99999999987543  2336666544                  23566777777766543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.33  E-value=2.4e-11  Score=122.60  Aligned_cols=202  Identities=15%  Similarity=0.068  Sum_probs=130.1

Q ss_pred             CCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEe-cCCCccccc--------CCCCCccccCceeecCChhhHhhcC---
Q 020254           22 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLT-RSRSKAELI--------FPGKKTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        22 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      +.+++|||||+|. ||.++++.|++.|++|++++ |+.......        ........+..+|+.|.++++++++   
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            3568999999998 99999999999999999984 554432111        0111112245679999888776552   


Q ss_pred             ----------CCcEEEECCCCCCCC----CCC--hhHHHHHHHhhhhhHHHHHHHHhcC---C-CCCCcEEEEeccccee
Q 020254           89 ----------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLINES---P-EGVRPSVLVSATALGY  148 (328)
Q Consensus        89 ----------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~~~~~~---~-~~~~~~v~~Ss~~v~~  148 (328)
                                ++|++||+||.....    ...  .+.+...+++|+.++..++.+++..   . .+..+||++||.... 
T Consensus       754 ~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~-  832 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT-  832 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC-
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc-
Confidence                      589999999975332    223  5667899999999999999887431   1 123589999997641 


Q ss_pred             ecCCCcccccCCCCCCCch-HHHHHHHHH-HHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCc
Q 020254          149 YGTSETEVFDESSPSGNDY-LAEVCREWE-GTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ  224 (328)
Q Consensus       149 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~-~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (328)
                      ++            ....| .+|...... ...+....  .+.++++.||++.+.+..........  .....++     
T Consensus       833 ~g------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~--~~~~~pl-----  893 (1887)
T 2uv8_A          833 FG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE--GIEKMGV-----  893 (1887)
T ss_dssp             SS------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH--HHHTTSC-----
T ss_pred             cC------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH--HHHhcCC-----
Confidence            22            12357 777766665 33333322  38999999999985321000011111  1111111     


Q ss_pred             ccccccHHHHHHHHHHHhhCC
Q 020254          225 WFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       225 ~~~~i~v~D~a~~~~~~~~~~  245 (328)
                        .+..++|+|.+++.++...
T Consensus       894 --r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          894 --RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             --CCEEHHHHHHHHHGGGSHH
T ss_pred             --CCCCHHHHHHHHHHHhCCC
Confidence              2458999999999988754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.28  E-value=3.1e-11  Score=104.59  Aligned_cols=234  Identities=9%  Similarity=-0.069  Sum_probs=138.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCcccc----------------cCCCCCccccCceeecCChhh
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQW   83 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~~~~~~   83 (328)
                      ...+++|||||++.||.++++.|++ .|.+|++++|+......                ............+|+.|.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4568999999999999999999999 99999999987654321                111111112345799998877


Q ss_pred             HhhcC-------CCcEEEECCCCC-------------CC------------------------CCCChhHHHHHHHhhhh
Q 020254           84 RDCIQ-------GSTAVVNLAGTP-------------IG------------------------TRWSSEIKKEIKESRIR  119 (328)
Q Consensus        84 ~~~~~-------~~d~vi~~a~~~-------------~~------------------------~~~~~~~~~~~~~~n~~  119 (328)
                      +++++       ++|++||+||..             ..                        .+...+.+...+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            66653       689999999873             11                        22456778888889988


Q ss_pred             hHH-HHHHHHhc--CCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHHHHhccc---C-CCeEE
Q 020254          120 VTS-KVVDLINE--SPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVN---K-DVRLA  189 (328)
Q Consensus       120 ~~~-~l~~~~~~--~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~~---~-~~~~~  189 (328)
                      +.. .++.++..  ......++|.+||.+.. .+          .|..  ..| .+|.........++.+   . |+++.
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~-~~----------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVN  273 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEK-IT----------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDAR  273 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCG-GG----------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEE
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhh-Cc----------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEE
Confidence            765 44554432  11123579999987641 11          1222  467 7776666655544443   5 89999


Q ss_pred             EEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCC--ccCHHHHHHH
Q 020254          190 LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPN--PVRLAEMCDH  267 (328)
Q Consensus       190 ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~--~~~~~e~~~~  267 (328)
                      ++.||.+-.+....... .+........++      ..+-..+|++.++..++...-.+..-.+.++.  .+.-+|+-+.
T Consensus       274 aVaPG~i~T~~s~~ip~-~p~y~~~l~~~m------kr~G~~Ed~a~~i~~L~sd~l~~~~~~~D~~~~~r~d~~e~~~~  346 (405)
T 3zu3_A          274 VSVLKAVVSQASSAIPM-MPLYLSLLFKVM------KEKGTHEGCIEQVYSLYKDSLCGDSPHMDQEGRLRADYKELDPE  346 (405)
T ss_dssp             EEECCCCCCHHHHTSTT-HHHHHHHHHHHH------HHHTCCCCHHHHHHHHHHHTTSSSCCCBCTTSCEECCHHHHCHH
T ss_pred             EEEeCCCcCchhhcCCC-CcHHHHHHHHHH------hcCCCcHHHHHHHHHHHhccccCCCCCcCCCcCCCCchhhcCHH
Confidence            99999987653211100 111100000011      01223367888888888753322222233322  2344556555


Q ss_pred             HHHHh
Q 020254          268 LGNVL  272 (328)
Q Consensus       268 i~~~~  272 (328)
                      +.+..
T Consensus       347 ~q~~~  351 (405)
T 3zu3_A          347 VQNQV  351 (405)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55433

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.26  E-value=2.4e-11  Score=116.20  Aligned_cols=201  Identities=16%  Similarity=0.134  Sum_probs=136.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHH-hCCC-eEEEEecCCCccc---cc----CCCCCccccCceeecCChhhHhhcC---
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQ-ADNH-QVRVLTRSRSKAE---LI----FPGKKTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~---~~----~~~~~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      .+.++++||||+|.||.+++++|. ++|. +|++++|+.....   +.    ...+.......+|+.|.++++++++   
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            345789999999999999999999 7898 6999999843322   11    1112222245689999998887774   


Q ss_pred             ---CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 ---GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ---~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                         .+|+|||+||....   .+...+.++..++.|+.++.++.+++..   .. +||++||.+. ..|.          +
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag-~~g~----------~  672 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSG-VLGS----------G  672 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHH-HHTC----------S
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHh-cCCC----------C
Confidence               47999999997544   2345678899999999999999999854   33 8999999764 1442          2


Q ss_pred             CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      ....| .+|...+.....+.. .|++++.+-||.+-..+.  ...+.... .....       .....+..++....+..
T Consensus       673 g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~--~~~~~~~~~~~~~~-------~g~~~l~~~e~~~~~~~  742 (795)
T 3slk_A          673 GQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGM--ASTLREAEQDRLAR-------SGLLPISTEEGLSQFDA  742 (795)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCH--HHHHHHHHHHHHHH-------TTBCCCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchh--hccccHHHHHHHHh-------cCCCCCCHHHHHHHHHH
Confidence            23457 667655555554443 599999999998875531  11111111 11111       11235778888888888


Q ss_pred             HhhCCC
Q 020254          241 ALSNPS  246 (328)
Q Consensus       241 ~~~~~~  246 (328)
                      ++..+.
T Consensus       743 ~l~~~~  748 (795)
T 3slk_A          743 ACGGAH  748 (795)
T ss_dssp             HHTSSC
T ss_pred             HHhCCC
Confidence            887754

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.26  E-value=1.1e-10  Score=117.60  Aligned_cols=224  Identities=12%  Similarity=0.021  Sum_probs=137.9

Q ss_pred             CCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEecC-CCcccc----c----CCCCCccccCceeecCChhhHhhcC---
Q 020254           22 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLTRS-RSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        22 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----~----~~~~~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      ..+++|||||+|. ||.+++++|++.|++|++++++ ......    +    ........+..+|+.|.++++++++   
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3468999999999 9999999999999999998644 332211    1    1111112244679999888876652   


Q ss_pred             --------CCcEEEECCCCCCCC----CCC--hhHHHHHHHhhhhhHHHHHHHHh--c-CC-CCCCcEEEEecccceeec
Q 020254           89 --------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLIN--E-SP-EGVRPSVLVSATALGYYG  150 (328)
Q Consensus        89 --------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~~~~--~-~~-~~~~~~v~~Ss~~v~~yg  150 (328)
                              ++|+|||+||.....    ...  .+.+..++++|+.++..++.+++  . .. .+..+||++||... .++
T Consensus       731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag-~~g  809 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG-TFG  809 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS-SSS
T ss_pred             HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh-ccC
Confidence                    589999999975332    233  46778999999999988877632  2 11 22357999999754 122


Q ss_pred             CCCcccccCCCCCCCch-HHHHHHHHHHHHhc-c--cCCCeEEEEEeceEE-cCCCcchhhhHHHHHHHcCCCCCCCCcc
Q 020254          151 TSETEVFDESSPSGNDY-LAEVCREWEGTALK-V--NKDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGPLGSGQQW  225 (328)
Q Consensus       151 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~-~--~~~~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (328)
                                  ....| .+|.........+. .  ..+++++++.||.+- .+-.... ....  ......++      
T Consensus       810 ------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-~~~~--~~~~~~pl------  868 (1878)
T 2uv9_A          810 ------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-NLVA--EGVEKLGV------  868 (1878)
T ss_dssp             ------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-HHTH--HHHHTTTC------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-hhhH--HHHHhcCC------
Confidence                        12457 77776666533221 1  123899999999987 4321110 1111  11111111      


Q ss_pred             cccccHHHHHHHHHHHhhCCC----CCceEEe--cCCC--ccCHHHHHHHH
Q 020254          226 FSWIHLDDIVNLIYEALSNPS----YRGVING--TAPN--PVRLAEMCDHL  268 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~~~----~~g~~~i--~~~~--~~~~~e~~~~i  268 (328)
                       ....++|+|.+++.++....    .+..+.+  .+|.  ...+.++...+
T Consensus       869 -r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          869 -RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             -CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence             23589999999998876432    2335555  3443  23455555443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.22  E-value=1.1e-11  Score=90.20  Aligned_cols=93  Identities=18%  Similarity=0.170  Sum_probs=71.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ++|+|+|+|+ |++|+.+++.|++.| ++|++++|++.+.........  .....|+.+.+.+.+.++++|+|||+++..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGV--ATKQVDAKDEAGLAKALGGFDAVISAAPFF   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTC--EEEECCTTCHHHHHHHTTTCSEEEECSCGG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCC--cEEEecCCCHHHHHHHHcCCCEEEECCCch
Confidence            4579999999 999999999999999 999999998766554432111  133467778888999999999999998531


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcE
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS  138 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  138 (328)
                                         ....+++++.+  .+++.+
T Consensus        81 -------------------~~~~~~~~~~~--~g~~~~   97 (118)
T 3ic5_A           81 -------------------LTPIIAKAAKA--AGAHYF   97 (118)
T ss_dssp             -------------------GHHHHHHHHHH--TTCEEE
T ss_pred             -------------------hhHHHHHHHHH--hCCCEE
Confidence                               13577888888  566544

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.20  E-value=5.5e-11  Score=103.98  Aligned_cols=171  Identities=11%  Similarity=-0.107  Sum_probs=111.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCccccc----------------CCCCCccccCceeecCChhhH
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELI----------------FPGKKTRFFPGVMIAEEPQWR   84 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------------~~~~~~~~~~~~d~~~~~~~~   84 (328)
                      ..+++|||||++.||.++++.|++ .|++|++++|+.......                ...+.......+|+.|.++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            467899999999999999999999 999999999986543321                111111123457999887665


Q ss_pred             hhc--------CCCcEEEECCCCC-------------CCC------------------------CCChhHHHHHHHhhhh
Q 020254           85 DCI--------QGSTAVVNLAGTP-------------IGT------------------------RWSSEIKKEIKESRIR  119 (328)
Q Consensus        85 ~~~--------~~~d~vi~~a~~~-------------~~~------------------------~~~~~~~~~~~~~n~~  119 (328)
                      +++        .++|++||+||..             ...                        +...+.+...+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            443        4689999999862             111                        2356677778888877


Q ss_pred             hHH-HHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEE
Q 020254          120 VTS-KVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIR  192 (328)
Q Consensus       120 ~~~-~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilR  192 (328)
                      +.. .++.++...  .....++|.+||.+.  .-.   .+.    .....| .+|.........++.+   .|+++.++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g--~~~---~p~----~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVa  290 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGT--EIT---WPI----YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAV  290 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCC--GGG---HHH----HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchh--hcc---CCC----ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEE
Confidence            654 555554431  112357999998754  110   000    001356 6676666655544433   489999999


Q ss_pred             eceEEcCCC
Q 020254          193 IGIVLGKDG  201 (328)
Q Consensus       193 p~~v~g~~~  201 (328)
                      ||.|-.+..
T Consensus       291 PG~i~T~~~  299 (422)
T 3s8m_A          291 LKSVVTQAS  299 (422)
T ss_dssp             ECCCCCTTG
T ss_pred             cCCCcChhh
Confidence            999988753

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.20  E-value=8.8e-12  Score=122.11  Aligned_cols=202  Identities=15%  Similarity=0.092  Sum_probs=129.1

Q ss_pred             CCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEE-ecCCCccccc----CCC----CCccccCceeecCChhhHhhcC---
Q 020254           22 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPG----KKTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        22 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~----~~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      +.+++|||||+|. ||.++++.|++.|++|+++ .|+.......    ...    ........+|+.|.++++++++   
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~  554 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  554 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence            3468999999998 9999999999999999998 4554433221    111    1112244679999988876652   


Q ss_pred             ----------CCcEEEECCCCCCCC----CCC--hhHHHHHHHhhhhhHHHHHHHHh--cC-C-CCCCcEEEEeccccee
Q 020254           89 ----------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLIN--ES-P-EGVRPSVLVSATALGY  148 (328)
Q Consensus        89 ----------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~~~~--~~-~-~~~~~~v~~Ss~~v~~  148 (328)
                                ++|+|||+||.....    ...  .+.+...+++|+.++..++++++  .. . .+..+||++||.... 
T Consensus       555 e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~-  633 (1688)
T 2pff_A          555 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT-  633 (1688)
T ss_dssp             SCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT-
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc-
Confidence                      589999999975332    223  56778899999999999988873  21 1 222578999986541 


Q ss_pred             ecCCCcccccCCCCCCCch-HHHHHHHHH-HHHhcccC--CCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCc
Q 020254          149 YGTSETEVFDESSPSGNDY-LAEVCREWE-GTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ  224 (328)
Q Consensus       149 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~-~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (328)
                      ++            ....| .+|...... ...+....  .++++++.||.+.+.+........       ...+  ...
T Consensus       634 ~G------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~-------~~~l--~~i  692 (1688)
T 2pff_A          634 FG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII-------AEGI--EKM  692 (1688)
T ss_dssp             SS------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC-------STTT--SSS
T ss_pred             cC------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH-------HHHH--HhC
Confidence            22            12457 777777666 33333322  388889999998853210000000       0000  001


Q ss_pred             ccccccHHHHHHHHHHHhhCC
Q 020254          225 WFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       225 ~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ......++|+|.+++.++...
T Consensus       693 plR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          693 GVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             SCCCCCCCTTHHHHHHHTSTT
T ss_pred             CCCCCCHHHHHHHHHHHhCCC
Confidence            112347899999999998765

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.17  E-value=2.7e-10  Score=100.40  Aligned_cols=168  Identities=9%  Similarity=-0.105  Sum_probs=109.7

Q ss_pred             cCCCeEEEEcCCchhHHH--HHHHHHhCCCeEEEEecCCCcccc------------c----CCCCCccccCceeecCChh
Q 020254           21 ASQMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKAEL------------I----FPGKKTRFFPGVMIAEEPQ   82 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~------------~----~~~~~~~~~~~~d~~~~~~   82 (328)
                      ...+++|||||++.||.+  +++.|.+.|++|++++|+......            .    ...........+|+.|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            446799999999999999  999999999999999997654211            0    0111111234579999887


Q ss_pred             hHhhcC-------CCcEEEECCCCC-------------CCC------------------------CCChhHHHHHHHhhh
Q 020254           83 WRDCIQ-------GSTAVVNLAGTP-------------IGT------------------------RWSSEIKKEIKESRI  118 (328)
Q Consensus        83 ~~~~~~-------~~d~vi~~a~~~-------------~~~------------------------~~~~~~~~~~~~~n~  118 (328)
                      ++++++       ++|++||+||..             ...                        ....+.+...+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            776553       689999999873             111                        225566677777777


Q ss_pred             hhHH-HHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHHHHHHHHHHHhccc----CCCeE
Q 020254          119 RVTS-KVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVN----KDVRL  188 (328)
Q Consensus       119 ~~~~-~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~~----~~~~~  188 (328)
                      .+.. .++.++...  .....++|.+||.+.  .-         ..|..  ..| .+|...+.....++.+    .|+++
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~--~~---------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrV  286 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGS--PR---------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRA  286 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCC--GG---------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEE
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchh--cC---------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEE
Confidence            6554 445554431  112357888888653  11         12223  566 6776666555444433    47999


Q ss_pred             EEEEeceEEcC
Q 020254          189 ALIRIGIVLGK  199 (328)
Q Consensus       189 ~ilRp~~v~g~  199 (328)
                      .++.||.|-.+
T Consensus       287 N~V~PG~v~T~  297 (418)
T 4eue_A          287 FVSVNKALVTK  297 (418)
T ss_dssp             EEEECCCCCCH
T ss_pred             EEEECCcCcCh
Confidence            99999998875

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.16  E-value=5.5e-11  Score=102.04  Aligned_cols=117  Identities=15%  Similarity=0.157  Sum_probs=83.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCccc--ccCCCCCccccCcee-ecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE--LIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ++|||+|+||+|++|+.++..|+++|  ++|+++++++....  .+.....   ...+. +.+.+++.++++++|+|||+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~---~~~v~~~~~t~d~~~al~gaDvVi~~   83 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT---GAVVRGFLGQQQLEAALTGMDLIIVP   83 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS---SCEEEEEESHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc---cceEEEEeCCCCHHHHcCCCCEEEEc
Confidence            45799999999999999999999988  89999998765111  0111100   00111 12345778889999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      |+.+....   ....+....|+..++++++++.+  .+.+.+++++|--+
T Consensus        84 ag~~~~~g---~~r~dl~~~N~~~~~~i~~~i~~--~~p~~~viv~SNPv  128 (326)
T 1smk_A           84 AGVPRKPG---MTRDDLFKINAGIVKTLCEGIAK--CCPRAIVNLISNPV  128 (326)
T ss_dssp             CCCCCCSS---CCCSHHHHHHHHHHHHHHHHHHH--HCTTSEEEECCSSH
T ss_pred             CCcCCCCC---CCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEECCch
Confidence            99753221   12346688999999999999999  56778888887443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.11  E-value=1.5e-10  Score=99.57  Aligned_cols=114  Identities=16%  Similarity=0.169  Sum_probs=82.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecC----CCcccc----cCCCCCccccCceeecCChhhHhh
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRS----RSKAEL----IFPGKKTRFFPGVMIAEEPQWRDC   86 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~   86 (328)
                      ++|||+|+||+|++|++++..|+..|+       +|++++++    ..+...    +.....  .+ ..++...+++.++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~~-~~~i~~~~~~~~a   80 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--PL-LAGMTAHADPMTA   80 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--TT-EEEEEEESSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--cc-cCcEEEecCcHHH
Confidence            457999999999999999999998885       79998887    321211    111100  02 1366666778899


Q ss_pred             cCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCC-CC-cEEEEec
Q 020254           87 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VR-PSVLVSA  143 (328)
Q Consensus        87 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~-~~v~~Ss  143 (328)
                      ++++|+|||+|+....   ......+....|+..++++++++.+  .. .+ +++++|.
T Consensus        81 l~~aD~Vi~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~--~~~p~a~ii~~SN  134 (329)
T 1b8p_A           81 FKDADVALLVGARPRG---PGMERKDLLEANAQIFTVQGKAIDA--VASRNIKVLVVGN  134 (329)
T ss_dssp             TTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HSCTTCEEEECSS
T ss_pred             hCCCCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hcCCCeEEEEccC
Confidence            9999999999997532   2234567889999999999999998  42 44 6666664

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.10  E-value=2.4e-10  Score=97.53  Aligned_cols=116  Identities=20%  Similarity=0.253  Sum_probs=82.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEec--CCCcccc----cCCCCCccccCceeecCCh-hhHhhcCCCcEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAEL----IFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVV   94 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~vi   94 (328)
                      |||+|+||+|++|++++..|+..|+  ++.++++  +..+...    +..... .....+++.+.+ ++.++++++|+||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~d~l~~al~gaD~Vi   79 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDENLRIIDESDVVI   79 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH-hcCCCeEEEeCCcchHHHhCCCCEEE
Confidence            5899999999999999999998874  6888887  4321110    000000 001234665533 4788899999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccc
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  146 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v  146 (328)
                      |+|+.+..   ......+....|+..++++++++++  .+ +++++++|--+
T Consensus        80 ~~Ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~--~~-~~~vlv~SNPv  125 (313)
T 1hye_A           80 ITSGVPRK---EGMSRMDLAKTNAKIVGKYAKKIAE--IC-DTKIFVITNPV  125 (313)
T ss_dssp             ECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HC-CCEEEECSSSH
T ss_pred             ECCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecCcH
Confidence            99997522   1234567889999999999999999  56 78888887433

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.04  E-value=3.7e-10  Score=95.90  Aligned_cols=115  Identities=15%  Similarity=0.174  Sum_probs=78.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEec--CCCcccccCCCCCcc--ccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAELIFPGKKTR--FFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||+|+||+|++|++++..|+..|+  ++.++++  .+.+...........  ....+.+.. ++ .++++++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~~-~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-GG-YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-CC-GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-CC-HHHhCCCCEEEEcC
Confidence            6899999999999999999998875  6888887  432211100000000  001122222 22 56789999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                      +.+...   .....+....|+..++++++++.+  .+.+.+++++|--
T Consensus        79 g~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~--~~p~~~viv~SNP  121 (303)
T 1o6z_A           79 GIPRQP---GQTRIDLAGDNAPIMEDIQSSLDE--HNDDYISLTTSNP  121 (303)
T ss_dssp             CCCCCT---TCCHHHHHHHHHHHHHHHHHHHHT--TCSCCEEEECCSS
T ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEEeCCh
Confidence            975222   223457789999999999999999  6778888888743

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.93  E-value=1.5e-09  Score=115.00  Aligned_cols=166  Identities=16%  Similarity=0.117  Sum_probs=109.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCcccc-------cCCCCCccccCceeecCChhhHhhcC-----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      ..++++||||+|.||.++++.|+++|++ |++++|+..+...       +...........+|+.|.++++++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4578999999999999999999999986 8888888654311       11111112244679999888776653     


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                       .+|+|||+||....   .+...+.+...+++|+.++.++.+++........+||++||... ..|.          +..
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag-~~g~----------~g~ 2031 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSC-GRGN----------AGQ 2031 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHH-HTTC----------TTC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhh-cCCC----------CCc
Confidence             68999999997433   23345667788899999999998877652123368999999764 1331          223


Q ss_pred             Cch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcC
Q 020254          165 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGK  199 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  199 (328)
                      ..| .+|.........+... |++...+-.+.+-+.
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD-GLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcCCc
Confidence            467 7787777777765553 888888888766543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.79  E-value=1.4e-08  Score=76.21  Aligned_cols=75  Identities=19%  Similarity=0.171  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~~   99 (328)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|++++|++...........  .....|..+.+.+.++ +.++|+||++++.
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCS--EEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCC--EEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            3568999997 999999999999999999999998765444332211  1223455666666665 6789999999864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.74  E-value=1.5e-08  Score=90.72  Aligned_cols=106  Identities=14%  Similarity=0.213  Sum_probs=73.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      +++|+|+| +|++|+++++.|++.|++|++++|+..+...+...........+|+.|.+++.++++++|+|||+++....
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~   81 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   81 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence            57899998 89999999999999999999999987665544332111112345787888888889999999999985311


Q ss_pred             CCCChhHHHHHHH--hhh-------hhHHHHHHHHhcCCCCC
Q 020254          103 TRWSSEIKKEIKE--SRI-------RVTSKVVDLINESPEGV  135 (328)
Q Consensus       103 ~~~~~~~~~~~~~--~n~-------~~~~~l~~~~~~~~~~~  135 (328)
                          .......++  .|+       ..+.++++++++  .++
T Consensus        82 ----~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~--aGv  117 (450)
T 1ff9_A           82 ----ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKD--AGI  117 (450)
T ss_dssp             ----HHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHH--TTC
T ss_pred             ----hHHHHHHHhCCCeEEEeecccHHHHHHHHHHHH--CCC
Confidence                111122222  232       256788899888  454

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.72  E-value=1.2e-07  Score=100.82  Aligned_cols=228  Identities=14%  Similarity=0.090  Sum_probs=133.0

Q ss_pred             cCCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEecCCCc-----ccccC----CCCCccccCceeecCChhhHhhc---
Q 020254           21 ASQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLTRSRSK-----AELIF----PGKKTRFFPGVMIAEEPQWRDCI---   87 (328)
Q Consensus        21 ~~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~----~~~~~~~~~~~d~~~~~~~~~~~---   87 (328)
                      ...+.++||||++. ||.++++.|++.|.+|++++|+...     .....    ..........+|+.|.+++++++   
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            35678999999999 9999999999999999999998765     22221    11111123457999988776653   


Q ss_pred             --------CCCcEEEECCCCC----C----CCCCC----hhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-C--cEEEEe
Q 020254           88 --------QGSTAVVNLAGTP----I----GTRWS----SEIKKEIKESRIRVTSKVVDLINES--PEGV-R--PSVLVS  142 (328)
Q Consensus        88 --------~~~d~vi~~a~~~----~----~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~--~~v~~S  142 (328)
                              .++|++|||||..    .    .....    ....+..+++|+.++..++.++...  ..+. .  .++..+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                    2589999999971    0    00111    1223455788998888777766542  0121 1  122222


Q ss_pred             cccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC
Q 020254          143 ATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG  217 (328)
Q Consensus       143 s~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  217 (328)
                      |..   .+.         .+....| .+|.........++.+    .++.++.+.||.+-+.............  ....
T Consensus      2294 ss~---~g~---------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~--~~~~ 2359 (3089)
T 3zen_D         2294 SPN---RGM---------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSA--VEEA 2359 (3089)
T ss_dssp             CSS---TTS---------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHH--HGGG
T ss_pred             Ccc---ccc---------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHH--HHhc
Confidence            211   110         0112357 7777766666555555    2688999999999854321101111111  1111


Q ss_pred             CCCCCCcccccccHHHHHHHHHHHhhCCC---CCc---eEEecCCC---ccCHHHHHHHHH
Q 020254          218 PLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRG---VINGTAPN---PVRLAEMCDHLG  269 (328)
Q Consensus       218 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g---~~~i~~~~---~~~~~e~~~~i~  269 (328)
                      +       ......+|+|.+++.++....   ..+   ...+.+|-   ...+.++...+.
T Consensus      2360 ~-------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2360 G-------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             S-------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             C-------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            1       112378999999999876432   111   33444543   357777777653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.70  E-value=7.6e-09  Score=87.38  Aligned_cols=78  Identities=17%  Similarity=0.185  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +.++++||||+|.+|+++++.|++.|++|++++|+..+...+.....   ......+|+.+.+++.++++++|+|||+++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag  197 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA  197 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCC
Confidence            45799999999999999999999999999999998655433221100   001345788898999999999999999998


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus       198 ~  198 (287)
T 1lu9_A          198 I  198 (287)
T ss_dssp             T
T ss_pred             c
Confidence            5

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.67  E-value=5.7e-08  Score=82.74  Aligned_cols=111  Identities=16%  Similarity=0.240  Sum_probs=76.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCccccc-CCCCCccccCceeecC---ChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAE---EPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~~---~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|+||+|++|+.++..|+..|  ++|.++++++...... +...    ....++..   .++++++++++|+||+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~----~~~~~l~~~~~t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHI----ETRATVKGYLGPEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTS----SSSCEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhcc----CcCceEEEecCCCCHHHHhCCCCEEEECC
Confidence            689999999999999999999888  7999999987211100 1111    11123333   256788899999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +.+....   ....+....|+...+.+++.+.+.  ....++.+.|
T Consensus        77 g~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~s  117 (314)
T 1mld_A           77 GVPRKPG---MTRDDLFNTNATIVATLTAACAQH--CPDAMICIIS  117 (314)
T ss_dssp             SCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHH--CTTSEEEECS
T ss_pred             CcCCCCC---CcHHHHHHHHHHHHHHHHHHHHhh--CCCeEEEEEC
Confidence            9753221   222356789999999999999883  3443444333

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.66  E-value=4.6e-08  Score=73.27  Aligned_cols=74  Identities=23%  Similarity=0.230  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      +|++|+|+|+ |.+|+++++.|.+.|++|+++++++...........  .....|..+++.++++ +.++|+||.+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~--~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGF--DAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCC--cEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            4578999996 999999999999999999999998876544332211  1234577788877765 468999999875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.63  E-value=3.6e-08  Score=86.17  Aligned_cols=74  Identities=18%  Similarity=0.136  Sum_probs=59.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..+|||+|+|| |++|+.+++.|.+ .++|.+.+|+..+.........   ..++|+.|.+++.++++++|+||++++.
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~---~~~~d~~d~~~l~~~~~~~DvVi~~~p~   87 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFAT---PLKVDASNFDKLVEVMKEFELVIGALPG   87 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSE---EEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCC---cEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence            45679999998 9999999999865 5899999998776655544322   3457888999999999999999999864

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.57  E-value=1.7e-07  Score=75.21  Aligned_cols=71  Identities=20%  Similarity=0.295  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhh--
Q 020254           22 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW--   83 (328)
Q Consensus        22 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~--   83 (328)
                      ..|+||||||                ||.+|.++++.|+++|++|++++|+...... .+       .++++.+.++.  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-~~-------~~~~~~~v~s~~e   73 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-PH-------PNLSIREITNTKD   73 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-CC-------TTEEEEECCSHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-CC-------CCeEEEEHhHHHH
Confidence            3579999999                9999999999999999999999997643211 01       12444443332  


Q ss_pred             -----HhhcCCCcEEEECCCCC
Q 020254           84 -----RDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        84 -----~~~~~~~d~vi~~a~~~  100 (328)
                           .+.+.++|++||+||..
T Consensus        74 m~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           74 LLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHHHhcCCCCEEEEcCccc
Confidence                 23345799999999974

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.56  E-value=1.8e-07  Score=69.76  Aligned_cols=74  Identities=14%  Similarity=0.235  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++|++........... ......|..+.+.+.+. +.++|+||++..
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~-~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID-ALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS-SEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcC-cEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            479999996 999999999999999999999998765433321100 00112345555555544 678999999975

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.53  E-value=7e-08  Score=82.59  Aligned_cols=113  Identities=11%  Similarity=0.117  Sum_probs=76.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--e-----EEEEecCCC--ccc----ccCCCCCccccCceeecCChhhHhhcC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--Q-----VRVLTRSRS--KAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQ   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~   88 (328)
                      ++|||+|+||+|+||++++..|+..|.  +     ++++++.+.  ...    .+.....  .+. -++...+...+.++
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~--~~~-~~~~~~~~~~~~~~   78 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL--PLL-KDVIATDKEEIAFK   78 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC--TTE-EEEEEESCHHHHTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh--ccc-CCEEEcCCcHHHhC
Confidence            357999999999999999999998764  4     888888642  111    0100000  011 13333445677889


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCc--EEEEe
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP--SVLVS  142 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~v~~S  142 (328)
                      ++|+||++||.+..   ......+.++.|....+.+++++.+  .+.+.  ++.+|
T Consensus        79 daDvVvitAg~prk---pG~tR~dll~~N~~i~~~i~~~i~~--~~~~~~~vivvs  129 (333)
T 5mdh_A           79 DLDVAILVGSMPRR---DGMERKDLLKANVKIFKCQGAALDK--YAKKSVKVIVVG  129 (333)
T ss_dssp             TCSEEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHHHH--HSCTTCEEEECS
T ss_pred             CCCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEcC
Confidence            99999999986522   2234567788999999999999999  45443  44444

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.52  E-value=7.4e-08  Score=82.61  Aligned_cols=106  Identities=12%  Similarity=0.216  Sum_probs=71.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      +|||.|+|++|++|+.++..|+..|  .+|+++++...+............+...++.-..+..++++++|+||.+||.+
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG~p   87 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGGAP   87 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC--
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccCCC
Confidence            5799999999999999999999888  58999998764322110000000011112222345677889999999999864


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      ..   ......+.+..|....+.+++.+.+.
T Consensus        88 ~k---pG~~R~dLl~~N~~I~~~i~~~i~~~  115 (343)
T 3fi9_A           88 RK---EGMTREDLLKGNAEIAAQLGKDIKSY  115 (343)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            22   23346678889999999999999983

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.51  E-value=1e-06  Score=66.99  Aligned_cols=78  Identities=15%  Similarity=0.206  Sum_probs=55.4

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhh-cCCCcEEEEC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNL   96 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~   96 (328)
                      .....++|+|+|+ |.+|..+++.|.+.|++|++++|++....... ....  .....|..+.+.+.++ +.++|+||.+
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~--~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSG--FTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCS--EEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCC--cEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            3445689999995 99999999999999999999999887665544 2211  0112244455556554 6789999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      .+.
T Consensus        92 ~~~   94 (155)
T 2g1u_A           92 TND   94 (155)
T ss_dssp             SSC
T ss_pred             eCC
Confidence            763

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.40  E-value=7.5e-07  Score=71.33  Aligned_cols=72  Identities=13%  Similarity=0.192  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHh
Q 020254           22 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD   85 (328)
Q Consensus        22 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   85 (328)
                      ..++||||||                ||.+|.++++.|+++|++|++++++....  . +..    ...+|+.+.+++.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~--~-~~g----~~~~dv~~~~~~~~   79 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--T-PPF----VKRVDVMTALEMEA   79 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--C-CTT----EEEEECCSHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc--c-CCC----CeEEccCcHHHHHH
Confidence            4579999999                79999999999999999999998865211  1 111    12345555444433


Q ss_pred             ----hcCCCcEEEECCCCC
Q 020254           86 ----CIQGSTAVVNLAGTP  100 (328)
Q Consensus        86 ----~~~~~d~vi~~a~~~  100 (328)
                          .+.++|++||+||+.
T Consensus        80 ~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           80 AVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHGGGCSEEEECCBCC
T ss_pred             HHHHhcCCCCEEEECCccc
Confidence                335799999999974

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.39  E-value=5.8e-08  Score=85.88  Aligned_cols=76  Identities=20%  Similarity=0.189  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCcccccCCCCC-----ccccCceeecCChhhHhhcCC--CcE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQWRDCIQG--STA   92 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~--~d~   92 (328)
                      ||+|+|+|| |++|+.+++.|++.|   .+|++++|+..+...+.....     ......+|+.|.+++++++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            479999998 999999999999998   399999998776543321100     011335788888999999886  999


Q ss_pred             EEECCCC
Q 020254           93 VVNLAGT   99 (328)
Q Consensus        93 vi~~a~~   99 (328)
                      |||+++.
T Consensus        80 Vin~ag~   86 (405)
T 4ina_A           80 VLNIALP   86 (405)
T ss_dssp             EEECSCG
T ss_pred             EEECCCc
Confidence            9999874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.31  E-value=1.5e-06  Score=73.80  Aligned_cols=114  Identities=13%  Similarity=0.158  Sum_probs=73.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|||.|+|| |.+|..++..|+..|+ +|+++++++.+...........   ......+....+. +.++++|+||.+++
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g   79 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG   79 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence            479999998 9999999999999997 9999998875443211100000   0011222222334 66889999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+...   .....+....|....+.+.+.+.+  .....++.+.|
T Consensus        80 ~p~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~vi~~t  119 (309)
T 1ur5_A           80 APRKP---GMSREDLIKVNADITRACISQAAP--LSPNAVIIMVN  119 (309)
T ss_dssp             C-----------CHHHHHHHHHHHHHHHHHGG--GCTTCEEEECC
T ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEcC
Confidence            74221   122345567888888999999988  44566666655

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.30  E-value=2.1e-07  Score=83.41  Aligned_cols=76  Identities=16%  Similarity=0.265  Sum_probs=58.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++++|+|+|+ |++|+++++.|++. |++|++++|+..+...+..... .....+|+.|.+++.++++++|+|||+++.
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~-~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG-SKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGT-CEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcC-CcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            4578999997 99999999999998 7899999998766544322100 012246777778888888899999999875

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.23  E-value=5.5e-06  Score=70.64  Aligned_cols=113  Identities=16%  Similarity=0.199  Sum_probs=72.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ++|||.|+|+ |.+|..++..|+..|.  +|.++++++.+.....   .... .....+.+.. ++ .++++++|+||.+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~-~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL-PFMGQMSLYA-GD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC-CCTTCEEEC---C-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH-HhcCCeEEEE-CC-HHHhCCCCEEEEc
Confidence            4579999997 9999999999999887  9999999875433211   1110 0012334443 23 4568999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ++.+..   ......+....|+...+.+++.+.+.  ....++.+.|
T Consensus        82 ~g~p~k---~g~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~t  123 (318)
T 1y6j_A           82 AGANRK---PGETRLDLAKKNVMIAKEVTQNIMKY--YNHGVILVVS  123 (318)
T ss_dssp             CCC---------CHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEECS
T ss_pred             CCCCCC---CCcCHHHHHHhhHHHHHHHHHHHHHh--CCCcEEEEec
Confidence            987422   12234567788999999999999883  4455555554

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.23  E-value=3.5e-06  Score=71.81  Aligned_cols=114  Identities=20%  Similarity=0.221  Sum_probs=76.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ..+|||.|+|+ |.+|+.++..|+..|+  +|+++++++.+...    +..... .....+.+... + .+.++++|+||
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~~~v~i~~~-~-~~a~~~aDvVv   78 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAPQPVKTSYG-T-YEDCKDADIVC   78 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSSSCCEEEEE-C-GGGGTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-cccCCeEEEeC-c-HHHhCCCCEEE
Confidence            34679999995 9999999999999886  89999997654322    111000 00012233211 1 35788999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .++|.+..   ......+.+..|....+.+++.+.+  .....++.+-|
T Consensus        79 i~ag~p~k---pG~~R~dL~~~N~~Iv~~i~~~I~~--~~p~a~vlvvt  122 (326)
T 3pqe_A           79 ICAGANQK---PGETRLELVEKNLKIFKGIVSEVMA--SGFDGIFLVAT  122 (326)
T ss_dssp             ECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             EecccCCC---CCccHHHHHHHHHHHHHHHHHHHHH--hcCCeEEEEcC
Confidence            99986422   2234567888999999999999998  34455555544

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.21  E-value=2.4e-06  Score=72.78  Aligned_cols=116  Identities=14%  Similarity=0.157  Sum_probs=74.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccc---cCceeecCChhhHhhcCCCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      +++|||.|+|+ |.+|..++..|+..|+ +|+++++++.+............   .....+.-..+. ++++++|+||.+
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIia   82 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVT   82 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEEC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEc
Confidence            34679999997 9999999999999998 99999998865421110000000   001222211223 678899999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +|.+..   ......+.+..|..-.+.+++.+.+  .....++.+-|
T Consensus        83 ag~p~k---~G~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~iivvt  124 (324)
T 3gvi_A           83 AGVPRK---PGMSRDDLLGINLKVMEQVGAGIKK--YAPEAFVICIT  124 (324)
T ss_dssp             CSCCCC--------CHHHHHHHHHHHHHHHHHHH--HCTTCEEEECC
T ss_pred             cCcCCC---CCCCHHHHHHhhHHHHHHHHHHHHH--HCCCeEEEecC
Confidence            986422   2234456778899999999999988  34444444443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.18  E-value=2.5e-06  Score=64.67  Aligned_cols=73  Identities=11%  Similarity=0.145  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-ccccc---CCCCCccccCceeecCChhhHhh-cCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI---FPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a   97 (328)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++. .....   .....  .....|..+++.++++ ++++|+||.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA--DVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC--EEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC--eEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            358999995 99999999999999999999999752 11111   11110  1334577788888776 78999999997


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      +
T Consensus        80 ~   80 (153)
T 1id1_A           80 D   80 (153)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.17  E-value=6.1e-07  Score=72.03  Aligned_cols=73  Identities=25%  Similarity=0.264  Sum_probs=51.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|+|+||+|.+|+.+++.|++.|++|++++|++.+.......... .....++. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            5899999999999999999999999999999986654332211000 00001232 3456677788999999964

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.16  E-value=4.6e-06  Score=71.78  Aligned_cols=97  Identities=15%  Similarity=0.214  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-----C-eEEEEecCCCccccc---CCCCCccccCceeecCChhhHhhcCCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-----H-QVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      +||||+|.||||++|+.|++.|++++     + +|+++.++.+.....   .+...  ....+++.+.+  .+.+.++|+
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~Dv   83 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLT--PLAHRVVEPTE--AAVLGGHDA   83 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCG--GGTTCBCEECC--HHHHTTCSE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccc--ccceeeeccCC--HHHhcCCCE
Confidence            35799999999999999999999887     4 777776443221111   11100  00122333322  233568999


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                      ||.|++..                   .+..+++.+ +  .+ .++|-+|+..
T Consensus        84 Vf~alg~~-------------------~s~~~~~~~-~--~G-~~vIDlSa~~  113 (352)
T 2nqt_A           84 VFLALPHG-------------------HSAVLAQQL-S--PE-TLIIDCGADF  113 (352)
T ss_dssp             EEECCTTS-------------------CCHHHHHHS-C--TT-SEEEECSSTT
T ss_pred             EEECCCCc-------------------chHHHHHHH-h--CC-CEEEEECCCc
Confidence            99998752                   123666676 6  45 4688888765

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.14  E-value=5e-06  Score=70.73  Aligned_cols=113  Identities=18%  Similarity=0.229  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      .+|||.|+|+ |.+|+.++..|+..|.  +|+++++++.+.....   ..... ....+.+...  -.+.++++|+||.+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~~~~i~~~--~~~a~~~aDiVvi~   83 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FTSPKKIYSA--EYSDAKDADLVVIT   83 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEEC--CGGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh-hcCCcEEEEC--cHHHhcCCCEEEEC
Confidence            4579999996 9999999999998886  8999999765332110   00000 0112233221  24568899999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ||.+   ........+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        84 ag~~---~kpG~tR~dL~~~N~~I~~~i~~~i~~--~~p~a~ilvvt  125 (326)
T 3vku_A           84 AGAP---QKPGETRLDLVNKNLKILKSIVDPIVD--SGFNGIFLVAA  125 (326)
T ss_dssp             CCCC-------------------CHHHHHHHHHT--TTCCSEEEECS
T ss_pred             CCCC---CCCCchHHHHHHHHHHHHHHHHHHHHh--cCCceEEEEcc
Confidence            9864   222344667888999999999999998  44455555544

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.13  E-value=3.2e-06  Score=71.02  Aligned_cols=113  Identities=14%  Similarity=0.130  Sum_probs=76.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.+|..++..|+..|+  +|.++++++........   ..........++.-..+ .++++++|+||.+++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag   78 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAG   78 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCC
Confidence            68999998 9999999999999887  99999998755321000   00000001123331223 678899999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        79 ~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~iivvs  118 (294)
T 1oju_A           79 LARK---PGMTRLDLAHKNAGIIKDIAKKIVE--NAPESKILVVT  118 (294)
T ss_dssp             CCCC---SSCCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEEECS
T ss_pred             CCCC---CCCcHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEeC
Confidence            7522   2234567788999999999999999  44444544444

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.11  E-value=1.9e-06  Score=68.31  Aligned_cols=74  Identities=16%  Similarity=-0.003  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~   96 (328)
                      ..++|+|+||+|.||..+++.+...|++|++++|++.+.......+.   ...+|..+.+..+   +..  .++|+||++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  114 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNS  114 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence            45789999999999999999999999999999998665433322211   1124555544333   222  259999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      ++
T Consensus       115 ~g  116 (198)
T 1pqw_A          115 LA  116 (198)
T ss_dssp             CC
T ss_pred             Cc
Confidence            86

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.09  E-value=8.4e-06  Score=69.00  Aligned_cols=113  Identities=15%  Similarity=0.157  Sum_probs=74.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-C--CeEEEEecCCCcccccCCCCCccccCceeecC--ChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-N--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+||+|.+|+.++..|..+ +  .+++++++.+ .............. ...+..  .+...+.++++|+||.+||
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~-~~~v~~~~~~~~~~~~~~aDivii~ag   78 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPT-AVKIKGFSGEDATPALEGADVVLISAG   78 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCS-SEEEEEECSSCCHHHHTTCSEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCC-CceEEEecCCCcHHHhCCCCEEEEeCC
Confidence            68999999999999999999875 4  5899999876 21111000000001 122221  1234577889999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+.   .......+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        79 ~~r---kpG~~R~dll~~N~~I~~~i~~~i~~--~~p~a~vlvvt  118 (312)
T 3hhp_A           79 VAR---KPGMDRSDLFNVNAGIVKNLVQQVAK--TCPKACIGIIT  118 (312)
T ss_dssp             CSC---CTTCCHHHHHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             CCC---CCCCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEEec
Confidence            752   22345678899999999999999988  34444444444

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.09  E-value=1.8e-05  Score=68.16  Aligned_cols=95  Identities=17%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcccc---CceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFF---PGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +||||.|.||||++|+.+++.|.+.+. +++++.+..+..........  .+   ..+.+.+.+   + +.++|+||.++
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~--~~~g~~~~~~~~~~---~-~~~vDvV~~a~   76 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHP--NLRGRTNLKFVPPE---K-LEPADILVLAL   76 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCG--GGTTTCCCBCBCGG---G-CCCCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCc--hhcCcccccccchh---H-hcCCCEEEEcC
Confidence            357999999999999999999998764 88887765433222211100  01   112222322   3 47899999998


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  144 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~  144 (328)
                      +..                   .+..++..+.+  .+. ++|-+|+.
T Consensus        77 g~~-------------------~s~~~a~~~~~--aG~-~VId~Sa~  101 (345)
T 2ozp_A           77 PHG-------------------VFAREFDRYSA--LAP-VLVDLSAD  101 (345)
T ss_dssp             CTT-------------------HHHHTHHHHHT--TCS-EEEECSST
T ss_pred             CcH-------------------HHHHHHHHHHH--CCC-EEEEcCcc
Confidence            742                   12355555555  354 57777774

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.07  E-value=8.7e-06  Score=63.60  Aligned_cols=74  Identities=14%  Similarity=0.068  Sum_probs=55.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh--cCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC--IQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vi~~a~   98 (328)
                      ..++|+|+| .|.+|..+++.|.+. |++|+++++++.+.......+.  .....|..+.+.+.++  +.++|+||.+.+
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~--~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR--NVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTC--CEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCC--CEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            356899999 699999999999999 9999999998876544332211  0122366666777776  778999999865

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.06  E-value=1.3e-05  Score=68.91  Aligned_cols=94  Identities=16%  Similarity=0.170  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEe-cCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |+|||+|.||||++|+.+++.|.+++|   +++++. ++.... ...-.     ...+++.+.+ . ..+.++|+||.++
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~-~~~~~-----g~~i~~~~~~-~-~~~~~~DvV~~a~   76 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-RMGFA-----ESSLRVGDVD-S-FDFSSVGLAFFAA   76 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-EEEET-----TEEEECEEGG-G-CCGGGCSEEEECS
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC-ccccC-----CcceEEecCC-H-HHhcCCCEEEEcC
Confidence            357999999999999999999997654   556554 322211 11000     0112222221 1 2246899999998


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                      +.                   ..+..+++.+.+  .+. ++|-+|+..
T Consensus        77 g~-------------------~~s~~~a~~~~~--aG~-kvId~Sa~~  102 (340)
T 2hjs_A           77 AA-------------------EVSRAHAERARA--AGC-SVIDLSGAL  102 (340)
T ss_dssp             CH-------------------HHHHHHHHHHHH--TTC-EEEETTCTT
T ss_pred             Cc-------------------HHHHHHHHHHHH--CCC-EEEEeCCCC
Confidence            63                   113456666666  455 466666643

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.04  E-value=1.4e-05  Score=68.03  Aligned_cols=114  Identities=14%  Similarity=0.118  Sum_probs=75.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|||.|+| +|.+|..++..|+..|. +|+++++++.+...........   ......+.-.++ .++++++|+||.+++
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag   82 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG   82 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence            57999999 59999999999999887 9999999886542111000000   001123321122 367889999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+.+..|....+.+++.+.+.  ....++.+-|
T Consensus        83 ~p~k---~G~~R~dl~~~N~~i~~~i~~~i~~~--~p~a~vivvt  122 (321)
T 3p7m_A           83 VPRK---PGMSRDDLLGINIKVMQTVGEGIKHN--CPNAFVICIT  122 (321)
T ss_dssp             CCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECC
T ss_pred             cCCC---CCCCHHHHHHHhHHHHHHHHHHHHHH--CCCcEEEEec
Confidence            7522   22345677889999999999999883  4444444443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.03  E-value=3.5e-06  Score=62.77  Aligned_cols=76  Identities=14%  Similarity=0.057  Sum_probs=56.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~~   99 (328)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|+++++++...........  .....|..+++.++++ +.++|+||-+.+.
T Consensus         5 ~~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            5 DICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGV--RAVLGNAANEEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred             cCCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCC--CEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence            34568999995 999999999999999999999999876554432211  1223466677777654 5689999998753

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.02  E-value=1.6e-05  Score=68.13  Aligned_cols=104  Identities=21%  Similarity=0.241  Sum_probs=71.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCcc--ccc---CCCCCccccC-ceeecCChhhHhhc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKA--ELI---FPGKKTRFFP-GVMIAEEPQWRDCI   87 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~~~---~~~~~~~~~~-~~d~~~~~~~~~~~   87 (328)
                      .++.||.|+||+|.||+.|+-.|.....       ++.+++..+...  ...   +....   +. .....-..+..+++
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~---~~~~~~~~~~~~~~~a~   98 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA---FPLLDKVVVTADPRVAF   98 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT---CTTEEEEEEESCHHHHT
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC---ccCCCcEEEcCChHHHh
Confidence            3445999999999999999998887532       788888765321  100   00000   11 11222233456789


Q ss_pred             CCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           88 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        88 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +++|+||-+||.+.   .......+.++.|..-.+.+.+.+.+
T Consensus        99 ~~advVvi~aG~pr---kpGmtR~DLl~~Na~I~~~~~~~i~~  138 (345)
T 4h7p_A           99 DGVAIAIMCGAFPR---KAGMERKDLLEMNARIFKEQGEAIAA  138 (345)
T ss_dssp             TTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC---CCCCCHHHHHHHhHHHHHHHHHHHHh
Confidence            99999999999752   23345678899999999999999887

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.02  E-value=6.4e-06  Score=70.61  Aligned_cols=119  Identities=13%  Similarity=0.118  Sum_probs=75.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCc---cccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ++|||.|+|| |.+|..++..|...|+ +|+++++++............   .......+.-..+++++++++|+||.++
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~   86 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA   86 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence            4579999997 9999999999999998 999999987654331100000   0000112222245666789999999999


Q ss_pred             CCCCCCCCC--hhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWS--SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +.+......  .....+....|....+.+.+.+.+.  ....++.+.|
T Consensus        87 g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~vi~~t  132 (331)
T 1pzg_A           87 GLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY--CPKTFIIVVT  132 (331)
T ss_dssp             SCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH--CTTCEEEECC
T ss_pred             CCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH--CCCcEEEEEc
Confidence            864221110  0022345667888888888888883  3444555554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.02  E-value=1e-05  Score=69.67  Aligned_cols=80  Identities=10%  Similarity=-0.033  Sum_probs=59.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHH-hCCCeEEEEecCCCcccccC----------------CCCCccccCceeecCChhh
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKAELIF----------------PGKKTRFFPGVMIAEEPQW   83 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~~   83 (328)
                      ..+|++|||||++.+|.+.+..|. ..|..|+++.+.........                ..+.......+|+.+.+.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            357899999999999999999998 57899999988765443211                1111112446799988877


Q ss_pred             HhhcC-------CCcEEEECCCCC
Q 020254           84 RDCIQ-------GSTAVVNLAGTP  100 (328)
Q Consensus        84 ~~~~~-------~~d~vi~~a~~~  100 (328)
                      +++++       ++|++||++|..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            76653       789999999964

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.01  E-value=8e-06  Score=67.87  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=45.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEE-ecCCCcc--cccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVL-TRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      .+|||+|+|++|.+|+.+++.+.+ .+++++++ ++++...  ........   ....++...+++++++.++|+||+++
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g---~~~~~v~~~~dl~~~l~~~DvVIDft   80 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAG---AGKTGVTVQSSLDAVKDDFDVFIDFT   80 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSS---SSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcC---CCcCCceecCCHHHHhcCCCEEEEcC
Confidence            347999999999999999999875 57888855 4443221  11111000   11122222345566667899999887


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        81 ~   81 (273)
T 1dih_A           81 R   81 (273)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.99  E-value=1.3e-05  Score=68.33  Aligned_cols=114  Identities=15%  Similarity=0.158  Sum_probs=75.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCC--cccc-CceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKK--TRFF-PGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~-~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ++|||.|+|| |.+|..++..|+..|  .+|.++++++.+.........  .... ..+.+.. + -.++++++|+||.+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~-~~~a~~~aDvVvi~   81 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G-EYSDCHDADLVVIC   81 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C-CGGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C-CHHHhCCCCEEEEC
Confidence            4579999998 999999999999877  489999987543221100000  0001 1223332 2 25668999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ++.+...   .....+....|....+.+.+.+.+  .....++.+.|
T Consensus        82 ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~viv~t  123 (317)
T 3d0o_A           82 AGAAQKP---GETRLDLVSKNLKIFKSIVGEVMA--SKFDGIFLVAT  123 (317)
T ss_dssp             CCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             CCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEec
Confidence            9875322   223456778899999999999998  44455556554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.97  E-value=1.8e-05  Score=67.06  Aligned_cols=115  Identities=16%  Similarity=0.124  Sum_probs=74.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC--CcccccCCCCCcc-cc--CceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKKTR-FF--PGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~-~~--~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      .++||.|+|+ |.+|..++..|+..|+ +|+++++++  ............. .+  ....+.-.++ .+.++++|+||.
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIi   84 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVI   84 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEE
Confidence            4579999996 9999999999999999 999999984  2211110000000 00  0111211111 356789999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ++|.+..   ......+.+..|....+.+.+.+.+  .....++.+-|
T Consensus        85 aag~p~k---pg~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~vlvvs  127 (315)
T 3tl2_A           85 TAGIARK---PGMSRDDLVATNSKIMKSITRDIAK--HSPNAIIVVLT  127 (315)
T ss_dssp             CCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEECC
T ss_pred             eCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEECC
Confidence            9997522   2234577888999999999999988  34444444443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.96  E-value=3.7e-06  Score=67.75  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=55.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++.....+..... ......|..+.+.++++ +.++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLK-ATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSS-SEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcC-CeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            68999995 999999999999999999999998876544321110 01334577788888776 679999998865

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.94  E-value=1.6e-05  Score=66.92  Aligned_cols=67  Identities=18%  Similarity=0.288  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||+|.|+|+||.+|+.+++.|.+.|++|++++|++.........       +++..   +..+.++++|+||.+..
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-------GIPLT---DGDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-------TCCCC---CSSGGGGTCSEEEECSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-------CCCcC---CHHHHhcCCCEEEEcCC
Confidence            457999999889999999999999999999999987654433221       12222   23456678999999864

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.93  E-value=1.9e-05  Score=66.84  Aligned_cols=113  Identities=14%  Similarity=0.150  Sum_probs=72.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCcc-c--cCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR-F--FPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~-~--~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++.+........... .  .....+.-. ...+.++++|+||.++|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCHHHhCCCCEEEECCC
Confidence            68999996 9999999999998886  9999999886533111000000 0  001222211 22467789999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        79 ~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~vivvt  118 (314)
T 3nep_X           79 LPRS---PGMSRDDLLAKNTEIVGGVTEQFVE--GSPDSTIIVVA  118 (314)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHHHT--TCTTCEEEECC
T ss_pred             CCCC---CCCCHHHHHHhhHHHHHHHHHHHHH--hCCCcEEEecC
Confidence            6422   2234567888999999999999998  44444544443

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.90  E-value=1.5e-05  Score=71.20  Aligned_cols=77  Identities=19%  Similarity=0.345  Sum_probs=53.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCChhhHhhcCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d   91 (328)
                      +|+|.|+| +|++|..++..|.+.||+|++++|++.+...+...........           ..+.-..++.++++++|
T Consensus         2 ~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            2 SLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            37999999 6999999999999999999999999876544432110000000           01222235666788899


Q ss_pred             EEEECCCCC
Q 020254           92 AVVNLAGTP  100 (328)
Q Consensus        92 ~vi~~a~~~  100 (328)
                      +||-+...+
T Consensus        81 vViiaVptp   89 (450)
T 3gg2_A           81 IIFIAVGTP   89 (450)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEcCCC
Confidence            999998653

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.88  E-value=2.7e-05  Score=65.17  Aligned_cols=113  Identities=14%  Similarity=0.127  Sum_probs=74.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCc-cccC--ceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT-RFFP--GVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~--~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.||+.++..|+.++  -++.+++..+....-....... ..+.  ...+.-..+. +.++++|+||-.||
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-~~~~~aDvVvitAG   78 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAG   78 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-GGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-HHhCCCCEEEEecC
Confidence            79999995 999999999998876  4899999876432211000000 0000  0111111122 46789999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+.++.|..-.+.+.+.+.+  ...+.++.+-|
T Consensus        79 ~prk---pGmtR~dLl~~Na~I~~~i~~~i~~--~~p~aivlvvs  118 (294)
T 2x0j_A           79 LARK---PGMTRLDLAHKNAGIIKDIAKKIVE--NAPESKILVVT  118 (294)
T ss_dssp             CCCC---SSSCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEEECS
T ss_pred             CCCC---CCCchHHHHHHHHHHHHHHHHHHHh--cCCceEEEEec
Confidence            7632   3345678899999999999999999  45555555544

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.88  E-value=2.9e-05  Score=65.57  Aligned_cols=66  Identities=12%  Similarity=0.061  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|+|.|+| .|.+|..+++.|++.||+|++.+|++.+........       +.  -.++++++++ +|+||.+..
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~--~~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG-------AT--LADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT-------CE--ECSSHHHHTT-SSEEEECCS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CE--EcCCHHHHHh-CCEEEEECC
Confidence            457999999 799999999999999999999999987765543321       22  2345667777 999999864

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.88  E-value=8.7e-06  Score=71.06  Aligned_cols=74  Identities=14%  Similarity=0.140  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+|+ |.+|..+++.|...|++|++++|++.+...... ...   ...+|..+.+++.+.+.++|+||++++.
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~---~~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG---RVITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT---SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc---eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            3579999998 999999999999999999999998765433321 111   1235666777888888899999999885

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.87  E-value=3.5e-06  Score=63.08  Aligned_cols=70  Identities=9%  Similarity=0.144  Sum_probs=54.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++++|++.+...+...     + +++....+++.+.+.++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~-----~-~~~~~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK-----Y-EYEYVLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH-----H-TCEEEECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH-----h-CCceEeecCHHHHhcCCCEEEEeCCC
Confidence            679999995 9999999999999999999999987765443221     1 13444556677788899999999875

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.86  E-value=2.4e-05  Score=66.74  Aligned_cols=116  Identities=12%  Similarity=0.175  Sum_probs=71.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCc---cccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      .+|||.|+|| |.+|..++..|+..|+ +|+++++++.+..........   .......+....++ ++++++|+||.++
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~   80 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA   80 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence            3579999997 9999999999999998 999999987654321110000   00011222222344 6789999999999


Q ss_pred             CCCCCCCCC--hhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEE
Q 020254           98 GTPIGTRWS--SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  141 (328)
Q Consensus        98 ~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  141 (328)
                      +.+......  +....+....|+...+.+.+.+.+.  ....++.+
T Consensus        81 g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv  124 (322)
T 1t2d_A           81 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN--CPNAFIIV  124 (322)
T ss_dssp             SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH--CTTSEEEE
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEE
Confidence            864221111  0002344567777788888888773  33444433

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.86  E-value=1.8e-05  Score=68.49  Aligned_cols=75  Identities=21%  Similarity=0.187  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-----CCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~   96 (328)
                      ..++|||+||+|.+|..+++.+...|.+|++++|++.+.......+.   ...+|+.+.+++.+.+.     ++|+||++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG---EVFIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC---CEEEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC---ceEEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            35689999999999999999999999999999998776543322211   11246554444443332     69999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      ++.
T Consensus       246 ~g~  248 (347)
T 2hcy_A          246 SVS  248 (347)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            874

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.85  E-value=3.1e-05  Score=67.00  Aligned_cols=73  Identities=16%  Similarity=0.218  Sum_probs=45.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCc---eeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPG---VMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++||.|.||+|++|+.+++.|.+++ .+++++.+..+..........  .+..   .|+.-.+  ++.++++|+||.|++
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~--~~~~~v~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFP--HLRAQKLPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCG--GGTTSCCCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCc--hhcCcccccceecc--hhHhcCCCEEEEcCC
Confidence            4699999999999999999999876 488888665433211110000  0111   1222111  344568999999986


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus        92 ~   92 (359)
T 1xyg_A           92 H   92 (359)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.84  E-value=6.8e-05  Score=63.71  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=68.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.+|..++..|.+.  |++|+++++++.+......   ...........+....+.++ ++++|+||.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~   78 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG   78 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence            68999997 99999999999985  7999999998765442210   00000001112222223444 789999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      .+..   ......+....|+...+.+++.+.+.
T Consensus        79 ~p~~---~g~~r~dl~~~n~~i~~~i~~~i~~~  108 (310)
T 1guz_A           79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMKH  108 (310)
T ss_dssp             CCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            6422   12224567778888888999988873

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.84  E-value=2e-05  Score=63.30  Aligned_cols=66  Identities=18%  Similarity=0.303  Sum_probs=50.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|+|.|+| +|.+|+.+++.|.+.|++|++++|++.+.......       ++...   ++.++++++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-------AAQVT---FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-------TSEEE---EHHHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-------CCcee---cHHHHHhCCCEEEECCC
Confidence            457999999 89999999999999999999999987654443322       12222   45667789999999865

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.83  E-value=1.4e-05  Score=68.83  Aligned_cols=74  Identities=16%  Similarity=0.087  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~   96 (328)
                      ..++|+|+||+|.||..+++.+...|.+|++++|++.+.......+.   ...+|..+.+++.+.+     .++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---cEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence            45789999999999999999999999999999997655443322111   1124655533333332     268999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      +|
T Consensus       222 ~g  223 (333)
T 1v3u_A          222 VG  223 (333)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.83  E-value=2.4e-05  Score=66.71  Aligned_cols=117  Identities=12%  Similarity=0.172  Sum_probs=75.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCcc-ccC-ceeecCChhhHhhcCCCcEEEE
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR-FFP-GVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~-~~~-~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ...++||.|+|+ |.+|..++..|+..|.  +|++++++..+........... .+. ...+....+.+ .++++|+||.
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi   93 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVII   93 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEE
Confidence            345689999997 9999999999999886  8999998764332211000000 011 11222122333 5889999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +||.+..   ......+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        94 ~aG~~~k---pG~tR~dL~~~N~~I~~~i~~~i~~--~~p~a~vlvvt  136 (331)
T 4aj2_A           94 TAGARQQ---EGESRLNLVQRNVNIFKFIIPNVVK--YSPQCKLLIVS  136 (331)
T ss_dssp             CCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEECS
T ss_pred             ccCCCCC---CCccHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEec
Confidence            9997522   2334567888999999999999988  34444444444

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.80  E-value=2.2e-05  Score=66.82  Aligned_cols=114  Identities=17%  Similarity=0.201  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCc--cccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT--RFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +.|||.|+|| |.+|..++..|+..+.  +|.++++++.+..........  .....+.+.. + -.++++++|+||.++
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~-~~~a~~~aDvVii~a   80 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G-EYSDCKDADLVVITA   80 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C-CGGGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEECC
Confidence            4479999998 9999999999998775  899999976443211100000  0011223332 2 256688999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +.+..   ......+....|+...+.+.+.+.+.  ....++.+-|
T Consensus        81 g~~~~---~g~~R~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~t  121 (318)
T 1ez4_A           81 GAPQK---PGESRLDLVNKNLNILSSIVKPVVDS--GFDGIFLVAA  121 (318)
T ss_dssp             CC-------------CHHHHHHHHHHHHHHHHHT--TCCSEEEECS
T ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEeC
Confidence            87422   12234466788999999999999984  4444555444

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.79  E-value=9e-05  Score=63.93  Aligned_cols=70  Identities=26%  Similarity=0.376  Sum_probs=42.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |++||.|.||||++|+.|++.|.+++|   ++..+..+.+......-.     .....+.+.+  ...+.++|+||.|++
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~-----~~~~~~~~~~--~~~~~~~Dvvf~a~~   73 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----DQDITIEETT--ETAFEGVDIALFSAG   73 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEET-----TEEEEEEECC--TTTTTTCSEEEECSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceec-----CCCceEeeCC--HHHhcCCCEEEECCC
Confidence            357999999999999999999998765   455554333322211100     0112222222  123578999999986

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.78  E-value=6.9e-05  Score=62.00  Aligned_cols=74  Identities=16%  Similarity=0.113  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCcccc-cCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .||||.|+|++|.+|+.+++.+.+. ++++.++ +|+.+.... ......  .... ++.-.+++++++.++|+||+++.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~--g~~~-gv~v~~dl~~ll~~~DVVIDfT~   82 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL--GKQT-GVALTDDIERVCAEADYLIDFTL   82 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT--TCCC-SCBCBCCHHHHHHHCSEEEECSC
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh--CCCC-CceecCCHHHHhcCCCEEEEcCC
Confidence            3589999999999999999999875 5777775 665432110 000000  0011 23334566777778999999863

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.77  E-value=2.7e-05  Score=64.84  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++++|+|+ |.+|++++..|++.|++|++++|+..+...+......  ...++..+.+++.+  .++|+||++++..
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGGTT--CCCSEEEECCSCG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc--cCCeeEecHHHhcc--CCCCEEEECCCCC
Confidence            4579999997 7899999999999999999999987654443321110  11244445444433  6899999999863

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.76  E-value=2.5e-05  Score=66.58  Aligned_cols=115  Identities=22%  Similarity=0.215  Sum_probs=71.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCc-cccC--ceeecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT-RFFP--GVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~~--~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      .+++||.|+|+ |.+|..++..|+..|.  +|+++++++............ ....  ...+.. + -.+.++++|+||.
T Consensus         4 ~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~-~~~al~~aDvVii   80 (316)
T 1ldn_A            4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G-DYDDCRDADLVVI   80 (316)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C-CGGGTTTCSEEEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C-cHHHhCCCCEEEE
Confidence            35679999998 9999999999988774  899999986432211000000 0000  122322 1 2456889999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +++.......   ...+....|....+.+++.+.+  .....++++-|
T Consensus        81 a~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~--~~p~a~~iv~t  123 (316)
T 1ldn_A           81 CAGANQKPGE---TRLDLVDKNIAIFRSIVESVMA--SGFQGLFLVAT  123 (316)
T ss_dssp             CCSCCCCTTT---CSGGGHHHHHHHHHHHHHHHHH--HTCCSEEEECS
T ss_pred             cCCCCCCCCC---CHHHHHHcChHHHHHHHHHHHH--HCCCCEEEEeC
Confidence            9987533221   2234456777888888888887  33444455443

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.74  E-value=6.5e-05  Score=64.14  Aligned_cols=75  Identities=20%  Similarity=0.279  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCC---CcccccC---CCCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR---SKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      .|+||.|+||||++|+.|++.|.+. .+++..+.++.   +....+.   +...  ......+.+..+.+++++++|+||
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~--~~~~~~v~~~~~~~~~~~~~Dvvf   80 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLK--GIVELPLQPMSDISEFSPGVDVVF   80 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGT--TTCCCBEEEESSGGGTCTTCSEEE
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCcccc--CccceeEeccCCHHHHhcCCCEEE
Confidence            3579999999999999999999985 46888775544   2222111   1000  000112222102233447899999


Q ss_pred             ECCC
Q 020254           95 NLAG   98 (328)
Q Consensus        95 ~~a~   98 (328)
                      .|.+
T Consensus        81 ~a~p   84 (337)
T 3dr3_A           81 LATA   84 (337)
T ss_dssp             ECSC
T ss_pred             ECCC
Confidence            9976

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.73  E-value=0.00011  Score=61.05  Aligned_cols=78  Identities=17%  Similarity=0.173  Sum_probs=47.2

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCccc--ccCCCCCccccCceeecCChhhHhhcCCCcEE
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      +.|.+++||.|.|++|.+|+.+++.+.+. +.++.++ +|+++...  .......   ....++.-.+++++++.++|+|
T Consensus        16 ~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G---~~~~gv~v~~dl~~ll~~aDVv   92 (288)
T 3ijp_A           16 TQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG---SDFLGVRITDDPESAFSNTEGI   92 (288)
T ss_dssp             -----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT---CSCCSCBCBSCHHHHTTSCSEE
T ss_pred             hhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc---cCcCCceeeCCHHHHhcCCCEE
Confidence            34456789999999999999999999865 5777766 55433211  0000000   1112333345677788899999


Q ss_pred             EECCC
Q 020254           94 VNLAG   98 (328)
Q Consensus        94 i~~a~   98 (328)
                      |.+..
T Consensus        93 IDFT~   97 (288)
T 3ijp_A           93 LDFSQ   97 (288)
T ss_dssp             EECSC
T ss_pred             EEcCC
Confidence            99863

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.72  E-value=3.7e-05  Score=65.63  Aligned_cols=105  Identities=17%  Similarity=0.194  Sum_probs=66.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ++|||.|+|+ |.+|..++..|+..|+ +|+++++++.............   ......+....+. +.++++|+||.++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~av   80 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITA   80 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence            4579999997 9999999999999998 9999999876543310000000   0001122211234 5678999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      +.+......   ..+....|....+.+++.+.+.
T Consensus        81 g~p~~~g~~---r~d~~~~~~~i~~~i~~~i~~~  111 (317)
T 2ewd_A           81 SIPGRPKDD---RSELLFGNARILDSVAEGVKKY  111 (317)
T ss_dssp             CCSSCCSSC---GGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCc---HHHHHHhhHHHHHHHHHHHHHH
Confidence            865332211   1233455666677788877773

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.71  E-value=1.5e-05  Score=64.92  Aligned_cols=72  Identities=10%  Similarity=0.062  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      ..++|+|+|+ |.+|+.+++.|.+.|+ |+++++++....... ..  ......|..+++.++++ ++++|.||.+.+
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~--~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SG--ANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TT--CEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cC--CeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            4578999996 9999999999999999 999999877654433 11  11334577788888776 789999999865

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.70  E-value=1.1e-05  Score=64.97  Aligned_cols=70  Identities=17%  Similarity=0.145  Sum_probs=48.9

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEE-EecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .++||+|.|+| +|.+|..+++.|.+.|++|++ .+|++.+...+....      ++...  .+..+.++++|+||.+..
T Consensus        20 ~m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~------g~~~~--~~~~~~~~~aDvVilavp   90 (220)
T 4huj_A           20 FQSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF------GASVK--AVELKDALQADVVILAVP   90 (220)
T ss_dssp             GGGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH------TTTEE--ECCHHHHTTSSEEEEESC
T ss_pred             hhcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh------CCCcc--cChHHHHhcCCEEEEeCC
Confidence            34568999999 799999999999999999999 788776654432210      01111  112334678999999863

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.70  E-value=9e-05  Score=63.53  Aligned_cols=93  Identities=20%  Similarity=0.222  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ||||.|.||||++|+.+++.|.+++   .+++++....+......-.     ...+.+.+.+.  ..+.++|+||.|.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~-----~~~i~~~~~~~--~~~~~vDvVf~a~g~   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN-----GKTVRVQNVEE--FDWSQVHIALFSAGG   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET-----TEEEEEEEGGG--CCGGGCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec-----CceeEEecCCh--HHhcCCCEEEECCCc
Confidence            5799999999999999999999873   4677776322211111100     01122322221  233589999999863


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  144 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~  144 (328)
                      .                   .+...+..+.+  .+. ++|-.|+.
T Consensus        76 ~-------------------~s~~~a~~~~~--~G~-~vId~s~~   98 (336)
T 2r00_A           76 E-------------------LSAKWAPIAAE--AGV-VVIDNTSH   98 (336)
T ss_dssp             H-------------------HHHHHHHHHHH--TTC-EEEECSST
T ss_pred             h-------------------HHHHHHHHHHH--cCC-EEEEcCCc
Confidence            1                   13455566666  354 56666765

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.69  E-value=2.9e-05  Score=67.13  Aligned_cols=74  Identities=20%  Similarity=0.127  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhc-----CCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~   95 (328)
                      ..++|||+||+|.+|..+++.+...|.+|++++|++.+..... ..+.   ...+|..+.+++.+.+     .++|+||+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF---DDAFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC---SEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---ceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            3568999999999999999999999999999999876544333 2221   1124554433333322     36999999


Q ss_pred             CCC
Q 020254           96 LAG   98 (328)
Q Consensus        96 ~a~   98 (328)
                      ++|
T Consensus       232 ~~g  234 (345)
T 2j3h_A          232 NVG  234 (345)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            987

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.68  E-value=0.00011  Score=62.78  Aligned_cols=115  Identities=14%  Similarity=0.227  Sum_probs=71.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCccc--ccC-CCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAE--LIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ++|||.|+|+ |.+|..++..|...|+  +|++++|++....  ... .... .......+....+ .+.++++|+||.+
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~-~~~~~~aD~Vii~   82 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS-SFYPTVSIDGSDD-PEICRDADMVVIT   82 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG-GGSTTCEEEEESC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh-hhcCCeEEEeCCC-HHHhCCCCEEEEC
Confidence            4579999997 9999999999999998  9999999864332  110 1100 0000122221112 2456789999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  144 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~  144 (328)
                      ++.+..   ......+....|....+.+++.+.+  .....+|...+-
T Consensus        83 v~~~~~---~g~~r~~~~~~n~~~~~~~~~~i~~--~~~~~~vi~~~N  125 (319)
T 1lld_A           83 AGPRQK---PGQSRLELVGATVNILKAIMPNLVK--VAPNAIYMLITN  125 (319)
T ss_dssp             CCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCTTSEEEECCS
T ss_pred             CCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEecC
Confidence            975422   1223456677888888888888877  333445444443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.67  E-value=1.7e-05  Score=68.15  Aligned_cols=74  Identities=15%  Similarity=0.071  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHh---hc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~--~~~d~vi~~   96 (328)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++.+.......+.   ...+|..+.+..++   ..  .++|+||++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~  216 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDS  216 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence            35689999999999999999999999999999998655433322111   11245545443333   22  268999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      +|
T Consensus       217 ~g  218 (327)
T 1qor_A          217 VG  218 (327)
T ss_dssp             SC
T ss_pred             Cc
Confidence            87

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.67  E-value=5.1e-05  Score=64.75  Aligned_cols=113  Identities=19%  Similarity=0.233  Sum_probs=73.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ++|||.|+|| |.+|..++..|+..+.  +|.++++++.+.....   .... .....+.+.. + -.++++++|+||.+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~-~-~~~a~~~aDvVii~   83 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYS-A-EYSDAKDADLVVIT   83 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEE-C-CGGGGGGCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEE-C-CHHHhCCCCEEEEc
Confidence            4579999998 9999999999988775  8999999764432211   0100 0011233332 2 25668899999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ++.+..   ......+....|+...+.+.+.+.+.  ....++.+-|
T Consensus        84 ag~~~k---~g~~R~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~t  125 (326)
T 2zqz_A           84 AGAPQK---PGETRLDLVNKNLKILKSIVDPIVDS--GFNGIFLVAA  125 (326)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHHHHHH--TCCSEEEECS
T ss_pred             CCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeC
Confidence            987422   12334567788999999999999883  4444444443

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.67  E-value=0.00013  Score=63.18  Aligned_cols=73  Identities=14%  Similarity=0.143  Sum_probs=48.7

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .|..+|+|.|+| .|.+|..+++.|++.|++|++++|++.+...+.....      ....+.+++.+..+.+|+||.+..
T Consensus        18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~------~~~~s~~e~~~~a~~~DvVi~~vp   90 (358)
T 4e21_A           18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGI------AGARSIEEFCAKLVKPRVVWLMVP   90 (358)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTC------BCCSSHHHHHHHSCSSCEEEECSC
T ss_pred             hhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCC------EEeCCHHHHHhcCCCCCEEEEeCC
Confidence            344568999999 7999999999999999999999999876655443211      011122333233334599998864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.67  E-value=3e-05  Score=67.21  Aligned_cols=74  Identities=14%  Similarity=0.136  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhcC--CCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCIQ--GSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~--~~d~vi~~   96 (328)
                      ...+|+|+||+|.+|..+++.+...|.+|++++|++.+.......+.   ...+|..+.+..+   +...  ++|+||++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  246 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEM  246 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC---CEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence            35689999999999999999999999999999998765443322111   1124554443333   2222  69999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      +|
T Consensus       247 ~G  248 (351)
T 1yb5_A          247 LA  248 (351)
T ss_dssp             CH
T ss_pred             CC
Confidence            87

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.66  E-value=5e-05  Score=64.57  Aligned_cols=69  Identities=17%  Similarity=0.271  Sum_probs=51.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ...||+|.|+| .|.+|..+++.|++.||+|++.+|++.+...+....       +..  .++..++++++|+||-+..
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~--~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHG-------ASV--CESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeE--cCCHHHHHHhCCEEEEEcC
Confidence            34568999999 799999999999999999999999987655543221       122  2345566677888888864

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.66  E-value=6.1e-05  Score=64.43  Aligned_cols=104  Identities=16%  Similarity=0.220  Sum_probs=67.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCc---cccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ++|||.|+|| |.+|..++..|+..|+ +|+++++++............   .......+.-..++ ++++++|+||.++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~av   90 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITA   90 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcC
Confidence            4479999997 9999999999999998 999999987654421100000   00001122221334 6788999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +.+......   ..+....|....+.+.+.+.+
T Consensus        91 g~p~k~g~t---r~dl~~~n~~i~~~i~~~i~~  120 (328)
T 2hjr_A           91 GVPRKPNMT---RSDLLTVNAKIVGSVAENVGK  120 (328)
T ss_dssp             SCCCCTTCC---SGGGHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCc---hhhHHhhhHHHHHHHHHHHHH
Confidence            865321111   123455677778888888877

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.65  E-value=4.1e-05  Score=65.96  Aligned_cols=74  Identities=16%  Similarity=0.103  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-CCCCCccccCceeecCChhhHhh---c-CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDC---I-QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~---~-~~~d~vi~~   96 (328)
                      ...+|||+||+|.+|..+++.+...|.+|++++|++.+.... ...+.   ...+|..+.+..+.+   . .++|+||++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  225 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF---DGAIDYKNEDLAAGLKRECPKGIDVFFDN  225 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---SEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---CEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence            457899999999999999999999999999999987765544 23221   112454444333222   2 369999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      +|
T Consensus       226 ~g  227 (336)
T 4b7c_A          226 VG  227 (336)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.65  E-value=5.2e-05  Score=64.21  Aligned_cols=111  Identities=18%  Similarity=0.259  Sum_probs=67.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.+|..++..|+..|+  +|+++++++.+.....   .... .......+.. ++ .+.++++|+||.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~-~~-~~a~~~aDvVIi~~~   76 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWH-GG-HSELADAQVVILTAG   76 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEE-EC-GGGGTTCSEEEECC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEE-CC-HHHhCCCCEEEEcCC
Confidence            58999997 9999999999999998  9999999865322110   0000 0011222321 22 356889999999997


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+....|+...+.+++.+.+.  ....++.+.|
T Consensus        77 ~~~~---~g~~r~dl~~~n~~i~~~i~~~i~~~--~p~~~vi~~t  116 (304)
T 2v6b_A           77 ANQK---PGESRLDLLEKNADIFRELVPQITRA--APDAVLLVTS  116 (304)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHH--CSSSEEEECS
T ss_pred             CCCC---CCCcHHHHHHhHHHHHHHHHHHHHHh--CCCeEEEEec
Confidence            6421   12233456678888888998888873  3344444433

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.64  E-value=2.2e-05  Score=67.59  Aligned_cols=75  Identities=16%  Similarity=0.066  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~   96 (328)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++.+.......+.   ...+|..+.+..+   +..  .++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC---HHTINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            35689999999999999999999999999999998754433222111   1124554443332   322  269999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1wly_A          222 IGK  224 (333)
T ss_dssp             SCT
T ss_pred             CcH
Confidence            874

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.64  E-value=6.3e-05  Score=64.04  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc------cCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF------FPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      +||+|.|+| .|.+|..++..|.+.|++|++++|++.....+........      ...++..+.+++.+.++++|+||-
T Consensus         2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~   80 (316)
T 2ew2_A            2 NAMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA   80 (316)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence            357999999 5999999999999999999999998755433322110000      001222233333344458999999


Q ss_pred             CCC
Q 020254           96 LAG   98 (328)
Q Consensus        96 ~a~   98 (328)
                      +..
T Consensus        81 ~v~   83 (316)
T 2ew2_A           81 LTK   83 (316)
T ss_dssp             CSC
T ss_pred             Eec
Confidence            864

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.63  E-value=0.0003  Score=62.55  Aligned_cols=76  Identities=21%  Similarity=0.364  Sum_probs=54.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCcee-----------ecCChhhHhhcCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~~~~~~~~~~~~~d~   92 (328)
                      .+|.|+| .|++|..++..|++.||+|++++|++.+...+.........+.++           +.-..++.++++++|+
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            5899999 799999999999999999999999998876665432111011111           2122456677889999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      ||-+.+.+
T Consensus        88 vii~Vptp   95 (446)
T 4a7p_A           88 VFIAVGTP   95 (446)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99997653

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.63  E-value=7.4e-05  Score=64.66  Aligned_cols=34  Identities=38%  Similarity=0.585  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS   56 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~   56 (328)
                      ++||.|.||+|++|+.+++.|.+.+ .+|+++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            4699999999999999999998875 688888654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.62  E-value=3e-05  Score=65.88  Aligned_cols=115  Identities=14%  Similarity=0.118  Sum_probs=73.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCc-cccC-ceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT-RFFP-GVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ..+||.|+|+ |.+|..++..|+..|.  +|++++++..+.......... ..+. ...+.-..+++. ++++|+||-+|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIita   97 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITA   97 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeC
Confidence            4689999998 9999999999999886  899999976533211100000 0010 112221223333 78999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      |.+...   .....+.+..|..-.+.+.+.+.+  .....++.+-|
T Consensus        98 G~p~kp---G~tR~dll~~N~~I~k~i~~~I~k--~~P~a~ilvvt  138 (330)
T 3ldh_A           98 GARQQE---GESRLNLVQRNVNIFKFIIPNIVK--HSPDCLKELHP  138 (330)
T ss_dssp             SCCCCS---SCCTTGGGHHHHHHHHHHHHHHHH--HCTTCEEEECS
T ss_pred             CCCCCC---CCCHHHHHHhhHHHHHHHHHHHHh--hCCCceEEeCC
Confidence            975322   223456777888888999998888  34444444443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.62  E-value=9.2e-05  Score=61.52  Aligned_cols=69  Identities=12%  Similarity=0.087  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+..+...+...        +.....+++.+.+.++|+||++...
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--------~~~~~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--------INKINLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--------CEEECHHHHHHTGGGCSEEEECCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--------cccccHhhHHHHhcCCCEEEECccC
Confidence            3578999995 8999999999999998 899999998776655432        2333445667778889999999764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.61  E-value=0.00035  Score=58.94  Aligned_cols=55  Identities=15%  Similarity=0.220  Sum_probs=44.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++++|.|+||.|.+|..++..|.+.|++|++++|++..                      +..++++++|+||.+.-
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~----------------------~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA----------------------VAESILANADVVIVSVP   74 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG----------------------GHHHHHTTCSEEEECSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc----------------------CHHHHhcCCCEEEEeCC
Confidence            35689999999999999999999999999999887531                      23456677888888753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.59  E-value=3.4e-05  Score=66.95  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~   96 (328)
                      ...+|+|+||+|.+|..+++.+...|.+|++++|++.+.......+.   ...+|..+.+..+   +..  .++|+||++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  238 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA---AAGFNYKKEDFSEATLKFTKGAGVNLILDC  238 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---cEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence            35689999999999999999999999999999998765443321111   1124554443333   323  269999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      +|.
T Consensus       239 ~G~  241 (354)
T 2j8z_A          239 IGG  241 (354)
T ss_dssp             SCG
T ss_pred             CCc
Confidence            974

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.59  E-value=0.00021  Score=61.72  Aligned_cols=107  Identities=11%  Similarity=0.143  Sum_probs=69.0

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCC-----eEEEEecCCCccccc-------CCCCCccccCceeecCChhhHhh
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDC   86 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~   86 (328)
                      .+..++||.|+||+|.||++++-.|+..+.     .|.+.+.........       +.+........+.+.+  .-.+.
T Consensus        28 ~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~--~~y~~  105 (375)
T 7mdh_A           28 SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI--DPYEV  105 (375)
T ss_dssp             -CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES--CHHHH
T ss_pred             hCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEec--CCHHH
Confidence            334567999999999999999999988753     265544433221100       0110000011233322  33577


Q ss_pred             cCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           87 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        87 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      ++++|+||-+||.+   ........+.+..|..-.+.+.+.+.+
T Consensus       106 ~~daDvVVitag~p---rkpG~tR~DLl~~N~~I~k~i~~~i~~  146 (375)
T 7mdh_A          106 FEDVDWALLIGAKP---RGPGMERAALLDINGQIFADQGKALNA  146 (375)
T ss_dssp             TTTCSEEEECCCCC---CCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCEEEEcCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999865   223345678899999999999999887

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.59  E-value=0.00014  Score=61.65  Aligned_cols=111  Identities=22%  Similarity=0.266  Sum_probs=73.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|| |.+|..++..|+..+  .+|.++++++.+......   ... .....+.+.. +. .++++++|+||.+++
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~-~~~~~~~v~~-~~-~~a~~~aD~Vii~ag   76 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT-PFAHPVWVWA-GS-YGDLEGARAVVLAAG   76 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG-GGSCCCEEEE-CC-GGGGTTEEEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH-hhcCCeEEEE-CC-HHHhCCCCEEEECCC
Confidence            68999997 999999999999876  689999998644322110   000 0011223332 22 566899999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+...   .....+....|....+.+.+.+.+.  ....++.+-|
T Consensus        77 ~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~t  116 (310)
T 2xxj_A           77 VAQRP---GETRLQLLDRNAQVFAQVVPRVLEA--APEAVLLVAT  116 (310)
T ss_dssp             CCCCT---TCCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECS
T ss_pred             CCCCC---CcCHHHHHHhhHHHHHHHHHHHHHH--CCCcEEEEec
Confidence            75322   2234567788999999999999883  4444444433

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.59  E-value=4.2e-05  Score=66.49  Aligned_cols=72  Identities=18%  Similarity=0.110  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCC-CCCccccCceeecCChh---hHhhcC-CCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQ---WRDCIQ-GSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~---~~~~~~-~~d~vi~~a   97 (328)
                      .+|+|+||+|.||..+++.+...|. +|+++++++.+...... .+.   ...+|..+.+.   +.+... ++|+||+++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~  238 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF---DAAINYKKDNVAEQLRESCPAGVDVYFDNV  238 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC---SEEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---ceEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence            7999999999999999999999999 99999998755443322 111   11245544332   222222 699999998


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      |
T Consensus       239 G  239 (357)
T 2zb4_A          239 G  239 (357)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.58  E-value=8.8e-05  Score=66.22  Aligned_cols=76  Identities=26%  Similarity=0.383  Sum_probs=52.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccC-----------ceeecCChhhHhhcCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-----------GVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~d~   92 (328)
                      |+|.|+| +|++|..++..|.+.||+|++++|++.+...+..........           ...+.-..++.++++++|+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            5899999 799999999999999999999999877655443321100000           0012223345566778999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      ||.+...+
T Consensus        80 viiaVptp   87 (436)
T 1mv8_A           80 SFICVGTP   87 (436)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99998643

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.57  E-value=5.5e-05  Score=63.78  Aligned_cols=75  Identities=15%  Similarity=0.109  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+|+ |.+|+.++..|++.|. +|++++|+..+...+......  ... +..+.+++.+.+.++|+||++++..
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~--~~~-~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE--RRS-AYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS--SSC-CEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh--ccC-ceeeHHHHHhhhccCCEEEECCCCC
Confidence            4579999996 8899999999999997 999999987665444321100  000 2333356777788999999998864

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.55  E-value=0.00034  Score=62.68  Aligned_cols=77  Identities=18%  Similarity=0.184  Sum_probs=53.8

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhC-CC-eEEEEecCCC----cccccCCCCCcc--c-------------cCceeec
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRS----KAELIFPGKKTR--F-------------FPGVMIA   78 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~----~~~~~~~~~~~~--~-------------~~~~d~~   78 (328)
                      +.++|+|.|+| .|++|..++..|++. || +|++++|++.    +...+.......  .             ..++.++
T Consensus        15 ~~~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t   93 (478)
T 3g79_A           15 RGPIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT   93 (478)
T ss_dssp             HCSCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE
T ss_pred             cCCCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe
Confidence            34568999999 799999999999999 99 9999999998    554443321100  0             0112222


Q ss_pred             CChhhHhhcCCCcEEEECCCCC
Q 020254           79 EEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        79 ~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      +.   .++++++|+||-+...+
T Consensus        94 td---~ea~~~aDvViiaVptp  112 (478)
T 3g79_A           94 PD---FSRISELDAVTLAIQTP  112 (478)
T ss_dssp             SC---GGGGGGCSEEEECCCCC
T ss_pred             Cc---HHHHhcCCEEEEecCCc
Confidence            22   35677899999998754

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.54  E-value=0.0002  Score=61.81  Aligned_cols=33  Identities=24%  Similarity=0.537  Sum_probs=28.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEe
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLT   54 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~   54 (328)
                      +|+||.|.||+|++|+.+++.|.+.. .+|+++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            45799999999999999999998765 5787775

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.53  E-value=0.00016  Score=61.74  Aligned_cols=112  Identities=19%  Similarity=0.235  Sum_probs=70.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCC--ccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |||.|+|+ |.+|..++..|++.|+  +|+++++++...........  ........+... + .+.++++|+||.+++.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~-d-~~~~~~aDvViiav~~   77 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG-D-YADLKGSDVVIVAAGV   77 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC-C-GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeC-C-HHHhCCCCEEEEccCC
Confidence            68999997 9999999999999999  99999998654332211000  000001122211 2 2457899999999886


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ....   .....+....|....+.+++.+.+.  ....++.+.|
T Consensus        78 ~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~--~~~~~ii~~t  116 (319)
T 1a5z_A           78 PQKP---GETRLQLLGRNARVMKEIARNVSKY--APDSIVIVVT  116 (319)
T ss_dssp             CCCS---SCCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECS
T ss_pred             CCCC---CCCHHHHHHHHHHHHHHHHHHHHhh--CCCeEEEEeC
Confidence            4221   1124466778888888998888873  3344444433

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.52  E-value=0.00042  Score=56.34  Aligned_cols=73  Identities=22%  Similarity=0.248  Sum_probs=50.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a   97 (328)
                      |||+|.|++|.+|+.+++.+.+. ++++.++..............   .-.-+|++.++...+.+     .+.++|+-..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~---~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT   77 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGN---TEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT   77 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTT---CCEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccC---CcEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence            58999999999999999999865 899887765543322221100   02347888888766544     2788888877


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      |.
T Consensus        78 G~   79 (245)
T 1p9l_A           78 GF   79 (245)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.51  E-value=6.2e-05  Score=63.25  Aligned_cols=66  Identities=15%  Similarity=0.211  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||+|.|+| .|.+|..+++.|++.||+|++.+|++.+.......       ++..  .++..++++++|+||-+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~--~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------GARQ--ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------TCEE--CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCee--cCCHHHHHHcCCEEEEEcC
Confidence            47899998 79999999999999999999999998765544321       1122  2345566677899988864

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.51  E-value=0.00011  Score=66.08  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCce-----------eecCChhhHhhcCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGST   91 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d   91 (328)
                      .|+|.|+| +|++|..++..|.+.||+|++++|++.+...+...........+           .+.-..++.++++++|
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD   86 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD   86 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence            47999999 79999999999999999999999987765554432110000111           1111223445667899


Q ss_pred             EEEECCCCC
Q 020254           92 AVVNLAGTP  100 (328)
Q Consensus        92 ~vi~~a~~~  100 (328)
                      +||-+...+
T Consensus        87 vviiaVptp   95 (478)
T 2y0c_A           87 VQFIAVGTP   95 (478)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEeCCC
Confidence            999997653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.51  E-value=7.9e-05  Score=61.85  Aligned_cols=68  Identities=13%  Similarity=0.151  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+|+|.|+|+ |.+|+.+++.|.+.|++ |.+++|++..........      ++..  .++++++++++|+||.+..
T Consensus         9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~------g~~~--~~~~~~~~~~~Dvvi~av~   77 (266)
T 3d1l_A            9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV------EAEY--TTDLAEVNPYAKLYIVSLK   77 (266)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT------TCEE--ESCGGGSCSCCSEEEECCC
T ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc------CCce--eCCHHHHhcCCCEEEEecC
Confidence            3578999995 99999999999999998 888998876544332210      1222  2245566778999999864

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.49  E-value=0.00014  Score=62.83  Aligned_cols=76  Identities=14%  Similarity=0.287  Sum_probs=51.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCcee----ecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVM----IAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d----~~~~~~~~~~~~~~d~vi~   95 (328)
                      .++|+|.|+| +|.+|.+++..|.+.|++|++.+|++.....+...... .....+.    +.-..++.++++++|+||-
T Consensus        27 ~~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil  105 (356)
T 3k96_A           27 PFKHPIAILG-AGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI  105 (356)
T ss_dssp             CCCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred             ccCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence            3467999999 59999999999999999999999986643332211100 0011111    1112356677889999998


Q ss_pred             CC
Q 020254           96 LA   97 (328)
Q Consensus        96 ~a   97 (328)
                      +.
T Consensus       106 aV  107 (356)
T 3k96_A          106 VV  107 (356)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.48  E-value=5.5e-05  Score=64.10  Aligned_cols=69  Identities=12%  Similarity=0.064  Sum_probs=48.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .++|+|.|+| .|.+|..+++.|.+.||+|++.+|++.+...+...+.      ..  -..+..++++++|+||-+..
T Consensus         5 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~------~~--~~~~~~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            5 GTDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGA------CG--AAASAREFAGVVDALVILVV   73 (303)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC------SE--EESSSTTTTTTCSEEEECCS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC------cc--ccCCHHHHHhcCCEEEEECC
Confidence            3457999998 7999999999999999999999998876554432211      01  02234455667788887754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.46  E-value=0.00012  Score=62.09  Aligned_cols=116  Identities=13%  Similarity=0.124  Sum_probs=69.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCC--c-cccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKK--T-RFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ||||.|+| +|.+|..++..|++.|  ++|++++|++...........  . .....+.+.. .+. +.++++|+||.++
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~d~-~~~~~aDvViiav   77 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI-NDW-AALADADVVISTL   77 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE-SCG-GGGTTCSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe-CCH-HHhCCCCEEEEec
Confidence            47999999 7999999999999988  899999998654332211000  0 0001123311 234 5678999999998


Q ss_pred             CCCCCC-CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +..... ........+....|+...+.+++.+.+.  ....++.+.|
T Consensus        78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~--~~~~~ii~~t  122 (309)
T 1hyh_A           78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES--GFHGVLVVIS  122 (309)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHT--TCCSEEEECS
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--CCCcEEEEEc
Confidence            753110 0011122344567777778888888773  3344544444

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.45  E-value=9.1e-05  Score=63.26  Aligned_cols=68  Identities=21%  Similarity=0.274  Sum_probs=52.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..+|+|.|+| .|.+|..+++.|++.|++|++.+|++.+...+...+       +..  .++..++++++|+||-+..
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~--~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG-------ATI--HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CEE--ESSHHHHHTTCSEEEECCS
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CEe--eCCHHHHHhcCCEEEEECC
Confidence            4568999998 699999999999999999999999987655544321       222  2356677788999998864

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.45  E-value=0.00013  Score=62.92  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~   58 (328)
                      ++++|.|+||||++|+.|++.|.+.. .++..+..+.+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s   43 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS   43 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence            45799999999999999999887765 47776654433

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.45  E-value=0.00013  Score=62.92  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~   58 (328)
                      ++++|.|+||||++|+.|++.|.+.. .++..+..+.+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s   43 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS   43 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence            45799999999999999999887765 47776654433

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.45  E-value=0.00012  Score=61.60  Aligned_cols=65  Identities=15%  Similarity=0.216  Sum_probs=50.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+| .|.+|..+++.|.+.||+|++.+|++.+........       +.  -.+++.++++++|+||-+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~--~~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG-------AE--RAATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CE--ECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------Ce--ecCCHHHHHhcCCEEEEEcC
Confidence            7899999 699999999999999999999999987655443221       22  22345666777899998864

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.44  E-value=0.00011  Score=64.88  Aligned_cols=77  Identities=17%  Similarity=0.233  Sum_probs=52.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc---------eeecCChhhHhhcCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG---------VMIAEEPQWRDCIQGST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~d~~~~~~~~~~~~~~d   91 (328)
                      ..+|+|.|+| +|++|..++..|.+ |++|+++++++.+...+...........         ..+.-..++.++++++|
T Consensus        34 ~~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD  111 (432)
T 3pid_A           34 SEFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD  111 (432)
T ss_dssp             -CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred             cCCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence            4568999999 69999999999988 9999999999876555433211000000         01222235567788999


Q ss_pred             EEEECCCC
Q 020254           92 AVVNLAGT   99 (328)
Q Consensus        92 ~vi~~a~~   99 (328)
                      +||-+...
T Consensus       112 vViiaVPt  119 (432)
T 3pid_A          112 YVIIATPT  119 (432)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeCCC
Confidence            99998653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.44  E-value=7e-05  Score=64.95  Aligned_cols=75  Identities=21%  Similarity=0.146  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc----CCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~vi~~a   97 (328)
                      ...+|||+||+|.+|..+++.+...|.+|+++++++.+.......+.   ...+|..+.+..+.+.    .++|+||+++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA---KRGINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---CEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            45689999999999999999999999999999998766544332211   1123444433222222    3799999998


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      |.
T Consensus       244 g~  245 (353)
T 4dup_A          244 GA  245 (353)
T ss_dssp             CG
T ss_pred             CH
Confidence            74

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.43  E-value=0.00015  Score=61.39  Aligned_cols=74  Identities=22%  Similarity=0.148  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...+|+|+||+|.+|...++.+...|.+|+++++++.+.......+.   ...+|..+.+++.+.+.++|+||+ +|.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEECCcchhHHHHhcCceEEEE-CCH
Confidence            34689999999999999999999999999999998766543322211   111333331334444578999999 874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.43  E-value=7.4e-05  Score=62.39  Aligned_cols=77  Identities=19%  Similarity=0.163  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc-ccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+|+ |.+|++++..|.+.|. +|++++|+..+...+....... ....+...+.+++.+.+.++|+||++...
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCC
Confidence            4579999997 8999999999999997 7999999987655442211000 01123444566777888889999999865

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.43  E-value=0.00024  Score=62.68  Aligned_cols=73  Identities=14%  Similarity=0.037  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      .|+|+|+|. |.+|+.+++.|.+.|+.|+++++++.........+.  .....|.++++.++++ +.++|+||-+..
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~--~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGM--KVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTC--CCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCC--eEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            468999995 999999999999999999999999876554432221  1334588888888777 678999999865

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.42  E-value=0.00012  Score=63.85  Aligned_cols=75  Identities=16%  Similarity=0.080  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+|+ |.+|..+++.+...|.+|++++|++.+...... ...   ...++..+.+++.+.+.++|+||.+++.+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~---~~~~~~~~~~~l~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG---RIHTRYSSAYELEGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT---SSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC---eeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence            4579999997 999999999999999999999998765433322 111   11233445567778888999999998754

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.42  E-value=0.0013  Score=48.37  Aligned_cols=64  Identities=13%  Similarity=0.163  Sum_probs=44.7

Q ss_pred             cCCCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           21 ASQMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        21 ~~~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ..+++|.|+|+|   |.+|..+++.|++.|++|+.++.+....            .++.  -..++.++.+.+|+++-+.
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------~G~~--~~~s~~el~~~vDlvii~v   77 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------EGLK--CYRSVRELPKDVDVIVFVV   77 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TTEE--CBSSGGGSCTTCCEEEECS
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------CCee--ecCCHHHhCCCCCEEEEEe
Confidence            346789999987   8999999999999999987766553211            1122  2234555556899999885


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        78 p   78 (138)
T 1y81_A           78 P   78 (138)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.42  E-value=0.00015  Score=61.70  Aligned_cols=72  Identities=11%  Similarity=0.093  Sum_probs=47.8

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC--CcccccCCCCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      |+...+|+|.|+| .|.+|..+++.|.+.|+ +|++.+|++  .........       ++..  .++..++++++|+||
T Consensus        19 ~~~~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~-------g~~~--~~~~~e~~~~aDvVi   88 (312)
T 3qsg_A           19 YFQSNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL-------GVSC--KASVAEVAGECDVIF   88 (312)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT-------TCEE--CSCHHHHHHHCSEEE
T ss_pred             cccCCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC-------CCEE--eCCHHHHHhcCCEEE
Confidence            3334568999999 69999999999999999 999999974  332222111       1222  234556677799999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      -+...
T Consensus        89 ~~vp~   93 (312)
T 3qsg_A           89 SLVTA   93 (312)
T ss_dssp             ECSCT
T ss_pred             EecCc
Confidence            98653

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.41  E-value=0.00038  Score=56.55  Aligned_cols=35  Identities=14%  Similarity=0.348  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEE-EecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~   58 (328)
                      ||||.|+|+ |.+|+.+++.+.+.++++.+ ++|++.
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~   38 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPK   38 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcc
Confidence            689999999 99999999999988777766 455543

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.41  E-value=0.00025  Score=60.41  Aligned_cols=67  Identities=18%  Similarity=0.145  Sum_probs=48.1

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCC-------cccccCCCCCccccCceeecCCh-hhHhhcCCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS-------KAELIFPGKKTRFFPGVMIAEEP-QWRDCIQGS   90 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~   90 (328)
                      ..|+|+|.|+| .|.+|..+++.|++.| ++|++.+|++.       ........       ++    .. +..++++++
T Consensus        21 ~~M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-------g~----~~~s~~e~~~~a   88 (317)
T 4ezb_A           21 QSMMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-------GV----EPLDDVAGIACA   88 (317)
T ss_dssp             HTSCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-------TC----EEESSGGGGGGC
T ss_pred             cccCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-------CC----CCCCHHHHHhcC
Confidence            44678999999 7999999999999999 99999999863       11111110       11    22 345666778


Q ss_pred             cEEEECCC
Q 020254           91 TAVVNLAG   98 (328)
Q Consensus        91 d~vi~~a~   98 (328)
                      |+||-+..
T Consensus        89 DvVi~avp   96 (317)
T 4ezb_A           89 DVVLSLVV   96 (317)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEecC
Confidence            88888864

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=97.40  E-value=0.00049  Score=58.21  Aligned_cols=40  Identities=23%  Similarity=0.349  Sum_probs=34.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   61 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   61 (328)
                      ..+++|.|+|+ |.+|..++..|++.|++|++++|++....
T Consensus        13 ~~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~   52 (302)
T 1f0y_A           13 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   52 (302)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            34678999995 99999999999999999999999876543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.40  E-value=0.0001  Score=63.57  Aligned_cols=74  Identities=18%  Similarity=0.038  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~--~~~d~vi~~   96 (328)
                      ..++|||+||+|.+|..+++.+...|++|++++|++.+.......+.   ...+|..+.+   .+.+..  .++|+||++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  242 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA---DETVNYTHPDWPKEVRRLTGGKGADKVVDH  242 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            35689999999999999999999999999999998765443322111   1124554433   233333  268999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      +|
T Consensus       243 ~g  244 (343)
T 2eih_A          243 TG  244 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.40  E-value=0.0012  Score=57.08  Aligned_cols=70  Identities=16%  Similarity=0.243  Sum_probs=40.6

Q ss_pred             CCeEEEEcCCchhHHHHHHH-HHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQR-LQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||||.|.||+|++|+.|++. |.++++   .++.+..+. ..... +...   ...+.+.+.++.+. ++++|+||.|++
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v-~~~~---g~~i~~~~~~~~~~-~~~~DvVf~a~g   74 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA-PSFG---GTTGTLQDAFDLEA-LKALDIIVTCQG   74 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC-CGGG---TCCCBCEETTCHHH-HHTCSEEEECSC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc-cccC---CCceEEEecCChHH-hcCCCEEEECCC
Confidence            47999999999999999995 544543   566665542 21111 1000   01122222222222 358999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.39  E-value=0.0001  Score=63.38  Aligned_cols=75  Identities=17%  Similarity=0.097  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~   96 (328)
                      ...+|||+||+|.+|...++.+...|.+|+++++++.+.......+.   ..-+|..+.+..+   +..  .++|+||++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA---EYLINASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---cEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998765543332221   1123444433322   222  269999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      +|.
T Consensus       225 ~g~  227 (334)
T 3qwb_A          225 VGK  227 (334)
T ss_dssp             CGG
T ss_pred             CCh
Confidence            873

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.39  E-value=0.00051  Score=57.92  Aligned_cols=111  Identities=15%  Similarity=0.180  Sum_probs=69.6

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ...++||.|+|| |.+|..++..|+..|+  +|+++++++....... ........++..+  .++ +.++++|+||.++
T Consensus        11 ~~~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~-dl~~~~~~~i~~t--~d~-~~l~~aD~Vi~aa   85 (303)
T 2i6t_A           11 NKTVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATM-DLEIFNLPNVEIS--KDL-SASAHSKVVIFTV   85 (303)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHH-HHHHHTCTTEEEE--SCG-GGGTTCSEEEECC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHH-HHhhhcCCCeEEe--CCH-HHHCCCCEEEEcC
Confidence            334579999995 9999999999999898  9999999874111100 0000001123332  234 6688999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEE
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  141 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  141 (328)
                      +..  ..  .....+....|..-.+.+++.+.+.  ....++.+
T Consensus        86 g~~--~p--G~tR~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv  123 (303)
T 2i6t_A           86 NSL--GS--SQSYLDVVQSNVDMFRALVPALGHY--SQHSVLLV  123 (303)
T ss_dssp             CC--------CCHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEE
T ss_pred             CCC--CC--CCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEE
Confidence            873  22  2345667788888889999988883  33444433

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.39  E-value=0.00026  Score=59.31  Aligned_cols=77  Identities=12%  Similarity=0.095  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc---c------ccCc--e-----eecCChhhHh
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT---R------FFPG--V-----MIAEEPQWRD   85 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~------~~~~--~-----d~~~~~~~~~   85 (328)
                      .+++|.|+| +|.+|+.++..|++.|++|++++|++............   .      ....  .     .+.-.+++.+
T Consensus         3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            357999998 59999999999999999999999987654332211000   0      0000  0     0112345667


Q ss_pred             hcCCCcEEEECCCC
Q 020254           86 CIQGSTAVVNLAGT   99 (328)
Q Consensus        86 ~~~~~d~vi~~a~~   99 (328)
                      +++++|+||.+...
T Consensus        82 ~~~~aDlVi~av~~   95 (283)
T 4e12_A           82 AVKDADLVIEAVPE   95 (283)
T ss_dssp             HTTTCSEEEECCCS
T ss_pred             HhccCCEEEEeccC
Confidence            78899999999753

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.39  E-value=0.00011  Score=63.85  Aligned_cols=75  Identities=9%  Similarity=0.135  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      +++|+|+|+ |.+|+.+++.|...|.+|++++|++.+..........  ...+...+.+++.+.+.++|+||++++..
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS--RVELLYSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc--eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence            479999998 9999999999999999999999987665443221100  11122224456777778999999998764

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=97.38  E-value=0.00015  Score=65.43  Aligned_cols=78  Identities=17%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCce----------eecCChhhHhhcCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~   89 (328)
                      ++|+|.|+| .|++|..++..|.+.  |++|++++|++.+...+...........+          .+.-..++.+.+++
T Consensus         8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~   86 (481)
T 2o3j_A            8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE   86 (481)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence            467999999 699999999999998  79999999988766554432110000000          01111233455667


Q ss_pred             CcEEEECCCCC
Q 020254           90 STAVVNLAGTP  100 (328)
Q Consensus        90 ~d~vi~~a~~~  100 (328)
                      +|+||-+...+
T Consensus        87 aDvvii~Vptp   97 (481)
T 2o3j_A           87 ADLIFISVNTP   97 (481)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEecCCc
Confidence            99999997653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.38  E-value=0.00034  Score=59.47  Aligned_cols=69  Identities=12%  Similarity=0.057  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHh-hcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~   98 (328)
                      ++|+|.|+| .|.+|..+++.|.+.|+  +|++++|++.........+.      ++- -.++..+ +++++|+||.+..
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~------~~~-~~~~~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------IDE-GTTSIAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------CSE-EESCTTGGGGGCCSEEEECSC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC------cch-hcCCHHHHhhccCCEEEEeCC
Confidence            347999999 79999999999999999  99999998765443322211      110 0123445 6788999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.38  E-value=7.3e-05  Score=64.03  Aligned_cols=75  Identities=15%  Similarity=0.052  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~   96 (328)
                      ...+|||+||+|.+|...++.+...|.+|+++++++.+.......+.   ...+|..+.+..+   +..  .++|+||++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---WETIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998765543332211   1123444443332   222  269999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      +|.
T Consensus       217 ~g~  219 (325)
T 3jyn_A          217 VGQ  219 (325)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            873

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.37  E-value=0.00016  Score=65.11  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=51.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccc-------c-----CceeecCChhhHhh
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRF-------F-----PGVMIAEEPQWRDC   86 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~-------~-----~~~d~~~~~~~~~~   86 (328)
                      .+||+|.|+| +|++|..++..|++.  |++|++++|++.+...+........       .     .++..  ..++.++
T Consensus         3 ~~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~--t~~~~e~   79 (467)
T 2q3e_A            3 FEIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF--STNIDDA   79 (467)
T ss_dssp             CCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE--ESCHHHH
T ss_pred             CCccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE--ECCHHHH
Confidence            3457999999 799999999999998  8999999998776554432110000       0     01111  2234556


Q ss_pred             cCCCcEEEECCCC
Q 020254           87 IQGSTAVVNLAGT   99 (328)
Q Consensus        87 ~~~~d~vi~~a~~   99 (328)
                      ++++|+||-+...
T Consensus        80 ~~~aDvViiaVpt   92 (467)
T 2q3e_A           80 IKEADLVFISVNT   92 (467)
T ss_dssp             HHHCSEEEECCCC
T ss_pred             HhcCCEEEEEcCC
Confidence            6789999999764

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.37  E-value=0.0019  Score=55.78  Aligned_cols=69  Identities=19%  Similarity=0.231  Sum_probs=41.5

Q ss_pred             CeEEEEcCCchhHHHHHH-HHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQ-RLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+||||++|+.|++ .|.++.+   ++..++.+. ..........    ....+.+.++.+ .+.++|+||.|++
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~----~~~~~~~~~~~~-~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGK----DAGMLHDAFDIE-SLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSS----CCCBCEETTCHH-HHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCC----CceEEEecCChh-HhccCCEEEECCC
Confidence            689999999999999999 6666653   666665433 2222111100    011222222222 2478999999986

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.36  E-value=0.00027  Score=59.51  Aligned_cols=66  Identities=20%  Similarity=0.210  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+||-++| .|..|..+++.|++.||+|++.+|++.+...+...+       ...  .++..++++++|+||-+..
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-------~~~--~~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG-------ATV--VENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT-------CEE--CSSGGGGCCTTCEEEECCS
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------CeE--eCCHHHHHhcCCceeeecc
Confidence            35899999 899999999999999999999999998876655432       122  2345677788999988854

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.35  E-value=9.5e-05  Score=62.57  Aligned_cols=77  Identities=18%  Similarity=0.204  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecC---CCcccccCCCCCccc---cCceeecCChhhHhhcCCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS---RSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+   ..+...+........   ...+++.+.+++.+.+.++|+||
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII  231 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT  231 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence            4579999996 8999999999999997 89999998   333332221100000   01123334455677788999999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      ++...
T Consensus       232 NaTp~  236 (315)
T 3tnl_A          232 NATGV  236 (315)
T ss_dssp             ECSST
T ss_pred             ECccC
Confidence            99865

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.35  E-value=8.7e-05  Score=61.78  Aligned_cols=74  Identities=15%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+|+ |.+|++++..|++.|++|++++|+..+...+......  ...++..+.+++.+  .++|+||++++..
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~--~~~~~~~~~~~~~~--~~~DivIn~t~~~  191 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP--YGNIQAVSMDSIPL--QTYDLVINATSAG  191 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGGGCCC--SCCSEEEECCCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc--cCCeEEeeHHHhcc--CCCCEEEECCCCC
Confidence            4579999997 8899999999999999999999997665444321000  00123333222211  3799999999863

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.35  E-value=8.4e-05  Score=61.42  Aligned_cols=68  Identities=15%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||+|.|+| +|.+|+.+++.|.+.|++|.+++|++.+.......     + ++.  ...++.++++++|+||.+..
T Consensus         2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-----~-g~~--~~~~~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ-----L-ALP--YAMSHQDLIDQVDLVILGIK   69 (259)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH-----H-TCC--BCSSHHHHHHTCSEEEECSC
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH-----c-CCE--eeCCHHHHHhcCCEEEEEeC
Confidence            357999999 79999999999999999999999987654433211     0 111  12345566678999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.34  E-value=0.00015  Score=62.58  Aligned_cols=75  Identities=17%  Similarity=0.182  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~   96 (328)
                      ...+|||+||+|.+|...++.+...|.+|+++++++.+.......+.   -..+|..+.+..+   +..  .++|+||++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---AYVIDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---cEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            35699999999999999999999899999999998876544432211   1123444433322   222  269999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      +|.
T Consensus       221 ~g~  223 (340)
T 3gms_A          221 IGG  223 (340)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            874

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.32  E-value=9.5e-05  Score=62.09  Aligned_cols=74  Identities=20%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc----cccCceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT----RFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ..++++|+|+ |.+|++++..|++.| +|++++|+..+...+......    .....+|+.+   +.+.+.++|+||+++
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            3578999997 599999999999999 999999987654433211000    0001245544   245567899999999


Q ss_pred             CCC
Q 020254           98 GTP  100 (328)
Q Consensus        98 ~~~  100 (328)
                      +..
T Consensus       202 g~~  204 (287)
T 1nvt_A          202 PIG  204 (287)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            864

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.32  E-value=0.0002  Score=62.11  Aligned_cols=75  Identities=12%  Similarity=0.075  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc------eee-cCChhhHhhcCCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG------VMI-AEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~d~-~~~~~~~~~~~~~d~vi~   95 (328)
                      +|+|.|+| .|.+|..++..|.+.|++|++++|++............ ....      ..+ ...+++.+++.++|+||.
T Consensus         4 ~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~   81 (359)
T 1bg6_A            4 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI-IAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   81 (359)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE-EEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             cCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCe-EEeccccccccccceecCCHHHHHhcCCEEEE
Confidence            47999999 59999999999999999999999987654333211000 0000      001 012345566778999999


Q ss_pred             CCCC
Q 020254           96 LAGT   99 (328)
Q Consensus        96 ~a~~   99 (328)
                      +...
T Consensus        82 ~v~~   85 (359)
T 1bg6_A           82 VVPA   85 (359)
T ss_dssp             CSCG
T ss_pred             eCCc
Confidence            8753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.30  E-value=0.00038  Score=60.58  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++.+..... ..+.   ..-+|..+.+.+.++..++|+||++++.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA---DSFLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC---SEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---ceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence            4468999996 99999999999999999999999877654433 2221   1124544555666666789999999885

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.30  E-value=0.00022  Score=59.88  Aligned_cols=64  Identities=16%  Similarity=0.030  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||+|.|+| .|.+|..+++.|.+ |++|++++|++.+.......       ++...+   ..+++.++|+||.+..
T Consensus         1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-------g~~~~~---~~~~~~~~D~vi~~v~   64 (289)
T 2cvz_A            1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-------FGSEAV---PLERVAEARVIFTCLP   64 (289)
T ss_dssp             -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-------HCCEEC---CGGGGGGCSEEEECCS
T ss_pred             CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-------CCcccC---HHHHHhCCCEEEEeCC
Confidence            46899999 69999999999999 99999999987654433221       111122   3455667899998864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.30  E-value=0.00016  Score=62.50  Aligned_cols=75  Identities=20%  Similarity=0.139  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChh---hHhhc--CCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~--~~~d~vi~   95 (328)
                      ...+|||+||+|.+|..+++.+... |.+|+++++++.+.......+.   ...+|..+.+.   +.+..  .++|+||+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  246 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVID  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---CEEecCCCccHHHHHHHHhcCCCceEEEE
Confidence            4568999999999999999999998 9999999988765443322111   11234444433   34444  36999999


Q ss_pred             CCCC
Q 020254           96 LAGT   99 (328)
Q Consensus        96 ~a~~   99 (328)
                      ++|.
T Consensus       247 ~~g~  250 (347)
T 1jvb_A          247 LNNS  250 (347)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9984

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.29  E-value=0.00055  Score=61.47  Aligned_cols=74  Identities=14%  Similarity=0.228  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCcee-ecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+|+|.|+| .|.+|..++..|.+.||+|++.+|++.+...+......  ..++. ..+.+++.+.++++|+|+.+..
T Consensus         3 ~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~--g~~i~~~~s~~e~v~~l~~aDvVil~Vp   77 (484)
T 4gwg_A            3 AQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVVGAQSLKEMVSKLKKPRRIILLVK   77 (484)
T ss_dssp             CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT--TSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccC--CCceeccCCHHHHHhhccCCCEEEEecC
Confidence            457899999 79999999999999999999999998776554322100  00111 1233333344456888888754

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.28  E-value=0.0001  Score=62.58  Aligned_cols=68  Identities=22%  Similarity=0.255  Sum_probs=51.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .++|+|.|+| .|.+|..+++.|++.|++|++.+|++.+...+....       +.  ..++..++++++|+||-+..
T Consensus         7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~--~~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAG-------AH--LCESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT-------CE--ECSSHHHHHHHSSEEEECCS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC-------Ce--ecCCHHHHHhcCCEEEEEeC
Confidence            3467999998 799999999999999999999999887655433211       11  23445666777999998864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.27  E-value=0.00019  Score=62.40  Aligned_cols=74  Identities=20%  Similarity=0.124  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhc-CCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI-QGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~-~~~d~vi~~a   97 (328)
                      ...+|||+||+|.+|..+++.+...|.+|+++++++.+.......+.   ...+|..+.+   .+.+.. .++|+||+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~g~D~vid~~  239 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC---DRPINYKTEPVGTVLKQEYPEGVDVVYESV  239 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC---cEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence            35689999999999999999999999999999998655443322211   1113333322   122222 3689999998


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      +
T Consensus       240 g  240 (362)
T 2c0c_A          240 G  240 (362)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.27  E-value=0.0012  Score=56.51  Aligned_cols=68  Identities=19%  Similarity=0.290  Sum_probs=42.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|.|.||||++|+.|++.|.++.|   ++..++.+.+......-.     .....+.+.+  ...+.++|+||.|++
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-----~~~~~~~~~~--~~~~~~~Dvvf~a~~   72 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-----GQEIEVEDAE--TADPSGLDIALFSAG   72 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-----TEEEEEEETT--TSCCTTCSEEEECSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-----CCceEEEeCC--HHHhccCCEEEECCC
Confidence            6899999999999999999988743   466665443322221100     0012222222  133478999999986

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.27  E-value=0.00015  Score=61.34  Aligned_cols=67  Identities=9%  Similarity=0.137  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+|+|.|+| .|.+|..+++.|.+.|++|++++|++..........       +..  .++..++++++|+||.+..
T Consensus         3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~D~vi~~vp   69 (301)
T 3cky_A            3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-------AQA--CENNQKVAAASDIIFTSLP   69 (301)
T ss_dssp             -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------Cee--cCCHHHHHhCCCEEEEECC
Confidence            457999999 699999999999999999999999876554433221       122  2234555667888888863

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.27  E-value=0.00014  Score=59.64  Aligned_cols=70  Identities=30%  Similarity=0.420  Sum_probs=48.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc--c------------cccCCCCCccccCceeecCChhhHh
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--A------------ELIFPGKKTRFFPGVMIAEEPQWRD   85 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~------------~~~~~~~~~~~~~~~d~~~~~~~~~   85 (328)
                      ...+|+|.|+| +|.+|.++++.|++.||+|++.+|++.+  .            ......     ....   ...+..+
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~e   86 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-----HPHV---HLAAFAD   86 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-----STTC---EEEEHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-----cCce---eccCHHH
Confidence            34568999998 8999999999999999999999998765  1            111110     0011   1234566


Q ss_pred             hcCCCcEEEECCC
Q 020254           86 CIQGSTAVVNLAG   98 (328)
Q Consensus        86 ~~~~~d~vi~~a~   98 (328)
                      +++++|+||.+..
T Consensus        87 ~~~~aDvVilavp   99 (245)
T 3dtt_A           87 VAAGAELVVNATE   99 (245)
T ss_dssp             HHHHCSEEEECSC
T ss_pred             HHhcCCEEEEccC
Confidence            6778999999864

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.26  E-value=8.1e-05  Score=61.07  Aligned_cols=66  Identities=9%  Similarity=0.122  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC----eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +|+|.|+| +|.+|..+++.|.+.|+    +|++.+|++.+.......      .++..  .++..++++++|+||-+.
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~------~g~~~--~~~~~e~~~~aDvVilav   71 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK------YGLTT--TTDNNEVAKNADILILSI   71 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH------HCCEE--CSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH------hCCEE--eCChHHHHHhCCEEEEEe
Confidence            57999999 79999999999999998    999999987765443221      01222  234456667799999986

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.25  E-value=0.00038  Score=57.04  Aligned_cols=66  Identities=20%  Similarity=0.219  Sum_probs=52.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +|+|+|+ |..|++++..|++.|. +|++++|+..+...+...     +   .....+++.+.+.++|+||++...
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~-----~---~~~~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP-----V---KIFSLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS-----C---EEEEGGGHHHHHHTCSEEEECSST
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-----c---ccCCHHHHHhhhcCCCEEEECCCC
Confidence            8999995 9999999999999997 999999998776665443     1   112345566777899999998754

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.25  E-value=0.00037  Score=59.01  Aligned_cols=102  Identities=15%  Similarity=0.194  Sum_probs=67.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ||.|+|| |.+|..++..|+..|. +|+++++++.+...........   ......+....+. ++++++|+||.+++.+
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~   78 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG   78 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence            5899997 9999999999988787 7999999876543211100000   0001222221233 5789999999999875


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      ...   .....+....|+.-.+.+++.+.+.
T Consensus        79 ~k~---G~~r~dl~~~n~~i~~~i~~~i~~~  106 (308)
T 2d4a_B           79 RKP---GMTREQLLEANANTMADLAEKIKAY  106 (308)
T ss_dssp             CCS---SCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC---CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            322   2234566778999999999998873

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.24  E-value=0.00038  Score=57.98  Aligned_cols=70  Identities=17%  Similarity=0.218  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+| +|.+|++++..|.+.|++|++++|++.+...+....      +++..+  ++.+.++++|+||++....
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~--~~~~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVN--SPEEVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECS--CGGGTGGGCSEEEECSSTT
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeeh--hHHhhhcCCCEEEEeCCCC
Confidence            347999999 599999999999999999999999876655544321      234432  4566778899999998753

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.24  E-value=0.0029  Score=54.72  Aligned_cols=70  Identities=14%  Similarity=0.220  Sum_probs=41.8

Q ss_pred             CCeEEEEcCCchhHHHHHH-HHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQ-RLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +++|.|+||||++|+.|++ .|.++.+   ++..++.+ +..........    ....+.+.++.+ .+.++|+||.|++
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~----~~~~v~~~~~~~-~~~~vDvvf~a~~   77 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAK----NETTLKDATSID-DLKKCDVIITCQG   77 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCC----SCCBCEETTCHH-HHHTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCC----CceEEEeCCChh-HhcCCCEEEECCC
Confidence            4799999999999999999 6666653   66666544 22222111110    011222222222 2468999999986

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.22  E-value=0.00014  Score=61.47  Aligned_cols=66  Identities=12%  Similarity=0.215  Sum_probs=48.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|+|.|+| +|.+|..+++.|.+.|++|++++|++..........       +..  .++..++++++|+||.+..
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AET--ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------Cee--cCCHHHHHhCCCEEEEECC
Confidence            47999999 799999999999999999999999876544432211       121  2234555667899998864

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=97.22  E-value=0.0021  Score=53.73  Aligned_cols=72  Identities=15%  Similarity=0.139  Sum_probs=47.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|++.....+............++.. +. .+.++++|+||-+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~d~vi~~v~   72 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA-ND-PDFLATSDLLLVTLK   72 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEE-SC-HHHHHTCSEEEECSC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeee-cC-ccccCCCCEEEEEec
Confidence            58999995 99999999999999999999999886554432111000000011111 11 245567999999865

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.21  E-value=0.00032  Score=58.12  Aligned_cols=72  Identities=18%  Similarity=0.122  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+..+...+.....   ...+...+.+++..  .++|+||++...
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~---~~~~~~~~~~~l~~--~~~DivInaTp~  191 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD---HSRLRISRYEALEG--QSFDIVVNATSA  191 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC---CTTEEEECSGGGTT--CCCSEEEECSSG
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---cCCeeEeeHHHhcc--cCCCEEEECCCC
Confidence            4579999996 8899999999999995 99999998876554432211   01134444444433  689999999764

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.21  E-value=0.00042  Score=58.54  Aligned_cols=70  Identities=19%  Similarity=0.224  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+| .|.+|+.+++.|...|.+|++++|++.+.......       +++..+.++++++++++|+|+.+...
T Consensus       156 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          156 HGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEM-------GLVPFHTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-------CCeEEchhhHHHHhhCCCEEEECCCh
Confidence            457999999 59999999999999999999999987543322111       12333445678888999999999764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.20  E-value=0.00029  Score=60.77  Aligned_cols=74  Identities=23%  Similarity=0.203  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhcC--CCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vi~~   96 (328)
                      ...+|||+||+|.+|...++.+...|.+|+++++++.+.......+.   ..-+|.. .+   .+.+...  ++|+||++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA---DIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---cEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            35689999999999999999999999999999998776543332211   1112332 21   2223332  69999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      +|.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            884

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.20  E-value=0.00021  Score=63.08  Aligned_cols=71  Identities=24%  Similarity=0.258  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+|+ |.+|+.+++.|...|. +|++++|++.+...+...     + +.+..+.+++.+.+.++|+||.+.+.
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~-----~-g~~~~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD-----L-GGEAVRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH-----H-TCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-----c-CCceecHHhHHHHhcCCCEEEEccCC
Confidence            4679999996 9999999999999998 999999987654322211     1 13344455677778899999999875

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.19  E-value=0.0009  Score=59.16  Aligned_cols=79  Identities=20%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCChhhHhhcCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQG   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~   89 (328)
                      ..|.+|.|+| .||+|..++..|.+.||+|++++.++.+...+........-+.           ..+.-..+..+++..
T Consensus        19 ~~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~   97 (444)
T 3vtf_A           19 SHMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA   97 (444)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence            3467999998 8999999999999999999999999877555433211000000           011112344566778


Q ss_pred             CcEEEECCCCC
Q 020254           90 STAVVNLAGTP  100 (328)
Q Consensus        90 ~d~vi~~a~~~  100 (328)
                      +|++|-|.+.+
T Consensus        98 ad~~~I~VpTP  108 (444)
T 3vtf_A           98 TDATFIAVGTP  108 (444)
T ss_dssp             SSEEEECCCCC
T ss_pred             CCceEEEecCC
Confidence            99999998754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.17  E-value=0.001  Score=55.82  Aligned_cols=37  Identities=35%  Similarity=0.324  Sum_probs=31.5

Q ss_pred             CCCe-EEEE-cCC-----------------chhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           22 SQMT-VSVT-GAT-----------------GFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~-ilI~-Gat-----------------G~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      ..++ |||| |||                 |..|.++++.++++|++|+.+.++.+
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            3455 8888 566                 99999999999999999999998654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.16  E-value=0.00051  Score=57.81  Aligned_cols=69  Identities=17%  Similarity=0.164  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++|+|+| .|.+|+.+++.|...|.+|++++|++.+.......       +++..+.++++++++++|+|+.+..
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-------GMEPFHISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TSEEEEGGGHHHHTTTCSEEEECCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-------CCeecChhhHHHHhcCCCEEEECCC
Confidence            457999999 69999999999999999999999987543322111       1233344667888899999999975

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.15  E-value=0.00051  Score=58.95  Aligned_cols=74  Identities=24%  Similarity=0.346  Sum_probs=51.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEec--CCCcccccCCCCCcccc----CceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR--SRSKAELIFPGKKTRFF----PGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |+|.|+| .|.+|..++..|.+.||+|++++|  ++.....+.........    ..+...++++..++++++|+||.+.
T Consensus         1 m~I~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            5899999 599999999999999999999999  66554433332110000    1123444446667778999999986


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.13  E-value=0.00044  Score=58.22  Aligned_cols=66  Identities=17%  Similarity=0.234  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||+|.|+| +|.+|+.+++.|.+.|++|++++ ++..........       +.  ..++..++++++|+||.+..
T Consensus         2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g-------~~--~~~~~~~~~~~~D~vi~~vp   67 (295)
T 1yb4_A            2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG-------AV--NVETARQVTEFADIIFIMVP   67 (295)
T ss_dssp             --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT-------CB--CCSSHHHHHHTCSEEEECCS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC-------Cc--ccCCHHHHHhcCCEEEEECC
Confidence            347999999 79999999999999999999888 665544333221       11  12345566677899988864

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.13  E-value=0.00057  Score=56.32  Aligned_cols=66  Identities=21%  Similarity=0.217  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      .++++|+|+ |..|++++..|.+.|.+|+++.|+..+...+. .     +. +.....+++    .++|+||++....
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~-----~~-~~~~~~~~l----~~~DiVInaTp~G  183 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-R-----LG-CDCFMEPPK----SAFDLIINATSAS  183 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-H-----HT-CEEESSCCS----SCCSEEEECCTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H-----CC-CeEecHHHh----ccCCEEEEcccCC
Confidence            579999995 99999999999999999999999988766554 2     11 223233332    2799999997653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.12  E-value=0.00059  Score=56.75  Aligned_cols=67  Identities=19%  Similarity=0.301  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+|+ |..|++++..|.+.|. +|+++.|+..+...+...     +   .....+++.+ + ++|+||++...
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~-----~---~~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE-----F---KVISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT-----S---EEEEHHHHTT-C-CCSEEEECSST
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-----c---CcccHHHHHh-c-cCCEEEECCcc
Confidence            3579999995 8899999999999997 999999998776665543     2   2223344545 5 89999999864

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.12  E-value=0.0011  Score=55.33  Aligned_cols=66  Identities=20%  Similarity=0.225  Sum_probs=47.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+|.|+| +|.+|+.+++.|.+.|++|++++|++..........    .. ...  .+++.++ .++|+||.+..
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~-~~~--~~~~~~~-~~~D~vi~av~   66 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ----LV-DEA--GQDLSLL-QTAKIIFLCTP   66 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----SC-SEE--ESCGGGG-TTCSEEEECSC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC----CC-ccc--cCCHHHh-CCCCEEEEECC
Confidence            5899999 799999999999999999999999876544432211    10 011  1234455 78999999864

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.11  E-value=0.00035  Score=58.39  Aligned_cols=66  Identities=23%  Similarity=0.260  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +|+|.|+|+ |.+|..+++.|++.|+   +|++.+|++.+...+....      ++..  ..+..++++++|+||-+.
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------gi~~--~~~~~~~~~~aDvVilav   71 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------GVHT--TQDNRQGALNADVVVLAV   71 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------CCEE--ESCHHHHHSSCSEEEECS
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------CCEE--eCChHHHHhcCCeEEEEe
Confidence            478999995 9999999999999998   9999999987765543321      1222  234456778899999986

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.11  E-value=0.00016  Score=64.88  Aligned_cols=74  Identities=14%  Similarity=0.244  Sum_probs=56.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      .|||+|.|+ |.+|++|++.|.+.||+|+++++++.....+...... .....|-++++.++++ ++++|.++-+.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDL-RVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSC-EEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCc-EEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            479999995 9999999999999999999999998776544322110 1234577788888766 468999987754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.10  E-value=0.0002  Score=60.52  Aligned_cols=78  Identities=12%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC---cccccCCCCCccccCceeecCChh---hHhhcCCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQ---WRDCIQGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~d~vi   94 (328)
                      ..++++|+|+ |..|++++..|.+.|. +|+++.|+.+   +...+...........+...+.++   +.+.+.++|+||
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII  225 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT  225 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence            4579999996 9999999999999997 8999999943   333322110000001122223333   356677899999


Q ss_pred             ECCCCC
Q 020254           95 NLAGTP  100 (328)
Q Consensus        95 ~~a~~~  100 (328)
                      ++....
T Consensus       226 NaTp~G  231 (312)
T 3t4e_A          226 NGTKVG  231 (312)
T ss_dssp             ECSSTT
T ss_pred             ECCcCC
Confidence            998753

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.10  E-value=0.00042  Score=61.47  Aligned_cols=70  Identities=16%  Similarity=0.129  Sum_probs=52.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      .++++|+|+| .|.+|+.+++.+.+.|++|++++..+..........    ....++.|.+.+.++++++|+|+.
T Consensus        33 ~~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~----~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADR----HLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSE----EECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCE----EEECCcCCHHHHHHHHhcCCEEEE
Confidence            3457999999 599999999999999999999987654332221111    223567788888888888999984

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.08  E-value=0.00035  Score=59.50  Aligned_cols=66  Identities=17%  Similarity=0.287  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|+|.|+| .|.+|+.+++.|.+.|++|++++|++..........       +...  ++..++++++|+||.+..
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~--~~~~~~~~~~DvVi~av~   95 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEG-------ARLG--RTPAEVVSTCDITFACVS   95 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTT-------CEEC--SCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcC-------CEEc--CCHHHHHhcCCEEEEeCC
Confidence            47899999 699999999999999999999999876654432211       1221  234455667899988864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.08  E-value=0.00019  Score=65.56  Aligned_cols=71  Identities=17%  Similarity=0.164  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHh-hcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~~  100 (328)
                      .++++|+|| |.+|++++..|++.|.+|++++|+..+...+.....   ....++   +++.+ ....+|++||+++..
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~~~---~dl~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKALSL---TDLDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CEET---TTTTTC--CCSEEEEECSSTT
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CceeeH---HHhhhccccCceEEEECCCCC
Confidence            468999998 799999999999999999999998765444322110   001122   22333 224589999999863

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.07  E-value=0.00073  Score=59.04  Aligned_cols=69  Identities=19%  Similarity=0.144  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ++++|+|+| .|.+|+.+++.+.+.|++|++++..+.........    .....++.|.+.+.++++++|+|..
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad----~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAH----EFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSS----EEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCC----EEEECCCCCHHHHHHHHHhCCccee
Confidence            467999999 59999999999999999999998876532221111    1233567788888888888998855

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.06  E-value=0.00038  Score=58.67  Aligned_cols=67  Identities=16%  Similarity=0.280  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .|+||-++| .|..|..+++.|++.||+|++.+|++.+...+...+       ..  -.++..++.+++|+||-|..
T Consensus         2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G-------a~--~a~s~~e~~~~~dvv~~~l~   68 (300)
T 3obb_A            2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------AS--AARSARDAVQGADVVISMLP   68 (300)
T ss_dssp             -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CE--ECSSHHHHHTTCSEEEECCS
T ss_pred             CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC-------CE--EcCCHHHHHhcCCceeecCC
Confidence            467999999 899999999999999999999999987766554322       11  22345566667777777753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.06  E-value=0.00039  Score=60.11  Aligned_cols=73  Identities=5%  Similarity=-0.008  Sum_probs=50.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~a~   98 (328)
                      .+|+|+||+|.+|...++.+...|.+|+++++++.+.......+.   ..-+|..+.+..+   +..  .++|+||+++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA---AHVLNEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC---SEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            689999999999999999999999999999998776544332211   1123443333222   222  27999999987


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus       243 ~  243 (349)
T 3pi7_A          243 G  243 (349)
T ss_dssp             H
T ss_pred             C
Confidence            3

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.06  E-value=0.0012  Score=55.68  Aligned_cols=80  Identities=15%  Similarity=0.055  Sum_probs=57.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceee--cCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ...++++|+|++..+|+.+++.|+..|.+|++++|+....................+  ++.+++.+.+.++|+||.+++
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg  254 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVP  254 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCC
Confidence            356899999988889999999999999999999988554443333221000111111  233788999999999999988


Q ss_pred             CC
Q 020254           99 TP  100 (328)
Q Consensus        99 ~~  100 (328)
                      .+
T Consensus       255 ~p  256 (320)
T 1edz_A          255 SE  256 (320)
T ss_dssp             CT
T ss_pred             CC
Confidence            64

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.03  E-value=0.00065  Score=58.96  Aligned_cols=74  Identities=20%  Similarity=0.079  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++.+.......+.   ..-+|..+. +..+++..++|+||++++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---CEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence            3468999999 999999999998889999999998876544332211   111344444 3333333589999999875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.03  E-value=0.00039  Score=57.91  Aligned_cols=72  Identities=21%  Similarity=0.207  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+..+...+......  ...+...+.++   +..++|+||++...
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~--~~~~~~~~~~~---l~~~aDiIInaTp~  197 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA--YGEVKAQAFEQ---LKQSYDVIINSTSA  197 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGGG---CCSCEEEEEECSCC
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc--cCCeeEeeHHH---hcCCCCEEEEcCcC
Confidence            4579999996 8899999999999995 999999987765444321100  00123333332   22689999999865

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.03  E-value=0.0035  Score=46.52  Aligned_cols=61  Identities=15%  Similarity=0.046  Sum_probs=42.6

Q ss_pred             CCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +++|+|+|++   |.+|..+++.|++.|++|+.+.  +.. .+         ..++..  ..++.++...+|.++-+.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn--p~~-~~---------i~G~~~--y~sl~~l~~~vDlvvi~v   85 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN--PKY-EE---------VLGRKC--YPSVLDIPDKIEVVDLFV   85 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC--TTC-SE---------ETTEEC--BSSGGGCSSCCSEEEECS
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC--CCC-Ce---------ECCeec--cCCHHHcCCCCCEEEEEe
Confidence            6799999998   8999999999999999866553  332 11         111222  233455556799999885

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.03  E-value=0.0024  Score=52.24  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      .++|+|+| .|.+|+++++.|...|. +|++++++.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            46899999 59999999999999996 899999886

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.02  E-value=0.0016  Score=51.77  Aligned_cols=49  Identities=14%  Similarity=0.262  Sum_probs=40.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+|+|.|+| +|.+|+.++..|.+.|++|++++|++.                           .++++|+||.+..
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------------------------~~~~aD~vi~av~   66 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------------------------ATTLGEIVIMAVP   66 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------------------------CSSCCSEEEECSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------------------------HhccCCEEEEcCC
Confidence            467999999 799999999999999999999988653                           4567899998853

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.01  E-value=0.00057  Score=58.80  Aligned_cols=74  Identities=23%  Similarity=0.083  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~vi~~a~   98 (328)
                      ...+|||+|+ |.+|..+++.+...|.+|++++|++.+.......+.   ..-+|..+.+   .+.+...++|+||++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC---CEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            3568999999 779999999999999999999998765443332211   1113443332   22222257999999987


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus       240 ~  240 (339)
T 1rjw_A          240 S  240 (339)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.00  E-value=0.0013  Score=57.14  Aligned_cols=32  Identities=31%  Similarity=0.493  Sum_probs=26.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVL   53 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~   53 (328)
                      +++||.|.||||++|+.|++.|.+.. .++..+
T Consensus        18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l   50 (381)
T 3hsk_A           18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHAL   50 (381)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred             CccEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence            34689999999999999999888876 467555

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.99  E-value=0.00087  Score=59.05  Aligned_cols=74  Identities=20%  Similarity=0.235  Sum_probs=49.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccC---------ceeecCChhhHhhcCCCcEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP---------GVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      |+|.|+| .|++|..++..|.+ ||+|++++|++.+...+........-.         ...+.-..+..+.++++|+||
T Consensus         1 MkI~VIG-~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvi   78 (402)
T 1dlj_A            1 MKIAVAG-SGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVI   78 (402)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEE
Confidence            5899999 59999999999999 999999999877655543322100000         001111223445566799999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      -+...
T Consensus        79 iavpt   83 (402)
T 1dlj_A           79 IATPT   83 (402)
T ss_dssp             ECCCC
T ss_pred             EecCC
Confidence            99764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.99  E-value=0.0013  Score=57.39  Aligned_cols=74  Identities=15%  Similarity=0.100  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc--CCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~a~~   99 (328)
                      ...+|||+||+|.+|...++.+...|.+|+++++ +.+.......+.   ..-+|..+.+..+++.  .++|+||+++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGA---DDVIDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTC---SEEEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCC---CEEEECCchHHHHHHhhcCCCCEEEECCCC
Confidence            4468999999999999999999999999998874 333222222111   1113443433233322  479999999884

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.97  E-value=0.0012  Score=56.39  Aligned_cols=26  Identities=46%  Similarity=0.744  Sum_probs=23.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCe
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQ   49 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~   49 (328)
                      |||.|.||+|++|+.+++.|.+++|.
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~   26 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFP   26 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC
Confidence            58999999999999999999977664

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.93  E-value=0.002  Score=54.56  Aligned_cols=66  Identities=21%  Similarity=0.365  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..|+|.|+| .|-||+.+++.|...|++|++.+|++......           ......++++++++++|+|+.+...
T Consensus       138 ~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----------~~~~~~~~l~ell~~aDiV~l~~Pl  203 (315)
T 3pp8_A          138 EEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV-----------ESYVGREELRAFLNQTRVLINLLPN  203 (315)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC-----------EEEESHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh-----------hhhcccCCHHHHHhhCCEEEEecCC
Confidence            457999999 79999999999999999999999987542211           1122236788889999999988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	328
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-20
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-19
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-18
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	5e-18
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-16
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-15
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-15
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-13
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-12
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-12
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-12
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-12
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-10
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-09
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-09
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	8e-07
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	6e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-06
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-05
d2hjsa1	144	c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog	3e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	4e-04
d1mb4a1	147	c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semiald	5e-04
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	6e-04
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-04
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	0.001
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.003

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 86.0 bits (212), Expect = 9e-20
 Identities = 54/270 (20%), Positives = 96/270 (35%), Gaps = 24/270 (8%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRV---------LTRSRSKAELIFPGKKTRF-FP 73
           M + VTG  GFIG   V++L A  +             LT + ++A L       R  F 
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 74  GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 133
              I +       ++G  A+V+ A      R  +      + +     + +   ++    
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 134 GVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLAL 190
                 +V  +    YG+ ++  + ESSP    + Y  ++   +    A      + + +
Sbjct: 121 -----RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175

Query: 191 IRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP 245
            R     G       K+IPLF+  +  GG L   G G     W+H DD    I   L+  
Sbjct: 176 TRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234

Query: 246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRP 275
               + +      +   E+   L + LG  
Sbjct: 235 RAGEIYHIGGGLELTNRELTGILLDSLGAD 264

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 83.0 bits (203), Expect = 4e-19
 Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 13/259 (5%)

Query: 21  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 80
           A+  TV VTGA+G  G+ + ++L+  + +       RS       G +   F G +   +
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDAD 60

Query: 81  PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
                  QG  A+V L       +   +  K  +   I    +  + ++   +  +    
Sbjct: 61  SINPAF-QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 119

Query: 141 VSATALGYYGTSETEVFDESSPSGNDYL-AEVCREWEGTALKVNKDVRLALIRIGIVLGK 199
             A              +   P         +  + +      +      +IR G +L K
Sbjct: 120 KVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK 179

Query: 200 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG----VINGTA 255
           +GG       +  +  G      Q     +   D+  +  +AL     +     + +   
Sbjct: 180 EGG-------VRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 232

Query: 256 PNPVRLAEMCDHLGNVLGR 274
                  +       V  R
Sbjct: 233 GTSTPTKDFKALFSQVTSR 251

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 3e-18
 Identities = 48/264 (18%), Positives = 92/264 (34%), Gaps = 25/264 (9%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 86
           +TG  GF+G  L  +L  D H+V V+      +   +             +         
Sbjct: 6   ITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG---HENFELINHDVVEPL 62

Query: 87  IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 146
                 + +LA  P           +  ++    T  ++ L      G R  +L+++T+ 
Sbjct: 63  YIEVDQIYHLAS-PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV--GAR--LLLASTS- 116

Query: 147 GYYGTSETEVFDESSPSGNDYL--------AEVCREWEGTALKVNKDVRLALIRIGIVLG 198
             YG  E     E      + +         +   E    A    + V + + RI    G
Sbjct: 117 EVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 176

Query: 199 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 252
            +      +++  F+     G PL   GSG Q  ++ ++ D+VN +   + N +    +N
Sbjct: 177 PRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPVN 235

Query: 253 GTAPNPVRLAEMCDHLGNVLGRPS 276
              P    + E    + N++G  S
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSGS 259

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 81.6 bits (200), Expect = 5e-18
 Identities = 44/296 (14%), Positives = 82/296 (27%), Gaps = 27/296 (9%)

Query: 23  QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKTRFFPGVMIAEE 80
           + T++V GATG  G  L++   A  H VR    S     AE +        F G ++   
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 62

Query: 81  PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 140
           P      +G+        +  G   +          R                 ++  + 
Sbjct: 63  PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGT--------------IQHYIY 108

Query: 141 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKD 200
            S      YG            +  +Y+ ++              V   +          
Sbjct: 109 SSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPST--------FVYAGIYNNNFTSLPY 160

Query: 201 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNP 258
                +++P        P              D+   + +   +    + G         
Sbjct: 161 PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET 220

Query: 259 VRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 313
           +   ++C      L R  +++ VP+  +K  +  G    LE   VV    K   FP
Sbjct: 221 LSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFP 276

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 76.3 bits (187), Expect = 3e-16
 Identities = 46/277 (16%), Positives = 92/277 (33%), Gaps = 36/277 (12%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRV----LTRSRSKAELIFPGKKTRF-FPGVMIA 78
           M + +TG  GFIG  +V+ +  +     V    LT + +   L    +  R+ F    I 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 79  EEPQWRDCIQGS--TAVVNLAGTP-----------------IGTRWSSEIKKEIKESRIR 119
           +  +     +     AV++LA                    +GT    E+ ++   +   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 120 VTSKVVDLINESPE---GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWE 176
                    + S +   G  P       ++     +ET  +  SSP      ++   +  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYS---ASKASSDHL 177

Query: 177 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHL 231
             A +    +   +       G       K+IPL +     G PL   G G Q   W+++
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236

Query: 232 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 268
           +D    ++  ++        N    N  +  ++   +
Sbjct: 237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI 273

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (177), Expect = 1e-15
 Identities = 29/228 (12%), Positives = 61/228 (26%), Gaps = 33/228 (14%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 81
           +   +++ GATG  G   + +     ++V VL R  S+     P         V+ A   
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAA-- 59

Query: 82  QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 141
                + G  AV+ L GT          + ++  + +        +      GV   V  
Sbjct: 60  DVDKTVAGQDAVIVLLGT----------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109

Query: 142 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 201
           ++                 + + +           G             +    +  +  
Sbjct: 110 TSA--FLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVA--------VMPPHIGDQPL 159

Query: 202 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 249
                +              G+     I   D+ + +   L+   Y G
Sbjct: 160 TGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 71.7 bits (174), Expect = 9e-15
 Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 36/283 (12%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVM 76
             V + G TG+IG+R+V    +  H   VL R    + +        F     +      
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-S 62

Query: 77  IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
           + +  +  D ++    V++     + +    E  K ++  +     K             
Sbjct: 63  LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF----------- 111

Query: 137 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIV 196
                         +      D    +          + +         +    +   + 
Sbjct: 112 ------------LPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMF 159

Query: 197 LGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYRG--VIN 252
            G   G+LA++    M      L  G G     W+  DD+     +++ +P      +  
Sbjct: 160 AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI 219

Query: 253 GTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 294
               N +   E+      +  +    + +      A + + ++
Sbjct: 220 RPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 262

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 67.1 bits (162), Expect = 3e-13
 Identities = 36/279 (12%), Positives = 77/279 (27%), Gaps = 29/279 (10%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAE 79
           S+  + + GATG+IGR + +      H   +L R  + +      +    F   G  I  
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 80  EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 139
                                       E +  I ++   V +                 
Sbjct: 62  GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK--------------- 106

Query: 140 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 199
                    +  SE     ++  +     +    + +       + +    +      G 
Sbjct: 107 --------RFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY 158

Query: 200 DGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG--VINGTAP 256
              +LA+             LG G     ++  +DI     +A+ +P      +      
Sbjct: 159 FLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPA 218

Query: 257 NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 294
           N + L E+       + +      VPE  +  ++ +  F
Sbjct: 219 NTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 257

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 65.6 bits (159), Expect = 1e-12
 Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 27/326 (8%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS----------KAELIFPGKKTRFFPG 74
              +TG TG  G  L + L    ++V  + R  S            +      K     G
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 75  VMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG 134
            +       R   +     V   G       S E  +   +     T ++++ I      
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 135 VRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALI 191
            +     ++T+   YG  +     E++P    + Y +A++   W     + +  +     
Sbjct: 123 KKTRFYQASTS-ELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNG 181

Query: 192 RIGIVLGKDGG---ALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALS 243
            +        G      K+       A G      LG+      W H  D V + +  L 
Sbjct: 182 ILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ 241

Query: 244 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL----PVPEFALKAVLGEGAFVVLEG 299
                  +  T      + +  +     LG            +  + +V G  A  V  G
Sbjct: 242 QEQPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 300

Query: 300 QRVVPARAKELGFPFKYRYVKDALKA 325
             ++    +          + D  KA
Sbjct: 301 DVIIAVDPRYFRPAEVETLLGDPTKA 326

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 64.3 bits (155), Expect = 3e-12
 Identities = 35/246 (14%), Positives = 69/246 (28%), Gaps = 19/246 (7%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTR-----SRSKAELIFPGKKTRFFPGVMIAE 79
           +  VTG TG  G  L + L    ++V  L       +R +   +      ++  G M   
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 80  EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 139
               R  I+     V           S               + +++ I +     R   
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 140 LVSATALGYYGTSETEVFDESSPSGND---YLAEVCREWEGTALKVNKDVRLALIRIGIV 196
             ++     +G  + E  DE++P        +A++   W     + +  +  +   +   
Sbjct: 122 ASTSE---MFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 197 LG---KDGGALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 248
                       K+         G      LG+      W    D V  ++  L      
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD 238

Query: 249 GVINGT 254
             +  T
Sbjct: 239 DYVVAT 244

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 63.7 bits (153), Expect = 4e-12
 Identities = 44/334 (13%), Positives = 82/334 (24%), Gaps = 42/334 (12%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 84
            V VTGA GF+   +V++L    ++VR   RS SK   +      ++      A      
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 85  D--CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 142
                                   S    E+    I  T   +     +P   R  +  S
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132

Query: 143 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALK------VNKDVRLALIR---- 192
             +      +   ++ +      + + +     E    K       +K            
Sbjct: 133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMD 192

Query: 193 ----------------IGIVLGKDGGALAKMIPLFMMFAGG--PLGSGQQWFSWIHLDDI 234
                           IG +   +  + +    +  +F G   P  +      ++   DI
Sbjct: 193 ENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDI 252

Query: 235 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF 294
             L    L  P                  +      +         P     A   +   
Sbjct: 253 GLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY--------PSKTFPADFPDQGQ 304

Query: 295 VVLEGQRVVPARA-KELGFPFKY---RYVKDALK 324
            + +          K LG P        +KD + 
Sbjct: 305 DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 63.4 bits (153), Expect = 5e-12
 Identities = 40/276 (14%), Positives = 73/276 (26%), Gaps = 25/276 (9%)

Query: 20  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKA-----ELIFPGKKTRF 71
            A      +TG  GFIG  L++ L   + +V           +       L+   + + F
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 72  FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 131
                        +        V           S         + I     ++    + 
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD- 131

Query: 132 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDYLAEVCR-EWEGTALKVNKDVRL 188
               +      A +   YG        E +     + Y       E              
Sbjct: 132 ---AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFST 188

Query: 189 ALIRIGIVLGKDG---GALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYE 240
             +R   V G+     GA A +IP +   M  G  +   G G+    + ++++ V     
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL 248

Query: 241 ALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGR 274
           A +        V N        L ++   L + L  
Sbjct: 249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAE 284

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 4e-11
 Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 23/292 (7%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRS-----------KAELIFPGKKTRFFPGVM 76
           +TG TG  G  L + L    ++V  + R  S           K          +   G +
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 77  IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
                  +   +     +   G     + S ++ +   +     T +++D +        
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 137 PSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRI 193
                ++T+   YG  +     E++P    + Y  A++   W     +   ++      +
Sbjct: 126 VKFYQASTS-ELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL 184

Query: 194 GIVLG---KDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNP 245
                          K+         G      LG+      W H  D V  ++  L N 
Sbjct: 185 FNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND 244

Query: 246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVL 297
                +  T         +     ++     W    E  +      G   V 
Sbjct: 245 EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 296

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (140), Expect = 2e-10
 Identities = 49/288 (17%), Positives = 93/288 (32%), Gaps = 41/288 (14%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVL------TRSRSKAELIFPGKKTRFFPG-VM 76
           M V VTG +G+IG     +L  + H V +L       RS         GK   F  G + 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 77  IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 136
                           V++ AG       S +   E  ++ +  T +++  +  +     
Sbjct: 61  NEALMTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA----N 115

Query: 137 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN-----KDVRLALI 191
               + +++   YG      + ES P+G         +     +  +      D  +AL+
Sbjct: 116 VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175

Query: 192 RIGIVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFSWIH 230
           R    +G            G    ++P     A G            P   G     +IH
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235

Query: 231 LDDIVNLIYEALSNPSYR---GVINGTAPNPVRLAEMCDHLGNVLGRP 275
           + D+ +    A+   + +    + N  A     + ++ +      G+P
Sbjct: 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.7 bits (133), Expect = 2e-09
 Identities = 38/278 (13%), Positives = 73/278 (26%), Gaps = 38/278 (13%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------------K 67
           + +S+TGA GFI   + +RL+ + H V      +++                       K
Sbjct: 16  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK 75

Query: 68  KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDL 127
            T     V              S   V +    + +    E  +     R    S     
Sbjct: 76  VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 135

Query: 128 INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVR 187
                                   S+    +     G   L ++  E        +  + 
Sbjct: 136 PEFKQLETTNV---------SLKESDAWPAEPQDAFG---LEKLATEELCKHYNKDFGIE 183

Query: 188 LALIRIGIVLGKDG---------GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 238
             + R   + G  G          A                G G Q  S+  +D+ V  +
Sbjct: 184 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 243

Query: 239 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 276
                +  +R  +N  +   V + EM + + +   +  
Sbjct: 244 LRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKL 280

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 54.5 bits (130), Expect = 4e-09
 Identities = 37/279 (13%), Positives = 79/279 (28%), Gaps = 48/279 (17%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 87
           + G  G +G  + ++L+       VL R+R +  L+       FF    I          
Sbjct: 7   IAGHRGMVGSAIRRQLEQRGDVELVL-RTRDELNLLDSRAVHDFFASERI---------- 55

Query: 88  QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 147
                V   A    G   ++    +     + + S ++   +++   V   + + ++   
Sbjct: 56  ---DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSC-- 108

Query: 148 YYGTSETEVFDESS-------PSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGK 199
            Y     +   ES        P+   Y +A++       +           +    + G 
Sbjct: 109 IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168

Query: 200 DGG----------ALAKMIPLFMMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 246
                        AL +            +   GSG     ++H+DD+       +    
Sbjct: 169 HDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 228

Query: 247 YR---------GVINGTAPNPVRLAEMCDHLGNVLGRPS 276
                        IN        + E+   +  V+G   
Sbjct: 229 EVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG 267

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 54.2 bits (129), Expect = 6e-09
 Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 33/323 (10%)

Query: 24  MTVSVTGATGFIGRRLVQRLQADNHQVRV-----LTRSRSKAEL-IFPGKKTRFFPGVMI 77
             + VTG  GFIG   V  +  ++  V V     LT + +KA L    G +     G + 
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDI- 61

Query: 78  AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 137
             + +  D +      +           S         +    T     L       +R 
Sbjct: 62  -ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGT--YTLLEAARKYDIRF 118

Query: 138 SVLVSATALGYYGTSET---------EVFDESSPSG--NDY-LAEVCREWEGTALKVNKD 185
             + +    G     E          E F   +     + Y   +   +    A   +  
Sbjct: 119 HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFG 178

Query: 186 VRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEA 241
           V+  +       G        +         G      G G+    WIH +D    ++  
Sbjct: 179 VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238

Query: 242 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR 301
           L+           A       E+ + +   +G+P         +    G      ++  +
Sbjct: 239 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH---VTDRAGHDLRYAIDASK 295

Query: 302 VVPARAKELGFPFKYRYVKDALK 324
               R  ELG+  ++    + L+
Sbjct: 296 ---LR-DELGWTPQFTDFSEGLE 314

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.1 bits (123), Expect = 1e-08
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 59
          +   V + GATG  G  L+ R+ ++    +V+  +R  
Sbjct: 1  TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA 38

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 1e-07
 Identities = 27/232 (11%), Positives = 60/232 (25%), Gaps = 25/232 (10%)

Query: 20  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 79
           +    +V + GA+G  GR L++ +       +V    R K        K      V   +
Sbjct: 11  RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK 70

Query: 80  EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 139
              +    QG        GT  G   +    +  ++  ++                    
Sbjct: 71  LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK-------------- 116

Query: 140 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI-RIGIVLG 198
                     G     +        +     +  + E  A           + R G++L 
Sbjct: 117 --------AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLC 168

Query: 199 KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 250
                 ++     +    G L         + +  +V  +   +  P  + +
Sbjct: 169 D--RQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQM 218

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (111), Expect = 8e-07
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPG 74
          M V + G  GFIG  L +RL  ++H +V  L                 F  G
Sbjct: 1  MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEG 52

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (112), Expect = 9e-07
 Identities = 37/285 (12%), Positives = 72/285 (25%), Gaps = 37/285 (12%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRVL-------TRSRSKAELI-----FPGKKTRFFPGV 75
           VTG  G+IG   V  L    +   V+           S  E +       G+   F    
Sbjct: 7   VTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMD 66

Query: 76  MIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 135
           ++ +    R   + S   V           S +   +     +  T ++++++       
Sbjct: 67  ILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKN 126

Query: 136 RPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTAL-KVNKDVRLALIRIG 194
                 +            E       +     ++   E     L + +K     L+R  
Sbjct: 127 LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYF 186

Query: 195 IVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFSWIHLDD 233
              G            G    ++P     A G                G     +IH+ D
Sbjct: 187 NPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246

Query: 234 IVN---LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 275
           +          L       + N        + +M   +    G+ 
Sbjct: 247 LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 46.7 bits (109), Expect = 1e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 56
          M + +TGA G +GR + ++L+  N +V      
Sbjct: 2  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 44.9 bits (104), Expect = 6e-06
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 58
          M + + G TG +G  L + L    + + +   S+ 
Sbjct: 1  MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 44.7 bits (104), Expect = 7e-06
 Identities = 46/286 (16%), Positives = 80/286 (27%), Gaps = 37/286 (12%)

Query: 28  VTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKAELIFPGKKTRF-FPGVMIAEEPQW 83
           +TG  GF+G  L     +    + V   L+R  +   L +      F F    I  +   
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDV 64

Query: 84  RDCIQGS--TAVVNLAGTPIGTRWSSEIKKEIK------------ESRIRVTSKVVDLIN 129
              I      +  +LAG    T        + +              +      ++    
Sbjct: 65  TRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 124

Query: 130 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-------NDYLAEVCREWEGTALKV 182
               G       + T   Y    +   +DES+          +   A+           +
Sbjct: 125 NKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL 184

Query: 183 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-----AGGPL---GSGQQWFSWIHLDDI 234
           N  V       G                            P    G+G+Q    +H +D+
Sbjct: 185 NTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDM 244

Query: 235 VNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS 276
           ++L + AL+N S        I GT  N + L E+   L +      
Sbjct: 245 ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 290

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 44.8 bits (104), Expect = 7e-06
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 64
           V VTG TGF G  L   LQ     V+  + +      +F
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF 49

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.2 bits (102), Expect = 1e-05
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 53
            V V G  G+ G      L   N++V ++
Sbjct: 2  SRVMVIGGDGYCGWATALHLSKKNYEVCIV 31

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 58
             +TG TG  G  L + L    ++V  L R  S
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 36

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 25 TVSVTGATGFIGRRLVQRLQADNHQVRVL 53
           V VTG  G+IG   V  L  + +   V 
Sbjct: 3  IVLVTGGAGYIGSHTVVELIENGYDCVVA 31

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRV---LTRSRSKAELIFPGKKTRFFPGVMI 77
          S M V V G  G+IG   V+ L  D NH V +   L  +  K++ +   +          
Sbjct: 1  SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 78 AEEPQWRD 85
            +P W D
Sbjct: 61 GPKPPWAD 68

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 80
          + V+V GATG +G  LV  L   +    ++ +L  + S  + +   + +     V   + 
Sbjct: 3  LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDF 62

Query: 81 PQWRDCI 87
                 
Sbjct: 63 SSVGLAF 69

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 9/112 (8%)

Query: 22  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 81
           +  +V + G+ GF+ R  +  L     +V V  R+   A+ +  G +      + + ++ 
Sbjct: 1   ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDA 59

Query: 82  QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 133
                +     V++L                + +S IR    VV     SP 
Sbjct: 60  ALDAEVAKHDLVISL--------IPYTFHATVIKSAIRQKKHVVTTSYVSPA 103

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Length = 147

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 4/50 (8%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKT 69
          M V + G  G +G  L+QR+  +      +    + S+        GK  
Sbjct: 1  MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDA 50

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 38.9 bits (88), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 28 VTGATGFIGRRLVQRLQADN-HQVRVL 53
          VTG  GFIG  +V+ L       + V+
Sbjct: 4  VTGGAGFIGSNIVKALNDKGITDILVV 30

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 25  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQ 82
            + +T A   IG+        +  +V     + SK + +  +PG +TR        +  Q
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ 67

Query: 83  WRDCIQGSTAVVNLAGTP 100
           + + ++    + N+AG  
Sbjct: 68  FANEVERLDVLFNVAGFV 85

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 61
          M V++ G TG +G+ L  RL    H++ V +R   KAE
Sbjct: 1  MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL 62
          S  +V VTGA   IG  LVQ+L  D +   ++  +R   + 
Sbjct: 2  SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	328
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.93
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.82
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.82
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.8
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.8
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.79
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.79
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.79
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.79
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.79
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.78
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.78
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.77
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.77
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.77
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.77
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.77
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.77
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.76
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.75
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.75
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.75
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.75
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.74
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.74
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.74
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.74
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.73
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.73
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.73
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.73
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.73
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.73
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.72
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.72
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.72
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.72
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.72
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.71
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.7
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.69
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.69
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.68
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.68
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.67
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.67
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.66
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.66
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.65
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.65
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.64
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.63
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.61
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.6
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.59
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.58
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.57
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.54
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.51
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.51
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.49
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.48
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.46
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.37
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.35
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.31
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.27
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.14
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.76
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.52
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.51
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.5
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.48
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.37
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.34
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.3
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.28
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.25
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.23
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.22
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.22
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.2
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.18
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.17
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.17
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.16
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.13
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.08
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.07
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.05
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.05
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.02
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.01
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	98.01
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.0
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.0
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.91
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.9
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.9
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.87
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.85
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.83
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.83
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.82
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.81
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.78
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.72
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.72
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.7
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.67
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.67
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.66
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.66
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.62
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.62
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.6
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.58
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.54
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.52
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.51
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.47
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.44
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.43
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.39
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.39
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.38
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.35
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.32
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.3
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.29
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.16
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.15
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.07
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.04
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.98
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.96
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.92
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.9
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.84
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.83
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.79
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.74
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.7
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.69
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.69
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.69
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.69
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.66
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.64
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.57
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.54
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.52
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.51
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.5
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.47
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.42
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.42
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.38
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.37
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.3
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.3
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.29
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.27
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.27
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.27
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	96.23
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.23
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.2
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.2
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.19
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.14
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.14
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.1
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.08
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.07
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.06
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	96.06
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.0
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.99
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.99
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.98
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.98
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.97
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.96
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.92
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.91
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.8
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.79
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	95.79
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.78
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.75
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.74
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.68
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.65
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.64
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.58
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.57
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.43
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.41
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.34
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.32
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	95.23
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.21
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.13
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.12
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.12
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.07
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.03
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.01
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.84
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.82
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.75
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.73
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.7
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.67
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	94.6
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.58
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.47
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.45
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.37
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.37
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.36
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.08
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	93.93
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.61
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.6
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.59
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.54
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.53
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.49
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.49
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.3
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.28
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	93.15
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.15
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.12
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.91
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.78
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	92.53
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.52
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.5
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.23
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.13
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	92.02
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	91.89
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.86
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.71
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.65
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.65
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.62
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.5
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	91.4
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	91.38
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.31
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.25
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.17
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.09
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	90.93
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	90.73
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	90.73
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	90.45
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	90.43
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	90.32
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	90.29
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.89
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	89.77
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	89.75
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	89.61
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.46
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.13
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	88.91
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.83
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.84
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.66
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.63
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	87.41
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	87.25
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.21
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	87.19
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	87.12
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.77
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.57
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.74
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.08
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	85.08
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.02
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.83
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	84.28
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	84.13
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.83
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.4
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.88
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.61
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.4
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	82.21
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	81.89
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.44
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	81.36
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.96
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.55
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	80.54
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	80.51
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	80.25
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	80.22

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-43  Score=298.55  Aligned_cols=284  Identities=19%  Similarity=0.211  Sum_probs=219.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      +|||||||||||||++|+++|+++||+|++++|......... ...   ...++|+.+.+.++.++.++|+|||+|+...
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~   77 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---GHENFELINHDVVEPLYIEVDQIYHLASPAS   77 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---TCTTEEEEECCTTSCCCCCCSEEEECCSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc---CCCceEEEehHHHHHHHcCCCEEEECcccCC
Confidence            479999999999999999999999999999987544332222 111   1556899999988888889999999999753


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC-----C--CCCch-HHHHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----P--SGNDY-LAEVCR  173 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~-----~--~~~~y-~~k~~~  173 (328)
                      . .....++...++.|+.++.+++++|++  .++ ++||+||+++  ||.....+.+|+.     |  |...| .+|...
T Consensus        78 ~-~~~~~~~~~~~~~Nv~g~~~ll~~~~~--~~~-k~I~~SS~~v--y~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~  151 (312)
T d2b69a1          78 P-PNYMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  151 (312)
T ss_dssp             H-HHHTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEGGG--GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             c-hhHHhCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEEChhe--ecCCCCCCCCccccCCCCCCCCccHHHHHHHHH
Confidence            2 122345678889999999999999999  555 7999999999  9977666655543     3  33456 778888


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcch-hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                      |.+...+...++++++++||++||||+.... ..+++.+  +...++++   +++.+.++++|++|++++++.+++.. .
T Consensus       152 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~  230 (312)
T d2b69a1         152 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-V  230 (312)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-C
T ss_pred             HHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-c
Confidence            8888877777799999999999999975432 2344433  44566664   78889999999999999999998765 4


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHHHH
Q 020254          248 RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKA  325 (328)
Q Consensus       248 ~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l~~  325 (328)
                      .++||+++++.+++.++++.+.+.+|.+..+.. +..     .++     ......+++|++ .|||+|+++ ++++|++
T Consensus       231 ~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~~lgw~p~~~-l~~~I~~  299 (312)
T d2b69a1         231 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA-----QDD-----PQKRKPDIKKAKLMLGWEPVVP-LEEGLNK  299 (312)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC-----TTC-----CCCCCBCCHHHHHHHCCCCCSC-HHHHHHH
T ss_pred             CCceEecCCcccchhhHHHHHHHHhCCCCceEECCCC-----CCC-----CCeeeECHHHHHHHHCCCCCCC-HHHHHHH
Confidence            779999999999999999999999997643221 110     111     123456778885 589999995 9999999


Q ss_pred             hh
Q 020254          326 IM  327 (328)
Q Consensus       326 ~l  327 (328)
                      ++
T Consensus       300 ~i  301 (312)
T d2b69a1         300 AI  301 (312)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-42  Score=303.81  Aligned_cols=300  Identities=16%  Similarity=0.130  Sum_probs=218.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cccCC----CCCccccCceeecCChhhHhhcC--CCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--GSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~----~~~~~~~~~~d~~~~~~~~~~~~--~~d~   92 (328)
                      |+|||||||||||++|+++|+++||+|++++|..+..     .....    ......+..+|+.|.+.++++++  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999965421     11100    00111245679999999999997  5799


Q ss_pred             EEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCC-CCCCcEEEEecccceeecCCCcccccCCCCC--CCch-H
Q 020254           93 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-L  168 (328)
Q Consensus        93 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~  168 (328)
                      |||+|+..+. ..+..++...++.|+.++.+|+++|++.. .+..+|||+||+++  ||.....+++|+++.  .+.| .
T Consensus        82 v~h~aa~~~~-~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v--YG~~~~~~~~E~~~~~P~~~Y~~  158 (357)
T d1db3a_          82 VYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSPYAV  158 (357)
T ss_dssp             EEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG--GTTCCSSSBCTTSCCCCCSHHHH
T ss_pred             EEEeeccccc-chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh--hCCCCCCCcCCCCCCCCCChHHH
Confidence            9999997533 34456678889999999999999999831 23346999999999  998777889998875  4567 8


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH-HHHcCCC----CCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~-~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|...|.....+...++++++++||+++|||..+.   ...+...+ ....+.+    .+++++.++++|++|+|+++..
T Consensus       159 sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~  238 (357)
T d1db3a_         159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM  238 (357)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHH
Confidence            88888888888777779999999999999996432   12222333 3333433    2788999999999999999999


Q ss_pred             HhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHH---Hhc------Cc------------ceeeec
Q 020254          241 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKA---VLG------EG------------AFVVLE  298 (328)
Q Consensus       241 ~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~---~~~------~~------------~~~~~~  298 (328)
                      +++.. .++.||+++++++|++|+++.+.+.+|....+ ..+......   ...      ..            ++....
T Consensus       239 ~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  317 (357)
T d1db3a_         239 MLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVE  317 (357)
T ss_dssp             TTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-C
T ss_pred             HHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcccc
Confidence            98875 46799999999999999999999999854221 111110000   000      00            001122


Q ss_pred             CcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          299 GQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       299 ~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      ...++++|+++ |||+|+++ ++|+|+++++
T Consensus       318 ~~~~d~skakk~LGw~P~~s-l~egI~~~I~  347 (357)
T d1db3a_         318 TLLGDPTKAHEKLGWKPEIT-LREMVSEMVA  347 (357)
T ss_dssp             CCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             ccccCHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            34567888865 89999995 9999999863

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.9e-42  Score=297.16  Aligned_cols=289  Identities=21%  Similarity=0.244  Sum_probs=219.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeE------EEEecCCCcccc--c--CCCCCccccCceeecCChhhHhhcCCCcEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQV------RVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      |||||||||||||++|++.|+++||+|      +.+++.......  .  ........+...|..+.........++|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            799999999999999999999999854      444443221111  1  111111113345666777777788899999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-HHH
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAE  170 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-~~k  170 (328)
                      +|+|+.. ........+...++.|+.++.+++++|.+  .+++++||+||+++  ||.....+.+|+++..  +.| .+|
T Consensus        81 i~~a~~~-~~~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~I~~Ss~~~--yg~~~~~~~~E~~~~~p~~~Y~~sK  155 (322)
T d1r6da_          81 VHFAAES-HVDRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTNQV--YGSIDSGSWTESSPLEPNSPYAASK  155 (322)
T ss_dssp             EECCSCC-CHHHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             Eeecccc-cccccccchHHHhhhhHHHHHHHHHHHHH--cCCceEEEeeccee--ecCCCCCCCCCCCCCCCCCHHHHHH
Confidence            9999864 22233445567788999999999999999  78899999999999  9988888899988854  467 788


Q ss_pred             HHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCC
Q 020254          171 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ...|.....+..+++++++++||++||||++... .+++.+  +...++++   +++++.++++|++|+|+++..+++++
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence            8888888887777799999999999999976432 344433  44566664   78899999999999999999999998


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccccHHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL  323 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~~~~~~l  323 (328)
                      ..+++||+++++++++.|+++.+.+.+|.+.. +...        . ..........++++|++ .|||+|+++ ++|+|
T Consensus       235 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~--------~-~~~~~~~~~~~d~~k~~~~lg~~p~~~-~eegI  304 (322)
T d1r6da_         235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV--------A-DRKGHDLRYSLDGGKIERELGYRPQVS-FADGL  304 (322)
T ss_dssp             CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEE--------C-CCTTCCCBCCBCCHHHHHHHCCCCCSC-HHHHH
T ss_pred             CCCCeeEEeecccchhHHHHHHHHHHhCCCccceeec--------C-CCCCCCceeeeCHHHHHHHHCCCCCCC-HHHHH
Confidence            77779999999999999999999999997621 1100        0 00001122456788886 589999995 99999


Q ss_pred             HHhhC
Q 020254          324 KAIMS  328 (328)
Q Consensus       324 ~~~l~  328 (328)
                      +++++
T Consensus       305 ~~~i~  309 (322)
T d1r6da_         305 ARTVR  309 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7e-41  Score=293.25  Aligned_cols=288  Identities=17%  Similarity=0.203  Sum_probs=215.1

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |.+.|||||||||||||++|+++|+++||+|++++|......... ...   .+..+|+.+.+.+.++++++|+|||+|+
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD---EFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCS---EEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccC---cEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            346789999999999999999999999999999988665432221 111   1334577777888888899999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccccc-------CCCC--CCCch-H
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD-------ESSP--SGNDY-L  168 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~-------e~~~--~~~~y-~  168 (328)
                      ...........+......|+.++.++++++++  .+++++|++||..+  |+.....+.+       |..|  |.+.| .
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~--~~vk~~i~~SS~~~--~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~  164 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACI--YPEFKQLETTNVSLKESDAWPAEPQDAFGL  164 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGG--SCGGGSSSSSSCEECGGGGSSBCCSSHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHh--hCcccccccccccc--ccccccccccccccccccCCcCCCCCHHHH
Confidence            75443333456778889999999999999999  79999999999998  8865443332       3333  34567 7


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhh-HHHH--HHHcCCC---CCCCCcccccccHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKM-IPLF--MMFAGGP---LGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~-~~~~--~~~~~~~---~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      +|...|.....+...++++++++||+++||+.+...   ... ....  ......+   .+++.+.++++|++|++++++
T Consensus       165 sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~  244 (363)
T d2c5aa1         165 EKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL  244 (363)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHH
Confidence            788778777777766799999999999999975321   111 1111  2222222   267888999999999999999


Q ss_pred             HHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcccc
Q 020254          240 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYR  317 (328)
Q Consensus       240 ~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~~~  317 (328)
                      .+++.. .+++||+++++.+++.|+++.+.+..|.+..+. .|..      .+     .....++++|++ .|||+|+++
T Consensus       245 ~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~------~~-----~~~~~~d~ska~~~LGw~p~~s  312 (363)
T d2c5aa1         245 RLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP------EG-----VRGRNSDNNLIKEKLGWAPNMR  312 (363)
T ss_dssp             HHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC------CC-----CSBCEECCHHHHHHHSCCCCCC
T ss_pred             HHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCC------CC-----ccccccCHHHHHHHhCCCCCCC
Confidence            999875 477999999999999999999999999774331 1110      11     122345778886 489999995


Q ss_pred             cHHHHHHHhh
Q 020254          318 YVKDALKAIM  327 (328)
Q Consensus       318 ~~~~~l~~~l  327 (328)
                       ++|+|++++
T Consensus       313 -leegi~~ti  321 (363)
T d2c5aa1         313 -LKEGLRITY  321 (363)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             999999986

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1e-40  Score=289.76  Aligned_cols=299  Identities=17%  Similarity=0.128  Sum_probs=224.7

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-------CCCC--CccccCceeecCChhhHhhcCCC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGK--KTRFFPGVMIAEEPQWRDCIQGS   90 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~--~~~~~~~~d~~~~~~~~~~~~~~   90 (328)
                      +.++|+|||||||||||++|+++|+++||+|++++|........       ....  ....+...|..|...+.....++
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence            35678999999999999999999999999999999854422110       0000  00013345666777777888899


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCC--Cch-
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-  167 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y-  167 (328)
                      +.|+|+++.. ....+..++...++.|+.++.+++++|.+  .+++++||+||+++  ||.....+.+|++|..  +.| 
T Consensus        93 ~~v~~~~a~~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~--~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~  167 (341)
T d1sb8a_          93 DYVLHQAALG-SVPRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASSST--YGDHPGLPKVEDTIGKPLSPYA  167 (341)
T ss_dssp             SEEEECCSCC-CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCSHHH
T ss_pred             cccccccccc-cccccccCccchhheeehhHHHHHHHHHh--cCCceEEEccccee--eCCCCCCCccCCCCCCCCCcch
Confidence            9999999864 22334566788999999999999999999  78899999999999  9988888899988854  567 


Q ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc---chhhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHH
Q 020254          168 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .+|...|.....+....+++++++||++|||++..   ....++..+  ....++++   +++.+.++++|++|++.++.
T Consensus       168 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~  247 (341)
T d1sb8a_         168 VTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL  247 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhh
Confidence            77888888877777777999999999999999753   223344433  55567765   78899999999999999999


Q ss_pred             HHhhCCC--CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCccc
Q 020254          240 EALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKY  316 (328)
Q Consensus       240 ~~~~~~~--~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~  316 (328)
                      .++..+.  .+++||+++++.+|+.|+++.+.+.++.+.....+....    .............+++|+++ |||+|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~k~~~~LGw~p~~  323 (341)
T d1sb8a_         248 LAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY----RDFREGDVRHSLADISKAAKLLGYAPKY  323 (341)
T ss_dssp             HHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEE----ECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred             hhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccc----cCCCCCCcCeeeeCHHHHHHHHCCCcCC
Confidence            9987754  455999999999999999999999988653211111000    00000011234567788865 8999999


Q ss_pred             ccHHHHHHHhhC
Q 020254          317 RYVKDALKAIMS  328 (328)
Q Consensus       317 ~~~~~~l~~~l~  328 (328)
                      + ++++|+++++
T Consensus       324 s-l~~gi~~ti~  334 (341)
T d1sb8a_         324 D-VSAGVALAMP  334 (341)
T ss_dssp             C-HHHHHHHHHH
T ss_pred             C-HHHHHHHHHH
Confidence            5 9999999863

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=9.7e-41  Score=291.53  Aligned_cols=299  Identities=15%  Similarity=0.152  Sum_probs=214.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEE-EecCCCcc--cccCCC--CCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKA--ELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~--~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      |||||||||||||++|+++|++.||+|++ +++.....  ......  .....+...|+.|++.+.++++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999987544 44432221  111111  1111244578889999988886  69999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCC-------CCCCcEEEEecccceeecCCCccccc----------C
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATALGYYGTSETEVFD----------E  159 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~~v~~Ss~~v~~yg~~~~~~~~----------e  159 (328)
                      |+.. .......++...++.|+.++.+++++|++..       .++++||++||+.+  ||.....+..          |
T Consensus        81 Aa~~-~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          81 AAES-HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV--YGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             CSCC-CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG--GCCCCCGGGSCTTSCCCCBCT
T ss_pred             cccc-chhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee--eCCCccCCccccccCCCCccc
Confidence            9974 2233345567889999999999999998720       13468999999999  9966543322          2


Q ss_pred             CCC--CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCC---CCCCcccccccH
Q 020254          160 SSP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL  231 (328)
Q Consensus       160 ~~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v  231 (328)
                      ..+  |.+.| .+|...|.....+...++++++++||++||||++.. ..+++.+  +...++++   +++++.++++|+
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v  236 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence            333  34557 888888888888877779999999999999997643 2344433  45567765   788999999999


Q ss_pred             HHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHH-HC
Q 020254          232 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-EL  310 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l  310 (328)
                      +|+|+++..+++....+++|||+++++++..|+++.+.+.++........... ................++.+|++ .|
T Consensus       237 ~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~l  315 (361)
T d1kewa_         237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYRE-QITYVADRPGHDRRYAIDAGKISREL  315 (361)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGG-GEEEECCCTTCCCBCCBCCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCccc-ceeecCCCCCCCceeeeCHHHHHHHH
Confidence            99999999999987767799999999999999999999887643111111000 00000000111233456778886 58


Q ss_pred             CCCcccccHHHHHHHhhC
Q 020254          311 GFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       311 G~~p~~~~~~~~l~~~l~  328 (328)
                      ||+|+++ ++++|+++++
T Consensus       316 gw~P~~~-l~e~i~~ti~  332 (361)
T d1kewa_         316 GWKPLET-FESGIRKTVE  332 (361)
T ss_dssp             CCCCSCC-HHHHHHHHHH
T ss_pred             CCCCCCC-HHHHHHHHHH
Confidence            9999996 9999999873

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.7e-39  Score=281.17  Aligned_cols=290  Identities=16%  Similarity=0.146  Sum_probs=212.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC--ccc-ccCC--CCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS--KAE-LIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~-~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      ||+|||||||||||++|+++|++.||+|.++.++..  ... ....  ......+..+|+.|.+.+.+++.++|.|+|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a   81 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence            789999999999999999999999987665554321  111 0000  00111244678989999999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCC------------cccccCCCC--C
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE------------TEVFDESSP--S  163 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~------------~~~~~e~~~--~  163 (328)
                      +.. ....+..++.+.++.|+.++.++++++..  .+ .++|++||+.+  ||...            ....+|.++  |
T Consensus        82 ~~~-~~~~~~~~~~~~~~~N~~g~~nll~~~~~--~~-~k~i~~ss~~v--yg~~~~~~~~~~~~~~~~~~~~e~~~~~p  155 (346)
T d1oc2a_          82 AES-HNDNSLNDPSPFIHTNFIGTYTLLEAARK--YD-IRFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETNYNP  155 (346)
T ss_dssp             SCC-CHHHHHHCCHHHHHHHTHHHHHHHHHHHH--HT-CEEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             hcc-cccchhhCcccceeeehHhHHhhhhhhcc--cc-ccccccccceE--ecccCccccccccccCcccccccCCCCCC
Confidence            864 22233455678889999999999999998  44 57899999998  87421            123344444  3


Q ss_pred             CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCC---CCCCcccccccHHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL---GSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~i~v~D~a~~~  238 (328)
                      .+.| .+|...|.....+...++++++++||++||||.......+...+ ....+.++   +++++.++++|++|+|+++
T Consensus       156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~  235 (346)
T d1oc2a_         156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV  235 (346)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence            3557 77888888777777667999999999999999754333333333 33455543   7889999999999999999


Q ss_pred             HHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCC-CCC-cHHHHHHHhcCcceeeecCcccCchHHH-HCCCCcc
Q 020254          239 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPV-PEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFK  315 (328)
Q Consensus       239 ~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~~p~  315 (328)
                      +.++..+..++.||++++++.++.++++.+.+.++.+.. +.. +..     .+..     ....++++|++ .|||+|+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~d~~k~~~~LGw~P~  305 (346)
T d1oc2a_         236 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR-----AGHD-----LRYAIDASKLRDELGWTPQ  305 (346)
T ss_dssp             HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC-----TTCC-----CBCCBCCHHHHHHHCCCCS
T ss_pred             HHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCC-----CCCC-----ceeeeCHHHHHHHHCCCCc
Confidence            999998887889999999999999999999999987632 211 110     1111     12335678885 5899999


Q ss_pred             cccHHHHHHHhhC
Q 020254          316 YRYVKDALKAIMS  328 (328)
Q Consensus       316 ~~~~~~~l~~~l~  328 (328)
                      +++|+++|+++++
T Consensus       306 ~t~l~e~i~~ti~  318 (346)
T d1oc2a_         306 FTDFSEGLEETIQ  318 (346)
T ss_dssp             CCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            9679999999863

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-39  Score=282.21  Aligned_cols=289  Identities=19%  Similarity=0.263  Sum_probs=211.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----CCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      |||||||||||||++|++.|+++||+|++++|..........     ......+.++|+.|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            789999999999999999999999999999874433221100     00011255689999999999987  89999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC---CCCch-HHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LAEVC  172 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~---~~~~y-~~k~~  172 (328)
                      |+.. .......++...++.|+.++.+++++|++  .+++++|++||.++  |+.....+..|..+   +...| ..|..
T Consensus        81 Aa~~-~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~--~~v~~~i~~Ss~~v--y~~~~~~~~~e~~~~~~p~~~Y~~sK~~  155 (338)
T d1udca_          81 AGLK-AVGESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATV--YGDQPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CSCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred             CCcc-chhhHHhCHHHHHHhHHHHHHHHHHHHHH--hCCCEEEecCcceE--EccccccccccccccCCCcchHHHHHhh
Confidence            9964 22334456778999999999999999999  78999999999998  88776665555543   34456 77777


Q ss_pred             HHHHHHH-hcccCCCeEEEEEeceEEcCCCcc---------hhhhHHHH-HHHc--CCCC---------CCCCccccccc
Q 020254          173 REWEGTA-LKVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFA--GGPL---------GSGQQWFSWIH  230 (328)
Q Consensus       173 ~~~~~~~-~~~~~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~~~~--~~~~---------~~~~~~~~~i~  230 (328)
                      .|..... .....+++++++||+++||+....         ...+++.+ ....  ..++         .++.+.++++|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~  235 (338)
T d1udca_         156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred             hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence            7766653 333458999999999999986421         12344444 2222  2222         34677899999


Q ss_pred             HHHHHHHHHHHhhCC---CCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhcCcceeeecCcccCchH
Q 020254          231 LDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPAR  306 (328)
Q Consensus       231 v~D~a~~~~~~~~~~---~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~  306 (328)
                      ++|++.+...+....   ...++||+++++++++.|+++.+.+.+|.+..+.. |..     .++     .....++++|
T Consensus       236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k  305 (338)
T d1udca_         236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR-----EGD-----LPAYWADASK  305 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCC-----TTC-----CSBCCBCCHH
T ss_pred             EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCC-----CCC-----CCEeeECHHH
Confidence            999998887766532   23459999999999999999999999997632211 110     111     1234567888


Q ss_pred             HHH-CCCCcccccHHHHHHHhhC
Q 020254          307 AKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       307 ~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      +++ |||+|+++ ++++|+++++
T Consensus       306 ~~~~lgwkp~~~-l~egi~~ti~  327 (338)
T d1udca_         306 ADRELNWRVTRT-LDEMAQDTWH  327 (338)
T ss_dssp             HHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHCCCcCCC-HHHHHHHHHH
Confidence            875 89999995 9999999873

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.4e-38  Score=273.99  Aligned_cols=291  Identities=15%  Similarity=0.130  Sum_probs=215.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc--c--CCCCCccccCceeecCChhhHhhcC--CCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a   97 (328)
                      |+|||||||||||++|+++|+++||+|++++|.......  +  ........+..+|+.|.+.+.+.+.  .+++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            589999999999999999999999999999997654221  1  0100111245678999998888775  578899988


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCC-cEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHH
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR  173 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~  173 (328)
                      +.. ........+...+..|+.++.++++++++  .+.+ ++++.||+.+  ||.....+.+|++|.  .+.| .+|...
T Consensus        81 ~~~-~~~~~~~~~~~~~~~n~~g~~~~l~~~~~--~~~~~~~i~~Ss~~~--~~~~~~~~~~E~~~~~p~~~Y~~sK~~~  155 (321)
T d1rpna_          81 AQS-FVGASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEM--FGLIQAERQDENTPFYPRSPYGVAKLYG  155 (321)
T ss_dssp             SCC-CHHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ccc-cccccccchHHHHhhhhhchHHHHHHHHH--hCCCcccccccchhh--cCcccCCCCCCCCCccccChhHHHHHHH
Confidence            764 22223345678889999999999999998  5554 5777777776  887777788888874  4566 778888


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH-HHHcCC-C-C--CCCCcccccccHHHHHHHHHHHhhCC
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-MMFAGG-P-L--GSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~-~~~~~~-~-~--~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      |.....+...++++++++||+++|||..+.   ...+...+ +...++ + +  +++++.++++|++|+|+++..+++++
T Consensus       156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~  235 (321)
T d1rpna_         156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  235 (321)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence            888777777779999999999999996422   12233333 333333 2 2  78899999999999999999999987


Q ss_pred             CCCceEEecCCCccCHHHHHHHHHHHhCCCCC-C-CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHH
Q 020254          246 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-L-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA  322 (328)
Q Consensus       246 ~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~-~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~  322 (328)
                      . .+.||+++++..++.++++.+.+.+|.+.. + ..+....+  .+     .......+++|+++ |||+|+++ ++|+
T Consensus       236 ~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r--p~-----~~~~~~~d~~k~~k~lG~~P~~~-l~e~  306 (321)
T d1rpna_         236 K-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFR--PA-----EVDVLLGNPAKAQRVLGWKPRTS-LDEL  306 (321)
T ss_dssp             S-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCC--SS-----CCCBCCBCTHHHHHHHCCCCCSC-HHHH
T ss_pred             C-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCC--CC-----ccCCccCCHHHHHHHHCCCcCCC-HHHH
Confidence            5 679999999999999999999999997621 1 11111000  11     12234557788865 89999995 9999


Q ss_pred             HHHhhC
Q 020254          323 LKAIMS  328 (328)
Q Consensus       323 l~~~l~  328 (328)
                      |+++++
T Consensus       307 i~~tv~  312 (321)
T d1rpna_         307 IRMMVE  312 (321)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.2e-38  Score=271.85  Aligned_cols=296  Identities=17%  Similarity=0.250  Sum_probs=211.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHh-hcCCCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~~~  101 (328)
                      |||||||||||||++|+++|+++| ++|+++++............. ..+...|+.+.+.+.+ +++++|+|||+|+...
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~-~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~   79 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCC-eEEEECccCChHHHHHHHHhCCCcccccccccc
Confidence            689999999999999999999999 589999987665554443221 1245668877766554 6678999999999742


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC---------CCCch-HHHH
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---------SGNDY-LAEV  171 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~---------~~~~y-~~k~  171 (328)
                      . ......+......|+.++.++++++.+  .+. ++++.||+.+  |+.......+|..+         +...| .+|.
T Consensus        80 ~-~~~~~~~~~~~~~nv~gt~~ll~~~~~--~~~-~~~~~ss~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          80 P-IEYTRNPLRVFELDFEENLRIIRYCVK--YRK-RIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             H-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTC-EEEEECCGGG--GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             c-cccccCCcccccccccccccccccccc--ccc-cccccccccc--cccccccccccccccccccccCCCcchhhhccc
Confidence            2 233455678899999999999999999  444 6678899888  88766554443322         22346 7788


Q ss_pred             HHHHHHHHhcccCCCeEEEEEeceEEcCCCcch-------hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHH
Q 020254          172 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..|.....+...++++++++||+.+||+.....       ......+  +...++++   +++++.++++|++|+|+++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            888888877777799999999999999854211       1222322  44566664   78899999999999999999


Q ss_pred             HHhhCCC---CCceEEecCCC-ccCHHHHHHHHHHHhCCCCC-CCCcHHHH------HHHhcCcceeeecCcccCchHHH
Q 020254          240 EALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPSW-LPVPEFAL------KAVLGEGAFVVLEGQRVVPARAK  308 (328)
Q Consensus       240 ~~~~~~~---~~g~~~i~~~~-~~~~~e~~~~i~~~~g~~~~-~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~  308 (328)
                      .+++.+.   .+++||+++++ .+|+.|+++.+.+.+|.... ...|....      ....+. ........+++++|++
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~  312 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK-GYQDVEHRKPSIRNAH  312 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHHH
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccc-ccccccccccCHHHHH
Confidence            9998743   34599998765 58999999999999986532 22221100      000000 0001123456788886


Q ss_pred             H-CCCCcccccHHHHHHHhhC
Q 020254          309 E-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       309 ~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      + |||+|+++ ++|+|+++++
T Consensus       313 ~~lgw~P~~s-leegl~~ti~  332 (342)
T d2blla1         313 RCLDWEPKID-MQETIDETLD  332 (342)
T ss_dssp             HHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHCCCcCCC-HHHHHHHHHH
Confidence            4 89999995 9999999863

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-38  Score=271.89  Aligned_cols=300  Identities=15%  Similarity=0.101  Sum_probs=216.0

Q ss_pred             CeE-EEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc-----ccCCCC-----CccccCceeecCChhhHhhcC--CC
Q 020254           24 MTV-SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGK-----KTRFFPGVMIAEEPQWRDCIQ--GS   90 (328)
Q Consensus        24 ~~i-lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~-----~~~~~~~~d~~~~~~~~~~~~--~~   90 (328)
                      ||| ||||||||||++|+++|+++||+|++++|.++...     .+....     ....+...|+.|++.+..++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            578 99999999999999999999999999999764321     111100     011244568889999998885  68


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCC-CCCCcEEEEecccceeecCCCcccccCCCCCC--Cch
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY  167 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~--~~y  167 (328)
                      ++|+|+++.. ........+....++|+.++.++++++++.. .+.+++||+||+++  ||.....+++|++|..  +.|
T Consensus        81 ~~v~~~~a~~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~P~~~Y  157 (347)
T d1t2aa_          81 TEIYNLGAQS-HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL--YGKVQEIPQKETTPFYPRSPY  157 (347)
T ss_dssp             SEEEECCSCC-CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG--TCSCSSSSBCTTSCCCCCSHH
T ss_pred             ceeeeeeecc-ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhe--ecCCCCCCCCCCCCCCCCCHH
Confidence            8999999864 2233345567778999999999999999841 23357999999999  9988788899988854  457


Q ss_pred             -HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH-HH-HcCCCC---CCCCcccccccHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-MM-FAGGPL---GSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~-~~-~~~~~~---~~~~~~~~~i~v~D~a~~~  238 (328)
                       .+|...|.....+...++++++++||+++|||....   ...+...+ .. ....++   +++.+.++++|++|+++++
T Consensus       158 g~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~  237 (347)
T d1t2aa_         158 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM  237 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHH
Confidence             788888888777766679999999999999996432   12222222 22 223332   7888999999999999999


Q ss_pred             HHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCC-cHHHHHHH--hcCc---------ceeeecCcccCchH
Q 020254          239 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAV--LGEG---------AFVVLEGQRVVPAR  306 (328)
Q Consensus       239 ~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~-p~~~~~~~--~~~~---------~~~~~~~~~~~~~~  306 (328)
                      ..++.... .+.|++..+...+..++...+...+++...... +.......  ....         .+.......++++|
T Consensus       238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~sk  316 (347)
T d1t2aa_         238 WLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTK  316 (347)
T ss_dssp             HHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHH
T ss_pred             HHHhhcCC-CccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHH
Confidence            99999865 568999999999999999999999987622111 11100000  0000         00011123457888


Q ss_pred             HHH-CCCCcccccHHHHHHHhhC
Q 020254          307 AKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       307 ~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      +++ |||+|+++ ++|+|+++++
T Consensus       317 ak~~Lgw~P~~s-l~e~i~~~I~  338 (347)
T d1t2aa_         317 AKQKLNWKPRVA-FDELVREMVH  338 (347)
T ss_dssp             HHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             HHHHHCCCcCCC-HHHHHHHHHH
Confidence            865 89999995 9999999863

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-37  Score=266.21  Aligned_cols=274  Identities=12%  Similarity=0.160  Sum_probs=209.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  100 (328)
                      +|||||||||||||++|+++|+++|+.|+++++..                .+|+.+.+.+.++++  ++|.|+|+|+..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~   65 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAKV   65 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------hccccCHHHHHHHHhhcCCCEEEEcchhc
Confidence            46999999999999999999999999998765432                368888888888875  689999999865


Q ss_pred             CCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC-------CCch-HHHHH
Q 020254          101 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-------GNDY-LAEVC  172 (328)
Q Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~-------~~~y-~~k~~  172 (328)
                      ...........+.++.|+.++.+++++|.+  .+++++||+||.++  ||.....+++|+.+.       .+.| .+|..
T Consensus        66 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~v~~~i~~SS~~v--yg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  141 (315)
T d1e6ua_          66 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSSCI--YPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  141 (315)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECCceE--cCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence            443333455677788999999999999999  78999999999999  998776666665432       2247 77888


Q ss_pred             HHHHHHHhcccCCCeEEEEEeceEEcCCCcch---hh----hHH---HHHHHcCCCC---CCCCcccccccHHHHHHHHH
Q 020254          173 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AK----MIP---LFMMFAGGPL---GSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       173 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~----~~~---~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .|.....+..+++++++++||++||||++...   ..    +..   ......+.++   +++...++++|++|+++++.
T Consensus       142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~  221 (315)
T d1e6ua_         142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  221 (315)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence            88887777777799999999999999975321   11    111   1122334443   67788899999999999999


Q ss_pred             HHhhCCC---------CCceEEecCCCccCHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhcCcceeeecCcccCchHHHH
Q 020254          240 EALSNPS---------YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPARAKE  309 (328)
Q Consensus       240 ~~~~~~~---------~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (328)
                      .++....         ..+.++++.+...+..++++.+.+.+|.+..+.. +..     .++     .....++++|+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~-----~~~-----~~~~~~d~sk~k~  291 (315)
T d1e6ua_         222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK-----PDG-----TPRKLLDVTRLHQ  291 (315)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS-----CCC-----CSBCCBCCHHHHH
T ss_pred             HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCC-----CCC-----CceeccCHHHHHH
Confidence            9986542         3458999999999999999999999997632211 100     011     1223567888999


Q ss_pred             CCCCcccccHHHHHHHhh
Q 020254          310 LGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       310 lG~~p~~~~~~~~l~~~l  327 (328)
                      |||+|+++ ++|+|++++
T Consensus       292 Lg~~p~~~-l~e~i~~ti  308 (315)
T d1e6ua_         292 LGWYHEIS-LEAGLASTY  308 (315)
T ss_dssp             TTCCCCCC-HHHHHHHHH
T ss_pred             cCCCCCCC-HHHHHHHHH
Confidence            99999995 999999876

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-37  Score=266.06  Aligned_cols=290  Identities=18%  Similarity=0.169  Sum_probs=206.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----------CCccccCceeecCChhhHhhcC--C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----------KKTRFFPGVMIAEEPQWRDCIQ--G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~   89 (328)
                      .+||||||||||||++|+++|+++||+|+++++...........           .....+..+|+.|.+.+++.+.  +
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            46899999999999999999999999999998643322111100           0011245679999999988875  5


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC---CCCCc
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS---PSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~---~~~~~  166 (328)
                      +++++|+|+... ......++.+..+.|+.++.++++++++  .++++++|+||+.+  |+........+..   .+.+.
T Consensus        82 ~~~i~h~Aa~~~-~~~~~~~p~~~~~~Nv~gt~~l~~~~~~--~~v~~~i~~ss~~~--~~~~~~~~~~~~~~~~~~~~~  156 (346)
T d1ek6a_          82 FMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATV--YGNPQYLPLDEAHPTGGCTNP  156 (346)
T ss_dssp             EEEEEECCSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSSH
T ss_pred             cccccccccccC-cHhhHhCHHHHHHhhhcccccccchhhh--cCccccccccccee--eeccccccccccccccccCCh
Confidence            778999999752 3334456788899999999999999999  79999999999999  8866544433332   23445


Q ss_pred             h-HHHHHHHHHHHHhcc-cCCCeEEEEEeceEEcCCCcc---------hhhhHHHH-H--HHcCCC---------CCCCC
Q 020254          167 Y-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-M--MFAGGP---------LGSGQ  223 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~--~~~~~~---------~~~~~  223 (328)
                      | ..|...|.....+.. ..+++++++||+.+||+....         ...+++.+ .  ...+.+         ..++.
T Consensus       157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~  236 (346)
T d1ek6a_         157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCC
Confidence            6 667777666554433 358999999999999986421         12233332 2  112222         24567


Q ss_pred             cccccccHHHHHHHHHHHhhCC---CCCceEEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcCcceeeecC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEG  299 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~---~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~  299 (328)
                      +.++++|++|+|+++..++...   ...++|||++++.+++.|+++.+.+.+|.+..+. .|..     .++..     .
T Consensus       237 ~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~-----~~e~~-----~  306 (346)
T d1ek6a_         237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR-----EGDVA-----A  306 (346)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-----TTCCS-----E
T ss_pred             eeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCC-----CCCCC-----E
Confidence            7899999999999988875432   2345999999999999999999999999763321 1110     12222     2


Q ss_pred             cccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          300 QRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       300 ~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      ..++++|+++ |||+|+++ ++|+|+++++
T Consensus       307 ~~~d~~k~~~~lgw~p~~s-lee~I~~~i~  335 (346)
T d1ek6a_         307 CYANPSLAQEELGWTAALG-LDRMCEDLWR  335 (346)
T ss_dssp             ECBCCHHHHHTTCCCCCCC-HHHHHHHHHH
T ss_pred             eeECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            2356677865 89999995 9999999873

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.4e-36  Score=259.87  Aligned_cols=287  Identities=20%  Similarity=0.207  Sum_probs=206.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-------c-CCCCCccccCceeecCChhhHhhcC--CCcEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------I-FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV   93 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~-~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~v   93 (328)
                      |.|||||||||||++|+++|+++||+|+++++.......       . ....   .+..+|+.|.+.+++++.  ++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v---~~~~~Dl~d~~~l~~~~~~~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI---PFYEVDLCDRKGLEKVFKEYKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCC---CEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCC---eEEEeecCCHHHHHHHHhccCCCEE
Confidence            459999999999999999999999999999875432211       0 1111   145679999999988876  89999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc----ccccCCCCC--CCch
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----EVFDESSPS--GNDY  167 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~----~~~~e~~~~--~~~y  167 (328)
                      ||+|+.. ........+.....+|+.++.+++++|++  .+++++|++||.++  ||....    .+.+|+.+.  .+.|
T Consensus        79 ihlAa~~-~~~~~~~~~~~~~~~N~~~t~~ll~~~~~--~~i~~~i~~SS~~v--yg~~~~~~~~~~~~e~~~~~p~~~Y  153 (347)
T d1z45a2          79 IHFAGLK-AVGESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATV--YGDATRFPNMIPIPEECPLGPTNPY  153 (347)
T ss_dssp             EECCSCC-CHHHHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCCGGGSTTCCSBCTTSCCCCCSHH
T ss_pred             EEccccc-cccccccCcccccccchhhhHHHHHHHHh--cccceEEeecceee--ecCcccCCCCCccccccCCCCCChh
Confidence            9999975 32334456678889999999999999999  78999999999999  986543    346666664  3456


Q ss_pred             -HHHHHHHHHHHHhcc--cCCCeEEEEEeceEEcCCCc---------chhhhHHHH-HHH--cCCCC---C------CCC
Q 020254          168 -LAEVCREWEGTALKV--NKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMF--AGGPL---G------SGQ  223 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~--~~~~~---~------~~~  223 (328)
                       .+|...|.....+..  ..+++++++||+++||+...         ....+++.+ ...  .+.++   +      ++.
T Consensus       154 ~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~  233 (347)
T d1z45a2         154 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT  233 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred             HhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCc
Confidence             667776766555433  35899999999999997531         112344433 222  23333   2      344


Q ss_pred             cccccccHHHHHHHHHHHhhCC-------CCCceEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceee
Q 020254          224 QWFSWIHLDDIVNLIYEALSNP-------SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVV  296 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~-------~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~  296 (328)
                      ..++++++.|.+.+++.+++..       ...++||+++++++++.|+++.+.+.+|.+..+......    .++     
T Consensus       234 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----~~~-----  304 (347)
T d1z45a2         234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR----AGD-----  304 (347)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC------------------
T ss_pred             eeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC----CCC-----
Confidence            5678999999999888876531       134599999999999999999999999987433222111    111     


Q ss_pred             ecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          297 LEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       297 ~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      .....++++|+++ |||+|+++ ++|+|+++++
T Consensus       305 ~~~~~~d~sk~~~~lGw~p~~~-lee~i~~ti~  336 (347)
T d1z45a2         305 VLNLTAKPDRAKRELKWQTELQ-VEDSCKDLWK  336 (347)
T ss_dssp             CCCCCBCCHHHHHHTCCCCCCC-HHHHHHHHHH
T ss_pred             CCEeeECHHHHHHHHCCCCCCC-HHHHHHHHHH
Confidence            1234567788865 99999995 9999999873

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.8e-36  Score=259.45  Aligned_cols=293  Identities=16%  Similarity=0.122  Sum_probs=205.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-----cccCCCC-----CccccCceeecCChhhHhhcC--CC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPGK-----KTRFFPGVMIAEEPQWRDCIQ--GS   90 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~--~~   90 (328)
                      +|++||||||||||++|++.|+++||+|++++|..+..     ..+....     ....+...|+.+.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            47899999999999999999999999999999965421     1111000     001123457778888888775  78


Q ss_pred             cEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCC--CC
Q 020254           91 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS--GN  165 (328)
Q Consensus        91 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~  165 (328)
                      |+|||+|+.. ......+.+......|+.++.++++++++.   .....++++.||+.+  |+.. ..+.+|++|.  .+
T Consensus        81 D~Vih~Aa~~-~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~--~~~~-~~~~~E~~~~~p~~  156 (339)
T d1n7ha_          81 DEVYNLAAQS-HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM--FGST-PPPQSETTPFHPRS  156 (339)
T ss_dssp             SEEEECCSCC-CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG--GTTS-CSSBCTTSCCCCCS
T ss_pred             chhhhccccc-cccccccCccccccccccccchhhhhhhhcccccccceeeeeccccee--cccC-CCCCCCCCCCCCcc
Confidence            9999999974 222233567788899999999999998752   122335666666665  6543 4567888875  44


Q ss_pred             ch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcc---hhhhHHHH-HHHcCC-C-C--CCCCcccccccHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-MMFAGG-P-L--GSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~-~~~~~~-~-~--~~~~~~~~~i~v~D~a~  236 (328)
                      .| .+|...|.....+...++++++++||++||||..+.   ...+.... ....+. + +  +++.+.++++|++|+++
T Consensus       157 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~  236 (339)
T d1n7ha_         157 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE  236 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHH
Confidence            67 888888888777777779999999999999996432   12222222 222332 2 2  67889999999999999


Q ss_pred             HHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCCCCC--CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCC
Q 020254          237 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL--PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFP  313 (328)
Q Consensus       237 ~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~  313 (328)
                      ++..++..+. .+.+++..+...+..++++.+.+.+|.....  .+....       ..+........+.+|+++ |||+
T Consensus       237 ~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~d~~Kak~~LGw~  308 (339)
T d1n7ha_         237 AMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEVLGWK  308 (339)
T ss_dssp             HHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHHHCCC
T ss_pred             HHHHHHhcCC-CCccccccccccccchhhhhhhhhhhcccCceeeeccCC-------CCCCCCCeeeECHHHHHHHHCCC
Confidence            9999999875 4567777888899999999999999975211  111100       000111223456788854 8999


Q ss_pred             cccccHHHHHHHhhC
Q 020254          314 FKYRYVKDALKAIMS  328 (328)
Q Consensus       314 p~~~~~~~~l~~~l~  328 (328)
                      |+++ ++++|+++++
T Consensus       309 P~~~-le~gi~~ti~  322 (339)
T d1n7ha_         309 PQVG-FEKLVKMMVD  322 (339)
T ss_dssp             CCSC-HHHHHHHHHH
T ss_pred             cCCC-HHHHHHHHHH
Confidence            9995 9999999873

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2e-35  Score=261.03  Aligned_cols=295  Identities=16%  Similarity=0.155  Sum_probs=201.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-------------cc---cccCC-----CCCccccCceeecCCh
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------------KA---ELIFP-----GKKTRFFPGVMIAEEP   81 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~---~~~~~-----~~~~~~~~~~d~~~~~   81 (328)
                      .|||||||||||||++|+++|++.||+|++++.-..             +.   .....     ......+...|+.|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            379999999999999999999999999999962100             00   00000     0000124567999999


Q ss_pred             hhHhhcC--CCcEEEECCCCCCC--CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCc-EEEEecccceeecCCCcc-
Q 020254           82 QWRDCIQ--GSTAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP-SVLVSATALGYYGTSETE-  155 (328)
Q Consensus        82 ~~~~~~~--~~d~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~v~~Ss~~v~~yg~~~~~-  155 (328)
                      .++++++  ++|+|||+|+....  .......+...++.|+.++.+++++|++  .+.++ +++.||..+  |+..... 
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~~i~~ss~~~--~~~~~~~~  156 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGE--YGTPNIDI  156 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--GCCCSSCB
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHH--hccccceeecccccc--cccccccc
Confidence            9999987  67999999987532  2234455677889999999999999998  55554 566666665  6643211 


Q ss_pred             -----ccc-------CCCC--CCCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch----------------
Q 020254          156 -----VFD-------ESSP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----------------  204 (328)
Q Consensus       156 -----~~~-------e~~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----------------  204 (328)
                           ..+       +..+  +.+.| .+|...|.....+...++++++++||+++||+.....                
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  236 (393)
T d1i24a_         157 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  236 (393)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             ccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence                 111       1112  34467 8888888888888777899999999999999975322                


Q ss_pred             hhhHHHH--HHHcCCCC---CCCCcccccccHHHHHHHHHHHhhCCCCCceEEe--cCCCccCHHHHHHHHHHHhCCCCC
Q 020254          205 AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING--TAPNPVRLAEMCDHLGNVLGRPSW  277 (328)
Q Consensus       205 ~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i--~~~~~~~~~e~~~~i~~~~g~~~~  277 (328)
                      ..++..+  +...++++   +++.+.++++|++|+++++..++++....|.|++  .+++.+++.|+++.+.+..+....
T Consensus       237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~  316 (393)
T d1i24a_         237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGL  316 (393)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTC
T ss_pred             ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCC
Confidence            1123333  44566664   7889999999999999999999998766665544  355678999999999887643210


Q ss_pred             -CCCcHHHHHHHhcCcceeeecCcccCchHHHHCCCCcccccHHHHHHHhh
Q 020254          278 -LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  327 (328)
Q Consensus       278 -~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~p~~~~~~~~l~~~l  327 (328)
                       +.....     ..............+++|+++|||+|+++ +++++++++
T Consensus       317 ~~~~~~~-----~~~~~~~~~~~~~~d~~k~~~LGw~P~~~-~~~~i~~~~  361 (393)
T d1i24a_         317 DVKKMTV-----PNPRVEAEEHYYNAKHTKLMELGLEPHYL-SDSLLDSLL  361 (393)
T ss_dssp             CCCEEEE-----CCSSCSCSSCCCCBCCCHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             Ccceeec-----cCCCCCCCccEecCCHHHHHHcCCccccC-HHHHHHHHH
Confidence             110000     00000011122344567788899999995 999999875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=9.4e-35  Score=255.83  Aligned_cols=289  Identities=16%  Similarity=0.158  Sum_probs=203.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCccccc---C----------------CC--CCccccCceeecCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELI---F----------------PG--KKTRFFPGVMIAEE   80 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~---~----------------~~--~~~~~~~~~d~~~~   80 (328)
                      .|||||||||||||++|+++|++ .||+|+++++-.......   .                ..  .....+...|+.|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            47999999999999999999986 689999997521110000   0                00  00011335688898


Q ss_pred             hhhHhhcC---CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcc--
Q 020254           81 PQWRDCIQ---GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE--  155 (328)
Q Consensus        81 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~--  155 (328)
                      +.++++++   ++|+|||+|+... .......+....+.|+.++.++++++++  .++++++++||+++  |+.....  
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~-~~~~~~~~~~~~~~N~~~t~~~l~~~~~--~~~~~~~~~~s~~~--~~~~~~~~~  156 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLA-VGESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAI--FGNPTMGSV  156 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--TBSCCC---
T ss_pred             HHhhhhhhccceeehhhccccccc-ccccccccccccccccccccccchhhhc--cCCccccccccccc--ccccccccc
Confidence            88888874   6799999999642 2233455677788999999999999999  78999999999988  7654332  


Q ss_pred             -----cccCCCCC--CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcch--------hhhHHHH--HH----
Q 020254          156 -----VFDESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------AKMIPLF--MM----  213 (328)
Q Consensus       156 -----~~~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--------~~~~~~~--~~----  213 (328)
                           +..|+.+.  ...| .+|...|.....+...++++++++||+++|||.....        ..+++.+  +.    
T Consensus       157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~  236 (383)
T d1gy8a_         157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (383)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence                 34454443  4557 7788888888777777799999999999999975321        1122211  00    


Q ss_pred             ------------HcCCC---------CCCCCcccccccHHHHHHHHHHHhhCC---------CCCceEEecCCCccCHHH
Q 020254          214 ------------FAGGP---------LGSGQQWFSWIHLDDIVNLIYEALSNP---------SYRGVINGTAPNPVRLAE  263 (328)
Q Consensus       214 ------------~~~~~---------~~~~~~~~~~i~v~D~a~~~~~~~~~~---------~~~g~~~i~~~~~~~~~e  263 (328)
                                  ..+.+         .+++.+.++++|++|+|++++.+++..         ...++|||++++++++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e  316 (383)
T d1gy8a_         237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (383)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence                        01111         135677899999999999999988631         134599999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHh
Q 020254          264 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAI  326 (328)
Q Consensus       264 ~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~  326 (328)
                      +++.+.+.+|.+..+.....    ..++.     .....+++|+++ |||+|+++ ++|+|+++
T Consensus       317 l~~~i~~~~~~~~~~~~~~~----~~~d~-----~~~~~d~~k~~k~LGw~P~~~-l~e~i~~t  370 (383)
T d1gy8a_         317 VIEVARKTTGHPIPVRECGR----REGDP-----AYLVAASDKAREVLGWKPKYD-TLEAIMET  370 (383)
T ss_dssp             HHHHHHHHHCCCCCEEEECC----CTTCC-----SEECBCCHHHHHHTCCCCSCC-SHHHHHHH
T ss_pred             HHHHHHHHhCCCCceEECCC----CCCCc-----CEeeeCHHHHHHHHCCccCCC-HHHHHHHH
Confidence            99999999997633211110    01121     223446778865 99999996 99999875

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=4.5e-36  Score=253.26  Aligned_cols=270  Identities=14%  Similarity=0.081  Sum_probs=204.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |||||||||||||++|+++|.++||+|++++|+.                 +|+.|.+.++++++  ++|+|||+|+.. 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~-   63 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAHT-   63 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------ccCCCHHHHHHHHHHcCCCEEEeecccc-
Confidence            7899999999999999999999999999998853                 58889999998886  789999999864 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHh
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  180 (328)
                      ........+......|+.....+.+.+..   ....+++.||+.+  |+.....+.+|.+++.+.. +.+.+...+....
T Consensus        64 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~ss~~v--~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~  138 (281)
T d1vl0a_          64 AVDKCEEQYDLAYKINAIGPKNLAAAAYS---VGAEIVQISTDYV--FDGEAKEPITEFDEVNPQSAYGKTKLEGENFVK  138 (281)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHH---HTCEEEEEEEGGG--SCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccchhhccccccccccccccccc---cccccccccccee--eeccccccccccccccchhhhhhhhhHHHHHHH
Confidence            32334455677788999999999998888   4567888899888  8888888888888765443 4443333333332


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCCceEEecCCCcc
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV  259 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~  259 (328)
                        ..+.+++++||+++||++.+....++...  ..+.++ ..++..++++|++|+++++..+++... .|+||+++++.+
T Consensus       139 --~~~~~~~i~R~~~vyG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~~~~~~~~~  213 (281)
T d1vl0a_         139 --ALNPKYYIVRTAWLYGDGNNFVKTMINLG--KTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN-YGTFHCTCKGIC  213 (281)
T ss_dssp             --HHCSSEEEEEECSEESSSSCHHHHHHHHH--HHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC-CEEEECCCBSCE
T ss_pred             --HhCCCccccceeEEeCCCcccccchhhhh--ccCCceeecCCceeccchhhhhhhhhhhhhhhcc-cCceeEeCCCcc
Confidence              24789999999999999875544333322  233332 345688999999999999999998865 689999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          260 RLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       260 ~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      |+.|+++.+.+.+|.+..+ ++|...    .+.... ...+..++++|+++ +||+|+  +|+++|+++|+
T Consensus       214 s~~e~~~~i~~~~g~~~~i~~i~~~~----~~~~a~-rp~~~~ld~~k~~~~~g~~~~--~~~~~l~~~l~  277 (281)
T d1vl0a_         214 SWYDFAVEIFRLTGIDVKVTPCTTEE----FPRPAK-RPKYSVLRNYMLELTTGDITR--EWKESLKEYID  277 (281)
T ss_dssp             EHHHHHHHHHHHHCCCCEEEEECSTT----SCCSSC-CCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhCCCceEEeccHHH----cCCcCC-CccccccCHHHHHHHhCCCCC--CHHHHHHHHHH
Confidence            9999999999999987432 333211    111111 11234568889865 899998  69999999874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=2e-34  Score=249.74  Aligned_cols=294  Identities=17%  Similarity=0.109  Sum_probs=202.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC------CCCccccCceeecCChhhHhhcCCCcEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ...++|||||||||||++|+++|+++||+|++++|+..+...+..      ..........|+.|.+.+.+++.++|+|+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            345799999999999999999999999999999998655432211      00000123358889999999999999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCc--ccccCC------------
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDES------------  160 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~--~~~~e~------------  160 (328)
                      |+++....    ...+...+..|+.++.+++++|.+. .+++++||+||+++..++.+..  ...+|.            
T Consensus        89 ~~a~~~~~----~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  163 (342)
T d1y1pa1          89 HIASVVSF----SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             ECCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             hhcccccc----cccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCCCCCCCcccccccccccccccccc
Confidence            99986422    2335677889999999999999884 4689999999987532222211  112222            


Q ss_pred             ----CCC--CCch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcch---hhhHHHH-HHHcCCCC--CCCCcc
Q 020254          161 ----SPS--GNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPL--GSGQQW  225 (328)
Q Consensus       161 ----~~~--~~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~---~~~~~~~-~~~~~~~~--~~~~~~  225 (328)
                          .+.  ...| .+|...|.....+...  .++.++++||+.+|||..+..   ....... ....+...  ......
T Consensus       164 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  243 (342)
T d1y1pa1         164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP  243 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred             ccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccc
Confidence                221  1236 6777777666555443  367889999999999853221   1122222 33344432  344566


Q ss_pred             cccccHHHHHHHHHHHhhCCCCCceEEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcCcceeeecCcccCc
Q 020254          226 FSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVP  304 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  304 (328)
                      ++++|++|+|++++.+++++...|.|++++++.+++.|+++.+.+.+... .+...|.        ........+...+.
T Consensus       244 ~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~--------~~~~~~~~~~~~s~  315 (342)
T d1y1pa1         244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--------QGQDLSKFDTAPSL  315 (342)
T ss_dssp             EEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--------CCCCCCEECCHHHH
T ss_pred             eeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCc--------cCcccccccchHHH
Confidence            88999999999999999988777888899999999999999999987432 1112221        11111112223344


Q ss_pred             hHHHHCCCCcccccHHHHHHHhhC
Q 020254          305 ARAKELGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       305 ~~~~~lG~~p~~~~~~~~l~~~l~  328 (328)
                      ++++.|||.|.++ ++++|+++++
T Consensus       316 ~~~k~lg~~~~~~-lee~i~d~I~  338 (342)
T d1y1pa1         316 EILKSLGRPGWRS-IEESIKDLVG  338 (342)
T ss_dssp             HHHHHTTCCSCCC-HHHHHHHHHC
T ss_pred             HHHHHcCCCCCcC-HHHHHHHHHH
Confidence            5667899999885 9999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=7.1e-34  Score=247.84  Aligned_cols=294  Identities=18%  Similarity=0.190  Sum_probs=202.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      ..|||||||||||||++|++.|+++||+|++++|+..+...+..   ......+..+|+.|++.+.++++  .+|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            35899999999999999999999999999999998876543211   11111245679999999988886  68999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCC--CCch-HHHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR  173 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~--~~~y-~~k~~~  173 (328)
                      |+.. ........+.....+|+.++.++++++.+  .+..++++.||+++..++.....+.+++.+.  .+.| ..|...
T Consensus        87 aa~~-~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~  163 (356)
T d1rkxa_          87 AAQP-LVRLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA  163 (356)
T ss_dssp             CSCC-CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred             hccc-cccccccCCccccccccccchhhhhhhhc--cccccccccccccccccccccccccccccccCCCCccccccccc
Confidence            9864 22223456788899999999999999998  4555555555555533333444455555553  3445 455444


Q ss_pred             HHHHHHhcc---------cCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHc-CCCC--CCCCcccccccHHHHHHHHHH
Q 020254          174 EWEGTALKV---------NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFA-GGPL--GSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       174 ~~~~~~~~~---------~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~-~~~~--~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +.....+..         .+++.++++||+++|||++.....+++.+ +... +.++  +.+.+.++++|++|+++++..
T Consensus       164 e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~  243 (356)
T d1rkxa_         164 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL  243 (356)
T ss_dssp             HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHH
T ss_pred             hhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhh
Confidence            444332221         24789999999999999875555555543 3333 3332  778889999999999999998


Q ss_pred             HhhCCC-----CCc--eEEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCC
Q 020254          241 ALSNPS-----YRG--VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF  312 (328)
Q Consensus       241 ~~~~~~-----~~g--~~~i~~~~~~~~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~  312 (328)
                      ++..+.     ..+  .++...+..+++.++++.+.+..+....+.......   ..+     .....++.+|+++ |||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~-----~~~~~~d~skak~~LGw  315 (356)
T d1rkxa_         244 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---PHE-----AHYLKLDCSKAKMQLGW  315 (356)
T ss_dssp             HHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------C-----CCCCCBCCHHHHHHHCC
T ss_pred             hhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC---CCC-----cCeeeEcHHHHHHHHCC
Confidence            887533     122  333344567899999999999999764333222211   111     2334567788865 899


Q ss_pred             CcccccHHHHHHHhh
Q 020254          313 PFKYRYVKDALKAIM  327 (328)
Q Consensus       313 ~p~~~~~~~~l~~~l  327 (328)
                      +|+++ ++++|++++
T Consensus       316 ~P~~~-l~egi~~ti  329 (356)
T d1rkxa_         316 HPRWN-LNTTLEYIV  329 (356)
T ss_dssp             CCCCC-HHHHHHHHH
T ss_pred             CcCCC-HHHHHHHHH
Confidence            99995 999999986

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=8.9e-34  Score=245.32  Aligned_cols=289  Identities=17%  Similarity=0.147  Sum_probs=198.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc--c--cCCCCCccccCceeecCChhhHhhcC--CCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--L--IFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   98 (328)
                      ||||||||||||++|+++|+++||+|+++++-.....  .  .........+...|+.|.+.+.++++  ++|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            7999999999999999999999999999975322211  1  00111111255679999999999986  5799999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccc----------------cCCCC
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF----------------DESSP  162 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~----------------~e~~~  162 (328)
                      .. .......++....++|+.++.+|++++.+  .++++++++||++.. |+.....+.                .+.++
T Consensus        82 ~~-~~~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~i~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (338)
T d1orra_          82 QV-AMTTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV-YGDLEQYKYNETETRYTCVDKPNGYDESTQ  157 (338)
T ss_dssp             CC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG-GTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred             cc-cccccccChHHHHHHHHHHHHHHHHhhhc--ccccccccccccccc-cccccccccccccccccccccccCcccCCc
Confidence            75 22233446688899999999999999999  788887777776652 443322211                11222


Q ss_pred             C--CCch-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCc--c----hhhhHHHH-HHH--cCCCC---CCCCcccc
Q 020254          163 S--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--A----LAKMIPLF-MMF--AGGPL---GSGQQWFS  227 (328)
Q Consensus       163 ~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~----~~~~~~~~-~~~--~~~~~---~~~~~~~~  227 (328)
                      .  ...| ..|...+.........++....++|+..+|++...  .    ...++... ...  .+.++   +++.+.++
T Consensus       158 ~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~  237 (338)
T d1orra_         158 LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD  237 (338)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred             cccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEe
Confidence            2  2234 55555566555555567899999999999976531  1    12222222 111  24443   78889999


Q ss_pred             cccHHHHHHHHHHHhhCCC--CCceEEecC--CCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcCcceeeecCccc
Q 020254          228 WIHLDDIVNLIYEALSNPS--YRGVINGTA--PNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRV  302 (328)
Q Consensus       228 ~i~v~D~a~~~~~~~~~~~--~~g~~~i~~--~~~~~~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~  302 (328)
                      ++|++|++++++.+++...  .+++|++..  +..+++.|++..+.+..|.+..+ ..|..     .++     ......
T Consensus       238 ~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-----~~~-----~~~~~~  307 (338)
T d1orra_         238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR-----ESD-----QRVFVA  307 (338)
T ss_dssp             CEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC-----SSC-----CSEECB
T ss_pred             eecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC-----CCC-----cCeeeE
Confidence            9999999999999998743  456899854  46789999999999999976322 11110     111     112345


Q ss_pred             CchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          303 VPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       303 ~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      +++|+++ |||+|+++ ++++|+++++
T Consensus       308 d~~k~~~~Lg~~p~~s-l~e~i~~ti~  333 (338)
T d1orra_         308 DIKKITNAIDWSPKVS-AKDGVQKMYD  333 (338)
T ss_dssp             CCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             CHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            7788864 89999995 9999999873

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-31  Score=226.46  Aligned_cols=279  Identities=14%  Similarity=0.144  Sum_probs=183.0

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccc--cCCCCCccccCceeecCChhhH-h-----hcCCCcEEEEC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQWR-D-----CIQGSTAVVNL   96 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~-~-----~~~~~d~vi~~   96 (328)
                      |||||||||||++|+++|+++|+ +|+++++-......  ...      ....|..+.+.+. .     .+..+++|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD------LNIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT------SCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc------cchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence            89999999999999999999995 79988754332211  111      1223444433322 2     22468999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccC--CCCCCCch-HHHHHH
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE--SSPSGNDY-LAEVCR  173 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e--~~~~~~~y-~~k~~~  173 (328)
                      |+....   ...+.....+.|+.++.++++++..  .++ ++++.||+.+  |+........+  ..++.+.| ..|...
T Consensus        76 aa~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~i-~~v~~ss~~~--~~~~~~~~~~~~~~~~~~~~Y~~~K~~~  147 (307)
T d1eq2a_          76 GACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVYGYSKFLF  147 (307)
T ss_dssp             CSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             cccccc---ccccccccccccccccccccccccc--ccc-cccccccccc--cccccccccccccccccccccccccchh
Confidence            986422   2334567788899999999999998  555 5777777777  55444333333  33455677 888888


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcch---hhhHHHH--HHHcCCC--C--CCCCcccccccHHHHHHHHHHHhhC
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGP--L--GSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~--~--~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      |.....+...++++++++||+++|||.....   ..+...+  ....++.  +  +++...++++|++|+++++..++..
T Consensus       148 e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~  227 (307)
T d1eq2a_         148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  227 (307)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred             hhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhh
Confidence            9888888888899999999999999976322   2222222  2233332  2  6777889999999999999999987


Q ss_pred             CCCCceEEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHH
Q 020254          245 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  321 (328)
Q Consensus       245 ~~~~g~~~i~~~~~~~~~e~~~~i~~~~g~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~  321 (328)
                      +. .+.||+++++..+++|+++.+.+..+....  ++.|+....        ........+.+|+++ +||+|+++ ++|
T Consensus       228 ~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~--------~~~~~~~~d~~k~~~~~~~~p~~s-l~e  297 (307)
T d1eq2a_         228 GV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKG--------RYQAFTQADLTNLRAAGYDKPFKT-VAE  297 (307)
T ss_dssp             CC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCCC-HHH
T ss_pred             cc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCC--------CCceeeecCHHHHHHHHCCCCCCC-HHH
Confidence            64 679999999999999999999887664321  222222111        112223446788865 79999995 999


Q ss_pred             HHHHhhC
Q 020254          322 ALKAIMS  328 (328)
Q Consensus       322 ~l~~~l~  328 (328)
                      +|+++++
T Consensus       298 gi~~~i~  304 (307)
T d1eq2a_         298 GVTEYMA  304 (307)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999873

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.97  E-value=1.6e-31  Score=226.94  Aligned_cols=278  Identities=12%  Similarity=0.079  Sum_probs=187.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  101 (328)
                      |||||||||||||++|++.|.++|+.| +++++..             ....|+.|.+.++++++  ++|+|||+||.. 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~-------------~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~-   65 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHT-   65 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc-------------cccCcCCCHHHHHHHHHHcCCCEEEEecccc-
Confidence            789999999999999999999988755 4555432             12368889999999886  679999999975 


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHh
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  180 (328)
                      ....+...+......|+.++.++++++++  .+ .+++++||+++  |+.....+.+|+.++.+.. +++.+...+....
T Consensus        66 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~~~~ss~~~--~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_          66 AVDKAESEPELAQLLNATSVEAIAKAANE--TG-AWVVHYSTDYV--FPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CHHHHTTCHHHHHHHHTHHHHHHHHHHTT--TT-CEEEEEEEGGG--SCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             cccccccCccccccccccccccchhhhhc--cc-ccccccccccc--ccCCCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence            22334556778889999999999999988  44 57889999988  7777778888888865432 3443344333332


Q ss_pred             cccCCCeEEEEEeceEEc-CCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHhh----CCCCCceEEec
Q 020254          181 KVNKDVRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALS----NPSYRGVINGT  254 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~----~~~~~g~~~i~  254 (328)
                      ..  .....++|++..++ ++......+...  .....++ ..+....+++|+.|+++++..++.    .+...++||++
T Consensus       141 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~  216 (298)
T d1n2sa_         141 DN--CPKHLIFRTSWVYAGKGNNFAKTMLRL--AKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV  216 (298)
T ss_dssp             HH--CSSEEEEEECSEECSSSCCHHHHHHHH--HHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECC
T ss_pred             hh--hcccccccccceeeccCCccchhhhhh--hcccceeecccceeecccccchHHHHHHHHHhhhhcccccccccccc
Confidence            22  23456666666554 444332222222  2233333 345667889999999999888765    33456799999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCC-CCCCcHH--HHHHHhcCcceeeecCcccCchHHHH-CCCCcccccHHHHHHHhhC
Q 020254          255 APNPVRLAEMCDHLGNVLGRPS-WLPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  328 (328)
Q Consensus       255 ~~~~~~~~e~~~~i~~~~g~~~-~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~~~~~~l~~~l~  328 (328)
                      +++.++..++++.+.+..+... ....+..  ........... ...+..++++|+++ +||+|+  +|+++|+++++
T Consensus       217 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~-RP~~~~ld~~K~~~~~~~~~~--~~~~gl~~~i~  291 (298)
T d1n2sa_         217 AGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPAS-RPGNSRLNTEKFQRNFDLILP--QWELGVKRMLT  291 (298)
T ss_dssp             CBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSC-CCSBCCBCCHHHHHHHTCCCC--BHHHHHHHHHH
T ss_pred             CCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCC-CccccccCHHHHHHHHCCCCC--cHHHHHHHHHH
Confidence            9999999999999987665321 1111110  00000000000 11234578899965 899998  69999999873

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=6.6e-29  Score=211.97  Aligned_cols=237  Identities=16%  Similarity=0.169  Sum_probs=163.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc--------CCCCCccccCceeecCChhhHhhcCCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--------FPGKKTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      +++||||||||||||++|+++|+++||+|++++|++......        ....  ......|+.|.+.+.+.+.+++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~--v~~v~~d~~d~~~~~~~~~~~~~~   79 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG--AKLIEASLDDHQRLVDALKQVDVV   79 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTT--CEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCC--cEEEEeecccchhhhhhccCcchh
Confidence            457899999999999999999999999999999986543211        0110  114457888999999999999999


Q ss_pred             EECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHH
Q 020254           94 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCR  173 (328)
Q Consensus        94 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~  173 (328)
                      +++++....            ..|...+.++++++.+  .+..++++.||.++  ++....   .+..+ ...+   ...
T Consensus        80 ~~~~~~~~~------------~~~~~~~~~~l~~a~~--~~~~~~v~~Ss~g~--~~~~~~---~~~~~-~~~~---~~~  136 (312)
T d1qyda_          80 ISALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLPSEFGM--DPDIME---HALQP-GSIT---FID  136 (312)
T ss_dssp             EECCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEECSCCSS--CTTSCC---CCCSS-TTHH---HHH
T ss_pred             hhhhhhccc------------ccchhhhhHHHHHHHH--hcCCcEEEEeeccc--cCCCcc---cccch-hhhh---hHH
Confidence            999875311            2466777888999888  67778888887655  332211   11111 1222   222


Q ss_pred             HHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCCCC-Cc
Q 020254          174 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG  249 (328)
Q Consensus       174 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g  249 (328)
                      +.....+....+++++++||+.+||+.......+..... ..+..   .+++++.+++||++|+|++++.++.++.. ++
T Consensus       137 ~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~  215 (312)
T d1qyda_         137 KRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMM-PPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK  215 (312)
T ss_dssp             HHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSS-CCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSS
T ss_pred             HHHHHHhhcccccceEEeccceeecCCccchhhHHHHhh-hcccccccccccccccceeeHHHHHHHHHHHhcCccccCc
Confidence            222223334468999999999999975432221111110 11111   27788999999999999999999988763 44


Q ss_pred             -eEEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHH
Q 020254          250 -VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFA  284 (328)
Q Consensus       250 -~~~i~~~~~~~~~e~~~~i~~~~g~~-~~~~~p~~~  284 (328)
                       +|++++++.+|++|+++.+.+++|++ ..+.+|...
T Consensus       216 ~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~  252 (312)
T d1qyda_         216 TMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD  252 (312)
T ss_dssp             EEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred             eEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHH
Confidence             56676778899999999999999987 334555443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-27  Score=190.15  Aligned_cols=200  Identities=15%  Similarity=0.096  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      .|+||+||||||+||++++++|+++||+|++++|++.+.........  .+..+|+.|.+++.++++++|+|||++|...
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA--HVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS--EEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccc--ccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            46899999999999999999999999999999999877654433211  2456799999999999999999999998642


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHh
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  180 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  180 (328)
                      ....        .+.+..+++++++++++  .+++++|++||.++  |++....+     +....| ..+...  +..  
T Consensus        80 ~~~~--------~~~~~~~~~~l~~aa~~--~~v~r~i~~ss~~~--~~~~~~~~-----~~~~~~~~~~~~~--e~~--  138 (205)
T d1hdoa_          80 DLSP--------TTVMSEGARNIVAAMKA--HGVDKVVACTSAFL--LWDPTKVP-----PRLQAVTDDHIRM--HKV--  138 (205)
T ss_dssp             CCSC--------CCHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSCTTCSC-----GGGHHHHHHHHHH--HHH--
T ss_pred             chhh--------hhhhHHHHHHHHHHHHh--cCCCeEEEEeeeec--cCCCcccc-----ccccccchHHHHH--HHH--
Confidence            2211        13567789999999999  89999999999887  65433211     111122 222222  222  


Q ss_pred             cccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCc-eEEecC
Q 020254          181 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTA  255 (328)
Q Consensus       181 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~~i~~  255 (328)
                      ....+++|+++||+.+++........           ...++.....+|+++|+|++++.+++++...| .+.++.
T Consensus       139 l~~~~~~~tiirp~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         139 LRESGLKYVAVMPPHIGDQPLTGAYT-----------VTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             HHHTCSEEEEECCSEEECCCCCSCCE-----------EESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             HHhcCCceEEEecceecCCCCcccEE-----------EeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            22369999999999998753211100           01244556778999999999999999887544 565543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=7.4e-29  Score=210.83  Aligned_cols=234  Identities=15%  Similarity=0.150  Sum_probs=159.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-------CCccccCceeecCChhhHhhcCCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------KKTRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ++|||||||||||||+++++.|+++||+|++++|++.........       .....+...|+.+.+.+.+.+++++.|+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            568999999999999999999999999999999987653221100       0000133457778888888889999999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHH
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCRE  174 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~  174 (328)
                      |+++.                .+..++.++++++..  .+++++++.|+.+.  +.       ++.... ..........
T Consensus        82 ~~~~~----------------~~~~~~~~~~~a~~~--~~~~~~~~~s~~~~--~~-------~~~~~~-~~~~~~~~~~  133 (307)
T d1qyca_          82 STVGS----------------LQIESQVNIIKAIKE--VGTVKRFFPSEFGN--DV-------DNVHAV-EPAKSVFEVK  133 (307)
T ss_dssp             ECCCG----------------GGSGGGHHHHHHHHH--HCCCSEEECSCCSS--CT-------TSCCCC-TTHHHHHHHH
T ss_pred             ecccc----------------cccchhhHHHHHHHH--hccccceeeecccc--cc-------cccccc-cccccccccc
Confidence            99864                355667788888888  67888888777543  22       111111 1111111122


Q ss_pred             HHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCC---CCCCCcccccccHHHHHHHHHHHhhCCCC-Cc-
Q 020254          175 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG-  249 (328)
Q Consensus       175 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g-  249 (328)
                      .....+....+++++++||+.+||+....+..+..  ....+..   ++.+++.++++|++|+|++++.++..+.. ++ 
T Consensus       134 ~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  211 (307)
T d1qyca_         134 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL--TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKT  211 (307)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC--SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEE
T ss_pred             ccccchhhccCCCceecccceecCCCccchhhhhh--hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCce
Confidence            22222223358999999999999986433222111  1112222   26788999999999999999999988763 34 


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHH
Q 020254          250 VINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFAL  285 (328)
Q Consensus       250 ~~~i~~~~~~~~~e~~~~i~~~~g~~~-~~~~p~~~~  285 (328)
                      +|++++++.+|+.|+++.+.+++|.+. ...+|.+..
T Consensus       212 ~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~  248 (307)
T d1qyca_         212 LYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEV  248 (307)
T ss_dssp             EECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHH
T ss_pred             eEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHHH
Confidence            567778889999999999999999873 334555433

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.1e-27  Score=191.03  Aligned_cols=207  Identities=16%  Similarity=0.129  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++|+|||||||||||++|+++|+++|  ++|++++|++..........  .....+|+.+.+++.++++++|+|||+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~--i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN--VNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG--CEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccce--eeeeeecccccccccccccccccccccccc
Confidence            45789999999999999999999998  48999999876543322110  012235777788888889999999999985


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTA  179 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~  179 (328)
                      .    ...........+|+.++.+++++|.+  .++++||++||.++  ++...           ..| .+.+.+.|...
T Consensus        91 ~----~~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~fi~~Ss~~~--~~~~~-----------~~Y-~~~K~~~E~~l  150 (232)
T d2bkaa1          91 T----RGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA--DKSSN-----------FLY-LQVKGEVEAKV  150 (232)
T ss_dssp             C----HHHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTTCS-----------SHH-HHHHHHHHHHH
T ss_pred             c----ccccchhhhhhhcccccceeeecccc--cCccccccCCcccc--ccCcc-----------chh-HHHHHHhhhcc
Confidence            3    22345567788999999999999999  78999999999887  54321           234 34444444443


Q ss_pred             hcccCCC-eEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCCCceEEecC
Q 020254          180 LKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  255 (328)
Q Consensus       180 ~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~  255 (328)
                      ..  .++ +++|+||+.+||+....  +....+ ..... .+.........|+++|+|++++.++..+...+.+.+.+
T Consensus       151 ~~--~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         151 EE--LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFG-SLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  223 (232)
T ss_dssp             HT--TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHC-SCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             cc--ccccceEEecCceeecCCCcC--cHHHHHHHHHhh-ccCCcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence            33  355 58999999999986542  122211 11111 22233444567999999999999998877667777654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=9.9e-27  Score=191.58  Aligned_cols=231  Identities=17%  Similarity=0.127  Sum_probs=157.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe--EEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ--VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      .|++|||||||||||+++++.|+++||+  |+.++|++++.........   +...|+.+.+.+.++++++|+|||+++.
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD---VFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTT---EEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcE---EEEeeeccccccccccccceeeEEEEee
Confidence            4689999999999999999999999965  6677888766554443322   5567899999999999999999999986


Q ss_pred             CCCC------------CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254          100 PIGT------------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus       100 ~~~~------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ....            ............+|+.++++++..+..  ...+...+.|+...  +........    .....|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~--~~~~~~~~~----~~~~~~  150 (252)
T d2q46a1          79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG--TNPDHPLNK----LGNGNI  150 (252)
T ss_dssp             CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT--TCTTCGGGG----GGGCCH
T ss_pred             ccccccccchhhhhhcccccccchhhhccccccceeecccccc--cccccccccccccc--CCCCccccc----ccccch
Confidence            4210            111122345567899999999999988  67788888887665  332211100    011112


Q ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCCC
Q 020254          168 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  247 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  247 (328)
                         ...+.....+....+++++++||+++||+.......+.       +..........++||++|+|++++.+++++..
T Consensus       151 ---~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-------~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~  220 (252)
T d2q46a1         151 ---LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLV-------GKDDELLQTDTKTVPRADVAEVCIQALLFEEA  220 (252)
T ss_dssp             ---HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEE-------ESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred             ---hhhhhhhhhhhhcccccceeecceEEECCCcchhhhhh-------ccCcccccCCCCeEEHHHHHHHHHHHhCCccc
Confidence               12222333334446899999999999999754322211       11111123345789999999999999998774


Q ss_pred             Cc-eEEecCCC---ccCHHHHHHHHHHHhC
Q 020254          248 RG-VINGTAPN---PVRLAEMCDHLGNVLG  273 (328)
Q Consensus       248 ~g-~~~i~~~~---~~~~~e~~~~i~~~~g  273 (328)
                      .| +|||+++.   ..++.|+.+.+.++.+
T Consensus       221 ~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         221 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             TTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             cCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            44 99998643   4567788777766554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=7.9e-25  Score=176.07  Aligned_cols=195  Identities=17%  Similarity=0.165  Sum_probs=130.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-CCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~~   99 (328)
                      +|||||||||||||++|+++|+++|+  +|++++|++......         ...+..|..++.+.+ ..+|+|||++|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~---------~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR---------LDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTT---------EECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhccc---------ccccccchhhhhhccccchheeeeeeee
Confidence            58999999999999999999999997  677777765432211         112333444444444 468999999986


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHHH
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTA  179 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~  179 (328)
                      ...   .......+.+.|+.++.+++++|++  .++++++++||.++  ++..           .+.| .+.+.+.|...
T Consensus        73 ~~~---~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~~i~~Ss~~~--~~~~-----------~~~y-~~~K~~~E~~l  133 (212)
T d2a35a1          73 TIK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA--DAKS-----------SIFY-NRVKGELEQAL  133 (212)
T ss_dssp             CHH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTTC-----------SSHH-HHHHHHHHHHH
T ss_pred             ecc---ccccccccccchhhhhhhccccccc--cccccccccccccc--cccc-----------ccch-hHHHHHHhhhc
Confidence            411   2233467889999999999999999  89999999999887  5422           1234 33334444333


Q ss_pred             hcccCCC-eEEEEEeceEEcCCCcchhhhHHHHHHHcCCCC-CCCCcccccccHHHHHHHHHHHhhCCCCCceEEec
Q 020254          180 LKVNKDV-RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT  254 (328)
Q Consensus       180 ~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~  254 (328)
                      ..  .++ +++|+||+.|||+.....  +..    ....++ ......+.+||++|+|++++.++.++. .|.+++.
T Consensus       134 ~~--~~~~~~~I~Rp~~v~G~~~~~~--~~~----~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~-~g~~~~~  201 (212)
T d2a35a1         134 QE--QGWPQLTIARPSLLFGPREEFR--LAE----ILAAPIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVE  201 (212)
T ss_dssp             TT--SCCSEEEEEECCSEESTTSCEE--GGG----GTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEE
T ss_pred             cc--cccccceeeCCcceeCCccccc--HHH----HHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC-CCCEEEE
Confidence            32  355 699999999999975431  110    011222 111234567999999999999998865 5655553

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=1.4e-22  Score=175.43  Aligned_cols=225  Identities=14%  Similarity=0.108  Sum_probs=149.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc--cCCCCCccccCceeecCCh-hhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~vi~~a~   98 (328)
                      ++|+|+|||||||||++|++.|+++||+|++++|++++...  +..... ......|+.|.. .++.++.++|++++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~-v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPN-VTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTT-EEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCC-CEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            46899999999999999999999999999999998765432  111111 113346777755 46778889999988764


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCchHHHHHHHHHHH
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGT  178 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~  178 (328)
                      ..             ...++..+.++++++.+  .++++++++||...  .....      ..+..+.+..|...+..  
T Consensus        81 ~~-------------~~~~~~~~~~~~~aa~~--agv~~~v~~Ss~~~--~~~~~------~~~~~~~~~~k~~~~~~--  135 (350)
T d1xgka_          81 SQ-------------AGDEIAIGKDLADAAKR--AGTIQHYIYSSMPD--HSLYG------PWPAVPMWAPKFTVENY--  135 (350)
T ss_dssp             ST-------------TSCHHHHHHHHHHHHHH--HSCCSEEEEEECCC--GGGTS------SCCCCTTTHHHHHHHHH--
T ss_pred             cc-------------cchhhhhhhHHHHHHHH--hCCCceEEEeeccc--cccCC------cccchhhhhhHHHHHHH--
Confidence            31             01356667899999998  68889989888654  22111      11122233444333322  


Q ss_pred             HhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCC----CCCCCCcccccccH-HHHHHHHHHHhhCCC---CCce
Q 020254          179 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHL-DDIVNLIYEALSNPS---YRGV  250 (328)
Q Consensus       179 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v-~D~a~~~~~~~~~~~---~~g~  250 (328)
                        ....+.+++++||+.+++.................+.    ....++..++++++ +|+++++..++..+.   .+.+
T Consensus       136 --~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~  213 (350)
T d1xgka_         136 --VRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHR  213 (350)
T ss_dssp             --HHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCE
T ss_pred             --HHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeE
Confidence              2235789999999998875321111110000001111    11456677888876 799999999987543   3448


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCC
Q 020254          251 INGTAPNPVRLAEMCDHLGNVLGRP  275 (328)
Q Consensus       251 ~~i~~~~~~~~~e~~~~i~~~~g~~  275 (328)
                      |++++ +.+|+.|+++.+.+++|++
T Consensus       214 ~~~~g-~~~T~~eia~~l~~~~G~~  237 (350)
T d1xgka_         214 IALTF-ETLSPVQVCAAFSRALNRR  237 (350)
T ss_dssp             EEECS-EEECHHHHHHHHHHHHTSC
T ss_pred             EEEeC-CcCCHHHHHHHHHHHHCCc
Confidence            88876 5699999999999999987

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=7.2e-20  Score=149.23  Aligned_cols=220  Identities=19%  Similarity=0.151  Sum_probs=152.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA   97 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a   97 (328)
                      .+.|++|||||++.||+++++.|+++|++|++++|+..+..+............+|+.|.++++++++   ++|++||+|
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            35689999999999999999999999999999999877654443222112244689999999888775   689999999


Q ss_pred             CCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      +....   .....+.++..+++|+.++..+.+++.+.   +....++|++||...  ...         .|....| .+|
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~---------~~~~~~Y~asK  153 (244)
T d1pr9a_          85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS--QRA---------VTNHSVYCSTK  153 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHH
T ss_pred             ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc--ccc---------ccchhhhhhhH
Confidence            97544   24566889999999999988887765441   134568999999765  221         1223457 677


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                      .........++.+   .++++..|.||.|..+..... ...-..-......|++.      +..++|+|.+++.++....
T Consensus       154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R------~~~peevA~~v~fL~S~~a  227 (244)
T d1pr9a_         154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGK------FAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCS------CBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCC------CcCHHHHHHHHHHHhCchh
Confidence            6666666555443   489999999999876521110 01111112223334332      6789999999999886533


Q ss_pred             --CCc-eEEecCCC
Q 020254          247 --YRG-VINGTAPN  257 (328)
Q Consensus       247 --~~g-~~~i~~~~  257 (328)
                        ..| ++.+.+|-
T Consensus       228 ~~itG~~i~vDGG~  241 (244)
T d1pr9a_         228 GMTTGSTLPVEGGF  241 (244)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             CCcCCcEEEECccH
Confidence              344 88887763

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.82  E-value=1.7e-19  Score=146.19  Aligned_cols=211  Identities=15%  Similarity=0.108  Sum_probs=146.9

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      +.+.|++|||||++.||+++++.|+++|++|++++|+........       ...+|+.|+++++++++       ++|+
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-------EEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            346689999999999999999999999999999999876544321       34689999988776653       6899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +||+||....   .+...+.++..+++|+.++..+.+++...  ..+..++|++||...  +..         .+....|
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y  145 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG--LWG---------IGNQANY  145 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh--ccC---------CcccHHH
Confidence            9999997543   34567888999999999987776654432  145668999999765  221         1223457


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|.........++.+   .|+++.++.||.+..+..   ..+....  ......|++.      +..++|+|.+++.+
T Consensus       146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~---~~~~~~~~~~~~~~~pl~R------~~~pedvA~~v~fL  216 (237)
T d1uzma1         146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT---RALDERIQQGALQFIPAKR------VGTPAEVAGVVSFL  216 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHSCHHHHHHHGGGCTTCS------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh---hccCHHHHHHHHhcCCCCC------CcCHHHHHHHHHHH
Confidence             7777666665554443   489999999999876521   1111111  1122233322      57899999999999


Q ss_pred             hhCCC--CCc-eEEecCCC
Q 020254          242 LSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       242 ~~~~~--~~g-~~~i~~~~  257 (328)
                      +....  ..| ++.+.+|-
T Consensus       217 ~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         217 ASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCchhcCCcCCeEEECCCC
Confidence            86533  344 88887763

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.3e-19  Score=147.34  Aligned_cols=217  Identities=21%  Similarity=0.144  Sum_probs=150.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC---CCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~   98 (328)
                      +.|++|||||++.||+++++.|+++|++|++++|+..+..+............+|+.|+++++++++   ++|++||+||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            4689999999999999999999999999999999876644432222112244689999999988876   6899999999


Q ss_pred             CCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254           99 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus        99 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      ....   .....+.++..+++|+.++..+.+++.+.   +....++|++||...  +..         .|....| .+|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~~---------~~~~~~Y~asKa  152 (242)
T d1cyda_          84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA--HVT---------FPNLITYSSTKG  152 (242)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhc--ccc---------CCccccccchHH
Confidence            7544   34567888999999999998888765431   134467899998765  222         1223457 6776


Q ss_pred             HHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch---hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          172 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       172 ~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      ........++.+   +|+++.+|.||.+..+.....   .....  ......|++      -+..++|+|.+++.++...
T Consensus       153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~pl~------R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLR------KFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHSTTS------SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHH--HHHhcCCCC------CCcCHHHHHHHHHHHhCch
Confidence            666666555443   489999999998875421110   11111  112223332      2578999999999988653


Q ss_pred             C--CCc-eEEecCCC
Q 020254          246 S--YRG-VINGTAPN  257 (328)
Q Consensus       246 ~--~~g-~~~i~~~~  257 (328)
                      .  ..| ++.+.+|.
T Consensus       225 s~~itG~~i~vDGG~  239 (242)
T d1cyda_         225 SASTSGGGILVDAGY  239 (242)
T ss_dssp             GTTCCSSEEEESTTG
T ss_pred             hcCcCCceEEeCcch
Confidence            3  344 88887763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=7.3e-19  Score=142.95  Aligned_cols=217  Identities=14%  Similarity=0.088  Sum_probs=150.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|+++||||++.||+++++.|+++|++|++++|+..+..+...... .....+|+.|+++++++++       ++|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            45789999999999999999999999999999998776554433222 1244689999988876653       689999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....   .+...+.++..+++|+.++..+.+++.+.  +.+...++++||.+.  .+          .+....| .
T Consensus        83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~--~~----------~~~~~~Y~a  150 (242)
T d1ulsa_          83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LG----------NLGQANYAA  150 (242)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GC----------CTTCHHHHH
T ss_pred             ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccc--cC----------CCCCcchHH
Confidence            99997543   34566889999999999999888877653  234445666666443  33          1223467 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      +|.........++.+   .|+++..+.||.+-.+-......... -......|++.      +..++|+|.+++.++...
T Consensus       151 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~R------~~~pedia~~v~fL~S~~  223 (242)
T d1ulsa_         151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR-EKAIAATPLGR------AGKPLEVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH-HHHHHTCTTCS------CBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH-HHHHhcCCCCC------CCCHHHHHHHHHHHhchh
Confidence            777666665555443   48999999999998764322211111 12223344432      568899999999998653


Q ss_pred             C--CCc-eEEecCCCc
Q 020254          246 S--YRG-VINGTAPNP  258 (328)
Q Consensus       246 ~--~~g-~~~i~~~~~  258 (328)
                      .  ..| ++.+.+|..
T Consensus       224 s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         224 SSFITGQVLFVDGGRT  239 (242)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hCCCCCcEEEECCCcc
Confidence            3  344 888877753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.6e-19  Score=146.17  Aligned_cols=221  Identities=16%  Similarity=0.068  Sum_probs=152.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|+++||||++.||+++++.|+++|++|++++|+......+...........+|+.|+++++++++       ++|++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4689999999999999999999999999999999876655443322222355689999988877663       689999


Q ss_pred             ECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....    .+...+.++..+++|+.++..+.+++.+. +.+..++|++||...  +..         .+....| .
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~--~~~---------~~~~~~Y~a  153 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG--AIG---------QAQAVPYVA  153 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH--HHC---------CTTCHHHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc--ccc---------ccCcchhHH
Confidence            99996432    24566888999999999998888877653 123368999999765  221         1233467 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch----hhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      +|.....+...++.+   .|+++..|.||.|-.+.....    ......+ ......|++      -+..++|+|.+++.
T Consensus       154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~p~eva~~v~f  227 (250)
T d1ydea1         154 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGAAAVF  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC------CCCCHHHHHHHHHH
Confidence            777666665555443   489999999999865421000    0001111 222333443      26789999999999


Q ss_pred             HhhCCC-CCc-eEEecCCCcc
Q 020254          241 ALSNPS-YRG-VINGTAPNPV  259 (328)
Q Consensus       241 ~~~~~~-~~g-~~~i~~~~~~  259 (328)
                      ++.... ..| ++.+.+|..+
T Consensus       228 L~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         228 LASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHCTTCCSCEEEESTTTTS
T ss_pred             HhCccCCCcCCeEEECCCccc
Confidence            886433 344 8888877543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.79  E-value=3.1e-19  Score=145.07  Aligned_cols=213  Identities=13%  Similarity=0.099  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|++.+........ .......+|+.|+++++++++       ++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            4589999999999999999999999999999999876654433221 111244689999988876663       68999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .+...+.++..+++|+.++..+.+++...  +.+..++|++||...  +...         +....| 
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~~---------~~~~~Y~  153 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG--LAGT---------VACHGYT  153 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------TTBHHHH
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc--cccc---------ccccchh
Confidence            999997544   24456889999999999988888765432  134568999999875  2221         223457 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      .+|.....+...++.+   +|+++..|.||.+..+.......      .....|+      .-+..++|+|.+++.++..
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------~~~~~pl------~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------DIFQTAL------GRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------TCSCCSS------SSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------HHHhccc------cCCCCHHHHHHHHHHHhCh
Confidence            7777776666555543   48999999999887653211100      0011122      2267899999999999864


Q ss_pred             CC--CCc-eEEecCCC
Q 020254          245 PS--YRG-VINGTAPN  257 (328)
Q Consensus       245 ~~--~~g-~~~i~~~~  257 (328)
                      ..  ..| ++.+.+|.
T Consensus       222 ~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhCCCcCCEEEECCCe
Confidence            33  344 88887775

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.79  E-value=4.6e-19  Score=144.61  Aligned_cols=216  Identities=13%  Similarity=0.047  Sum_probs=148.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi   94 (328)
                      +.|++|||||++.||+++++.|+++|++|++.+|+++.........  .....+|+.|.++++++++       ++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            4689999999999999999999999999999999876533221111  1145689999887776653       789999


Q ss_pred             ECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           95 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        95 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      |+||....   .+...++++..+++|+.++..+.+++.+.  +++..++|++||...  +..         .+....| .
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~--~~~---------~~~~~~Y~a  150 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG--LFA---------EQENAAYNA  150 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSB---------CTTBHHHHH
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc--ccc---------ccccchhHH
Confidence            99997544   34466888999999999998888877653  245668999999775  221         1223457 7


Q ss_pred             HHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-------hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      +|.....+...++.+   +|+++.++.||.+-.+.....       .....  ......|++      -+..++|+|.++
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~pl~------R~~~pedia~~v  222 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRR--DWEDLHALR------RLGKPEEVAEAV  222 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CH--HHHTTSTTS------SCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHH--HHHhcCCCC------CCcCHHHHHHHH
Confidence            777666665554443   489999999999865421000       00000  111122221      256899999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCCc
Q 020254          239 YEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      ..++....  ..| ++.+.+|-.
T Consensus       223 ~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         223 LFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCCCCcEEEcCcCcc
Confidence            99986433  344 888887753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.79  E-value=1.4e-18  Score=142.77  Aligned_cols=222  Identities=13%  Similarity=0.021  Sum_probs=148.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.|.++||||++.||+++++.|+++|++|++.+|+..+. ...    ...........+|+.|+++++++++       
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999999986532 111    1111112244689999988876663       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCC-CCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|++||+||....   .+...+++...+++|+.++..+.+++.+.  +.+ ...++++||...  +..         .|
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~--~~~---------~~  153 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE--KIP---------WP  153 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CT
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchh--ccc---------Cc
Confidence            78999999997544   34567888999999999988887765442  133 345888888764  221         22


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|.........++.+   .|+++.+|.||.|..+.......--... ......|++.      +..++|+|++
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R------~~~pediA~~  227 (261)
T d1geea_         154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGY------IGEPEEIAAV  227 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSS------CBCHHHHHHH
T ss_pred             cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCC------CCCHHHHHHH
Confidence            33467 7777666665555443   4899999999998766321100000111 2222333332      5788999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCCCcc
Q 020254          238 IYEALSNPS--YRG-VINGTAPNPV  259 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~~~~  259 (328)
                      ++.++....  ..| ++.+.+|..+
T Consensus       228 v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         228 AAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCCcCCeEEECCCeeC
Confidence            999986533  344 8888887543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=9.9e-19  Score=142.94  Aligned_cols=220  Identities=16%  Similarity=0.066  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|+..+..+....     ........+|+.|+++++++++       +
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999999999987654332211     1111234679999888776653       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .+...+.++..+++|+.++..+.+++.+.  +.+..++|++||.... ....         +..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~-~~~~---------~~~  153 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE-EVTM---------PNI  153 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT-CCCS---------SSC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc-cccC---------ccc
Confidence            9999999997544   23567889999999999998888876653  2456689999986541 1111         122


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|.........++.+   +|+++.++.||.+-.+.......-.... ......|++.      +..++|+|++++
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R------~~~pedvA~~v~  227 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR------TGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS------CBCGGGGHHHHH
T ss_pred             cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCC------CCCHHHHHHHHH
Confidence            357 6777666666555443   4899999999999876432111101111 2233344432      567899999999


Q ss_pred             HHhhCCC--CCc-eEEecCCC
Q 020254          240 EALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .++....  ..| ++.+.+|-
T Consensus       228 fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCCcCcEEEeCcCe
Confidence            9886433  344 88887764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=2.9e-19  Score=145.44  Aligned_cols=216  Identities=15%  Similarity=0.095  Sum_probs=150.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|++....++.... .......+|+.|+++++++++       ++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            4579999999999999999999999999999999876654332211 111134589999888776653       69999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .+...+.+...+++|+.++..+.+++.+.  +++..++|++||...  +...         +....| 
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~--~~~~---------~~~~~Y~  151 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG--TMGN---------GGQANYA  151 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHCC---------TTCHHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh--cCCC---------CCCHHHH
Confidence            999997544   34556888999999999998888877542  145578999999765  2211         223467 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      .+|.........++.+   +|+++.++.||.+-.+..   ..+.+..  ......|++.      +..++|+|.+++.++
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~---~~~~~~~~~~~~~~~pl~R------~~~pedvA~~v~fL~  222 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT---RALSDDQRAGILAQVPAGR------LGGAQEIANAVAFLA  222 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HTSCHHHHHHHHTTCTTSS------CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh---hhhhhhHHHHHHhcCCCCC------CCCHHHHHHHHHHHh
Confidence            7777766666555443   489999999998865421   1111111  2223333322      578999999999998


Q ss_pred             hCCC--CCc-eEEecCCC
Q 020254          243 SNPS--YRG-VINGTAPN  257 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~~  257 (328)
                      ....  ..| ++.+.+|-
T Consensus       223 S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         223 SDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CchhcCCcCCeEEECCCe
Confidence            6533  344 88887774

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.78  E-value=1.7e-18  Score=141.58  Aligned_cols=217  Identities=15%  Similarity=0.098  Sum_probs=146.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+.|+++||||++.||+++++.|+++|++|++.+|+.+......   ..........+|+.|+++++++++       ++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            34589999999999999999999999999999999876543321   111122244689999888776653       78


Q ss_pred             cEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCC-CcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||....   .+...+.+...+++|+.++..+.+++...  +.+. .++|++||...  +-.         .|..
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~--~~~---------~~~~  152 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG--FVG---------DPSL  152 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG--TSC---------CTTC
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce--ecc---------CCCc
Confidence            999999997544   34566888999999999998888876542  1333 37899998764  211         2233


Q ss_pred             Cch-HHHHHHHHHHHHhc-----ccCCCeEEEEEeceEEcCCCcchhhhH-HHH--HHHcCCCCCCCCcccccccHHHHH
Q 020254          165 NDY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGALAKMI-PLF--MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~-----~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ..| .+|.........++     ..+|+++..|.||.+..+..   ..+. ...  ......|++      -+..++|+|
T Consensus       153 ~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~---~~~~~~~~~~~~~~~~pl~------R~~~pedvA  223 (251)
T d1zk4a1         153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV---DDLPGAEEAMSQRTKTPMG------HIGEPNDIA  223 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH---HTSTTHHHHHTSTTTCTTS------SCBCHHHHH
T ss_pred             hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhH---HhcCCHHHHHHHHhCCCCC------CCcCHHHHH
Confidence            467 77766665544333     24589999999999875421   1111 111  111112222      267899999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCCC
Q 020254          236 NLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .+++.++....  ..| ++.+.+|-
T Consensus       224 ~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         224 YICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCCcCcEEEECccc
Confidence            99999886433  344 88887763

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.77  E-value=1.8e-18  Score=141.52  Aligned_cols=217  Identities=14%  Similarity=0.128  Sum_probs=149.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .+.|.+|||||++.||+++++.|+++|++|++++|+.....+..    ..........+|++|+++++++++       +
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            45689999999999999999999999999999999876543321    111122244689999988876653       7


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+|+....   .+...+.+...+++|+.++..+.+++...  +.+..++|++||...  +..         .+..
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~--~~~---------~~~~  156 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG--LTG---------NVGQ  156 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHC---------CTTC
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh--cCC---------CCCC
Confidence            8999999997544   33456889999999999988887765432  145678999999765  221         1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      ..| .+|.....+...++.+   .|+++.+|.||.+-.+..... .....  ......|++.      +..++|+|.+++
T Consensus       157 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~--~~~~~~pl~R------~~~pedvA~~v~  228 (251)
T d2c07a1         157 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPAGR------MGTPEEVANLAC  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTTSS------CBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHH--HHHhcCCCCC------CcCHHHHHHHHH
Confidence            457 7777666666555443   489999999999987643211 11111  2223334332      678999999999


Q ss_pred             HHhhCCC--CCc-eEEecCC
Q 020254          240 EALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~  256 (328)
                      .++....  ..| ++.+.+|
T Consensus       229 fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         229 FLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCcEEEECCC
Confidence            9986543  344 8888776

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.2e-18  Score=142.73  Aligned_cols=218  Identities=15%  Similarity=0.101  Sum_probs=150.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhc-------CC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      .+.|+++||||++.||++++++|+++|++|++.+|+..+..+..    ..........+|+.|++++++++       .+
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999876543322    11112224568999988877665       37


Q ss_pred             CcEEEECCCCCCCC--CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           90 STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        90 ~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +|++||+||.....  +...+.++..+++|+.++..+.+++...  +.+..++|++||...  +..         .+...
T Consensus        89 iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~--~~~---------~~~~~  157 (255)
T d1fmca_          89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--ENK---------NINMT  157 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CTTCH
T ss_pred             CCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccch--hcc---------ccccc
Confidence            99999999975432  4457889999999999988887766542  134557889888764  221         12334


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-c-hhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-A-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  239 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  239 (328)
                      .| .+|.........++.+   +|+++.+|.||.|..+... . ......  ......|++.      +..++|+|.+++
T Consensus       158 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~--~~~~~~pl~R------~g~pedvA~~v~  229 (255)
T d1fmca_         158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPIRR------LGQPQDIANAAL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSSCS------CBCHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHH--HHHhcCCCCC------CcCHHHHHHHHH
Confidence            67 7777766666555443   5899999999998765210 0 011111  2223344432      577899999999


Q ss_pred             HHhhCCC--CCc-eEEecCCC
Q 020254          240 EALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       240 ~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .++....  ..| ++.+.+|.
T Consensus       230 fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         230 FLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCchhcCCcCCEEEECcCc
Confidence            9986433  344 88888875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.77  E-value=2.1e-18  Score=140.66  Aligned_cols=221  Identities=12%  Similarity=0.027  Sum_probs=143.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc--CCCCCccccCceeecCChhhHhhcC-------CCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST   91 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d   91 (328)
                      .+.|.++||||++.||+++++.|+++|++|++.+|++.+....  ...........+|+.|+++++++++       ++|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            3468999999999999999999999999999999987542211  1111112244689999988876653       799


Q ss_pred             EEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           92 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        92 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      ++||+||....   .+...+.++..+++|+.++..+.+++.+.  +++..++|++||...  ...         .+....
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~--~~~---------~~~~~~  151 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY--WLK---------IEAYTH  151 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--GSC---------CSSCHH
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh--ccc---------Cccccc
Confidence            99999997544   24566889999999999988888776542  145578999999765  221         223345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHh
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  242 (328)
                      | .+|.........++.+   .|+++.+|.||.+..+....... -.........    .....-+..++|+|++++.++
T Consensus       152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~----~~~l~r~~~pedvA~~v~fL~  226 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL-SAMFDVLPNM----LQAIPRLQVPLDLTGAAAFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CT----TSSSCSCCCTHHHHHHHHHHT
T ss_pred             chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc-chhHHHHHHH----hccCCCCCCHHHHHHHHHHHh
Confidence            7 7776666665554443   48999999999987763211000 0000000000    001112567899999999998


Q ss_pred             hCCC--CCc-eEEecCCC
Q 020254          243 SNPS--YRG-VINGTAPN  257 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~~  257 (328)
                      ....  ..| ++.+.+|-
T Consensus       227 S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         227 SDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             SGGGTTCCSCEEEESSSC
T ss_pred             CchhcCCcCCeEEECCCE
Confidence            6433  344 88887764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.77  E-value=1.2e-18  Score=142.43  Aligned_cols=217  Identities=15%  Similarity=0.074  Sum_probs=148.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||++.||++++++|+++|++|++++|+..+......... ......+|+.|+++++++++       ++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            45799999999999999999999999999999998766544433221 12245689999988876663       78999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-  167 (328)
                      ||+||....   .....+.++..+++|+.++..+.+++.+.  ..+..++|++||...  +..         .+....| 
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~--~~~---------~~~~~~Y~  152 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG--LMG---------LALTSSYG  152 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTCHHHH
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh--ccc---------ccchhhHH
Confidence            999997544   24556888999999999998888877542  145678999999775  221         1223467 


Q ss_pred             HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcc--cccccHHHHHHHHHHHh
Q 020254          168 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW--FSWIHLDDIVNLIYEAL  242 (328)
Q Consensus       168 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~D~a~~~~~~~  242 (328)
                      .+|.....+...++.+   .|+++.++.||.+..+.       ............ ....+  +-.+.++|+|.+++.++
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-------~~~~~~~~~~~~-~~~~pl~R~g~~PedvA~~v~fL~  224 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TAETGIRQGEGN-YPNTPMGRVGNEPGEIAGAVVKLL  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHTCCCSTTS-CTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc-------chhcCHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHh
Confidence            7777776666555543   48999999999886541       111100000000 01111  11235899999999998


Q ss_pred             hCCC--CCc-eEEecCCC
Q 020254          243 SNPS--YRG-VINGTAPN  257 (328)
Q Consensus       243 ~~~~--~~g-~~~i~~~~  257 (328)
                      ....  ..| ++.+.+|-
T Consensus       225 S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         225 SDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             chhhCCCCCceEEeCCCc
Confidence            6433  344 88888774

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.77  E-value=1e-18  Score=143.47  Aligned_cols=219  Identities=13%  Similarity=0.070  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.++........ .......+|+.|+++++++++       ++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4578999999999999999999999999999999876544332211 111234689999998877663       78999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--C-CCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      ||+||....   .....+.++..+++|+.++..+.+++...  + ....++|++||...  +..         .+....|
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y  152 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAG--RRG---------EALVGVY  152 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTCHHH
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhh--ccc---------cccccch
Confidence            999997543   34456888999999999988888764431  1 23568999999765  221         1223457


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-------------HHHcCCCCCCCCccccccc
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~i~  230 (328)
                       .+|.........++.+   +|+++.+|.||.+-.+...   .+....             ......|++      -+..
T Consensus       153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~~~  223 (256)
T d1k2wa_         153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD---GVDAKFADYENLPRGEKKRQVGAAVPFG------RMGR  223 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH---HHHHHHHHHHTCCTTHHHHHHHHHSTTS------SCBC
T ss_pred             hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh---hhhhhhhhhccCChHHHHHHHHhcCCCC------CCcC
Confidence             6677666666555443   4899999999988877421   111111             111122222      2578


Q ss_pred             HHHHHHHHHHHhhCCC---CCceEEecCCCccC
Q 020254          231 LDDIVNLIYEALSNPS---YRGVINGTAPNPVR  260 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~---~~g~~~i~~~~~~~  260 (328)
                      ++|+|.+++.++....   .+.++.+.+|..++
T Consensus       224 p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         224 AEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            9999999999876433   34488898886553

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.77  E-value=4.2e-18  Score=137.90  Aligned_cols=212  Identities=14%  Similarity=0.043  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~~  100 (328)
                      +.|++|||||++.||+++++.|+++|++|++.+|+.+...+....     +..+|+.+. +.+.+.+.++|++||+||..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~-----~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-----YVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSE-----EEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCc-----EEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            457999999999999999999999999999999987554433221     334676643 34455556899999999975


Q ss_pred             CC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHH
Q 020254          101 IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  174 (328)
Q Consensus       101 ~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  174 (328)
                      ..   .+...+.++..+++|+.++..+.+++.+.  +.+..++|++||...  ....         +....| .+|....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~--~~~~---------~~~~~Y~asKaal~  146 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV--ISPI---------ENLYTSNSARMALT  146 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------TTBHHHHHHHHHHH
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccc--cccc---------cccccchhHHHHHH
Confidence            44   34566888999999999987777766432  145567899998765  2211         122345 5676665


Q ss_pred             HHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC---
Q 020254          175 WEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---  246 (328)
Q Consensus       175 ~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---  246 (328)
                      .....++.+   .|+++.+|.||.+-.+.....  +-...  ......|++      .+..++|+|.+++.++....   
T Consensus       147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~~pl~------R~~~pediA~~v~fL~S~~s~~i  218 (234)
T d1o5ia_         147 GFLKTLSFEVAPYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPMR------RMAKPEEIASVVAFLCSEKASYL  218 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTSTTS------SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHhcccCeEEeecccCccchhhhhhh--cCHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhChhhcCC
Confidence            555444433   489999999999877642110  11111  222233332      26789999999999886433   


Q ss_pred             CCceEEecCCC
Q 020254          247 YRGVINGTAPN  257 (328)
Q Consensus       247 ~~g~~~i~~~~  257 (328)
                      .+.++.+.+|-
T Consensus       219 tG~~i~vDGG~  229 (234)
T d1o5ia_         219 TGQTIVVDGGL  229 (234)
T ss_dssp             CSCEEEESTTC
T ss_pred             cCcEEEECccc
Confidence            34488887763

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.76  E-value=5e-18  Score=139.43  Aligned_cols=219  Identities=13%  Similarity=0.060  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhc-------C-C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------Q-G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~-~   89 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|+..+..+...    .........+|+.|++++++++       . +
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999998765443321    1111123457999888776554       2 4


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .+...+.++..+++|+.++..+.+++...  +.+..++|++||...  ...         .|..
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~~~~  155 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG--ALA---------VPYE  155 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG--TSC---------CTTC
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc--ccc---------cccc
Confidence            8999999997544   34556888999999999988887766542  145668999999765  221         1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-h--hhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A--KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ..| .+|.....+...++.+   +++++.+|.||.|-.+..... .  ..-... ......|++.      +..++|+|.
T Consensus       156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R------~g~pedvA~  229 (259)
T d2ae2a_         156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRR------MGEPKELAA  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCS------CBCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCC------CcCHHHHHH
Confidence            457 6777766666555543   489999999999876521100 0  001111 2223344432      577999999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +++.++....  ..| ++.+.+|-
T Consensus       230 ~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         230 MVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhCCCcCcEEEECCCe
Confidence            9999886433  344 88887764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.75  E-value=3.7e-18  Score=140.51  Aligned_cols=218  Identities=12%  Similarity=0.072  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-cccC----C-CCCccccCceeecCChhhHhhcC-------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      +.|++|||||++.||+++++.|+++|++|++.+|+.... ....    . .........+|+.|+++++++++       
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999986432 1111    0 11111245689999988877663       


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||....   .+...+.+...+++|+.++..+.+++.+.  +.+..++|++||...  +..         .|.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~--~~~---------~~~  151 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG--LVA---------SAN  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc--eec---------cCC
Confidence            68999999997544   34566889999999999988777765442  145568999999875  221         123


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hhhhHHHH----------HHHcCCCCCCCCccccc
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLF----------MMFAGGPLGSGQQWFSW  228 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~  228 (328)
                      ...| .+|.........++.+   .|+++.+|.||.+-.+.... ........          ......|++      -+
T Consensus       152 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~------R~  225 (260)
T d1x1ta1         152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL------QF  225 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC------CC
T ss_pred             cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCC------CC
Confidence            3457 7777766666555443   58999999999987663211 00000000          000111221      26


Q ss_pred             ccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          229 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ..++|+|.+++.++....  ..| ++.+.+|
T Consensus       226 g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            789999999999986533  344 8888776

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.75  E-value=7.6e-18  Score=138.19  Aligned_cols=220  Identities=13%  Similarity=0.070  Sum_probs=149.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC------CCCccccCceeecCChhhHhhc-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCI-------Q   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~-------~   88 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|+..+......      .........+|+.|++++++++       .
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            45799999999999999999999999999999998765432211      1111123457999998887665       3


Q ss_pred             CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|++||+||....    .+...+.++..+++|+.++..+.+++...  ..+..++|++||...  +..         .|
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~~  151 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG--IRG---------IG  151 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSB---------CS
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh--ccC---------CC
Confidence            79999999996432    23467889999999999999888876442  145678999999765  221         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-hh-----hhHHHH-HHHcCCCCCCCCcccccccH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LA-----KMIPLF-MMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~-----~~~~~~-~~~~~~~~~~~~~~~~~i~v  231 (328)
                      ....| .+|.....+...++.+   +|+++.++.||.+..+.... ..     ..-... ......|++.      +..+
T Consensus       152 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R------~~~p  225 (258)
T d1iy8a_         152 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKR------YGEA  225 (258)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCS------CBCH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCC------CcCH
Confidence            23457 7776666665555443   48999999999987652100 00     000011 1222333322      5789


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCCCc
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      +|+|.+++.++....  ..| ++.+.+|..
T Consensus       226 ~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         226 PEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            999999999986533  344 888888754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.75  E-value=9.3e-18  Score=137.65  Aligned_cols=215  Identities=16%  Similarity=0.068  Sum_probs=145.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      |.+|||||++.||++++++|+++|++|++.+|++.+.....    ..........+|+.|+++++++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            34699999999999999999999999999999876544332    111112244689999988876653       7999


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      +||+||....   .+...+.++..+++|+.++..+.+++...   ......++++||...  +..         .|....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~--~~~---------~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG--HVG---------NPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhh--ccc---------Cccccc
Confidence            9999997543   24566888999999999998888775431   123456888888764  221         122345


Q ss_pred             h-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-------------HHHcCCCCCCCCcccccc
Q 020254          167 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~i  229 (328)
                      | .+|.....+...++.+   .|+++.+|.||.+-.+..   ..+....             ......|++      -+.
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~~  221 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW---AEIDRQVSEAAGKPLGYGTAEFAKRITLG------RLS  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH---HHHHHHHHHHHTCCTTHHHHHHHTTCTTC------SCB
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHH---hhhhhhhHhhhcccchhHHHHHHhcCCCC------CCc
Confidence            7 6777666665555433   489999999998865421   1111111             111222322      257


Q ss_pred             cHHHHHHHHHHHhhCCC--CCc-eEEecCCCc
Q 020254          230 HLDDIVNLIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      .++|+|++++.++....  ..| ++.+.+|-.
T Consensus       222 ~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         222 EPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            89999999999886433  344 888877753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.75  E-value=2.6e-17  Score=136.00  Aligned_cols=223  Identities=11%  Similarity=0.051  Sum_probs=149.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC-------CC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      .+.|.+|||||++.||+++++.|+++|++|++++|+..+..+...   ......+..+|+.|+++++++++       ++
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            356899999999999999999999999999999998765433321   11111244679999988877663       78


Q ss_pred             cEEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           91 TAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        91 d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      |++||+||....     .....+.++..+++|+.++..+.+++.+.  +.+..++|++||.... .+..         +.
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~-~~~~---------~~  153 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF-TAGE---------GV  153 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT-CCCT---------TS
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccc-cccc---------cc
Confidence            999999996433     23455788999999999988888776542  2455688999887641 2211         11


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch----hhhHHHHHHHcCCCCCCCCcccccccHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ...| .+|.........++.+   .|+++..|.||.+-.+.....    .............+.+      .+..++|+|
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g------r~~~pedvA  227 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG------TLLRAEDVA  227 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS------CCCCHHHHH
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC------CCcCHHHHH
Confidence            2246 5676666665555443   489999999999987743211    1111111111111211      257899999


Q ss_pred             HHHHHHhhCCC--CCc-eEEecCCCcc
Q 020254          236 NLIYEALSNPS--YRG-VINGTAPNPV  259 (328)
Q Consensus       236 ~~~~~~~~~~~--~~g-~~~i~~~~~~  259 (328)
                      .+++.++....  ..| ++.+.+|-..
T Consensus       228 ~~v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         228 DAVAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhChhhCCccCceEEECcCccc
Confidence            99999986533  344 8888887543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.74  E-value=7.2e-18  Score=138.33  Aligned_cols=217  Identities=15%  Similarity=0.123  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC--------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~--------~   89 (328)
                      +.|++|||||++.||++++++|+++|++|++++|++.+..+...    .........+|+.+.++++++++        .
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999998765433221    11111234689998887765542        4


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      .|+++|+|+....   .+...+.+...+++|+.++..+.+++...  .....++|++||...  ...         .+..
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~--~~~---------~~~~  153 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG--FSA---------LPSV  153 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG--TSC---------CTTC
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccc--ccc---------cccc
Confidence            7999999997654   34567889999999999998888766532  145678999999875  221         2233


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-------hhhHHHHHHHcCCCCCCCCcccccccHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                      ..| .+|...+.+...++.+   .|+++.+|.||.+..+.....       .....  ......|++.      +...+|
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~--~~~~~~plgR------~~~ped  225 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEID--NFIVKTPMGR------AGKPQE  225 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHH--HHHHHSTTCS------CBCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHH--HHHhcCCCCC------CcCHHH
Confidence            456 6776666666555443   489999999999987632110       11111  1112223322      689999


Q ss_pred             HHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          234 IVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       234 ~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +|.+++.++....  ..| .+.+.+|-
T Consensus       226 iA~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         226 VSALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence            9999999996433  345 78887764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.74  E-value=9.7e-18  Score=137.87  Aligned_cols=218  Identities=14%  Similarity=0.080  Sum_probs=147.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-------CC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS   90 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~   90 (328)
                      +.|+++||||++.||+++++.|++.|++|++++|+........    ..........+|+.|+++++++++       ++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4579999999999999999999999999999999876543322    112122244689999888776663       78


Q ss_pred             cEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           91 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        91 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      |++||+||....    .+...+.+...+++|+.++..+.+++.+.  +.+..++|++||...  +...         |..
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~--~~~~---------~~~  152 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG--VKGP---------PNM  152 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HSCC---------TTB
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh--ccCC---------cch
Confidence            999999996432    24567889999999999988888876542  145678999999765  3221         223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-------------hhhhHHHH--HHHcCCCCCCCCcc
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-------------LAKMIPLF--MMFAGGPLGSGQQW  225 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~~  225 (328)
                      ..| .+|.........++.+   +|+++..+.||.|-.+....             ........  ......|++     
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-----  227 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-----  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC-----
Confidence            457 7776666665555443   48999999999987762100             00000000  111222332     


Q ss_pred             cccccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          226 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       226 ~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                       -+..++|+|.+++.++....  ..| ++.+.+|
T Consensus       228 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 -RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             25678999999999987533  334 7777654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.74  E-value=9e-18  Score=136.58  Aligned_cols=213  Identities=15%  Similarity=0.095  Sum_probs=144.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-cccccCC----CCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      -||||||++.||++++++|+++|++|++.+++.. .......    .........+|+.|+++++++++       ++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            6899999999999999999999999988765543 2222211    11111244689999988876653       7899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  167 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y  167 (328)
                      +||+|+....   .+...+.++..+++|+.++..+.+++.+.  +++..++|++||...  +-.         .+....|
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~--~~~---------~~~~~~Y  151 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG--LIG---------NIGQANY  151 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHC---------CTTCHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh--cCC---------CCCCHHH
Confidence            9999997544   34567889999999999988887776542  145678999999765  221         1223467


Q ss_pred             -HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          168 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       168 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                       .+|.....+...++.+   +|+++.++.||.+-.+.   ...+.+..  ......|++.      +..++|+|+++..+
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~---~~~~~~~~~~~~~~~~pl~R------~~~p~dvA~~v~fL  222 (244)
T d1edoa_         152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM---TAKLGEDMEKKILGTIPLGR------TGQPENVAGLVEFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH---HHTTCHHHHHHHHTSCTTCS------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHH---HHHhhHHHHHHHHhcCCCCC------CcCHHHHHHHHHHH
Confidence             7777776666555544   48999999999886542   11121211  2222333322      57899999999998


Q ss_pred             hhCCC---CCc-eEEecCCC
Q 020254          242 LSNPS---YRG-VINGTAPN  257 (328)
Q Consensus       242 ~~~~~---~~g-~~~i~~~~  257 (328)
                      ...+.   ..| ++.+.+|-
T Consensus       223 a~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         223 ALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTT
T ss_pred             HCCchhcCCcCCeEEeCCCe
Confidence            64433   344 88887763

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=3.2e-18  Score=140.51  Aligned_cols=218  Identities=14%  Similarity=0.116  Sum_probs=136.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC--------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~--------~   89 (328)
                      +.|+++||||++.||.++++.|++.|++|++++|+..+..+...    .........+|+.++++++++++        .
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999998765443321    11111234578988887765542        4


Q ss_pred             CcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||....   .+...++++..+++|+.++..+.+++...  ..+..++|++||...  ...         .+..
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~--~~~---------~~~~  155 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG--VVS---------ASVG  155 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------C
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc--ccc---------cccc
Confidence            8999999997543   34567889999999999988887766542  145578999999764  211         1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccccHHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI  238 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~  238 (328)
                      ..| .+|.........++.+   .|+++.+|.||.+-.+.....  .....  ......|++      -+..++|+|.++
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~pl~------R~~~pedvA~~v  227 (259)
T d1xq1a_         156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKPLG------RFGEPEEVSSLV  227 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHH
T ss_pred             ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh--chHHHHHHHHhCCCCC------CCcCHHHHHHHH
Confidence            567 7777666665554443   489999999999876632110  00000  001111221      256789999999


Q ss_pred             HHHhhCCC--CCc-eEEecCCCc
Q 020254          239 YEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       239 ~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      +.++....  ..| ++.+.+|-.
T Consensus       228 ~fL~S~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         228 AFLCMPAASYITGQTICVDGGLT  250 (259)
T ss_dssp             HHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHhCchhcCCcCcEEEeCCCEE
Confidence            99886432  334 777777643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.73  E-value=8.7e-18  Score=137.42  Aligned_cols=220  Identities=13%  Similarity=0.061  Sum_probs=146.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||++.||.++++.|+++|++|++.+|+.....+..... .......+|+.|.++++++++       ++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            4589999999999999999999999999999999876544332211 111244679998887776653       78999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      ||+||....   .+...+.++..+++|+.++..+.+++.+. +....++|++||...  +..         .+....| .
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~--~~~---------~~~~~~Y~a  153 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS--WLP---------IEQYAGYSA  153 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh--hcC---------ccccccccc
Confidence            999997543   34556888999999999988887776653 234478999999765  221         1223457 6


Q ss_pred             HHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcc-h-hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHH
Q 020254          169 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  241 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  241 (328)
                      +|.....+...++.+     +++++..+.||.+..+.... . .....  ......+  .....-.+..++|+|++++.+
T Consensus       154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~~~--~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--EMVLHDP--KLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--HHHBCBT--TTBTTCCEECHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH--HHHHhCc--cccccCCCCCHHHHHHHHHHH
Confidence            776666665544432     35999999999987652100 0 00000  0011111  000111367889999999999


Q ss_pred             hhCCC--CCc-eEEecCC
Q 020254          242 LSNPS--YRG-VINGTAP  256 (328)
Q Consensus       242 ~~~~~--~~g-~~~i~~~  256 (328)
                      +....  ..| ++++.+|
T Consensus       230 ~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         230 ASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HSGGGTTCCSCEEEESSS
T ss_pred             hChhhCCCcCcEEEECcc
Confidence            86433  344 8888766

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.73  E-value=1.1e-17  Score=135.86  Aligned_cols=216  Identities=17%  Similarity=0.137  Sum_probs=144.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhcC-------CCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v   93 (328)
                      +.|+++||||++.||.++++.|+++|++|++.+|+..+..+..... .......+|+.++++++++++       ++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            4589999999999999999999999999999999987654443322 122245689999988876653       69999


Q ss_pred             EECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           94 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        94 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      ||+|+....   .+...+.+...+++|+.++..+.+++.......+.++.+||.+.  ...          |....| .+
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~--~~~----------~~~~~Y~~s  151 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG--LGA----------FGLAHYAAG  151 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT--CCH----------HHHHHHHHC
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccc--ccc----------cCccccchh
Confidence            999986543   34556788899999999999999987764233334444444332  111          112235 55


Q ss_pred             HHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHH-H-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          170 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       170 k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      |...+.....++.+   .|+++.++.||.+-.+..   ..+.+. . ......|++.      +..++|+|++++.++..
T Consensus       152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~---~~~~~~~~~~~~~~~p~~r------~~~p~dva~~v~fL~S~  222 (241)
T d2a4ka1         152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT---AGLPPWAWEQEVGASPLGR------AGRPEEVAQAALFLLSE  222 (241)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG---TTSCHHHHHHHHHTSTTCS------CBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH---HhhhHhHHHHHHhCCCCCC------CcCHHHHHHHHHHHhcc
Confidence            66666665555443   479999999999865421   111111 1 2223334322      57899999999999975


Q ss_pred             CC--CCc-eEEecCCCc
Q 020254          245 PS--YRG-VINGTAPNP  258 (328)
Q Consensus       245 ~~--~~g-~~~i~~~~~  258 (328)
                      ..  ..| ++.+.+|..
T Consensus       223 ~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         223 ESAYITGQALYVDGGRS  239 (241)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             hhCCCcCceEEeCCCcc
Confidence            33  344 888877753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.73  E-value=2.2e-17  Score=133.97  Aligned_cols=195  Identities=15%  Similarity=0.104  Sum_probs=138.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCe-------EEEEecCCCcccccC----CCCCccccCceeecCChhhHhhcC-----
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQ-------VRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      -||||||++.||+++++.|+++|++       |+..+|+.....+..    ..........+|+.|.++++++++     
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3799999999999999999999987       888999876544332    222222244679999988776653     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                        ++|++||+||....   .+...+.++..+++|+.++..+.+++...  +.+..++|++||...  +..         .
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~  151 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA--TKA---------F  151 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------C
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh--cCC---------C
Confidence              68999999997544   34557888999999999988887776542  145568999999775  322         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      |....| .+|.........++.+   .|+++..+.||.+-.+-....                .......+..++|+|++
T Consensus       152 ~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~----------------~~~~~~~~~~PedvA~~  215 (240)
T d2bd0a1         152 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----------------DDEMQALMMMPEDIAAP  215 (240)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC----------------CSTTGGGSBCHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc----------------CHhhHhcCCCHHHHHHH
Confidence            223457 7776666655544333   589999999999876632111                01112235678999999


Q ss_pred             HHHHhhCCC
Q 020254          238 IYEALSNPS  246 (328)
Q Consensus       238 ~~~~~~~~~  246 (328)
                      ++.++.++.
T Consensus       216 v~~l~s~~~  224 (240)
T d2bd0a1         216 VVQAYLQPS  224 (240)
T ss_dssp             HHHHHTSCT
T ss_pred             HHHHHcCCc
Confidence            999998765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-17  Score=136.19  Aligned_cols=220  Identities=11%  Similarity=0.003  Sum_probs=146.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh---cCCCcEEEECC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLA   97 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~d~vi~~a   97 (328)
                      .+.|++|||||++.||+++++.|+++|++|++++|++.+..+....... ....+|+.+.+.++..   +.++|++||++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGI-QTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTE-EEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCC-ceeeeeccccccccccccccccceeEEecc
Confidence            4568999999999999999999999999999999998766655443220 0112344444444333   35899999999


Q ss_pred             CCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHH
Q 020254           98 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  171 (328)
Q Consensus        98 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~  171 (328)
                      |....   .+...+.+...+++|+.++..+.+++...  ..+..++|++||......+          .+....| .+|.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----------~~~~~~Y~~sKa  152 (245)
T d2ag5a1          83 GFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTKA  152 (245)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHHH
T ss_pred             cccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCC----------ccchhHHHHHHH
Confidence            97655   23456888999999999999888876642  1345689999886431111          1223456 7777


Q ss_pred             HHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh----hhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          172 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA----KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       172 ~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      ..+.....++.+   +|+++.+|.||.+-.+......    ...... ......|++      -+..++|+++++..++.
T Consensus       153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedva~~v~fL~s  226 (245)
T d2ag5a1         153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG------RFATAEEIAMLCVYLAS  226 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS------SCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhC
Confidence            676666555554   4899999999999876321100    000011 122233332      26789999999999997


Q ss_pred             CCC--CCc-eEEecCCC
Q 020254          244 NPS--YRG-VINGTAPN  257 (328)
Q Consensus       244 ~~~--~~g-~~~i~~~~  257 (328)
                      ...  ..| ++.+.+|.
T Consensus       227 ~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         227 DESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             GGGTTCCSCEEEECTTG
T ss_pred             hhhCCCcCceEEeCCCc
Confidence            543  344 88887764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.73  E-value=1.8e-17  Score=136.14  Aligned_cols=216  Identities=16%  Similarity=0.172  Sum_probs=147.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------CCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   92 (328)
                      |.+|||||++.||.++++.|+++|++|++.+|++....+...    .........+|+.|+++++++++       ++|+
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            567999999999999999999999999999998765433221    11112245689999988876653       6899


Q ss_pred             EEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC----CCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           93 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        93 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      +||+||....   .+...+.++..+++|+.++..+.+++.+.    +.+..++|++||...  +..         .+...
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~--~~~---------~~~~~  151 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG--KQG---------VVHAA  151 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGG--TSC---------CTTCH
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccc--ccc---------cccch
Confidence            9999997544   34567889999999999999999988652    124457888888764  221         12234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhh--------hHH-HH-HHHcCCCCCCCCcccccccH
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--------MIP-LF-MMFAGGPLGSGQQWFSWIHL  231 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~--------~~~-~~-~~~~~~~~~~~~~~~~~i~v  231 (328)
                      .| .+|.....+...++.+   +|+++.++.||.|-.+.......        ..+ .. ......|++.      +..+
T Consensus       152 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR------~~~p  225 (257)
T d2rhca1         152 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR------YVQP  225 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSS------CBCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCC------CcCH
Confidence            57 7777776666555554   47999999999986542110000        000 01 1222333332      6789


Q ss_pred             HHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          232 DDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       232 ~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      +|+|.+++.++....  ..| ++.+.+|
T Consensus       226 edia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         226 SEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            999999999986433  344 8888776

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.3e-17  Score=139.46  Aligned_cols=222  Identities=15%  Similarity=0.094  Sum_probs=147.7

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC---------CCCccccCceeecCChhhHhhcC-
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCIQ-   88 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~-   88 (328)
                      ...+.|+++||||++.||+++++.|++.|++|++++|+..+......         .........+|+.|+++++++++ 
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999998765332210         11111234579999988876653 


Q ss_pred             ------CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccc
Q 020254           89 ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        89 ------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                            ++|++||+|+....   .....+.++..+++|+.++..+.+++.+.  ..+...+|++|+++.  .+       
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~--~~-------  158 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AG-------  158 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TC-------
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc--cc-------
Confidence                  78999999997543   34556889999999999998888876542  134456777766443  11       


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCc-chhhhHHHH--HHHcCCCCCCCCccccccc
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF--MMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~i~  230 (328)
                         .|....| .+|.....+...++.+   .|+++.+|.||.|..+... ......+..  ......|++      -+..
T Consensus       159 ---~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg------R~g~  229 (297)
T d1yxma1         159 ---FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK------RIGV  229 (297)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS------SCBC
T ss_pred             ---ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC------CCcC
Confidence               1223456 6777666666555544   4899999999999776321 010111100  111112222      2567


Q ss_pred             HHHHHHHHHHHhhCCC--CCc-eEEecCCCc
Q 020254          231 LDDIVNLIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      ++|+|.+++.++....  ..| ++.+.+|..
T Consensus       230 pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         230 PEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             THHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence            8999999999986533  344 888888753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.72  E-value=2.7e-17  Score=134.62  Aligned_cols=215  Identities=14%  Similarity=0.065  Sum_probs=147.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-------CCcEEEECC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVNLA   97 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a   97 (328)
                      ++|||||++.||+++++.|+++|++|++.+|+.....++....  ..+..+|+.+.++++++++       ++|++||+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~--~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh--CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6899999999999999999999999999999876654432211  1245689998887766553       789999999


Q ss_pred             CCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHH
Q 020254           98 GTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  170 (328)
Q Consensus        98 ~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k  170 (328)
                      |....    .+...++++..+++|+.++..+.+++.+.  +.+..++|++||...  +...         +....| .+|
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~--~~~~---------~~~~~Y~asK  148 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP--FGPW---------KELSTYTSAR  148 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT--TSCC---------TTCHHHHHHH
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc--cccc---------cccccccccc
Confidence            86422    23556788899999999988877765442  145578999999765  3321         223457 777


Q ss_pred             HHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchh-----hhHH-HH-HHHcCCCCCCCCcccccccHHHHHHHHHH
Q 020254          171 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-----KMIP-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  240 (328)
Q Consensus       171 ~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-----~~~~-~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  240 (328)
                      .....+...++.+   +|+++.+|.||.+-.+......     ...+ .. ......|++.      +...+|+|.+++.
T Consensus       149 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R------~g~pedvA~~v~f  222 (252)
T d1zmta1         149 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR------LGTQKELGELVAF  222 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSS------CBCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCC------CcCHHHHHHHHHH
Confidence            7666665555443   4899999999999876422110     0001 11 1122233332      5789999999999


Q ss_pred             HhhCCC---CCceEEecCCCc
Q 020254          241 ALSNPS---YRGVINGTAPNP  258 (328)
Q Consensus       241 ~~~~~~---~~g~~~i~~~~~  258 (328)
                      ++....   .+.++.+.+|-.
T Consensus       223 L~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         223 LASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHTTSCGGGTTCEEEESTTCC
T ss_pred             HhCchhcCCcCCeEEECCCce
Confidence            987654   344888888753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.72  E-value=1.3e-16  Score=132.15  Aligned_cols=224  Identities=14%  Similarity=0.023  Sum_probs=149.6

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-----cCCCCCccccCceeecCChhhHhhcC----
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPGKKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      +.+.+.|++|||||++.||+++++.|+++|++|++++|+..+..+     ............+|+.|++++.+.++    
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            344566899999999999999999999999999999888654211     11111112244579999887776653    


Q ss_pred             ---CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 ---GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ---~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                         ++|++||+++.....   ....+.+...+++|+.++..+.+++........++++++|.... .+.         .+
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~-~~~---------~~  162 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ-AKA---------VP  162 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT-CSS---------CS
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc-ccc---------cc
Confidence               789999999975442   45567888999999999999999888743334577788775431 111         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC------------cchhhhHHHHHHHcCCCCCCCCccc
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG------------GALAKMIPLFMMFAGGPLGSGQQWF  226 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~  226 (328)
                      ....| .+|...+.....++.+   .|+++..|.||.+-.+..            ................|++.     
T Consensus       163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR-----  237 (272)
T d1g0oa_         163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR-----  237 (272)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS-----
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCC-----
Confidence            23446 6676665555444443   489999999999875410            00011111112233444432     


Q ss_pred             ccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          227 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       227 ~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                       +...+|+|.+++.++....  ..| +..+.+|.
T Consensus       238 -~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         238 -VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             -CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -CcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence             6889999999999987543  344 88887774

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4e-18  Score=139.76  Aligned_cols=217  Identities=16%  Similarity=0.070  Sum_probs=143.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CC--CCccccCceeecCChhhHhhcC-------C
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      .|.+|||||++.||+++++.|+++|++|++++|+.++..+..    ..  ........+|+.|+++++++++       +
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999876533221    11  1111234679999988876663       7


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC----C-CCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES----P-EGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+|+...     ..+++..+++|+.++..+..++.+.    + ....++|++||...  +-+         .+..
T Consensus        83 iDilVnnAg~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~--~~~---------~~~~  146 (254)
T d2gdza1          83 LDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMP---------VAQQ  146 (254)
T ss_dssp             CCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSC---------CTTC
T ss_pred             cCeecccccccc-----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh--ccC---------CCCc
Confidence            899999999742     3457888999998877766665432    1 12346999999764  221         2223


Q ss_pred             Cch-HHHHHHHHHHHH--h---cccCCCeEEEEEeceEEcCCCcc---------hhhhHHHHHHHcCCCCCCCCcccccc
Q 020254          165 NDY-LAEVCREWEGTA--L---KVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLFMMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~--~---~~~~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (328)
                      ..| .+|.....+...  +   ....|+++.+|.||.|-.+-...         .......+.  ...|+      ..+.
T Consensus       147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~~~p~------~r~~  218 (254)
T d2gdza1         147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK--DMIKY------YGIL  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH--HHHHH------HCCB
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHH--hcCCC------CCCc
Confidence            457 677666555432  1   12358999999999986541100         000111110  00011      1256


Q ss_pred             cHHHHHHHHHHHhhCCCCCc-eEEecCCCccCHHH
Q 020254          230 HLDDIVNLIYEALSNPSYRG-VINGTAPNPVRLAE  263 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~~~g-~~~i~~~~~~~~~e  263 (328)
                      .++|+|++++.++.++...| ++.+.+|..+.++|
T Consensus       219 ~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         219 DPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             CHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            78999999999998766455 99998887766544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=2.7e-17  Score=135.17  Aligned_cols=221  Identities=15%  Similarity=0.053  Sum_probs=143.8

Q ss_pred             cCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      .+.|++|||||+|  .||++++++|+++|++|++.+|++.......   ..........+|+.|+++++++++       
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            3568999999998  7999999999999999998888754322211   111111244679999888776653       


Q ss_pred             CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      ++|++||+|+....       .+....++...+++|+.++..+..++........++|++||...  ...         .
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~--~~~---------~  154 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS--EKV---------V  154 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG--TSB---------C
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh--cCC---------C
Confidence            68999999986421       23445677889999999999999887764223457999998765  221         1


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      |....| .+|.........++.+   +|+++.++.||.+..+........-... ......|++.      +..++|+|.
T Consensus       155 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R------~~~pedvA~  228 (256)
T d1ulua_         155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR------NITQEEVGN  228 (256)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSS------CCCHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCC------CcCHHHHHH
Confidence            233457 6777666665555443   4899999999998876432211111111 1222233322      567899999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCCc
Q 020254          237 LIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      +++.++....  ..| ++.+.+|..
T Consensus       229 ~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         229 LGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhCCccCCeEEECcCEe
Confidence            9999987533  344 888877753

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.72  E-value=2.1e-17  Score=135.94  Aligned_cols=226  Identities=14%  Similarity=0.076  Sum_probs=148.0

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhcC------
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      ..+.|++|||||++.||.++++.|+++|++|++++|+..+..+....     ........+|+.|+++++++++      
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            44568999999999999999999999999999999998765432211     1111245689999988876663      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           89 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        89 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                       ++|++||+|+....   .+...+.++..+++|+.++..+.+++.+.   +.....++..||...  +......  -...
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~--~~~~~~~--~~~~  161 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQSS--LNGS  161 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCCEEE--TTEE
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccc--ccccccc--cccC
Confidence             68999999997543   34566788999999999988877765432   134445555555443  2211110  0112


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      +....| .+|.........++.+   .|+++.+|.||.+-.+..... .....  ......|++.      +..++|+|.
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~R------~g~pedvA~  233 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPLNR------FAQPEEMTG  233 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTTSS------CBCGGGGHH
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHH--HHHhcCCCCC------CcCHHHHHH
Confidence            233467 7777666665555433   489999999999976532211 11111  2223334332      567899999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      +++.++....  ..| ++.+.+|.
T Consensus       234 ~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         234 QAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhcchhCCCcCceEEECCCe
Confidence            9999886433  344 88887775

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.71  E-value=2.1e-17  Score=136.28  Aligned_cols=221  Identities=18%  Similarity=0.145  Sum_probs=142.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-------CCccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------KKTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      +.|.+|||||++.||++++++|+++|++|++++|+..+..+....       ........+|+.|+++++++++      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999987654332211       0111234579999888876663      


Q ss_pred             -CCcEEEECCCCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                       ++|++||+||....       .....+.++..+++|+.++..+.+++.+. +.+...+|.++|+..+..+         
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~---------  154 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA---------  154 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC---------
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc---------
Confidence             78999999996421       12245678899999999988887776652 1233567777775432122         


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-------hhhHHHH-HHHcCCCCCCCCcccc
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-------AKMIPLF-MMFAGGPLGSGQQWFS  227 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~  227 (328)
                       .|....| .+|.....+...++.+   +|+++..|.||.|-.+.....       ....... ......|++.      
T Consensus       155 -~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R------  227 (264)
T d1spxa_         155 -TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV------  227 (264)
T ss_dssp             -CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS------
T ss_pred             -CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCC------
Confidence             1223457 6777666665555443   489999999999976532110       1111111 1122233322      


Q ss_pred             cccHHHHHHHHHHHhhCC--C-CCc-eEEecCCCc
Q 020254          228 WIHLDDIVNLIYEALSNP--S-YRG-VINGTAPNP  258 (328)
Q Consensus       228 ~i~v~D~a~~~~~~~~~~--~-~~g-~~~i~~~~~  258 (328)
                      +..++|+|.+++.++..+  . ..| ++.+.+|..
T Consensus       228 ~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         228 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            577899999999988532  2 344 888877753

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1e-16  Score=131.35  Aligned_cols=212  Identities=16%  Similarity=0.074  Sum_probs=140.6

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC--CccccCceeecCChhhHhhcC---
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCIQ---   88 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~d~~~~~~~~~~~~---   88 (328)
                      |...+.|.+|||||++.||.++++.|+++|++|++.+|+..+..+...    ..  .......+|+.++++++++++   
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            455667899999999999999999999999999999998765443321    11  111234689999988776653   


Q ss_pred             ----CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHh----cCCCCCCcEEEEecccceeecCCCcccc
Q 020254           89 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        89 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                          ++|++||+|+....   .+...+.+...++.|+.++..+..++.    +.+....++|++||.+.  +...+.   
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~~p~---  159 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG--HRVLPL---  159 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG--TSCCSC---
T ss_pred             HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHh--cCCCCC---
Confidence                79999999997543   346678899999999999888766653    32223568999999764  221111   


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhc-----ccCCCeEEEEEeceEEcCCCcch-hhhHHHHHHHcCCCCCCCCccccccc
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIH  230 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~-----~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (328)
                          +....| .+|.........++     ...++++.++.||.+-.+..... ........  ...|+      ..+..
T Consensus       160 ----~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~--~~~~~------~r~~~  227 (257)
T d1xg5a_         160 ----SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA--ATYEQ------MKCLK  227 (257)
T ss_dssp             ----GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH--HHHC---------CBC
T ss_pred             ----cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHH--hcCCC------CCCcC
Confidence                112346 66766666654443     23589999999997765421110 01111111  11111      22578


Q ss_pred             HHHHHHHHHHHhhCCC
Q 020254          231 LDDIVNLIYEALSNPS  246 (328)
Q Consensus       231 v~D~a~~~~~~~~~~~  246 (328)
                      ++|+|++++.++..+.
T Consensus       228 pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         228 PEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhCChh
Confidence            9999999999998764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.69  E-value=4.7e-17  Score=134.78  Aligned_cols=220  Identities=18%  Similarity=0.122  Sum_probs=143.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC---CccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK---KTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~---~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      +.|+++||||++.||+++++.|++.|++|++.+|+..+..+...    ..   .......+|+.|+++++++++      
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999999999999998765433221    10   011134579999888776653      


Q ss_pred             -CCcEEEECCCCCCCC-----CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCC
Q 020254           89 -GSTAVVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  160 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~  160 (328)
                       ++|++||+||.....     ....+.++..+++|+.++..+.+++.+.  ..+...++++||.+.  +..         
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~--~~~---------  151 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG--PQA---------  151 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS--SSC---------
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhc--ccc---------
Confidence             689999999964321     1244678899999999988887776542  134445666665443  221         


Q ss_pred             CCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc------h-hhhHHHHHH-HcCCCCCCCCccccc
Q 020254          161 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA------L-AKMIPLFMM-FAGGPLGSGQQWFSW  228 (328)
Q Consensus       161 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~------~-~~~~~~~~~-~~~~~~~~~~~~~~~  228 (328)
                      .+....| .+|.....+...++.+   .|+++..+.||.|-.+....      . ......... ....|++.      +
T Consensus       152 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR------~  225 (274)
T d1xhla_         152 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH------C  225 (274)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS------C
T ss_pred             CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCC------C
Confidence            1223457 6777666665544433   48999999999997652110      0 011111111 11223322      5


Q ss_pred             ccHHHHHHHHHHHhhC--CC-CCc-eEEecCCCc
Q 020254          229 IHLDDIVNLIYEALSN--PS-YRG-VINGTAPNP  258 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~--~~-~~g-~~~i~~~~~  258 (328)
                      ..++|+|.+++.++..  .. ..| ++.+.+|..
T Consensus       226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            6899999999998853  22 344 888888753

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.69  E-value=1.9e-16  Score=130.11  Aligned_cols=221  Identities=20%  Similarity=0.046  Sum_probs=143.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCChhhHhhcC-------
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------   88 (328)
                      -..|++|||||+|.||.++++.|+++|++|++..|+.... ...    ...........+|+.|.+++++.++       
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999999877765442 211    1111112245689999888876653       


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  165 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~  165 (328)
                      ++|++||+||.....   ....+.++..+++|+.+...+++++.+......+++.++|.... +..         .+...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~-~~~---------~~~~~  153 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV-MTG---------IPNHA  153 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT-CCS---------CCSCH
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccc-ccC---------CCCch
Confidence            789999999975442   35568889999999999988888776631122456666654432 221         12234


Q ss_pred             ch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC----------cchhhhHHHH--HHHcCCCCCCCCcccccc
Q 020254          166 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG----------GALAKMIPLF--MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       166 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~i  229 (328)
                      .| .+|...+.....++.+   .|+++.+|.||.+-.+-.          .........+  ......|+.      -+.
T Consensus       154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g  227 (259)
T d1ja9a_         154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK------RIG  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS------SCB
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC------CCc
Confidence            56 6676665555444443   489999999999864310          0000000111  112223322      267


Q ss_pred             cHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          230 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ..+|++++++.++....  ..| ++.+.+|.
T Consensus       228 ~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         228 YPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            89999999999987644  344 88877764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.68  E-value=5.9e-17  Score=134.09  Aligned_cols=222  Identities=18%  Similarity=0.138  Sum_probs=144.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC---CccccCceeecCChhhHhhcC------
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK---KTRFFPGVMIAEEPQWRDCIQ------   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~---~~~~~~~~d~~~~~~~~~~~~------   88 (328)
                      +.|+++||||++.||+++++.|+++|++|++.+|+..+..+..    ...   .......+|+.|+++++++++      
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4589999999999999999999999999999999876543321    111   111234679999888776663      


Q ss_pred             -CCcEEEECCCCCCCC-------CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccC
Q 020254           89 -GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDE  159 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e  159 (328)
                       ++|++||+||.....       +...+.+...+++|+.++..+.+++... ..+...+|+++|+..+..+         
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~---------  154 (272)
T d1xkqa_          84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA---------  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC---------
T ss_pred             CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC---------
Confidence             789999999975432       2233468889999999988888776552 1133456666665332122         


Q ss_pred             CCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcc-------hhhhHHHHH-HHcCCCCCCCCcccc
Q 020254          160 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-------LAKMIPLFM-MFAGGPLGSGQQWFS  227 (328)
Q Consensus       160 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~  227 (328)
                       .+....| .+|.....+...++.+   +|+++.+|.||.|-.+....       ......... .....|++      -
T Consensus       155 -~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R  227 (272)
T d1xkqa_         155 -QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG------A  227 (272)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS------S
T ss_pred             -CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC------C
Confidence             1223457 6777666665555433   58999999999987652110       001111111 11122322      2


Q ss_pred             cccHHHHHHHHHHHhhCC--C-CCc-eEEecCCCcc
Q 020254          228 WIHLDDIVNLIYEALSNP--S-YRG-VINGTAPNPV  259 (328)
Q Consensus       228 ~i~v~D~a~~~~~~~~~~--~-~~g-~~~i~~~~~~  259 (328)
                      +..++|+|++++.++...  . ..| ++.+.+|..+
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            678999999999988532  2 344 8888887644

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=2.4e-16  Score=131.91  Aligned_cols=209  Identities=15%  Similarity=0.082  Sum_probs=138.3

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC----------CccccCceeecCChhhHhhc--
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK----------KTRFFPGVMIAEEPQWRDCI--   87 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~--   87 (328)
                      ..+.|+++||||++.||+++++.|+++|++|++.+|+...........          .......+|+.|.+++++.+  
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence            345689999999999999999999999999999988754321111000          00012246777777665544  


Q ss_pred             -----CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccc
Q 020254           88 -----QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF  157 (328)
Q Consensus        88 -----~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~  157 (328)
                           .++|++||+||....   .+...+.++..+++|+.++..+.+++...  +++..++|++||... .++.      
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~-~~~~------  156 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG-IYGN------  156 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH-HHCC------
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh-cCCC------
Confidence                 379999999997644   34556888999999999988888776542  145578999999774 1332      


Q ss_pred             cCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHH
Q 020254          158 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  233 (328)
Q Consensus       158 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  233 (328)
                          +....| .+|.........++.+   +|+++.++.||.+-....    ...+             +.....+.++|
T Consensus       157 ----~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~----~~~~-------------~~~~~~~~Ped  215 (302)
T d1gz6a_         157 ----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE----TVMP-------------EDLVEALKPEY  215 (302)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG----GGSC-------------HHHHHHSCGGG
T ss_pred             ----CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh----hcCc-------------HhhHhcCCHHH
Confidence                223457 7777776666555544   489999999997632211    1111             01122345789


Q ss_pred             HHHHHHHHhhCCC--CCceEEecCC
Q 020254          234 IVNLIYEALSNPS--YRGVINGTAP  256 (328)
Q Consensus       234 ~a~~~~~~~~~~~--~~g~~~i~~~  256 (328)
                      +|.+++.++....  .+.++.+.+|
T Consensus       216 vA~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         216 VAPLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             THHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHcCCCcCCCCcEEEeCCC
Confidence            9999999875432  2336666544

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=6.9e-17  Score=131.03  Aligned_cols=198  Identities=12%  Similarity=-0.020  Sum_probs=136.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCChhhHhhcC-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G   89 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~   89 (328)
                      -..+.++||||++.||++++++|+++|++|++++|+..+......    .........+|++|+++++++++       +
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            345799999999999999999999999999999998765443321    11112244689999988876653       6


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      +|++||+||.....   +...+.++..+++|+.++..+.+++...  +++..++|++||...  +...         |..
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~--~~~~---------~~~  153 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG--HVSV---------PFL  153 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC---CCCH---------HHH
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh--cCCC---------CCc
Confidence            99999999976442   2334667889999999988887766542  255678999999875  2211         112


Q ss_pred             Cch-HHHHHHHHHHHHhccc------CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          165 NDY-LAEVCREWEGTALKVN------KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~------~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ..| .+|.........++.+      .|+.++++.||.|-.+-..   ....              .....+..+|+|+.
T Consensus       154 ~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~---~~~~--------------~~~~~~~pe~va~~  216 (244)
T d1yb1a_         154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK---NPST--------------SLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT---CTHH--------------HHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh---CcCc--------------cccCCCCHHHHHHH
Confidence            456 6676666655554432      4799999999988655211   1000              01124578999999


Q ss_pred             HHHHhhCCC
Q 020254          238 IYEALSNPS  246 (328)
Q Consensus       238 ~~~~~~~~~  246 (328)
                      ++..+....
T Consensus       217 i~~~~~~~~  225 (244)
T d1yb1a_         217 LMHGILTEQ  225 (244)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            998887653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.67  E-value=7.6e-16  Score=125.81  Aligned_cols=211  Identities=10%  Similarity=-0.019  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCC-----CCCccccCceeec-CChhhHhhc-------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIA-EEPQWRDCI-------Q   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~-~~~~~~~~~-------~   88 (328)
                      +.|+||||||++.||.+++++|+++|.+|++++|+.........     ......+..+|+. +.+++++++       .
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999888765332211     1111113346776 333444433       3


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC----C-CCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES----P-EGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ++|++||+||..     ..+.++..+++|+.++..+..++.+.    + ....++|++||...  +.+.         +.
T Consensus        84 ~iDilvnnAG~~-----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~--~~~~---------~~  147 (254)
T d1sbya1          84 TVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAI---------HQ  147 (254)
T ss_dssp             CCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSCC---------TT
T ss_pred             CCCEEEeCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh--ccCC---------CC
Confidence            799999999964     45668899999999988888776552    1 13456899988765  3221         22


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC---cchhhhHHHH-HHHcCCCCCCCCcccccccHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG---GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  235 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  235 (328)
                      ...| .+|.........++.+   .++++..|.||.|..+-.   ......-..+ ....         .+.....+++|
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~e~va  218 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SHPTQTSEQCG  218 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TSCCEEHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc---------cCCCCCHHHHH
Confidence            3456 6676665555444443   389999999999986511   0000000000 1111         12345789999


Q ss_pred             HHHHHHhhCCCCCceEEecCCC
Q 020254          236 NLIYEALSNPSYRGVINGTAPN  257 (328)
Q Consensus       236 ~~~~~~~~~~~~~g~~~i~~~~  257 (328)
                      ++++.+++....+.++.+.+|.
T Consensus       219 ~~~~~~~~~~~tG~vi~vdgG~  240 (254)
T d1sbya1         219 QNFVKAIEANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTE
T ss_pred             HHHHHhhhCCCCCCEEEECCCE
Confidence            9999988776544488887774

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.66  E-value=5.1e-16  Score=125.72  Aligned_cols=199  Identities=16%  Similarity=0.081  Sum_probs=132.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH-------hhcC--CCcEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR-------DCIQ--GSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-------~~~~--~~d~v   93 (328)
                      .|+||||||+|.||+++++.|+++|++|.+++++.........      ...++..+.+..+       +.+.  ++|++
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV------IVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEE------ECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccc------eeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            5799999999999999999999999999999887654321111      1223333222222       2222  58999


Q ss_pred             EECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-H
Q 020254           94 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  168 (328)
Q Consensus        94 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~  168 (328)
                      ||+||....    .....+.++..+++|+.++..+..++.+......++|++||...  ...         .+....| .
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~--~~~---------~~~~~~Y~a  144 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA--LDG---------TPGMIGYGM  144 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH--cCC---------ccCCcccHH
Confidence            999985322    12223567778999999998888877653223468999999765  221         2223467 7


Q ss_pred             HHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhh
Q 020254          169 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  243 (328)
Q Consensus       169 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  243 (328)
                      +|.........++.+     .|+++..+.||.+..+-       ..   ...  +   ....-.++..+++++.+..++.
T Consensus       145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~-------~~---~~~--~---~~~~~~~~~pe~va~~~~~l~s  209 (236)
T d1dhra_         145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------NR---KSM--P---EADFSSWTPLEFLVETFHDWIT  209 (236)
T ss_dssp             HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------HH---HHS--T---TSCGGGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc-------ch---hhC--c---cchhhcCCCHHHHHHHHHHHhC
Confidence            788887777776654     47999999999987652       11   010  1   1112347889999999999987


Q ss_pred             CCC---CCceEEe
Q 020254          244 NPS---YRGVING  253 (328)
Q Consensus       244 ~~~---~~g~~~i  253 (328)
                      ...   .++++.+
T Consensus       210 ~~~~~i~G~~i~v  222 (236)
T d1dhra_         210 GNKRPNSGSLIQV  222 (236)
T ss_dssp             TTTCCCTTCEEEE
T ss_pred             CCccCCCCCeEEE
Confidence            643   3345554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.66  E-value=8.2e-17  Score=133.45  Aligned_cols=219  Identities=16%  Similarity=0.096  Sum_probs=139.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCChhhHhhc-------CCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI-------QGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~~d~v   93 (328)
                      +.|+++||||++.||+++++.|+++|++|++++|+.++..+..... .......+|+.+.+++++++       .++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            4579999999999999999999999999999999876544332211 11123457898888777665       378999


Q ss_pred             EECCCCCCCC--------CCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCCC
Q 020254           94 VNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  164 (328)
Q Consensus        94 i~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~  164 (328)
                      ||+||.....        ....+.++..+++|+.++..+.+++.+. +.+..++|+++|... ..+          .+..
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~-~~~----------~~~~  152 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAG-FYP----------NGGG  152 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG-TST----------TSSC
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechh-ccC----------CCCC
Confidence            9999964221        1112347889999999988887776542 112357888888654 122          1223


Q ss_pred             Cch-HHHHHHHHHHHHhccc--CCCeEEEEEeceEEcCCCcch-----hhhHH---HH-HHHcCCCCCCCCcccccccHH
Q 020254          165 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGAL-----AKMIP---LF-MMFAGGPLGSGQQWFSWIHLD  232 (328)
Q Consensus       165 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~-----~~~~~---~~-~~~~~~~~~~~~~~~~~i~v~  232 (328)
                      ..| .+|.........++.+  .++++..|.||.|-.+-....     .+...   .. ......|++.      +..++
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR------~g~pe  226 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR------MPEVE  226 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSS------CCCGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCC------CcCHH
Confidence            457 6776665555444332  259999999999876532111     00000   01 1112223322      56789


Q ss_pred             HHHHHHHHHhhCC--C-CCc-eEEecCCC
Q 020254          233 DIVNLIYEALSNP--S-YRG-VINGTAPN  257 (328)
Q Consensus       233 D~a~~~~~~~~~~--~-~~g-~~~i~~~~  257 (328)
                      |+|.+++.++..+  . ..| ++++.+|-
T Consensus       227 eva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         227 EYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             GGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             HHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            9999999887522  2 344 88887764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.65  E-value=2.6e-15  Score=122.64  Aligned_cols=213  Identities=17%  Similarity=0.134  Sum_probs=133.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhhcC---------C
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ---------G   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~---------~   89 (328)
                      ++++||||||++.||.+++++|+++|+  +|++.+|+..+..++..... ......+|+.|.++++++++         +
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            347999999999999999999999995  78888998877655443221 12245679998887765542         4


Q ss_pred             CcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-------------CCCCCcEEEEecccceeecCC
Q 020254           90 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLVSATALGYYGTS  152 (328)
Q Consensus        90 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~~~~v~~Ss~~v~~yg~~  152 (328)
                      +|++||+||....    .....+.++..+++|+.++..+.+++...             ......++.+|+...  +-..
T Consensus        82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~--~~~~  159 (250)
T d1yo6a1          82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG--SITD  159 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG--CSTT
T ss_pred             eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc--cccC
Confidence            8999999997433    23445678889999999998887776431             011234666665543  1111


Q ss_pred             CcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCccccc
Q 020254          153 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  228 (328)
Q Consensus       153 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (328)
                      ..  ......+...| .+|.........++.+   .|+.+.++.||.|-.+-..                      ....
T Consensus       160 ~~--~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~----------------------~~~~  215 (250)
T d1yo6a1         160 NT--SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----------------------KNAA  215 (250)
T ss_dssp             CC--STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred             Cc--ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC----------------------CCCC
Confidence            10  00111122347 7776666665554443   4899999999987654210                      0113


Q ss_pred             ccHHHHHHHHHHHhhCCC--CCceEEecCCCccC
Q 020254          229 IHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  260 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~--~~g~~~i~~~~~~~  260 (328)
                      +.+++.+..++..+....  ..|.|...++.|+.
T Consensus       216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         216 LTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence            567888999988887644  45655555666554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.65  E-value=4.6e-15  Score=121.96  Aligned_cols=201  Identities=15%  Similarity=0.126  Sum_probs=137.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCccccc-------CCCCCccccCceeecCChhhHhhcC------C
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ------G   89 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~------~   89 (328)
                      .+||||||+|.||.+++++|+++|+ +|++++|+..+....       ...........+|+.|.++++++++      +
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            4899999999999999999999998 688888874332211       1111112244679999888877663      4


Q ss_pred             CcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCc
Q 020254           90 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  166 (328)
Q Consensus        90 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~  166 (328)
                      .|.|+|+++.....   +.........++.|+.++.++.+++..  ....++|++||... .+|.          +....
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~-~~g~----------~~~~~  156 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFAS-AFGA----------PGLGG  156 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHH-HTCC----------TTCTT
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhh-ccCC----------cccHH
Confidence            79999999976542   344566788889999999999998887  66778999999775 2332          22345


Q ss_pred             h-HHHHHHHHHHHHhcccCCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCC
Q 020254          167 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  245 (328)
Q Consensus       167 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  245 (328)
                      | .+|...+.....+.. .|++++.|.||.+.+++-... ...   .     .+  .......+..+++++++..++..+
T Consensus       157 YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~-~~~---~-----~~--~~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         157 YAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG-PVA---D-----RF--RRHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             THHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---------------------C--TTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccc-hHH---H-----HH--HhcCCCCCCHHHHHHHHHHHHhCC
Confidence            7 777776666555544 599999999998877642100 000   0     00  011134678999999999999886


Q ss_pred             CCCc
Q 020254          246 SYRG  249 (328)
Q Consensus       246 ~~~g  249 (328)
                      ....
T Consensus       225 ~~~~  228 (259)
T d2fr1a1         225 EVCP  228 (259)
T ss_dssp             CSSC
T ss_pred             CceE
Confidence            5433

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.64  E-value=7.7e-16  Score=129.07  Aligned_cols=220  Identities=15%  Similarity=0.053  Sum_probs=139.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhhc-------C
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCI-------Q   88 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~-------~   88 (328)
                      -+.|++|||||+|.||++++++|+++|++|++++|+..+..+....     ........+|+.+.+.+++++       .
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            3458999999999999999999999999999999997654332211     111123457888888776554       3


Q ss_pred             CCcEEEECCCCCCCC---CCChhHHHHHHHhhhhhHHHHHHHHhcC---CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           89 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      ++|++||+||.....   ..........+.+|..+...+...+...   ......++.+||...  ...         .+
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~--~~~---------~~  171 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA--ETG---------SG  171 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH--HHC---------CT
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchh--hhc---------cc
Confidence            789999999975442   2334566777788888866665543321   133444555555443  111         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch-hhhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      ....| .+|.........++.+   .|+++.+|.||.|-.+..... ...-... ......|++.      +..++|+|+
T Consensus       172 ~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R------~~~pediA~  245 (294)
T d1w6ua_         172 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGR------LGTVEELAN  245 (294)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSS------CBCHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCC------CCCHHHHHH
Confidence            23457 7777666666555443   489999999999977642111 0011111 2223334332      567899999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCC
Q 020254          237 LIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++..++....  ..| ++.+.+|.
T Consensus       246 ~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         246 LAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHhCchhcCCCCcEEEECCCh
Confidence            9999986533  345 88888875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.63  E-value=3.7e-15  Score=121.57  Aligned_cols=169  Identities=14%  Similarity=0.090  Sum_probs=116.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcC--------
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ--------   88 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~--------   88 (328)
                      ||+||||||++.||.+++++|++   +|++|++.+|+.++...+..   .........+|+.|+++++++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            57899999999999999999974   68999999999876544321   11112245689999887765532        


Q ss_pred             -CCcEEEECCCCCCC----CCCChhHHHHHHHhhhhhHHHHHHHHhcC-------------CCCCCcEEEEecccceeec
Q 020254           89 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLVSATALGYYG  150 (328)
Q Consensus        89 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~~~~v~~Ss~~v~~yg  150 (328)
                       ++|++||+||....    .+...+..+..+++|+.++..+..++...             ..+..++|.+||.... .+
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~-~~  160 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS-IQ  160 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC-ST
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-cC
Confidence             58999999997433    23455667889999999988887776431             1235678899886531 11


Q ss_pred             CCCcccccCCCCCCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcC
Q 020254          151 TSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGK  199 (328)
Q Consensus       151 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~  199 (328)
                      ..       ..+....| .+|.........++.   ..|+.+..+.||.|-.+
T Consensus       161 ~~-------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         161 GN-------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             TC-------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             CC-------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            11       11222357 677666655544433   24899999999998765

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.61  E-value=3.3e-15  Score=120.84  Aligned_cols=198  Identities=15%  Similarity=0.076  Sum_probs=126.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-------hhhHhhc--CCCcEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-------PQWRDCI--QGSTAVV   94 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~~--~~~d~vi   94 (328)
                      .|||||||+|.||.+++++|+++|++|++++|++........      ....+..+.       +.+...+  .++|++|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNI------LVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEE------ECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccc------eeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            479999999999999999999999999999998754322111      111222211       1222323  3589999


Q ss_pred             ECCCCCCC-CC---CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HH
Q 020254           95 NLAGTPIG-TR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  169 (328)
Q Consensus        95 ~~a~~~~~-~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~  169 (328)
                      |+||.... ..   ...+.++..+++|+.++..+..++........++|++||...  +...         +....| .+
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~--~~~~---------~~~~~Y~as  145 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA--MGPT---------PSMIGYGMA  145 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSCC---------TTBHHHHHH
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh--cCCc---------ccccchHHH
Confidence            99996322 11   123456677899999988888777663223367999998764  2221         223457 77


Q ss_pred             HHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          170 EVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       170 k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                      |.........++.+     .++.+..+.||.+-.+.       ..   ....     ......++..+|+++.++..+..
T Consensus       146 Kaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-------~~---~~~~-----~~~~~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         146 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------NR---KWMP-----NADHSSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------HH---HHST-----TCCGGGCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-------hh---hhCc-----CCccccCCCHHHHHHHHHHHhcC
Confidence            87777777666543     36788889999875431       11   1111     11234578899999998876655


Q ss_pred             CC---CCc-eEEe
Q 020254          245 PS---YRG-VING  253 (328)
Q Consensus       245 ~~---~~g-~~~i  253 (328)
                      +.   ..| .+.+
T Consensus       211 ~~~~~~tG~~i~v  223 (235)
T d1ooea_         211 TSSRPSSGALLKI  223 (235)
T ss_dssp             GGGCCCTTCEEEE
T ss_pred             ccccCCCceEEEE
Confidence            32   344 5555

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.1e-15  Score=124.34  Aligned_cols=214  Identities=14%  Similarity=0.071  Sum_probs=134.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEE---ecCCCccccc-------CCCCCccccCceeecCChhhHhhcC-----
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVL---TRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ-----   88 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~-----   88 (328)
                      +-||||||++.||+++++.|++.|.+|+.+   .|+......+       ...........+|+.|.+++.++++     
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            457899999999999999999999765544   4443322211       1112122244689999988877663     


Q ss_pred             CCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           89 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        89 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      .+|+++|+++....   .....+.+...+++|+.++.++.+++...  +.+..++|++||...  .-.         .|.
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g--~~~---------~~~  151 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG--LMG---------LPF  151 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG--TSC---------CTT
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh--cCC---------CCC
Confidence            58999999997544   33556888999999999988877766442  145678999999764  221         223


Q ss_pred             CCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch----------------hhhHHHHHHHcCCCCCCCC
Q 020254          164 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----------------AKMIPLFMMFAGGPLGSGQ  223 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~  223 (328)
                      ...| .+|.........++.+   +|+++.+|.||.|-.+-....                .++.........      .
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  225 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQ------V  225 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHH------H
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhh------h
Confidence            3457 7777776665555443   489999999999876521100                000000000000      0


Q ss_pred             cccccccHHHHHHHHHHHhhCCCCCceEEecC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  255 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~~i~~  255 (328)
                      .......++|+|++++.++..+.+. ...+.+
T Consensus       226 ~~~~~~~PeeVA~~v~~~~~~~~p~-~ry~~g  256 (285)
T d1jtva_         226 FREAAQNPEEVAEVFLTALRAPKPT-LRYFTT  256 (285)
T ss_dssp             HHHHCBCHHHHHHHHHHHHHCSSCC-SEEESC
T ss_pred             hcccCCCHHHHHHHHHHHHhCCCCC-eEEecH
Confidence            0112467899999999999886533 334444

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=7.6e-15  Score=120.58  Aligned_cols=220  Identities=14%  Similarity=0.070  Sum_probs=139.6

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhc-------CC
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      +.|+||||||+|  .||+++++.|+++|++|++.+|++.......+   ..........|..+..++.+.+       ..
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            468999999999  79999999999999999999998654322211   0000112234555544444333       36


Q ss_pred             CcEEEECCCCCCCCC--------CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCC
Q 020254           90 STAVVNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  161 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~  161 (328)
                      .|+++|+++......        ...+........|+.+...+..++.......+.++++||.+.. ++          .
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-~~----------~  152 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-RA----------I  152 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-SB----------C
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-cC----------C
Confidence            799999998743321        2234456677888888888888877642334457888876541 22          2


Q ss_pred             CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHH
Q 020254          162 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  236 (328)
Q Consensus       162 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  236 (328)
                      |....| .+|...+.....++.+   +|+++.+++||.|..+............ ......|++.      +..++|+|.
T Consensus       153 ~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R------~~~peeia~  226 (258)
T d1qsga_         153 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR------TVTIEDVGN  226 (258)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS------CCCHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCC------CcCHHHHHH
Confidence            233457 7777776666555443   4899999999999877532211111111 2222233322      577999999


Q ss_pred             HHHHHhhCCC--CCc-eEEecCCCc
Q 020254          237 LIYEALSNPS--YRG-VINGTAPNP  258 (328)
Q Consensus       237 ~~~~~~~~~~--~~g-~~~i~~~~~  258 (328)
                      ++..++....  ..| ++.+.+|..
T Consensus       227 ~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         227 SAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhcCccCceEEECcCHH
Confidence            9999986533  445 888887754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=8.4e-15  Score=120.24  Aligned_cols=206  Identities=12%  Similarity=0.021  Sum_probs=136.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCcccccCCC------CCccccCceeecCChhhHhhcC----
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~----   88 (328)
                      ..|.++||||++.||.+++++|.+   +|++|++++|+..+..+....      ........+|+.++++++++++    
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            346799999999999999999986   699999999988664433211      1111244689999888776642    


Q ss_pred             -------CCcEEEECCCCCCC------CCCChhHHHHHHHhhhhhHHHHHHHHhcC-C-CC--CCcEEEEecccceeecC
Q 020254           89 -------GSTAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG--VRPSVLVSATALGYYGT  151 (328)
Q Consensus        89 -------~~d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~--~~~~v~~Ss~~v~~yg~  151 (328)
                             ..|+++|+||....      .....+.++..+++|+.++..+.+++.+. . .+  ..++|++||...  +..
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~--~~~  162 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQP  162 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--TSC
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc--cCC
Confidence                   46899999986432      23445778899999999999999988764 1 11  347899998764  221


Q ss_pred             CCcccccCCCCCCCch-HHHHHHHHHHHHhccc-CCCeEEEEEeceEEcCCCcch------hhhHHHHHHHcCCCCCCCC
Q 020254          152 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPLGSGQ  223 (328)
Q Consensus       152 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~  223 (328)
                               .+....| .+|.........++.+ .|+++.++.||.|-.+.....      ......+...  .+.    
T Consensus       163 ---------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~----  227 (259)
T d1oaaa_         163 ---------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL--KSD----  227 (259)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH--HHT----
T ss_pred             ---------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhc--CCC----
Confidence                     2223467 6776666655544443 589999999999876521000      0111111000  011    


Q ss_pred             cccccccHHHHHHHHHHHhhCCC
Q 020254          224 QWFSWIHLDDIVNLIYEALSNPS  246 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~~  246 (328)
                        ..+..++|+|++++.++....
T Consensus       228 --~r~~~p~evA~~i~~ll~~~s  248 (259)
T d1oaaa_         228 --GALVDCGTSAQKLLGLLQKDT  248 (259)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCC
T ss_pred             --CCCCCHHHHHHHHHHHhhhcc
Confidence              124788999999999887543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.4e-14  Score=116.82  Aligned_cols=206  Identities=13%  Similarity=0.104  Sum_probs=132.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-ccccCceeecCChhhHhh-------cCCCcE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDC-------IQGSTA   92 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~-------~~~~d~   92 (328)
                      -+.|.++||||++.||.+++++|+++|++|++++|+............ ......+++.+.+.+++.       ....|.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            356889999999999999999999999999999999876544332111 001223455554444322       236788


Q ss_pred             EEECCCCCCC---------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--------CCCCCcEEEEecccceeecCCCcc
Q 020254           93 VVNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLVSATALGYYGTSETE  155 (328)
Q Consensus        93 vi~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~~v~~Ss~~v~~yg~~~~~  155 (328)
                      ++++++....         .....+.+...+++|+.++..+..++...        +.+..++|++||...  +..    
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~--~~~----  156 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--FEG----  156 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHC----
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh--ccC----
Confidence            8888765322         12334678889999999999988887541        123346999999775  322    


Q ss_pred             cccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH--HHHcCCCCCCCCcccccc
Q 020254          156 VFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWI  229 (328)
Q Consensus       156 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i  229 (328)
                           .|....| .+|...+.+...++.+   +|+++.++.||.+..+....   +....  ......|+.     .-+.
T Consensus       157 -----~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl~-----~R~g  223 (248)
T d2o23a1         157 -----QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVCNFLASQVPFP-----SRLG  223 (248)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSS-----CSCB
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc---CCHHHHHHHHhcCCCC-----CCCc
Confidence                 2234567 7777777766555544   48999999999987664221   11111  112222321     1156


Q ss_pred             cHHHHHHHHHHHhhCC
Q 020254          230 HLDDIVNLIYEALSNP  245 (328)
Q Consensus       230 ~v~D~a~~~~~~~~~~  245 (328)
                      .++|+|++++.+++.+
T Consensus       224 ~peevA~~v~fL~s~~  239 (248)
T d2o23a1         224 DPAEYAHLVQAIIENP  239 (248)
T ss_dssp             CHHHHHHHHHHHHHCT
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            8999999999988753

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=7.2e-15  Score=121.72  Aligned_cols=199  Identities=15%  Similarity=0.020  Sum_probs=129.5

Q ss_pred             CCeE-EEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccC----CCCCccccCceeecCChhhHhhc-------CC
Q 020254           23 QMTV-SVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        23 ~~~i-lI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      .|+| |||||++.||.+++++|+++ |++|++.+|+.++.....    .......+..+|+.|.+++++++       .+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            3566 89999999999999999985 899999999987643322    11111224568999988877655       37


Q ss_pred             CcEEEECCCCCCCCC---CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcc-----------
Q 020254           90 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE-----------  155 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~-----------  155 (328)
                      +|++||+||......   ...+.++..+++|+.++..+.+++...-....++|++||.... .+.....           
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~-~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV-RALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH-HHHHTSCHHHHHHHHCSS
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee-ccccccchhhhhhhcccc
Confidence            899999999754422   2234566789999999999999887642223579999996531 1110000           


Q ss_pred             --------------------cccCCCCCCCch-HHHHHHHHHHHHhc-------ccCCCeEEEEEeceEEcCCCcchhhh
Q 020254          156 --------------------VFDESSPSGNDY-LAEVCREWEGTALK-------VNKDVRLALIRIGIVLGKDGGALAKM  207 (328)
Q Consensus       156 --------------------~~~e~~~~~~~y-~~k~~~~~~~~~~~-------~~~~~~~~ilRp~~v~g~~~~~~~~~  207 (328)
                                          .......+...| .+|.........++       ...++.+..+.||.|-.+-...    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~----  236 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----  236 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC----
Confidence                                001112233457 66765544433222       1248999999999886552110    


Q ss_pred             HHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhC
Q 020254          208 IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  244 (328)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  244 (328)
                                        .....++|.|+.++.+...
T Consensus       237 ------------------~~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         237 ------------------KATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             ------------------TCSBCHHHHTHHHHHHHSC
T ss_pred             ------------------cccCCHHHHHHHHHHHHcC
Confidence                              1124578999988887643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3.9e-14  Score=116.78  Aligned_cols=201  Identities=14%  Similarity=0.051  Sum_probs=131.6

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCChhhHhh-------c
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDC-------I   87 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~-------~   87 (328)
                      +.+.|++|||||++.||.+++++|+++|++|++++|+.++..+....     ........+|..+.+.+...       .
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            45668999999999999999999999999999999987654433211     11011222344444443332       3


Q ss_pred             CCCcEEEECCCCCCC---CCCChhHHHHHHHhhhhhHHHHHHHHhcC-CCCCCcEEEEecccceeecCCCcccccCCCCC
Q 020254           88 QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPS  163 (328)
Q Consensus        88 ~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~  163 (328)
                      ...|+++++|+....   .....+.....+++|+.++..+..++... +.+..++|++||.+.  +-.         .|.
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~--~~~---------~p~  159 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG--KVA---------YPM  159 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG--TSC---------CTT
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh--cCC---------CCC
Confidence            478999999987543   23455777888999999988877776542 123468999998775  221         223


Q ss_pred             CCch-HHHHHHHHHHHHhccc-----CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCCCcccccccHHHHHHH
Q 020254          164 GNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       164 ~~~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ...| .+|...+.....++.+     .++.+..+.||.|-.+-       ..  ...      .+.........+++|+.
T Consensus       160 ~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-------~~--~~~------~~~~~~~~~~~e~~a~~  224 (269)
T d1xu9a_         160 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------AM--KAV------SGIVHMQAAPKEECALE  224 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-------HH--HHS------CGGGGGGCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-------HH--Hhc------cCCccccCCCHHHHHHH
Confidence            3467 7777766665555432     46889999999885431       11  000      11122335678999999


Q ss_pred             HHHHhhCCC
Q 020254          238 IYEALSNPS  246 (328)
Q Consensus       238 ~~~~~~~~~  246 (328)
                      ++..+....
T Consensus       225 i~~~~~~~~  233 (269)
T d1xu9a_         225 IIKGGALRQ  233 (269)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHhhcCC
Confidence            998777644

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.51  E-value=1.9e-13  Score=110.85  Aligned_cols=209  Identities=18%  Similarity=0.111  Sum_probs=132.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc------CCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~d~vi~~a   97 (328)
                      |++|||||++.||++++++|+++|++|++++|+.+.....        ....|+.+......+.      ...+.+++.+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI--------YVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   73 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSE--------EEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccce--------EeeccccchhhhHHHHHhhhccccccchhhhh
Confidence            6899999999999999999999999999999987643322        2234555444333322      2445555555


Q ss_pred             CCCCC-------CCCChhHHHHHHHhhhhhHHHHHHHHhcC--------CCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           98 GTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        98 ~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +....       .....+.+...++.|+.+...+...+...        +.+..++|++||...  +..         .+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~--~~~---------~~  142 (241)
T d1uaya_          74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA--FEG---------QI  142 (241)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH--HHC---------CT
T ss_pred             hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhh--ccC---------CC
Confidence            53221       22344667788899999888777665431        123457999999765  221         12


Q ss_pred             CCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|.....+...++.+   +|+++.+|.||.+..+....  ...... ......++.     .-+..++|+|.+
T Consensus       143 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~--~~~~~~~~~~~~~~~~-----~R~g~pedvA~~  215 (241)
T d1uaya_         143 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG--LPEKAKASLAAQVPFP-----PRLGRPEEYAAL  215 (241)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT--SCHHHHHHHHTTCCSS-----CSCCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch--hhhhHHHHHHhcCCCC-----CCCcCHHHHHHH
Confidence            23467 7777776666555543   48999999999987652111  011111 222222321     125679999999


Q ss_pred             HHHHhhCCCCCc-eEEecCCCc
Q 020254          238 IYEALSNPSYRG-VINGTAPNP  258 (328)
Q Consensus       238 ~~~~~~~~~~~g-~~~i~~~~~  258 (328)
                      ++.++...-..| ++.+.+|-.
T Consensus       216 v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         216 VLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHhCCCCCCCEEEECCccc
Confidence            999988544445 888877753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.49  E-value=2e-13  Score=112.89  Aligned_cols=219  Identities=12%  Similarity=0.045  Sum_probs=124.3

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhc-------CC
Q 020254           22 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCI-------QG   89 (328)
Q Consensus        22 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~-------~~   89 (328)
                      +.|++|||||+|  .||.++++.|+++|++|++++|++.......   ..........+|+.+.+++.+++       .+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            468999999987  7999999999999999999999864322221   11111113346777666655544       47


Q ss_pred             CcEEEECCCCCCCC----CCCh---hHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCcccccCCCC
Q 020254           90 STAVVNLAGTPIGT----RWSS---EIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  162 (328)
Q Consensus        90 ~d~vi~~a~~~~~~----~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~  162 (328)
                      +|++||+++.....    ....   .........+..+.........+.......++.+|+.+.  .+.         .+
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~--~~~---------~~  152 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS--TKY---------MA  152 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------CT
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccc--ccc---------cc
Confidence            89999999975331    1111   222222333333444444444432112223444444433  221         11


Q ss_pred             CCCch-HHHHHHHHHHHHhcc---cCCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHH
Q 020254          163 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  237 (328)
Q Consensus       163 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~  237 (328)
                      ....| .+|..........+.   ..|+++.++.||.+..+........-... ......|+      .-+..++|+|.+
T Consensus       153 ~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedIA~~  226 (274)
T d2pd4a1         153 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEEVGNA  226 (274)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc------cCCcCHHHHHHH
Confidence            22345 556555444433333   24899999999999876432211111111 11112222      225789999999


Q ss_pred             HHHHhhCCC--CCc-eEEecCCC
Q 020254          238 IYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       238 ~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      ++.++....  ..| ++.+.+|.
T Consensus       227 v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         227 GMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhChhhCCCcCceEEECCCh
Confidence            999987543  345 88888875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.48  E-value=2.4e-12  Score=107.57  Aligned_cols=224  Identities=11%  Similarity=0.006  Sum_probs=132.8

Q ss_pred             ccccCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCc-------------ccccCCCCCcc------------
Q 020254           18 TQKASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK-------------AELIFPGKKTR------------   70 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~~~~~~~~------------   70 (328)
                      +...+.|++|||||+|  .||.++++.|+++|.+|++.+|++..             ...........            
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            4445678999999987  89999999999999999999885321             01110000000            


Q ss_pred             ---ccCcee--------ecCChhhHh-------hcCCCcEEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHH
Q 020254           71 ---FFPGVM--------IAEEPQWRD-------CIQGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDL  127 (328)
Q Consensus        71 ---~~~~~d--------~~~~~~~~~-------~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~  127 (328)
                         .....|        ..+.+.+++       .+.++|++||+||....     .+...+.+...+++|+.+...+..+
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence               000011        122222222       23478999999986321     2345677889999999999999998


Q ss_pred             HhcCCCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhc----ccCCCeEEEEEeceEEcCCCc
Q 020254          128 INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALK----VNKDVRLALIRIGIVLGKDGG  202 (328)
Q Consensus       128 ~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~----~~~~~~~~ilRp~~v~g~~~~  202 (328)
                      +..........+.+++.+.  ....        .+....| .+|...........    .++|+++..|.||.+..+...
T Consensus       163 ~~~~~~~~g~~~~~~~~~~--~~~~--------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~  232 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIAS--ERII--------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGG--TSCC--------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred             HHHHhhcCCcceeeeehhh--cccc--------cccccceecccccccccccccchhccccceEEecccccccccchhhh
Confidence            8763222234556665543  1111        1222345 55544443332222    224899999999999887543


Q ss_pred             chhhhHHHH-HHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCC
Q 020254          203 ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  257 (328)
Q Consensus       203 ~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~  257 (328)
                      .....-... ......|++.      +...+|+|.+++.++....  ..| ++.+.+|.
T Consensus       233 ~~~~~~~~~~~~~~~~PlgR------~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         233 AIGFIDTMIEYSYNNAPIQK------TLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CCSHHHHHHHHHHHHSSSCC------CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hccCCHHHHHHHHhCCCCCC------CCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            211111111 1122334432      5789999999999986433  344 88887774

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.46  E-value=2e-12  Score=107.44  Aligned_cols=218  Identities=11%  Similarity=0.026  Sum_probs=130.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-C-------CC---------------CCccccCceeecCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-F-------PG---------------KKTRFFPGVMIAEE   80 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~-------~~---------------~~~~~~~~~d~~~~   80 (328)
                      .-++||||++.||+++++.|+++|++|++.+|+.....+. .       ..               ........+|+.+.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            4579999999999999999999999999988765432110 0       00               00001123567777


Q ss_pred             hhhHhhc-------CCCcEEEECCCCCCCCCCCh-----------------hHHHHHHHhhhhhHHHHHHHHhcC-----
Q 020254           81 PQWRDCI-------QGSTAVVNLAGTPIGTRWSS-----------------EIKKEIKESRIRVTSKVVDLINES-----  131 (328)
Q Consensus        81 ~~~~~~~-------~~~d~vi~~a~~~~~~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~~~-----  131 (328)
                      +++++++       .++|++||+||.........                 .....++.+|+.++..+.+++.+.     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            7776654       47999999999754322111                 122346788999888887765431     


Q ss_pred             ---CCCCCcEEEEecccceeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcch
Q 020254          132 ---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL  204 (328)
Q Consensus       132 ---~~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~  204 (328)
                         ..+...++.++|...  ...         .+....| .+|.........++.+   .|+++.++.||.+-.... ..
T Consensus       163 ~~~~~~~~~ii~~~s~~~--~~~---------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-~~  230 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-MP  230 (284)
T ss_dssp             GGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-SC
T ss_pred             HHhcCCCCcccccccccc--cCC---------ccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-CC
Confidence               122334555555443  111         1223457 7777766666555443   489999999996322211 00


Q ss_pred             hhhHHHHHHHcCCCCCCCCcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCCccC
Q 020254          205 AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  260 (328)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~~~  260 (328)
                      .....  ......|+.     .-+...+|+|.+++.++....  ..| ++.+.+|..++
T Consensus       231 ~~~~~--~~~~~~pl~-----~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         231 PAVWE--GHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHH--HHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHH--HHHhcCCCC-----CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            11111  222222321     125689999999999986543  344 88888886554

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.37  E-value=8.5e-12  Score=102.61  Aligned_cols=222  Identities=13%  Similarity=0.025  Sum_probs=131.4

Q ss_pred             cCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCcccc-cCCC-CCccccCceeecCChhhHhhc---------
Q 020254           21 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPG-KKTRFFPGVMIAEEPQWRDCI---------   87 (328)
Q Consensus        21 ~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~-~~~~~~~~~d~~~~~~~~~~~---------   87 (328)
                      .+.|++|||||+|  .||.+++++|+++|++|++.+|+..+..+ .... ........+|+.+.++++.++         
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            3568999999765  59999999999999999999998765422 2111 111123457888776544332         


Q ss_pred             -CCCcEEEECCCCCCC--------CCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecccceeecCCCccccc
Q 020254           88 -QGSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD  158 (328)
Q Consensus        88 -~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~v~~yg~~~~~~~~  158 (328)
                       ...|+++|+++....        .+.........+..|.............. .+....+.++|...  ...       
T Consensus        84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~~--~~~-------  153 (268)
T d2h7ma1          84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI-MNPGGSIVGMDFDP--SRA-------  153 (268)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECCC--SSC-------
T ss_pred             CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh-cccccccccccccc--ccc-------
Confidence             257999999996421        12223455566677777777676666653 12223444444332  111       


Q ss_pred             CCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCC--------c-chhhhHHHH--HHHcCCCCCCCC
Q 020254          159 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG--------G-ALAKMIPLF--MMFAGGPLGSGQ  223 (328)
Q Consensus       159 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~--------~-~~~~~~~~~--~~~~~~~~~~~~  223 (328)
                        .|....| .+|...+.....++.+   .|+++..|.||.+-.+..        . ........+  ......|++   
T Consensus       154 --~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---  228 (268)
T d2h7ma1         154 --MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG---  228 (268)
T ss_dssp             --CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC---
T ss_pred             --CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC---
Confidence              1223356 6666666655544443   489999999998875421        0 001111111  111222222   


Q ss_pred             cccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCCcc
Q 020254          224 QWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV  259 (328)
Q Consensus       224 ~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~~  259 (328)
                        +.+..++|+|+++..++....  ..| ++.+.+|...
T Consensus       229 --rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         229 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence              225678999999999986533  344 7888877543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.35  E-value=5.5e-12  Score=103.09  Aligned_cols=210  Identities=14%  Similarity=0.079  Sum_probs=115.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhh--------HhhcCCCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW--------RDCIQGSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~~~~~d~vi   94 (328)
                      ||.|+||||++.||.+++++|++.|++|++++|+..+..             .|+.+.+..        .+.....|+++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~-------------~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------------ADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------CCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHH-------------HHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            567899999999999999999999999999999764322             133322211        12223689999


Q ss_pred             ECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC--CCCCCcEEEEecccceeecCCCccc----------------
Q 020254           95 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV----------------  156 (328)
Q Consensus        95 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~Ss~~v~~yg~~~~~~----------------  156 (328)
                      ++|+....    ..........|..+...+.+.....  .........+++.... +-.....+                
T Consensus        68 ~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~i~s~  142 (257)
T d1fjha_          68 LCAGLGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA-HLAFDKNPLALALEAGEEAKARAI  142 (257)
T ss_dssp             ECCCCCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG-SSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred             EcCCCCCc----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeecccc-chhhhhhhhhhhccCCcEEEEeee
Confidence            99986322    2234556677777766665543321  1334445555543321 11000000                


Q ss_pred             ccCC-C-CCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHH-HHHcC-CCCCCCCccccc
Q 020254          157 FDES-S-PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GPLGSGQQWFSW  228 (328)
Q Consensus       157 ~~e~-~-~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~  228 (328)
                      .... . +....| .+|...+.....++.+   +|+++..|.||.+-.+.......--... ..... .|++      -+
T Consensus       143 ~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg------R~  216 (257)
T d1fjha_         143 VEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG------RR  216 (257)
T ss_dssp             HHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT------SC
T ss_pred             hhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC------CC
Confidence            0000 0 111246 6677666666555543   4899999999999776321100000000 00111 1222      25


Q ss_pred             ccHHHHHHHHHHHhhCCC--CCc-eEEecCC
Q 020254          229 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  256 (328)
Q Consensus       229 i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~  256 (328)
                      ..++|+|.++..++....  ..| ++.+.+|
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            678999999999986533  345 7888766

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.31  E-value=6.3e-11  Score=97.14  Aligned_cols=216  Identities=15%  Similarity=0.071  Sum_probs=124.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccc-cCC----C-CCccccCceeecC----ChhhHh-------hc
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFP----G-KKTRFFPGVMIAE----EPQWRD-------CI   87 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~----~-~~~~~~~~~d~~~----~~~~~~-------~~   87 (328)
                      ..|||||++.||.+++++|+++|++|++++|+.++..+ +..    . .........+..+    .+.+.+       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999998764321 110    0 0000011122222    222222       23


Q ss_pred             CCCcEEEECCCCCCCCCC--------------ChhHHHHHHHhhhhhHHHHHHHHhcCC-------CCCCcEEEEecccc
Q 020254           88 QGSTAVVNLAGTPIGTRW--------------SSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATAL  146 (328)
Q Consensus        88 ~~~d~vi~~a~~~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~~v~~Ss~~v  146 (328)
                      .++|++||+||.......              ...........|..+............       .....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            479999999997533211              123344555666666555555444320       11223444444332


Q ss_pred             eeecCCCcccccCCCCCCCch-HHHHHHHHHHHHhccc---CCCeEEEEEeceEEcCCCcchhhhHHHHHHHcCCCCCCC
Q 020254          147 GYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSG  222 (328)
Q Consensus       147 ~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  222 (328)
                        ..         ..|....| .+|...+.....++.+   .|+++..+.||.+..+.... .....  ......|++  
T Consensus       163 --~~---------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-~~~~~--~~~~~~pl~--  226 (266)
T d1mxha_         163 --DL---------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-QETQE--EYRRKVPLG--  226 (266)
T ss_dssp             --GS---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-HHHHH--HHHTTCTTT--
T ss_pred             --cc---------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-HHHHH--HHHhcCCCC--
Confidence              11         12233456 5677666665555443   48999999999987664321 11111  222233332  


Q ss_pred             CcccccccHHHHHHHHHHHhhCCC--CCc-eEEecCCCcc
Q 020254          223 QQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV  259 (328)
Q Consensus       223 ~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~~i~~~~~~  259 (328)
                         +-+..++|+|.+++.++....  ..| ++.+.+|-.+
T Consensus       227 ---r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         227 ---QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             ---SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence               224679999999999997643  345 8888887544

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.27  E-value=1.1e-10  Score=98.61  Aligned_cols=165  Identities=12%  Similarity=0.030  Sum_probs=106.7

Q ss_pred             CCeEEEEc--CCchhHHHHHHHHHhCCCeEEEEecCCCcccc-------------cCCCCCcc-----------------
Q 020254           23 QMTVSVTG--ATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------------IFPGKKTR-----------------   70 (328)
Q Consensus        23 ~~~ilI~G--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~-----------------   70 (328)
                      .+..||||  ++..||.++++.|.++|.+|++..++......             ........                 
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            36789999  55699999999999999999988765431110             00000000                 


Q ss_pred             ------ccCceeecCChhhHhhc-------CCCcEEEECCCCCCC-----CCCChhHHHHHHHhhhhhHHHHHHHHhcCC
Q 020254           71 ------FFPGVMIAEEPQWRDCI-------QGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP  132 (328)
Q Consensus        71 ------~~~~~d~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  132 (328)
                            ....+|+.+.+.+++++       .++|++||+||....     .+...+.+...+++|+.+...+++++.+.-
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                  00112444555444433       479999999986432     234567888999999999988888887742


Q ss_pred             CCCCcEEEEecccceeecCCCcccccCCCCC-CCch-HHHHHHHHHHHHhccc----CCCeEEEEEeceEEc
Q 020254          133 EGVRPSVLVSATALGYYGTSETEVFDESSPS-GNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLG  198 (328)
Q Consensus       133 ~~~~~~v~~Ss~~v~~yg~~~~~~~~e~~~~-~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~v~g  198 (328)
                      ....++|.+||.+.  ...         .|. ...| .+|...+.+...++.+    +|+++..|.||.|-.
T Consensus       162 ~~~GsIv~iss~~~--~~~---------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 KPQSSIISLTYHAS--QKV---------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccccccceeehh--ccc---------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            23457888887665  221         121 2346 6777766666555432    489999999998754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.14  E-value=6.6e-12  Score=97.61  Aligned_cols=100  Identities=14%  Similarity=0.106  Sum_probs=72.2

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ..+.|+|+||||+|.||+.+++.|+++|++|++++|+..+.........   ......+|+.|.+++++++.++|+|||+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            4467899999999999999999999999999999999866543322110   0013357888999999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhh
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRV  120 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~  120 (328)
                      ||.. ......+.++...+.|+.+
T Consensus       100 Ag~g-~~~~~~e~~~~~~~~nv~~  122 (191)
T d1luaa1         100 GAIG-LELLPQAAWQNESSIEIVA  122 (191)
T ss_dssp             CCTT-CCCBCHHHHHTCTTCCEEE
T ss_pred             Cccc-cccCCHHHHHhhhcceeeh
Confidence            9863 2233344444444444433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.76  E-value=1.7e-08  Score=73.60  Aligned_cols=113  Identities=16%  Similarity=0.190  Sum_probs=80.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCc-eeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPG-VMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      ||.|+||+|.+|++++..|..+|.  ++..++.++.+......... ..+.. -......+..+.++++|+||.+||.+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~-~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHI-ETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTS-SSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhh-hhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC
Confidence            799999999999999999998884  78888886543222111100 00111 223356677788899999999999752


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .   ......+....|....+.+++.+.+  .+.+.++.+.|
T Consensus        81 ~---~g~sR~~ll~~N~~i~~~i~~~i~~--~~p~~iiivvt  117 (144)
T d1mlda1          81 K---PGMTRDDLFNTNATIVATLTAACAQ--HCPDAMICIIS  117 (144)
T ss_dssp             C---TTCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             C---CCCCcchHHHHHHHHHHHHHHHHHh--cCCCeEEEEec
Confidence            2   2234567788999999999999999  56667777665

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.52  E-value=1.1e-07  Score=69.20  Aligned_cols=111  Identities=14%  Similarity=0.180  Sum_probs=73.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHH-hCC--CeEEEEecCCCcccc---cCCCCCccccCcee-ecCChhhHhhcCCCcEEEEC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQ-ADN--HQVRVLTRSRSKAEL---IFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~-~~g--~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~   96 (328)
                      |||.|+|++|.+|++++-.|. +.+  .++..++..+.....   +.....   ..... +...++ .+.++++|+||.+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~---~~~~~~~~~~~~-~~~~~~aDvvvit   76 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT---AVKIKGFSGEDA-TPALEGADVVLIS   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCS---SCEEEEECSSCC-HHHHTTCSEEEEC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCcc---ccCCcEEEcCCC-ccccCCCCEEEEC
Confidence            799999999999999998875 433  689999876532111   111100   11112 222333 3568899999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ||.+..   ......+....|..-.+.+.+.+.+  ...+.++.+-|
T Consensus        77 aG~~~k---~g~~R~dl~~~N~~i~~~v~~~i~~--~~p~aivivvt  118 (145)
T d2cmda1          77 AGVRRK---PGMDRSDLFNVNAGIVKNLVQQVAK--TCPKACIGIIT  118 (145)
T ss_dssp             CSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             CCccCC---CCcchhhHHHHHHHHHHHHHHHHHh--hCCCcEEEEcc
Confidence            997532   2334567788999999999999998  45555544443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.51  E-value=4.9e-07  Score=65.62  Aligned_cols=104  Identities=19%  Similarity=0.227  Sum_probs=70.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcc--cccC---CCCCccccCceeec-CChhhHhhcCCCcEEEE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--ELIF---PGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~---~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~   95 (328)
                      |||.|+||+|.+|+.++..|+.+|  .++..+++++...  ....   .+.........++. ..+.-.+.++++|+||-
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            789999999999999999999988  4899999875321  1000   00000001112222 11222357789999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +||.+..   ......+.+..|..-.+.+++.+.+
T Consensus        81 tAG~~~~---~g~sR~dl~~~Na~iv~~i~~~i~~  112 (145)
T d1hyea1          81 TSGVPRK---EGMSRMDLAKTNAKIVGKYAKKIAE  112 (145)
T ss_dssp             CCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecccccC---CCCChhhhhhhhHHHHHHHHHHHhc
Confidence            9997522   2335678889999999999999988

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.50  E-value=5.1e-07  Score=65.51  Aligned_cols=70  Identities=16%  Similarity=0.143  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC----CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |+||.|+||||++|+.+++.|+++.    .+++.+.++............  .....+..+.    ..+.++|++|.+++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~--~~~~~~~~~~----~~~~~~DivF~a~~   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGT--TGTLQDAFDL----EALKALDIIVTCQG   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTC--CCBCEETTCH----HHHHTCSEEEECSC
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCC--ceeeecccch----hhhhcCcEEEEecC
Confidence            5799999999999999999888763    267777766554333221100  0111122121    23568999999985

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.48  E-value=7.6e-08  Score=70.23  Aligned_cols=114  Identities=16%  Similarity=0.234  Sum_probs=71.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      .++|||.|+|+ |++|..++..|+.+|  .+|+++++++..........   ....... -+. ..+. +.++++|+|+.
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~-~~~-~~d~-~~~~~adivvi   78 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPK-KIY-SGEY-SDCKDADLVVI   78 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCC-EEE-ECCG-GGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCc-eEe-eccH-HHhccccEEEE
Confidence            34679999995 999999999999887  58999998864322110000   0000111 111 1122 34678999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ++|....   ......+....|..-.+.+++.+.+  .+.+.++.+.|
T Consensus        79 tag~~~~---~g~~r~~l~~~N~~i~~~~~~~i~~--~~p~aivivvt  121 (146)
T d1ez4a1          79 TAGAPQK---PGESRLDLVNKNLNILSSIVKPVVD--SGFDGIFLVAA  121 (146)
T ss_dssp             CCCC-------------CHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             ecccccC---CCCCHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEeC
Confidence            9986522   2344667778999999999999999  56666666655

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.37  E-value=1.5e-07  Score=69.60  Aligned_cols=104  Identities=16%  Similarity=0.209  Sum_probs=67.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCC--cccccC---CCCCccccCceeecCChhhHhhcCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRS--KAELIF---PGKKTRFFPGVMIAEEPQWRDCIQG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~   89 (328)
                      .+|||.|+||+|++|++++..|...+.       .+..+.-...  ......   ....  ....-.....+...+.+++
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTEEEEEEESCHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc--cccccccccCCchhhhccc
Confidence            567999999999999999999988652       1222222211  111100   0000  0001123334456688899


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +|+||.++|..   .....+..+.+..|..-.+.+.+.+.+
T Consensus        81 advViitaG~~---~~pg~~r~dl~~~N~~i~~~~~~~i~k  118 (154)
T d1y7ta1          81 ADYALLVGAAP---RKAGMERRDLLQVNGKIFTEQGRALAE  118 (154)
T ss_dssp             CSEEEECCCCC---CCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEeecCcC---CCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999975   233445678889999999999999988

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.34  E-value=5.1e-07  Score=64.84  Aligned_cols=73  Identities=14%  Similarity=0.248  Sum_probs=56.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      |+|+|+|+ |.+|+.+++.|.+.|++|+++++++............ .....|..|++.++++ ++++|+++-+..
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~-~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKIKTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhh-hhccCcccchhhhhhcChhhhhhhcccCC
Confidence            79999996 9999999999999999999999998765544321110 1233577788888777 478999998754

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.30  E-value=1.4e-06  Score=63.18  Aligned_cols=113  Identities=17%  Similarity=0.190  Sum_probs=76.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCC---CCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|| |.+|+.++..|+..|  .++..+++++........   ...........+...++ .+.++++|+|+.++|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            78999996 999999999999887  589999988865332211   00000011222322222 356789999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+....|..-.+.+++.+.+  ...+.++.+-|
T Consensus        79 ~~~~---~g~~r~~l~~~N~~i~~~i~~~i~~--~~p~aivivvt  118 (142)
T d1guza1          79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMK--HSKNPIIIVVS  118 (142)
T ss_dssp             CCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCSSCEEEECC
T ss_pred             cCCC---CCCchHHHHHHHHHHHHHHHHHhhc--cCCCeEEEEec
Confidence            7522   2334567888999999999999988  45556655544

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.28  E-value=1.8e-06  Score=62.39  Aligned_cols=111  Identities=16%  Similarity=0.187  Sum_probs=70.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||.|+|+ |.+|+.++-.|+.++.  ++.++++++.......   .+.. ..........  .-.+.++++|+|+.+||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~-~~~~~~~~~~--~~~~~~~~adivvitag   77 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL-PFMGQMSLYA--GDYSDVKDCDVIVVTAG   77 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC-CCTTCEEEC----CGGGGTTCSEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCc-ccCCCeeEee--CcHHHhCCCceEEEecc
Confidence            58999996 9999999999998874  8999998876532111   1100 0011122222  22456788999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ..   ........+....|..-.+.+++.+.+  ...+.++.+-|
T Consensus        78 ~~---~~~~~~r~~l~~~N~~i~~~i~~~i~~--~~p~ai~ivvt  117 (142)
T d1y6ja1          78 AN---RKPGETRLDLAKKNVMIAKEVTQNIMK--YYNHGVILVVS  117 (142)
T ss_dssp             C---------CHHHHHHHHHHHHHHHHHHHHH--HCCSCEEEECS
T ss_pred             cc---cCcCcchhHHhhHHHHHHHHHHHHhhc--cCCCceEEEec
Confidence            64   223345678888999999999999998  45555555544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.25  E-value=4.4e-07  Score=68.89  Aligned_cols=75  Identities=17%  Similarity=0.237  Sum_probs=54.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .++|+|+|| |++|+++++.|.++||+|++++|+..+...+............+..+.......+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            378999996 999999999999999999999999988777655432111111222234455666778898887653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.23  E-value=8e-06  Score=58.95  Aligned_cols=69  Identities=20%  Similarity=0.199  Sum_probs=41.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC----CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+||||++|+.|++.|++..    .++..++.+........-...  .....+..+    ...++++|+||.|+.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~--~~~~~~~~~----~~~~~~~DvvF~alp   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD--AGMLHDAFD----IESLKQLDAVITCQG   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSC--CCBCEETTC----HHHHTTCSEEEECSC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCc--ceeeecccc----hhhhccccEEEEecC
Confidence            789999999999999999988743    366666554433222111000  000111112    234578999999975

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.22  E-value=3.7e-06  Score=62.92  Aligned_cols=104  Identities=13%  Similarity=0.185  Sum_probs=70.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCCCccc--ccC---CCCCccccCc-eeecCChhhHhhcC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAE--LIF---PGKKTRFFPG-VMIAEEPQWRDCIQ   88 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~--~~~---~~~~~~~~~~-~d~~~~~~~~~~~~   88 (328)
                      .+.||.|+||+|.||++++-.|++.+       ..++.++.......  ...   ....   +.. -...-.++..+.++
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a---~~~~~~~~~~~~~~~~~~   99 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL---YPLLREVSIGIDPYEVFE   99 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---CTTEEEEEEESCHHHHTT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc---cccccCccccccchhhcc
Confidence            34589999999999999999998742       15666666543211  100   0000   111 12223445678889


Q ss_pred             CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcC
Q 020254           89 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  131 (328)
Q Consensus        89 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (328)
                      ++|+||-++|.+   ........+.+..|..-.+.+.+++.+.
T Consensus       100 ~aDvVvi~ag~~---rkpg~tR~Dll~~N~~I~k~~~~~i~~~  139 (175)
T d7mdha1         100 DVDWALLIGAKP---RGPGMERAALLDINGQIFADQGKALNAV  139 (175)
T ss_dssp             TCSEEEECCCCC---CCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEeeccC---CCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999875   3344566788999999999999999983

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.22  E-value=2e-06  Score=63.19  Aligned_cols=122  Identities=13%  Similarity=0.121  Sum_probs=79.2

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCc-ccc--CceeecCChhhHhhcCCCcEEE
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKT-RFF--PGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ++.+++||.|+|+ |.+|+.++..|...+ .++.+++.++............ ..+  ...........++.++++|+|+
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVv   81 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI   81 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEE
Confidence            3455679999997 999999998888777 4899998877543222111000 000  0111222344567889999999


Q ss_pred             ECCCCCCCCCC--ChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           95 NLAGTPIGTRW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        95 ~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+++.......  ......+....|..-.+.+++.+.+  .+.+.++.+.|
T Consensus        82 itag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~--~~p~aiviivs  130 (154)
T d1pzga1          82 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK--YCPKTFIIVVT  130 (154)
T ss_dssp             ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEECC
T ss_pred             EecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHh--cCCCcEEEEeC
Confidence            99987533211  1124456778899999999999998  45566666655

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.20  E-value=1.7e-06  Score=63.15  Aligned_cols=115  Identities=23%  Similarity=0.213  Sum_probs=73.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ....||.|+|+ |.+|++++..|+.+|.  ++..+++.+..........   .........+... + .+.++++|+|+.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-d-~~~l~daDvvvi   80 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG-D-YDDCRDADLVVI   80 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC-C-GGGTTTCSEEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEEC-C-HHHhccceeEEE
Confidence            34568999996 9999999999998874  7999998765422111000   0000111222211 1 256788999999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           96 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        96 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +++....   ......+....|..-.+.+++.+.+  ...+.++.+-|
T Consensus        81 tag~~~~---~~~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~~ivvt  123 (148)
T d1ldna1          81 CAGANQK---PGETRLDLVDKNIAIFRSIVESVMA--SGFQGLFLVAT  123 (148)
T ss_dssp             CCSCCCC---TTTCSGGGHHHHHHHHHHHHHHHHH--HTCCSEEEECS
T ss_pred             ecccccc---cCcchhHHHHHHHHHHHHHHHHHHh--hCCCceEEEec
Confidence            9997532   2233456677899999999999888  45555555543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=5.2e-06  Score=61.88  Aligned_cols=72  Identities=15%  Similarity=0.074  Sum_probs=49.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||+|+|+ |.+|+.++..|.+.||+|++++|++............  .......-.....+.+..+|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD--GSIFNESLTANDPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT--SCEEEEEEEESCHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCC--ccccccccccchhhhhcccceEEEeec
Confidence            79999996 9999999999999999999999998765543321110  111111111122344567999999854

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.17  E-value=2.7e-06  Score=63.50  Aligned_cols=65  Identities=25%  Similarity=0.265  Sum_probs=47.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|.| .|.+|+.+++.|.+.||+|++++|++...........      +|..  .+..+.++++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~------~~~~--~~~~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL------VDEA--GQDLSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS------CSEE--ESCGGGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc------ccee--eeecccccccccccccC
Confidence            7899998 5999999999999999999999998765444332211      1211  11124668899999875

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.17  E-value=1e-06  Score=63.68  Aligned_cols=112  Identities=18%  Similarity=0.225  Sum_probs=73.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCc--cccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT--RFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |||.|+|+ |.+|+.++..|+.++  .++..+++++............  .......+.. ++ .+.++++|+|+.+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~-~~-~~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GD-YADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CC-GGGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC-Cc-HHHhcCCCEEEEeccc
Confidence            79999996 999999999898876  5899999876543211100000  0011112221 22 3457899999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ...   ......+....|..-.+.+++.+.+  ...+.++.+-|
T Consensus        78 ~~~---~g~~r~dl~~~N~~I~~~i~~~i~~--~~p~aivivvt  116 (140)
T d1a5za1          78 PQK---PGETRLQLLGRNARVMKEIARNVSK--YAPDSIVIVVT  116 (140)
T ss_dssp             CCC---SSCCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEECS
T ss_pred             ccC---CCcchhhhhccccchHHHHHHHHHh--cCCCcEEEEeC
Confidence            532   2334567788899999999999998  45566666654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.16  E-value=2.6e-06  Score=61.53  Aligned_cols=113  Identities=14%  Similarity=0.144  Sum_probs=75.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCc---cccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+|+ |.+|..++..|+.+|  .++.++++++............   .......+....+. +.++++|+|+-.|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-~~~~~adiVvitag   78 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-GGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-HHhccccEEEEecc
Confidence            79999996 999999999998877  4799999876543211000000   00001122222233 57789999999998


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+..   ......+....|..-.+.+++.+.+  .+.+.++.+-|
T Consensus        79 ~~~~---~g~~r~~l~~~n~~i~~~i~~~i~~--~~p~aivivvt  118 (142)
T d1ojua1          79 LARK---PGMTRLDLAHKNAGIIKDIAKKIVE--NAPESKILVVT  118 (142)
T ss_dssp             CCCC---SSCCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEEECS
T ss_pred             ccCC---CCCchHHHHHHhhHHHHHHHHHHHh--hCCCcEEEEec
Confidence            6522   3334677888999999999999999  45566666655

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.13  E-value=3.2e-06  Score=61.02  Aligned_cols=113  Identities=14%  Similarity=0.205  Sum_probs=75.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccC---CCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +.||.|+|+ |.+|++++..|..+|.  ++.++++++.......   .+.. .......+...++. +.++++|+|+.+|
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~-~~~~~~~i~~~~~~-~~~~daDvVVita   77 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS-SFYPTVSIDGSDDP-EICRDADMVVITA   77 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG-GGSTTCEEEEESCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhcc-ccCCCceeecCCCH-HHhhCCcEEEEec
Confidence            358999996 9999999999998874  8999998875432110   0000 00111233233343 4578899999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      |.+..   ......+....|..-.+.+++.+.+  .+.+.++.+-|
T Consensus        78 G~~~~---~g~~R~dl~~~N~~i~~~i~~~i~~--~~p~ai~ivvt  118 (143)
T d1llda1          78 GPRQK---PGQSRLELVGATVNILKAIMPNLVK--VAPNAIYMLIT  118 (143)
T ss_dssp             CCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCTTSEEEECC
T ss_pred             ccccC---CCCchhhhhhhhHHHHHHHHHHHHh--hCCCeEEEEeC
Confidence            97522   2344567888999999999999998  45555655544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.08  E-value=2.8e-06  Score=62.51  Aligned_cols=106  Identities=11%  Similarity=0.114  Sum_probs=66.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCccc--ccCCCCCccccCc-eeecCChhhHhhcCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAE--LIFPGKKTRFFPG-VMIAEEPQWRDCIQGST   91 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~--~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d   91 (328)
                      ++|||.|+||+|.+|++++-.|++.+-       +++.++.+.....  .+........+.. ....-.+...+.++++|
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD   81 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence            468999999999999999999986531       4555555433211  1100000000111 12222334567888999


Q ss_pred             EEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           92 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        92 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +||-++|.+..   ......+.+..|..-.+.+.+.+.+
T Consensus        82 vVVitag~~~~---~g~sr~dll~~N~~i~k~~~~~i~k  117 (154)
T d5mdha1          82 VAILVGSMPRR---DGMERKDLLKANVKIFKCQGAALDK  117 (154)
T ss_dssp             EEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccCCC---CCCchhHHHHHhHHHHHHHHHHHHh
Confidence            99999997533   2233456678899999999998877

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.07  E-value=9.8e-07  Score=68.14  Aligned_cols=40  Identities=38%  Similarity=0.514  Sum_probs=36.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   63 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   63 (328)
                      |||.|+||+|.+|++|++.|++.||+|++.+|++++...+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            7899999999999999999999999999999998765443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.05  E-value=4e-06  Score=60.38  Aligned_cols=112  Identities=15%  Similarity=0.194  Sum_probs=72.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCc--ccccCCCCCc--cccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSK--AELIFPGKKT--RFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~--~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||.|+||+|.+|+.++..|+.++.  ++..++.....  ..........  .......+... +. +.++++|+|+.+||
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~-~~-~~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG-GY-EDTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC-CG-GGGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeC-CH-HHhhhcCEEEEecc
Confidence            799999999999999999999874  78888864321  1100000000  00011122211 22 34579999999999


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .+.   .......+.+..|..-.+.+++.+.+  .+.+.++.+-|
T Consensus        80 ~~~---~~g~~R~dl~~~N~~I~~~i~~~i~~--~~p~~i~ivvt  119 (142)
T d1o6za1          80 IPR---QPGQTRIDLAGDNAPIMEDIQSSLDE--HNDDYISLTTS  119 (142)
T ss_dssp             CCC---CTTCCHHHHHHHHHHHHHHHHHHHHT--TCSCCEEEECC
T ss_pred             ccc---ccCCchhhHHHHHHHHHHHHHHHHHh--cCCCceEEEec
Confidence            652   23345778899999999999999999  45555544443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.05  E-value=5.4e-06  Score=60.00  Aligned_cols=69  Identities=19%  Similarity=0.214  Sum_probs=43.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|+|.|+||||++|+.|++.|.+++|   ++..++.+.+........     .....+.+.+  ...+.++|++|.+++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-----~~~~~~~~~~--~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-----ESSLRVGDVD--SFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-----TEEEECEEGG--GCCGGGCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-----cccchhccch--hhhhccceEEEecCC
Confidence            58999999999999999999986543   777776555443332211     1111121221  223457999998875

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.02  E-value=4.9e-06  Score=61.38  Aligned_cols=73  Identities=25%  Similarity=0.280  Sum_probs=58.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|||+|+ |-+|+.+++.|.+.|. +|++..|+..+...+...     + +....+.+++.+.+.++|+||.+.+.
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~-----~-~~~~~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD-----L-GGEAVRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH-----H-TCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh-----h-hcccccchhHHHHhccCCEEEEecCC
Confidence            35679999996 9999999999999996 799999987766554432     1 24556778888899999999999875


Q ss_pred             C
Q 020254          100 P  100 (328)
Q Consensus       100 ~  100 (328)
                      +
T Consensus        95 ~   95 (159)
T d1gpja2          95 P   95 (159)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.01  E-value=3.9e-06  Score=61.65  Aligned_cols=115  Identities=14%  Similarity=0.156  Sum_probs=74.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCc-cccC-ceeecCChhhHhhcCCCcEEEECC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT-RFFP-GVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +..||.|+|+ |.+|+.++..|..+|.  ++..+++++............ ..+. ........+ .+.++++|+|+.+|
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d-~~~~~~adiVVitA   96 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD-YSVTANSKIVVVTA   96 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS-GGGGTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc-hhhcccccEEEEec
Confidence            4569999995 9999999999999985  899999876543211100000 0010 011112222 35678899999999


Q ss_pred             CCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           98 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      |.....   .....+....|..-.+.++..+.+  .+.+.++.+-|
T Consensus        97 g~~~~~---g~tR~~l~~~N~~i~~~i~~~i~~--~~p~aiiivvt  137 (160)
T d1i0za1          97 GVRQQE---GESRLNLVQRNVNVFKFIIPQIVK--YSPDCIIIVVS  137 (160)
T ss_dssp             SCCCCT---TCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEECS
T ss_pred             CCcccc---CcchHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEeC
Confidence            975332   233457778899999999999998  45555555444

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=98.01  E-value=1.2e-05  Score=57.93  Aligned_cols=113  Identities=13%  Similarity=0.153  Sum_probs=69.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +||.|+|+ |.+|..++-.|+.++ .++.+++..+...........   ........+....+. +.+.++|+||-+||.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-~~~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-HHhcCCCEEEEeeec
Confidence            68999995 999999999988776 489999987764322111000   000001112212222 345789999999997


Q ss_pred             CCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +..   ......+.+..|..-.+.+++.+.+  .+.+.++.+.|
T Consensus        80 ~~~---~~~~r~dl~~~N~~i~~~i~~~i~k--~~p~aivivvt  118 (142)
T d1uxja1          80 PRK---PGMSREDLIKVNADITRACISQAAP--LSPNAVIIMVN  118 (142)
T ss_dssp             C------------CHHHHHHHHHHHHHHHGG--GCTTCEEEECS
T ss_pred             cCC---cCcchhHHHhHHHHHHHHHHHHHhc--cCCCceEEEeC
Confidence            522   2344567778899999999999998  55566666644

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.00  E-value=7.2e-06  Score=63.26  Aligned_cols=76  Identities=25%  Similarity=0.349  Sum_probs=52.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcccc-----------CceeecCChhhHhhcCCCcE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF-----------PGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~d~~~~~~~~~~~~~~d~   92 (328)
                      |||.|.| .|++|..++..|++.||+|++++.++.....+........-           ..-.+.-..++.++++++|+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            7899998 79999999999999999999999987654443321100000           00112233456677788999


Q ss_pred             EEECCCCC
Q 020254           93 VVNLAGTP  100 (328)
Q Consensus        93 vi~~a~~~  100 (328)
                      ++.|...+
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99998764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.00  E-value=2.9e-05  Score=56.81  Aligned_cols=39  Identities=18%  Similarity=0.322  Sum_probs=35.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..++||.|+||.|.+|+.+++.|.+.||+|++.+|+...
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            456799999999999999999999999999999987643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.91  E-value=5.6e-06  Score=59.34  Aligned_cols=72  Identities=19%  Similarity=0.170  Sum_probs=57.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      |+++|.| .|.+|+++++.|.+.|++|++++.++............  ....|..+++.++++ +.++|.||-+.+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~--~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH--AVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSE--EEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCc--ceeeecccchhhhccCCccccEEEEEcC
Confidence            4688998 59999999999999999999999998877666544321  223577788888776 678999888765

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.90  E-value=1.6e-05  Score=59.41  Aligned_cols=69  Identities=10%  Similarity=0.050  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |++|+|+| .|.+|..+++.|.+.|+  +|+++++++..........    .  +|....+.-......+|.|+.+.-
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~----~--~~~~~~~~~~~~~~~~dlIila~p   71 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I--IDEGTTSIAKVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S--CSEEESCGGGGGGTCCSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh----c--chhhhhhhhhhhccccccccccCC
Confidence            56899998 69999999999999985  7888998876554433321    1  222112222233347899998863

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.90  E-value=5.8e-06  Score=61.79  Aligned_cols=75  Identities=13%  Similarity=0.169  Sum_probs=44.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      |+||.|+||||++|+.|++.|.+.. .+|..+..+......+..... ......++ ...+.+...+++|+|+.++..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p-~~~~~~~~-~~~~~~~~~~~~dvvf~a~p~   76 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFP-STLENSIL-SEFDPEKVSKNCDVLFTALPA   76 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCG-GGCCCCBC-BCCCHHHHHHHCSEEEECCST
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCc-hhhccccc-cccCHhHhccccceEEEcccc
Confidence            6799999999999999999999865 477766554433322211000 00011111 122233444579999988753

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.87  E-value=1.1e-05  Score=60.86  Aligned_cols=74  Identities=23%  Similarity=0.276  Sum_probs=44.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCC-C--cccccC---CCCCccccCceeecCChhhHhhcCCCcEEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR-S--KAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~-~--~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ||||.|+|||||+|+.|++.|.+.. ++|..+..+. .  ......   +...  ......+...++......++|++|.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dvvf~   78 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLK--GIVDLPLQPMSDVRDFSADVDVVFL   78 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGT--TTCCCBEEEESCGGGTCTTCCEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccc--cccccccccchhhhhhhcccceeec
Confidence            6899999999999999999999974 5666553322 1  111110   0000  0111122233344455678999999


Q ss_pred             CCC
Q 020254           96 LAG   98 (328)
Q Consensus        96 ~a~   98 (328)
                      +..
T Consensus        79 alp   81 (179)
T d2g17a1          79 ATA   81 (179)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            965

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.85  E-value=9.9e-06  Score=61.27  Aligned_cols=78  Identities=17%  Similarity=0.182  Sum_probs=46.2

Q ss_pred             ccCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeec-CChhhHhhcCCCcEEEECC
Q 020254           20 KASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        20 ~~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a   97 (328)
                      +++++||.|+||||++|+.|++.|.+.. .++..+..+.+..........  .....+.. .....+..+.++|+||.+.
T Consensus         2 s~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           2 SGEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFP--HLITQDLPNLVAVKDADFSNVDAVFCCL   79 (183)
T ss_dssp             CSSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCG--GGTTSCCCCCBCGGGCCGGGCSEEEECC
T ss_pred             CCCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccc--cccccccccchhhhhhhhcccceeeecc
Confidence            3456799999999999999999999875 477666544333222211000  00011111 1222234446799999887


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      ..
T Consensus        80 p~   81 (183)
T d2cvoa1          80 PH   81 (183)
T ss_dssp             SS
T ss_pred             cc
Confidence            53

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.83  E-value=1.1e-05  Score=60.35  Aligned_cols=75  Identities=23%  Similarity=0.186  Sum_probs=52.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+..+|+|+||+|-+|...++.+...|.+|+++++++++.......+.   -..+|..+...-.....++|+||++.|
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa---~~~i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccc---ceeeehhhhhhhhhccccccccccccc
Confidence            345689999999999999999999999999999998766554443321   111233222222233358999999876

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.83  E-value=6.2e-06  Score=59.75  Aligned_cols=115  Identities=11%  Similarity=0.058  Sum_probs=70.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCc-cccC--ceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT-RFFP--GVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~--~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +||.|+|+ |.+|..++..|+.+|  .++..+++++.+.......... ..+.  ...+.. .+ .+.++++|+||-+||
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~-~d-~~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI-ND-WAALADADVVISTLG   78 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE-SC-GGGGTTCSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec-cC-HHHhccccEEEEecc
Confidence            68999995 999999999999877  4899999876542211100000 0011  111111 12 245688999999998


Q ss_pred             CCCCCC-CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ...... .......+....|..-.+.+++.+.+  ...+.++.+-|
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~--~~p~aivivvt  122 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE--SGFHGVLVVIS  122 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEec
Confidence            642111 11223445677899999999999998  55666666655

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.82  E-value=2.9e-05  Score=56.34  Aligned_cols=118  Identities=11%  Similarity=0.108  Sum_probs=74.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCc-cccCceeec-CChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKT-RFFPGVMIA-EEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~-~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ++||.|+|+ |.+|+.++..|...+ .++.++++++............ ..+...+.. ......+.++++|+|+.+++.
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~   81 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence            468999995 999999998777776 4898999877653322111000 001111111 112234666889999999997


Q ss_pred             CCCCC--CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254          100 PIGTR--WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus       100 ~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .....  .......+.+..|..-.+.+++.+.+  ...+.++.+-|
T Consensus        82 ~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~--~~p~aivivvt  125 (150)
T d1t2da1          82 TKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK--NCPNAFIIVVT  125 (150)
T ss_dssp             SSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             ccCCCCCccccchhHHHHHHHHHHHHHHHHHHh--cCCCeEEEEec
Confidence            53321  11223556788899999999999998  45566666654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.81  E-value=0.00015  Score=54.43  Aligned_cols=74  Identities=24%  Similarity=0.333  Sum_probs=51.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc--ccccCCCCC----ccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKK----TRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |+|.|+| +|-.|.+++..|.+.|++|++.+|....  .........    .......++.-.++++++++++|+|+.+.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            7999999 5999999999999999999999985432  111111000    00011234445678889999999999975


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        80 p   80 (180)
T d1txga2          80 S   80 (180)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.78  E-value=8e-06  Score=61.87  Aligned_cols=74  Identities=16%  Similarity=0.087  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~   96 (328)
                      +..+|||+||+|.+|...++.....|.+|+++++++++.......+.   ..-+|..+.+..+..+     .++|+|+++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~  105 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDN  105 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhh---hhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence            45689999999999999999999999999999998876554444322   1124444554444333     379999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      .|
T Consensus       106 vG  107 (182)
T d1v3va2         106 VG  107 (182)
T ss_dssp             SC
T ss_pred             cC
Confidence            86

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.72  E-value=2.9e-05  Score=58.69  Aligned_cols=74  Identities=11%  Similarity=-0.034  Sum_probs=50.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-c--cCce---eecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-F--FPGV---MIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~---d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|+|+ |.+|..++..|.++||+|++++|++............. .  ....   ......+..+.++++|+||.+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            78999995 99999999999999999999999865533322111000 0  0000   0111235678889999999985


Q ss_pred             C
Q 020254           98 G   98 (328)
Q Consensus        98 ~   98 (328)
                      .
T Consensus        81 ~   81 (184)
T d1bg6a2          81 P   81 (184)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=6.3e-06  Score=60.48  Aligned_cols=116  Identities=12%  Similarity=0.161  Sum_probs=71.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCc-cccCce-eecCChhhHhhcCCCcEEEEC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT-RFFPGV-MIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~~~~-d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      .++.||.|+|+ |.+|+.++..|..+|.  ++.++++++............ ..+... ......+ .+.++++|+||.+
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d-~~~~~~adivvit   94 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD-YNVSANSKLVIIT   94 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS-GGGGTTEEEEEEC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc-hhhhccccEEEEe
Confidence            34468999995 9999999999999874  899999876442211000000 000000 1111122 2455789999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ||.+...   .....+.+..|..-.+.++..+.+  .+.+.++.+-|
T Consensus        95 ag~~~~~---~~~R~dll~~N~~i~~~i~~~i~~--~~p~~ivivvt  136 (159)
T d2ldxa1          95 AGARMVS---GQTRLDLLQRNVAIMKAIVPGVIQ--NSPDCKIIVVT  136 (159)
T ss_dssp             CSCCCCT---TTCSSCTTHHHHHHHHHHTTTHHH--HSTTCEEEECS
T ss_pred             cccccCC---CCCHHHHHHHHHHHHHHHHHHHhc--cCCCeEEEEeC
Confidence            9975332   233345677888888888888887  45555544443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.4e-05  Score=59.97  Aligned_cols=74  Identities=14%  Similarity=0.145  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh---c--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~--~~~d~vi~~   96 (328)
                      +..+|||+||+|.+|...++.+...|.+|+++++++.+.......+.   ..-+|..+.+..+++   .  .++|+|+++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~  104 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEM  104 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccccCc---ccccccccccHHHHhhhhhccCCceEEeec
Confidence            45689999999999999999999999999999988765444333222   112455454433332   2  268999999


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      .+
T Consensus       105 ~g  106 (174)
T d1yb5a2         105 LA  106 (174)
T ss_dssp             CH
T ss_pred             cc
Confidence            75

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.67  E-value=1.3e-05  Score=59.44  Aligned_cols=66  Identities=17%  Similarity=0.293  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |++|.|.| .|.+|+.+++.|+++||+|++.+|++.+........         ........+.+..+|+|+-+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~---------~~~~~~~~e~~~~~diii~~v~   66 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG---------ASAARSARDAVQGADVVISMLP   66 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT---------CEECSSHHHHHTSCSEEEECCS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhh---------ccccchhhhhccccCeeeeccc
Confidence            57899998 899999999999999999999999877655443321         1122345677788999999865

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=5.3e-05  Score=51.81  Aligned_cols=69  Identities=13%  Similarity=0.165  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      ..||.|+| +|.+|+-++....+.|+++++++.++..........    +...++.|.+.+.+...  ++|+|..-
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~----~i~~~~~d~~~l~~~~~~~~~DviT~E   81 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHR----SHVINMLDGDALRRVVELEKPHYIVPE   81 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSE----EEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCe----EEECCCCCHHHHHHHHHhhCCceEEEE
Confidence            45899999 699999999999999999999999877544433221    34467888888887764  68998654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=4.4e-05  Score=56.13  Aligned_cols=99  Identities=15%  Similarity=0.128  Sum_probs=58.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCccccc-CCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +.+||.|.|++|..|+.|++.+.+. +.++.+. +|........ .....  .....++.-.++++..++.+|+||.+..
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~--~~~~~~~~~~~~~~~~~~~~DViIDFs~   80 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELA--GAGKTGVTVQSSLDAVKDDFDVFIDFTR   80 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSS--SSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhh--ccccCCceeeccHHHHhcccceEEEecc
Confidence            3579999999999999999999875 5666554 4433321111 00000  0111222223445667788999999853


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                      .                   .++...++.|.+  .++ ++ .+.|++
T Consensus        81 p-------------------~~~~~~~~~a~~--~~~-~~-ViGTTG  104 (162)
T d1diha1          81 P-------------------EGTLNHLAFCRQ--HGK-GM-VIGTTG  104 (162)
T ss_dssp             H-------------------HHHHHHHHHHHH--TTC-EE-EECCCC
T ss_pred             H-------------------HHHHHHHHHHHh--ccc-ee-EEecCC
Confidence            2                   234477788888  333 33 444544

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.66  E-value=3.8e-05  Score=56.10  Aligned_cols=65  Identities=17%  Similarity=0.215  Sum_probs=48.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+| .|.+|+.+++.|++.||+|++.++.+.+.......       .+.+.  ++..++++++|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~--~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-------TVGVT--ETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-------HHTCE--ECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-------ccccc--ccHHHHHhhcCeEEEEec
Confidence            7899998 79999999999999999999988877654433211       11221  235667788999999864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.62  E-value=1.1e-05  Score=59.07  Aligned_cols=65  Identities=15%  Similarity=0.215  Sum_probs=49.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|.| +|-+|+++++.|++.|++|++.+|+.++...+....      ++..  ..+..++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~------g~~~--~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPY--AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCB--CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc------ceee--echhhhhhhccceeeeec
Confidence            7899998 799999999999999999999999877655443210      1222  234567778899999885

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.62  E-value=2e-05  Score=59.60  Aligned_cols=75  Identities=16%  Similarity=-0.006  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh---c--CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~--~~~d~vi~~   96 (328)
                      +..+|||+||+|.+|...++.+...|.+|+++++++++.......+.   ...+|..+.+..+++   .  .++|+||++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~  101 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNS  101 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccc---cccccCCccCHHHHHHHHhCCCCEEEEEec
Confidence            44689999999999999999999999999999998766554444322   112344444333333   2  369999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      .+.
T Consensus       102 ~g~  104 (183)
T d1pqwa_         102 LAG  104 (183)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            873

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.60  E-value=1.2e-05  Score=59.60  Aligned_cols=65  Identities=12%  Similarity=0.218  Sum_probs=51.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|.| .|.+|+.+++.|++.||+|++.+|++.+...+....       ...  .+...++++++|+|+-|..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~-------~~~--~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AET--ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhh-------hhh--cccHHHHHhCCCeEEEEcC
Confidence            7899999 799999999999999999999999987766554322       122  2345667778999999864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.58  E-value=4e-05  Score=58.09  Aligned_cols=76  Identities=18%  Similarity=0.242  Sum_probs=51.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCce----eecCChhhHhhcCCCcEEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVN   95 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~vi~   95 (328)
                      ..|+||.|+| +|-.|.+++..|.+.||+|++.+|++.....+...... .....+    ++.-..+++++++++|+|+.
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEE
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEE
Confidence            3456899999 69999999999999999999999986543322110000 001111    22233467888999999998


Q ss_pred             CC
Q 020254           96 LA   97 (328)
Q Consensus        96 ~a   97 (328)
                      +.
T Consensus        84 av   85 (189)
T d1n1ea2          84 VI   85 (189)
T ss_dssp             CS
T ss_pred             cC
Confidence            75

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.54  E-value=0.00014  Score=54.43  Aligned_cols=73  Identities=11%  Similarity=0.177  Sum_probs=55.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+|-|+| .|.+|..+++.|++.||+|++.+|++++...+....... .........+++.+.+..+|.++-+..
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-~~~~~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG-TKVLGAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTT-SSCEECSSHHHHHHHBCSSCEEEECSC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccc-ccccchhhhhhhhhhhcccceEEEecC
Confidence            5799999 799999999999999999999999998876654332100 111234456677788889999998864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=0.00013  Score=51.22  Aligned_cols=70  Identities=10%  Similarity=0.152  Sum_probs=49.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-----CCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a~   98 (328)
                      |||.|.|++|..|+.|.+.+.++|+++.+..-... ...+...     -.-+|++.|+...+.++     +.-.|+-..|
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-~~~~~~~-----DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-VEELDSP-----DVVIDFSSPEALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-EEECSCC-----SEEEECSCGGGHHHHHHHHHHHTCEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-HHHhccC-----CEEEEecCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence            68999999999999999999999998775532221 1121111     22379999988776664     6778888777


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus        75 ~   75 (128)
T d1vm6a3          75 L   75 (128)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=2e-05  Score=59.44  Aligned_cols=75  Identities=15%  Similarity=0.061  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~   96 (328)
                      +..+|+|+||+|.+|..+++.....|.+|+++++++.+.......+.   ..-+|..+.+..+++.     .++|+|+++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa---~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~  104 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDS  104 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC---eEEEECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence            34689999999999999999999999999999999887655543332   2235555554333332     268999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      .+.
T Consensus       105 ~g~  107 (179)
T d1qora2         105 VGR  107 (179)
T ss_dssp             SCG
T ss_pred             ccH
Confidence            863

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=5.5e-05  Score=47.74  Aligned_cols=40  Identities=30%  Similarity=0.312  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   61 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   61 (328)
                      +.++|+|+||+|-+|...++.+...|++|+++++++++.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            4568999999999999999999999999999999886644

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00013  Score=55.43  Aligned_cols=103  Identities=17%  Similarity=0.280  Sum_probs=63.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-------ccccC-c------------eeecCChh
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-------TRFFP-G------------VMIAEEPQ   82 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~-~------------~d~~~~~~   82 (328)
                      -+||.|+|| |.+|+.++..++..||+|+++++++...........       ..... .            ..+.-..+
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d   82 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD   82 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccch
Confidence            469999995 999999999999999999999998764321111000       00000 0            01122335


Q ss_pred             hHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254           83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus        83 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                      +.+++.++|.|+-+...                 |+..-+.++..+.+.  -...-++.|+++
T Consensus        83 ~~~a~~~ad~ViEav~E-----------------~l~~K~~v~~~l~~~--~~~~~ilasnTS  126 (192)
T d1f0ya2          83 AASVVHSTDLVVEAIVE-----------------NLKVKNELFKRLDKF--AAEHTIFASNTS  126 (192)
T ss_dssp             HHHHTTSCSEEEECCCS-----------------CHHHHHHHHHHHTTT--SCTTCEEEECCS
T ss_pred             hHhhhcccceehhhccc-----------------chhHHHHHHHHHhhh--cccCceeeccCc
Confidence            56778899999999753                 123334666666662  233445555544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=0.00019  Score=55.65  Aligned_cols=64  Identities=13%  Similarity=0.136  Sum_probs=44.7

Q ss_pred             cCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhH----hhcCCCcEEEECCCCC
Q 020254           30 GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR----DCIQGSTAVVNLAGTP  100 (328)
Q Consensus        30 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~d~vi~~a~~~  100 (328)
                      -.||..|.+|++.+..+|++|+++.-.......  ..     ...+.+...+++.    +.+.++|++|++|++.
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p--~~-----~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLPTP--PF-----VKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCC--TT-----EEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccCcc--cc-----cccceehhhHHHHHHHHhhhccceeEeeeechh
Confidence            458999999999999999999999776543221  00     2223444444443    4446899999999975

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.39  E-value=0.0001  Score=54.96  Aligned_cols=74  Identities=22%  Similarity=0.122  Sum_probs=50.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhc--CCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI--QGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~--~~~d~vi~~a~~   99 (328)
                      ..+|||.||+|.+|...++.....|.+|++.++++.+.......+.   -.-+|..+. ++.....  +++|+|+++.+.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA---KEVLAREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC---SEEEECC---------CCSCCEEEEEECSTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccc---ceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            4579999999999999999999999999999999887655544322   111222111 1111222  379999999874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.39  E-value=0.00036  Score=45.95  Aligned_cols=71  Identities=17%  Similarity=0.191  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc-CCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+|. |-.|.++++.|.++|++|++.+.+....... ...     ...+.+...+  ...+.+.|.||-.-|++
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d~vi~SPGi~   75 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-----AVERHTGSLN--DEWLMAADLIVASPGIA   75 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-----TSCEEESBCC--HHHHHHCSEEEECTTSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-----ccceeecccc--hhhhccCCEEEECCCCC
Confidence            4578999995 9999999999999999999999876533221 111     1122222211  23456789999987764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.38  E-value=0.00016  Score=52.74  Aligned_cols=67  Identities=27%  Similarity=0.341  Sum_probs=39.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ||.|+||||++|+.|++.|.+..+   ++..++.+.+........     .  -+....+..+..+.+.|.++.+++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~-----~--~~~~~~~~~~~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----D--QDITIEETTETAFEGVDIALFSAG   72 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEET-----T--EEEEEEECCTTTTTTCSEEEECSC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccccc-----C--CcccccccchhhhhhhhhhhhccC
Confidence            799999999999999999988754   444444332222211111     1  111111222334467899888875

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=4.6e-05  Score=57.09  Aligned_cols=71  Identities=20%  Similarity=0.133  Sum_probs=49.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   98 (328)
                      .+|||+||+|.+|...++.....|.+|+++++++.+.......+.   -.-+|..+.+. .+.+.  ..|.++++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGa---d~vi~~~~~~~-~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA---SRVLPRDEFAE-SRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE---EEEEEGGGSSS-CCSSCCCCEEEEEESSC
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcc---ccccccccHHH-HHHHHhhcCCeeEEEcc
Confidence            479999999999999999999999999999999887655443221   11123222222 23332  4699999876

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.32  E-value=5.7e-05  Score=55.12  Aligned_cols=64  Identities=16%  Similarity=0.190  Sum_probs=46.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.+.| +|-+|+++++.|++.| ++|++.+|++++...+....      .+...+.  . +.+.++|+||-+.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~------~~~~~~~--~-~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSAT--L-PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESS--C-CCCCTTSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc------ccccccc--c-ccccccceEEEec
Confidence            7899999 5999999999999877 99999999987665554321      1233322  1 2246689999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00013  Score=54.04  Aligned_cols=75  Identities=17%  Similarity=0.099  Sum_probs=54.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      .+..+|+|.|+ |.+|...++.+...|.+++++++++++.....+.+.   ..-+|..+.+......+++|++|.+.+.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa---d~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---DEVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC---cEEEECchhhHHHHhcCCCceeeeeeec
Confidence            34578999986 889999999999999999999988776543322221   1124555555555666789999999875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.29  E-value=4.2e-05  Score=56.70  Aligned_cols=73  Identities=23%  Similarity=0.165  Sum_probs=49.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecC--ChhhHhhc-CCCcEEEECCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDCI-QGSTAVVNLAGT   99 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~-~~~d~vi~~a~~   99 (328)
                      ..|||+||+|.+|...++.....|.+|+++++++.+.......+.   -.-+|..+  .+.+...- +++|+|+++.+.
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGa---d~vi~~~~~~~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA---SEVISREDVYDGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC---SEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcc---cceEeccchhchhhhcccCCCceEEEecCcH
Confidence            469999999999999999999999999999999887665544322   00112111  11111111 368999999874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.16  E-value=0.00036  Score=51.58  Aligned_cols=75  Identities=20%  Similarity=0.080  Sum_probs=53.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~   99 (328)
                      .+..+|+|+|+ |.+|...++.+...|.+|+++++++.+.......+.   ..-++..+. +..++...+.|.++.+.+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa---~~~i~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCC---cEEeeccchHHHHHhhhcccceEEEEecC
Confidence            34568999996 999999999888889999999999887654433221   111343333 3444555689999999775

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.15  E-value=0.0013  Score=44.92  Aligned_cols=71  Identities=10%  Similarity=0.066  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ..++|+|+| +|.+|..-++.|++.|.+|++++....+.......     ..++.+....--...+.+++.|+.+.+
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~dl~~~~lv~~at~   81 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFDETLLDSCWLAIAATD   81 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCCGGGGTTCSEEEECCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCCHHHhCCCcEEeecCC
Confidence            457999999 59999999999999999999998766543322211     112333322222345678899888754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.07  E-value=0.00047  Score=51.50  Aligned_cols=74  Identities=19%  Similarity=0.288  Sum_probs=50.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc-cCcee-ecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVM-IAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~d-~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||-|+| .|..|..++++|++.||+|++.+|++++...+........ ..... ..+.+.+...+..++.++-+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQ   77 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeec
Confidence            6899999 8999999999999999999999999887665533221000 11112 2234455556666777766643

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.04  E-value=0.00027  Score=52.39  Aligned_cols=73  Identities=14%  Similarity=0.103  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +.++|+|+| +|..+++++..|.+.|.+|+++.|+.++...+......  ...+...+.+..  ...++|+|||+...
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~--~~~~~~~~~~~~--~~~~~dliIN~Tp~   89 (170)
T d1nyta1          17 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDEL--EGHEFDLIINATSS   89 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGG--TTCCCSEEEECCSC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh--cccccccccccc--cccccceeeccccc
Confidence            457999999 58899999999999999999999998776554322110  111222333322  23578999999765

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.98  E-value=0.00011  Score=55.45  Aligned_cols=36  Identities=14%  Similarity=0.224  Sum_probs=32.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      -++|.|+|+ |.+|+.++..++..|++|+++++++..
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            468999996 999999999999999999999998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.00057  Score=51.21  Aligned_cols=77  Identities=9%  Similarity=0.116  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCC---C---ccccCceeecCChhhHhhcCCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK---K---TRFFPGVMIAEEPQWRDCIQGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~---~---~~~~~~~d~~~~~~~~~~~~~~d~vi   94 (328)
                      ..++|+|+|+ |..|++++..|.+.|. +|+++.|++....+.....   .   .......++.+.+.+.+.+..+|+||
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiI   95 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT   95 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceec
Confidence            4579999995 8899999999999885 8999999877544321100   0   00011245556677777788999999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      |+...
T Consensus        96 N~Tp~  100 (182)
T d1vi2a1          96 NGTKV  100 (182)
T ss_dssp             ECSST
T ss_pred             cccCC
Confidence            99865

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.94  E-value=0.0012  Score=49.29  Aligned_cols=63  Identities=24%  Similarity=0.254  Sum_probs=49.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...++|.|.| .|-||+.+++.|..-|.+|++.+|.+....          .     .-.++++++++.+|+|+.+...
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~----------~-----~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGP----------W-----RFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSS----------S-----CCBSCSHHHHTTCSEEEECCCC
T ss_pred             ccCceEEEec-cccccccceeeeeccccccccccccccccc----------e-----eeeechhhhhhccchhhccccc
Confidence            3467999999 799999999999999999999998764321          1     1123578899999999987654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.92  E-value=0.00068  Score=50.11  Aligned_cols=74  Identities=23%  Similarity=0.167  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec----CChhhHhhc-----CCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA----EEPQWRDCI-----QGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~-----~~~d~   92 (328)
                      ...+|+|+| +|.+|...++.+...|.+|+++++++.+.........   ...+...    +.+.+.+.+     .++|+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga---~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGA---DVTLVVDPAKEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCC---cEEEeccccccccchhhhhhhcccccCCce
Confidence            446899998 6999999999999999999999998877554333221   0001111    112222222     36999


Q ss_pred             EEECCCC
Q 020254           93 VVNLAGT   99 (328)
Q Consensus        93 vi~~a~~   99 (328)
                      ||.+++.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.90  E-value=0.00027  Score=52.37  Aligned_cols=75  Identities=19%  Similarity=0.128  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~   95 (328)
                      ...+|+|+|++|-+|...++.+...| .+|+++++++.+.......+.   ...++..+.+..++..     .++|+||.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~~d~vid  103 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVID  103 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC---ceeeccCCcCHHHHHHHHhhcccchhhhc
Confidence            44689999999999999999999888 589989888766544332211   1123444444333333     25899999


Q ss_pred             CCCC
Q 020254           96 LAGT   99 (328)
Q Consensus        96 ~a~~   99 (328)
                      +++.
T Consensus       104 ~~g~  107 (170)
T d1jvba2         104 LNNS  107 (170)
T ss_dssp             SCCC
T ss_pred             cccc
Confidence            9874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.84  E-value=0.00044  Score=51.07  Aligned_cols=67  Identities=15%  Similarity=0.256  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+| +|..|++++..|.+.|. +|+++.|+.++...+...     +....+ +.  .  ...++|+|||+...
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~-----~~~~~~-~~--~--~~~~~DliINaTpi   83 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL-----YGYAYI-NS--L--ENQQADILVNVTSI   83 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH-----HTCEEE-SC--C--TTCCCSEEEECSST
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh-----hhhhhh-hc--c--cccchhhheecccc
Confidence            357899999 59999999999999995 899999988765544321     111111 11  1  12468999999764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.83  E-value=0.0032  Score=41.36  Aligned_cols=76  Identities=13%  Similarity=0.093  Sum_probs=49.9

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      +.+...++|.+.|-.|--=++|++.|.++||+|.+.++..+.....+...      ++.+..... .+.++++|.||...
T Consensus         3 ~~~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~------Gi~v~~g~~-~~~i~~~d~vV~S~   75 (96)
T d1p3da1           3 PEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQA------GAKIYIGHA-EEHIEGASVVVVSS   75 (96)
T ss_dssp             CCCTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHT------TCEEEESCC-GGGGTTCSEEEECT
T ss_pred             ccchhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHC------CCeEEECCc-cccCCCCCEEEECC
Confidence            34556789999985443337889999999999999999865543332211      233332222 23357899999998


Q ss_pred             CCC
Q 020254           98 GTP  100 (328)
Q Consensus        98 ~~~  100 (328)
                      ++.
T Consensus        76 AI~   78 (96)
T d1p3da1          76 AIK   78 (96)
T ss_dssp             TSC
T ss_pred             CcC
Confidence            864

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.79  E-value=0.00025  Score=52.59  Aligned_cols=73  Identities=14%  Similarity=0.146  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|+|+| +|..+++++..|.+.+-+|+++.|+.++...+......  ...+...+.+  ...+..+|+|||+...
T Consensus        17 ~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~--~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          17 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP--YGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh--ccccchhhhc--cccccccceeeecccc
Confidence            457899999 58889999999998888999999998765544321100  1111111111  2235689999999765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.0015  Score=48.17  Aligned_cols=74  Identities=19%  Similarity=0.060  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeec--CChhhHhhc-----CCCcEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIA--EEPQWRDCI-----QGSTAV   93 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~-----~~~d~v   93 (328)
                      ...+|+|+|+ |.+|...++.+...|. +|+++++++.+.......+.   ...++..  +.....+.+     .++|+|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~g~Dvv  101 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA---DLVLQISKESPQEIARKVEGQLGCKPEVT  101 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---SEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC---cccccccccccccccccccccCCCCceEE
Confidence            3458999986 9999999999999997 79999998876554333221   1111221  222222222     378999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      |.+.|.
T Consensus       102 id~~G~  107 (171)
T d1pl8a2         102 IECTGA  107 (171)
T ss_dssp             EECSCC
T ss_pred             EeccCC
Confidence            999874

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.70  E-value=0.00096  Score=50.56  Aligned_cols=38  Identities=29%  Similarity=0.476  Sum_probs=31.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   63 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   63 (328)
                      |||.|.| .|++|..++..| +.||+|++++.++.....+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            7899998 899999998766 5799999999987765444

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.69  E-value=0.00044  Score=51.42  Aligned_cols=74  Identities=12%  Similarity=-0.019  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChhhH---hhc--CCCcEEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVN   95 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~   95 (328)
                      +..+|+|.|+ |.+|...++.+...|. +|+++++++.+.......+.   ..-+|..+.+..+   +..  .++|+||.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa---~~~i~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA---TDILNYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC---SEEECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc---cccccccchhHHHHHHHHhhccCcceEEE
Confidence            4458999985 9999999999999996 79999988766443332211   1123444433333   332  25999999


Q ss_pred             CCCC
Q 020254           96 LAGT   99 (328)
Q Consensus        96 ~a~~   99 (328)
                      +++.
T Consensus       103 ~~g~  106 (174)
T d1jqba2         103 AGGG  106 (174)
T ss_dssp             CSSC
T ss_pred             ccCC
Confidence            9985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.69  E-value=0.00083  Score=48.82  Aligned_cols=78  Identities=9%  Similarity=0.082  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  101 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  101 (328)
                      .+-+|+|+| .|-.|..-++.....|.+|++++.+....+.+.....  ........+.+.+++.++++|+||.++-+++
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--~~~~~~~~~~~~l~~~~~~aDivI~aalipG  107 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVELLYSNSAEIETAVAEADLLIGAVLVPG  107 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEEEECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--ccceeehhhhhhHHHhhccCcEEEEeeecCC
Confidence            356999999 5999999999999999999999999877665543211  0222344577788999999999999998764


Q ss_pred             C
Q 020254          102 G  102 (328)
Q Consensus       102 ~  102 (328)
                      .
T Consensus       108 ~  108 (168)
T d1pjca1         108 R  108 (168)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.69  E-value=0.00096  Score=50.44  Aligned_cols=65  Identities=17%  Similarity=0.089  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|.| .|.||+.+++.|..-|.+|+++++........            +....++++++++.+|+|+.+...
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~------------~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK------------KGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------TTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc------------ceeeeccccccccccccccccCCc
Confidence            357999999 89999999999999999999998765432221            112345678888889988877654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.69  E-value=0.002  Score=47.48  Aligned_cols=66  Identities=11%  Similarity=0.208  Sum_probs=44.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      +++||.|.| +|.+|+.+++.|.+. +.+++++..+......           .......++......++|+|+.++..
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-----------~~~~~~~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-----------KTPVFDVADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-----------SSCEEEGGGGGGTTTTCSEEEECSCT
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc-----------ccccccchhhhhhccccceEEEeCCC
Confidence            346899999 799999999999875 5777766544322111           11222334455666789999998753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.66  E-value=0.0037  Score=40.30  Aligned_cols=71  Identities=11%  Similarity=0.077  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      .|||-++|-.|-==++|++.|+++|++|.+.|+..+.....+...      ++.+.-..+ .+.++++|.||...++.
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~------Gi~i~~gh~-~~~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKL------GIPIFVPHS-ADNWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT------TCCEESSCC-TTSCCCCSEEEECTTCC
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHC------CCeEEeeec-ccccCCCCEEEEecCcC
Confidence            378999986554445799999999999999999876543333221      133321111 23346799999998874

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.64  E-value=0.00096  Score=49.89  Aligned_cols=74  Identities=20%  Similarity=0.148  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCh--h----hHhhc--CCCcE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP--Q----WRDCI--QGSTA   92 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~--~----~~~~~--~~~d~   92 (328)
                      ...+|||+|+ |-+|...++.+...|. +|+++++++.+.....+.+.   -.-+|..+.+  +    +.+..  .++|+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~~vi~~~~~~~~~~~~~i~~~~~~~g~Dv  103 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA---DLTLNRRETSVEERRKAIMDITHGRGADF  103 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccccc---eEEEeccccchHHHHHHHHHhhCCCCceE
Confidence            3468999996 9999999999999996 89999998876554433221   1113333322  1    22222  26899


Q ss_pred             EEECCCC
Q 020254           93 VVNLAGT   99 (328)
Q Consensus        93 vi~~a~~   99 (328)
                      ||.+.|.
T Consensus       104 vid~vG~  110 (182)
T d1vj0a2         104 ILEATGD  110 (182)
T ss_dssp             EEECSSC
T ss_pred             EeecCCc
Confidence            9999875

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.57  E-value=0.0035  Score=43.98  Aligned_cols=72  Identities=21%  Similarity=0.245  Sum_probs=47.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-----CCcEEEECCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLAG   98 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a~   98 (328)
                      ||.|.|++|..|+.+++.+.+. ++++.+..-.............   -.-+|++.|+...+.++     +.-.|+-..|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~---DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNT---EVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTC---SEEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccC---CEEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            6999999999999999998764 5776654433222222111110   23378888887766553     6778887776


Q ss_pred             C
Q 020254           99 T   99 (328)
Q Consensus        99 ~   99 (328)
                      .
T Consensus        78 ~   78 (135)
T d1yl7a1          78 F   78 (135)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.0014  Score=40.94  Aligned_cols=38  Identities=26%  Similarity=0.202  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   61 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   61 (328)
                      ||+|.|+| +|.+|+-++..-.+.|+++++++-.+....
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa   38 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAA   38 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGG
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCcc
Confidence            47899999 699999999999999999999998765543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.52  E-value=0.0075  Score=41.94  Aligned_cols=89  Identities=15%  Similarity=0.193  Sum_probs=59.6

Q ss_pred             cCCCeEEEEcCC---chhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEEC
Q 020254           21 ASQMTVSVTGAT---GFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL   96 (328)
Q Consensus        21 ~~~~~ilI~Gat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   96 (328)
                      ..+++|.|+|||   +..|..+.+.|.+.| ++|+.+..+.....              .+.-..++.++-..+|.++-+
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~--------------G~~~y~sl~dlp~~vDlvvi~   71 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ--------------GVKAYKSVKDIPDEIDLAIIV   71 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET--------------TEECBSSTTSCSSCCSEEEEC
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC--------------CeEeecchhhcCCCCceEEEe
Confidence            356799999999   999999999998766 68988754332111              111233444555679999988


Q ss_pred             CCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEecc
Q 020254           97 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  144 (328)
Q Consensus        97 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~  144 (328)
                      ...                   ..+..+++.|.+  .+++.++.+|+.
T Consensus        72 vp~-------------------~~~~~~~~~~~~--~g~~~~vi~s~G   98 (129)
T d2csua1          72 VPK-------------------RFVKDTLIQCGE--KGVKGVVIITAG   98 (129)
T ss_dssp             SCH-------------------HHHHHHHHHHHH--HTCCEEEECCCS
T ss_pred             cCh-------------------HHhHHHHHHHHH--cCCCEEEEeccc
Confidence            542                   223356676666  588888777764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.51  E-value=0.0016  Score=49.05  Aligned_cols=67  Identities=18%  Similarity=0.151  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|.| .|-||+.+++.|..-|.+|.+.++........          ...+...++++++++.+|+|+.+...
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----------~~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVER----------ALGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH----------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcccccchh----------hhccccccchhhccccCCEEEEeecc
Confidence            457999999 79999999999999999999998865432211          11222344677777788887776654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.002  Score=47.55  Aligned_cols=76  Identities=17%  Similarity=0.177  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCchhHHH--HHHHHHhC----CCeEEEEecCCCcccccCCCC---CccccCceeecCChhhHhhcCCCcEE
Q 020254           23 QMTVSVTGATGFIGRR--LVQRLQAD----NHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      .|||.|.|| |.+|..  ++..|+..    +.+|+.+++++.+........   .........+....+.+++++++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            479999996 888865  44455543    359999999876543211000   00001234555666788999999999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      +..++.
T Consensus        81 v~~~~~   86 (171)
T d1obba1          81 INTAMV   86 (171)
T ss_dssp             EECCCT
T ss_pred             eeeccc
Confidence            999875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.47  E-value=0.0043  Score=45.89  Aligned_cols=74  Identities=11%  Similarity=0.091  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChh----hHhhc--CCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ----WRDCI--QGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~--~~~d~vi   94 (328)
                      +..+|+|+|+ |.+|...++.+...| .+|+++++++++...-...+.   ...+|..+.+.    +.+..  .++|++|
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA---~~~in~~~~~~~~~~~~~~~~g~G~d~vi  104 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGA---TECISPKDSTKPISEVLSEMTGNNVGYTF  104 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCC---cEEECccccchHHHHHHHHhccccceEEE
Confidence            3458999985 999999999999998 589999999887654433322   11233333332    22222  4799999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      .+.+.
T Consensus       105 ~~~g~  109 (176)
T d1d1ta2         105 EVIGH  109 (176)
T ss_dssp             ECSCC
T ss_pred             EeCCc
Confidence            99875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.00077  Score=50.72  Aligned_cols=73  Identities=18%  Similarity=0.079  Sum_probs=46.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCChhh---Hhhc-CCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW---RDCI-QGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~-~~~d~vi~~a~   98 (328)
                      .+|||+||+|-+|...++.....|.+ |+++++++++...+......  ..-+|..+.+..   ++.. +++|+|+++.|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga--d~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF--DAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC--SEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc--eEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            57999999999999999999889964 55556665554433221110  112444443322   2222 37999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.42  E-value=0.0016  Score=47.80  Aligned_cols=75  Identities=23%  Similarity=0.137  Sum_probs=50.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHh---hcCCCcEEEECC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CIQGSTAVVNLA   97 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~d~vi~~a   97 (328)
                      .+..+|+|.|+ |.+|...++.+...|.+|+++++++.+.......+.   ..-+|..+.+..++   ...+.+.++.++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~g~~~~i~~~  101 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA---SLTVNARQEDPVEAIQRDIGGAHGVLVTA  101 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHSSEEEEEECC
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc---cccccccchhHHHHHHHhhcCCccccccc
Confidence            34568999985 999999999998899999999998876554433322   11244444444333   334667777776


Q ss_pred             CC
Q 020254           98 GT   99 (328)
Q Consensus        98 ~~   99 (328)
                      +.
T Consensus       102 ~~  103 (166)
T d1llua2         102 VS  103 (166)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.38  E-value=0.0033  Score=43.05  Aligned_cols=37  Identities=22%  Similarity=0.312  Sum_probs=33.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      ..+++|+|.| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            3457999999 599999999999999999999998764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.37  E-value=0.0025  Score=50.16  Aligned_cols=38  Identities=32%  Similarity=0.338  Sum_probs=33.7

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      ++.+.+||+|+| +|..|-..+..|.++|++|+++.|..
T Consensus         2 ~~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           2 MMHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            455667999999 59999999999999999999999864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.30  E-value=0.0039  Score=42.96  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..++|+|.| +|++|-.++..|.++|.+|+++.+++..
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence            357999999 5999999999999999999999998753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.30  E-value=0.0027  Score=48.00  Aligned_cols=64  Identities=22%  Similarity=0.216  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|.| .|-||+.+++.|..-|.+|+++++.......          ..++.   .+++++++.+|+|+.+...
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------~~~~~---~~l~~l~~~~D~v~~~~pl  107 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----------PDFDY---VSLEDLFKQSDVIDLHVPG  107 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC----------TTCEE---CCHHHHHHHCSEEEECCCC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchhhh----------cchhH---HHHHHHHHhcccceeeecc
Confidence            347999999 7999999999999999999999986543221          11222   3567777888988777643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.29  E-value=0.012  Score=41.44  Aligned_cols=86  Identities=13%  Similarity=0.040  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++++|.|+|+|   +..|..+++.|.+.||+|+.+.-+..   +         ..  ...-..++.++-..+|.|+-+..
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~---~---------i~--G~~~~~sl~dlp~~iD~v~i~vp   83 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE---E---------VL--GRKCYPSVLDIPDKIEVVDLFVK   83 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---E---------ET--TEECBSSGGGCSSCCSEEEECSC
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc---c---------cC--CCcccccccccCccceEEEEEeC
Confidence            46799999998   78999999999999999987743321   1         11  11123345555567899888854


Q ss_pred             CCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           99 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      .                   .....+++.|.+  .+++. +++.+
T Consensus        84 ~-------------------~~~~~~~~e~~~--~g~k~-v~~~~  106 (139)
T d2d59a1          84 P-------------------KLTMEYVEQAIK--KGAKV-VWFQY  106 (139)
T ss_dssp             H-------------------HHHHHHHHHHHH--HTCSE-EEECT
T ss_pred             H-------------------HHHHHHHHHHHH--hCCCE-EEEec
Confidence            2                   223466676666  46654 44443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.27  E-value=0.0012  Score=48.92  Aligned_cols=74  Identities=12%  Similarity=0.058  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCChhhHhh---c-CCCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I-QGSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~-~~~d~vi~~   96 (328)
                      ...+|+|.|+ |.+|...++.+...|.+ |++.++++.+.......+.   ..-+|..+.+..+++   . .++|+||.+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~i~~~t~gg~D~vid~  103 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA---THVINSKTQDPVAAIKEITDGGVNFALES  103 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC---eEEEeCCCcCHHHHHHHHcCCCCcEEEEc
Confidence            4568999996 99999999999888864 5566666655443322211   112344444333322   2 268999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      .+.
T Consensus       104 ~G~  106 (174)
T d1f8fa2         104 TGS  106 (174)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.27  E-value=0.0042  Score=42.83  Aligned_cols=38  Identities=16%  Similarity=0.191  Sum_probs=33.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..+++++|.| +|+||-.++..|.+.|.+|+++.+++.-
T Consensus        21 ~~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          21 EIPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecccc
Confidence            3468999999 5999999999999999999999987653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.0041  Score=46.57  Aligned_cols=64  Identities=14%  Similarity=0.037  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|.| .|.||+.+++.|..-|.+|++.++.......             .....+.++++++.+|+|+.+...
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-------------~~~~~~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-------------NATQVQHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-------------TCEECSCHHHHHHHCSEEEECCCS
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-------------hhhhhhhHHHHHhhccceeecccC
Confidence            457999998 8999999999999999999999876542211             111224677888889998887764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.0038  Score=42.86  Aligned_cols=76  Identities=13%  Similarity=0.088  Sum_probs=52.4

Q ss_pred             ccCCCeEEEEcCCc----------hhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-
Q 020254           20 KASQMTVSVTGATG----------FIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-   88 (328)
Q Consensus        20 ~~~~~~ilI~GatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-   88 (328)
                      ....+||||+|+..          +-+.+.++.|.+.|++++.+..++.....-.....   ..-++-...+.+.+.++ 
T Consensus         4 ~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD---~lYfePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           4 RTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMAD---ATYIEPIHWEVVRKIIEK   80 (127)
T ss_dssp             CSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSS---EEECSCCCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcc---eeeeecCCHHHHHHHHHH
Confidence            34568999999733          88999999999999999999888765332211111   11123335667777774 


Q ss_pred             -CCcEEEECCC
Q 020254           89 -GSTAVVNLAG   98 (328)
Q Consensus        89 -~~d~vi~~a~   98 (328)
                       ++|.|+-..|
T Consensus        81 E~pd~il~~~G   91 (127)
T d1a9xa3          81 ERPDAVLPTMG   91 (127)
T ss_dssp             HCCSEEECSSS
T ss_pred             hCcCCeEEEee
Confidence             8999988766

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.0043  Score=42.39  Aligned_cols=37  Identities=19%  Similarity=0.273  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      -+++|+|.| .|++|-.++..|.+.|.+|+++.|.+..
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            357999999 5999999999999999999999997653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.20  E-value=0.004  Score=46.00  Aligned_cols=75  Identities=16%  Similarity=0.100  Sum_probs=50.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCChh-hHhhc-----CCCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCI-----QGSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~-----~~~d~v   93 (328)
                      .+..+|+|.|+ |.+|...++.+...|. +|+++++++++.......+.   ..-+|..+.+. +.+..     .+.|+|
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa---~~~i~~~~~d~~~~~~~~~~~~~G~d~v  101 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA---TECLNPKDYDKPIYEVICEKTNGGVDYA  101 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC---cEEEcCCCchhHHHHHHHHhcCCCCcEE
Confidence            34468999995 9999999999998885 79999998877654444332   11234433332 22222     379999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      |.+++.
T Consensus       102 id~~g~  107 (174)
T d1p0fa2         102 VECAGR  107 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCC
Confidence            999875

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.20  E-value=0.0027  Score=47.60  Aligned_cols=68  Identities=16%  Similarity=0.128  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|.| .|.||+.+++.|..-|.+|.+.++.........         ...+....+++++++.+|+|+.+...
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------~~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK---------ELNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH---------HHTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc---------cccccccCCHHHHHHhccchhhcccc
Confidence            457999999 799999999999999999999998754332211         12233455677788888888776654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.19  E-value=0.021  Score=38.74  Aligned_cols=61  Identities=11%  Similarity=0.152  Sum_probs=42.8

Q ss_pred             CeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ++|.|.|+|   +..|..+.+.|++.||+|+.+..+...            ..  .+.-..++.++-..+|.++-+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~------------i~--G~~~y~sl~~lp~~~D~vvi~vp   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE------------IE--GLKCYRSVRELPKDVDVIVFVVP   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE------------ET--TEECBSSGGGSCTTCCEEEECSC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc------------cc--CccccccchhccccceEEEEEeC
Confidence            579999988   789999999999999999877432211            11  12223345555567899988753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.14  E-value=0.0045  Score=42.36  Aligned_cols=36  Identities=14%  Similarity=0.382  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      .+++|+|.| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus        21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          21 ESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence            468999999 599999999999999999999998764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0049  Score=44.38  Aligned_cols=72  Identities=11%  Similarity=0.099  Sum_probs=52.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      .+|+|+|. |-+|+.+++.|.+.|++|++++.++......    ....  ..+...|..|++.++++ ++++|+||-+..
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~--~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN--ADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT--CEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCC--cEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            47999995 9999999999999999999999887542211    1111  01334677788888655 468999998864

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.10  E-value=0.0019  Score=46.86  Aligned_cols=73  Identities=12%  Similarity=0.094  Sum_probs=40.1

Q ss_pred             cCCCeEEEEcCCchhHHHH-HHHHHhCC-CeEEEE-ecCCCccc-ccCCCCCccccCceeecCChhhHhhc--CCCcEEE
Q 020254           21 ASQMTVSVTGATGFIGRRL-VQRLQADN-HQVRVL-TRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVV   94 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l-~~~L~~~g-~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi   94 (328)
                      ++++||.|+| +|.+|+.+ .+.|.+.. .+++++ +|++.... ......    .........+.+.+..  .++|+||
T Consensus         2 ~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~----~i~~~~~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           2 NQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM----GVTTTYAGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             CSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT----TCCEESSHHHHHHHSGGGGGEEEEE
T ss_pred             CCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc----CCcccccceeeeeecccccccCEEE
Confidence            4567999999 89999865 45554443 467776 55544221 111100    1112222234444433  4789999


Q ss_pred             ECCC
Q 020254           95 NLAG   98 (328)
Q Consensus        95 ~~a~   98 (328)
                      .+..
T Consensus        77 ~ATp   80 (157)
T d1nvmb1          77 DATS   80 (157)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            9853

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.08  E-value=0.012  Score=43.37  Aligned_cols=75  Identities=17%  Similarity=0.114  Sum_probs=48.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCh-hhHhhc-----CCCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCI-----QGSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~-----~~~d~v   93 (328)
                      ....+|+|+| .|.+|...++.+...|. .|++.++++.+.......+.   ..-++....+ ......     .++|+|
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~d~v  102 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA---TDCLNPRELDKPVQDVITELTAGGVDYS  102 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC---CcccCCccchhhhhhhHhhhhcCCCcEE
Confidence            3446899998 59999999999999996 68788887766443333221   1112322222 222222     479999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      |.++|.
T Consensus       103 ie~~G~  108 (174)
T d1e3ia2         103 LDCAGT  108 (174)
T ss_dssp             EESSCC
T ss_pred             EEeccc
Confidence            999985

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0033  Score=45.43  Aligned_cols=68  Identities=18%  Similarity=0.116  Sum_probs=52.0

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...|++.|.| .|.+|+.+++.|...|.+|++....|.+.-+..          .|-.....+++++...|+|+-+.|.
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~----------~dG~~v~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA----------MEGYEVTTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------HTTCEECCHHHHTTTCSEEEECSSC
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh----------cCceEeeehhhhhhhccEEEecCCC
Confidence            3457899999 999999999999999999999999875432221          1222233577888899999999875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.06  E-value=0.0077  Score=41.52  Aligned_cols=36  Identities=22%  Similarity=0.359  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      ..++|+|.| .|++|-.++..|.+.|.+|+++.+.+.
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            457999999 599999999999999999999988764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=96.06  E-value=0.01  Score=41.10  Aligned_cols=93  Identities=12%  Similarity=0.123  Sum_probs=60.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC-CCcEEEECCCCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPI  101 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~~~~  101 (328)
                      .+|+|.| +|.+|+.|++.+.. .+|+++++-..........       ..++.+...+.+++..+ .+++++-+...  
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~-------I~Gi~V~~~~~l~~~~~~~i~iai~~i~~--   73 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRP-------VRGGVIEHVDLLPQRVPGRIEIALLTVPR--   73 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE-------ETTEEEEEGGGHHHHSTTTCCEEEECSCH--
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE-------ECCEEEecHHHHHHHHhhcccEEEEeCCH--
Confidence            4899999 59999999998754 4788887755443222111       33466677788887775 56666666431  


Q ss_pred             CCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEeccc
Q 020254          102 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  145 (328)
Q Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss~~  145 (328)
                                       ...+.+++.|.+  .+++.+.-++...
T Consensus        74 -----------------~~~~~I~d~l~~--~gIk~I~~f~~~~   98 (126)
T d2dt5a2          74 -----------------EAAQKAADLLVA--AGIKGILNFAPVV   98 (126)
T ss_dssp             -----------------HHHHHHHHHHHH--HTCCEEEECSSSC
T ss_pred             -----------------HHHHHHHHHHHH--cCCCEEeecCcee
Confidence                             123467788887  6787666655543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.00  E-value=0.0088  Score=43.85  Aligned_cols=77  Identities=13%  Similarity=0.138  Sum_probs=44.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEec-CCCcccc-cCCCCCccccC---------ceeecCChhhHhhcCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR-SRSKAEL-IFPGKKTRFFP---------GVMIAEEPQWRDCIQG   89 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~~-~~~~~~~~~~~---------~~d~~~~~~~~~~~~~   89 (328)
                      |++||.|-| .|.||+.+++.|.+++ .+|+++.. ++..... +..........         ...+.....+..+..+
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence            457999999 7999999999998865 67666643 3322111 11110000000         0001112245555678


Q ss_pred             CcEEEECCCC
Q 020254           90 STAVVNLAGT   99 (328)
Q Consensus        90 ~d~vi~~a~~   99 (328)
                      +|+|+.|.|.
T Consensus        80 vDvViEcTG~   89 (172)
T d2czca2          80 VDIIVDATPG   89 (172)
T ss_dssp             CSEEEECCST
T ss_pred             CCEEEECCCC
Confidence            9999999986

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0056  Score=42.38  Aligned_cols=36  Identities=17%  Similarity=0.272  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      +++|+|.| .|++|-.++..|.+.|.+|+++.|++.-
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            57999999 5999999999999999999999997643

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.99  E-value=0.0053  Score=45.32  Aligned_cols=75  Identities=13%  Similarity=0.098  Sum_probs=50.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCC-hhhHhhc-----CCCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-----QGSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~-----~~~d~v   93 (328)
                      .+..+|+|.|+ |.+|...+..+...| .+|+++++++.+.......+.   ..-++..+. +.+.+..     .++|++
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~D~v  102 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA---TECVNPQDYKKPIQEVLTEMSNGGVDFS  102 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC---eeEEecCCchhHHHHHHHHHhcCCCCEE
Confidence            34468999998 669999999999887 589999998887655444322   111233232 2233222     379999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      |.+.|.
T Consensus       103 id~~G~  108 (176)
T d2jhfa2         103 FEVIGR  108 (176)
T ss_dssp             EECSCC
T ss_pred             EecCCc
Confidence            999885

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.98  E-value=0.007  Score=41.45  Aligned_cols=38  Identities=24%  Similarity=0.199  Sum_probs=33.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..+++++|+| +|+||-.++..|.+.|.+|+++.++..-
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            3467999999 5999999999999999999999987653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.98  E-value=0.0049  Score=42.00  Aligned_cols=38  Identities=26%  Similarity=0.284  Sum_probs=33.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..+++++|.| .|++|-.++..|.+.|++|+++.|.+.-
T Consensus        19 ~~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          19 ALPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            3457999999 5999999999999999999999887643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.97  E-value=0.00056  Score=50.99  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccC-ceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ..++|+|+| +|..+++++..|.+.| +|+++.|+..+...+.......... .....+.+.+...+..+|++|++....
T Consensus        17 ~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~g   94 (177)
T d1nvta1          17 KDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIG   94 (177)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTT
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCccc
Confidence            457999999 5889999999998777 9999999877655443210000000 011123344555667899999997653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.96  E-value=0.0055  Score=42.25  Aligned_cols=34  Identities=21%  Similarity=0.226  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      .+++++|+| .|+||-.++..|.+.|.+|+++.|+
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            457899999 5999999999999999999999875

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.92  E-value=0.004  Score=46.68  Aligned_cols=68  Identities=16%  Similarity=0.118  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..++|.|.| .|.||+.+++.|..-|.+|.+.++..........         ......++++++++.+|+|+.+...
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS---------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH---------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc---------ccccccCCHHHHHhhCCeEEecCCC
Confidence            357999999 7999999999999999999999876553322111         1122345678888888988776654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.91  E-value=0.0042  Score=45.39  Aligned_cols=77  Identities=9%  Similarity=0.124  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCchhHHH-HHHHHHhC-----CCeEEEEecCCCcccccCCCCC---ccccCceeecCChhhHhhcCCCcEE
Q 020254           23 QMTVSVTGATGFIGRR-LVQRLQAD-----NHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAV   93 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~v   93 (328)
                      ..||.|.||.+ +|.. ++..|+..     +-+|+.++.++.+.........   ........+....+.+++++++|+|
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            35899999844 4543 44555542     1389999988765432111000   0001123334455678889999999


Q ss_pred             EECCCCC
Q 020254           94 VNLAGTP  100 (328)
Q Consensus        94 i~~a~~~  100 (328)
                      |.+++..
T Consensus        82 vitag~~   88 (167)
T d1u8xx1          82 MAHIRVG   88 (167)
T ss_dssp             EECCCTT
T ss_pred             EECCCcC
Confidence            9999864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.80  E-value=0.014  Score=42.59  Aligned_cols=80  Identities=15%  Similarity=0.055  Sum_probs=53.7

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceee--cCChhhHhhcCCCcEEEECCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      ...++|+|.|-+.-+|+.++..|+++|..|+.+.++...................++  ...+.+++....+|+||..+|
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG  106 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVP  106 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccC
Confidence            456899999999999999999999999999887765332211111100000001122  245667788888999999988


Q ss_pred             CC
Q 020254           99 TP  100 (328)
Q Consensus        99 ~~  100 (328)
                      .+
T Consensus       107 ~p  108 (171)
T d1edza1         107 SE  108 (171)
T ss_dssp             CT
T ss_pred             CC
Confidence            64

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.79  E-value=0.032  Score=40.64  Aligned_cols=119  Identities=8%  Similarity=-0.009  Sum_probs=66.8

Q ss_pred             CCeEEEEcC-CchhHHHHHHHHHhCC----CeEEEEecCCCcc--cccCCCC---CccccCceeecCChhhHhhcCCCcE
Q 020254           23 QMTVSVTGA-TGFIGRRLVQRLQADN----HQVRVLTRSRSKA--ELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTA   92 (328)
Q Consensus        23 ~~~ilI~Ga-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~   92 (328)
                      +|||.|.|| +.+.+..++..++...    -++..++.++...  .......   .........+....+..+.++++|+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDv   80 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF   80 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCE
Confidence            478999996 3345566666555432    3888888876532  1111000   0000112344455566788899999


Q ss_pred             EEECCCCCCCCC-----------------CChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           93 VVNLAGTPIGTR-----------------WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        93 vi~~a~~~~~~~-----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      ||.+++......                 +...........|+...+.+++.+.+  .....++++.|
T Consensus        81 Vv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~--~~pda~~i~vt  146 (169)
T d1s6ya1          81 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEE--LCPDAWLINFT  146 (169)
T ss_dssp             EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEECS
T ss_pred             EEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhh--cCCCeEEEEeC
Confidence            999998642110                 00001112223577777888888888  45666666655

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.78  E-value=0.0096  Score=43.88  Aligned_cols=33  Identities=21%  Similarity=0.431  Sum_probs=27.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS   56 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~   56 (328)
                      |.||.|-| .|.||+.+++.|.+++ .+|+++...
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            46899999 8999999999999875 788777543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.75  E-value=0.014  Score=42.78  Aligned_cols=77  Identities=14%  Similarity=0.022  Sum_probs=56.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceee----------------------cCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI----------------------AEE   80 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~----------------------~~~   80 (328)
                      +-+|+|+| .|-.|..-++.....|.+|++++.++...+++......  +..++.                      ...
T Consensus        29 pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~--~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          29 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK--FITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE--ECCC-----------------------CCHH
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc--eEEEeccccccccccccchhhcCHHHHHHHH
Confidence            45999999 49999999999999999999999999877666543210  111111                      123


Q ss_pred             hhhHhhcCCCcEEEECCCCCCC
Q 020254           81 PQWRDCIQGSTAVVNLAGTPIG  102 (328)
Q Consensus        81 ~~~~~~~~~~d~vi~~a~~~~~  102 (328)
                      +.+.+.+.++|+||-++-.++.
T Consensus       106 ~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHhhhhheeeeecCCc
Confidence            4566778899999999987644

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.74  E-value=0.011  Score=43.50  Aligned_cols=75  Identities=9%  Similarity=0.065  Sum_probs=47.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecC-ChhhHhhc-----CCCcEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCI-----QGSTAV   93 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~-----~~~d~v   93 (328)
                      .+..+|+|.|+ |.+|...++.+...|. .|++.++++.+.......+.   -.-+|..+ .+.+.+.+     .++|+|
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa---~~~i~~~~~~~~~~~~~~~~~~~g~D~v  102 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---TECINPQDFSKPIQEVLIEMTDGGVDYS  102 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC---cEEEeCCchhhHHHHHHHHHcCCCCcEe
Confidence            34468999997 6789999999998885 67777776665443332221   11133332 23333332     379999


Q ss_pred             EECCCC
Q 020254           94 VNLAGT   99 (328)
Q Consensus        94 i~~a~~   99 (328)
                      |.+.|.
T Consensus       103 id~~G~  108 (176)
T d2fzwa2         103 FECIGN  108 (176)
T ss_dssp             EECSCC
T ss_pred             eecCCC
Confidence            999874

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.68  E-value=0.012  Score=41.10  Aligned_cols=37  Identities=22%  Similarity=0.344  Sum_probs=33.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..++|+|.| +|++|-.++..|.+.|.+|+++.+.+..
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            457999999 5999999999999999999999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.65  E-value=0.0081  Score=41.33  Aligned_cols=35  Identities=26%  Similarity=0.431  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      .++|+|.| .|++|-.++..|.+.|++|+++.|++.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            46899999 599999999999999999999988753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.64  E-value=0.0056  Score=45.57  Aligned_cols=66  Identities=24%  Similarity=0.160  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ..+++.|+| .|.||+.+++.+..-|.+|++.++...+......        .+   ...+++++++.+|+|+.+...
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--------~~---~~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--------GI---ELLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--------TC---EECCHHHHHHHCSEEEECCCC
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc--------Cc---eeccHHHHHhhCCEEEEcCCC
Confidence            457899999 7999999999999999999999887654332111        11   223567778888888777654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.019  Score=38.79  Aligned_cols=75  Identities=8%  Similarity=0.021  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCc----------hhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--C
Q 020254           22 SQMTVSVTGATG----------FIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--G   89 (328)
Q Consensus        22 ~~~~ilI~GatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~   89 (328)
                      ..++|||+|+..          +-+.+.++.|.+.|++++.+..+|.....-.....   ..-++-...+.+.+.++  +
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD---~lYfeplt~e~v~~Ii~~E~   79 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSD---RLYFEPVTLEDVLEIVRIEK   79 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSS---EEECCCCSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcC---ceEEccCCHHHHHHHHHHhC
Confidence            457999999633          88999999999999999999888765432211111   01122235566666664  8


Q ss_pred             CcEEEECCCC
Q 020254           90 STAVVNLAGT   99 (328)
Q Consensus        90 ~d~vi~~a~~   99 (328)
                      +|.|+-..|.
T Consensus        80 p~~ii~~~GG   89 (121)
T d1a9xa4          80 PKGVIVQYGG   89 (121)
T ss_dssp             CSEEECSSST
T ss_pred             CCEEEeehhh
Confidence            9998877663

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.57  E-value=0.011  Score=44.56  Aligned_cols=68  Identities=18%  Similarity=0.144  Sum_probs=48.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-CCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~~   99 (328)
                      ...++|+|-| .|-+|+++++.|.+.|.+|++.+.++.........       ..+..+.+   +++ .++|+++-||..
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~-------g~~~~~~~---~~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL-------GHTAVALE---DVLSTPCDVFAPCAMG   93 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-------TCEECCGG---GGGGCCCSEEEECSCS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh-------cccccCcc---ccccccceeeeccccc
Confidence            4568999999 89999999999999999999888766543332211       13333433   334 479999999753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.43  E-value=0.0091  Score=41.12  Aligned_cols=38  Identities=18%  Similarity=0.226  Sum_probs=33.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..+++++|.| .|+||-.++..|.+.|.+|+++.|++..
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            3467999999 5999999999999999999999998754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.41  E-value=0.0097  Score=41.10  Aligned_cols=37  Identities=14%  Similarity=0.155  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      .+++++|.| .|+||-.++..|.+.|.+|+++.+.+.-
T Consensus        25 ~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          25 VPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             CCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            367999999 5999999999999999999999987643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.02  Score=41.30  Aligned_cols=57  Identities=19%  Similarity=0.334  Sum_probs=44.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  100 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  100 (328)
                      ...++|+|.|-+..+|+.|+..|.++|..|+.+.+...                       .+.+..+++|+||.++|.+
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-----------------------~l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-----------------------NLRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-----------------------CHHHHHHHCSEEEECSCCT
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhccccccccccc-----------------------hhHHHHhhhhHhhhhccCc
Confidence            45689999999999999999999999999988754332                       2344556678888877754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.016  Score=42.72  Aligned_cols=38  Identities=21%  Similarity=0.305  Sum_probs=34.1

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..+++|+|+| +|.-|-..+..|.++||+|+++.+.+..
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCcc
Confidence            4578999999 5999999999999999999999997654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=95.23  E-value=0.0017  Score=46.93  Aligned_cols=63  Identities=16%  Similarity=0.109  Sum_probs=37.9

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |-++| +|.+|+++++.|.+.++.+.+.+|++.+...+.....      ...   .+..++++.+|+||-+.-
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~------~~~---~~~~~~~~~~DiVil~v~   64 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG------GKA---ATLEKHPELNGVVFVIVP   64 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC------CCC---CSSCCCCC---CEEECSC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc------ccc---cchhhhhccCcEEEEecc
Confidence            45677 7999999999886644444678898877666544321      111   234466778999998863

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.21  E-value=0.013  Score=47.68  Aligned_cols=35  Identities=23%  Similarity=0.502  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      +|||+|+| +|.-|-..|..|.+.|++|.++.++..
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            57999999 599999999999999999999988764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.13  E-value=0.052  Score=42.15  Aligned_cols=37  Identities=19%  Similarity=0.198  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKA   60 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   60 (328)
                      ..+|+|.| .|.+|++++..|...|. +++++|...-..
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~   67 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSL   67 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCG
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccch
Confidence            46999999 69999999999999995 788887654433

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.011  Score=42.03  Aligned_cols=36  Identities=19%  Similarity=0.376  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~   58 (328)
                      |++|.|+|+||-||....+-+.+.  .++|.+++-..+
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence            578999999999999999988876  478888876543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.12  E-value=0.011  Score=43.37  Aligned_cols=72  Identities=19%  Similarity=0.188  Sum_probs=46.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-----CCCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~   96 (328)
                      ..+|+|.|+ |.+|...++.+...| ..|+++++++.+.......+.   ..-+|. +.+.+++..     .++|+||.+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga---~~~i~~-~~~~~~~~~~~~~~~g~d~vid~  107 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA---DHVVDA-RRDPVKQVMELTRGRGVNVAMDF  107 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC---SEEEET-TSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccc---ceeecC-cccHHHHHHHhhCCCCceEEEEe
Confidence            458999985 999999999998777 577777887765544433221   111222 223333333     269999999


Q ss_pred             CCC
Q 020254           97 AGT   99 (328)
Q Consensus        97 a~~   99 (328)
                      ++.
T Consensus       108 ~g~  110 (172)
T d1h2ba2         108 VGS  110 (172)
T ss_dssp             SCC
T ss_pred             cCc
Confidence            885

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.07  E-value=0.012  Score=45.24  Aligned_cols=69  Identities=14%  Similarity=0.155  Sum_probs=49.2

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhc-CCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~~   99 (328)
                      ...++|+|-| .|-+|+++++.|.+.|.+|++.+.+.........      ....+..+.++   ++ .+||+++-||-.
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~------~~g~~~~~~~~---~~~~~cDIl~PcA~~  106 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA------EEGADAVAPNA---IYGVTCDIFAPCALG  106 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------HHCCEECCGGG---TTTCCCSEEEECSCS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH------hcCCcccCCcc---cccccccEecccccc
Confidence            4567999999 7999999999999999999988776544332221      11233434433   33 479999999874

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.047  Score=39.54  Aligned_cols=37  Identities=16%  Similarity=0.182  Sum_probs=32.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      ...++|.|.|-+..+|+.|+..|+++|..|+.+.+..
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            4568999999999999999999999999999876644

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.01  E-value=0.0085  Score=43.70  Aligned_cols=73  Identities=23%  Similarity=0.077  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~vi~~a~   98 (328)
                      ...+|+|.|+ |-+|...++.+...|.+|+++++++.+.......+.   ..-++..+.+   .+.+.-.+.+.+|.+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCc---ceecccccchhhhhcccccCCCceEEeecC
Confidence            3468999875 999999999999999999999998877654443321   1112222322   23333456777777765

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.84  E-value=0.025  Score=38.52  Aligned_cols=37  Identities=19%  Similarity=0.132  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ..++|+|.| +|++|-.++..|...|.+|+++.|.+.-
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence            357999999 5999999999999999999999997643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.82  E-value=0.014  Score=41.55  Aligned_cols=36  Identities=39%  Similarity=0.496  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~   58 (328)
                      |++|.|+|+||-||....+-+.+.  .++|.+++-..+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence            579999999999999999999775  488888876543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.75  E-value=0.0089  Score=41.54  Aligned_cols=70  Identities=14%  Similarity=0.119  Sum_probs=50.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhh-cCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~   98 (328)
                      ++|+|.| .|-+|+.+++.|.  +++|.+++.++...........  .+...|..+++.++++ +.+++.++-+..
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~--~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGA--NFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTC--EEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCc--cccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            4688998 5999999999984  6678888888876554433221  1334677788877765 468999998753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.73  E-value=0.022  Score=44.53  Aligned_cols=36  Identities=22%  Similarity=0.238  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      .+||+|+| .|..|..++..|.++|++|+++.|++..
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~~   39 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQP   39 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            46899999 5999999999999999999999987643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.70  E-value=0.014  Score=41.90  Aligned_cols=68  Identities=13%  Similarity=0.147  Sum_probs=52.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      ...|+++|.| -|++|+.+++.|...|-+|+++..+|-+.-+-...       ++.+   ..++++++..|+||-+.|.
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~md-------Gf~v---~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVME-------GFNV---VTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTT-------TCEE---CCHHHHTTTCSEEEECCSS
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhc-------CCcc---CchhHccccCcEEEEcCCC
Confidence            3457899999 89999999999999999999999888554332221       2232   3567888999999999885

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.67  E-value=0.034  Score=40.54  Aligned_cols=32  Identities=19%  Similarity=0.460  Sum_probs=26.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEec
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR   55 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r   55 (328)
                      |++|.|-| .|.||+.+.+.|.+++ .+|+++..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            57899998 8999999999998876 56666643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.58  E-value=0.011  Score=44.12  Aligned_cols=38  Identities=18%  Similarity=0.168  Sum_probs=32.3

Q ss_pred             CeEEE-EcCCchhHHHHHHHHHhCCCeEEEEecCCCccc
Q 020254           24 MTVSV-TGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   61 (328)
Q Consensus        24 ~~ilI-~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   61 (328)
                      .+|+| .||+|.+|...++.....|.+|++++|++....
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~   68 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD   68 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence            46777 589999999999999989999999998876543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.47  E-value=0.017  Score=43.30  Aligned_cols=75  Identities=17%  Similarity=0.070  Sum_probs=47.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCh---hhHhhcC--CCcEEE
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVV   94 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vi   94 (328)
                      ....+|+|+|+ |-+|...+..+...|. +|+++++++.+.......+.   ..-++-.+.+   .+.++..  ++|++|
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~i~~~t~g~g~D~vi   99 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF---EIADLSLDTPLHEQIAALLGEPEVDCAV   99 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---EEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccc---cEEEeCCCcCHHHHHHHHhCCCCcEEEE
Confidence            34568999985 9999888888877775 88888888766544333221   0011111222   2333332  689999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      .+.|.
T Consensus       100 d~vG~  104 (195)
T d1kola2         100 DAVGF  104 (195)
T ss_dssp             ECCCT
T ss_pred             ECccc
Confidence            99885

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.45  E-value=0.02  Score=46.48  Aligned_cols=39  Identities=28%  Similarity=0.385  Sum_probs=34.1

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      ....+++|+|+| +|.-|-..+..|.++|++|+++.+++.
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            345678999999 599999999999999999999988654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.37  E-value=0.04  Score=36.61  Aligned_cols=40  Identities=15%  Similarity=0.032  Sum_probs=31.7

Q ss_pred             ccccCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           18 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        18 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      +..-..|+|+|.| +|.-|.-++..|.+..-+++.+.|++.
T Consensus        27 ~~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3445678999999 699999999999988767666666654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.37  E-value=0.021  Score=45.09  Aligned_cols=31  Identities=23%  Similarity=0.415  Sum_probs=29.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      |+|+| +|..|..++.+|.++|++|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            99999 59999999999999999999999865

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.36  E-value=0.02  Score=45.67  Aligned_cols=34  Identities=26%  Similarity=0.446  Sum_probs=31.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      |+|+|+|| |.-|-..+..|.++|++|+++.+++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            68999995 99999999999999999999988754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.36  E-value=0.022  Score=42.31  Aligned_cols=35  Identities=9%  Similarity=0.140  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   58 (328)
                      ++||+|.| +|..|-..+..|.++|+ +|+++.|++.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            47999999 59999999999999998 5999998764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.08  E-value=0.034  Score=40.64  Aligned_cols=74  Identities=15%  Similarity=0.093  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCChh-hHhhc-----CCCcEEE
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCI-----QGSTAVV   94 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~-----~~~d~vi   94 (328)
                      ...+|+|+|+ |-+|...+..+...| .+|+++++++.+.......+.   -.-+|..+.+. .++..     .++|+++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA---d~~in~~~~~~~~~~~~~~~~~~G~d~vi  103 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA---TDFVNPNDHSEPISQVLSKMTNGGVDFSL  103 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---CEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCC---cEEEcCCCcchhHHHHHHhhccCCcceee
Confidence            4458999996 668888887787776 589999988877655444332   11234333322 22222     3799999


Q ss_pred             ECCCC
Q 020254           95 NLAGT   99 (328)
Q Consensus        95 ~~a~~   99 (328)
                      .+.|.
T Consensus       104 d~~G~  108 (175)
T d1cdoa2         104 ECVGN  108 (175)
T ss_dssp             ECSCC
T ss_pred             eecCC
Confidence            99885

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.93  E-value=0.012  Score=42.78  Aligned_cols=76  Identities=12%  Similarity=0.053  Sum_probs=44.4

Q ss_pred             CeEEEEcCCchhHHHHHH-HHHh-C----CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQ-RLQA-D----NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~-~L~~-~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   97 (328)
                      |||.|.|| |-+|...+- .|+. .    ..++..++.++.+................++.-..+..+.++++|+||..+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            78999997 546665553 3332 1    358999999876543221100000011122222344578889999999999


Q ss_pred             CCC
Q 020254           98 GTP  100 (328)
Q Consensus        98 ~~~  100 (328)
                      +..
T Consensus        80 ~~~   82 (162)
T d1up7a1          80 RPG   82 (162)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            863

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.61  E-value=0.2  Score=31.74  Aligned_cols=31  Identities=13%  Similarity=0.156  Sum_probs=27.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR   55 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   55 (328)
                      |||||+| +|.=-.+|+..|.+..++|+++--
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecC
Confidence            7999999 688889999999998899988743

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.60  E-value=0.058  Score=41.40  Aligned_cols=38  Identities=16%  Similarity=0.211  Sum_probs=33.6

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      ...++|+|+| +|..|-..+..|.++|++|+++.++..-
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecccc
Confidence            4568999999 5999999999999999999999887643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.59  E-value=0.031  Score=40.44  Aligned_cols=67  Identities=18%  Similarity=0.230  Sum_probs=42.0

Q ss_pred             CCeEEEEcCCchhHHH-HHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           23 QMTVSVTGATGFIGRR-LVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~-l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +|||.|.| +|.+|+. ....|.+. +.+++++ ++++.........     + ++++  .+.++.+++++|+|+-+..
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~-----~-~~~~--~~~~~~l~~~~D~V~I~tp   70 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES-----W-RIPY--ADSLSSLAASCDAVFVHSS   70 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH-----H-TCCB--CSSHHHHHTTCSEEEECSC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhc-----c-cccc--cccchhhhhhccccccccc
Confidence            46899999 6999975 56666654 5777665 4555544333221     1 2333  3345666688999988753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.54  E-value=0.04  Score=39.17  Aligned_cols=34  Identities=12%  Similarity=0.291  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      ..++|||+|| |.+|..-++.|++.|.+|++++-.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4579999996 999999999999999999999643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.53  E-value=0.056  Score=38.55  Aligned_cols=36  Identities=19%  Similarity=0.335  Sum_probs=29.9

Q ss_pred             CCeEEEE-cCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           23 QMTVSVT-GATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~-GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      .++++|. .+.||+|..++..|.+.|++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3466665 24699999999999999999999998764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.49  E-value=0.054  Score=38.73  Aligned_cols=37  Identities=24%  Similarity=0.253  Sum_probs=29.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   63 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   63 (328)
                      ||.+.| .|..|..+++.|++.|+.+ +..|+.++....
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~   38 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRH   38 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHH
Confidence            689999 7999999999999999876 467776655443

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.49  E-value=0.052  Score=44.22  Aligned_cols=38  Identities=24%  Similarity=0.341  Sum_probs=32.3

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCc
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK   59 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   59 (328)
                      ..+|+|+|+| +|.-|-..+..|+++|  ++|+++.|+..-
T Consensus         2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~i   41 (335)
T d2gv8a1           2 PTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGSP   41 (335)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence            4568999999 5999999999998876  699999998653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.30  E-value=0.034  Score=44.61  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      |..|+|+| +|.-|..++++|.+.|++|.++.+++.
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            45799999 599999999999999999999988764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.28  E-value=0.05  Score=43.34  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=31.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      |||+|+| +|.-|-..+.+|.+.|++|+++.+++.
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            7899999 599999999999999999999987654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.15  E-value=0.14  Score=38.22  Aligned_cols=33  Identities=15%  Similarity=0.095  Sum_probs=27.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      |||+++| ++-.|..+++.|++.|++|.++...+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~   33 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHT   33 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            7899997 56689999999999999998766443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.26  Score=41.34  Aligned_cols=36  Identities=28%  Similarity=0.392  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   59 (328)
                      .+||||+|+ |.+|..+++.|...|. ++++++...-.
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve   73 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTID   73 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcc
Confidence            468999996 7799999999999996 78888886543

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.12  E-value=0.05  Score=40.53  Aligned_cols=34  Identities=21%  Similarity=0.243  Sum_probs=29.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS   58 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~   58 (328)
                      |||+|.| +|++|-.++..|.+.  +.+|+++.|.+.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~~   36 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGDF   36 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence            7999999 499999999999876  468999888653

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.91  E-value=0.073  Score=41.70  Aligned_cols=36  Identities=19%  Similarity=0.297  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   59 (328)
                      +++|+|+| .|.-|..++..|.+.| ++|.++.|++..
T Consensus         1 ~~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~~   37 (288)
T d3c96a1           1 PIDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSEI   37 (288)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence            47999999 5999999999999999 589999987643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.78  E-value=0.068  Score=38.79  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRS   58 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~   58 (328)
                      .+||+|+| .|++|-.++..|.+.++  +|+++.+.+.
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~~   38 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNTD   38 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence            47999999 59999999999998774  7888877653

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.53  E-value=0.2  Score=36.21  Aligned_cols=27  Identities=22%  Similarity=0.359  Sum_probs=21.6

Q ss_pred             cccCCCeEEEEcCCchhHHHHHHHHHhC
Q 020254           19 QKASQMTVSVTGATGFIGRRLVQRLQAD   46 (328)
Q Consensus        19 ~~~~~~~ilI~GatG~iG~~l~~~L~~~   46 (328)
                      ....+++|.|.| +|.+|+..++.|.+.
T Consensus         3 ~~~~k~kv~iIG-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           3 TNSGKFGVVVVG-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCCCSEEEEEEC-CSHHHHHHHHHHTSH
T ss_pred             CCCCCcEEEEEc-CCHHHHHHHHHHHhC
Confidence            344567999999 699999998888753

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.52  E-value=0.094  Score=35.32  Aligned_cols=36  Identities=25%  Similarity=0.340  Sum_probs=28.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~   58 (328)
                      .+++++|.|| |++|-.++..|.+   +|.+|+++.|.+.
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            3579999995 9999999966554   4678999988654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.50  E-value=0.13  Score=40.55  Aligned_cols=36  Identities=19%  Similarity=0.207  Sum_probs=31.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      ...++|+|-| .|-+|+++++.|.+.|.+|++++-+.
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~~   69 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGESD   69 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEccc
Confidence            3557999999 79999999999999999999887654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.23  E-value=0.054  Score=42.97  Aligned_cols=34  Identities=29%  Similarity=0.319  Sum_probs=31.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      +|+|.|| |..|..++..|.+.|++|.++.|++..
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~~   37 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTPD   37 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            6999995 999999999999999999999998643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.13  E-value=0.08  Score=38.63  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      ..++|+|.| +|++|-.++..|.+.|.++.++.+.+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            356899999 59999999999999998876665544

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=92.02  E-value=0.22  Score=34.41  Aligned_cols=65  Identities=12%  Similarity=-0.010  Sum_probs=43.0

Q ss_pred             CCCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      .+++|.|+|||   +-.|..+++.|++.||+++.+--++.. ...         .  ...-..++.++-..+|.|+-+..
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i---------~--g~~~~~~l~~i~~~iD~v~v~~p   79 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EEL---------F--GEEAVASLLDLKEPVDILDVFRP   79 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEE---------T--TEECBSSGGGCCSCCSEEEECSC
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-cee---------e--ceecccchhhccCCCceEEEecc
Confidence            45789999998   579999999999999999876433211 111         0  11122334444457898888853

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.11  Score=38.82  Aligned_cols=33  Identities=21%  Similarity=0.408  Sum_probs=28.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      |||+++| ++..|..+.+.|++.||+|.++...+
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            7899998 68899999999999999998776543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.86  E-value=0.081  Score=40.56  Aligned_cols=32  Identities=28%  Similarity=0.315  Sum_probs=29.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      |+|+| +|.-|...+..|.++|++|.++.+++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            89999 699999999999999999999999864

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.71  E-value=0.043  Score=41.90  Aligned_cols=73  Identities=11%  Similarity=0.151  Sum_probs=42.8

Q ss_pred             CCCeEEEEcCCchhHH-HHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           22 SQMTVSVTGATGFIGR-RLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      .+-+|.|+| +|.+|+ ++++.+... +.+|+++ +|++.+.........   .....+...++++++++  ++|+|+-+
T Consensus        32 ~~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~---i~~~~~~~~~d~~ell~~~~iD~V~I~  107 (221)
T d1h6da1          32 RRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG---VDPRKIYDYSNFDKIAKDPKIDAVYII  107 (221)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT---CCGGGEECSSSGGGGGGCTTCCEEEEC
T ss_pred             CCEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc---cccccccccCchhhhcccccceeeeec
Confidence            345899999 699996 566766654 5777755 555544443322110   11112223455666664  68999887


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      ..
T Consensus       108 tp  109 (221)
T d1h6da1         108 LP  109 (221)
T ss_dssp             SC
T ss_pred             cc
Confidence            54

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.65  E-value=0.23  Score=39.34  Aligned_cols=37  Identities=22%  Similarity=0.142  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      +-|.+=--.||..|.+|++.++.+|++|+.+.+..+-
T Consensus        36 pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s~   72 (290)
T d1p9oa_          36 PVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSA   72 (290)
T ss_dssp             CSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred             CceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence            4566666778999999999999999999999877543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.65  E-value=0.095  Score=41.18  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=29.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      |+|+| +|..|..++.+|.++|++|+++.+...
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            89999 599999999999999999999998654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.62  E-value=0.15  Score=34.18  Aligned_cols=37  Identities=19%  Similarity=0.229  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCc
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSK   59 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~   59 (328)
                      .+++++|.| .|++|-.++..|.+   .|.+|+++.|.+.-
T Consensus        17 ~p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          17 APKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             cCCeEEEEC-CChHHHHHHHHhHhhcccccccceecccccc
Confidence            357999999 59999999976554   48899999987643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.50  E-value=0.048  Score=40.02  Aligned_cols=33  Identities=21%  Similarity=0.227  Sum_probs=26.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR   55 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   55 (328)
                      |+.+|+|+| +|++|-.++..|.+.|+++.++.+
T Consensus         2 m~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            345799999 699999999999998876555544

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=91.40  E-value=0.21  Score=36.87  Aligned_cols=93  Identities=17%  Similarity=0.183  Sum_probs=56.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCC-----CCc---cccCceee--------cCChhhH
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG-----KKT---RFFPGVMI--------AEEPQWR   84 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~-----~~~---~~~~~~d~--------~~~~~~~   84 (328)
                      |||.|+| -|.-|..++.+|.+.+.   +.+++..+..........     +..   ....+.|.        .+.+.+.
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~   79 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIR   79 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHH
Confidence            5899999 69999999999998763   555555543322211110     000   00011111        1556788


Q ss_pred             hhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           85 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        85 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +.+++.|.||-+||..+..             -.-++--+++.+++
T Consensus        80 ~~l~~~d~vfi~AGlGGgT-------------GtgaapviA~~ake  112 (194)
T d1w5fa1          80 EVLQDTHMVFITAGFGGGT-------------GTGASPVIAKIAKE  112 (194)
T ss_dssp             HHTTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHH
T ss_pred             HHhcCCCeEEEEEecCCCc-------------ccchHHHHHHHHHH
Confidence            8899999999999975331             12334467788888

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.31  E-value=0.04  Score=40.65  Aligned_cols=69  Identities=17%  Similarity=0.282  Sum_probs=42.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccC-ceeecCChhhHhhc--CCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFP-GVMIAEEPQWRDCI--QGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~--~~~d~vi~~a~   98 (328)
                      +||.|+| +|.+|+..++.|... +.+|+++ ++++.+.........   .. ...+  .+++++++  .++|+|+-+..
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~---~~~~~~~--~~~~~~ll~~~~iD~v~I~tp   75 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN---YPESTKI--HGSYESLLEDPEIDALYVPLP   75 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT---CCTTCEE--ESSHHHHHHCTTCCEEEECCC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc---cccceee--cCcHHHhhhccccceeeeccc
Confidence            6899999 699999999999875 5788765 555443332221100   11 1111  23455555  36899997753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.25  E-value=0.099  Score=41.64  Aligned_cols=32  Identities=22%  Similarity=0.509  Sum_probs=29.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      +|+|+| +|.+|..++.+|.++|+ +|+++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            699999 59999999999999995 699999875

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=91.17  E-value=0.12  Score=37.26  Aligned_cols=32  Identities=28%  Similarity=0.511  Sum_probs=27.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      |||.|=| -|.||+.+.+.|.+++.+|.++.-.
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~   32 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL   32 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC
Confidence            6899998 7999999999999999988877543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.15  Score=41.21  Aligned_cols=36  Identities=22%  Similarity=0.283  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      +..||+|+| +|.-|-.-+..|.++|++|+++-.+..
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            346899999 599999999999999999999977653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.93  E-value=0.1  Score=39.81  Aligned_cols=26  Identities=35%  Similarity=0.492  Sum_probs=23.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeE
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQV   50 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V   50 (328)
                      |||+|+| +|.+|...+.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            7899999 5999999999999999754

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=90.73  E-value=1.4  Score=29.11  Aligned_cols=39  Identities=15%  Similarity=0.025  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCccc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   61 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   61 (328)
                      .-||+|-|-||..|+.-+++.++.|-+|.+-........
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~   44 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT   44 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTE
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCc
Confidence            348999999999999999999999999987776554433

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=90.73  E-value=0.23  Score=37.06  Aligned_cols=35  Identities=17%  Similarity=0.208  Sum_probs=29.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      .+|||+++| ++..+..+.+.|++.|++|.++...+
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            358999998 68899999999999999987766544

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.45  E-value=0.29  Score=36.52  Aligned_cols=95  Identities=17%  Similarity=0.185  Sum_probs=56.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCC-----CC---ccccCcee--------ecCChh
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG-----KK---TRFFPGVM--------IAEEPQ   82 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~-----~~---~~~~~~~d--------~~~~~~   82 (328)
                      ...||.|+| -|.-|..++.+|.+.|.   +.+++..+..........     ..   .....+.|        ..+.+.
T Consensus        14 ~~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~   92 (209)
T d2vapa1          14 TKAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEE   92 (209)
T ss_dssp             TCCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHH
T ss_pred             cCCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHHHHH
Confidence            456899999 69999999999998764   445555543222211100     00   00000111        114567


Q ss_pred             hHhhcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           83 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        83 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      +.+.++++|.||-+||..+..             -..++--+++.+++
T Consensus        93 I~~~l~~~d~vfi~AGlGGGT-------------Gsgaapvia~~ake  127 (209)
T d2vapa1          93 IKAAIQDSDMVFITCGLGGGT-------------GTGSAPVVAEISKK  127 (209)
T ss_dssp             HHHHHTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHH
T ss_pred             HHHhccCCCEEEEEEeCCCCc-------------cccHHHHHHHHHHH
Confidence            888899999999999975331             12234457778887

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.43  E-value=0.15  Score=36.40  Aligned_cols=31  Identities=26%  Similarity=0.402  Sum_probs=26.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      ||+|.| .|++|-.++..|.+ +.+|+++.+.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~-~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQ-TYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHHc-CCCEEEEeccc
Confidence            799999 59999999999864 78999998765

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.32  E-value=0.1  Score=37.57  Aligned_cols=67  Identities=19%  Similarity=0.184  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      +.++|.|+| -|-.|++-+.-|.+.|.+|++--|..++..+....      .+++   .-++.++.+..|+|..+..
T Consensus        15 k~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~------~Gf~---v~~~~eA~~~aDiim~L~P   81 (182)
T d1np3a2          15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA------HGLK---VADVKTAVAAADVVMILTP   81 (182)
T ss_dssp             HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH------TTCE---EECHHHHHHTCSEEEECSC
T ss_pred             CCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhh------hccc---cccHHHHhhhcCeeeeecc
Confidence            357999999 89999999999999999999888876654332221      1123   3457788889999999863

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=90.29  E-value=0.096  Score=37.77  Aligned_cols=68  Identities=15%  Similarity=0.159  Sum_probs=39.7

Q ss_pred             CeEEEEcCCchhHHH-HHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCC
Q 020254           24 MTVSVTGATGFIGRR-LVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG   98 (328)
Q Consensus        24 ~~ilI~GatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   98 (328)
                      |||.|+| +|.+|+. ....|.+. +.++.++++++...........   ... -+.|.+++.+  .++|+|+-+..
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~-~~~~~~~ll~--~~iD~V~I~tp   71 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR---VSA-TCTDYRDVLQ--YGVDAVMIHAA   71 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT---CCC-CCSSTTGGGG--GCCSEEEECSC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc---ccc-ccccHHHhcc--cccceeccccc
Confidence            6899999 6888876 56666655 4677777777655444332111   111 1223333322  37899988753

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.89  E-value=0.36  Score=35.40  Aligned_cols=25  Identities=36%  Similarity=0.541  Sum_probs=22.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN   47 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g   47 (328)
                      |+|||.|-| -|.||+.+.+.+++++
T Consensus         1 M~ikigING-FGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           1 MPIKVGING-FGRIGRMVFQALCEDG   25 (190)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEC-CChHHHHHHHHHHHcC
Confidence            457999999 8999999999998764

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.77  E-value=0.6  Score=35.58  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=29.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSR   57 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~   57 (328)
                      ...++|+|-| .|-+|+++++.|.+ .|..|++++-+.
T Consensus        30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~~   66 (239)
T d1gtma1          30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDSK   66 (239)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccccc
Confidence            3567999999 69999999999986 589998886653

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.75  E-value=1.4  Score=29.55  Aligned_cols=64  Identities=19%  Similarity=0.135  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA   97 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a   97 (328)
                      .-||+|-|-||..|+.-+++.++.|-+|.+-+..........         .+-+.|  +++++.+  ++|+-+-+.
T Consensus        15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~---------giPVf~--tV~eA~~~~~~daSvIfV   80 (130)
T d1euca1          15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHL---------GLPVFN--TVKEAKEQTGATASVIYV   80 (130)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---------TEEEES--SHHHHHHHHCCCEEEECC
T ss_pred             CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCcccc---------Cccchh--hHHHHHHhcCCcEEEEec
Confidence            458999999999999999999999999988776655433322         233332  3455543  677655553

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.61  E-value=0.27  Score=33.98  Aligned_cols=36  Identities=25%  Similarity=0.416  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH----hCCCeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQ----ADNHQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~----~~g~~V~~~~r~~~~   59 (328)
                      .++|+|.|| |++|-.++..|.    +.|.+|+.+.+.+..
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~   76 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGN   76 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence            568999995 999999998885    358999999887653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.46  E-value=0.74  Score=39.70  Aligned_cols=34  Identities=12%  Similarity=0.218  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   57 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~   57 (328)
                      ..+|+|+|+ |.+|..+++.|...|. ++++++.+.
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            468999995 7899999999999994 788887653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.13  E-value=0.2  Score=38.65  Aligned_cols=33  Identities=24%  Similarity=0.380  Sum_probs=29.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   58 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   58 (328)
                      +|+|+| +|.-|-..+..|.++|+ +|+++.+++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            699999 59999999999999995 7999988754

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=88.91  E-value=1.9  Score=28.57  Aligned_cols=63  Identities=14%  Similarity=0.186  Sum_probs=43.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEECC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA   97 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a   97 (328)
                      -||+|-|-||..|+.-+++.++.|-+|.+-...........         .+-+.|  +++++.+  ++|+-+-+.
T Consensus         8 trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~---------giPVf~--tV~eAv~~~~~d~SvIfV   72 (121)
T d1oi7a1           8 TRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL---------GVPVYD--TVKEAVAHHEVDASIIFV   72 (121)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---------TEEEES--SHHHHHHHSCCSEEEECC
T ss_pred             CcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE---------CCchHh--hHHHHHHhcCCeEEEEee
Confidence            48999999999999999999999999988777655433322         233332  3444443  677655553

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=87.84  E-value=0.44  Score=34.32  Aligned_cols=31  Identities=19%  Similarity=0.433  Sum_probs=24.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC----CeEEEEec
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN----HQVRVLTR   55 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r   55 (328)
                      |||.|=| -|.||+.+.+.+++++    .+|.++.-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd   36 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND   36 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence            6899999 8999999999998743    45655543

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.66  E-value=0.18  Score=42.01  Aligned_cols=32  Identities=28%  Similarity=0.361  Sum_probs=24.5

Q ss_pred             CeEEEEcC------CchhH---HHHHHHHHhCCCeEEEEec
Q 020254           24 MTVSVTGA------TGFIG---RRLVQRLQADNHQVRVLTR   55 (328)
Q Consensus        24 ~~ilI~Ga------tG~iG---~~l~~~L~~~g~~V~~~~r   55 (328)
                      ||||+++.      +|.+|   ..|++.|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            67888663      34444   6779999999999999874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.63  E-value=0.45  Score=36.44  Aligned_cols=36  Identities=22%  Similarity=0.288  Sum_probs=31.5

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      ...++|+|-| .|-+|+++++.|.+.|.+|++++...
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeeccc
Confidence            3567999999 89999999999999999999887653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.41  E-value=0.67  Score=32.59  Aligned_cols=37  Identities=16%  Similarity=0.028  Sum_probs=30.4

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   58 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   58 (328)
                      ...++|+|+| .|.+|--.+..+++.|. .|+++.|++.
T Consensus        43 ~~~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          43 SIRGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CCCSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             cCCCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            3456899999 59999999999999985 6888887654

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=87.25  E-value=0.22  Score=40.29  Aligned_cols=74  Identities=8%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh-CC-CeEEEEecCCCcccccCCCCCccccCceeecCChhhHhhcCCCcEEEECCCC
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQA-DN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT   99 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~-~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   99 (328)
                      .+++.|+| +|..+...++.+.. .+ .+|++.+|++.+.........  ...++++.-.++++++++++|+|+-+.+.
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~--~~~g~~v~~~~s~~eav~~ADIi~t~Tas  203 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLK--EYSGLTIRRASSVAEAVKGVDIITTVTAD  203 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHT--TCTTCEEEECSSHHHHHTTCSEEEECCCC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhh--hccCCCceecCCHHHHHhcCCceeecccc
Confidence            46899999 79999999988865 44 589999999876554432110  02345666677899999999999987653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.21  E-value=1.2  Score=33.64  Aligned_cols=36  Identities=25%  Similarity=0.321  Sum_probs=29.8

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSR   57 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~   57 (328)
                      ...++|+|-| .|-+|+++++.|.+ .|..|++++-+.
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~~   65 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSR   65 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEETT
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecCC
Confidence            3567999998 89999999999975 599998887543

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=87.19  E-value=0.3  Score=37.30  Aligned_cols=75  Identities=11%  Similarity=0.089  Sum_probs=42.2

Q ss_pred             cccCCCeEEEEcCC---chhHHHHHHHHHhC--CCeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcC--CC
Q 020254           19 QKASQMTVSVTGAT---GFIGRRLVQRLQAD--NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GS   90 (328)
Q Consensus        19 ~~~~~~~ilI~Gat---G~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~   90 (328)
                      ++..++||.|+|..   |+++..-+..+.+.  +.+|+++ ++++...........   ..  +....++++++++  ++
T Consensus        12 ~~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~---~~--~~~~~~~~~~l~~~~~i   86 (237)
T d2nvwa1          12 PSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQ---LK--HATGFDSLESFAQYKDI   86 (237)
T ss_dssp             GGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTT---CT--TCEEESCHHHHHHCTTC
T ss_pred             CCCCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcc---cc--cceeecchhhccccccc
Confidence            34556899999964   46777666667653  5788865 444443332221100   11  1112345556663  68


Q ss_pred             cEEEECCC
Q 020254           91 TAVVNLAG   98 (328)
Q Consensus        91 d~vi~~a~   98 (328)
                      |+|+-+..
T Consensus        87 D~V~i~tp   94 (237)
T d2nvwa1          87 DMIVVSVK   94 (237)
T ss_dssp             SEEEECSC
T ss_pred             ceeeccCC
Confidence            89988853

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=87.12  E-value=0.29  Score=39.94  Aligned_cols=31  Identities=26%  Similarity=0.250  Sum_probs=28.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      -|+|+| +|+-|..++.+|.+.|++|.++-+-
T Consensus         4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            389999 7999999999999999999999884

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.77  E-value=0.33  Score=39.04  Aligned_cols=32  Identities=28%  Similarity=0.331  Sum_probs=29.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      |+|+| +|.-|-..+..|.++|++|+++.++..
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~~   33 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARDR   33 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            78999 599999999999999999999988664

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.57  E-value=0.4  Score=38.07  Aligned_cols=34  Identities=32%  Similarity=0.457  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      ..|+|+|| |.-|-..+.+|.+.|.+|+++.+.+.
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            46999994 99999999999999999999998765

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.74  E-value=0.48  Score=37.97  Aligned_cols=33  Identities=30%  Similarity=0.406  Sum_probs=23.1

Q ss_pred             CeEEEEcC-Cc-hh--HHHHHHHHHhCCCeEEEEecC
Q 020254           24 MTVSVTGA-TG-FI--GRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        24 ~~ilI~Ga-tG-~i--G~~l~~~L~~~g~~V~~~~r~   56 (328)
                      |||+|++| || -+  +.+|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57888764 32 22  224889999999999887754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.08  E-value=0.43  Score=36.84  Aligned_cols=35  Identities=17%  Similarity=0.199  Sum_probs=30.9

Q ss_pred             cCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 020254           21 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        21 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      .+.++|+|-| .|-+|+++++.|.+.|.+|++++-+
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            3457999999 7999999999999999999988764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=85.08  E-value=0.15  Score=37.19  Aligned_cols=68  Identities=16%  Similarity=0.217  Sum_probs=39.8

Q ss_pred             CCeEEEEcCCchhHHH-HHHHHHhCC--CeEEEE-ecCCCcccccCCCCCccccCceeecCChhhHhhcC--CCcEEEEC
Q 020254           23 QMTVSVTGATGFIGRR-LVQRLQADN--HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL   96 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   96 (328)
                      ++||.|.| +|.+|+. .++.+.+.+  .+|+++ ++++.........     +....+  .++++++++  ++|+|+-+
T Consensus         3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~-----~~~~~~--~~~~~ell~~~~id~v~I~   74 (181)
T d1zh8a1           3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM-----VGNPAV--FDSYEELLESGLVDAVDLT   74 (181)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH-----HSSCEE--ESCHHHHHHSSCCSEEEEC
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcc-----ccccce--eeeeeccccccccceeecc
Confidence            46899999 6999986 467776643  477755 5544433322211     111111  244566664  68999987


Q ss_pred             CC
Q 020254           97 AG   98 (328)
Q Consensus        97 a~   98 (328)
                      ..
T Consensus        75 tp   76 (181)
T d1zh8a1          75 LP   76 (181)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.02  E-value=0.46  Score=38.22  Aligned_cols=35  Identities=26%  Similarity=0.406  Sum_probs=29.7

Q ss_pred             eEEEEcCCchhHHHHHHHHH-----hCCCeEEEEecCCCcc
Q 020254           25 TVSVTGATGFIGRRLVQRLQ-----ADNHQVRVLTRSRSKA   60 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~   60 (328)
                      =|+|.|| |-.|..++..|.     ++|++|+++.|++...
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~   48 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV   48 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCCC
Confidence            3999995 999999999996     4799999999976543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.83  E-value=0.52  Score=35.90  Aligned_cols=34  Identities=21%  Similarity=0.194  Sum_probs=30.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCc
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   59 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   59 (328)
                      -|+|+| +|..|...+..|.+.|++|.++.+++..
T Consensus         4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            389999 5999999999999999999999987653

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.28  E-value=1.8  Score=31.69  Aligned_cols=92  Identities=15%  Similarity=0.186  Sum_probs=56.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCC----c----cccCceee--------cCChhhHh
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKK----T----RFFPGVMI--------AEEPQWRD   85 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~----~----~~~~~~d~--------~~~~~~~~   85 (328)
                      +|.|+| -|.-|..++.+|.+.+.   +.+++..+............    .    ......|.        .+.+.+.+
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~   81 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE   81 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            578888 69999999999998863   56666655433322111000    0    00001111        15567888


Q ss_pred             hcCCCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhc
Q 020254           86 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  130 (328)
Q Consensus        86 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (328)
                      .+++.|.||-+||..+..             -.-++--+++.+++
T Consensus        82 ~l~~~d~vfi~AGlGGGT-------------GtgaapviA~~ake  113 (198)
T d1ofua1          82 VLEGADMVFITTGMGGGT-------------GTGAAPIIAEVAKE  113 (198)
T ss_dssp             HHTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHH
T ss_pred             HhCCCCeEEEEecCCCCc-------------cccHHHHHHHHHHH
Confidence            899999999999975331             12233457788888

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.13  E-value=0.57  Score=35.22  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK   59 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   59 (328)
                      .||+|+| +|--|-..+..|.+.  |++|+++.+.+..
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~~   38 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLVP   38 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence            4899999 699999999999764  7999999887653

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=83.83  E-value=0.56  Score=33.57  Aligned_cols=30  Identities=23%  Similarity=0.364  Sum_probs=26.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTR   55 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   55 (328)
                      ||.|-| -|.||+.+.+.+++++.+|.++--
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            688888 899999999999999888877754

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=83.40  E-value=0.82  Score=32.81  Aligned_cols=31  Identities=26%  Similarity=0.493  Sum_probs=24.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC---CeEEEEec
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN---HQVRVLTR   55 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r   55 (328)
                      |||.|-| -|.||+.+.+.++++.   .+|+++--
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd   34 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIND   34 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcC
Confidence            5899999 8999999999988753   45665543

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.88  E-value=0.86  Score=32.54  Aligned_cols=34  Identities=24%  Similarity=0.450  Sum_probs=26.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--C--eEEEEecC
Q 020254           22 SQMTVSVTGATGFIGRRLVQRLQADN--H--QVRVLTRS   56 (328)
Q Consensus        22 ~~~~ilI~GatG~iG~~l~~~L~~~g--~--~V~~~~r~   56 (328)
                      ++.+|.|+| .|.+|+.+++.|.++.  .  +|.++..+
T Consensus         3 k~i~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s   40 (168)
T d1ebfa1           3 KVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEA   40 (168)
T ss_dssp             SEEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred             CEEEEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEe
Confidence            456899998 8999999999999753  2  55555543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.61  E-value=0.62  Score=37.75  Aligned_cols=31  Identities=23%  Similarity=0.365  Sum_probs=28.4

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 020254           26 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   57 (328)
Q Consensus        26 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~   57 (328)
                      |+|+| +|.-|..++.+|.+.|++|.++-+..
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecCC
Confidence            89999 79999999999999999999997753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.40  E-value=0.67  Score=36.56  Aligned_cols=33  Identities=18%  Similarity=0.215  Sum_probs=30.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   58 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   58 (328)
                      =|+|+| +|..|-..+..|.++|.+|.++.+.+.
T Consensus        18 DVlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~~   50 (308)
T d1y0pa2          18 DVVVVG-SGGAGFSAAISATDSGAKVILIEKEPV   50 (308)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            399999 699999999999999999999988754

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=82.21  E-value=0.62  Score=37.92  Aligned_cols=31  Identities=19%  Similarity=0.310  Sum_probs=28.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 020254           25 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        25 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      -|+|+| +|+-|..++.+|.+.|++|.++-+-
T Consensus         9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            389999 7999999999999999999999874

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.89  E-value=0.82  Score=38.67  Aligned_cols=31  Identities=29%  Similarity=0.307  Sum_probs=23.2

Q ss_pred             CeEEEEcC-------CchhH---HHHHHHHHhCCCeEEEEe
Q 020254           24 MTVSVTGA-------TGFIG---RRLVQRLQADNHQVRVLT   54 (328)
Q Consensus        24 ~~ilI~Ga-------tG~iG---~~l~~~L~~~g~~V~~~~   54 (328)
                      |||+.+..       +|.+|   .+|+++|.++||+|++++
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            56666543       36655   678999999999999985

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.44  E-value=0.49  Score=35.66  Aligned_cols=36  Identities=14%  Similarity=0.108  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCCCc
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK   59 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~   59 (328)
                      +.||+|+| +|--|-..+.+|+++|       ++|+++.+.+..
T Consensus         2 p~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~   44 (239)
T d1lqta2           2 PYYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP   44 (239)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred             CcEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCCCC
Confidence            35899999 6999999999999987       479999987754

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.36  E-value=1.7  Score=34.02  Aligned_cols=100  Identities=11%  Similarity=0.134  Sum_probs=58.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh----CCC-------eEEEEecCCCccccc--CCCCCccccCcee-ecCChhhHhhcC-
Q 020254           24 MTVSVTGATGFIGRRLVQRLQA----DNH-------QVRVLTRSRSKAELI--FPGKKTRFFPGVM-IAEEPQWRDCIQ-   88 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~----~g~-------~V~~~~r~~~~~~~~--~~~~~~~~~~~~d-~~~~~~~~~~~~-   88 (328)
                      .||+|.|| |--|-.+++.|..    .|.       +|+.++++..-....  .....+..+.+-+ -....++.++++ 
T Consensus        26 ~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~a~~~~~~~~~~L~e~i~~  104 (294)
T d1pj3a1          26 HKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNI  104 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHH
T ss_pred             cEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHhhccccccchhHHHHHHHh
Confidence            47999994 8888888877654    342       699999865321111  0011111122111 112346777776 


Q ss_pred             -CCcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           89 -GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        89 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                       ++|++|-+.+..+.                 .++.+++.+.+  .+.+.+||-=|
T Consensus       105 ~kptvliG~S~~~g~-----------------ft~evi~~Ma~--~~~~PIIFaLS  141 (294)
T d1pj3a1         105 LKPSTIIGVAGAGRL-----------------FTPDVIRAMAS--INERPVIFALS  141 (294)
T ss_dssp             HCCSEEEECCCSSCC-----------------SCHHHHHHHHH--HCSSCEEEECC
T ss_pred             cCCceEEEecCCCCc-----------------CCHHHHHHHHh--cCCCcEEEEcc
Confidence             89999999875322                 23567777766  56678887654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.96  E-value=0.73  Score=35.23  Aligned_cols=36  Identities=17%  Similarity=0.186  Sum_probs=31.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCcc
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   60 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   60 (328)
                      .-|+|+| +|--|-..+..|.++|++|.++.+.+...
T Consensus         5 ~DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           5 SENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            3599999 59999999999999999999999987543

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=80.55  E-value=1.7  Score=30.77  Aligned_cols=31  Identities=23%  Similarity=0.419  Sum_probs=26.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEec
Q 020254           24 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR   55 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r   55 (328)
                      |||.|-| -|.||+.+.+.++++. .+|.++.-
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd   33 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND   33 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC
Confidence            5899999 8999999999999875 67776654

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.54  E-value=1.5  Score=32.46  Aligned_cols=69  Identities=20%  Similarity=0.150  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC------CCeEEEEecCCCcccccCCCCCccccCceeecC--ChhhHhhcCCCcEEE
Q 020254           23 QMTVSVTGATGFIGRRLVQRLQAD------NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDCIQGSTAVV   94 (328)
Q Consensus        23 ~~~ilI~GatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~d~vi   94 (328)
                      +++|.|+| -|-.|++-+.-|.+.      |.+|++--|..++........      +....+  .-++.++.+..|+|.
T Consensus        44 ~KkIaViG-YGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~d------Gf~v~~~~v~~v~EAv~~ADiVm  116 (226)
T d1qmga2          44 IKQIGVIG-WGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAA------GFSEENGTLGDMWETISGSDLVL  116 (226)
T ss_dssp             CSEEEEEC-CSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHT------TCCGGGTCEEEHHHHHHTCSEEE
T ss_pred             CCEEEEEE-eccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHc------CCccCCCcccCHHHHHhhCCEEE
Confidence            47899999 899999999999994      466777667665443332211      122222  225667888899999


Q ss_pred             ECCC
Q 020254           95 NLAG   98 (328)
Q Consensus        95 ~~a~   98 (328)
                      .++.
T Consensus       117 iLlP  120 (226)
T d1qmga2         117 LLIS  120 (226)
T ss_dssp             ECSC
T ss_pred             Eecc
Confidence            9963

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=80.51  E-value=5  Score=25.30  Aligned_cols=34  Identities=15%  Similarity=0.183  Sum_probs=24.8

Q ss_pred             CCeEEEE-cCCc-------hhHHHHHHHHHhCCCeEEEEecC
Q 020254           23 QMTVSVT-GATG-------FIGRRLVQRLQADNHQVRVLTRS   56 (328)
Q Consensus        23 ~~~ilI~-GatG-------~iG~~l~~~L~~~g~~V~~~~r~   56 (328)
                      ++||+|+ ||.+       .-|.++.+.|.+.||+|+.++..
T Consensus         2 ~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~   43 (96)
T d1iowa1           2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK   43 (96)
T ss_dssp             CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCc
Confidence            4566665 4444       56889999999999999877543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=80.25  E-value=0.78  Score=33.96  Aligned_cols=31  Identities=19%  Similarity=0.063  Sum_probs=24.1

Q ss_pred             CeEEEEcCCch-----hHHHHHHHHHhCCCeEEEEe
Q 020254           24 MTVSVTGATGF-----IGRRLVQRLQADNHQVRVLT   54 (328)
Q Consensus        24 ~~ilI~GatG~-----iG~~l~~~L~~~g~~V~~~~   54 (328)
                      |+++|+|-...     +-..|+..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            68999994324     44578888889999998885

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=80.22  E-value=3  Score=32.51  Aligned_cols=99  Identities=12%  Similarity=0.126  Sum_probs=56.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC----C-------CeEEEEecCCCcccccCCC-CCccccCceeecCChhhHhhcC--C
Q 020254           24 MTVSVTGATGFIGRRLVQRLQAD----N-------HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ--G   89 (328)
Q Consensus        24 ~~ilI~GatG~iG~~l~~~L~~~----g-------~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~--~   89 (328)
                      .||+|.| .|--|-.+++.|...    |       .+|++++|..--....... .....+. .+..+...+.++++  +
T Consensus        26 ~kiV~~G-AGsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a-~~~~~~~~l~~~i~~vk  103 (298)
T d1gq2a1          26 HTVLFQG-AGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFA-HEHCEMKNLEDIVKDIK  103 (298)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGC-BSCCCCCCHHHHHHHHC
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHH-HHhhhhhhhHHHhhccC
Confidence            4899999 588888888887632    3       3799999864322111100 0000111 12223345555554  5


Q ss_pred             CcEEEECCCCCCCCCCChhHHHHHHHhhhhhHHHHHHHHhcCCCCCCcEEEEec
Q 020254           90 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  143 (328)
Q Consensus        90 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~Ss  143 (328)
                      +++++-+.+..+.                 .++.+++.+.+  ...+.+||-=|
T Consensus       104 ptvliG~s~~~g~-----------------ft~evv~~ma~--~~~~PIIFaLS  138 (298)
T d1gq2a1         104 PTVLIGVAAIGGA-----------------FTQQILQDMAA--FNKRPIIFALS  138 (298)
T ss_dssp             CSEEEECSCCTTC-----------------SCHHHHHHHHH--HCSSCEEEECC
T ss_pred             hheeEecccccCc-----------------CCHHHHHHHHh--hCCCCEEEEcc
Confidence            8899998775322                 13456666666  45677877654